BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (282 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P37767 Uncharacterized HTH-type transcriptional regulat... 575 e-163 UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n... 192 1e-47 UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteur... 191 2e-47 UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n... 188 2e-46 UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enteroba... 179 8e-44 UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n... 174 2e-42 UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Provide... 172 1e-41 UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=P... 171 2e-41 UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=G... 168 2e-40 UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium ... 165 1e-39 UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax... 161 3e-38 UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=S... 158 2e-37 UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=A... 149 2e-34 UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=S... 141 3e-32 UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photoba... 140 7e-32 UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=A... 136 8e-31 UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 133 9e-30 UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostri... 131 3e-29 UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=B... 130 7e-29 UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=... 128 3e-28 UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=H... 125 1e-27 UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=... 125 2e-27 UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hy... 124 4e-27 UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collins... 122 2e-26 UniRef50_P26833 Uncharacterized HTH-type transcriptional regulat... 120 6e-26 UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus ... 119 8e-26 UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=... 119 9e-26 UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax... 119 1e-25 UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Er... 118 2e-25 UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator... 117 4e-25 UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=D... 117 4e-25 UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=K... 117 5e-25 UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Ac... 117 5e-25 UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putativ... 117 6e-25 UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonel... 117 6e-25 UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteri... 117 6e-25 UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rh... 116 7e-25 UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales Re... 116 9e-25 UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=B... 116 1e-24 UniRef50_P44540 Uncharacterized HTH-type transcriptional regulat... 115 2e-24 UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteri... 114 3e-24 UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=T... 114 4e-24 UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III... 114 5e-24 UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Ba... 113 7e-24 UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus ... 113 9e-24 UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=E... 112 2e-23 UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostri... 111 2e-23 UniRef50_Q184N2 Putative phosphosugar-binding transcriptional re... 110 4e-23 UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=F... 110 5e-23 UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium bu... 110 5e-23 UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=A... 110 6e-23 UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=S... 110 7e-23 UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus ... 109 9e-23 UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=C... 109 1e-22 UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp... 109 1e-22 UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseria... 109 1e-22 UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator ... 109 1e-22 UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR... 109 1e-22 UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=P... 109 1e-22 UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostri... 108 1e-22 UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=G... 108 2e-22 UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, ... 108 2e-22 UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=L... 108 3e-22 UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopo... 108 3e-22 UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=S... 107 4e-22 UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulat... 107 4e-22 UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus ... 107 4e-22 UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=A... 107 6e-22 UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulat... 107 6e-22 UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=G... 106 8e-22 UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=B... 105 2e-21 UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=E... 105 2e-21 UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=A... 105 2e-21 UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=A... 105 2e-21 UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdema... 104 3e-21 UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n... 104 3e-21 UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=... 104 4e-21 UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oen... 104 4e-21 UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=B... 103 5e-21 UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=A... 103 5e-21 UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=T... 103 6e-21 UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus ... 103 6e-21 UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n... 103 7e-21 UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, ... 103 8e-21 UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=C... 103 9e-21 UniRef50_D2AR91 Putative transcriptional regulator, RpiR family ... 103 9e-21 UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=... 102 1e-20 UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. ... 102 1e-20 UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulat... 102 1e-20 UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=B... 102 1e-20 UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=P... 102 2e-20 UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulat... 102 2e-20 UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=P... 101 2e-20 UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=P... 101 2e-20 UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus ... 101 2e-20 UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n... 101 3e-20 UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=C... 101 3e-20 UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor... 101 3e-20 UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Sta... 100 4e-20 UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=L... 100 4e-20 UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax... 100 6e-20 UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=P... 100 7e-20 UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=K... 100 8e-20 UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostri... 99 1e-19 UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=T... 99 2e-19 UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=B... 99 2e-19 UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=G... 98 3e-19 UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=... 98 4e-19 UniRef50_B9K581 Transcriptional repressor of rpiB expression; tr... 97 7e-19 UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacte... 97 8e-19 UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=B... 97 8e-19 UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulat... 96 1e-18 UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n... 96 1e-18 UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n... 96 2e-18 UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus la... 95 2e-18 UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillu... 95 3e-18 UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulat... 94 4e-18 UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=... 94 5e-18 UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales ... 93 8e-18 UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n... 93 9e-18 UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=L... 93 1e-17 UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collins... 93 1e-17 UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio Rep... 92 1e-17 UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus ... 92 1e-17 UniRef50_B9DLT1 Truncated putative RpiR family transcriptional r... 92 2e-17 UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=E... 92 2e-17 UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulat... 92 2e-17 UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus si... 92 2e-17 UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=D... 92 2e-17 UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator... 92 2e-17 UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=At... 92 3e-17 UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=St... 92 3e-17 UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteri... 91 3e-17 UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocace... 91 3e-17 UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=L... 91 3e-17 UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillac... 91 4e-17 UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1... 91 4e-17 UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmone... 91 4e-17 UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=R... 91 4e-17 UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=A... 90 7e-17 UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_... 90 9e-17 UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales ... 90 9e-17 UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enteroco... 89 1e-16 UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio ... 89 1e-16 UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus ... 89 2e-16 UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, ... 89 2e-16 UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=F... 89 2e-16 UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=B... 89 2e-16 UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=... 89 2e-16 UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=B... 89 2e-16 UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus ... 89 2e-16 UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus ... 89 2e-16 UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostri... 88 3e-16 UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=C... 88 4e-16 UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostri... 87 6e-16 UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostri... 87 6e-16 UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, ... 87 7e-16 UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATC... 87 7e-16 UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=P... 87 8e-16 UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=S... 86 1e-15 UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=At... 86 1e-15 UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=... 84 5e-15 UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=L... 84 5e-15 UniRef50_P46117 Uncharacterized HTH-type transcriptional regulat... 84 7e-15 UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=F... 84 7e-15 UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=K... 84 7e-15 UniRef50_A6M2X4 Transcriptional regulator, RpiR family n=4 Tax=C... 84 7e-15 UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=La... 84 7e-15 UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID... 84 7e-15 UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttle... 84 8e-15 UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n... 84 8e-15 UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostri... 83 8e-15 UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostri... 83 8e-15 UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Cl... 83 1e-14 UniRef50_D1AP79 Transcriptional regulator, RpiR family n=1 Tax=S... 83 1e-14 UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=B... 83 1e-14 UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=... 82 1e-14 UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=A... 82 1e-14 UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=P... 82 2e-14 UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Sta... 82 2e-14 UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1... 82 2e-14 UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonel... 82 2e-14 UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=B... 82 2e-14 UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp... 82 2e-14 UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax... 82 3e-14 UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=K... 82 3e-14 UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=C... 82 3e-14 UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecali... 81 3e-14 UniRef50_C5EFX0 N-acetylmannosamine kinase n=1 Tax=Clostridiales... 81 4e-14 UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=... 81 4e-14 UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=S... 81 4e-14 UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=S... 81 5e-14 UniRef50_A5IPI4 Transcriptional regulator, RpiR family n=54 Tax=... 81 5e-14 UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=E... 81 5e-14 UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=P... 81 5e-14 UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 T... 80 6e-14 UniRef50_Q9K8R3 BH2940 protein n=4 Tax=Bacillus RepID=Q9K8R3_BACHD 80 6e-14 UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n... 80 6e-14 UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostri... 79 1e-13 UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax... 79 1e-13 UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Ga... 79 2e-13 UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macroco... 79 2e-13 UniRef50_C3WCJ9 Predicted protein n=1 Tax=Fusobacterium mortifer... 79 2e-13 UniRef50_UPI000196B4B9 hypothetical protein CATMIT_00397 n=1 Tax... 79 2e-13 UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment)... 79 2e-13 UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostri... 79 2e-13 UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdema... 79 2e-13 UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Ta... 79 2e-13 UniRef50_Q38V38 Putative transcriptional regulator with a sugari... 79 2e-13 UniRef50_D1P280 Transcriptional regulator n=5 Tax=Enterobacteria... 79 3e-13 UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=F... 78 3e-13 UniRef50_C9S176 Transcriptional regulator, RpiR family n=2 Tax=G... 78 3e-13 UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU 78 4e-13 UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=P... 77 4e-13 UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus pl... 77 5e-13 UniRef50_Q6M5C3 Transcriptional regulator, rpiR family n=3 Tax=C... 77 5e-13 UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pe... 77 5e-13 UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escheri... 77 6e-13 UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU 77 6e-13 UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostri... 77 7e-13 UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Ba... 77 7e-13 UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional... 77 7e-13 UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae... 77 7e-13 UniRef50_Q2J952 Transcriptional regulator, RpiR family n=3 Tax=F... 77 8e-13 UniRef50_A4NYS2 N-acetylneuraminate lyase n=2 Tax=Haemophilus in... 77 9e-13 UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=C... 77 9e-13 UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteoba... 76 1e-12 UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium ... 75 2e-12 UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia... 75 2e-12 UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Se... 75 3e-12 UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=T... 75 3e-12 UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Li... 75 3e-12 UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=P... 75 3e-12 UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejue... 75 3e-12 UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus ... 74 4e-12 UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=La... 74 4e-12 UniRef50_UPI0001BC58DB RpiR family transcriptional regulator n=1... 74 4e-12 UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family ... 74 5e-12 UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus pl... 74 6e-12 UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID... 74 7e-12 UniRef50_B5RKH7 Transcriptional regulator, RpiR family n=2 Tax=P... 74 8e-12 UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, ... 74 8e-12 UniRef50_B0NJ36 Putative uncharacterized protein n=1 Tax=Clostri... 73 1e-11 UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillale... 73 1e-11 UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostri... 73 1e-11 UniRef50_UPI0000D541FA probable transcriptional regulator n=1 Ta... 73 1e-11 UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=A... 72 2e-11 UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collins... 72 2e-11 UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=F... 72 2e-11 UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C... 72 2e-11 >UniRef50_P37767 Uncharacterized HTH-type transcriptional regulator yfhH n=149 Tax=Enterobacteriaceae RepID=YFHH_ECOLI Length = 282 Score = 575 bits (1482), Expect = e-163, Method: Compositional matrix adjust. Identities = 282/282 (100%), Positives = 282/282 (100%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY Sbjct: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE Sbjct: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD Sbjct: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA Sbjct: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV Sbjct: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 >UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n=48 Tax=Gammaproteobacteria RepID=B5FDJ7_VIBFM Length = 283 Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 105/263 (39%), Positives = 160/263 (60%), Gaps = 2/263 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + L+ + K+ D++L P + SSQ LA + GVSQSS+VK Q+LG+ Sbjct: 1 MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSSIVKLTQRLGF 60 Query: 61 KGFPALKLALSEALASQPE--SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 KGF A KLA+ E L + P PIHN+I DD + +KL++E T A+ AT N + Sbjct: 61 KGFTAFKLAIIEDLGRKQAILEPERPIHNKINSDDSSLTIAQKLVQEKTHALIATTNAIN 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + T+L A+RI + GIG S L A++ A+KL+KIG A +D H +AT + Sbjct: 121 FSEFELVTTLLNQAQRIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATANTLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + ISY+G R+E+ +AA + G V+A+T + L++ A+ C+ TIA+E+ Sbjct: 181 KQDVQIVISYSGSRKEILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 S+SIS+ AQ ++TDLLF+ L+Q Sbjct: 241 SSSISSRTAQNVITDLLFMTLLQ 263 >UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CKN4_PASMU Length = 286 Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/283 (39%), Positives = 169/283 (59%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++++ Y L+ +++++AD++L P + SS+ LAN+ VSQS+++KF+QKLG Sbjct: 1 MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA 60 Query: 61 KGFPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F KLA+SEAL Q P V +H+ I D L + EKL E A+ +L++N+ Sbjct: 61 DKFSDFKLAISEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNA 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + V L A+RI L GIG S LVA++F +KL KIG D HA LA Q+ + Sbjct: 121 IPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+L IS++G RE+ LAA+ K++A+T T N L + A + LY++A+E Sbjct: 181 PQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SI++ AQ +TDLLF+ ++QQ E A + I S AL+ +L Sbjct: 241 SSSIASRTAQHAITDLLFMGILQQK-EHANDLILESRALIGQL 282 >UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5B7U9_EDWI9 Length = 225 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 1/190 (0%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 + G + ++KLAD++L P+ LSSQ+LAN G+SQSSVVKFA+KLG++GFPALK + Sbjct: 29 FAGTKRDERKLADFILSSPEQLGKLSSQELANTLGISQSSVVKFAKKLGFRGFPALKQDI 88 Query: 71 S-EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 S L Q + +H+ I DPL++VGEKL+ E AA+ +TL +N EE+L + ML Sbjct: 89 SAHLLRHQAPANEAALHHGILRHDPLKVVGEKLMAEKIAALQSTLTINHEEQLQRALRML 148 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 ARRI++TG+GASGLVA++FA KLM+IG A A D H +A QA P DLL+AISY+ Sbjct: 149 LGARRIVITGLGASGLVARDFANKLMQIGLAAYAESDTHMQIACAQAMQPQDLLMAISYS 208 Query: 190 GVRRELNLAA 199 G R+E+N+AA Sbjct: 209 GERKEVNIAA 218 >UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enterobacteriaceae RepID=A1JQZ2_YERE8 Length = 286 Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 101/271 (37%), Positives = 164/271 (60%), Gaps = 3/271 (1%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 LA++ KK+A +L P++ +SS Q A +AGVSQS++VKF+QK+G KGFPALK+A+SE Sbjct: 14 LAENQKKIAKCILDNPESILSISSSQFAEDAGVSQSAIVKFSQKIGMKGFPALKIAISEE 73 Query: 74 LASQPESPSVP---IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L+ S P +HN I +D L ++ +KL E TA++ T + + V+++ Sbjct: 74 LSRNNLFKSYPHKALHNSISPEDSLMVMAQKLAHEKTASIMETTRKINFSVFQQVVSLIN 133 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 +A+R+ + GI +GL A++ ++KL KIG D+H +A +P D+ + +S+TG Sbjct: 134 AAQRVQIVGIWGAGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTLTPKDVQIVLSFTG 193 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 R+++ +AA G V+AITG + L + A + L +I++E S+SIS+ AQ Sbjct: 194 RRKDMKIAATVAKAQGATVIAITGSKVSPLAKIADYVLESISDENEWRSSSISSRTAQNT 253 Query: 251 LTDLLFIALIQQDLELAPERIRHSEALVKKL 281 LTDL+F+AL+QQ E+A I ++ + L Sbjct: 254 LTDLIFLALMQQRKEMAKPLILNASMTINNL 284 >UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n=3 Tax=Vibrionales RepID=A5L3V2_9GAMM Length = 282 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 109/279 (39%), Positives = 165/279 (59%), Gaps = 3/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M G+ +++ L+ SD +A Y+L P + LSS +LA GVSQS++VKF+QK+GY Sbjct: 1 MKGIAKVKALLPKLSPSDSLVARYVLDHPQQVKQLSSPELAKAVGVSQSTIVKFSQKIGY 60 Query: 61 KGFPALKLALSEA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF +K+ L ++ ++ QP S IH I D V EKL+ T ++ T+ +N Sbjct: 61 KGFSEMKVKLYQSDMSYQPVSQR-GIHGTITRKDSPDTVMEKLLASKTQSLERTVLLNEG 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E+L +L A +I ++G+GAS LVA++FA+KLMKIG A D H +A + + Sbjct: 120 EQLSNAADLLHLANKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPDAHIQIANAASLTE 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+L+AISY+G RE+ A KV+ I+ +P+AL + A L + A+E S Sbjct: 180 NDVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKLISAADENHIRS 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +SI+A +Q +TDLLFIAL QQ+ E A + I S++ V Sbjct: 240 SSITARDSQFYITDLLFIALTQQE-EQADQLIEQSKSAV 277 >UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C448 Length = 286 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 102/271 (37%), Positives = 160/271 (59%), Gaps = 3/271 (1%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 LA++ +K+A ++L P+ +LSSQQLA VSQS++VKF+QK+G KG+PALKLALSE Sbjct: 14 LAENQRKIAQFILENPENVLNLSSQQLAEILDVSQSAIVKFSQKVGVKGYPALKLALSEI 73 Query: 74 LASQ---PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + Q +P +HN+I DD L +V +KL E ++ T + ++ V + Sbjct: 74 IGRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLIDFKQFERIVERID 133 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 ++R+ + GIG SGL A++ ++KL KIG D H +A + D+ + IS+TG Sbjct: 134 QSQRVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTLNTHDVQIVISFTG 193 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 R+++ AA+ + G V+AIT + L Q A + L +IAEE S+SIS+ AQ Sbjct: 194 RRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEWRSSSISSRTAQNT 253 Query: 251 LTDLLFIALIQQDLELAPERIRHSEALVKKL 281 LTDL+F+AL+Q+ A + ++ ++ KL Sbjct: 254 LTDLIFMALLQRREAKAKSLVMNARVVINKL 284 >UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15N75_PSEA6 Length = 282 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/261 (40%), Positives = 156/261 (59%), Gaps = 2/261 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I+ L+ S+ KLA ++L + R LSSQ+LAN GVSQSSVVKFAQKLGY Sbjct: 1 MSTFTKIKAIKDTLSNSELKLAKFVLSSSNAVRDLSSQELANVVGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+PA KL + +AL S + +H +I +D + V EKL+ A + T N+N E Sbjct: 61 KGYPAFKLGVIDALNSTASEGN--LHGKITLNDSFKQVSEKLLSSKVAVLTETKNLNEEA 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 H+ V +L+SA+RI++ G+G S LV ++F++KL K+G A DMHA LA S + Sbjct: 119 AFHQAVELLKSAKRILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATLSEN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+ AIS +G RE+ + + KV+ +T + + A LY++AEE++ + Sbjct: 179 DLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESARLS 238 Query: 241 SISACHAQGMLTDLLFIALIQ 261 SI A AQ + D+LFIA+ Q Sbjct: 239 SIMARTAQEFIIDILFIAITQ 259 >UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=Gammaproteobacteria RepID=A0KFB6_AERHH Length = 286 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/252 (38%), Positives = 148/252 (58%), Gaps = 3/252 (1%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L+ S+ K+ADY+L P+ H SSQ+LA +A VSQSS+VKF QK+G+KGF A KLA+SE Sbjct: 14 LSPSELKIADYILACPEQVTHFSSQELAQQADVSQSSIVKFTQKIGFKGFTAFKLAVSED 73 Query: 74 LASQP--ESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L + ++ +V ++N I DD L + +KL +E ++ T L + ++ Sbjct: 74 LGRKHAIKTDNVGDLYNGIGRDDDLETMAKKLAQEKINSIVETTQALDNATLARVLDVIN 133 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A R+ L GIG S L A++ +KL+KIG +D H ++ Q P D+ L +SY+G Sbjct: 134 QAGRVQLVGIGGSALTAKDLWYKLLKIGVTTLFAQDSHVQISIAQTLGPGDVQLVVSYSG 193 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 R++ AA+ R G ++A+T F L+Q A L T+A+E +SIS+ AQ Sbjct: 194 ASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENELRISSISSRTAQNT 253 Query: 251 LTDLLFIALIQQ 262 +TD+LF+ L+Q+ Sbjct: 254 ITDILFLGLVQR 265 >UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium RepID=C3WE65_FUSMR Length = 284 Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 89/264 (33%), Positives = 151/264 (57%), Gaps = 1/264 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++I ++ ++KK+ +Y+L PD + L++ +LAN SQ++VV+FA++LG+ Sbjct: 1 MGVLIKINSMLDNISSTEKKVGEYILENPDKIKDLNTYELANITKTSQATVVRFAKRLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPI-HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGFPA KLALS+ L ++ V I H +I+ DD ++G K+ EN A+ T V Sbjct: 61 KGFPAFKLALSQDLGNRKAESHVNIMHEEIKPDDSFEIIGRKISNENITAISDTYEVTDF 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V ML AR+I+L GIG SG+VA++F +KL+++G +A D H L+ + Sbjct: 121 TELEKAVVMLSKARKIMLAGIGFSGIVAKDFYYKLLELGKHAMIEVDTHMQLSCLSTMGE 180 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+L IS++G E+ G V+A+T PN ++ A L T+ S Sbjct: 181 DDVLFVISHSGKTMEMYNVVKVAKSKGITVIAMTSIAPNPIKDLADIRLNTVEMNSNFRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQD 263 ++S +Q + D+L++ ++ ++ Sbjct: 241 TALSPRISQLTVIDMLYVKMMLEN 264 >UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax=Enterobacteriaceae RepID=MURR_SALAR Length = 287 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/266 (34%), Positives = 153/266 (57%), Gaps = 4/266 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L ++R ++++K+A +LL + +SS+ +A + +SQSS+VKFAQKLG GF Sbjct: 4 LAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGANGF 63 Query: 64 PALKLALSEALASQPE---SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 L++AL E + E +V +H+ I +D L ++ KL +E A+ T N+ E Sbjct: 64 TELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLMDYE 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + ++ A I +TG+G S LV ++ ++KLMKIGF A D H QA Sbjct: 124 RLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQALRQG 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A + L T++ E S+ Sbjct: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLADYTLDTVSGETEWRSS 243 Query: 241 SISACHAQGMLTDLLFIALIQ-QDLE 265 S+S AQ +TDLLF+ ++Q D+E Sbjct: 244 SMSTRTAQNSVTDLLFVGMVQLNDVE 269 >UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=Shigella flexneri 2002017 RepID=D2AGN5_SHIF2 Length = 333 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/262 (35%), Positives = 153/262 (58%), Gaps = 3/262 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +IR +++K+AD+L + + +SS+Q+A + G+SQSS+VKFAQKLG +GF Sbjct: 71 LTKIRNAESEFTGNEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 130 Query: 64 PALKLAL-SEALASQPES--PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 L++AL E AS+ ++ ++ +H+ I DD L ++ KL +E A+ T + Sbjct: 131 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYA 190 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + ++ A I +TG+G S LV ++ ++KLMKIG+ A D H QA Sbjct: 191 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 250 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A L T++ E S+ Sbjct: 251 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEWRSS 310 Query: 241 SISACHAQGMLTDLLFIALIQQ 262 S+S AQ +TDLLF+ L+Q Sbjct: 311 SMSTRTAQNSVTDLLFVGLVQH 332 >UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=Alphaproteobacteria RepID=Q28KP3_JANSC Length = 306 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/235 (36%), Positives = 135/235 (57%), Gaps = 1/235 (0%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L+ D+++AD +L PD LSS +LA AG SQSSVVKF QKLG+ G+ L+LA++ A Sbjct: 39 LSAGDRQIADTILGDPDRMARLSSGELARAAGRSQSSVVKFCQKLGFSGYQDLRLAVTRA 98 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 A+Q ++P+ +H+ I D + +KL+ A+ TL++N + L L A Sbjct: 99 AATQ-KAPNDAVHSSIEVSDDASMTAQKLLASKIHALQETLSINPAKNLDAARDALNGAA 157 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 R+ L+G+GAS LVA++F +KL K+G + D H +A +PDD+L+++S +G Sbjct: 158 RVQLSGVGASSLVARDFVYKLQKLGISVLFDADSHIQMAHSATLTPDDVLVSLSQSGFSL 217 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 E A+ + G ++ +TG PN L A L T+ +E S++I++ AQ Sbjct: 218 ETLRIAEAAAKRGATIITVTGLHPNPLADVADKALCTVTDEDQVRSSAITSRDAQ 272 >UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=Stenotrophomonas RepID=B4SHK0_STRM5 Length = 282 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 146/282 (51%), Gaps = 13/282 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LL+IR ++ ++++AD++L R SSQQLA+ G+SQSSVVKF+QKLG+ Sbjct: 1 MPPLLKIRSERGQMSAIERRIADFILDNAHLLRDYSSQQLASALGISQSSVVKFSQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+P LK ++ + +A P GDD LRL GE L + A T N E Sbjct: 61 KGYPDLKYSIGQDVARAGADPQQAPSEPDSGDDYLRL-GEALRRSKAQAEEETRQANPRE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A ++ + G+G GL A+ FA +L +G D +LA + A+ P Sbjct: 120 EIERIVQLLDGAPKLFVYGLGDDGLYAREFAMRLSLLGLLVVPHTDPILMLANLSAARPG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL S G +L+ + + +GGKV++IT T N L+ A L A ++ A Sbjct: 180 DVLLMFSEFGNLPQLSQLSRQFQDMGGKVISITRHTANPLRAHADAALAVCAHDRTPQVA 239 Query: 241 SI---SACHAQGMLTDLLFIALI------QQDLELAPERIRH 273 + SA HA L D LF+ L QQ L + ERI H Sbjct: 240 QLLYRSAMHA---LLDFLFVLLCHANPDRQQQLAVNLERIDH 278 >UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=A0ZNS9_PHOPO Length = 277 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 94/257 (36%), Positives = 138/257 (53%), Gaps = 8/257 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L+ S +K+A +L QP LSS QLA +A V QSS+VKF QKLG+ GFPA K A+ E Sbjct: 14 LSPSAQKIAALILQQPAAVVSLSSLQLAQQANVGQSSIVKFTQKLGFTGFPAFKNAIKEE 73 Query: 74 LASQPESPSVP--IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 LA Q + P + NQI D L + +KL + T A+ T N E+ L + + + Sbjct: 74 LARQQAIGNDPQQLQNQISHSDTLITIAQKLAHQKTDAIIETTNAIDEQNLKNIIALFIN 133 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A+RI L G G S ++A++F+ KL+ +G A A +D + + + P D+ I Y G Sbjct: 134 AQRIQLVGFGHSAIIAKDFSTKLLTLGMMAIAEQDSRSQIDIAKTLGPTDIQCHICYDGN 193 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT------NSASISAC 245 ++ L A G ++A+T L+Q A L T+A E + ++ SI++ Sbjct: 194 HQDALLTAHSAKMKGATLIALTSPHSTPLRQLAQFSLDTLAIETSNHRQYQPHNYSIASH 253 Query: 246 HAQGMLTDLLFIALIQQ 262 AQ LTDLLF+AL Q Sbjct: 254 AAQQTLTDLLFMALTHQ 270 >UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7REF2_ANAPD Length = 279 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 86/283 (30%), Positives = 158/283 (55%), Gaps = 7/283 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++I++R + SD K+A Y+L +P ++SQ+LA+ G SQS++++F QK+GY Sbjct: 1 MTYTIKIKERSEDFTPSDTKIAKYILDKPGEVIKINSQKLADLTGTSQSAIIRFVQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQ-IRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ +LKL ++++L E+ + + ++ I DD + + EK +++ T + E Sbjct: 61 KGYTSLKLDIAKSL----ENDEINLKSEVISADDKVGDIIEKSKINVISSIEKTYALIDE 116 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +++ + + + A + L GIG+SGLV ++F +KL + G A D H L+ + Sbjct: 117 DQISKAIDNIVYANFVYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTNIKE 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATN 238 DDLL+ I+YT + +E+ +AA+ +G K+++IT L S L I E E+ Sbjct: 177 DDLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLAN-MSDILIPIPEIEKKMR 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A ++TD+LF I ++++ + + S+ L KL Sbjct: 236 YGAISSRFASQIITDILFYGYISKNMDEVVKNLMVSKELTDKL 278 >UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes RepID=Q8R7I8_THETN Length = 285 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 141/258 (54%), Gaps = 4/258 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ Y L ++KK+ADY+L ++ +LS +LA + G ++++V+F +++G Sbjct: 8 NVILKIQSIYNSLTNAEKKVADYVLENAESVIYLSITELAEKCGTGETTIVRFCRRIGLS 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A P IH I +DPL ++ +K+ ENT A+ T+ + S + Sbjct: 68 GFQEFKLNLAKEIAE----PETSIHENISFNDPLDVLVQKITTENTLAISNTVKLLSMSE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + +AR+I G+GASG A + +K M++G N A D H + + + D Sbjct: 124 LEKAVDAIINARKIQFYGVGASGYTALDAKYKFMRLGLNVDANLDAHIQAISAVSLTDKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ G +V+AIT + + + A L T A+E S + Sbjct: 184 VAVGISFSGSTKDTVETCRLAKEAGARVIAITNYARSPITSVADIVLLTSAKETPLRSGA 243 Query: 242 ISACHAQGMLTDLLFIAL 259 +++ AQ + D+L+ A+ Sbjct: 244 LTSKIAQLHILDILYTAV 261 >UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI47_9CLOT Length = 285 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 143/246 (58%), Gaps = 8/246 (3%) Query: 16 QSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALA 75 +++ K+ +++ + H+S A GVS++++V++AQKLGYKG+ A+K+++++ + Sbjct: 22 KNEMKIYEFIEINRKEIIHMSVADAAEACGVSEAAIVRYAQKLGYKGYQAMKISIAQDVI 81 Query: 76 SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRI 135 P I+ Q+ D + + +K+ N ++ T +V S E + E V ++ RR+ Sbjct: 82 E----PGQQIYGQLSKGDTIPTIVDKIFDSNIQSLRDTSDVLSRENIDEAVNLILGCRRL 137 Query: 136 ILTGIGASGLVAQNFAWKLMKIGFNAAAVRD--MHALLATVQASSPDDLLLAISYTGVRR 193 + G+G SG VA + K +KIG+ A A D + A+ A+V S D+L+A+S++G + Sbjct: 138 LFFGVGGSGCVAMDGQHKFLKIGYMAMAFTDSNLQAMAASVLTSR--DVLVAVSHSGASK 195 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 ++ +A D + G K +AIT + + + ++A LYT + E A NS ++S+ A+ + D Sbjct: 196 DILMAMDIAKQSGAKTIAITNYGKSPIVEKADVVLYTSSNETAFNSDALSSRIAELTIID 255 Query: 254 LLFIAL 259 +L+I + Sbjct: 256 MLYIGV 261 >UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=Bacillales RepID=C4L752_EXISA Length = 282 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 83/267 (31%), Positives = 143/267 (53%), Gaps = 4/267 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNG RIR Y L++ ++++ADY+L QP+ H + Q+A++ V++S+V +F Q++G+ Sbjct: 4 MNGTARIRGAYSTLSKKEQRIADYILKQPEQIIHHTINQVADDLDVAESTVFRFCQRVGF 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ ALK+AL AS +P IH I D + EK+ N + +T + Sbjct: 64 KGYQALKIAL----ASDVVAPLQDIHEDITETDTALEIAEKIFSTNGKTIESTRQILEGV 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + ARRI G G S +VA + K ++ G +A+ + H L + + Sbjct: 120 SLEKAVELFLGARRIEFFGSGGSAVVALDAYHKFVRSGLQVSAMLESHMQLMSASQLTTA 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G +E A + G ++AIT + + L + A LYT+++E A S Sbjct: 180 DVAVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETAFRSE 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELA 267 ++++ A+ L D LF A++ + E A Sbjct: 240 ALASRIAELSLIDALFTAVMMRRGEAA 266 >UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GD47_CLOBL Length = 281 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 84/281 (29%), Positives = 147/281 (52%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LLRIR+ + + +S+KK+A+Y+ P S+Q++A + S +S+++F +K+GY Sbjct: 1 MGVLLRIRENFDSMTKSEKKIAEYIFKSPKDIISDSAQEIAIKTSTSPASIIRFTKKVGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K AL +A + S I +D + + KL + + T + +E Sbjct: 61 NSLNEFKFAL---VAEEYTKESTEFDYIINYNDSIDSIINKLGNKVIDTINDTKELVDDE 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL E V +++A I L G+GAS +VA +F +KL++I +D H LA + Sbjct: 118 KLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNR 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G RE+NLA +E + G +AIT + L A L + E+ Sbjct: 178 DVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ L Sbjct: 238 AISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVL 278 >UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ1_HIRBI Length = 297 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/274 (31%), Positives = 141/274 (51%), Gaps = 6/274 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + RIR R L S +ADY+L + +S +LA G S+ SV+ ++LG Sbjct: 20 NVISRIRIRKDSLGPSTSTIADYVLGHANAVVGMSVTELAEATGTSEGSVINLCRQLGLS 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH ++ D V +K+ + A+ TL++ + Sbjct: 80 GFQQLKLSLAQEVVR----PVQFIHEDLQPSDDTSTVCQKMFHAGSEALRETLSILDPDA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++RSA R+ + GIG+S +A++ +++++IG +A V D H + + P+ Sbjct: 136 ISMAVDVIRSADRVEIYGIGSSAPIAEDAQYRMLRIGLDAKVVVDSHIQAISASRTGPNV 195 Query: 182 LLLAISYTGVRRELNLAADEMLR-VGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L IS++G E LAA + R G K + IT F + LQ A LYT+A E S Sbjct: 196 AVLTISHSGSTHE-TLAATRLARDAGAKTIIITNFASSPLQAYADVKLYTMARETKFRSE 254 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 ++++ AQ + D+L AL D E A +R + Sbjct: 255 AMTSRIAQLCILDVLIAALALDDYERATTVLRQT 288 >UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789683 Length = 289 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/277 (29%), Positives = 144/277 (51%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I Y L +++KK+ADY+ P+ + L+ +AGV ++SV++F +KLG++ Sbjct: 12 NTLLMISSIYSSLTKTEKKVADYVKGFPEETVLATVTDLSEKAGVGETSVIRFCRKLGFR 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL++++ L +P PSV + I D L V KL ++ + TL++ + + Sbjct: 72 GFHEFKLSVAQDLVDRP--PSV-VDTSIDEQDDLMTVARKLTMQHEILLKNTLDLVNADN 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ + G+G+SG+ A + ++LM++G N A RD H + + D Sbjct: 129 LRMAVDKLLAANKVYVYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVKKGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ AIS +G R+L A E + G V+ +TG + + A L + E T + Sbjct: 189 LVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ Q + ++L L+ E A E ++ + + V Sbjct: 249 LATKFMQTYMLNIL-TTLLTMKKEDASESLKKTASSV 284 >UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R285_BRAHW Length = 285 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 8/284 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L IR +Y+ +++ KK+++Y+L P L++ ++ GVS +SVV+FA+ LG+ Sbjct: 1 MNAYLIIRDKYEDFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEK---LIKENTAAMYATLNVN 117 KG LK+++ A + + I+ I DD + + K LIK + + L+ Sbjct: 61 KGLDELKISI--ASKNGDDDNKYNINTIISADDNVEELCNKIMLLIKSSNEDFFYQLD-- 116 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +E L + ++R+AR I + GIGAS L A + KL + FNA D H Sbjct: 117 -KEALEKAFKLIRNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYL 175 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +D+++A SY+G E+ ++A+T N L + A + E+ T Sbjct: 176 TEEDVVIAFSYSGRTNEVIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELT 235 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ +++DLL+ IQ+D E E + ++ L ++L Sbjct: 236 RMGAITSKYSSLIVSDLLYFGAIQKDFENIKENLINTSILTREL 279 >UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA31_9ACTN Length = 281 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 2/261 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+R++Q + ++++L + +L P++ LS +LA A VS S++ + +KLG KG+ Sbjct: 5 LVRLKQYRDNASPAERELIERILDDPESISGLSIHELAAYAFVSPSTITRLCKKLGLKGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 + L LA ES S I + + D R EK+ ++N ++ +N E Sbjct: 65 KEFQHLLIYDLALLRESSSSKIED-LAPTDTSRQTIEKVTRDNIDSLRLVEKLNDPETYE 123 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 CV ++ AR I L G+GAS L A++ +KL++IG + + D H L S P+DL Sbjct: 124 ACVDLMSDARTINLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSGPEDLS 183 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA-LQQRASHCLYTIAEEQATNSASI 242 +AISY+G+ E+N+ GGKV+AITG ++ L ++A L + E SA++ Sbjct: 184 IAISYSGLTEEVNVCVGRARERGGKVIAITGSAFDSKLARQADEVLLVGSTEPLMRSAAM 243 Query: 243 SACHAQGMLTDLLFIALIQQD 263 ++ Q + D+LF + + ++ Sbjct: 244 ASRIGQLGVIDILFKSFVNRN 264 >UniRef50_P26833 Uncharacterized HTH-type transcriptional regulator CPE0189 n=15 Tax=Clostridiales RepID=Y189_CLOPE Length = 279 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 142/265 (53%), Gaps = 3/265 (1%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 +S+K L +Y+ D + S +A E+GV ++++ +F +KLG+ GF K+ L++ + Sbjct: 15 TKSEKTLIEYIKSDLDNIIYKSISIIAKESGVGEATITRFTKKLGFNGFQDFKVTLAKEI 74 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 +++ + + +H + D+ + K++K + + T+ + + +C ++ +A+R Sbjct: 75 SNKKNTSIINLH--VHRDESVTETANKMLKSSINILEQTVKQIDLDLMCKCRDLIMNAKR 132 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + GIG SG+ A + +K M+IGF V D H ++ ++ DD+++AIS +G +E Sbjct: 133 VYFIGIGYSGIAATDINYKFMRIGFTTVPVTDSHTMVIMSSITNDDDVIVAISNSGTTKE 192 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDL 254 + + G K++ +T + N L++ + + L + E + SIS+ Q L DL Sbjct: 193 VIKTVKQAKENGTKIITLTEDSDNPLRKLSDYELTYTSAETIFETGSISSKIPQIFLLDL 252 Query: 255 LFIALIQQDLELAPE-RIRHSEALV 278 L+ +I++ A E +I+ + A++ Sbjct: 253 LYTEVIKEMFSEAVEKKIKTTSAIL 277 >UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7S3_BREBN Length = 288 Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 143/258 (55%), Gaps = 3/258 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 GL+ ++ L S++K+ADY+L P+ LS Q+LA +GVS++++++ A+ L KG Sbjct: 8 GLVGLQAILDQLKPSERKVADYILAHPEDVVKLSVQKLAEYSGVSEATIIRLARSLNMKG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKL ++ L Q S + +I + + + + + N ++ TL+V S E++ Sbjct: 68 YQELKLRVAGDLTKQTARGS---YQEIMMEGSVESIMQAVSWNNIQSIQDTLSVLSNEEV 124 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +L AR+I + G+GAS ++A + K +I A D HA L + + D+ Sbjct: 125 KKAVDVLSVARKIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKDV 184 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ ISY+G ++ + E + G ++ +T F P+ + + A+ L+T + E++ S ++ Sbjct: 185 VIGISYSGQTEDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGAM 244 Query: 243 SACHAQGMLTDLLFIALI 260 ++ AQ + D+LFI +I Sbjct: 245 ASRIAQLNVIDILFITMI 262 >UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788119 Length = 278 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 78/282 (27%), Positives = 144/282 (51%), Gaps = 5/282 (1%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MNG L+R+R+ Y L S++K+A ++L +P +S LA +G SQ+++V+ + +G Sbjct: 1 MNGGLVRLREVYDSLNPSERKVAAFILQEPAEMIQMSVADLAVRSGSSQAAIVRLCKTMG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +KG+ LKL ++ L + P + IR +D + + + + N ++ T+ + E Sbjct: 61 FKGYQDLKLKVAGDL----QEPLATGYQDIRPNDSISAIIQNVSNNNIQSIRDTMKIMEE 116 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E V L ++RI + G+GAS L+ + K ++I + D H L + +P Sbjct: 117 GMVEEAVLALDQSKRIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTP 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD + ISY+G E+ AA G K + IT + + L + LYT + E S Sbjct: 177 DDAAVCISYSGETDEVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRS 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ Q L D+L++ + ++ E + + + S +K+L Sbjct: 237 GAMSSRITQLNLIDILYLGVASRNYENSVKYLDESRRAIKRL 278 >UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77F Length = 277 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 151/282 (53%), Gaps = 8/282 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ L +++K++A Y++ P+ S+ +L + S ++VV+FA+KLGY Sbjct: 1 MSCITRIKE--ASLTETEKEIAQYIIEHPEQVLDDSAMKLGEKTHSSSAAVVRFAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVP-IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GFP LK+ L++ L S+P + N + D+ + + K+ + T ++ S Sbjct: 59 SGFPQLKIELAKDLVG-----SIPEVDNLLHPDEDMATLMNKVHHSQIVTIDKTYHLLSA 113 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + V L A+ + L G+G S +V +F KLM+IG A D+H + +V + Sbjct: 114 STLEDVVKALEQAKHVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNMTE 173 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL + +SY+G + + AA + +AIT N L + H L ++EQ+ Sbjct: 174 EDLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSLRI 233 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ ++ ++ DLL+ L++++ E ++I ++ +++++ Sbjct: 234 GAMSSRYSSLIVVDLLYYGLVKRNKEKYAQKIINTRRIIQEM 275 >UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZR0_ERYRH Length = 280 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 141/281 (50%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ ++K++A+Y+L D + SSQ A E S +++V+F++K+GY Sbjct: 1 MSCIYRIKENMHTYTDTEKRIAEYILENKDEVVNFSSQHFAKEINSSAAAIVRFSKKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + + +S I+ +D + + K N T + + E Sbjct: 61 NGFTHLKVELARDHSEEEQS----FDKLIKEEDTIETMVRKSHYSNHRTFDNTYKLLNLE 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +ARRI L GIG SG+V Q+ K ++I + D H ++++ + + Sbjct: 117 VLDASIAAISNARRIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHITEN 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+SY+G RE+ +A G +AIT N L + + + EE Sbjct: 177 DVTIALSYSGQTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEVRLG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI++ + ++DLL++ + + ++E +I ++ +K + Sbjct: 237 SIASRFSMLAISDLLYLGVAKNNIEETRRKIVNTRDTIKSI 277 >UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AZQ1_ENTCA Length = 283 Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 6/279 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 L+I+ Y+ L+ ++ +ADY+L P H S L+NE G++ S+ +F +KLGY GF Sbjct: 7 LQIKTLYKDLSLKEQAIADYILENPSKVSHSSISDLSNELGIADSTFFQFTKKLGYNGFK 66 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 K+A+ L + + ++ IH I+ D + +K+ N + T N+ EE L Sbjct: 67 DFKMAM---LMQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLKEEDLKL 123 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 M+ ++R+ G+G S +VA + K ++ D H L +PDD + Sbjct: 124 AAAMINQSKRLFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLTPDDCGI 183 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS+TG RE A G K++ IT + L + +I+EE S ++++ Sbjct: 184 FISHTGKSRETIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFRSEALAS 243 Query: 245 CHAQGMLTDLLFIALIQQDLELAPE---RIRHSEALVKK 280 AQ + D L++ L+ + + A + +IR S + +K+ Sbjct: 244 RIAQLSIMDSLYVILMFINRDKAQQSIAKIRRSISKIKE 282 >UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=Dictyoglomus RepID=B8E0M8_DICTD Length = 281 Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 5/278 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +I+++ + S++K+A+Y+L + HL +LA GVS++++V+ +KLG +GF Sbjct: 6 LEKIKEQKESFRDSEEKVANYILARWQEVLHLPITELAERIGVSEATIVRMCKKLGLRGF 65 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+AL A++ P +H ++ D L + +K+ N AM +TLNV S +++ Sbjct: 66 QELKIAL----ATEKIQPIKTVHQAVQEGDDLETILKKVFSANIRAMESTLNVISVKEIE 121 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + +AR++ + G+G SG VA + K MK G A D H + + P D++ Sbjct: 122 RAIDAILNARQLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILEPQDVV 181 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS +G +++ A + G + IT + L + L +EE + S S Sbjct: 182 IGISASGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYRTESTS 241 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHS-EALVKK 280 A AQ + D L+I + + L+ E ++ + EA+V K Sbjct: 242 ARIAQLSIIDTLYIGVALKRLDKMIENLKLTREAIVPK 279 >UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM2_KOSOT Length = 283 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 4/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I +++KK+A +++ P ++S ++++ VS+ S+V+F QKLGY Sbjct: 6 NVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+AL A++ ES S + D L + + + + + T SEE Sbjct: 66 GFHPFKIAL--AVSENQESFSSSEFDFNSRD--LSSLKNYVAQRHIDVIKNTSEFISEEI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV + +AR I+++G+GASG A + +K M+IG N D H D Sbjct: 122 LEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAIS +G E+ AD + G V+AITG+ + L + A H L T E S + Sbjct: 182 VLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + AQ + +LLF A+ + E + I + V K + Sbjct: 242 LRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWI 282 >UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F6M8_SACEN Length = 308 Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 1/262 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+RIR GLA++++++A+ +L P + S ++A AG S+++V +F + +G G+ Sbjct: 16 LIRIRSLLPGLARAEQRVANIVLADPASVARRSITEVAEAAGTSETTVTRFCKAIGVGGY 75 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 P L++AL+ A ++ S + + I +D +R + EK+ + A+ T + E L Sbjct: 76 PDLRIALA-ADTARTSSRDRDLGSDIGPEDDVRKIIEKVSYADAKAVEETADQLDAETLR 134 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V + ARRI + G+GAS VA + KL +IG A D H L + D+ Sbjct: 135 SLVDAVARARRIDVYGVGASAFVALDLQQKLHRIGLTCFAWSDTHNALTSAAVLREGDVA 194 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS+TG E A E + G A+T F + + + A H L T E S +++ Sbjct: 195 IGISHTGATTETVEALQEAGKRGATTAALTNFARSPITEVADHVLTTAVRETTYRSGAMA 254 Query: 244 ACHAQGMLTDLLFIALIQQDLE 265 + Q + D LFI + Q+ L+ Sbjct: 255 SRIGQLTVIDCLFIGVAQRHLD 276 >UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITC5_RHOCS Length = 280 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 84/256 (32%), Positives = 132/256 (51%), Gaps = 7/256 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RIR GL +S++K+AD +L QP + S +LA++A VSQ +VV+F + +G G+ Sbjct: 2 LDRIRSMRPGLRRSEQKIADIVLRQPHAVVNASVAELAHDADVSQPTVVRFCRSIGCSGY 61 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 KL L++ LA+ P P + +R DDP+ + KL+ + A+ N + + L Sbjct: 62 QDFKLRLAQDLAAGPARP----EDAVRPDDPVAEIAAKLLNRSIGALTRLRNQLNPDALE 117 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V +L RR+ G GASG+VA + K ++G A D H P + Sbjct: 118 AAVQVLTETRRLDCYGFGASGVVALDAQNKFFRLGLPVVAHTDSHVQAMAAALLGPQGVA 177 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATNSASI 242 LA+S +G REL + D L G +V+AIT G +P L RA+ L A E ++ + Sbjct: 178 LAVSRSGRTRELLRSVDLALAGGARVIAITAGGSP--LAGRATVPLLVDAPEDSSPYTPM 235 Query: 243 SACHAQGMLTDLLFIA 258 ++ A + D+L +A Sbjct: 236 TSRIAHLAVVDILQVA 251 >UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUK3_9FIRM Length = 280 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 10/285 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +I+ + + +++ + Y+L +++ +L +G S ++ +FA+K+GY Sbjct: 1 MSCITKIKSALESMTATEQMIGRYILEHRHEVLEMNTLELGWASGTSGAAWTRFAKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTA---AMYATLNVN 117 KG PALKL L++ + E P V + DP +G L K T + T + Sbjct: 61 KGLPALKLDLAQDRTDE-EMPEVDLFL-----DPRDTLGALLHKTQTILEQNLRRTYELI 114 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E L + + M+ SA R+ L GIG SG+V + KL +I RD H L+A + Sbjct: 115 DEAVLAQAIDMMASAHRLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHC 174 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA-LQQRASHCLYTIAEEQA 236 P D++L +SY+G +N A G K++AITG A L A CL+ +E+ Sbjct: 175 MPGDVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKE 234 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+++ ++TDLL+ + Q+ E + + +++K+ Sbjct: 235 IRLGSVTSRDGSLIVTDLLYYGVAQRQFHATKEHLVKTRKMIRKI 279 >UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N1V0_9FIRM Length = 277 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I++ ++K +A Y+L S+Q L + G S +++++F++KLGY Sbjct: 1 MNSYAKIKEAQSSYTSTEKVIAKYILENAADVLKCSAQSLGEKTGTSAAAIIRFSKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK++L+++ +P I I +D + + +K + N + T + Sbjct: 61 NGFSELKMSLAQS----KRAPEEKIDFIIDENDDIVTLADKCCRLNMNTVLKTYQLIDTN 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L +A I L G+G S +VAQ+ KL +IG +D+H L ++ + + Sbjct: 117 QLDNAIKKLIAANTIYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESMNKE 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G + L A + +++IT F PN L + + L EE+ Sbjct: 177 DAALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEIRMG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ + ++TDLL+ + + DL +++ ++ +V K+ Sbjct: 237 AISSRISSLVMTDLLYYGVFKNDLTGNKDKLIETKRIVSKI 277 >UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JIB3_RHOER Length = 291 Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 9/257 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RIR L+ ++ ++A+ + P A L+ LA A S ++VV+ A++LG++G+ Sbjct: 14 LARIRASLSSLSPAELRIAEIIEADPSLASTLTVNDLAERASTSTATVVRTAKRLGFEGY 73 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 P L+LAL+ S E+ ++P+ I D V KL + + + T + L Sbjct: 74 PQLRLALAAISGSGTEN-TIPLGVDIVAADSAGEVMAKLAEFESEQLKGTAQLTDPAALE 132 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V+ +RSARR+ + GIGASG+VAQ+ KL +I N D A + + PDD+ Sbjct: 133 EVVSRIRSARRVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLDRDAAMVSASLLGPDDIA 192 Query: 184 LAISYTG----VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + IS++G V L LA R G AITG + L ++ H L T E S Sbjct: 193 VGISHSGETSDVVEPLALA----RRTGASTAAITGGARSTLAVQSHHVLLTAGREFGFRS 248 Query: 240 ASISACHAQGMLTDLLF 256 A++++ Q ++ D +F Sbjct: 249 AAMASRTGQLLVVDTIF 265 >UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales RepID=C0ZD50_BREBN Length = 288 Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 134/257 (52%), Gaps = 5/257 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L ++R Y L+ ++++ADY+L H S +LA++ + ++V + ++LG++G+ Sbjct: 12 LTQLRAIYTQLSGKEQQIADYILEHASEIIHFSITELADQCQCADATVFRLCRRLGFRGY 71 Query: 64 PALKLALSEALASQPESPSVPIHNQIR-GDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 A K+AL AS+ +P IH +I DD + + EK+ N + T + ++++L Sbjct: 72 QAFKIAL----ASEVTNPKQTIHQEINLDDDDVSAIAEKIFTANIETIRDTQQIINKDEL 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V+ L +A RI G G S ++AQ+ K M+ G D H + + + + Sbjct: 128 MKIVSCLENASRIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLTKGAV 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS++G +++ A G K + IT + + L + A CLYT + E + ++ Sbjct: 188 VVGISHSGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFRTEAL 247 Query: 243 SACHAQGMLTDLLFIAL 259 S+ AQ L DLL++A+ Sbjct: 248 SSRLAQLSLIDLLYVAV 264 >UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PDB4_BACCO Length = 283 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 134/257 (52%), Gaps = 4/257 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI+ Y + ++K+ADY+L P H + Q+A++ V+ ++V +F +++G+ GF Sbjct: 11 LHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSGF 70 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ALK+AL A++ P + ++ D + V K+ + N + T++ +++ LH Sbjct: 71 QALKIAL----AAEAARPGKNMDEAVKDTDNEKAVAIKVFESNIETLQDTIHTLNQKHLH 126 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V + A+ I+ G G++ ++A + K ++ A D H L + + +D+ Sbjct: 127 EAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKEDVA 186 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS+ G +E+ + + G K +AIT F + L Q+A L+T+++E +S S Sbjct: 187 VFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFSSFS 246 Query: 244 ACHAQGMLTDLLFIALI 260 A Q L D L++ ++ Sbjct: 247 ARIVQLSLIDTLYVNVM 263 >UniRef50_P44540 Uncharacterized HTH-type transcriptional regulator HI0143 n=33 Tax=Gammaproteobacteria RepID=Y143_HAEIN Length = 288 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/268 (28%), Positives = 134/268 (50%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V +L+ ARRI L G+G+SG+ A++ KLM+IGF A + H + + D Sbjct: 126 LEEVVKVLKKARRIFLFGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S++G E + G +A+T + + + A + L ++ S Sbjct: 186 VAIGLSHSGYSAETAHTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPE 269 I AQ + DL++ L+Q + ++A + Sbjct: 246 IGTKIAQLFVLDLIYALLVQGEEDIAAQ 273 >UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A8S9N1_9FIRM Length = 321 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/272 (27%), Positives = 146/272 (53%), Gaps = 5/272 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+R+ L+ +++++A ++L PD L+ + LA + S SSVV+ + +G++ Sbjct: 36 NVLLRLREVQPSLSSTERQIAQFILENPDETTTLTIRDLARRSFSSPSSVVRICRVIGFQ 95 Query: 62 GFPALKLALSEALASQPESPSVPIHNQ--IRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ L+ AL+ LA+ E+ S H + I D L+ + +K+ +N ++ T + Sbjct: 96 GYKELRHALTLELATLGENGS---HREKDITPQDSLQEIVDKVTHKNIQSLLDTQRLLLL 152 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L +CV ++ +AR ++L GIG+S VA++ K +++ D H+ L + ++ Sbjct: 153 DELEQCVELIANARTVLLFGIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNATA 212 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + SY+G E+ EM G V+A+T + P+ + Q A H LY A E + Sbjct: 213 QDVGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFRN 272 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERI 271 ++S+ +Q + D+L+ A ++ E R+ Sbjct: 273 GAMSSRLSQLNVVDILYTAYASRNHEDTMRRL 304 >UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSQ6_9FIRM Length = 287 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 141/277 (50%), Gaps = 7/277 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RIR Y+ L ++++K+ADY+L HLS +LA +G +++++ + QK+GY+G+ Sbjct: 12 LPRIRSIYKALTKAEQKVADYILENAAKVVHLSITELAEVSGSAEATIFRLCQKVGYRGY 71 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 K+AL+ L +P+ ++ + D + ++ K+ + + TL + E L Sbjct: 72 QHFKIALAGDL----YTPAELVYKDVNAGDSMGVIARKVFHDINEGLQDTLKIIDEAALD 127 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + V + ARRI G S ++A + ++ M+ G A D H + + P DL Sbjct: 128 KAVAAITKARRIDAYGSAGSAVIAADIEYRFMRFGIPVRAYADPHMQIISAALMQPGDLA 187 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A+S+TG R+L + + G V+AIT + + L + A L A+E S +++ Sbjct: 188 IAVSHTGANRDLLDSVAMAKQNGATVIAITSYMKSPLSKLADITLCGSAKETEYRSEAMA 247 Query: 244 ACHAQGMLTDLLFIALI--QQDLELAP-ERIRHSEAL 277 A + D L++ ++ +QD + E+IR + A+ Sbjct: 248 ARLVHLAIVDALYVGVMLDRQDCIVENMEKIRKAIAI 284 >UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Fusobacterium RepID=UPI0001BC57B3 Length = 538 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 127/220 (57%), Gaps = 3/220 (1%) Query: 49 SSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPI-HNQIRGDDPLRLVGEKLIKENT 107 +++V+F++KLG+KGFP KL+LS+ + ++ V I H +I+ D ++G+K+ ENT Sbjct: 303 TNIVRFSKKLGFKGFPDFKLSLSQDIGNRKAESHVNIMHEEIKPTDTFEIIGKKVATENT 362 Query: 108 AAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM 167 A+ T + ++L + V M+ AR+I+L G+G SG+VA++F +KL+++G D Sbjct: 363 MAVNNTYEITDFKELEKAVKMISEARKIMLAGVGFSGIVAKDFHFKLLELGKQTLFENDT 422 Query: 168 HALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 H L+ + + +D+L IS++G E NLA R K++ +T + +++ Sbjct: 423 HMQLSYLATMNENDVLFVISHSGKTLEVFNLAKAAKNR-KVKIITLTSVVQSPIRELGDI 481 Query: 227 CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 L T+ + + ++S +Q + D+++I L+ ++ +L Sbjct: 482 KLSTVEMKSDFRATALSPRISQLTVIDMIYIKLMLENEDL 521 >UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J1X3_9BACL Length = 289 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 15/265 (5%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + + L+ ++KL +Y+L P T H +LAN G+S S+V +F + +KGFP Sbjct: 8 VSSHLETLSPQERKLGEYILESPATVIHQGITELANACGISPSTVTRFCKTFHFKGFPDF 67 Query: 67 KLALSEALASQPESPSVPIHNQ--IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 K+ L+ LA +P H Q I G+D ++V E + + A++ T + +L Sbjct: 68 KMKLASELAHKPAEN----HYQDIIAGNDLQKIV-EAMEANHLASITDTTRLLDMNQLSR 122 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V L A+RI L G+ S +VAQ+F KL++IG N A D H + + + D+ L Sbjct: 123 AVEALCRAKRIDLYGVATSSIVAQDFYQKLVRIGKNCTAFADSHMQITSASSLGEGDVAL 182 Query: 185 AISYTGVRRE----LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 AISY+G E L A D G L++T ++ N+L A L++ + E+ Sbjct: 183 AISYSGETPETIDALRCAKDS----GATTLSLTQYSSNSLASLADIALFSSSLEEGMRRG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 +++ AQ + D+LF ++ + + Sbjct: 239 DMASRIAQLHVIDILFTGMVSLEFQ 263 >UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q040R4_LACGA Length = 283 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 75/276 (27%), Positives = 137/276 (49%), Gaps = 3/276 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 ++ Y + KK+ADYLL P T +Q L S +S+++F Q+LG+KG Sbjct: 6 KVLNNYPNFKGASKKIADYLLAHPKTFLQEDAQGLGKMTKTSAASMIRFCQQLGFKGLKD 65 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 ++ L++ E PI + D+P +V +KL+ T ++ L++ Sbjct: 66 FQIQLAQDTPQDNEETIDPIVDH--HDNP-HIVLQKLLSSIEKNTEQTAHLIDGLALNQA 122 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + L++A RI L G+GAS L AQ+ +K ++ N +D+H L + S D L+ Sbjct: 123 INFLKNADRIYLAGVGASSLPAQDLYYKFIRSDKNVVFNQDIHIALERICYSHSTDALVI 182 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 SY+G+ +E+ L AD+ + ++ +T + L + A L +E+ +I++ Sbjct: 183 FSYSGLTQEILLMADQARKNHTPIIVVTRSRQSPLVELADVVLGVSTDEKLLRVGAINSL 242 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ ++ +LF+A I Q+L ER R +E + +L Sbjct: 243 FSEMFVSSVLFLATINQELPRLEERFRETELITNQL 278 >UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJ20_EXIS2 Length = 284 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 147/277 (53%), Gaps = 15/277 (5%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 ++ L S +K+AD++L + ++ LA E+G S ++VV+F + LG KG+P L++ + Sbjct: 13 HEELPSSSRKVADFVLAHMNEIAGMTIHHLAEESGTSAAAVVRFCRALGLKGYPELRMRI 72 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 S A + H+ + + P LV EK + + A+ T SE+++ E +L Sbjct: 73 S---ADTARTDLKGYHDIEKNERPADLV-EKTVSNSIQALQDTAKQLSEDRIAEAADVLD 128 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDDLLLAISYT 189 AR I GIGAS +VA + A K ++G D H L+AT+ A +S DD+ AISY+ Sbjct: 129 QARAIYFYGIGASNVVALDAAQKWTRVGKLTIQESDQH-LVATILANASQDDVFFAISYS 187 Query: 190 GVRRELNLAADEMLRV----GGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASISA 244 G E+ E++R+ G KV+++T F N + Q A L+T A E SA++S+ Sbjct: 188 GETEEVV----ELIRLAKIRGLKVISLTRFGDNRVSQLADIALWTSRAPEAPLRSAALSS 243 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 AQ D+LF++ + ER++++ VK L Sbjct: 244 RLAQLFAIDVLFLSYAAVHYDDTIERLQYTRESVKML 280 >UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWE9_9CLOT Length = 301 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 9/283 (3%) Query: 2 NGLL--RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 NG L R+ ++ L++ + + A+Y+ + + S LA AG S+++V + KLG Sbjct: 22 NGTLYDRVEEKRGSLSKKELETAEYMAAHQEQLIYSSITDLAERAGSSEATVTRVCGKLG 81 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+GF ALK+ ++ L + P IH + D P ++ EK+ + T + Sbjct: 82 YRGFQALKVGVARELTT----PQEKIHENLEADSPAEVIIEKIFSSAIETLSMTQKSINV 137 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + L ARRII+ G G S +A + K +++ NA A D H + V + + Sbjct: 138 KAVAASIDALCRARRIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMTD 197 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+LLAISY+G R + AA + G V+++T + + + A CL T ++E + Sbjct: 198 QDVLLAISYSGSSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTYSQETRYRT 257 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +IS+ A+ + D ++ + L L + I + EAL + LV Sbjct: 258 YAISSRMAELTIIDTIYTGVA---LRLGDKAIANFEALERALV 297 >UniRef50_Q184N2 Putative phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q184N2_CLOD6 Length = 283 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 118/222 (53%), Gaps = 3/222 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L+++Q Y+ L + DKK+ADY+L + LS +LA+ + S +S+V+F++K+GY Sbjct: 1 MSCILKLKQIYEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ L + + N D + V K+ +N + T +N ++ Sbjct: 61 SGFGDLKIEIAKDLMGKENEYTYVDENY---DCNIDSVINKITNKNIETINQTRLLNEKD 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E V + A+ + + G+G S LVA + KL++I A D H L + Sbjct: 118 IIKEAVEQIIKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKE 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 D+ +AISY+G +E+ + + G KV+ IT ++ N L + Sbjct: 178 DIAIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSK 219 >UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=Firmicutes RepID=A6LVH8_CLOB8 Length = 282 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 132/265 (49%), Gaps = 3/265 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 L+I+ Y GL+ ++ +ADY+L P + H S L++E V+ S++ +FA+KLGY GF Sbjct: 7 LKIKSLYNGLSAKEQNIADYILENPISVAHNSISYLSDELNVADSTLFQFAKKLGYSGFK 66 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 K+A+ L + + IH +I DD + +K+ N + T + + L + Sbjct: 67 EFKMAI---LIEENNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILGLDDLKK 123 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ ++ + G+G SG++A++ K ++ + D H L +P D + Sbjct: 124 AAEIISNSNLLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLTPQDCAI 183 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS+TG +E A+ + G KV+ IT + L + +I+EE +S ++S+ Sbjct: 184 CISHTGKSKETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFISISEEIEFHSEALSS 243 Query: 245 CHAQGMLTDLLFIALIQQDLELAPE 269 +Q + D L++ L+ + E + E Sbjct: 244 RISQLSILDSLYVILMFMNKEKSKE 268 >UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QW74_CLOBU Length = 281 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 146/281 (51%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y + +S+KK+ADY+L+ S+ +LAN S SSVV+F++KLG+ Sbjct: 1 MNCSLLIKQIYDKMTESEKKIADYVLVNSSEVYKFSASELANITKTSSSSVVRFSRKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L++ + E+ ++ I +D +R V K +N ++ T+++ E Sbjct: 61 EGFQEFKIELAKDDINPVENIE---YDYIDTEDNIREVIVKTANKNIQSINDTISLLDEH 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E + +++A+ I + GIG S L+ + +KL++I NA + H L+ S D Sbjct: 118 TIEEAIKAIKNAKNIYIFGIGESALIGLDLQYKLLRIHKNAMISLESHVQLSMSANISND 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + ISY G +E+ A + G K + IT F N + + E+ Sbjct: 178 DIAIGISYLGKTKEVYSALSKCKEKGAKCITITKFGENPVSSLGDIKIQVPFVEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ Q + D+LF+ L +++ + ++ + ++++L Sbjct: 238 AISSRIVQLTVIDILFVGLAKENFSDVEKYLKETRNMIEEL 278 >UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C6WFA6_ACTMD Length = 304 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 84/271 (30%), Positives = 133/271 (49%), Gaps = 14/271 (5%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L++IR GLA++++++A +L P T H S ++A AG S+++V +F + +G G+ Sbjct: 11 LVKIRSLLPGLARAEQRVAKVVLDNPATVAHRSITEVAESAGTSETTVTRFCKAIGVGGY 70 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT---LNVNSEE 120 P L++AL+ A + I D LR V K+ + A+ T LNV++ Sbjct: 71 PELRIALAADTARTAARTDRDLGGDIGPGDDLRQVVGKVAFADARAVEETAEQLNVDT-- 128 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L V + A R+ + G GAS VA + KL +IG A D H L + + Sbjct: 129 -LQAVVDAVARAGRVDVYGFGASAFVAFDLQQKLHRIGRTCFAWNDTHIALTSAAVLTGA 187 Query: 181 DLLLAISYTGVRRELNLAADEMLRV----GGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 D+ + IS+TG E E LRV G +A+T F + + + A H L T A E Sbjct: 188 DVAVGISHTGSTTETV----EALRVARERGATTVALTNFPRSPISEVADHVLTTAARETT 243 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELA 267 S ++++ AQ + D LFI + Q +E A Sbjct: 244 FRSGAMASRIAQLTVVDCLFIGVAQHHVESA 274 >UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK74_SEBTE Length = 284 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/277 (25%), Positives = 141/277 (50%), Gaps = 6/277 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++++ Y L +S+KK+A++++ + + ++S ++ + V Q++V++F++KLGY F Sbjct: 12 VKLKSVYNDLTKSEKKIANFIMKNFEKTKTMTSYDISKKVNVGQATVIRFSKKLGYSSFN 71 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L +++ + + + N GDD + K+ + + TL +N E Sbjct: 72 ELINSIN-----KLDQEDILEKNISLGDD-IATTNTKIANQYIDVIKLTLELNPVYVFEE 125 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + + +A RI++ GIG S +V+ +F KL ++G NA D H + + +DLL+ Sbjct: 126 VIEAIIAAERIVVLGIGNSAIVSTDFVNKLARVGMNAFTNLDTHLQFSMISNLGKNDLLI 185 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G RE+ AA + ++++IT FT N L + L T + + + ++ Sbjct: 186 LISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTASFDINLRLDATTS 245 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q + D++FI +++ D E I +S+ VK L Sbjct: 246 RITQFTIIDMIFINILKTDFSKYKEIITNSDNAVKLL 282 >UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus suis RepID=A4VXR0_STRSY Length = 275 Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 138/279 (49%), Gaps = 25/279 (8%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + L ++ KL DY+ ++ QLA+ AGVS +++ + ++K+GY F LK+ ++ Sbjct: 11 ENLTPTENKLLDYIEENIHRIETMNIYQLADNAGVSTATISRISKKMGYSNFNKLKIEIA 70 Query: 72 EA----LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 ++ L + +PS D + + KLI T + T++ + E+L V Sbjct: 71 KSKYDDLLNAHFTPS----------DSIDDISTKLIHSITISNQQTVSFLNLEELEAAVK 120 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +L+SA RI L G+GASG+V +F +KL +IG +D H +A + + DL + IS Sbjct: 121 LLQSASRIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAGNGDLAIGIS 180 Query: 188 YTGVRRELNLAADEMLRV----GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 Y+G+ +E+ E LR G + ITG N L A E +I+ Sbjct: 181 YSGMTKEV----VEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELRVGAIT 236 Query: 244 ACHAQGMLTDLLFIALIQ---QDLELAPERIRHSEALVK 279 + LTDLL++ALIQ Q++ E+ +H ++K Sbjct: 237 SRSNSLFLTDLLYLALIQDHKQEITAILEQTKHLTEVIK 275 >UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TJ91_CLOBB Length = 285 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 141/277 (50%), Gaps = 15/277 (5%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI Y L ++KK+A Y+L P H S +LA + S+++V + KLGYKG+ Sbjct: 10 LERITNIYSELKGAEKKVAQYVLENPKNIIHFSITELAEVSKASEATVFRLCSKLGYKGY 69 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ L+ ++ P I+ +++ +D ++ K++ N ++ +TL +N E L Sbjct: 70 QDLKINLAGSVIE----PIDNIYEEVKENDDTYIIMRKIMSSNINSIESTLKINKTEDLD 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + ++ +A++I+ G+G S +A + K ++ G + A D H + ++ D + Sbjct: 126 KAIAIILNAKKIMFFGMGGSWTIANDAYHKFIRTGIDCVASCDSHWQVMFSSMANSGDAI 185 Query: 184 LAISYTGVRREL----NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +A S +G +EL NLA + G K++AITG + L + + L E S Sbjct: 186 IAFSNSGSNKELVENINLAK----KRGIKIIAITGNEKSPLAKISDLHLIAYGNESMFRS 241 Query: 240 ASISACHAQGMLTDLLF--IALIQQDLELAP-ERIRH 273 ++ + M+ D L+ +A+ ++D L ERIR+ Sbjct: 242 EAMESRLTSLMIVDWLYVGVAIKRKDKTLGNLERIRN 278 >UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I531_9CLOT Length = 284 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 135/269 (50%), Gaps = 1/269 (0%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L +++ K+ DY+ +++ +++ ++AN GV +++V +F +KLG++ F K+ +++ Sbjct: 12 LTKAENKICDYIEEYMNSSIYMTVTEIANNCGVGEATVTRFCRKLGFRSFLEFKMTMAQE 71 Query: 74 LASQPESPSVPIHNQIRGD-DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + I +++ + D L +K + N ++ TL + E +L A Sbjct: 72 FKNSGYDNEDIIESEVVSENDSLGEFVKKFYEINVNSLEETLKKIDYSMIEEISDILVKA 131 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 +RI TG+G SG++A++ +K MKIG RD H L+ D+L IS +G Sbjct: 132 KRISFTGVGHSGIIAEDAYYKFMKIGLICNCYRDSHTLVMMASLMKEGDVLFIISNSGNT 191 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 E+N+AA+ KV++IT + L + + + L +E + S +Q L Sbjct: 192 EEINIAAEIARENNVKVISITENLLSKLARVSDYVLNYTDQEIKIDMESFGIRISQNFLI 251 Query: 253 DLLFIALIQQDLELAPERIRHSEALVKKL 281 DL+ +I+++ E+A +E ++KL Sbjct: 252 DLICTNVIRKNKEIAVVSKSKTEKAIEKL 280 >UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseriaceae RepID=D0W145_NEICI Length = 315 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 120/233 (51%), Gaps = 7/233 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +I + L+ +++K+A+ L +P H + ++A + VSQ +V++F + LGYKG Sbjct: 2 LSKISESLADLSGAERKVAECALAKPKWFVHAAVAEIAEHSSVSQPTVIRFCRSLGYKGL 61 Query: 64 PALKLALSEALASQPESPSVP-IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ + +P +H ++ DD + V EK++ A++ E +L Sbjct: 62 PEFKLALSASIGHE----GMPYVHEELNADDDMSSVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S +D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSSEDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 L+AIS TG EL A G ++A+T + L Q A C+ +IA ++ Sbjct: 178 LIAISNTGSSIELLDAVSIAKENGASIIALTR-NESPLAQMAD-CVLSIATQE 228 >UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator n=24 Tax=Neisseria RepID=A9M040_NEIM0 Length = 282 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 7/233 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +I + L+ +++K+A+ L +P H + ++A A VSQ +V++F + LGYKG Sbjct: 2 LSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKGL 61 Query: 64 PALKLALSEALASQPESPSVP-IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ + +P +H ++ DD + V EK++ A++ E +L Sbjct: 62 PEFKLALSASIGHE----GMPYVHEELNADDDMASVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 L+AIS TG EL A G V+A+T + L Q A C+ ++A ++ Sbjct: 178 LVAISNTGSSIELLDAVSIAKENGASVIALTR-NDSPLAQLAD-CVLSVATQE 228 >UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YX9_LACSS Length = 280 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 134/255 (52%), Gaps = 13/255 (5%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R Y ++ K++ADY+ + + L+ Q+ A GVS +++ +FA+ LG+ F A Sbjct: 9 LRSYYDNFSEKYKQIADYIFQESQFNQRLTIQEFAANCGVSTATISRFAKILGFDNFQAF 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+AL LA E+ + P+ ++I +D + EK+ N+ A+ AT ++ +EE+L + V Sbjct: 69 KMAL---LA--KEANTSPLFHEINANDTFTTMAEKIFSSNSNALKATWSLLTEEQLQKAV 123 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ A + L G+GASG+VAQ+ K ++ +D H L + D + I Sbjct: 124 ALINRAHLLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDYHLQLMQATKLTNQDCAIII 183 Query: 187 SYTGVRRELNLAADEMLRVGGK----VLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 S++G ++ A E+ R+ + ++ IT F ++L + L +I+EE + ++ Sbjct: 184 SHSGQNKD----ALELARILKERQVPLIVITSFGNSSLAKLGDITLLSISEETNYRAEAL 239 Query: 243 SACHAQGMLTDLLFI 257 A AQ L D LF+ Sbjct: 240 HALIAQISLIDSLFM 254 >UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KLH9_PECWW Length = 320 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/272 (27%), Positives = 139/272 (51%), Gaps = 2/272 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 GL+ +++ +A+Y+L P L ++LA E GVS++++V+F + +GY G LK AL+ Sbjct: 45 HGLSDTNQTIANYVLQNPSMVAQLPVKKLAVEIGVSEATIVRFCKHIGYAGLLELKSALN 104 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 L + S+P+ I +D V +K+ A+ T+++ + +++ V++ S Sbjct: 105 RELFDDSD-LSLPVTPDILMNDTRHDVAQKIALTVDRAVKETIDLIDMQTINQIVSLFIS 163 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 ARR++ G GASGL A K+ +IG ++ A D ++ + PDDL++A S++G Sbjct: 164 ARRVMFIGFGASGLAALEARDKMNRIGIDSDAFTDRFSMTLKLANLKPDDLVVAFSHSGE 223 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E+ A + G LAIT T + L ++ L T E + SI +Q + Sbjct: 224 TPEVVNAFKLAEKAGATRLAITHSTHSPLTSLGNYVLLTCGESERYQGDSIGTRVSQLFM 283 Query: 252 TDLLFIALIQQDL-ELAPERIRHSEALVKKLV 282 + L L +Q+ + + + I L+K+ + Sbjct: 284 IEFLCTELTKQNFKDFSSQSISIKALLIKERI 315 >UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4M2_9CLOT Length = 282 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 133/255 (52%), Gaps = 5/255 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR +Y L+ S K +ADY+L PD + ++A VS+++V++F KL Y + Sbjct: 9 IRTKYNTLSSSQKDVADYILTNPDKVMMNTLNEIAAACRVSETTVLRFLHKLNYNSYQLF 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 ++ L++ L+ + +++ + D + +K+I +++ + + + V Sbjct: 69 RINLTQELSKDNQET---VYDDVGFQDTEDEIIDKIIHSTVSSITDSRQIIDPASVKAVV 125 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + ARRI++ G+GASG +AQ+ KL+K+G NA D H + + +L+ Sbjct: 126 EKIAGARRIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQNTILILF 185 Query: 187 SYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S++G RE L++AA R +V A+T + + L +A + L + + E S ++++ Sbjct: 186 SHSGESREVLDMAAIAKER-RCQVCAVTSYAKSTLANQAGYLLCSSSRETMFRSDAMTSR 244 Query: 246 HAQGMLTDLLFIALI 260 Q ++ D+L+++L+ Sbjct: 245 IVQMVIIDILYVSLV 259 >UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=Gammaproteobacteria RepID=C4L7F8_TOLAT Length = 292 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 141/276 (51%), Gaps = 4/276 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +IR GL+ +++++A++LL + + S + +A + VS+ +VK ++KLG+ GF Sbjct: 14 KIRMALPGLSNTERQIAEWLLAKGNVESKTSIKSVAEQLEVSEPLIVKLSKKLGFAGFRE 73 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L+ AL E L+S P + +I D + V K+ + AM +V + Sbjct: 74 LRQALVEYLSSLP----IDSEQEIEPTDSVESVLNKVFANSIQAMKEARSVADPILIANA 129 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 ++ +A+ +++ G+G S V Q+F KL++IG + A D H +L +D+++ Sbjct: 130 AQLIFNAKNVVIFGVGGSAAVCQDFEHKLLRIGILSRAYSDFHMMLMVSSQLDENDVIVV 189 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G REL A + + +V+ IT +AL Q A + +++ A+ + A Sbjct: 190 ISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQLADYAIFSPAKGGILLGQNAVAR 249 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q L D+LFIA++ QD + E++ +V+ L Sbjct: 250 IVQLNLLDVLFIAILLQDHDKNREKLTRGSRVVRHL 285 >UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF8_9LACT Length = 283 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 136/273 (49%), Gaps = 4/273 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RI+ L S++K+ +Y+L P+ +++ QL A + ++V++ ++G Sbjct: 5 NILGRIKSVLDDLPNSERKIGEYILTYPEETIKMTTSQLGIAAESNSTAVIRLCNRIGVN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ LS + S ES + +I ++ + + KL+ +M T+++ +E Sbjct: 65 GFTKLKVNLSAEIVSVDESG----YAEIEAEETIGTIKNKLLTNAFKSMEETISLMNEFD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ SA + + G+G S ++A+N K ++G D H L++ + A+ + Sbjct: 121 IERVIELIESASMVYVYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAPKNA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L IS +G RE+ + K + +T F N+L +A + + T+ ++ + Sbjct: 181 LFFGISNSGETREIIELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDSQFI 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 S+ HAQ + D+LF + + ++ ERI+ S Sbjct: 241 SSSLHAQLIAIDVLFYSFLSKNYVAGTERIKQS 273 >UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=A2RL41_LACLM Length = 283 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 142/283 (50%), Gaps = 5/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ LL IRQ Y +KK+ADY+ + S+Q++A+E G S +++V+F++KLGY Sbjct: 1 MDTLLIIRQNYSNFTTVEKKIADYIFEVGEKMLEKSAQEVASEIGSSSAALVRFSRKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SE 119 GF LK LS + A + + ++ + + KL K M T N S+ Sbjct: 61 DGFSQLKQKLSASYAVHEDDE--DYYKEVNDSETPSSIKNKL-KVRVNHMVETTNAALSD 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +++ V ++ A I + GIGAS +VAQ+ K +IG ++D H ++++ S Sbjct: 118 DEIMAAVALIDEAESIFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSISDR 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATN 238 + + IS G +E+ A + + ++AIT + L Q + + L++++ E+ Sbjct: 178 KTIFIGISMKGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILHSVSGEDYQMR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A+ + AQ + D+LF + + + +++ + +K L Sbjct: 238 TAATMSLMAQLYVVDILFYMFVSEHFTESYDKLEKTRDAIKLL 280 >UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8M2_9ACTN Length = 291 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 139/265 (52%), Gaps = 3/265 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++R+R+ L ++K +A Y+L P + LS + LA + VS ++VV+ + +G++ Sbjct: 3 NIIIRLRENIGFLNPAEKAVARYVLQCPHESNRLSVKALAARSFVSPAAVVRMCKSIGFE 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQ-IRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K L+ LA+ E +P+ + I+ +D L + +K+ +N ++Y L + E Sbjct: 63 GFKEFKTELTRELAT--EKLILPLDTKDIKQNDTLESIIKKITLKNIHSLYDALRLIDPE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V +L++ RI+L G+GAS + A++ K +++ D H L T + S+ Sbjct: 121 TIEKAVELLQACDRILLFGLGASLIAAKDANLKFLRVNKTCLINDDWHLQLITARNSTSQ 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + ISY+G E A+ + ++AIT + + + A LYT + E SA Sbjct: 181 DVGIVISYSGQTAETLTCAEILKHNNTPIIAITRCIESPISKLADVLLYTTSNESLFRSA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 ++S+ +Q + D+L+ A D E Sbjct: 241 AMSSRISQLNIIDILYTAFAVSDYE 265 >UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALE3_SEBTE Length = 282 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 133/264 (50%), Gaps = 2/264 (0%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I + S+ K+ +Y+ P++ ++ ++L+N ++++++F +K G+KG+ Sbjct: 11 KINSLKKSFTASETKVFNYIEKNPESVVRMNIRELSNAIDTGETTIIRFCKKTGFKGYND 70 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K++L +L+ + +S I I D+ + E + + + TL++ + E L +C Sbjct: 71 FKISLISSLSKEKQSNKYKI--DILADENYNSIAEGIYNNSFNVLKDTLSLINNEILDKC 128 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + ++ +A+ I GIG S L AQ+ +K ++IG + A+ D H S +D+++ Sbjct: 129 INLINNAKHIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPHLFKMAASISDREDVIIG 188 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS TG RE+ + G K +AIT + + A + L E+ + S S Sbjct: 189 ISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVLLNGFNEELLETGSFSER 248 Query: 246 HAQGMLTDLLFIALIQQDLELAPE 269 +Q + +LL++ ++ ++ + A E Sbjct: 249 ISQLFIIELLYLGVLSKNKDKAME 272 >UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulator TTE0211 n=3 Tax=Clostridia RepID=Y211_THETN Length = 282 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 4/256 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR+ S+ K+A Y+L P LS +LAN S++S+++F + +G KGF L Sbjct: 8 IREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLKGFQEL 67 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ ++ +LA Q + I +D + V +K+ N A+ +T+ V + E+L + Sbjct: 68 KIKIAVSLAKQTR----KLDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEELTKAA 123 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 L +A +I G+ ASG+VA + K +I A +D H L + D+ I Sbjct: 124 EALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKKGDVAFGI 183 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 SY+G +E+ A G +++T + + L + A L+ +EE + ++++ Sbjct: 184 SYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGAMASRI 243 Query: 247 AQGMLTDLLFIALIQQ 262 AQ + D+LFI + Q+ Sbjct: 244 AQLTVIDILFILVAQK 259 >UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DKU0_9LACO Length = 284 Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 146/284 (51%), Gaps = 8/284 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI + Y L +S + +AD +L P + +++++ N S +SV++F ++L Y Sbjct: 1 MNVRDRILENYTELKKSSRIIADAVLENPKILLNKNAKEIGNYTNTSAASVIRFCKQLNY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL---IKENTAAMYATLNVN 117 KG ++ L+++ Q + PI + DD V KL + +N + T+++ Sbjct: 61 KGLKDFQIDLAQSTVKQSQLK--PIDMIVTKDDKADEVMTKLRVSLSQNFEDLSKTIDI- 117 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + L + V++++ +R + + GIGAS A++ +KL++ G D+H L + S Sbjct: 118 --KDLQKAVSLIKKSRAVYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYS 175 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +P D+++ SY+G+ +EL LA + + ++A+T + + L + A L E Sbjct: 176 TPKDVMICFSYSGLTQELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLM 235 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ AQ ++++L++ I DL + + + L++KL Sbjct: 236 RVGAINSTFAQMFISNVLYLCSISSDLGEVKQEMEATGKLLEKL 279 >UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7MQM6_SACVD Length = 333 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 8/266 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+RIR GLA++++++A +L P + S ++A A S+++V +F + +G G+ Sbjct: 40 LVRIRSLLPGLARAEQRVAKVVLEDPSSVARRSITEVAMAAKTSETTVTRFCKAIGVGGY 99 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 P L++AL+ A S + I DD L V K+ + A+ T +L Sbjct: 100 PQLRIALAADTARTEAKSSRDLGGDITADDDLASVVSKVSFADARAVEETAEQLDIAELT 159 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 +L A R+ + G+GAS VA + KL +IG + A D H +L + S D+ Sbjct: 160 RVTELLAEATRVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEGDVA 219 Query: 184 LAISYTGVRRELNLAADEMLRV----GGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +AIS++G + E LRV G +AIT F + + A H L T A E S Sbjct: 220 VAISHSGATTDTV----EALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRS 275 Query: 240 ASISACHAQGMLTDLLFIALIQQDLE 265 + ++ AQ + D LFI + Q+ ++ Sbjct: 276 GATASRIAQLTVIDCLFIGVAQRRMD 301 >UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulator TM_0326 n=7 Tax=Thermotogaceae RepID=Y326_THEMA Length = 280 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 136/264 (51%), Gaps = 4/264 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLG 59 M+ + RI+++Y ++KK+AD +L P S L+ +AGV S++SVVKF +KLG Sbjct: 1 MDVIQRIKEKYDEFTNAEKKIADTILSDPKGIIESSISDLSEKAGVKSEASVVKFYKKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ L+++++ +P ++ + +D + + EK+ K A+ TLN Sbjct: 61 LNSFQQFKVLLAQSIS---RAPLEIVYEDVSSEDDTKTITEKIFKATVRAILDTLNWLDI 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + V + ++A+RII G AS VA + K +IG N D H + A + +SP Sbjct: 118 DSIERTVDLFKNAQRIIFIGFAASAAVAFDAFHKFTRIGKNCLFSNDEHIIAAILATASP 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DLL+AIS+TG + A + + V+ ITG + L + + L T +E + Sbjct: 178 SDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETKIRT 237 Query: 240 ASISACHAQGMLTDLLFIALIQQD 263 ++++ Q ++ D ++ L +D Sbjct: 238 DAMTSRIVQLVILDTIYTLLAARD 261 >UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=Gammaproteobacteria RepID=B4EZY5_PROMH Length = 295 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 10/269 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R+ QR +ADY+L P LS QL+ +++VV+F + LGYK Sbjct: 23 NSLTRVSQR----------IADYILFHPTEVTQLSIAQLSQATKAGEATVVRFCRTLGYK 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L+ +A+ S + ++ D + +G KL + TLN+ ++ Sbjct: 73 GFQDFKMDLAIEMATSDNDESPILDAEVSHQDDIHTIGLKLQATINNVLSETLNLLDMQQ 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L SA + + G+G+SG+ A++ KLM+IG+ AV + H + D Sbjct: 133 VQGAVNALLSANYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNHFMYMQASLLKSGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E A G +A+T + + + A H L + S Sbjct: 193 VAIGISHSGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHLINGNRQGKLQGDS 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPER 270 I AQ + DLL+ L+Q E E+ Sbjct: 253 IGTKTAQLFVLDLLYTLLVQAKPETVKEQ 281 >UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=Bacteria RepID=A6LRF3_CLOB8 Length = 294 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/281 (25%), Positives = 140/281 (49%), Gaps = 8/281 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I+ Y L S+KK+ADY+LL + ++ +L+ + GVS+ ++++F + +G G+ Sbjct: 10 KIKNMYNLLRSSEKKVADYVLLNGHSVSTMTLAELSRQVGVSEPTIIRFVKSIGCSGYSE 69 Query: 66 LKLAL-----SEALASQPESP-SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 K+AL E++ Q +S V +H I D+ + V K+I A+ TL + Sbjct: 70 FKMALMKEWGRESVDKQYDSKLLVELH--IDRDEKIEDVPVKMIGLTIKALEDTLKIIDI 127 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 K + + M+RS+ I + G+G SG VA + K ++IG A D + + Sbjct: 128 NKYKKAIEMIRSSNIIDVYGVGNSGSVASDIRNKFLRIGLECRAYSDSNIQQICASHLTS 187 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL + +S++G + A G + +A+T F A+ + A +T EE S Sbjct: 188 NDLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYADITFFTGGEETTFYS 247 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + +Q + D+L++ ++ D +L +R+ L+K+ Sbjct: 248 ETMVSRISQLAIVDMLYMGILLDDYDLYTKRLEKINLLLKE 288 >UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=Enterococcus RepID=C0X6G8_ENTFA Length = 283 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 134/271 (49%), Gaps = 4/271 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + IRQ+Y+ ++ +K++ADY+L P L++ ++A+ + S +SV +F+++LG+ Sbjct: 1 MEPIRSIRQKYKDFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + LKL+++ A+ + PI D + + E L+ ++ T++ + Sbjct: 61 DSWEELKLSIAAVQAASNGKKDIDPIVAADDSVDTICMKVESLLNATIEDLFYTVD---K 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + ++ A +I L GIGAS L N K + G A D H +L + ++ Sbjct: 118 QALERAIAHVKKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYATA 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ +SY+G+ +E +A + G V+ IT ++ + L E Sbjct: 178 QDILITVSYSGLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLIRV 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPER 270 +IS+ + + D+L++ IQ DL+ ER Sbjct: 238 GAISSIASSMAIGDVLYLGSIQDDLDTEIER 268 >UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM70_9ACTN Length = 283 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 126/259 (48%), Gaps = 4/259 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +R+R L+ +++LA++LL P A ++ Q+A G++ S+V KF QKLG++GF Sbjct: 8 VRVRALESSLSDKERQLAEFLLADPHKASKMTISQIAQTLGMADSTVFKFTQKLGFEGFR 67 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + LA++ P V IH I + + E + + + ++ T + SE+ + Sbjct: 68 DFR----GELAAEGFDPEVSIHEHITHKSTPKQMAETVFESSIRSLTDTKELFSEQDIIH 123 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ ++ G+G S +VA + K ++ A D H L S+ DD L Sbjct: 124 AAKLIEDCYQLTFYGMGGSSVVAADAYHKFLRTPKRVAYDADFHLQLMRASRSNGDDCAL 183 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 +S++G + A+++ VG + IT + L A CL TIAEE A S S+++ Sbjct: 184 LVSHSGRCIQTIQIAEKLREVGASTIVITSNPSSPLTALADACLVTIAEETAYRSESLAS 243 Query: 245 CHAQGMLTDLLFIALIQQD 263 +Q L D L+ ++ D Sbjct: 244 RISQLALVDALYTIVMFSD 262 >UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W838_ATOPD Length = 304 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 139/273 (50%), Gaps = 3/273 (1%) Query: 1 MNGL-LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M G+ LR+ + + + +++ + DY+L P+ S +LA + S S+VV+ +KLG Sbjct: 1 MRGVRLRLEEYRKNASSAERDIIDYILSDPEAVVGQSIHKLAAQTYTSASTVVRLCKKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ + AL LA +S + + I GD ++ EK+ +N +++ T+ + Sbjct: 61 CGGYKEFQQALIYELAVSNKSNDIAVGGVIAGD-TTDVIIEKVTAKNISSLELTMQLLDA 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + V+++ A I L G+GAS LVA++ KLM++ N D H+ L + S Sbjct: 120 QVVDSVVSLMMQAHSICLFGMGASLLVARDLQLKLMRLNINCNLSDDYHSQLLYAKNMSR 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATN 238 +DL + +SY+G+ RE A G KV++IT G + L R+ + L E Sbjct: 180 EDLAIVVSYSGLTREAIECAWIAKANGAKVISITRGGIDSELIHRSDYVLGVAETEHIMR 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERI 271 S ++S+ AQ + D LF A + ++ E + +R Sbjct: 240 SGAMSSRIAQLNVVDALFAAYVNRNYEKSVKRF 272 >UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T6_9FIRM Length = 277 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 14/277 (5%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +++Q L Q++K +AD+ AR +S QLA+ + QS++++F++KLGY+ F Sbjct: 5 KLKQVQNELTQTEKIIADFFQNHSLEARSFTSYQLADRLNIGQSTIIRFSKKLGYRSFRE 64 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L LS +L + + +I ++ +K+I++ TL N + + + Sbjct: 65 LLEDLSTSLTEEK------VKEEIVVNEGTSSTNQKIIQQYQKMAQLTLEFNPPQVIDQT 118 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V+ L+ AR+II+ G G S L A+ + + +K+G ++ + H + + + P D+L Sbjct: 119 VSALKKARKIIVFGFGNSNLFAEYISNQWLKMGLDSFCSANSHIIFSMLSQFGPQDVLFL 178 Query: 186 ISYTGVRRELNLAADEMLRVGG----KVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS +G E+ AA R+ G V+A+T N L + L T+ E T + Sbjct: 179 ISESGETPEILKAA----RIAGHQNVTVIAMTRIQKNRLHGYSDIVLKTVNYETNTRLNA 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ +Q L D++++ L + D E + I SE L+ Sbjct: 235 MTLRCSQLCLLDMIYLNLYKTDFEHYEKIIAESEKLL 271 >UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n=4 Tax=Firmicutes RepID=A8FIY5_BACP2 Length = 286 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 144/283 (50%), Gaps = 11/283 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR + L+ + KK+A+Y+L P S LA+E S++++ +F +K+GY+ Sbjct: 8 NIFSHIRTTFHSLSPTQKKIANYILENPQKVVLHSISALASECNTSETTIFRFLRKIGYE 67 Query: 62 GFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + ++ +++ +A+ P+S I+ +I D + + K+I+ T ++ ++ + Sbjct: 68 SYQVFRVHVAQDIATNTPQS----IYGEIEASDSVADIKHKVIELTTNSIQDMKHIVEDH 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + ++ A + + G GAS +A + K +++GF+ + D H + ++ Sbjct: 124 AVTQFIEQMKQAHKTVFFGAGASSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHATEH 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++AIS++G RE+ A G K+ +IT + + L +R+ L + + E S Sbjct: 184 DFIVAISHSGESREILDAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYRSD 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLEL---APERIRHSEALVKK 280 S+ + Q ++ D+L++A + LEL A E ++ S V K Sbjct: 244 SMISRINQLVIIDVLYVAAV---LELGSNAIENVKRSRLAVAK 283 >UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHI8_9LACT Length = 281 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 142/285 (49%), Gaps = 9/285 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +I+ ++D+ +A+++ + ++++L + S ++ V+F++K+GY Sbjct: 1 MSVLYKIKSSMSAFTETDRSIAEFVFVNRQVVLESNAKELGDMTKTSAAAWVRFSKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLV---GEKLIKENTAAMYATLNVN 117 KG PA K+AL++ +Q + I + D L + E ++ +N ++ L+ + Sbjct: 61 KGLPAFKVALAKE--TQSYTNEDDIETFLNPQDSLMGLLQKTENMLTQNIRETFSLLDYH 118 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + EK + + A+ + L G+G S +V +F K+ +I N RD+H L+ + Sbjct: 119 ALEK---AIEFIHEAKTVFLLGVGGSSIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQL 175 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQA 236 +D++L ISY G +N A +G +++ +T + + L + L+ EE+ Sbjct: 176 DKNDVVLVISYNGETESVNSIAKVAKTMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKE 235 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI++ ++ +TDLL+ + + D + + + + +K++ Sbjct: 236 IRLGSITSRNSLLTITDLLYYGIAKTDFNVTKDLLVRTRQFIKEV 280 >UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04DU1_OENOB Length = 282 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 6/251 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR Y+ L +K++ADY+L D+ + Q L+++ G+S +S+ +F + LGY F Sbjct: 8 IRSYYEKLHPGEKRIADYILSHQDSVMDATIQSLSDKIGISTASISRFTRHLGYPNFRDF 67 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL-NVNSEEKLHEC 125 +ALS AS+ S S +I+ D + +KL AA+ AT N+N ++ L Sbjct: 68 LIALS---ASKKNSSS-DFFTEIKQSDQSEQIVKKLFSAGIAALTATAANINMKD-LDRV 122 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V L S+ +I GIG S +VA N K ++ N + D + + +DL + Sbjct: 123 VDWLVSSNKIGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTSEDLGIV 182 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++G ++ L +++ G K++AIT F + + + A L + +EE S+S+ Sbjct: 183 ISHSGRNQDTLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEEVNFRQESMSSL 242 Query: 246 HAQGMLTDLLF 256 AQ + D LF Sbjct: 243 VAQITIIDTLF 253 >UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EB66_BRASB Length = 270 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 130/259 (50%), Gaps = 10/259 (3%) Query: 19 KKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQP 78 +++A+ + QP+ H S ++A VS+ ++V F +++G +GF LK+ L+ L Sbjct: 10 RQIAELIAAQPEPFVHKSITEVAEACDVSEGTIVSFCRRVGVRGFQELKIMLARDLIEPV 69 Query: 79 ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT 138 +H RGDDP V + + + A++ T + S E L E +LR A+RI + Sbjct: 70 RLIQEDLH---RGDDPA-TVTDHIFAAHAASLQETRRLLSMEALAEATRLLREAQRIEIY 125 Query: 139 GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLA 198 GIG+S +AQ+ +++L+++G A A+ D H + + P + +S++G E LA Sbjct: 126 GIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTGPGVATVTVSHSGSTVETVLA 185 Query: 199 ADEMLRVGGKVLAITGFTPNALQQRASHC---LYTIAEEQATNSASISACHAQGMLTDLL 255 G + + IT + L A+HC LYT+A E ++S+ AQ + D L Sbjct: 186 TRLAQAAGARTIGITRLGKSPL---AAHCEVLLYTVANETRYRPEAMSSRVAQLAIIDTL 242 Query: 256 FIALIQQDLELAPERIRHS 274 D E + R++H+ Sbjct: 243 VSCCALTDTERSVGRLQHA 261 >UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=Actinomycetales RepID=A8LV24_SALAI Length = 320 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 142/273 (52%), Gaps = 3/273 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L R+R L + +++A+++L P+ A + +LA +G S +++ +F + +G++G+ Sbjct: 34 LARVRAGADDLTGALRRVAEHVLSDPEAAARATIVELAERSGTSPATITRFCRAMGFEGY 93 Query: 64 PALKLALS-EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+L ++ E ++ +V I +I+ DPLR V +++I +T AM+ T + ++ Sbjct: 94 ADLRLGIAAETGRARLAGWTVDIGREIQPGDPLRRVLDQIIAADTRAMHDTAALLDLAEV 153 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + A R+ + G S LV + + L +IG A A D+H LA+ D+ Sbjct: 154 ERAAVAIAGASRVNIFGASGSALVGEEMQFMLHRIGVAAWAWSDVHEGLASAALLRVGDV 213 Query: 183 LLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L +S++G RE + + A+ R G +A+TGF + L + A L T + + Sbjct: 214 ALGVSHSGQTRETIEMLAEAGSR-GATTVAVTGFPRSPLAELADIALLTASRATTFRPDA 272 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 +SA H Q ++ DLL+IA+ Q+ + A +R + Sbjct: 273 LSARHPQLVVLDLLYIAVAQRTHDRAHAALRRT 305 >UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3D9_THELT Length = 276 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 127/252 (50%), Gaps = 13/252 (5%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I+ + + + +LA +++ PD H+S ++ +E + Q +VV+F QKLG+ GF Sbjct: 9 IKANQKQFTKKENELAQFVIDHPDEVIHMSITEIVDELRIGQGTVVRFCQKLGFSGFHPF 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIK--ENTAAMYATLNVNSEEKLHE 124 K+AL+++L Q E+ D L +V E IK E T+ + L +N E+ +++ Sbjct: 69 KIALAKSLGRQEEASE-------GSKDMLAMVKEDHIKAIEETSKL---LKLN-EKVVYQ 117 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 C + + RR+ L G+GASG+ A + +K M+IG + + D H ++ + D ++ Sbjct: 118 CAEKISNCRRLYLLGVGASGVTALDAYYKFMRIGVDVKYMLDPHFQAMSLSGCNEKDCVV 177 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S +G + A + V+A+TG+ + L A L T E S +I + Sbjct: 178 AFSQSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTFYADFVLLTAVRENPFQSGAIRS 237 Query: 245 CHAQGMLTDLLF 256 AQ + ++LF Sbjct: 238 KIAQLHVLEVLF 249 >UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJF9_BREBN Length = 297 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 4/266 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I+ +S++K+A +L Q D+ + S LA +AGV +++V++F +K+G+ Sbjct: 20 NTLLHIQSLLPSFTKSEQKVAHIVLQQTDSVIYSSVIDLAEKAGVGETTVLRFCRKIGFH 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL++ L + P +H ++ DD L ++ K+ N A+ T + E+ Sbjct: 80 GYQEFKLALAQELVN----PVKNLHGEVGEDDSLDIITHKVTATNQQAIGDTSALFQLEQ 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV +L+ A I G+G S + AQ+ + ++IG A + H P D Sbjct: 136 LERCVDLLQKANTIHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLGPGD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G ++ + + G + +T + + + A L T A+E S Sbjct: 196 VAIGLSVSGSTKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQGGS 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELA 267 ++A AQ + D++ + ++ E A Sbjct: 256 LAAKIAQLHVLDVISTTITMRNKEKA 281 >UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n=51 Tax=Bacillus RepID=A8FJ30_BACP2 Length = 285 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 133/259 (51%), Gaps = 3/259 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 ++ + +IR +GL K +A+++ +P HLS +LA + S++++ + ++LG+ Sbjct: 6 LSSIEKIRAASRGLPPKLKAIAEHITSEPRDIIHLSIVELAKKTASSEATIFRLCKRLGF 65 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK+A+++ + ++ + ++ DD + + +K+ + N +A+ + + + E Sbjct: 66 EGFQDLKIAIAQEI---DQTKPNYVDEEMSLDDDMAVFMQKVFQTNISALKDSFQLLNPE 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + ++ A+R+ G G SGL+A + K M+ G N D H + Sbjct: 123 DVEKAIQIIHEAKRLEFYGSGGSGLIATDAFHKFMRTGINCIVHTDSHFQAMSAGLLDQH 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++ IS++G ++L A G K + IT + + L Q A LYT +E A + Sbjct: 183 STVIGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLADVTLYTATQETAFRTE 242 Query: 241 SISACHAQGMLTDLLFIAL 259 ++SA AQ + D+L+ AL Sbjct: 243 AMSARLAQLTVIDVLYFAL 261 >UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBX8_9LACT Length = 285 Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 11/283 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL IR++ L QS+KK+A+ +L P +S+ LA EAG S ++V++F + +G K Sbjct: 4 NVLLTIREKKITLPQSEKKIAETILRDPVKVIQMSATDLATEAGSSSAAVIRFCRSIGIK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS + + ++ I D+ L V +K++ T NV ++ Sbjct: 64 GFTELKLQLS----ADSQGIKDNLYTDILADENLEQVKKKMLINTNHLFKETNNVLDTKQ 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + I L G+GAS +VA + K ++G D H L+ ++ + + Sbjct: 120 IERVSELLHESSIIYLYGLGASHIVASDIQQKFSRMGKIVVCSLDQHLLVTSMAVAGENA 179 Query: 182 LLLAISYTGVRRE---LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQAT 237 + +S +G ++E L + A E+ G K +A+T T NAL A L T A E Sbjct: 180 VFFGVSNSGEKKEVLALMIMAKEL---GLKTVALTNNTENALSLEADIALKTAFAHEAPL 236 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S + + Q D+LF ++ +L + S+A +++ Sbjct: 237 RSGATISLLTQMYAVDILFYDYASKNYDLTVTNLEKSKAAIQR 279 >UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMQ5_CLOPH Length = 285 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 8/276 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++ R L S++K+A Y L + + +LA E+GVSQ + ++F + +G+ G Sbjct: 6 IKTRSIMDSLNNSERKVATYFLNNIENIFSIPIARLAEESGVSQVTWIRFCKAIGFDGLK 65 Query: 65 ALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK +L L +S E + I+ L + + A+ T+ + + L Sbjct: 66 DLKKSLFMELNSSTSEGIDTSDFSDIKKHSTLEQMCNTIRNTTLQAVEDTIKLIDYDTLK 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + V++L A I L G+GAS LVA +F KL++I N DMH L + P+D+ Sbjct: 126 KVVSILSKASCIKLFGVGASALVADDFCKKLLRINKNVNFSYDMHTQLVYGANARPEDVA 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + SY+G +E+ D + + IT +T + L A + +Y A E S ++S Sbjct: 186 VIFSYSGTTKEMLEIMDLAKKSNCPTIVITKYTKSPLVASADYSIYISAPEINYRSGAMS 245 Query: 244 ACHAQGMLTDLLFIAL-------IQQDLELAPERIR 272 + AQ + DLLF +L +++ LE + E R Sbjct: 246 SRIAQLTIVDLLFTSLANKNYTSVEKYLEKSSEVCR 281 >UniRef50_D2AR91 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AR91_STRRD Length = 299 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 71/282 (25%), Positives = 140/282 (49%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 +N + +R L + + +A +L P + + + +G S++++V+ A+ LG+ Sbjct: 10 VNLVATVRAVLPSLTPAAQAIARLILDDPGMVARSTITEFSAVSGTSEATIVRTARALGF 69 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L+ AL+ A+A E P + + DDPL V K+ + + A+ T + + Sbjct: 70 AGYSQLRFALAAAVAR--EEPERLVPGDLGPDDPLTDVIAKVTRAESEALADTAAQLNPD 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L V + +ARR+ + G+GASGLVA + A KLM+IG ++ A D H L + Sbjct: 128 RLGAVVEAMTAARRVDVYGVGASGLVAADMAQKLMRIGRSSHAFTDAHLALTSAALLGEG 187 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + +S TG ++ + G +AIT ++L + A H L + E A Sbjct: 188 DVTVGVSCTGETPDVIAPMRVARKAGATTVAITNNPRSSLAELAEHVLVSAGRETAFRPG 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++++ +Q ++ D +F+ + Q+ E + +R + + + + Sbjct: 248 ALASRISQLLIVDCIFVGIAQRTFETSDAALRATRGALDEFM 289 >UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169311A Length = 267 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 125/235 (53%), Gaps = 23/235 (9%) Query: 1 MNGLLR-IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ LL+ I+ +Y ++ +KK+AD+LL P A +++A++ GVS +S+ +F++K+ Sbjct: 5 MDSLLKTIQSKYSSFSEKEKKIADFLLSSPAAAAQCHIKEIADQTGVSVASITRFSKKVL 64 Query: 60 YKGFPALKLALS-EALASQPESPSVPIHNQIRG--DDPLRLVGEKLIKENTAAMYATLNV 116 + F LKL L+ E+ + V + NQ + +D L+ EN Sbjct: 65 CQSFVELKLKLARESYDHTKDELDVELKNQYKEMFNDIESLI------EN---------- 108 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 E L E +++++ A+R+ + G+G+SGL AQ F ++L ++GF + AV D H ++ Sbjct: 109 ---EPLKEVLSLIKKAKRLFIYGLGSSGLAAQEFNYRLSRMGFYSEAVTDPHLMIIRSVL 165 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 DD+++A S +G ++L + + K++A T F L + A ++TI Sbjct: 166 LEKDDVVIAFSRSGQTKDLLKSLEAAKGKKAKLIAFTAFGDTPLTKMAHKVIWTI 220 >UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BD8 Length = 265 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 5/261 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 LA Y++ + +LA + S +++ +F + L ++GF KL LS LA QP Sbjct: 2 LASYIVEHAHEVVSMGITELAERSQTSPATISRFCKSLHFQGFTDFKLKLSGELAKQPSE 61 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 S + I +PL + + + ++ T +N ++L + V+ L++AR+I L G+ Sbjct: 62 HS---YQDIVAGNPLSEIVSAIEANHLRSIADTTQLNDIKQLQQAVSALKNARQIDLYGV 118 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 SG+VAQ+F KL++IG + D H + + +D++ AISY+G E A Sbjct: 119 ATSGIVAQDFYQKLVRIGKRTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQALR 178 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 G +++T F N L + L+ E+ +++ AQ + D+LF +L+ Sbjct: 179 CAKERGAVTISLTKFGTNPLANLSDIRLFASTLEEGMRRGDMASRIAQLHVIDILFTSLV 238 Query: 261 QQDL-ELAPERIRHSEALVKK 280 ++ EL P R+ S LV+K Sbjct: 239 SEEFDELIP-RLERSYQLVRK 258 >UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulator CA_C0191 n=5 Tax=Clostridia RepID=Y191_CLOAB Length = 283 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 2/271 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+RI++ L S++K+A+Y+L LS ++LA ++G S+S+VV+ + L YKG+ Sbjct: 5 LIRIKEIINDLNPSERKIAEYILNNSKAISDLSIKELAGKSGSSKSAVVRLCKILNYKGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++A+++ + + + + I D L + + + N ++ T+ V SEE + Sbjct: 65 KEFRIAIAKDTVNVDKEENR--YTDINPKDDLHTIIKNISYNNKKSIDNTMEVLSEELVE 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + A R+ GIGAS +VA + K M+I N A D H + D+ Sbjct: 123 KASEAISKAYRVDFYGIGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKGDVA 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AISYTG ++ + G +++T F N++ L+ ++ E S ++S Sbjct: 183 VAISYTGETKDTFESIKAAKEAGATTISVTKFGSNSISDLCDINLFVLSPEITFRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + AQ + D+LF ++ + E E + ++ Sbjct: 243 SRIAQLNVIDILFTSVAGRMFEEVKEFLENT 273 >UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6X6_RUMHA Length = 297 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 130/248 (52%), Gaps = 20/248 (8%) Query: 16 QSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALA 75 ++++K+A YLL D + H + +LA+E GVS +S+V+F + +GY GF K+ + AL Sbjct: 34 KTERKIAAYLLGNFDKSLHSTLLELADEIGVSDASIVRFCKSIGYTGFQEYKI--NAALQ 91 Query: 76 SQPE----SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 S PE +PS+ + D+P + +K+ ++A+ T +++ +L Sbjct: 92 SVPEPRLYNPSLSV-----DDNPAEIC-DKIFAIESSALEQTKQELDISVMNKVADVLLK 145 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 ARRI L G G S + A++F KL+KIG A D L + + +D+L AIS++G Sbjct: 146 ARRINLVGTGGSAISARDFQHKLLKIGVRAELQEDKDLQLMSASLLTEEDVLFAISHSGS 205 Query: 192 RRELNLAADEMLRV----GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 NL E + + K++ +T + N L ++A + LY ++E+ S S SA A Sbjct: 206 ----NLHVAETIELAQKRNAKIITLTMKSKNILVEKADYPLYVVSEKTIFESESFSARLA 261 Query: 248 QGMLTDLL 255 Q + D L Sbjct: 262 QLAMLDCL 269 >UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=Q2G836_NOVAD Length = 296 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 4/233 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RIR ++++ K+A Y++ P +S LA S+ SV+ F + +G Sbjct: 19 NALTRIRSALPQMSKTAAKIAAYVVEHPADVVGMSITDLAALVDASEGSVINFCRSIGLG 78 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH + +D V K+ A+ +L+V + Sbjct: 79 GFQHLKLSLAQEIVQ----PVHFIHEDLEREDSTETVCRKVFHSGIQALRDSLSVLDPKA 134 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++R+ARR+ + GIG+S +A++ ++L++IG +A V D H + D Sbjct: 135 MAAAVDIIRAARRVEIYGIGSSAPIAEDAHYRLLRIGLDARVVIDSHVQAISASRCDKDV 194 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 +L IS++G E A G + + IT F + +Q A L+T+A E Sbjct: 195 AVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYADVVLFTMARE 247 >UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulator ybbH n=7 Tax=Bacillaceae RepID=YBBH_BACSU Length = 283 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/281 (27%), Positives = 138/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 GL I+ L S++KLADY+L P A + +++ A S ++V++ + LG K Sbjct: 4 GGLAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ LA P+ + I +PL + EK A+ T ++ ++ Sbjct: 64 GFQDLKMRVAGDLAK----PTFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYKE 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V++L A + G+GASG+VA++ K ++I A A D H + + + + DD Sbjct: 120 LERAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKDD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSA 240 ++ AIS++G +E+ G +++T F+ ++ A LYT +A SA Sbjct: 180 IVFAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ + D+LF+ + + E I + A ++ + Sbjct: 240 ATSSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAAIQSM 280 >UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=Pediococcus RepID=Q03HR4_PEDPA Length = 270 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 134/264 (50%), Gaps = 14/264 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + Q+Y L++ ++K+A ++ P + ++ L+ +A VS ++V +F +K+GY Sbjct: 1 MNIIDVVEQKYPSLSRQERKIALKVVQHPADVKKMNINTLSKKAEVSTATVTRFVKKMGY 60 Query: 61 KGFPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F KL L+EA ++ E+ + P+ +Q+ + + +N + Sbjct: 61 PDFSQFKLGLAEATSNITENVDNAPLPDQVTD----------FYNQMITGTWKRIN---Q 107 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L++ ++++A R+ + G+G+SG AQ + +LM++G NA A D H + + Sbjct: 108 KTLNQVAMLIKNAPRVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISSSIMQK 167 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDLL+ +S +G E+N A + KV++IT F + L + + + L E N+ Sbjct: 168 DDLLIVLSVSGKSNEVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQLSVQYSEFVDNT 227 Query: 240 ASISACHAQGMLTDLLFIALIQQD 263 I++ + D+L L+Q + Sbjct: 228 QFINSQLGVVYIIDILSTMLLQNE 251 >UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=A1AYM0_PARDP Length = 287 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 132/262 (50%), Gaps = 4/262 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +IR + L + ++ D + + D + +Q++ +AGVS + VVK A+KLG+ GF Sbjct: 13 QIRMKLPFLTPLEARVVDTITGRNDLDLTTALRQVSEDAGVSDAMVVKIAKKLGFNGFRD 72 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + EAL ++ +H++I +D + K+ + + A+ T+++ Sbjct: 73 FR----EALVVYRQTDVASLHSEISPEDSSADIIRKVFQTSIQALEETMSIIDVSAFDRA 128 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 T+L AR+ G+G S +A++ A K ++IG A D H +L + P+D+++A Sbjct: 129 ATLLHGARQRDFYGVGGSAQIARDVAHKFLRIGLRAGVQDDPHMMLMSAALLGPEDVVVA 188 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S++G + AA + G +V+AIT + L + A L + A+ + +A Sbjct: 189 FSHSGTTSNVIEAARLARQQGARVIAITNYATAPLSELADIALCSTAQGSPLLGENAAAR 248 Query: 246 HAQGMLTDLLFIALIQQDLELA 267 AQ + D +F+A+ Q+DLE A Sbjct: 249 IAQLNIMDAIFVAVAQRDLERA 270 >UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C7T7Y4_LACRG Length = 315 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/282 (26%), Positives = 140/282 (49%), Gaps = 4/282 (1%) Query: 1 MNGLL-RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M LL +++ + L+ ++ LADY+L + ++ Q+A +GVS +SV++F + Sbjct: 1 MKALLAKVQAQLPQLSPVNRALADYVLTDAEAFIAQTTAQIARASGVSAASVIRFVRLFD 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y + KLAL + +P P+ ++ DD L + KL + AA+ + + Sbjct: 61 YPDLQSFKLALVRDTQAPALTPLDPL---VQDDDDLPTMMRKLSQTAIAAVRDLPDELDQ 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +T LR AR I L G+ AS LVAQ+ KL++ G+ A D H L V ++ Sbjct: 118 AAVQTAITTLRHARHIYLVGMSASALVAQDLYLKLIRAGYLAIFDADAHTALERVYYTTA 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++ SY+G+ +E+ LAA + R V+ +T P+ L+ AS + E Sbjct: 178 ADAVVVFSYSGLTKEVVLAAQQARRNQTPVIVVTRAEPSPLRDAASCVIALPPTEPLLRI 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ + + ++LF+ ++ +++ + R + L +L Sbjct: 238 GAVTSMFTETYVANILFLGVVHGEIKQTEQNYRATSQLTGEL 279 >UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n=22 Tax=Gammaproteobacteria RepID=A4TMJ1_YERPP Length = 292 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 2/251 (0%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L +S +++A Y+L QP LS L+ ++++++F + LGYKGF K+ L+ Sbjct: 24 LTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYKGFQDFKMDLAIE 83 Query: 74 LASQPESPSVPIHNQIR-GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 +A++ S + + ++ GDD L +G KL + TLN+ S E + + V +LR A Sbjct: 84 VATRHNSENSLLDADVQEGDDTLA-IGSKLQSAINNVLSETLNLLSIESVEQVVKVLRPA 142 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 RI + G+G+SG+ A++ KLM+IG A + H + +P D+ + IS++G Sbjct: 143 DRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMNPGDVAIGISHSGTS 202 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 E A G +A+T + + + A + L + SI AQ + Sbjct: 203 AETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQGDSIGTKIAQLFVL 262 Query: 253 DLLFIALIQQD 263 DL++ L++ D Sbjct: 263 DLIYALLVKAD 273 >UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=Clostridium RepID=A6LUR0_CLOB8 Length = 281 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 140/282 (49%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y +K +ADYL+ + +S++ +A S +VV+FA+K+G+ Sbjct: 1 MNVLQYIKQNYDSFTDREKLIADYLIETKERIISMSARDIAEATKTSAPTVVRFAKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 LKL LS ++ + E+ ++ + D + + + + + M T+++ EE Sbjct: 61 NTLNELKLKLSINISKEEEAGAIQFQ-YLDNDLGTKNIIYGIKQSVDSIMEQTVSLLDEE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +L SA+ I + +G SGLV Q+F +KL ++ D H + + Sbjct: 120 CLDKAIELLISAKNIYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTHLQITSSVLLEEG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNS 239 D+ LAISY+G +E+ V+AIT + N S + I A E++ Sbjct: 180 DVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKSIRE 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q + D+L+I +I+ +++ E++ + VK+L Sbjct: 240 GAISSRISQLAIIDMLYIGMIRNNIKEVEEKLISTRKAVKEL 281 >UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor) n=2 Tax=Bacillus RepID=Q9K6Z8_BACHD Length = 284 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 133/259 (51%), Gaps = 2/259 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +I Q ++ K+A+Y+L P+ ++++QLA +A SQSS+V+F ++LG + F Sbjct: 7 LAKIEQELASFPAAETKVANYVLKHPELVPTMTTKQLAEQANASQSSIVRFCKRLGLESF 66 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 P LKLAL++ L + + + + DD ++ +K+ N A+ +E+ Sbjct: 67 PKLKLALAKELTRK--EAYINSASLLETDDSPPILFQKVSSLNQMALDMATKAMNEQAFT 124 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V + A++I G+G S + +K M++GF++ A D H ++ + D++ Sbjct: 125 EAVEQMVKAKKIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGDYHQMIPFITMMDEQDVV 184 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + +S +G +E+ AD K++ IT + +AL ++A+ L E SI+ Sbjct: 185 ICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDIEVQQRIGSIA 244 Query: 244 ACHAQGMLTDLLFIALIQQ 262 + +Q + D L++++ + Sbjct: 245 SRTSQLNVIDALYVSVFHR 263 >UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LA29_STAHJ Length = 283 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 143/280 (51%), Gaps = 3/280 (1%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+G L+ I L S++++A+Y+L PD + S Q+LA+ VS ++VV+ ++KL Sbjct: 1 MHGSLIIIESSLSDLNPSERRVAEYILEHPDEIINYSVQKLADLTNVSVATVVRLSKKLK 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF LKL ++ L ++P + + +I D + V + + NT + T + S Sbjct: 61 CKGFQDLKLKIAYDL-NEPGNIQRG-YAEIDKDYSIEEVTQTVFHNNTKTLRDTERILST 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + ++ ++R+ + GIGAS L+AQ+F KL +I + + S Sbjct: 119 ENIKHAFELIVNSRKTCIYGIGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSS 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++AIS +G +++ + G KV++IT + N + + L+ + E+A S Sbjct: 179 EDVVIAISSSGQTKDIVNSTQLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRS 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++S+ A + D+L+I + D +++ ++ +K Sbjct: 239 GAMSSRIAMLSIIDILYICIASNDYLSNRQKLENTRKAIK 278 >UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=Q1WQV4_LACS1 Length = 274 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 116/220 (52%), Gaps = 9/220 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I + L++ ++K+A +L P + ++ +LA +AGVS +++ +F +++ Sbjct: 1 MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+ + AS PE VP+ ++ D + G+K+ + + T + Sbjct: 61 SDFHDFKLKLAISAASSPE---VPVSSE---SDSM---GDKVYEFYQKVLQGTWKQLDTD 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +H V + ARR+ + G+G+SG AQ F +L+++G A D H + + D Sbjct: 112 TIHNIVHAITKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSD 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 D+++AIS +G ++N+A + G K+++ITGF + L Sbjct: 172 DVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPL 211 >UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C511 Length = 286 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 135/265 (50%), Gaps = 5/265 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +RI++ ++K +A+Y+L + D + S+Q L + S +++++F++K+G+ Sbjct: 9 MNAYIRIKEYNDSYTATEKLIAEYIL-ENDILQD-SAQALGEKTNTSAAAIIRFSKKIGF 66 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK+ L++ S E + +D + + EK + N + T + + + Sbjct: 67 KGFSDLKMNLAQ---STKEEKQQEVDLIFEPEDNISTLVEKGCRLNMNTVLKTYQLINID 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E + +L +A I L G+G S ++ + KLM+IG D+H + Q+ + Sbjct: 124 TLEESIDLLNNASTIYLFGVGGSSVIGLDIYQKLMRIGKKVIYNADLHVQMTFAQSMDQN 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G L A + V++IT N + + +++ L +EE+A Sbjct: 184 DAALIISYSGSTTGLVDVARVLHEKQIPVISITQINANPISKLSTYSLKVPSEEKALRIG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 ++S+ + ++TDLL+ + +++ E Sbjct: 244 AVSSRISSFVITDLLYYGVFKKNFE 268 >UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7K6_PAESJ Length = 284 Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 2/259 (0%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I Y ++KK ADY+L D ++S LA GV ++S+ +F + LG+KG+ Sbjct: 10 IHSHYNRFTATEKKTADYILEHADAVVYMSITDLAEGCGVGEASIFRFCKALGFKGYQQF 69 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+AL+ ++++ E P + Q++ D L K ++ N A+ T + + ++ + Sbjct: 70 KIALAHSISADNEIPQLS--GQVKIQDTLEDAVSKTLQSNINALNETFKLIQLDSINRAI 127 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L + R I G+G+S + A K M+I D H + D+ + I Sbjct: 128 DLLIRSDRFIFYGVGSSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMGERDVAIII 187 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 SY+G ++ A + G ++ IT F + L + L A E S+SA Sbjct: 188 SYSGSTKDSIEVAKKAKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQGGSLSAKI 247 Query: 247 AQGMLTDLLFIALIQQDLE 265 AQ L D+L++ ++ E Sbjct: 248 AQLYLLDVLYVEYFKRTYE 266 >UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG85_KOSOT Length = 275 Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 138/258 (53%), Gaps = 9/258 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 +++++ Y L++S++++A Y++ +PD H + +LA + S+++V + +KLG+ G+ Sbjct: 3 IVQLKGIYDSLSESERRVAKYIIERPDDVIHYTITELAKFSHSSEATVYRLVKKLGFSGY 62 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K++L+ L S+P G + + E++++EN + T+ V + L Sbjct: 63 QSFKISLAREL-------SIPQEVIEEGSEGSYQNFVERIVQENISLAKETMAVLDLDAL 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ +ARR++ G+G S +VAQ+ ++ +GF++ D HA + + +D+ Sbjct: 116 KKAVELIINARRLVFFGVGRSAVVAQSGSFNFALLGFSSTHYIDPHAQVMVASGLTNEDV 175 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS+TG R+ + G K + IT + + + LYT A + +T+ ++ Sbjct: 176 VVGISHTGTIRDTVKSVQVAHAAGAKTIVITSGINSPITEVGDVVLYTAAGKPSTSEFTV 235 Query: 243 SACHAQGMLTDLLFIALI 260 S + ++ D+L+ ++ Sbjct: 236 SRI-GEFLILDILYKTVV 252 >UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8RRF4_9CLOT Length = 289 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 139/271 (51%), Gaps = 1/271 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+RI++ + ++K + +L P+ A S +QLA++ S +++V+ +K+G+ G+ Sbjct: 5 LVRIQEYSAQASGAEKGVLRFLRENPEEAAGYSIKQLADKTFSSAATIVRLCRKMGFDGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 L+ +L A + ES P+ +I+ DD L + K+ +N ++ T + + L+ Sbjct: 65 KELQKSLLYESALRRESTR-PMEQEIKKDDSLEELVNKVTYKNIVSLDNTRKLVDLDILN 123 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 +CV +L ++ + L GIG+S LVA++ KL+++ D HA L + DL Sbjct: 124 QCVELLDRSQTVYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIRSCDLA 183 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 L +SY+G+ E+ A E V+ I+ F + L + A + L A E S ++S Sbjct: 184 LIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFRSGAMS 243 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + +Q + D+L+ A + + + E+ R + Sbjct: 244 SRISQLNMIDILYTAYVHKRYDECMEQFRKT 274 >UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8T9_9THEO Length = 282 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 4/254 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L I++ S+ K+A Y+L D LS +LA S++S+V+F + +G KGF Sbjct: 5 LTVIKELEATFKPSEAKIAKYILDNADVVTELSINELARACDTSEASIVRFCRTIGLKGF 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ ++ +L+ Q + + I DD + V +K+ N A+ T+++ + + Sbjct: 65 QELKIKIAVSLSKQTK----KLDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDVKSII 120 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + V L +A +I G+ ASG VA + K +I A +D H L + D+ Sbjct: 121 KAVDALSNANKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLKKGDVA 180 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 ISY+G RE+ A + G +++T F L + A L+ +EE S + + Sbjct: 181 FGISYSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRSGATA 240 Query: 244 ACHAQGMLTDLLFI 257 + AQ + D+LFI Sbjct: 241 SRIAQLTVIDILFI 254 >UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=Burkholderiaceae RepID=Q1LPJ6_RALME Length = 338 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 7/243 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI Y L S+++LADY+ + L+ +LA+ AGVSQ ++ +F LGY GF Sbjct: 4 RILAVYDSLRPSERRLADYVARHGASVIRLTMPELADRAGVSQPTIARFCAALGYDGFKE 63 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL ++ + +P V H + DD + K+ A + + N S +++ Sbjct: 64 FKLQFAQNVGGG--TPFV--HQDVEADDRPADIAGKVFDRTIATLMSVRNALSADQIEHG 119 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + +L ARRI G G SG+VA + K ++G A D H + P D+ + Sbjct: 120 IRLLAGARRIEFYGCGNSGIVALDIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGDVAVL 179 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA- 244 +S +G ++ AA G VLA+T + + L + A C+++ EE + +++ Sbjct: 180 VSNSGRTWDMLTAATLARSSGASVLALT-HSGSPLARLADVCVFSDVEEDSEVYTPMTSR 238 Query: 245 -CH 246 CH Sbjct: 239 ICH 241 >UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=Granulicatella RepID=D0BLW5_9LACT Length = 268 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 134/266 (50%), Gaps = 13/266 (4%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L +DKK+A+Y+ T S LAN GVS SS+ K+ +K+GY + K+ L++ Sbjct: 5 LTDTDKKIANYIEQNISTVLSSSIHDLANLIGVSSSSISKYIKKIGYASYSRFKVVLAQQ 64 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 A PI Q+ +D ++ + KL T + TL + ++E L V + SAR Sbjct: 65 NAQ-------PIDAQLDSNDTIKTIQSKLFHTITRSYEMTLELLNDELLETIVQQIHSAR 117 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 RI + G+GASG+V + +KL +IG N D H LA++ ++ D ++ ISY+ + Sbjct: 118 RIYMFGVGASGMVCNDLYFKLSRIGKNIIYHTDSHIQLASLSGATNQDFIIGISYSSNTK 177 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 E+ A + L+ITG L +++ L E S++I++ + L D Sbjct: 178 EVITAFKIAKELSIPTLSITGIGNQQLDSLSTYQLKIPRHENTIRSSAITSRNDSFFLID 237 Query: 254 LLFIALIQQDLELAPERIRHSEALVK 279 +L++AL+Q+ E RH + L K Sbjct: 238 ILYLALLQK------EEHRHFQNLEK 257 >UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=Bacillales RepID=C4KZ09_EXISA Length = 301 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 130/263 (49%), Gaps = 10/263 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +I + + +KK+ADY+L ++++++LA + VS++S+V+FA+ +G F Sbjct: 24 LTKIDLAKEDMTAVEKKIADYILSHSTLIPNMTTKELAQKTDVSEASIVRFARVVGIDSF 83 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 A KLAL + LA ++ N ++ D +K+I N AA+ A + +L Sbjct: 84 KAFKLALVKDLAVT--ETTLTDFNVLQQKDTPYDSFQKVIHVNKAAIEACAEAMDKRELE 141 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V + A R+I G+G S A + +K K+G+ A D H +L+ + D+ Sbjct: 142 HAVDLFARASRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPHLGKSDVF 201 Query: 184 LAISYTGVRRELNLAADEMLRVGGK----VLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +AIS +G +++ E++R K V+AIT + L + A L T E Sbjct: 202 VAISTSGRTKDVL----ELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPNVESDFRI 257 Query: 240 ASISACHAQGMLTDLLFIALIQQ 262 ASI++ Q + D L++ L+ + Sbjct: 258 ASIASRMTQLTIIDTLYMGLLHR 280 >UniRef50_B9K581 Transcriptional repressor of rpiB expression; transcriptional repressor of ribose catabolism (RpiR/YebK family) n=3 Tax=Proteobacteria RepID=B9K581_AGRVS Length = 291 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 13/269 (4%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR L + K+ D + D + S +Q+A AGVS++ VVK +KLG+ GF Sbjct: 14 RIRMMMPMLTPLEAKVVDTVFGMRDFSEETSLKQIAENAGVSEAMVVKITKKLGFSGFRD 73 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + ++S+ P+ +H ++ DD + +K+ + + A+ TL + + Sbjct: 74 FRSSVSQ----YNRQPTTEMHQELSVDDTSLEIVQKVFRTSIHALEETLAILDMAAFDQA 129 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 M+ AR G+G S +A++ A K ++IG A+ D H +L + + D+ + Sbjct: 130 ADMIHKARNRDFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDVAIG 189 Query: 186 ISYTG----VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 S++G V L LA + G +A+T + +AL Q A L + A+ + Sbjct: 190 FSHSGNTIAVIEALQLAR----KNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGEN 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPER 270 +A AQ + D +F+A+ Q+D + A ER Sbjct: 246 AAARIAQLNILDAIFVAVAQRDYQ-AAER 273 >UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM Length = 289 Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 123/264 (46%), Gaps = 7/264 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI L++S++KL +Y+L P +S+ L+ +S+ ++++F ++LG++G+ Sbjct: 7 LTRIESLMPFLSKSEQKLGNYILTHPKDVTDMSTSALSQACDISEPTLIRFTRRLGFQGY 66 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 KL LS S + S P+ ++ +D + KL ++ +TLN L Sbjct: 67 KDFKLHLSANFISN-QIDSTPV--KVNLNDSAIEIYRKLASFTINSLNSTLNTLDANDLE 123 Query: 124 ECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + A R+I L+G+GAS ++ F K+M++ D+H L Sbjct: 124 NATNYIYVAAKQNRKIFLSGMGASTVLIHEFQIKMMRLNIQTIFFEDIHLRLEACANLKK 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL + + G +E D K++ IT F + + ++A LYT E Sbjct: 184 NDLFICFTTLGASKENYELIDIAHERKAKIIVITQFGNSQIAEKADIALYTSIIENNLRL 243 Query: 240 ASISACHAQGMLTDLLFIALIQQD 263 AS ++ Q M+ D+LF+ + +D Sbjct: 244 ASQTSIILQSMVIDVLFLTIACKD 267 >UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9A2_9FIRM Length = 336 Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 22/266 (8%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I ++Y L +S KKLADY+ ++LS LA +GVS++++ +F +KLG Sbjct: 55 NILDLITEQYPTLTRSGKKLADYIFANTTETQYLSISALAENSGVSEATITRFCRKLGLS 114 Query: 62 GFPALKLAL--SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ KLA+ S+ + E P + I D L + +KL+ N ++ T ++ E Sbjct: 115 GYNDFKLAIAKSDHVTDMGEPSGSP--STITSQDSLPDIFQKLLSANILSLTETFDLLDE 172 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-----DMHALLATV 174 +++ V +L A + G G+S ++A AW F+ A+ R D H + ++ Sbjct: 173 KEISRAVDLLYGAHHVYCLGNGSSSVMAME-AWA----RFSTASTRFIHIADSHMQMLSI 227 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGK----VLAITGFTPNALQQRASHCLYT 230 ++P D++L SY+G R++ ++++ + K V+ +T F + A L Sbjct: 228 ALATPQDVILFFSYSGATRDM----EDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLC 283 Query: 231 IAEEQATNSASISACHAQGMLTDLLF 256 E S SI+A Q ++ D LF Sbjct: 284 GYNESPLQSGSIAARMGQMLIIDCLF 309 >UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C2H3_LISGR Length = 282 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 81/276 (29%), Positives = 129/276 (46%), Gaps = 14/276 (5%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI ++ L +S+KK+A+ +L P A S LA A S +++V+F + LG K F Sbjct: 7 LNRIETLFKDLPKSEKKVAEMVLQDPAFASASSIHSLAKRADTSAAAIVRFCKSLGLKSF 66 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN----SE 119 P K L L+ SP + D+ + +KL+ A + TLN SE Sbjct: 67 PDFKRQLYSELS----SPVASGYYDFEEDESFDGISQKLL----ANYFQTLNDTAGQISE 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 K+ L A I G+GAS LVAQ+ A K ++ G +D H +LA A+ Sbjct: 119 AKIRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGKQVVISQDEH-VLAMAFAARK 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATN 238 + A+S +G + A++ + V+ +T F P+ L+ +A L T A E Sbjct: 178 SGVFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSKLKAKADFLLETSRAPEAKFR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 S + S+ AQ + D+L+ + + + E+IR S Sbjct: 238 STATSSKQAQFFIIDVLYYHYVSRHYDQMIEQIRES 273 >UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBM1_9CLOT Length = 266 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 117/224 (52%), Gaps = 13/224 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++++Y + +K +ADY++ D ++++ LA E G S +++ +FA+K+G Sbjct: 1 MDILCEVQRKYNEFSDKEKDIADYIMQHGDKIKNINITDLAKEIGTSGATITRFAKKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +K+ L +++ E P I +D + + E + T + +E Sbjct: 61 DSFVDMKIKLG---SNKVELP-------INDEDGIFSYTYQYYNE---VIERTKMLIDKE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + V ++ A+ I + G+G+SGL + +L+++GFN + D H ++ S + Sbjct: 108 EIFKVVNEIKKAKNIYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIVSEN 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA 224 DL++ IS +G +E+ + + G K+++ITGF + + + + Sbjct: 168 DLVIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYS 211 >UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJX2_STACT Length = 288 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 11/267 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 ++ IR++ + L ++++ +A +LL P+ +S+Q L + S ++V++ A KLG+KGF Sbjct: 7 IIHIREQMKHLTKNEQHIAQFLLEHPEKVLEMSAQTLGDVTKTSSATVIRCAHKLGFKGF 66 Query: 64 PALKLALSEALASQPESPSVPIHN--QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LKL+LS L P HN +I D+ R + KL+ + T + ++ Sbjct: 67 VDLKLSLSRNL------PQHEAHNYKEIAQDESPREIKRKLLSRAAYTLETTEVLLEDQA 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L ++I++ G+GAS +VA++ K + G D H L + D Sbjct: 121 LEALVDKLYDVQKIVVFGVGASHIVAEDIYQKFTRAGMEVIQSADAHVLATVLAGYHKKD 180 Query: 182 --LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC-LYTIAEEQATN 238 L + +S +G +E A G V AIT + + L A L+ + E++ Sbjct: 181 NVLFIGVSNSGHNQETLRLAHVAHYYGATVAAITSRSDSKLAGEADIVLLHDASSEKSLR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLE 265 A+ S+ AQ M D+LF + +D + Sbjct: 241 LAATSSLIAQLMTVDILFYTYLSKDYQ 267 >UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus lactis RepID=Q02VU4_LACLS Length = 282 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 131/254 (51%), Gaps = 8/254 (3%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR Y L++SD+ ++DYL+ D+A LS Q+ A + VS +++ +F++K+G+ F Sbjct: 8 RIRSYYDNLSKSDQAISDYLIANIDSAAMLSIQEFAQKTQVSTATISRFSKKIGFNSFQE 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LKLA+ +++ + +++ D + + K N +++ +TLN+ S +L + Sbjct: 68 LKLAIHATDSTRDD----EFFSELSPTDDYKEILTKNFNGNISSLNSTLNLISNRQLDQT 123 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS--SPDDLL 183 + +L A G+G S VA K +++ + +D H +QA+ + +D Sbjct: 124 MEILLKANTCGFFGLGGSNAVALIAFHKFLRMPLHCVYHQDFH--FQQMQAAKLTSEDCA 181 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 IS+TG ++ + + G ++A+T F + L + A L +I+EE + +++ Sbjct: 182 FVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAADVALISISEEISFRPEAVA 241 Query: 244 ACHAQGMLTDLLFI 257 + +Q L D LF+ Sbjct: 242 STVSQISLLDALFM 255 >UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVK6_9LACO Length = 280 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 136/262 (51%), Gaps = 24/262 (9%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +++ + L + +KK+A L +P+ R ++ +LAN+AGV ++V +F +++G K F Sbjct: 3 QVQNLFINLPRQEKKVARVTLQKPELVRRMNITELANQAGVGVATVSRFTKRVGCKNFAD 62 Query: 66 LKLALSEALASQPESP---SVP--IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KLAL Q ES S P IHN +K++ E T AM +T + Sbjct: 63 FKLALVTPDTMQRESEQNVSTPNDIHNYY----------QKILAE-TMAMVST------K 105 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + ++ A+R+ + GIG+SG AQ FA +LM++G A A+ + + + + Sbjct: 106 QLRQAANLIHGAKRVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESNMMTIASATMQDN 165 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNS 239 D+++A+S +G E+ A + + G ++A+T F N+L + S L+ I + E + Sbjct: 166 DIVIALSVSGSTPEVCSAVRDSRKNGATIIAVTAF-KNSLLGKMSDLLFQIKSTELVGDY 224 Query: 240 ASISACHAQGMLTDLLFIALIQ 261 I++ A + D+L L+Q Sbjct: 225 DFINSQFAVTYVIDMLTQMLLQ 246 >UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=22 Tax=Enterococcus faecalis RepID=C2JLW7_ENTFA Length = 290 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 140/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L I+ R Q L +S++K+A+Y+L +T +++Q+LA +AG S +++++F + Sbjct: 12 NIVLSIQDRLQQLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSMDVN 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS L + ++ ++ + + +KL + + + Sbjct: 72 GFTELKLLLSANLGQMKQQ----MYTEVTKGESTADIKQKLQARFVHVVERSGQTLEDVA 127 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++E V +L I + G+GAS LVAQ+ K ++G D H + + ++ Sbjct: 128 VNEAVDLLEKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPS 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSA 240 + + IS +G +E + AD + G +++IT + + +++ L T + E+ SA Sbjct: 188 VFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQTSSGEDVPLRSA 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + AQ + D+LF A ++ + E+I+ S V++L Sbjct: 248 ATVSLVAQLYVVDVLFFAYAAKNYKETLEKIQISRKNVERL 288 >UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945F6 Length = 248 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 135/247 (54%), Gaps = 5/247 (2%) Query: 38 QQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRL 97 Q+LA A VS++++V+ ++ L KG+ LKL ++ LA S + +I D + Sbjct: 1 QRLAELAEVSEATIVRLSRSLNLKGYQELKLRIAADLAQSLNSNLAESYQEIHMDASSQS 60 Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 + E + N ++ T++V + ++L + +L AR+I L GIGAS ++AQ+F KL +I Sbjct: 61 LVESISHNNMRSIQDTMSVLNIKELDRAIEVLGGARKITLFGIGASAVIAQDFKQKLTRI 120 Query: 158 GFNAAAVRDMHALLATVQAS-SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 A D + AT+ A+ D +L ISY+G +++ LA G ++++T F Sbjct: 121 NRWCEAAYDFDS-QATLAANLQEKDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFG 179 Query: 217 PNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE---LAPERIRH 273 N + ++A L+T + E++ S ++++ AQ + D+L++ + +Q+ E LA E R Sbjct: 180 HNPVAEQAHIRLFTSSLEKSIRSGAMASRIAQLNVIDILYVGIARQNYEENILALENTRK 239 Query: 274 SEALVKK 280 + ++ + Sbjct: 240 AVKMMNR 246 >UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales RepID=C6JFM8_9FIRM Length = 285 Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 11/285 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L I ++Y L +S KKLADY+ ++LS LA VS++++ +F + LG G+ Sbjct: 6 LDSITEQYHSLTKSGKKLADYVFSHTTETQYLSITSLAENCKVSEATITRFCRGLGLSGY 65 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 A KLAL++A + S + +D + + K+ N ++ + + EE++ Sbjct: 66 NAFKLALAQADRTTDLGDSSNSAEPVSSEDSISTICAKVHAANLLSLNESYALYDEEEMS 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAW-KLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +++L S+RRI G G S ++A AW + N + D H + + + D Sbjct: 126 KAISILSSSRRIYCFGQGGSMIMAME-AWARFSTASPNFVHICDSHMQASAIAMADSKDA 184 Query: 183 LLAISYTGVRRELNLAADEMLRVGGK----VLAITGFTPNALQQRASHCLYTIAEEQATN 238 +L SY+G R++ + L++ V+ IT F +A + AS L E Sbjct: 185 ILFFSYSGSTRDMC----DTLQIASSRHVPVILITHFPKSAGAEFASVVLQCGYNESPLQ 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLE-LAPERIRHSEALVKKLV 282 S S++A Q L D LF Q + + R + A+ KL+ Sbjct: 241 SGSVAAKVGQLFLIDCLFYGYCSQKPDTCSAARSATAHAIANKLL 285 >UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK66_PROMI Length = 283 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 71/255 (27%), Positives = 131/255 (51%), Gaps = 16/255 (6%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 R QG ++++LA YLL D +++ +LA +AGVS +SV++F++++GY G+P K+ Sbjct: 12 RLQGKG-TEQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSRQMGYGGYPEFKID 70 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEK------LIKENTAAM-YATLNVNSEEKL 122 Q S + N + D +++ + I+++ A + AT+++ +E+ + Sbjct: 71 YLSEEKQQKSSSDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIALLDAATIDLLAEKMI 130 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 SA+RI+L G+GAS +VA + KL+++ N D+HA LA S DDL Sbjct: 131 --------SAKRIVLFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSANLSADDL 182 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +A++ G ++N + G +A+T F + + A++ L +EQ + I Sbjct: 183 AIAVTARGNTADINRMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQHSQLGVI 242 Query: 243 SACHAQGMLTDLLFI 257 + Q + D+LF Sbjct: 243 TPQVLQMVAFDVLFF 257 >UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=Lactobacillus rhamnosus RepID=C7TGD6_LACRL Length = 277 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 129/261 (49%), Gaps = 15/261 (5%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI Q Y L ++ +++ADY + S + L+++ GVS +++ +FA++LG+ F Sbjct: 7 RIAQVYSALGEASRQVADYFRHNYAKVANSSLRNLSDKIGVSTATISRFARQLGFASFDQ 66 Query: 66 LKLALSEALASQPESPSVPIHNQIRGD----DPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LKLAL + I N GD D K + N AA+ TL+ ++++ Sbjct: 67 LKLALLK-----------EIDNTTNGDVETNDNSLASARKTVNANIAALEGTLSFLTQDQ 115 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V +L A ++ L G+G+S ++A+ +++ A D H L + + D Sbjct: 116 IDHSVNLLLDANKVALFGLGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLTEHD 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG ++ D + ++A+T + + L +R S ++I+E+ S + Sbjct: 176 VAIVISHTGNDTDILALVDLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYRSDA 235 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 + + +Q + D+L+ L+++ Sbjct: 236 LISMTSQLAIFDVLYTELVRR 256 >UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EAC5_9ACTN Length = 283 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 2/259 (0%) Query: 17 SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALAS 76 +++ + Y+ P LS + LA+ S SS+++F ++LG+ G+ + L LA Sbjct: 19 AERNVIAYVSAHPHEVVGLSVRGLADVTFSSPSSILRFCKRLGFAGYKEFQRELIAELAL 78 Query: 77 QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRII 136 + V + + D R+VG K++K N + AT L C L+ AR + Sbjct: 79 LGDKKDVALEDISMDDSVERIVG-KVMKSNVRTIEATARTLDYTVLERCAARLKRARAVN 137 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 L GIGAS LVA + A KLM++ D H L + D+ +A SY+G+ +E+ Sbjct: 138 LFGIGASRLVAHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGLTQEVL 197 Query: 197 LAADEMLRVGGKVLAITGFTPNA-LQQRASHCLYTIAEEQATNSASISACHAQGMLTDLL 255 E R V+A+T ++ L A L A E S ++++ AQ M+ D L Sbjct: 198 DCTAEAQRHNCPVVAVTKVDGSSKLATMADAVLGVAASEPLVRSGAMASRMAQLMVVDAL 257 Query: 256 FIALIQQDLELAPERIRHS 274 + A + D E A I+ + Sbjct: 258 YAAYVASDYERATHVIKQN 276 >UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio RepID=C9Q9L7_9VIBR Length = 281 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 132/262 (50%), Gaps = 34/262 (12%) Query: 16 QSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS---- 71 Q+++KL+ ++ + LS+ ++ G+S SSV+++A+ LG GFP LKL L+ Sbjct: 17 QNEQKLSQLIVERQFDLSELSATKVGALLGISDSSVIRYAKSLGCSGFPDLKLKLAAQAP 76 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + +A +S I GD +++ EK + + ++ + E + +C L Sbjct: 77 QVMARTAQSVYASIET---GDSTAQII-EKAKHLFVSTIEQSIGLMDAESVEQCAQQLLK 132 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS--SPDDLLLAISYT 189 A +I L GIGAS +VA + KL++ GFN +D H + VQAS DD+LL +S Sbjct: 133 ANKIALAGIGASAIVAADINHKLIRAGFNVQFNQDYH--IQIVQASLLKADDVLLVVSAR 190 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSASISACHAQ 248 G +E+ A + + G +V+A+T + + + Q A + + Y+ EE H+Q Sbjct: 191 GNTQEVLTAIERAQQNGAQVIALTRYGRDKVAQLADYVIPYSYTEE-----------HSQ 239 Query: 249 -GMLT---------DLLFIALI 260 GM+T D++F LI Sbjct: 240 LGMVTPQLLQMAAFDIVFFKLI 261 >UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus RepID=C2KAY2_9LACO Length = 281 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 128/246 (52%), Gaps = 9/246 (3%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I Y L ++ K +AD +P + + Q+L S +SVV+F + LG+KGF Sbjct: 7 KISDVYPNLNKTSKLIADVYFKEPRIFLNKNLQELGTITQTSGASVVRFCRNLGFKGFKD 66 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL---IKENTAAMYATLNVNSEEKL 122 ++A ++ + ++ ++ I N D+P ++ KL + +N A + T++ + L Sbjct: 67 FQIACAQEMPNKQDAMVDTIIN--TNDEPTSVL-YKLQLSLGKNIADIGKTID---HKSL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V ++RSA++I + G GASGL AQ+ +KL++ G N V+ H L V + +D+ Sbjct: 121 DAAVDLMRSAQQIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKEDI 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ SY+G+ +E L A + + K++A+T + L+ A + + E+ +I Sbjct: 181 LIVFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYGAI 240 Query: 243 SACHAQ 248 ++ A+ Sbjct: 241 NSLFAE 246 >UniRef50_B9DLT1 Truncated putative RpiR family transcriptional regulator (Fragment 1) n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DLT1_STACT Length = 190 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L ++ +Y L +S+KK+ADY+L +P +++ LA+ S SSVV+F K+ Sbjct: 3 NILYKLESKYPSLTKSEKKIADYILRRPQQIVDMTTHTLADRTSTSPSSVVRFGYKITDG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK +S+ ++++ + P +++ ++ L + K++ T + + E Sbjct: 63 GFQELKTEVSKYMSARTK----PRQLELQSNESLDTIKRKMLSRTTQTLCKVSDAVDEND 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L+ +R + + G GAS + A++ KL ++G N + +H L+ + D Sbjct: 119 IDKVCARLKQSRTVFIFGFGASYVAARDLFQKLSRVGINVHCIEGVHTLINVIATHDARD 178 Query: 182 LLLAISYTG 190 L IS +G Sbjct: 179 CLFIISNSG 187 >UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X148_ENTFA Length = 295 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 136/274 (49%), Gaps = 11/274 (4%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR + L+ ++KK++DY + ++ + LANE GVSQSSV +F +K+GY GF Sbjct: 9 RIRIKKPNLSLTEKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKKIGYSGFQE 68 Query: 66 LKLALSEALASQPESPSVPIHNQIRG------DDPLRLVGEKLIKENTAAMYATLNVNSE 119 K+ ++ QP +V N + G DD + +K+++ N ++ ++ Sbjct: 69 FKIDIARNSNYQPTFQNV---NSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTK 125 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + ++ SA+ + G G S +VA + K ++ + + D H L+ V + Sbjct: 126 ELLDNVLALMYSAKTLHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTS 185 Query: 180 DDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D + S++G +E +NLA ++ + K++ +TG + + L + + + EE Sbjct: 186 EDCVFIFSHSGKTKESINLAR-QVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEEGLFR 244 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + S+++ + + D+L+ + + + + ++ Sbjct: 245 AESLASRISYLTVMDILYTNTMYHNFDQNADSLK 278 >UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=16 Tax=Enterococcus RepID=C2H8J8_ENTFC Length = 286 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 141/278 (50%), Gaps = 5/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI + + ++KKLA+Y++ + +++ +LA +G+S +VV+F++K+G+ Sbjct: 5 MSVISRIESMMEDYSSAEKKLANYIIGNIEKVPTMTANELAEASGLSAPTVVRFSKKIGF 64 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + K+ +S L + + + I ++ + KL A+ T+++ EE Sbjct: 65 QSLTDFKITISTELQTGIDEG----FSDIEANESFYSIKNKLGNNAQVAIKETVDILEEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V L +A + L G+GAS LV ++ K ++G +D+H LL + ++ Sbjct: 121 TIQKVVECLETAESVFLYGVGASSLVVEDILQKWSRVGKPIIFEKDIHVLLPQLVSNEKK 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-S 239 +L +S +G ++ A+ + +++A+T F N L + A + T ++ TN S Sbjct: 181 KVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVLVQTSRPKEITNRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A+ ++ AQ D++F + ++ L+ + + EA+ Sbjct: 241 AATNSLLAQFATIDIIFYFYMAKNESLSEKVKKTREAI 278 >UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRD4_9DEIN Length = 264 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 9/240 (3%) Query: 19 KKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQP 78 +++A Y+L D + + ++A+ AG S++SVV+F + LG++GF KLAL+ L + P Sbjct: 6 ERIAQYVLHNADQVIYQTVIEVADAAGSSEASVVRFCRDLGFQGFQDFKLALASDLVTSP 65 Query: 79 ESPSVPIHNQIRGDDPLRLVGEKLIKENTA--AMYATLNVNSEEKLHECVTMLRSARRII 136 V + Q + P NTA + T + + + L E V + ARRI Sbjct: 66 ----VILPKQ---EKPTSAQSTADYVYNTARQVLDETRRLMNVDLLEEVVERILKARRID 118 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 G+G +G AQ+FA KL ++G A A D H+ + P DL IS +G + Sbjct: 119 FYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSGSSIDTV 178 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 A ++ G +A+T + + + A L T A E S+ A +Q ML D LF Sbjct: 179 KALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPESPLTRGSMGAKISQLMLLDFLF 238 >UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=Deinococcus RepID=Q1J2N3_DEIGD Length = 290 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 23/261 (8%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALAS--- 76 ++ D +L+ P+ L+ +L+ AG S ++VV+ Q LG+ G+ KL LS ALA Sbjct: 28 RVIDQILMDPERFLSLTIAELSEAAGTSDATVVRLVQHLGFGGYQEFKLQLSRALAVSRK 87 Query: 77 -----QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 +P+ SV I LR K+ + A+ TL + E V + Sbjct: 88 ADLTVEPQDASVTI---------LR----KIFDSSNTALDDTLEHLNLEAFSAAVQAMTL 134 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 AR I L G+GASG+VA + ++ +++G + A D L+T P D+L+A+S++G Sbjct: 135 ARHIELIGMGASGVVALSGQYRGLRLGLSCRASTDPGTFLSTCSLLEPTDVLIAVSFSGT 194 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 R ++ AA + G V+A+TG L + H L A ++ Q + Sbjct: 195 RPQVVQAARLARQAGAIVVALTGLGRTPLSKVVHHTLTVSAPGDRYRPEGLATQIPQVAI 254 Query: 252 TDLLFIAL-IQQDLELAPERI 271 D LF +L + QD L+ ER+ Sbjct: 255 LDALFTSLHVAQDPYLS-ERL 274 >UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A459_ENTGA Length = 268 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 126/248 (50%), Gaps = 10/248 (4%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L+ +D KLADY++ D ++S LA + S ++V++F++KLG+ F KLAL++ Sbjct: 14 LSTTDLKLADYIVENLDEIPTMTSNVLAVHSNTSPAAVIRFSKKLGFSKFSDFKLALTKD 73 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + ++ + ++ I+ DD + K+++ N + AT + E+ + + V + A+ Sbjct: 74 IENRIYNE----YSDIQNDDSFQTAKNKILRNNKMIIDATDPILDEQTVQQVVDKMFHAK 129 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 RI + G+G S L A++ K +IG +D + L ++ D L IS++G R Sbjct: 130 RIYVYGVGTSVLAAEDIRQKWTRIGKTVIFDKDRYLLTQQMKNDGADSLFWGISHSGKNR 189 Query: 194 ELNLAADEMLR-VGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS-ACHA---Q 248 ++ L+ E+ + +G L ++ N L ++ ++T E N S A H+ Q Sbjct: 190 DV-LSLVEIAKSLGMPTLGMSQLGQNQLTKKVDTPIHTARTEDIKNGHYGSGATHSIILQ 248 Query: 249 GMLTDLLF 256 + DLLF Sbjct: 249 IVTIDLLF 256 >UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9G3_9ACTN Length = 285 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 124/256 (48%), Gaps = 6/256 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I+ A+ ++ +A ++L +++ +LA++ GV+ S++ KFAQK+GYKGF Sbjct: 9 KIKSLLPSCAEKEQAIAQFILQHVRETSYMTIHELADKLGVADSTIFKFAQKMGYKGFRD 68 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + L ++ P V +H I D L + + + +++ TL + +E+ L Sbjct: 69 FR----NDLLTEAYDPEVSVHEHITTRDSLATIAATIFHSSVTSLHNTLALLNEDNLKRA 124 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 ++++ +A + G G S +VA + K ++ + D H + D+ + Sbjct: 125 LSLINNAHTLTFFGCGGSNIVAADAYHKFLRSPLHCQNAIDEHIQIMQASLLGAQDVAII 184 Query: 186 ISYTGVRRELNLAADEMLRVGG-KVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS++G+ R L E+LR ++ IT + + + A + +EE S S+++ Sbjct: 185 ISHSGLSRT-TLQIAEILRENRVPIIFITSYLNTPITRFADVVFISASEETGYRSESLAS 243 Query: 245 CHAQGMLTDLLFIALI 260 AQ ++ D LF A++ Sbjct: 244 RVAQLVILDTLFCAVM 259 >UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=Streptomyces RepID=B5HLI6_9ACTO Length = 317 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 11/268 (4%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 ++R + +S ++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 38 KVRTLGPSMTRSMHRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYRD 97 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L+LAL+ A Q + I I DDP+ V KL + + T +L Sbjct: 98 LRLALAGLAAQQQSGRAPAITTDIAVDDPIADVVAKLAYDEQQTLADTAAGLDTAQLGAA 157 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDDLLL 184 V SARRI + G+GASGLVAQ+ KL++IG A A D H A+ VQ S D+ + Sbjct: 158 VAATASARRIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRS-GDVAI 216 Query: 185 AISYTGVRRELNLAADEMLRV----GGKVLAITGFTPNALQQRASHCLYT-IAEEQATNS 239 AI+++G ++ E LRV G +AITG A+ Q A H L T A E Sbjct: 217 AITHSGATGDVI----EPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESELRP 272 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELA 267 A++S+ +Q ++ D LF+ + Q+ E A Sbjct: 273 AAMSSRTSQLLVVDCLFVGVAQRTYETA 300 >UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteriaceae RepID=A4WDW6_ENT38 Length = 274 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 12/262 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+RQ G + + +KL ++L P +L+ +LA E+ S++SV + + LG K Sbjct: 6 NLLLRLRQGVSGYSPTQQKLGSFVLNDPSRVLYLTITELARESDTSEASVTRLCRTLGCK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL AL Q E VP+ +GD+ +++++E+ A+ T + E Sbjct: 66 GYTEFKMAL--ALDVQREH--VPLK---KGDEI-----DEIVEESILALQDTSRLLDREI 113 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +R + + G+ AS ++ +KL+++G A DMH + DD Sbjct: 114 LLKAAQALHQSRSVYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLTSDD 173 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G R+L + G VLA++ + L + L E ++ + Sbjct: 174 LVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAKPEGPLSAGA 233 Query: 242 ISACHAQGMLTDLLFIALIQQD 263 ++A +L +LL +I D Sbjct: 234 LNAKVGVMLLVELLATTMISLD 255 >UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocaceae RepID=Q03YQ8_LEUMM Length = 284 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 2/255 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + ++R + + +++KL D+++ AR + Q+++ +GVS +++ +F +K+G + Sbjct: 4 NIIAQLRAQRKQYNTTEQKLIDFIINHVSEAREANIQEMSELSGVSTATISRFVKKIGLE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++L+ A A+Q + SV + +I D V +K+ A+ AT++ + + Sbjct: 64 SFREFSVSLASA-ATQM-AASVDLFGEIADTDDTIAVAQKVFGGAENALAATVSNLTATQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E L SARR+ GIG S +VA N K ++ + A D L + +D Sbjct: 122 LDEATLALISARRVGFFGIGGSSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLNSND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G ++ L A ++ K++A+T F + L + A L ++AEE S S Sbjct: 182 TAVVISHSGRNKDTLLIAKKLHEQHVKIIAVTSFKDSPLAKLADLVLLSLAEEVNFRSES 241 Query: 242 ISACHAQGMLTDLLF 256 +S+ AQ + D LF Sbjct: 242 MSSLIAQLTIIDTLF 256 >UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPL3_9FUSO Length = 285 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/282 (22%), Positives = 132/282 (46%), Gaps = 7/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ Y L++ +K +ADY+L + + +L+ LA GV S++ F +KLG+K Sbjct: 5 NMKFTIKTIYNDLSKKEKLIADYILKNINKSTNLTIADLAENIGVVNSTIFSFTKKLGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + ++L + ++ +H +I +D + + EK+ N ++ T + ++ Sbjct: 65 GFREFR----DSLLRDQFNSNINVHEKISKNDSITSIIEKVFNSNIKSLEDTKKIAEKKS 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + G+G S ++A + K ++ D H L + +D Sbjct: 121 FSTALKILTQVDIVHFFGVGGSSVIAHDAYHKFLRSPLKCRFDSDFHLQLMQASLLTKND 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS++G+ +E AD K++ +T + + L ++A + AEE S + Sbjct: 181 CAFIISHSGMTKESIEIADIAKERKAKIIVLTSYPLSILAKKADITFISTAEEIEYRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQD---LELAPERIRHSEALVKK 280 +S+ AQ + D +FI ++ + +++ +IR + A K+ Sbjct: 241 LSSRIAQLSILDTIFILVMLNNPTKTQISLNKIRTTIAKTKR 282 >UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillaceae RepID=Q03CI3_LACC3 Length = 280 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 6/270 (2%) Query: 1 MNGLLRIRQRYQ-GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ L Q Y+ L+ +KKLA YL PD A + +L+ GVS +++ +FA+ LG Sbjct: 1 MHDFLVQLQIYKPNLSGQEKKLAAYLQAHPDHASQANISELSQLTGVSTATISRFAKALG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y F AL++AL++ + PE + ++ D + + +K+ N A+ TL Sbjct: 61 YTNFQALRMALAQ---TSPEDDHA-LFAELSPKDSVDTLAQKIFTSNIDALRTTLANLDT 116 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + V + A + L G+GAS LVA + K ++ A D H L P Sbjct: 117 DALTKAVKWITHAEHLGLFGLGASNLVALDGYHKFLRTAIPVAYAADYHMQLMAATHLGP 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++ S++G ++ A+ + ++ ITG + L + A +AEE + Sbjct: 177 RDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMADAAFVAVAEESRYRT 236 Query: 240 ASISACHAQGMLTDLLF-IALIQQDLELAP 268 ++ A A+ + D LF I+ I+ D + AP Sbjct: 237 EALHALIAEISIMDTLFMISAIKTDSQTAP 266 >UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BCAC Length = 283 Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 76/281 (27%), Positives = 139/281 (49%), Gaps = 24/281 (8%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 L++R+ L+ +K++A+Y++ + +S Q LA E VS +++++ KLGY+GF Sbjct: 4 LKLREARDSLSTKEKQVAEYIIANKKNMQSMSIQSLAQENKVSTTTILRLCHKLGYQGFS 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEK---LIKENTAAMYATLNVNSEEK 121 LK+ L ++ +S + I +D + V K + K + A +N+N+ + Sbjct: 64 DLKIDLISSI--NHKSYGTLLQEDIDINDSMETVNHKVGLIEKSSIEETCALVNLNAFKL 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +E ++ +++I++ G G+SGLVA+ F ++L+KI + D + V +D Sbjct: 122 ANE---LISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLDQND 178 Query: 182 LLLAISYTGVRRE----LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 L++ IS++G E L LA + L+V +AIT +++ A L+TI+ E + Sbjct: 179 LVIVISHSGENHECIKLLTLARE--LKVP--TIAITKMGQSSVSSLAETVLHTISTEHVS 234 Query: 238 N----SASISACHAQGMLTDLLFIA----LIQQDLELAPER 270 + IS ML LFI IQ+ + ER Sbjct: 235 RLIPIRSKISQLTVINMLITNLFIKQYDERIQKQISTRAER 275 >UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MLD6_SALAR Length = 293 Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 1/251 (0%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L ++D K+A Y+L QP ++LA E GVS++++V+F +K+GY G LK L Sbjct: 19 LGETDAKIAGYILQQPGLVVQFPVKKLAQEIGVSEATIVRFCKKVGYGGLLNLKADLKRE 78 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L ++ + S+P I DD V +K+ + T+ + + + V SAR Sbjct: 79 LLAENDL-SLPSSPDIFLDDSRNDVAQKIALTIETSARETIGLLDMKIVKPVVERFLSAR 137 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 R++ G GASGL A K+ ++G ++ A D + + DDL++A S++G Sbjct: 138 RVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLKRDDLVVAFSHSGETP 197 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 E+ A + G LAIT + L + A+ T E SIS +Q + + Sbjct: 198 EVVNAFRLAQKKGAYTLAITHSPHSPLNELANTFWLTSGEAGPMQGDSISTRISQLFIIE 257 Query: 254 LLFIALIQQDL 264 L + + +L Sbjct: 258 FLCTEITRHNL 268 >UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=Ralstonia RepID=B2UK47_RALPJ Length = 280 Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 12/211 (5%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR L+ +++++AD++L QP T L +A EAGVSQ +V++F + +G G Sbjct: 20 RIRAARPSLSPAERQVADWVLRQPGTVLSLPVAAIAREAGVSQPTVIRFCRSMGCHGLSD 79 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLV---GEKLIKENTAAMYATLNVNSEEKL 122 KL L++ A+ H++ RG V G +++++ A+ A + L Sbjct: 80 FKLRLAQGNAA---------HDKPRGAAAPSNVPRSGTRVLQDTIDALAAMRDRFDPLAL 130 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V ++ +A RI L G G+SG+VA++ K + G A A D + + ++ D+ Sbjct: 131 DAAVALVDTAHRIDLYGFGSSGVVARDAQTKFFRYGIPANAYSDPYLVSMSLNVLQAGDV 190 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 ++AIS +G EL A + + +G V+A+T Sbjct: 191 VIAISKSGALPELQTAVERVRELGVHVIAVT 221 >UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C5BVH6_BEUC1 Length = 299 Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 1/245 (0%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L S++++A+ +L P + +QLA G S++SV +F + +G G+ L+LAL+ Sbjct: 27 LRSSERRIAEAILDDPQAVSRDTIEQLAARCGTSKTSVTRFCRTIGLAGYTELRLALAGD 86 Query: 74 LASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + ES + + +P +V ++L+ N A+ T+ L V L SA Sbjct: 87 VGRRRDESWRAELGSSADPQNPADVVVDELLTANVRALTETVRTLDRAALAASVDALASA 146 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 RI L GIG SG VA + + +IG A A + H L D+ +A+S+TG Sbjct: 147 GRIDLYGIGGSGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGASDVAIALSHTGET 206 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 E+ A G +A+T + +A+ A L T A E+ + ++ HAQ + Sbjct: 207 SEVAAALALARDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARADGLAGRHAQMFVV 266 Query: 253 DLLFI 257 D L++ Sbjct: 267 DCLYV 271 >UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_LISW6 Length = 283 Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 5/270 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI L S+KK+ +L P+ S +LA +A S ++VV+F + +G + FP Sbjct: 9 RIEGILHDLPTSEKKIGQTVLANPEFTTTASIHKLAQKADASGAAVVRFCKSIGLQSFPE 68 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK LS LA QP+ + I ++ + +KL+ M T + E K+ Sbjct: 69 LKRQLSLDLA-QPQKIG---YYDIEPNEDFHTITDKLVSNMMQTMNDTASQLDETKVLTA 124 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +L A I G+GAS LVA++ + K ++ G + A +D H L + +A Sbjct: 125 CDLLGDADTIYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGKRKSVFIA 184 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASISA 244 IS +G E+ D+ V+++T F N L+++A L T A E S + S+ Sbjct: 185 ISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEIRSTATSS 244 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHS 274 AQ ++ D+LF + ++I+ S Sbjct: 245 RQAQLLVVDILFYYYASHHYDEMIQQIKQS 274 >UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales RepID=D1PSB4_9FIRM Length = 282 Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 23/286 (8%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R RY L +S +++ADYL + A++LS LA E GV+++++ +F + LG+ G+ + Sbjct: 10 LRSRYSELTRSGRRVADYLTRHAEEAQYLSISSLAAECGVAEATIFRFCRSLGFDGYNEM 69 Query: 67 KLALSEALASQPESPSVPIHNQIR-GDDPLRLV--GEKLIKENTAAMYATLNVNSEEKLH 123 K++L++A A P+ +++ G D L + E A+ T +V + E + Sbjct: 70 KISLAQANA----IPTAAGADKLEPGADTATLCTHASAVALE---AINGTRSVLNPEAID 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS--SPDD 181 T+L+ AR++ G G S ++A + + + D H + T+ AS P+D Sbjct: 123 AAATLLQRARQVFCFGQGGSQILANDIWARFATVSTKFRTAGDSH--MQTIAASLMVPED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRV----GGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 ++L ISY+G R++ E LR+ G KV+ +T + A L A+E Sbjct: 181 VVLFISYSGSTRDMM----ETLRIVKGNGAKVILLTHYADAPGTALADVVLLCGAKESPL 236 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKKLV 282 + SI+A A + ++L + + ELA R R S+AL KL+ Sbjct: 237 DGGSIAAKIAVLFVAEVLVLRFTLDNQELAAIARERTSKALAPKLL 282 >UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enterococcus RepID=C0X1P6_ENTFA Length = 285 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 129/257 (50%), Gaps = 16/257 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + I + Y L +S++K+AD++L ++ + + + +A V +++++F QKLG+ Sbjct: 14 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF 73 Query: 61 KGFPALKLALS-EALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GF LK+ ++ E + + E PS H++ V + LI+ + +T + + Sbjct: 74 SGFSDLKIEIAKEDFSKKKEQPSSGKYHDE---------VAKSLIE----VLQSTSCLIN 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 EEKL + + ++ A + + G+G+SG + + +++G A AV D H + Sbjct: 121 EEKLTKAIQLINQASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DL++ S +G ++ + G K+LAIT + + + + A L T A E+ N Sbjct: 181 DRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQT-AIEEFLN 239 Query: 239 SASISACHAQGMLTDLL 255 S++ +Q + DLL Sbjct: 240 GGSLAGKISQLYICDLL 256 >UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGH5_VIBHA Length = 296 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 4/229 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR R L ++++ +A+ L + S +++A GVS + +VK ++KLG+ GF L Sbjct: 24 IRMRMPSLTRTEQSIAENFLKPHFMQKSTSIKEVAERLGVSTALIVKVSKKLGFSGFKQL 83 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K AL+ S +PS Q++ DD + K+++ + A+ LN + Sbjct: 84 KDALNAHHHSDSYAPS----EQLQPDDSCEQIVTKVLQNSINALTEILNFVDANMVSAAA 139 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + +AR I L G S ++ ++F KL++ G A+ RD H +L + S D++L + Sbjct: 140 EAIINARNIELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLSEKDVVLVV 199 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 S++G +L A + G +++IT L Q + + LY A + Sbjct: 200 SHSGQTVDLMDAVRLAKQSGATIISITNNFHAELSQLSDYPLYAPASPE 248 >UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q03CT7_LACC3 Length = 289 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 134/280 (47%), Gaps = 9/280 (3%) Query: 5 LRIRQRYQG----LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 + ++ YQ L++++KK+ DY++ +S LA AG S +SV + A++L + Sbjct: 1 MSVKGNYQSTRSELSETEKKIVDYVMAHSQAVLTMSVHDLAKAAGTSPASVSRAARRLQF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK+ L+ L +I+ + L + +KL+ + ++ T++ +E Sbjct: 61 SGYNELKMQLAADLKGDTNQSD---DQEIQKNATLTTIKQKLLIDANQSLRETVDQINEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQASSP 179 + + ++ + R+++ G+GAS L AQN A K ++G+ D++ L A Sbjct: 118 NVDTIINLIHQSDRLLVFGVGASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATADVE 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L IS +G E+ LAA + G +V+ T N+L + A + T +A N Sbjct: 178 QTLCWFISNSGESPEVVLAAKLAKKAGLQVIVTTKLGKNSLTKYADVSIQTSQPMEARNR 237 Query: 240 -ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A+ + H Q ML D+L+ A + + + A S+A V Sbjct: 238 FAATQSLHTQFMLIDILYYAYVSRYYDAAKIATDQSKAAV 277 >UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF6_9LACT Length = 292 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/278 (21%), Positives = 136/278 (48%), Gaps = 4/278 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R + ++K +AD+ + + + LA++ G+S++++ KF +K+G+ GFP Sbjct: 10 LRPYIKSFNDTEKIIADHFIKLGHDVVNKTLSNLADDTGLSEATIFKFVKKIGFDGFPNF 69 Query: 67 KLALSEALASQPESPS-VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K++++ + E + + + + I +D + +KL+ N A+ + EE++++ Sbjct: 70 KISVASNFQNIEERKNELTVFSDISKEDSSYAIAQKLVYSNKLALDNLIGSLDEERINQA 129 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + ++ ++ I G GAS ++A + K ++ F + D H L+ P+D + Sbjct: 130 LNLIYDSQTIHFFGQGASSVIALDSYHKFLRTRFLCNYISDYHMQLSYATKLGPNDCVFL 189 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S++G E A + ++ +TG L + +S +EE A S ++++ Sbjct: 190 FSHSGETNETIEVARILRNNQVNIIVLTGNHHTDLVKLSSISFVVDSEESAFQSETLTSR 249 Query: 246 HAQGMLTDLLFIALIQQDL---ELAPERIRHSEALVKK 280 + D+L++AL+ D + + E+IR + A+ KK Sbjct: 250 ILYLTIIDILYVALMYHDEAKNKDSLEKIRKALAVTKK 287 >UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=Fusobacteriaceae RepID=D1AYR1_STRM9 Length = 281 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 146/278 (52%), Gaps = 7/278 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ S+K +A +L+ + + ++++A E S S+V + +K+G Sbjct: 1 MSILVKLREN-NDFTSSEKDIAKFLMNNYKNIKKIDARKIAKETFTSVSAVTRTCKKIGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L E LA+ + +++ I ++ R++ EKL K + +++ T + + Sbjct: 60 RGFQEFKIDLIEELANLEQQKLEFVNSDIERNNDTRMIIEKLNKLSISSLKETKLLQDPD 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG--FNAAAVRDMHALLATVQASS 178 + + V +++ + I GIGAS +V + +K M+IG NA D+ + A S+ Sbjct: 120 IIDKVVKLIKKKKVIDFYGIGASHIVCLDAQYKFMRIGKVCNAFGPFDLQYIQAV--NST 177 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGG-KVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+L + ISY+G+ ++ + E+LR G + ++IT + N + A+H LY ++E Sbjct: 178 DDNLAIIISYSGMTEDI-IKISEVLRNKGIETVSITMYGSNKVASNANHNLYVTSKESLK 236 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 SA+I + + L D++++ + + +I ++ Sbjct: 237 RSAAIYSRISMLNLIDVIYLKYSNMNFDEVSVKINETQ 274 >UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2G7_BEUC1 Length = 285 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/277 (25%), Positives = 133/277 (48%), Gaps = 2/277 (0%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I+ R A S +++A+ +L +P + +LA++ S++++V+F + LG G+ L Sbjct: 7 IQSRLDQFAPSMRRVAEAILERPQVVLEKTISELASQCETSETTIVRFCRTLGLTGYVQL 66 Query: 67 KLALSEALASQ-PESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +L L+ + + + + H I +D L + K+ +T + TL E L Sbjct: 67 RLELATEIGRENAQRGELGDHGADILAEDGLAAMAAKIAFTDTLGIEETLASLDIEHLER 126 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V + +A R + G+G+SG A + KL +IG A D H + SSP D+ + Sbjct: 127 VVDAIDTAGRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPHDAVTAAALSSPGDVAV 186 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S++G RE + G + +A+T +AL + A L T E S ++++ Sbjct: 187 AFSHSGATREALAFLATAGKHGARTVAVTNSAESALARAADIVLVTSVRETQFRSGAMAS 246 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 AQ M+ D +F+ + Q+ + + ++ + A ++L Sbjct: 247 RIAQLMIVDCIFVGVAQRRYDQTVDALKSTYAAAQEL 283 >UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=Burkholderiaceae RepID=Q3JNN8_BURP1 Length = 339 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 8/281 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI L S++KLAD++L P LS +LA AG SQ ++ +F Q LG GF Sbjct: 9 LPRIETIRAQLRPSERKLADFVLAAPREVLDLSMTELAARAGASQPTIARFCQALGCSGF 68 Query: 64 PALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K+ L++++A P V ++ + D+ + K+ A+ N S + Sbjct: 69 REFKIRLAQSVA-----PGVASVYRDVEPDERAPGIIGKVFDRTIGALIEVRNSLSATSV 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + +L A RI G G SG+ AQ+ K ++G + A D H + +D+ Sbjct: 124 AEAIELLTRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVAYSDPHTFSMSAALLGANDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS TG R++ AA L G KV++IT + + L Q ++ L + E+ + + Sbjct: 184 VVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQLSTVSLASNVAEETDVFSPM 242 Query: 243 SACHAQGMLTDLLFIAL-IQQDLELAPERIRHSEALVKKLV 282 ++ + + D+L + + +++ EL R EA+ ++ + Sbjct: 243 TSRMSHLAIGDILAVGVALRRGPELVDRLGRAKEAITRRRI 283 >UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1Y9_BEUC1 Length = 307 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 9/282 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +R+ L S ++ A+ +L P + + LA +G S S+V + ++LG G+ Sbjct: 18 LAELRRLLPDLPDSVRRTAERVLADPVASVAGTITDLAEASGTSPSAVSRLCRRLGVDGY 77 Query: 64 PALKLAL-SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 PAL++A+ ++A AS + I I D L V L + A++ TL + L Sbjct: 78 PALRIAVVADATASASSPWEIDISRTIGPTDSLEDVAGTLGAATSRAVHDTLAGLDLDVL 137 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + ARR+ L G+ S ++ +L +IG + D+H L P D+ Sbjct: 138 RDVAHAVAGARRVHLYGVSGSAVMTAELQLRLHRIGIATWSFADVHEGLTGAALLGPGDV 197 Query: 183 LLAISYTGVRRELNLAADEMLRVGGK----VLAITGFTPNALQQRASHCLYTIAEEQATN 238 +A+SYTG + EMLR G +A+TG ++L A L T+ EE Sbjct: 198 AIAVSYTGE----TIETLEMLRAAGSRDALTVAVTGAPRSSLAAVADRILVTVTEETTFR 253 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++A ++ + +LL++A+ Q E E + + V++ Sbjct: 254 EGPLAARFSELTVVELLYLAVGQLTYERTTELLTQTALAVRR 295 >UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus RepID=C2HLD1_LACAC Length = 284 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 31/284 (10%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I+ + L + ++ L DY++ P+ S Q+L+ + G+S +++V+F +++G GF L Sbjct: 8 IKGKKSQLPKKEQLLGDYIIANPENVISSSIQKLSKDTGISTATIVRFCREIGTNGFSDL 67 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT--------LNVNS 118 KL L +A+Q + H G+ G IK AA + + LN NS Sbjct: 68 KLQL---VAAQSSVNNNDYHEFDAGE------GIAAIKNTMAARFESAIEATQSGLNDNS 118 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 EK V + ++ I++ G GASG+VA + K M++G N + D+H LA + + + Sbjct: 119 VEK---AVRKIYNSSSILVYGAGASGIVASDMYQKFMRVGKNINYISDLHVALAQLASFT 175 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQAT 237 DDLL+ IS G E++ + G L +T + + ++A L T E + Sbjct: 176 SDDLLILISNDGKTTEVSDIQKVADKFGIPTLLLTANPRSFVAKKADLVLLTQDIGEPSI 235 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S + ++ +Q + D+L + + HS+ ++KKL Sbjct: 236 RSGATTSLISQMFVVDVLVFSYVS----------VHSDEVLKKL 269 >UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4B4_9BACL Length = 288 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 1/255 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L++IR + L ++ +A+Y+L + HLS + LA + S +SV++F + +GY Sbjct: 7 NILIKIRDMKENLTPVERMVAEYILANTEDIPHLSIKSLAKLSKTSDASVLRFCKTMGYS 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + +++S AL S + + I+ D L + + + N ++ TL+V + Sbjct: 67 GYRSFIVSISAALGSMDDERKDQ-YTDIQPGDDLDTIIANISRNNMKSIEDTLSVLDRGE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V LR++ RI+ GIGASGLV Q+ K +I + D H+ L D Sbjct: 126 VARAVKALRASNRIVFFGIGASGLVCQDGEQKFSRINKMCHSYTDGHSQLTAATLLGKGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G E+ + + +AIT + + L +A L E S + Sbjct: 186 VAIFVSNSGNTLEIIETLEIAKKNNATTVAITKYNKSELADKADILLGISTPEITMRSGA 245 Query: 242 ISACHAQGMLTDLLF 256 + + A + D+LF Sbjct: 246 MGSRIAMLTIIDMLF 260 >UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQA6_9CLOT Length = 290 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 4/254 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI+ Y L+ + KK+AD+++ PD A H++ QLA VS++SVV+F Q L Y GF Sbjct: 17 RIQATYSALSGASKKIADFVIDHPDQAVHMTVVQLAESCEVSEASVVRFCQCLQYAGFYE 76 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL +LA++ S I I +D + EK+ A+ TL + + + Sbjct: 77 FKL----SLAAEIVPASQMIQEDITVEDTEPTILEKVFAGEQQALQETLQMLNRQDFISA 132 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V + + ++ G + +AQ+ ++L++ G ++ D + L D+ + Sbjct: 133 VNHIAFSNKVEFFSCGNARPIAQDAHYRLLRTGIDSRIGIDDYDCLIHASMLRTGDVAIG 192 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++G + +E + G + ITG + + + C+ + ++E S ++++ Sbjct: 193 ISHSGSTKNTIKMLEEAKKNGATTICITGMEKAPITRVSDICMVSHSKETMFRSMAMASR 252 Query: 246 HAQGMLTDLLFIAL 259 AQ + D L +A+ Sbjct: 253 IAQMAIIDALVVAV 266 >UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIQ0_CLOPH Length = 284 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 119/252 (47%), Gaps = 1/252 (0%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI Y +S+K +AD++ P+ + S LA GV ++V +F + L G+ Sbjct: 8 RIESSYSKFTKSEKIVADFVFENPEKVLYTSITDLAEICGVGDTTVFRFCKALKLNGYQE 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K+ L++ +A + S I+ + DD ++ + +K + + AA+ T + E + + Sbjct: 68 FKMFLAQDIAVRTGSD-YTINGSVSQDDDIQTICKKALAVDIAALTETFEGLNFEAVTKV 126 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V M+ +A ++ G+G+SG++A K M+I N + D H + S DL + Sbjct: 127 VDMISNANKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSSRDLAII 186 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 SY+G ++ A+ G KV++IT + + L + + + E + + S Sbjct: 187 FSYSGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVVIPCGSNEGPLDGGASSTS 246 Query: 246 HAQGMLTDLLFI 257 Q + D+L++ Sbjct: 247 MVQFYILDILYL 258 >UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q9_9CLOT Length = 287 Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 132/257 (51%), Gaps = 11/257 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLGYKG 62 L +I + Y L + K+LADY+L P + S L + + S++SVVKF + LG+ G Sbjct: 11 LAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVVKFYRLLGFDG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + K+ L++ L ++ S + I DD + +K+ AM ++L+ N++ Sbjct: 71 FKSFKIKLAQELVNRTFYHS---ESDITIDDEPTEIKKKVF---LGAM-SSLSKNADIAA 123 Query: 123 HECV---TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 EC+ +L SA+RII+ G GAS + Q ++L ++G N +D H A + P Sbjct: 124 GECMDAQKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHPRP 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D++L +S +G +L + + + ITG +++ + + L T++EE+ + Sbjct: 184 GDVILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNILT 243 Query: 240 ASISACHAQGMLTDLLF 256 ++++ +Q L D LF Sbjct: 244 DALNSRVSQFCLIDALF 260 >UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0W9_9CLOT Length = 310 Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 64/284 (22%), Positives = 138/284 (48%), Gaps = 17/284 (5%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI +Y L++S+KK+AD++ A L+ +++A EAGVS+ S+++F++ +G GF Sbjct: 32 LFRIATKYMALSKSEKKVADFIKNFNGKAEKLTMKKVAKEAGVSEPSIMRFSKSIGLDGF 91 Query: 64 PALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKL---IKENTAAMYATLNVNSE 119 LK L + E P+H I +D + ++ K+ ++ +M ++++ S Sbjct: 92 NELKYCLMKT-KKDDEGTMKPLHGFDINREDTIDMIPGKIVMTVENQINSMLESISLKSY 150 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + C+ +A+ + + + S A + A KL+ +G N D + + + Sbjct: 151 SDMINCII---NAKNVDIYSVENSVSSANDLATKLLYLGINVKMYTDSYLQKISAYNLTS 207 Query: 180 DDLLLAISYTGVRRELNLAADEMLRV----GGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 +D+ + ISY+G ++ EM++ G + IT + + + + A + T +++ Sbjct: 208 EDVAIGISYSGNSKD----TVEMIKTAKKRGATTVVITNYKDSKIVKYADILICTSSDQM 263 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A S Q ++ D++++ +I D + E + +E ++ Sbjct: 264 LYGDAIFSRA-IQLVINDMIYMGIIHSDYDKYIEILNKNEKAIR 306 >UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, RpiR family n=15 Tax=Firmicutes RepID=Q71VW8_LISMF Length = 268 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 105/215 (48%), Gaps = 13/215 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I+Q Y L +K++A Y+L + D ++++ ++LA E G S S++ +F + + Sbjct: 1 MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEETGTSISTITRFCRHVRC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ ++ A P G D L E++ + T+ + Sbjct: 61 DSFVDLKMRVNTAATMVPS----------LGYDDL---FEEVYSFYHKVIDNTVKLIEPA 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E V ++ A+R+ + G+G+SGL A + +L+++G N +V D H ++ T ++ + Sbjct: 108 KIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITTKE 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 D ++ IS +G EL A + KV T F Sbjct: 168 DFVIGISNSGNTPELVTALKIAKKNKSKVATFTSF 202 >UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8T9_9ACTO Length = 312 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 4/258 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR LA S +K+ + +L P H S+ +L G SQ++V +F + +G + + L Sbjct: 28 IRTELPRLAGSLRKVGELILEDPAAVTHCSAAELGRRTGTSQATVTRFCRAIGLESYQHL 87 Query: 67 --KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +LA + S I I DD L V + + + A+ T+ + L Sbjct: 88 LIELAQERGRGEVSDWGSAEIGPDISPDDSLERVVQVVGSADLRAIQQTIERIDLDALER 147 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 L ARRI + G+G SG VAQ +L +IG ++H + +P D+ + Sbjct: 148 AAQALAKARRIDVYGVGGSGAVAQETETRLFRIGCQVRGWTEVHGAATSAALLTPADVAI 207 Query: 185 AISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 IS++G RE L EM + G +AIT + L + A L + E + + SI Sbjct: 208 GISHSGATRE-TLEPFEMAKERGATTIAITTDPRSPLAKAADIRLISATSETSFRTGSIG 266 Query: 244 ACHAQGMLTDLLFIALIQ 261 H+ M+ D L++ + Q Sbjct: 267 GRHSVLMIVDCLYVRVGQ 284 >UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=D1YCB1_PROAC Length = 290 Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 7/268 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI + ++ ++A +L +PD S+ QLA AGVS ++VV+F + LG G+ Sbjct: 6 LPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMSGY 65 Query: 64 PALKLALSEALASQP---ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 L+ L+ L+ + E SV I DD L + K+ + T + Sbjct: 66 RELRTELARDLSRRTLELERSSVA-EGTITLDDSLTQMITKIAFHEARTIENTARAVDAD 124 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + A R L G+G+SGLVA + + KL +IG +D H L Sbjct: 125 ELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRP 184 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + L IS++G +E+ A + G +A+TG + + + A H L T A E + Sbjct: 185 CVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRAG 244 Query: 241 SISACHAQGMLTDLLFIALIQ---QDLE 265 ++S+ AQ + D LF + Q DLE Sbjct: 245 AMSSRMAQLAVVDFLFARVAQLCMDDLE 272 >UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDH7_9ACTO Length = 342 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 10/283 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+R+R GL S++++A+ +L P L+ +LA S ++VV+F Q++GY + Sbjct: 13 LVRVRAALPGLRPSERRIAEAILDDPHATAGLTVAELAAACDTSTTTVVRFYQRIGYGRY 72 Query: 64 PALKLALS-EALASQPESPSVP-IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 L+L L+ EA Q E+ ++P I DD + + K+ T ++ T + + Sbjct: 73 KDLRLDLTREATREQLETANLPAASGDIDRDDTIDDIIAKVAANETLSIADTAEILDRDA 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + +ARR+ G+GASG V + KL +IG A + D A + Sbjct: 133 LARAVDCVLNARRVDSFGVGASGFVGLDLQQKLTRIGRTALSWLDTDAAWSAAVTLDEQC 192 Query: 182 LLLAISYTGVRRE----LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +AIS+TG L +AA E G +AIT AL + A L T A E Sbjct: 193 VAIAISHTGTTAATVEFLAMAAAE----GATTIAITNHDNTALAETADVVLTTAARETRF 248 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S ++ + AQ M+ D LF + + + + +R + A V + Sbjct: 249 RSGALGSRIAQLMVVDCLFTGVARASYDASMSALRKTYAAVHR 291 >UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9S0_9ACTN Length = 282 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 126/264 (47%), Gaps = 2/264 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+ +++ ++ S++++ Y+L +P+ ++ +LA VS +++ + +KL G+ Sbjct: 7 LVLLKENKDRVSTSEQQIITYILKKPEAIVGVTIHELAQMTFVSAATISRLLRKLSLGGY 66 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 + L LAS S I + I D + + K++++ ++ T +N+ + + Sbjct: 67 KEFQQYLIYELASMKTSRQSSIED-INPKDSTKQIMFKIMRKTIESITLTEKLNNPKTID 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 C ++ +AR I + G+G+S L AQ+ +K ++ + D H L S D+ Sbjct: 126 SCAELIHNARHITIFGMGSSLLSAQDLQYKFLRANIDCTLSADWHMQLIAANNMSDGDVA 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATNSASI 242 +A SY+GV E GGKV+AIT L + A LY + E S++ Sbjct: 186 IAFSYSGVTPETLRCVHAAQDHGGKVIAITRSVNSTELVRHADIVLYVASTEPLLRSSAG 245 Query: 243 SACHAQGMLTDLLFIALIQQDLEL 266 ++ Q M+ D LF L+ + ++ Sbjct: 246 TSRITQLMIVDTLFSTLVNKHYDV 269 >UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0I0X8_VIBCH Length = 282 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/267 (22%), Positives = 130/267 (48%), Gaps = 6/267 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 +N L R+R +G + K +AD+++ D+A++L+ +LA + S+++V++ + LG+ Sbjct: 7 VNLLSRLRYGMEGYSPKLKTVADFIVSNADSAQYLTITELARDTMTSEATVIRLCRDLGF 66 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ ++AL+ + SQP+ +N + +D R+ + + ++ T + + Sbjct: 67 KGYSDFRMALAIEI-SQPQFTK---NNDVAKEDGDRI--DDATQSAITSLQDTSILIDRK 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +++ M+ A I G+GAS +V + +++L +IG ++ D H S+P Sbjct: 121 QINRICQMIHQADNIHCVGVGASSIVGRYLSFRLTRIGKSSTMFEDTHIAAMRAVKSTPS 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL AIS +G +++ A + V+++T + L + + E Sbjct: 181 DLWFAISSSGSTKDVVYVATRAKKQQSPVVSLTNIRHSPLSVTSDEVMVAARPEGPLTGG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELA 267 + ++ + +L D+L L+ + E A Sbjct: 241 AFASKVSALLLVDILINQLVAEHAEYA 267 >UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AH41_LEIXX Length = 289 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 2/258 (0%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +RQ L+ ++ ++A ++ P L+ +LA SQ+S+ +F Q L Y G+ Sbjct: 8 VRQAVPRLSATEARIAQTVIEHPQRVVDLTIAELAAVCDASQASIARFCQALRYSGYREF 67 Query: 67 KLALSEALASQPESPSVP--IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +LA++ A + + + ++I D L+ V K+ + T A+ T E L Sbjct: 68 RLAVAAATSREQATRERFELTESEIDPSDSLQEVVAKIAYQETLAIERTARELDAEALDA 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V + +A R+ L GIG+S L AQ+ KL +IG A D H L++ P ++ + Sbjct: 128 VVAAIIAASRVDLYGIGSSILTAQDLQQKLSRIGLTAFCSVDSHLALSSAALQKPGNVAI 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S++G RE N A G +AIT +++ + L T A E S ++++ Sbjct: 188 AFSHSGETRETNHALAVARAAGATTVAITNVPESSIAAVSDLLLMTQARENFYRSGAMAS 247 Query: 245 CHAQGMLTDLLFIALIQQ 262 AQ L D LF+ + Q+ Sbjct: 248 RTAQLALVDFLFVRVAQR 265 >UniRef50_P46117 Uncharacterized HTH-type transcriptional regulator in aarA 3'region n=5 Tax=Enterobacteriaceae RepID=YARA_PROST Length = 282 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 138/274 (50%), Gaps = 24/274 (8%) Query: 17 SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL-ALSEALA 75 ++++LA +LL D ++ +LA AGVS +SV++F +++GY+G+ K+ LS+ Sbjct: 20 TEQRLARFLLDSRDNFVAMNVAELAQAAGVSSASVIRFTRQMGYRGYSDFKVDYLSDEKQ 79 Query: 76 SQPESPSVPIHNQIRGDDPLRLV---GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + ES S ++ DD +++ G+ I A+ +L + + E + A Sbjct: 80 YKAESLSGSLNPY---DDTEQIIAKSGQMFI----TAIEKSLELLDPNTMDEIAQKIVEA 132 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 +RI+L G+G S +VA + +KL+++ A D+H L+ DDL++AI+ G Sbjct: 133 KRIVLFGVGTSAIVAYDIFYKLIRVNKYALFSPDLHVQLSYSSNVDADDLVIAITAKGNT 192 Query: 193 RELNLAADEMLRVGGK----VLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 ++N ML++ K + +T F + + A L +EQ + I+ Q Sbjct: 193 PDIN----HMLKLANKKGCSTIVLTRFGQDEAVRLADLVLPYFYDEQLFQTGVITPQVLQ 248 Query: 249 GMLTDLLF---IALIQQDLELAPERIRHSEALVK 279 ++ D LF + L +D+ LA ++ R EA+++ Sbjct: 249 MVVFDTLFFKYLTLTNEDVVLALQKER--EAIIQ 280 >UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2JBJ8_FRASC Length = 299 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 108/246 (43%), Gaps = 4/246 (1%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L S +K+ +L P HL+ LA+ G S ++VV+F Q LG KGF LK+ L Sbjct: 34 LTPSGRKIGQLILDDPREIVHLTVTDLADRTGTSVATVVRFCQDLGLKGFADLKIRL--- 90 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 A + P +H + D + EK++ +A+ T V L+ A Sbjct: 91 -AGEAIPPERGLHEAVTHADSPATILEKILHSTESALSETTRTVDRAAFTRAVDALQCAD 149 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 R++L G G S +AQ+ A++ +G A A D H + P LAIS+TG R Sbjct: 150 RVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPADAHVQHVAARLLPPASACLAISHTGQTR 209 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 E A G +A+T F + L + A L + E ++S+ + D Sbjct: 210 ETLAGAAAARAAGATTIALTSFFRSPLTRLADVALVAGSSETNYRVEAMSSRIIHATVLD 269 Query: 254 LLFIAL 259 LF+A+ Sbjct: 270 ALFVAV 275 >UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PSH8_9ACTO Length = 309 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 1/188 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L R+R GL+ + ++A LL +P A L+ +LA G S +V +F + L GF Sbjct: 7 LTRLRAEQPGLSGALGRIAAALLAEPGEAARLTITELAERTGTSPGTVTRFCRTLRLAGF 66 Query: 64 PALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 LK+AL+E + + P S I I D L V + ++ NT A+ T + + Sbjct: 67 AELKVALAEEVGRAAPSRWSTDIGRSIEPADELDQVLKVIVGANTQALLDTADQLDLGAV 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + AR I L G+G SG+ A +L +IGF ++H+ L +V + D+ Sbjct: 127 DEAARAISDARAIHLFGVGTSGITADELRIRLHRIGFACWVWPELHSALVSVALADRRDV 186 Query: 183 LLAISYTG 190 ++ IS++G Sbjct: 187 VIGISHSG 194 >UniRef50_A6M2X4 Transcriptional regulator, RpiR family n=4 Tax=Clostridiales RepID=A6M2X4_CLOB8 Length = 286 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 12/257 (4%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L Q++ LA Y++ + LS QQL+ + VS+S++ +F +K+G GF LK+ +++ Sbjct: 13 LTQTENILAQYIIKNKNEISTLSIQQLSEKTFVSKSAIHRFCKKIGVDGFNELKVKVAQD 72 Query: 74 LASQPESPSVPIHNQIRGDDPLR------LVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 +A + + I N I + P ++ +KLIK + T EKL+ CV+ Sbjct: 73 IAEESK-----IENDIDVNFPFLEGDTQGVIAQKLIKLYETTIRDTYKYIDVEKLNTCVS 127 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +L A I + + VA+NF K+ IG + + T AS + L +S Sbjct: 128 ILHKADVIDIYTHAHNSNVAENFMDKMRSIGRMVNCTKSFYDQRCTATASKKNHAALLLS 187 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH- 246 Y+G L ++ + + G + + I +++ + H LY E N S + H Sbjct: 188 YSGKSNFLKPISEVLYKRGIETIWIGRVGSSSVPEYIKHRLYISDRENFKNRISQFSSHI 247 Query: 247 AQGMLTDLLFIALIQQD 263 A + DL++ + ++D Sbjct: 248 AMQYMLDLIYSCIFKRD 264 >UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=Lactobacillales RepID=D0RS60_9STRE Length = 277 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 14/262 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Y L +KK+ADY L LS+Q ++ VS S+ +FA+K G+ Sbjct: 4 NILPVIESVYGSLTHLEKKIADYFLSAEALTADLSAQAVSQRLYVSVPSLTRFAKKCGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ E+ +S+ ++ S + + D GE L K T ++ EE+ Sbjct: 64 GYRQFIFEFQES-SSESKNVSRDLTRNVLSD-----YGELLNK--------TFSLIDEEQ 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ML +A R+ + G G+SGLVA+ ++ M++G A+ D H + +PD Sbjct: 110 FLRVGDMLNNAGRVYIYGQGSSGLVAREMEFRFMRLGMVCKAITDDHMIRMNRVMLNPDC 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G + + A +VG K + +T + L+Q+ + ++ + Sbjct: 170 LVIGISISGETKIITQAIQNAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNN 229 Query: 242 ISACHAQGMLTDLLFIALIQQD 263 IS ++ D+ + + D Sbjct: 230 ISPQFPVLVVMDIFYAYYMDLD 251 >UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RHA3_9MOLU Length = 288 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 130/281 (46%), Gaps = 14/281 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI+ Y L S+KK+ADY+L LS LA E VSQ +V++F + +GY F Sbjct: 7 FRIKTIYNILRPSEKKVADYILNYCGKLEDLSMTLLAKEVAVSQPTVMRFVKAIGYDSFK 66 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KL L++ + + + I DD + + K++ T+ + L S + Sbjct: 67 QFKLELAKNY-DKENNIDILYGFSINTDDKIMDLPGKIVATATSMLENALKSLSLVNYQK 125 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS--SPDDL 182 V ++ ++ I + + S VA + KL+ +G + D + L ++ AS + D L Sbjct: 126 TVALINQSQHISIYAVENSMGVAHDLMTKLIYLGKSVTCHSDYY--LQSIDASNLTRDSL 183 Query: 183 LLAISYTGVRRE----LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 + ISY+G + L +A D G + +AI F N + R + + + +Q Sbjct: 184 AIGISYSGNSKNTVEVLKIAKD----AGAQTIAIVNF-ENTMLTRYGDIVLSTSNDQFLY 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +I + AQ L D++++ +I D + +++ H L+K Sbjct: 239 GDAIFSRTAQIALVDMIYMGVIISDYDNYTKKLDHYSRLIK 279 >UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9W4_9FIRM Length = 280 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 21/288 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL ++ Y L +++KK+ADY+ +S +LA E V+ +SV +F + +G K Sbjct: 5 NVLLSMQLSYNQLTRTEKKIADYVQKNAQKVLFMSITELAEECHVADASVHRFCRTIGAK 64 Query: 62 GFPALKLALSEALA-------SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL 114 G+ K+ LS + S+ E PI Q+ +K + A+ T Sbjct: 65 GYQEFKMWLSINMGHEKGEEESEEEDGKEPIFQQV-------------LKSHLEAINETN 111 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 + +EK+ + V ML AR+I+ G+G S A K + + D H Sbjct: 112 QLLDKEKVDQAVRMLTEARQIMFFGVGDSKTAAIEANNKFLHVTPKVMCAGDTHLQAMAA 171 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 + +DLL +SY+G ++ A G KV++IT F + L + + L ++E Sbjct: 172 SMMTEEDLLFVVSYSGSTKDTVEVAQIAKEAGAKVISITRFLKSPLTEFSDCVLICGSKE 231 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKKL 281 S+ A +Q + D+L+ + + + A E R + + A+V KL Sbjct: 232 GPLEGGSMGAKLSQLHIIDILYQCYFKANGKKARENRQKTANAVVNKL 279 >UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n=3 Tax=Listeria monocytogenes RepID=C8JWL0_LISMO Length = 273 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 19/286 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I + L++S++K+A +L PD +LS LA A V +S++V+F++K+G Sbjct: 1 MDLLATISSYFPSLSKSEQKVAQLILSNPDEVENLSINDLALMANVGESTIVRFSRKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL + SQ ++ + D + + ++ + T + +E Sbjct: 61 TGFQDLKIALVKYQTSQKQNIT----------DESNEAKDLVYRQFVDGLQDTKSFIEQE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + M+ A + + +G S +A + +L ++G V D H V Sbjct: 111 KLEQAAKMIHRAEHVYILSVGTSAFIAMQLSNRLKRLGKFVEFVPDGHLQSIYVTMVKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ + + G V+ ++ F + + Q L ++E +++ Sbjct: 171 DIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQMGDVSLVASSKEFLSDAG 230 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE-----RIRHSEALVKKL 281 S SA +Q L D L L+ ++ P R ++ALVK++ Sbjct: 231 SFSAEVSQLYLLDTLIKVLV----DINPSSYHNIRSLTNKALVKRI 272 >UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NFU9_EUBSP Length = 285 Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 111/229 (48%), Gaps = 8/229 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I+++Y + +++K+AD++L P A + +LA ++GVS ++VV+ +GY G+ Sbjct: 18 IKEQYDYIFSAERKVADFVLQNPQKAVDSNVSELAKQSGVSDATVVRMCHHIGYTGYYQF 77 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 +++L+ L + S + R EKL +E M A + + + CV Sbjct: 78 RISLARDLGKKQYGSSALAES--------RDAVEKLFQEYAQTMLAIGSRIDADVMWNCV 129 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L++ + + +G + +AQ ++L ++G + + V + DDLL+AI Sbjct: 130 NLLKTCKEAHIMAVGNTCPLAQYMGFRLGRLGIKSTYNVAAEYFMNHVNLADQDDLLIAI 189 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 S +G R++ + G K +AIT F + + A + L + +E+ Sbjct: 190 SQSGTSRQVIQGLELGKEKGLKSIAITAFAQSPVSNLADYVLLSAGKEE 238 >UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A5_9CLOT Length = 282 Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 134/275 (48%), Gaps = 2/275 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R Y+ L+ ++ ++ +Y+L P + +LA E+ S ++VV+ +K+ Sbjct: 6 MSVLIKLRD-YRNLSAAENQVREYILKYPKKVLEYTVYELAKESFTSPATVVRLCKKIDI 64 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF LK+ L+E Q ++ I +D + EK+ + T + +E Sbjct: 65 KGFARLKVLLAEETKYFQDMKLNLLDTTTIEKNDSPHAIIEKITNIAVKTIEETRVLVNE 124 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ + +L+ A + G+GAS VA + +K M+IG N + S Sbjct: 125 KQFMQVARLLQKAVIVDFYGVGASSPVAIDAQYKFMRIGKNVITYQLYDRQYVQAVNSDA 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + ISY+G +E+ A + + G V+A+T N+L + A + L+ A+E S Sbjct: 185 SHVGIIISYSGETKEMLKIAGILQKNGTPVVAVTSSGENSLNRIADYNLFVTAKETVFRS 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 ++++ AQ + D+L+ D + + ++I+ + Sbjct: 245 GAMASRTAQLYIIDILYALYCSLDYDESIKKIQQT 279 >UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Clostridiales RepID=C2L140_9FIRM Length = 285 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 1/277 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +IR Y +++KK+ADY+L PD +S LA V +SV +F + + KG+ Sbjct: 6 LTKIRSAYNQFTKAEKKVADYILQNPDQVLFMSISDLAETCKVGDTSVFRFCKTMNVKGY 65 Query: 64 PALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K+ LS ++ + ES N D+ + + K+++E ++ T ++ K+ Sbjct: 66 QEFKMTLSLSMRGNGKESKEGDGGNVSLQDNNIAELAGKVLEETIDSIKETHSLLDFNKV 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + L A+RI+ G+GAS L A K +I + L + D+ Sbjct: 126 TEAMNALSKAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATMERGDV 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + SY+G R++ A G V++IT F + L L A + S Sbjct: 186 AVIFSYSGATRDIVEIAKLAKESGATVVSITRFQKSELTDYTDILLLCGANVGSLQKGST 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 SA +Q L D+++ ++ E + + + +K Sbjct: 246 SAEISQLFLVDIMYTEYYRRHYEYCNQILEKTTVAIK 282 >UniRef50_D1AP79 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AP79_SEBTE Length = 261 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 128/275 (46%), Gaps = 28/275 (10%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR +Y+ L +++K++ Y++ + R L + LA+ S +++V+ ++K+G+ GF + Sbjct: 7 IRDKYKNLNETEKEILRYIISNSNKIRGLRIKDLADAVFCSPNTIVRMSKKMGFTGFSEM 66 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K + E L + VPI D L+ T + + E L Sbjct: 67 KHVIFEEL--EKNFSQVPISEDGLYKDLLK----------------TKELINSELLDYLA 108 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ + I + G+G S L A F+ +L +G A + D HA+L +D+ L I Sbjct: 109 ALIVKKKNISIFGLGPSRLSADIFSMRLTFLGIAAISFIDQHAMLFYANKIKENDICLFI 168 Query: 187 SYTGVRRELNLAADEMLRVG--GKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 S++G ++ + ++ G G ++++TG + N L + A H ++ + A I++ Sbjct: 169 SFSGEQK--GILGPAVIAKGRKGVIISLTGLSDNELSRIADHSMFFKTTSMYYDGADITS 226 Query: 245 CHAQGMLTDLLF--IALIQQDLEL----APERIRH 273 M+ D LF + LI +D + PE I++ Sbjct: 227 RVPADMVLDYLFSKMVLIMKDEDRLTSEEPEFIKY 261 >UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PED1_BACCO Length = 289 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 3/193 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ + L++S+KKL +Y+L + ++ +LA +AGVS ++VV+F + +G Sbjct: 6 NIILQIKSKLTSLSKSEKKLGEYILSHAVETVNDNTSELAKKAGVSPATVVRFCRSIGLS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L A I+ I ++ + ++ +KL ++ T N+ Sbjct: 66 GFSQLKIRL---YADASGGLDREIYTDITPNEDITMIADKLALRFNQSITQTANLLETSC 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + M+ + I + GIGAS + A++F K +IG D H L +++ +S D Sbjct: 123 IEKITAMVDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDHHLLGSSLINASKDC 182 Query: 182 LLLAISYTGVRRE 194 + +AIS +G E Sbjct: 183 MFVAISNSGETNE 195 >UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=cellular organisms RepID=Q1QSE2_CHRSD Length = 289 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 9/255 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R+R + +S++K+A ++L P+ H+ LA EA VS+ +VV+F + LG GF Sbjct: 9 MRRRMEHFRRSEQKVARFVLRHPEDVIHMRIVDLATEAKVSEPTVVRFCRALGCNGFQDF 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 KL L++ LA+ + +++ D + + + + + L + V Sbjct: 69 KLKLAQMLATGSQFAQFSMNDS----DSVAEFAHNIFDSTVGTLLSVRDRLDHAALGKAV 124 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 T L A R+ G GASG VA + K ++ + AA D H + +P D+++AI Sbjct: 125 TALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTAAYTDPHMQNMSAVTLTPRDVVVAI 184 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTP--NALQQRASHCLYTIAEEQATNSASISA 244 S TG R L +A+ + R G + G P + L + LY E +S+ Sbjct: 185 SQTGRTRAL-VASVRLARETGAT--VIGLCPSDSPLASEVTLPLYIDVHEDTEIYTPMSS 241 Query: 245 CHAQGMLTDLLFIAL 259 A ++ D+L + + Sbjct: 242 RVAHLVIIDVLAVGV 256 >UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEV7_ACHLI Length = 281 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/285 (24%), Positives = 140/285 (49%), Gaps = 10/285 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L + + + L+ +++ + DYL+ + S +++A A S +SVV+ +KLGY Sbjct: 1 MSVMLNMLKNKEALSMAERIVLDYLIENKTLLKDFSVEKIAEAAYTSPASVVRMCKKLGY 60 Query: 61 KGFPALKL--ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GF K+ L+ + PE+ I+ + G+K I+ N A+ T+N+ Sbjct: 61 NGFKDFKIDFILANSKVEIPETSEYTDVILIKDQNN----GKKAIENNIRALEETINLYD 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E+ + +++ +AR+I++ G G+S LV ++ KL +I A + H + Sbjct: 117 EKTYTKAASLIMNARKILIFGKGSSFLVCKDLEMKLRRINKFCVAQGESHDQFVDASFIN 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGK--VLAITGFTPNALQQRASHCLYTIAEEQA 236 D+++ IS +G +E+ +A +L K +++IT + L + LYT A E Sbjct: 177 NKDVVIFISNSGKTKEIISSA--LLAKENKTPIISITRIGSSILADISDVVLYTSALESE 234 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SA++++ +Q + D L+ D++ + + + + +KK Sbjct: 235 FRSAAMTSRISQMSVVDALYAKCAYTDIDRSIQALETTYRTIKKF 279 >UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU1_PETMO Length = 269 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/275 (22%), Positives = 128/275 (46%), Gaps = 13/275 (4%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I+ Y L +K+ A Y++ +P H S +L+N AG S++++ + +K+GY G+ Sbjct: 5 KIKGIYNSLTNKEKQAAQYIIERPGDVIHYSITELSNWAGTSETTIYRVLKKVGYSGYQK 64 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL L+ L S P + D ++ + + A+ L +K+ Sbjct: 65 FKLELAREL-------STPTLDSKESKDLFDMIYNRTVN----ALTDILRQVDRDKITHA 113 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 ++ ++++++ +G S +A + + K +GF + A D H + DD+++A Sbjct: 114 SEIIMNSKKLLFYAVGRSFPIALDASLKFAALGFASTAYSDPHMQVIVASNLEKDDVVIA 173 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++GV R+ +A G + +T + L + + LYT AE + ++S Sbjct: 174 ISHSGVIRDTYKSAQVAKEAGAFTIGMTAGVNSPLSKIVNLVLYTSAEMPQESEFTVSRI 233 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + +LL+ + + + L + R S+A+ K Sbjct: 234 -GEMFMVELLYNS-VASKMSLKNKESRISQAMKTK 266 >UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Staphylococcus RepID=Q4L9T6_STAHJ Length = 268 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 18/252 (7%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI++ L + DKK+ +Y+ + LA G S +++ +F+ KL Y F Sbjct: 6 RIQRSRHVLTKMDKKIIEYIQTHELDENFSTINSLAYAIGTSPATITRFSGKLNYANFQD 65 Query: 66 LKLALSEALASQ--PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 +K L + + +P V + ++ + ++ GE + SEEK+ Sbjct: 66 MKFNLQHEKSEKVVENAPLVQLIHRYH-QNIIQQTGEFI---------------SEEKIK 109 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 L++ R++ G+G+SGL A F ++ M++G + D H + + S D+ Sbjct: 110 RLAHNLKTCRQVNFAGLGSSGLTASEFYYRTMRMGIKGSVSTDAHQMKISASLLSSRDMF 169 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AIS +G EL AA G V+ IT F +AL + A L T A+ +S I+ Sbjct: 170 VAISNSGETLELIEAAKIARNQGAYVVVITNFEGSALTKNADLVLITTAQSSNNDSKFIN 229 Query: 244 ACHAQGMLTDLL 255 + A L D++ Sbjct: 230 SQIATLFLLDIV 241 >UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD92E Length = 288 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 115/237 (48%), Gaps = 10/237 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +I Y L ++K+LADY+L ++ LA G S ++VV+F +K G GF Sbjct: 8 LEKIFSIYPVLFDAEKRLADYVLQNEAKVVDMTVSDLAAACGTSDATVVRFCKKCGCNGF 67 Query: 64 PALKLALSEALASQPESPSVPI--HNQI---RGDDPLRLVGEKLIKENTAAMYATLNVNS 118 LK+ +++ +A++P S PI N++ R D LR + + TL Sbjct: 68 HHLKINMAKEMATKP-SDGAPIVGSNELDCARMDVSLR----NIFASKQEELRQTLAEID 122 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 V +R+AR I +G + VA + A+K ++G A + +LA + ++ Sbjct: 123 PAVFRSVVERIRAARFIFCAAMGNTIPVAMDAAYKFNELGLTAISAPVWENMLAMMHTAT 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 PDD+LLAIS +G ++L G ++ +T +++ + + L+ +++E+ Sbjct: 183 PDDVLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQER 239 >UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU45_9FIRM Length = 277 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 117/228 (51%), Gaps = 12/228 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L RI + L+ ++ LA Y++ + +++ ++A E GVS +++ +F +K+G Sbjct: 1 MGVLERIEANFVHLSPKEQLLATYIMQESPYFTNITISEMAKETGVSAATITRFCRKVGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F LK+ L AS+ ES S H D + ++I+ T + SE Sbjct: 61 ESFVDLKIQLQ---ASEGESASN--HQNHDMFDTVSEFYNRIIQR-------TSELQSEY 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +L A RI++ G+G+SGL A+ A +L ++G A + D H ++ + + Sbjct: 109 QLRQLIQVLSQANRIMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVTRSS 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL 228 D+++AIS +G +++ A + G ++AIT ++L + A L Sbjct: 169 DVVIAISNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKLADETL 216 >UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=Bacteria RepID=D1AUV3_STRM9 Length = 272 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/255 (20%), Positives = 125/255 (49%), Gaps = 11/255 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+ Y ++ + K+ADY++ + D + ++ + VS++++V+F +K+G+ Sbjct: 1 MKYITLIQSFYPSFSKQEIKVADYVIKEKDAICFMPLHEITKKINVSEATIVRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF KL ++ +A+ + + H + + +I+ + T N+ ++E Sbjct: 61 KGFIDFKLEVAREIATIEDERNTKEH-------YIENIEYNIIE----TIKNTKNLINKE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + +++++ + G+GASG+ A F + M+ G +V D H + ++ Sbjct: 110 DVENAIEAIENSKKLYVFGMGASGVAALEFQNRFMRFGKIGHSVSDGHFQVMYASTTTEK 169 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +L G K++AIT + + + + + + T +E N Sbjct: 170 DVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPIAKLSDIVILTSGKETLLNGG 229 Query: 241 SISACHAQGMLTDLL 255 ++ + +Q + D+L Sbjct: 230 ALVSKMSQLYIIDVL 244 >UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2D0_9BACL Length = 284 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 5/246 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L +S++K A Y+L LS +A++AG S +++ + + LG GFP LK+ LS Sbjct: 17 LPESERKAAQYILTASAEVSGLSIHAVADKAGTSAAAITRLCRSLGLSGFPDLKMRLSVD 76 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 A P P + I + ++ V +K + + A+ + E + + V R A Sbjct: 77 NAK----PQRPGYYDIERGETIQNVIQKTVSNSLQAIQDMMLHLQPELIEQVVDSFREAS 132 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 I + G+GAS +VA + A K +++G A A++D H + A + ++ P L + ISY+G + Sbjct: 133 VIHMYGVGASAIVAADAAQKWLRLGKQAFALQDEHLIAAALASAPPGALFMGISYSGNTK 192 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHAQGMLT 252 E+ + G + + ++ F + + + A LYT +AT S + S+ AQ ++ Sbjct: 193 EVLQLFRVAQKYGVRTIGLSRFGNHKVAELADLMLYTPQAPEATLRSGASSSRLAQLVMI 252 Query: 253 DLLFIA 258 D+LF A Sbjct: 253 DILFFA 258 >UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax=Staphylococcus RepID=A5IV96_STAA9 Length = 290 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 126/257 (49%), Gaps = 7/257 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I +Y + +++KK+A ++L P + SQ LA+ +S SSV++F++K+ Sbjct: 3 NVLTEIDSQYPYMTKNEKKIAKFILNSPQKVIKMRSQDLASLLDISTSSVIRFSKKITDG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +S+ + P++ S I+N ++ ++ + KL T A+ N +++ Sbjct: 63 GFHDLKINISKYV---PKASS--IYNVELMNNESTESLRTKLHTRTTRALNHANNELNDK 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L+ + I + G GAS +VA + KL +IG N V++ H + + + Sbjct: 118 TIDQICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSN 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNS 239 D ++ I+ G + E+ + ++ IT N + Q ++ L Y +E + Sbjct: 178 DSVILITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMHM 237 Query: 240 ASISACHAQGMLTDLLF 256 + ++ AQ D+L+ Sbjct: 238 GATTSLFAQMFTIDILY 254 >UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUN7_9ACTO Length = 294 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 7/261 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR L +++++A+ +L P + QLA + S ++V +F + LG G+ Sbjct: 7 RIRGLVPTLTPAEQRVAEQVLADPLGTHRGTIGQLAERSRTSLTTVTRFCRALGMAGYQE 66 Query: 66 LKLAL-SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT---LNVNSEEK 121 L+ AL +EA + ++ I DDP++ V L+ + A+ T L++ E+ Sbjct: 67 LRFALATEAGEASSRDWTLGAAADIGPDDPMQSVLANLVATDVRALQETASQLDLAVAEQ 126 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + +T +ARR+ L + S V + +L ++G D+H LA+ P+D Sbjct: 127 LVDAIT---TARRVDLYAVSGSAAVTNDLQRRLHQLGITCHLWIDVHDALASATLLGPED 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E+ G A+T F +A+ A L T A E S S Sbjct: 184 VAIGISHSGETIEVIEPLTAARDAGAVTAAVTNFPRSAITSVAGLLLTTSAREATYRSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 +S H Q ++ D L + Q+ Sbjct: 244 LSGRHTQLLVIDCLVTGVAQR 264 >UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum A str. Hall RepID=A7G380_CLOBH Length = 179 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%) Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +EKL E V +++A I L G+GAS +VA +F +KL++I +D H LA + Sbjct: 14 DEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHIT 73 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ +AISY+G RE+NLA +E + G +AIT + L A L + E+ Sbjct: 74 NRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLR 133 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ L Sbjct: 134 IGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVL 176 >UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDH7_9FIRM Length = 281 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 140/285 (49%), Gaps = 24/285 (8%) Query: 9 QRYQG-LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 Q++QG L +S + +A+YL+ A++LS LA E V++++V +F + LG++G+ ++ Sbjct: 10 QQHQGDLTKSGRTVAEYLVQHAAEAQYLSISSLARECQVAEATVFRFCRALGFEGYHEMR 69 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMY-----ATLNVNSEEKL 122 +AL++A A+ V ++ Q +P + E+ +A++ T N S + + Sbjct: 70 IALAQANAT-----GVLVNQQ----EPAPDADTATLCEHASALFMTAINGTQNALSPQAV 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +L SAR++ G G S A+ + I AV D H + + D+ Sbjct: 121 DQAVALLHSARQVFCMGQGGSMAAAKEICARFACITNKFRAVADSHMQVMAASLMTEQDV 180 Query: 183 LLAISYTGVRRELNLAADEMLRV----GGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +L +SY+G R+L E LR G K++ IT + + + A L A+E + Sbjct: 181 VLFVSYSGATRDLM----ETLRTAKANGAKIILITHYEDSPGAKLADIVLLCGAQESPLD 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKKLV 282 S SI A + ++L + I D + E + R +EAL K++ Sbjct: 237 SGSIPIKVAVLYVAEVLVLRYILDDKPGSTEAQERTTEALAVKML 281 >UniRef50_C5EFX0 N-acetylmannosamine kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFX0_9FIRM Length = 290 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 6/224 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 R+ +Y L + KKLA+Y+L D S L+++ G++ S++ +F Q L Y GF Sbjct: 22 RLSSQYSFLPKQQKKLANYILNHQDEVIRSSITMLSHKTGIAASTITRFCQSLSYSGFSE 81 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 +K ++S+ + S + I+ D + ++ +KL+K ++ +T+ ++L E Sbjct: 82 MKFSMSKKVLSNNDEA------LIQKGDSINVIAKKLLKSSSECFASTMRTIDLKQLEEV 135 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + +L SA I + G +S A LM G A D + +P+D+ + Sbjct: 136 IHILMSAHNIHIYGQSSSYCSASYAQQMLMLSGLLGQAYNDTVNMNIVAHLLTPNDVAIG 195 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY 229 ++Y+G R +N A G K++ IT + + + A + LY Sbjct: 196 MAYSGESRNVNSALAIAKENGVKIVVITSAPYSTMAKLADYVLY 239 >UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=cellular organisms RepID=A9BXM8_DELAS Length = 323 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 10/215 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI LA +++++A +L P ++LA A VS+ +VV+F + +GY G Sbjct: 44 LDRITASLPSLAPAEQRVARLVLADPRAFARQPVRELAERAHVSKPTVVRFCRSMGYDGL 103 Query: 64 PALKLALSEALASQPESPSVP-IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 KL L+ ++ S VP IH + DD V K++ AA N S + Sbjct: 104 ADFKLKLAGSV-----SEGVPFIHRSVDTDDKTSDVMVKVVDNAVAAFLQYRNAASTTAI 158 Query: 123 HECV----TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + + ++ RRI G G SG+VAQ+ K ++G + A D H + + Sbjct: 159 EQAAQAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLG 218 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 P D + IS +G R+L AAD + G +AIT Sbjct: 219 PGDCAVIISNSGRTRDLMDAADIARKNGATTIAIT 253 >UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UGP6_SINMW Length = 284 Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 79/274 (28%), Positives = 138/274 (50%), Gaps = 32/274 (11%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 R+R L+ +++++A ++L D + S +A VS ++V++ + G++GF Sbjct: 15 RLRSVLPKLSDAERRVALWMLKNVDLSIRQSMSAIAQATDVSDTTVLRMCRTAGFEGFTD 74 Query: 66 LKLALS-------EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 LKLAL+ E + +PE+ ++ Q G +L + T A+ T V Sbjct: 75 LKLALAQEPREAIEHSSGEPEASAL----QAAG---------RLFRAITQALNDTFGVLD 121 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-----MHALLAT 173 E + + ++ +A+ I++ G+G SG+VAQ F + +++G A D MHA L Sbjct: 122 EATFAKALDLVANAKHIMVGGVGGSGIVAQAFYQRCIRLGLRCDAPIDSQLQIMHAAL-- 179 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 + P DL++AISY+G+ + L E G L ITG + +AL + A L +++ Sbjct: 180 ---TGPGDLVVAISYSGITSDPVLVLQEAKARGASTLCITGNSSSALARLADVVLVSVSH 236 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELA 267 EQ S ++A AQ L D L+ AL+ ++ E A Sbjct: 237 EQ--GSEPMAAQIAQMTLVDALYAALVARNPEPA 268 >UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=Streptomyces RepID=B5GNW3_STRCL Length = 354 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 3/259 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 ++R + +S +++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 71 KVRTLVPSMTRSMQRVAEAVADDPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYRD 130 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L+LAL+ A Q S + I DDPL V KL ++ + T L Sbjct: 131 LRLALAGLAAHQQSGRSPSVTADISVDDPLPDVVAKLARDEQQTLADTAATLDTAALAAA 190 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDDLLL 184 V+ +ARRI + G+GAS LV + A KL++IG A A D H A+ VQ + D+ + Sbjct: 191 VSAAATARRIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRT-GDVAV 249 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATNSASIS 243 AI+++G ++ G +AITG + Q A H L T + E A++S Sbjct: 250 AITHSGSTGDVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESELRPAAMS 309 Query: 244 ACHAQGMLTDLLFIALIQQ 262 + Q ++ D LFI + Q+ Sbjct: 310 SRTGQLLVVDCLFIGVAQR 328 >UniRef50_A5IPI4 Transcriptional regulator, RpiR family n=54 Tax=Staphylococcus RepID=A5IPI4_STAA9 Length = 266 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 27/260 (10%) Query: 9 QRYQGL-AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 QRYQ L ++DK++ +Y+ + + LA+ G S +++ +F+ KL Y+ F LK Sbjct: 8 QRYQHLFTKTDKRIVNYIRQNGYSDAFSTINSLAHAIGTSPATMTRFSHKLDYENFQDLK 67 Query: 68 LALSEALASQ--PESPSV----PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + SP + H QI ++ GE + + Sbjct: 68 FNIQQEMTETVIENSPIIQRIHKYHQQI-----IQQTGEFI---------------DNDI 107 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L+S+R I+ G+G+SGL A F ++++++G D H + + S D Sbjct: 108 IQTFIDKLQSSRHILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSD 167 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A+S +G EL AA+ G V+AIT F + L A L T + + T+ Sbjct: 168 MFIAMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDHQF 227 Query: 242 ISACHAQGMLTDLLFIALIQ 261 I+ A L D++ L++ Sbjct: 228 INTQIATLFLIDIVSYHLLE 247 >UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYQ0_EXISA Length = 267 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 18/227 (7%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I+ Y + S+KK+ADYL+ + A ++ LAN S ++ +F +K+G + + Sbjct: 4 QIKHVYSEMTGSEKKIADYLMANMNEAIEMNITDLANAIATSPGTITRFCKKIGVGSYSS 63 Query: 66 LKLALSEALASQ--PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL + + L P++ S+ +P++ +LI + TA + ++ +E L Sbjct: 64 LKLMMQKTLTETNLPQTTSL---------EPMQRSYIELI-QTTAHL-----IDQDELLA 108 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 C + S+R + L G+G +GLVAQ ++L ++G A D H+++ + +D++ Sbjct: 109 ICKE-ITSSRSVHLYGLGNAGLVAQEMEYRLRRMGLLATTAFDSHSMVMDASIVTSEDVV 167 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT 230 +A S +G RE+ A G +A G+ + L + + L T Sbjct: 168 IAFSNSGESREVVQAMQLAKESGCTTVAFVGYQHSPLAELVDYRLLT 214 >UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB20_PARDP Length = 280 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 2/211 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RIRQ +++++A+ +L P TA S A A VS+ S+++F ++L GF Sbjct: 16 LDRIRQSLASFTPAERRVAEAVLDTPSTAITWSISDAARIAKVSEPSIIRFCRRLDCDGF 75 Query: 64 PALKLALSEALASQPESPSVPIHNQIRG-DDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P +L L++ LA +P P+ G DDPL + + + + A+ L Sbjct: 76 PDFRLKLAQQLAKHQPAPQ-PLARPGSGNDDPLAAMVDDIFQRAGQAIEEARRDLDLGAL 134 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V ML ARR+ + G G+SG +A +L + A A D + + P DL Sbjct: 135 RAAVAMLGKARRVDIYGYGSSGFMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGPGDL 194 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L +S++G+ L + + G VLAI+ Sbjct: 195 LFVLSFSGLTSYLISNIEIARKAGAPVLAIS 225 >UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 Tax=Vibrio shilonii AK1 RepID=A6D304_9VIBR Length = 289 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 4/208 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR L ++++ +A+ L + S ++A VS + +VK ++KLG+ GF L Sbjct: 17 IRMMMPSLTKTEQSIAENFLQPHFLQKSTSINEVAERLSVSPALIVKVSKKLGFSGFKQL 76 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K E+L +Q E+ S ++ DD + K+++ + A+ LN + Sbjct: 77 K----ESLYAQSETQSYAPSERLLPDDSAEKIVSKVLQNSINALTEILNFVDVSMVDAAA 132 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 L AR I L +G S ++ ++F KL++IG ++ +D H +L + + D++L + Sbjct: 133 EALLKARNIELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMTDQDVVLVV 192 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITG 214 S++G +L A + + G V++IT Sbjct: 193 SHSGQTVDLMDAVRQAKQSGATVISITN 220 >UniRef50_Q9K8R3 BH2940 protein n=4 Tax=Bacillus RepID=Q9K8R3_BACHD Length = 284 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 7/211 (3%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI + +++S KK+A+YL+ PDTA L++ +LA A V +++V++FA LGY+G+P Sbjct: 9 RIMDLQEKMSKSQKKIANYLIQHPDTAPFLTASKLAKYAAVGEATVIRFAVFLGYEGYPD 68 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L+ L EAL + S V R D P + E+++ ++ A + ATL E+ + Sbjct: 69 LQRHLQEALQKKMTSAEVFARTTDREDRPSHAI-EEILTDDMANLRATLQQIELEEFEQA 127 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V + A+RI + ++ + Q + L + N V + + + DDL++ Sbjct: 128 VNSIIEAKRIYVIAYRSAASLGQFLTFYLDLVLQNTELVEQADGVSEHLLDITEDDLVIG 187 Query: 186 ISYTGVRRELNLAADEMLRV---GGKVLAIT 213 G R D + V G K + IT Sbjct: 188 F---GFARYTKRTVDVLKYVKQRGAKTIVIT 215 >UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI4_9GAMM Length = 278 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 6/200 (3%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 ++S K+A ++ P+ ++ LA +AGVS+ +V +F LGYKGFP KL+L+ L Sbjct: 15 SKSAHKIAACVVANPEAILASTTASLAAQAGVSEPTVNRFCTGLGYKGFPDFKLSLAAEL 74 Query: 75 A-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 A QP + I DD V K+ + A++ T + L + V + +AR Sbjct: 75 ARKQPR-----MTRDIDPDDSAAKVAAKIFESTQASLSNTQDHLDLAALQDVVAAMSNAR 129 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 I L G+GAS VA + KL++ A D+ DDLL+ ISYTG Sbjct: 130 SIALCGLGASASVALDAQHKLLRFPIPIMAHTDIINQRVVAAGLGADDLLICISYTGRTT 189 Query: 194 ELNLAADEMLRVGGKVLAIT 213 + A+ + G +V IT Sbjct: 190 AMIELAELAVSRGCQVAGIT 209 >UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MBA6_9FIRM Length = 286 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 12/260 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I YQ L +K++ADY+ PD ++ QLA +G S+++VV+ + LGY+ Sbjct: 6 NVLDSIDNLYQQLFSKEKQIADYIKDHPDEVVMMNVSQLAKASGTSEATVVRTCKHLGYQ 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEE 120 G+ L+L LS + ++ N I D V E L+ N S++ Sbjct: 66 GYYQLRLILSRDIGTKS--------NDIGIDADTDFVSYTF--ERNIQNLRNLSSNLSKD 115 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L +C +L A + + G + +A + +++L + G + + L V S + Sbjct: 116 VLLQCALILLKAPAVHIIATGNTTPIALDLSFRLSRFGVQSFSSSISEYYLNNVSLGSKE 175 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +++ AAD +G +++IT + + L + + H L + E N Sbjct: 176 DVVIAISGSGTSKQVLQAADIAKDIGMTIISITSDSDSPLARVSDHILSSSEEHPLFNET 235 Query: 241 SISACHAQGM-LTDLLFIAL 259 H M + D L A+ Sbjct: 236 KEPLSHLCSMAICDTLLYAV 255 >UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019054B9 Length = 259 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 12/203 (5%) Query: 19 KKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALAS-Q 77 +K+A ++L P T + S +LA EA S++SV++F ++LGY+GF KLAL+ LA+ Q Sbjct: 6 EKVAAFVLADPQTVLYKSITELAEEAESSEASVIRFCRELGYQGFQNFKLALAHELATLQ 65 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 + S P GD + ++L++ A+ T + + + ++L AR I + Sbjct: 66 QPTASAP------GD-----MVQELVETARTALEETERLLDRDAIQRVSSLLLDARHIEI 114 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 G+ AS + AQ +KL ++G A RD H +S DDL + IS +G + Sbjct: 115 FGVAASAITAQYLEYKLARLGIQAHIPRDSHLATMASATASADDLYILISSSGSTIDTLR 174 Query: 198 AADEMLRVGGKVLAITGFTPNAL 220 A+ G KV+AIT T + L Sbjct: 175 VAESAHARGAKVIAITNRTKSPL 197 >UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Gammaproteobacteria RepID=B8KWX3_9GAMM Length = 337 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 10/233 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 +N L I Q GL +S+ K+A +L PD A +S LA+ AGVS+ SV +F ++ G Sbjct: 51 INLLEDINQSLPGLNKSEVKVAQAILSDPDAATRMSIASLASRAGVSEPSVNRFCKRFGA 110 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFP KL L+ ++ S I + D + KL +A+ A Sbjct: 111 SGFPDFKLRLATSMVSGVRY----ISRAVEFSDDIDTYPGKLFDNAISALVAAKEQLPTG 166 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD--MHALLATVQASS 178 + V L ARRI G+G S V ++ K + +D M +LA A S Sbjct: 167 DIARAVDFLAQARRIHFFGLGTSAAVTKDAEHKFFRFNVPVTNHQDPLMQRMLAA--AGS 224 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 D+ IS+TG R L A+ + V+++T P + + S C T+ Sbjct: 225 VGDVFFIISHTGRTRALVEVAELARQTEATVVSLTA--PQSPLAQESDCAITL 275 >UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8A7_MACCJ Length = 285 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 124/253 (49%), Gaps = 5/253 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I + Y +K++AD ++ P+ +L +++A+ + S++++V+F+++LG G Sbjct: 7 QITKMYDSFTPVEKRIADVVIEYPEKVVNLPIKEIAHLSNTSEAAIVRFSKRLGLSGIKV 66 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 +K+ L+ L + + VP ++ D+ ++ EK+ A+Y T V S + + E Sbjct: 67 VKVELARELHTIADK-KVPTKIELTDDE--EVMKEKVFNNTIQALYNTEKVISAKVIDEA 123 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + SA+R+++ G+G S +VA + KLM I +A D+ + + + D+L Sbjct: 124 AQAITSAKRVMIFGVGNSRVVATDLHVKLMNIDQSAILATDLLSAITLLGHYEAGDVLFV 183 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATNSASISA 244 S T + + G K++ +T F+ A++ A L EE N ++ Sbjct: 184 TSETSKNKVITDICKYAKEKGIKIILLTQKFSSPAIRM-ADIVLAMAKEENEINLGYMTV 242 Query: 245 CHAQGMLTDLLFI 257 AQ + D+L++ Sbjct: 243 RTAQLTIVDVLYL 255 >UniRef50_C3WCJ9 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCJ9_FUSMR Length = 241 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 27/211 (12%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 LL+ R+ L +S+++L D++ + S+ +L EA SQ+++ + +KLG++G Sbjct: 10 NLLQTREIRISLTRSEEELMDFIEKNFKEIPNYSAIKLCEEAYSSQATLNRVCKKLGFRG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK ++ E L S + IHN I Y N+N EE + Sbjct: 70 FSELKFSIEEDLKLMENSKNSYIHNTI---------------------YYIDNINFEE-I 107 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L++ R+I+L G+GAS + A F +L+ +GF A + + + S D + Sbjct: 108 DNIIKILKNNRKILLYGLGASQITAAYFQRQLLYLGFQAIMISE-----EKMMESFDDFI 162 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 + IS +G + A M +G V+AIT Sbjct: 163 IFIISSSGETLRVKHIAKNMKELGRIVIAIT 193 >UniRef50_UPI000196B4B9 hypothetical protein CATMIT_00397 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4B9 Length = 290 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 18/269 (6%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + + S++++ADY+L + R SS+ +A++ ++ S + +F QKLG+ G+ L Sbjct: 10 KNMTSSEERIADYMLEKKTLLRKQSSRSIASQLFINPSMITRFCQKLGFHGYTDF---LE 66 Query: 72 EALAS--------QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 E L Q P+ P NQ D ++ K+ + + TL + S + L Sbjct: 67 EYLKEIEYTESHFQNLDPNHPFDNQ----DKNTVIANKIGQLYHEIVDDTLKLISHDALQ 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + L + I + G G VA+ F K++KIG N M+ L + Sbjct: 123 NAINCLNKSDIIYVYSAGVQGDVAETFKDKMLKIGKNVVLETKMNELYYRASYCPLNCTF 182 Query: 184 LAISYTG-VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + ISY+G + EL ++ +LAIT + N L Q A + L E+ ++ Sbjct: 183 IIISYSGEIETELR-GVKKLKERHIPLLAITSYGDNTLSQYADYILNVSTREKLKDNLGD 241 Query: 243 SACHAQGMLT-DLLFIALIQQDLELAPER 270 A + ML D+L++++ D ER Sbjct: 242 FAMNISTMLILDILYVSIFNTDYSTHVER 270 >UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment) n=3 Tax=Lactobacillus RepID=C2D3P4_LACBR Length = 281 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 3/251 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 ++Q + L++++KK+A Y++ P A + + LA S +SV + + LGY F Sbjct: 8 LKQSFDNLSRTNKKIAKYVIDNPQAASEANIEDLAAVTETSTASVSRLVKTLGYSNFREF 67 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 L+L+ +Q ++PI I +D L + +K+ + A+ T E + V Sbjct: 68 TLSLA---YTQLRPQNLPIFKDIDANDTLSTIADKIFTSSQRALQDTREGIDENEFARSV 124 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + RR+ G+G S + A + K ++ + D L DD + + Sbjct: 125 LRIIHCRRLGFFGLGGSSVAALDGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDDCAIVV 184 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G R+ A+ + R V+AIT + + L + + ++E S + + Sbjct: 185 SHSGKNRQTIKIAETLKRRKVPVIAITSYQDSPLVGHSDITFISSSDESNYRSEGMYSLL 244 Query: 247 AQGMLTDLLFI 257 AQ + D LF+ Sbjct: 245 AQLTIIDTLFM 255 >UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYS8_9CLOT Length = 282 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 4/275 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I Y L ++KK+ADYL+ P A +S +LA+ SQ+++++F +K+G KGF Sbjct: 10 QIFSTYDSLYDAEKKVADYLISHPSEAIEMSVSELASHCDASQATIIRFCKKIGCKGFHQ 69 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK+ L+ Q + I N+I D + + +I + + AT + + E+L E Sbjct: 70 LKIKLA---GEQRQQEEQVISNEIDIDQMDKSLNNIMISK-VEEIKATFHNFNPEELREI 125 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V ++ A I +G + +A + ++K ++G A + + A + D+ A Sbjct: 126 VDLIIHANLIEFAAMGDTIPIALDGSYKFNQLGLKAVSSTIWESQEAFSRTLRKGDVFFA 185 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G + L + + G +AIT + + L + H L T E + Sbjct: 186 ISASGASKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCDHVLLTATREHIFHDQVSFTR 245 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + D LF+ L + +H +++ ++ Sbjct: 246 MAAMSVIDTLFLLLFSTKWDSFENVAQHEQSVAEE 280 >UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK0_9FIRM Length = 364 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/265 (21%), Positives = 128/265 (48%), Gaps = 3/265 (1%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK--LALSEALA 75 +K + +Y++ P+ ++ + LA E S+S++ +F +K GY+GF +LK LA+ L Sbjct: 97 EKSIINYIINHPNEVIEMTMEDLARETYTSRSTISRFCKKNGYEGFNSLKMQLAIELNLF 156 Query: 76 SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRI 135 + E S +GD+ ++ + + ++T ++ T+ N E + + + + R + Sbjct: 157 LKDEMSSSTSLLFEKGDNASSII-DNITSQDTYSIIETVRTNPVEHIEKLADKILNCRHV 215 Query: 136 ILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRREL 195 + G+ SG++A + + ++G +L + P D+++ SY+G + Sbjct: 216 VFLGVQFSGIIAYDAHLRFSRLGIPCKYFNTECDILTYSYFADPQDVVIIFSYSGKTAVI 275 Query: 196 NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLL 255 AAD + G + ++T N L + + LY + + N+ S+S+ A L D++ Sbjct: 276 LEAADHIRGKGTFLASVTKNYNNELLEISDLHLYINSIDDPENNLSLSSRIAALCLVDMI 335 Query: 256 FIALIQQDLELAPERIRHSEALVKK 280 + L+ + + +++ + L KK Sbjct: 336 YAVLVNKKSDNFYDKLMQTNKLYKK 360 >UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Tax=Gammaproteobacteria RepID=HEXR_ECOLI Length = 289 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 4/195 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + + L++S++K+A+ +L PD A H S +A EA VS+ +V +F + + Sbjct: 1 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP KL L+++LA+ +P V + + DD + K+ + A + + + Sbjct: 61 RGFPDFKLHLAQSLANG--TPYV--NRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A++I G+G+S VA + K + D+ + S Sbjct: 117 AINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDG 176 Query: 181 DLLLAISYTGVRREL 195 D+++ IS+TG + L Sbjct: 177 DVVVLISHTGRTKNL 191 >UniRef50_Q38V38 Putative transcriptional regulator with a sugarisomerase domain, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38V38_LACSS Length = 276 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 125/260 (48%), Gaps = 13/260 (5%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I+Q+Y L+ ++K+A ++ + + + + +LA E VS S++ +F +K+G + F Sbjct: 7 IKQQYSFLSPQEQKVALAVIQKGASIQRIGIDELAAELQVSNSTISRFVRKIGCQNFVDF 66 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 KL SE P+ + Q+ + + + ++ A + + L + V Sbjct: 67 KLQFSEG----PQPTMTGVQGQVDHESQTSVEIYQFYQDVITKTQARIK---QADLDQLV 119 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + +++++++ + G+G+SG F +L ++G A V + H +L T + + DL++ + Sbjct: 120 SWIKTSQQLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRIINKTDLVIGL 179 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G E+N A G K AIT T + L + L+ E + AS + Sbjct: 180 SNSGNTEEVNQAVQNARENGAKTAAITSGTDSPLAAASDLTLFV---EDSIGFASARFVN 236 Query: 247 AQGMLT---DLLFIALIQQD 263 +Q LT D+L + L++ + Sbjct: 237 SQFALTYVIDILAMLLLEDE 256 >UniRef50_D1P280 Transcriptional regulator n=5 Tax=Enterobacteriaceae RepID=D1P280_9ENTR Length = 250 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 14/252 (5%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 +L + Y L S+KK+ YL +L+ +L + VS++ ++ +QKLG+ GF Sbjct: 1 MLDFLKNYDNLTVSEKKVLKYLTDNIADIPYLNINELVAKTFVSKTVIINLSQKLGFSGF 60 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK ++ + SQ N+ +P +K ++ N + +N EE++H Sbjct: 61 KELKFQINNHILSQ---------NKAEKKNPASY--KKQLENNIHKTFTLIN---EEQIH 106 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 +C LR +R I + G S V L +G + + D + + + + DD + Sbjct: 107 DCAKTLRHSRNIFIVARGTSKAVGYYLEHLLFSLGLHCFFINDYNLSDSFTRLVNKDDTV 166 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS +G +++ A + ++++T F N L +++ L+ A+ T Sbjct: 167 IFISLSGGTKKIIETAKIVQLKDANIISMTAFHTNELTAYSTNSLFCFADSYDTKRDDSK 226 Query: 244 ACHAQGMLTDLL 255 + +L DLL Sbjct: 227 SRTGFFILVDLL 238 >UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2J8J9_FRASC Length = 293 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 14/238 (5%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RIR L+ +++++A +L P H S +LA +G S ++VV+F Q LG +G+ Sbjct: 19 LERIRALSASLSSAEQRVARQVLADPVAMIHQSVSELAQVSGSSPATVVRFCQSLGLRGY 78 Query: 64 PALKLALSEALASQPESPSVPIHNQI-----RGDDPLRLVGEKLIKENTAAMYATLNVNS 118 LKLAL ++P+ Q+ D P + G+ L +A A ++ Sbjct: 79 QELKLALIR--------ETLPVERQLVDEVSAADGPDEIAGKVLGGAASALTEAARGIDG 130 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L ++ +A R + +G S +A + A++L +G +A D H T + + Sbjct: 131 G-VLAAIADLVVAAPRTLFVAVGTSAPLAMDAAYRLTTVGVDARFAGDAHVQHVTARMLA 189 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 DL +A+S+TG E A + G AIT F + L + H + + E A Sbjct: 190 AGDLCVAVSHTGSTAETLAAMRAAVDAGAHTAAITSFARSPLTELVRHAVVVGSRETA 247 >UniRef50_C9S176 Transcriptional regulator, RpiR family n=2 Tax=Geobacillus RepID=C9S176_GEOSY Length = 244 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 R+R L +D ++ DY++ + + Q++A +++V+FA+KLGYKGF Sbjct: 6 RVRLYADRLNDTDDQIVDYIMEHREEIADIPIQKMAEALYTVPNTIVRFAKKLGYKGFAE 65 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK AL AL + E+ ++ I + L+ E+LI+E KLHE Sbjct: 66 LKAAL--ALEQRAEAAALAGGTVI--EKTKELLDERLIEEAVG------------KLHE- 108 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 A+ + G+G S + A L +G A H +L D++ Sbjct: 109 ------AKHVFFYGVGDSAYFCEMMAKHLRCVGKRADFFVQRHDMLYNADRCGEKDVVFV 162 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 IS +G +++ A + G V+++T F PN+L A LY A +Q N ++ Sbjct: 163 ISASGETKQVLEAVAAAKQNGAFVISLTHFCPNSLADLADFRLYCWAPKQFLNKYDVT 220 >UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU Length = 312 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 14/277 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 LLR + + S+K +A Y+L ++S+ QLA S +++ + QKL YKG Sbjct: 2 SLLRKLEMAVDFSTSEKLIATYILKNGPDVLNMSTSQLAKATYTSPATITRLCQKLEYKG 61 Query: 63 FPALKLALSEALA-----SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 + K+ALS L + +P+ P + D + + + ++ T+N Sbjct: 62 YNDFKIALSAQLQYTFDRNSETNPNFPF----KKRDTIHTIKHSIATLAKDSINLTVNNI 117 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + L + + ML A+ I + G+ +A +F +K+ +IG N ++ L S Sbjct: 118 DNDILAKIIIMLDQAKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQS 177 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-- 235 + D + ISY+G E+ AA+ + R ++AIT F + L + + L+ + E+ Sbjct: 178 NKDHCAILISYSGETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIY 237 Query: 236 ---ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 +T ++IS ++ LF ++LEL E Sbjct: 238 SKVSTFGSTISIHIMLDIIYSCLFARHYDENLELKLE 274 >UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=A6UCC0_SINMW Length = 296 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 4/213 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L IR R L +SD+K+A+ +L P + + + A AGVSQ +V++F +G + Sbjct: 16 NILEVIRLRRADLRKSDRKVAELVLADPKRVINATIAEAAEWAGVSQPTVIRFCASIGCQ 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KL L+++LA + H+ I D V K+ ++ N + Sbjct: 76 GYQDFKLRLAQSLALGMSA----THSVIDASDTPAQVSAKIFDYTITSLDWVRNHLDPVQ 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L A RI G GASG+VA++ K G A D H + V P D Sbjct: 132 VSRAIDALSKASRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLKPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 + + IS TG + A G +V+ I G Sbjct: 192 VAVVISNTGATLAIIETARRARESGCQVIGIVG 224 >UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNS3_LACPJ Length = 292 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 5/276 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L IR Y L+ +D+K+ADY++ P S LA GVS ++V +F +++ + F Sbjct: 13 LTLIRSYYPNLSVTDRKIADYIIADPIKTAAQSISDLAAAVGVSTATVSRFVKRISFSSF 72 Query: 64 PALKLALSEALASQP-ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ A++P E + + + + E +++ T V +E L Sbjct: 73 RDFSRELT---AAEPIEQTNAEAFQDVEKQTTFKGIAESTFNSIRSSLDQTSQVMTEADL 129 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L +AR I G+G S + A + K ++ G A D L + D+ Sbjct: 130 KRAVELLLNARSIGFYGLGGSAVAALDGYHKFVRTGIPCAHNSDYDMQLMQAAQMNASDV 189 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG ++ + V+A+T F + L + ++ ++AEE S + Sbjct: 190 AVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTVAFISVAEEINYRSEGL 249 Query: 243 SACHAQGMLTDLLFI-ALIQQDLELAPERIRHSEAL 277 ++ AQ + D LF+ + ++E+A R EA+ Sbjct: 250 TSLIAQMSIIDSLFLMTAVHGNIEMAESLGRVREAI 285 >UniRef50_Q6M5C3 Transcriptional regulator, rpiR family n=3 Tax=Corynebacterium glutamicum RepID=Q6M5C3_CORGL Length = 293 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 10/220 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +RI L + +K+A+ +L+ + L++Q LA+ GV +++V++ AQ LGY GFP Sbjct: 15 IRITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVIRTAQSLGYDGFP 74 Query: 65 ALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVG--EKLIKENTAAMYATLNVNSEEK 121 L++AL++ LA +Q S S+ + G L+G + I + A++ + +E+ Sbjct: 75 QLRVALAQELALAQGASRSM-----VEGALSSSLLGHLQAGISDFQASLGTVASALTEDD 129 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L C+ L SARR+++ G S + +F+ +L +G +A D + + Sbjct: 130 LTRCIEGLDSARRVLVASHGLSAPLGLDFSQRLNSMGRSAEVHSDSMSEQIVARQLGEGS 189 Query: 182 LLLAISYTGVRRELNLAADEMLRVGG-KVLAITGFTPNAL 220 + AIS +G + LA E R GG ++A+T F +A+ Sbjct: 190 VCFAISGSGASKA-TLATIEAARAGGATIMAMTCFAHSAI 228 >UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FC5_PEDPA Length = 280 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/283 (21%), Positives = 138/283 (48%), Gaps = 17/283 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L + ++ ++S++K+A +++ P ++++++++ VS ++VV+ A+K+ Sbjct: 3 NILFTLSNDFEKFSRSEQKVARFMIDYPREVIQMNAEEISDRTQVSPATVVRLAKKICKS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK+ ++ + ++ ++ D L ++ KL + A+ T + + Sbjct: 63 GLPGLKIQVASEIKVDD-----SLYTEVNPSDDLDVMKHKLEFRISHAIGQTNQILLKND 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ A I + G+GAS LVA++F K ++IG + D H L V + P+ Sbjct: 118 VKKATDIVEQADDIYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTH--LMAVGLAKPNS 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGK----VLAITGFTPNALQQRASHCLY--TIAEEQ 235 +L+ +S +G +E + + RV ++AIT + + + ++ L E Sbjct: 176 VLIVVSDSGETKE----SCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESG 231 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +A+ ++ AQ + DLL+ A + QD R+ S+ ++ Sbjct: 232 VLRTAATTSLLAQLYVVDLLYYAYLTQDFSNNKARLVKSKTII 274 >UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F2FF2 Length = 285 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 17/282 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARH--LSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 I R L Q++ ++ Y ++ + R +S +LA+ V ++S+++F +KLGYKG Sbjct: 11 INTRINELTQTEIRI--YQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCKKLGYKGLS 68 Query: 65 ALKLAL------SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 LK L + L S+ S N + G + ++L N A+ TL + Sbjct: 69 ELKTTLRLETDTDDTLLSKVTSLDEQT-NSMTG------IAQQLANNNYFAINETLALQE 121 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E+ L L +A ++ GIG S + ++ M+I N A+ D H + Sbjct: 122 EQALVRAADYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNVG 181 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++AIS++G R++ A + G + I+ ++L Q A L T Sbjct: 182 KKDVVVAISHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPYQ 241 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S S + AQ + D+LF AL+ + E+I S ++ K Sbjct: 242 SDSSTITAAQSFMVDVLFNALLFINRGGNVEKIISSLDIINK 283 >UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU Length = 291 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 10/254 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + S+K +A Y+L + +LS ++LA + S +++V+ +KLG G+ K+ S Sbjct: 13 FSSSEKTIAKYILDNGEDILNLSVKELAKQTYTSPATIVRLCRKLGLNGYGDFKIKYSAE 72 Query: 74 LA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L + V ++ D + ++ + A+ TLN+ + L + + +L A Sbjct: 73 LQFDKKNKKRVDVNFPFGNTDSNSQIAYRIANLHQEAIEDTLNLVDFKNLDKIINLLDQA 132 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA----LLATVQASSPDDLLLAISY 188 RRI L G G S L +F K+M+IG +R HA L+ SPDD+ + ISY Sbjct: 133 RRIYLFGNGNSLLAGFDFQHKMMRIG-KMVEMR-AHAGEQGFLS--YTCSPDDVAILISY 188 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS-ASISACHA 247 +G E+ A + ++ +L IT N L + ++ + T + E+ + A S+ + Sbjct: 189 SGETNEMVELAKFLKKMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIFSKIAPYSSKTS 248 Query: 248 QGMLTDLLFIALIQ 261 L DL+F + + Sbjct: 249 ISYLLDLIFSCIFR 262 >UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI5_9CLOT Length = 294 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/270 (22%), Positives = 127/270 (47%), Gaps = 2/270 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 +L IR + Q + K +A+Y+L + + LA E+ VS+++V +F + +GY+ + Sbjct: 15 VLDIRSKMQDFNPAQKAVANYILNNFYDMEGMPIRDLAVESEVSEATVSRFVKAMGYENY 74 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 A +L ++++ A + + S+ + ++ +D + K+ + N A+ TL V + L Sbjct: 75 RAFQLEVTKSKAERRKG-SLKGYAEVTEEDNAPGICRKIFESNIQALQDTLTVIDYDALE 133 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 ++ ARR+ + G S + A + +L ++G D H P+D+ Sbjct: 134 RAADLIARARRLCIFAQGRSKVTANSIRLRLHRLGIEGTLYTDPHEQAIASSLMGPEDVA 193 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS G R + ++ G ++ +T + L++ A L T+ ++A + S Sbjct: 194 VGISTFGRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEADILLRTVNNDEADFGSEPS 253 Query: 244 -ACHAQGMLTDLLFIALIQQDLELAPERIR 272 A Q ++ D L++ + ++ A ER + Sbjct: 254 CASVTQMVMLDCLYMLVAKRMEGKAEERFK 283 >UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK55_BACSK Length = 268 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 97/191 (50%), Gaps = 23/191 (12%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +I+ Y L+ ++K++ADY++ P+ ++ + LA + VS +++ +F +K+G F Sbjct: 5 LQQIQVNYHALSAAEKRIADYVMSAPEELANIHIKDLAAKCSVSVATITRFCRKVGAANF 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE---- 119 K+++ +++ ++ E G +LI E + A + + E Sbjct: 65 VEFKMSVRDSIRTEEE-------------------GGELIAEMESIYKAIIGGSRELINQ 105 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + T+L +A RI + GIG+SGL Q ++LM++G D H ++ + Sbjct: 106 DDIVQAATLLENANRIEIYGIGSSGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTA 165 Query: 180 DDLLLAISYTG 190 D++LAIS +G Sbjct: 166 ADVVLAISNSG 176 >UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0W4_ERYRH Length = 285 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 17/284 (5%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI+ Q L+ ++ K+A Y+L P L+ +L+ S S++ +F +K+ +GF Sbjct: 6 RIKNSTQ-LSDTESKIAQYILENPQLVTQLTIHELSEITYASASTITRFCRKMKTEGFSD 64 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRL------VGEKLIKENTAAMYATLNVNSE 119 K+ L+ L+S + N+IR D P + + + ++ N +M T N Sbjct: 65 FKVKLAGELSSFSIT-----ENRIRDDVPFQSNHTSTEIVQSILSLNYQSMSDTYNNIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF--NAAAVRDMHALLATVQAS 177 E+L + A I L G G S ++AQ+F +KL +I N +L A Q Sbjct: 120 EQLERIAHKIYYAPHIYLYGSGQSLILAQDFQYKLFRIELDCNLETSLGFQSLKANTQP- 178 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-A 236 D + L ISY G D ++ + ITG N L AS ++ +E+ Sbjct: 179 -LDSIALIISYYGQNEHNKTIVDSLVERNIPYILITGPLNNPLCTHASEVVHVSPQEELV 237 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 T AS S+ + ++ D ++ + D E + I +KK Sbjct: 238 TKMASFSSRTSMQLVLDFIYALIFAIDYEKNQKIIEKHPWYIKK 281 >UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae RepID=D1BBP1_SANKS Length = 290 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 32/228 (14%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +RI L +++++ D +L A ++Q++A+ AGV++SSV++ Q+LGY+G+P Sbjct: 18 VRIATVRNTLQPTERRVVDLVLDDVAGAVEATAQEIADRAGVARSSVIRTCQRLGYRGYP 77 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL----NVNSEE 120 L++AL+ LAS E PS P VG ++ + ++ ATL +V ++ Sbjct: 78 QLRVALARELASGAE-PST---------HPDTAVGR--VRTHVESLAATLPQITSVLDDD 125 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 ++ VT+ A R+++TG G S +A + A +L +G V D + +A Q +S Sbjct: 126 QVERAVTLCVGAGRVLVTGNGLSSPLAADLALRLTAVGRPTECVADPIGQQIAAAQLTSA 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRV-------GGKVLAITGFTPNAL 220 DL L +S +G A++ LRV G V+ +T F + L Sbjct: 186 -DLCLVVSGSG-------ASESSLRVARAGRAAGVTVVVLTSFVESPL 225 >UniRef50_Q2J952 Transcriptional regulator, RpiR family n=3 Tax=Frankia RepID=Q2J952_FRASC Length = 319 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 9/239 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR GL S++++A+ L +P S+ QLA AG S ++VV+ Q LG++GF Sbjct: 24 IRAALPGLLPSEQRVAEVCLARPGDVVEWSAAQLAEAAGTSTATVVRACQHLGFRGFQHF 83 Query: 67 KLALSEALASQPESPSVPIHNQI-RGD--DPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++ L+ ES + + +I R D DP+ + + + TA + L +L Sbjct: 84 RVELAR------ESGAAALRGEIGRTDAADPVERLVDTVFGAATAVLADALGPLDRSRLA 137 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V +L A R+++ G G S VAQ+ A + + +G A A D A T + +P D+ Sbjct: 138 PAVDLLDRADRLLVIGNGGSAPVAQDAALRFLGMGRPAEAPGDSIAQELTARLLAPSDVC 197 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L I+ +G AA+ G V+ IT +T L + A L A + +S I Sbjct: 198 LVITSSGANEPSLRAAEAARTAGAAVIGITSYTAGPLAEIADISLVVGAPDWPISSDMI 256 >UniRef50_A4NYS2 N-acetylneuraminate lyase n=2 Tax=Haemophilus influenzae RepID=A4NYS2_HAEIN Length = 148 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 71/135 (52%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRII 136 L E V +L+ ARRI Sbjct: 126 LEEVVKVLKKARRIF 140 >UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X566_COMTE Length = 282 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 10/206 (4%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L ++K++ ++ P +S+ ++A+E VSQ +VV+F + LGY G K L Sbjct: 12 LTPAEKRVGKLVIENPRRFASMSTSEIASECFVSQPTVVRFCKGLGYGGLTQFKQKLR-- 69 Query: 74 LASQPESPSVP-IHNQIRGDDPLRLVGEKLIKENTA--AMYATL--NVNSEEKLHECVTM 128 S VP +H+ + D V K++ + A A++ T ++ E + Sbjct: 70 ---GDRSDGVPYVHSSVDAGDTSFNVALKVVDSSIATLALFRTYVPKISIERASNTLAAA 126 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 R + G G SG+VAQ+ + ++GFN+ A+ D ++ + + D+++A+S Sbjct: 127 YSEQRSLSFYGSGHSGVVAQDAQLRFSRLGFNSTALNDGYSQVLNAASRKEGDVVVALSC 186 Query: 189 TGVRRELNLAADEMLRVGGKVLAITG 214 +G +EL + D R G V+A+TG Sbjct: 187 SGRTKELLESVDVAKRQGATVIAVTG 212 >UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteobacteria RepID=Q7MD38_VIBVY Length = 278 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 13/268 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+R+R + ++ + +ADY+L + + LA S+++VV+ + +GYK Sbjct: 6 NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ L SQ ES N I GD + + + ++ T + + Sbjct: 66 GYSDFRMALAVDL-SQTESRQ---QNHIEGD-----ICDVSAQSAVDSLQDTAKLIDRKS 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A I G+GAS +V + A++L++IG A D H + SS D Sbjct: 117 LARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQGD 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L A+S +G +E+ AA + V+++T + L ++ L E + Sbjct: 177 LWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGPLTGGA 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPE 269 ++ +L D+L +L LE PE Sbjct: 237 FASKVGALLLVDVLVNSL----LESYPE 260 >UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAG5_FUSMR Length = 283 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/229 (21%), Positives = 115/229 (50%), Gaps = 9/229 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L + Q + +++K+A ++L ++ + ++ + G S +S+ +F +K+G++ F Sbjct: 7 LFLLDQLLPSFSPAEQKIALFILENTFAVIDMTIEDMSEKIGTSVASISRFTKKIGFENF 66 Query: 64 PALKLALS-EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 LKL ++ E + S ++ S+ ++ D + + K N+A + ++ + +K+ Sbjct: 67 YLLKLGIAKEFVNSSNKTISLNVNKNSNATD----IYTNVAKTNSAILEESIEYFNTDKM 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-- 180 E ++ +A I L +GASG++A+ +K +++G + + D H+ L +QAS D Sbjct: 123 EEISEIILNANHIYLFAMGASGILAKESWYKFIRLGLKCSMIEDFHSQL--LQASILDDT 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY 229 D+ L S++G+ +++ + + + IT + Q CL+ Sbjct: 181 DVALIFSHSGINKDVLTLLEIINETPAYSIGITNYARTPFSQSVDICLF 229 >UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSK7_9FIRM Length = 282 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 6/259 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR R L +++K+A+Y+L D + + +LA A VS +SVV+F + LGYKG+ Sbjct: 10 IRGRMNYLTNTERKIANYVLENYDQVLNSNITELAENAKVSDASVVRFCRSLGYKGYQDF 69 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ ++ + + + + PI + D P ++ K+ + + TL + ++ + Sbjct: 70 KINAAKDVLPREKHLN-PILEE--SDSP-DMICHKIFNLEISVLERTLASLNMREVEKAA 125 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + +R++ G G S LV Q+ K MKIG D L + D+++ I Sbjct: 126 QFIFHGKRVLFFGSGGSLLVGQDALHKFMKIGVQVYVHEDRDLQLMASSLAGEGDVVIGI 185 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G + G + +A+ L + A + T +EE S S+S Sbjct: 186 SHSGSNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIADVVIDTASEETIFQSESVSTRI 245 Query: 247 AQGMLTDLL--FIALIQQD 263 AQ + D L +A + D Sbjct: 246 AQLAIIDSLVSIVAFMNYD 264 >UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1J5_9FIRM Length = 282 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 14/189 (7%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + L +S+KK+A+Y+L P+ + +LA G S +S+V+F + G KG+ Sbjct: 10 IEDKLGTLTKSEKKIAEYILEHPNRVVDATITELAERIGTSDASIVRFCKLFGCKGYQNF 69 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ L+ + + +V + D + +K+ A ++ TL + + E L Sbjct: 70 KIRLAREVVPHYKQLNVALEQH----DTALTICQKIFNTEIATLHETLEMLNVEHLQTMA 125 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-----D 181 +R A I + G G S +VAQ+ K +K+G + D A +QA S D Sbjct: 126 QRIREADYIEVFGSGGSSVVAQDIRHKFLKVGIRCTVLLD-----ADIQAMSASLLKKGD 180 Query: 182 LLLAISYTG 190 + + IS+TG Sbjct: 181 VAIGISHTG 189 >UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTD9_9FIRM Length = 282 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 19/230 (8%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I++ Y G++ S KK+A+YLL D A L++++L GVS+++V++FA L YKG+P L Sbjct: 9 IQEHYHGMSASHKKIAEYLLDHYDKAVFLTAKELGQTLGVSEATVIRFAVALNYKGYPEL 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRL--------VGEKLIKENTAAMYATLNVNS 118 + AL + + N+I + LRL + K + + + + T+ + Sbjct: 69 QQALQDM-----------VKNKITTVERLRLALLDGQTNLPHKALSTDISNIQLTMEEVT 117 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + V + AR I + + ++ + + L + N+ + + ++ + Sbjct: 118 SADFEKAVNEIIQARNIYIVSLRSATALGYFLHFYLQLLLQNSRLIHGVGTFFEEIRPAG 177 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL 228 P DL++ IS+ R+ G +VLAIT + L + H L Sbjct: 178 PGDLVIGISFPRYTRQTVEGLKYARENGARVLAITDSLTSPLAPYSHHVL 227 >UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C459_LISGR Length = 284 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 122/263 (46%), Gaps = 17/263 (6%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 ++K +ADY+L L+ Q+LA + S +S+++F +KLG GF + K+ L + Sbjct: 11 NFTNTEKVIADYILANTANMEQLTIQELARKTYTSHASIIRFTRKLGLDGFKSFKIELLK 70 Query: 73 ALASQPE-------SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 +Q E +P++P + DD + + ++++ + + ++ E+KL + Sbjct: 71 --TNQQENHVLSEINPNIPFEH----DDSILKISREMMELTQQTITESYHLLDEQKLFQA 124 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 L A+RI L +G S + A++F KL KI A D + +D L Sbjct: 125 TRQLYDAKRIFLFALGDSQIRAESFQNKLWKINQYAILATDRSEWAVHTANITSEDCALF 184 Query: 186 ISYTGVRRELNLAADEMLRVGG-KVLAITGFTPNALQQRASHCLY--TIAEEQATNSASI 242 ISY + ++ A E L+ G ++ +T + L + A C+ + ++ A+ Sbjct: 185 ISYDA-KSPHDITAAEWLKSRGVPIILLTSHITSKLSKIADICIAVPNLEDKSELKIATF 243 Query: 243 SACHAQGMLTDLLFIALIQQDLE 265 ++ A + +++F L Q D E Sbjct: 244 ASQIAFDYILNVIFSTLYQIDYE 266 >UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8QBF9_9ENTR Length = 297 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/286 (21%), Positives = 126/286 (44%), Gaps = 41/286 (14%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L + ++ +A ++ P+T +S +A+ VS +S+ K A+KLG+ GF LK+ + + Sbjct: 25 LGRKERSIARFIDDNPETLASMSITDIADYLDVSVASITKVAKKLGFTGFHDLKMNIGKH 84 Query: 74 LASQPESPSVP----------------IHNQIRG-DDPLRLVGEKLIKENTAAMYATLNV 116 + E VP ++N I D L+ + ++K + AA++ + Sbjct: 85 ITVSEELIDVPPVSGGEFYTEKIVESTLYNSILALQDALKAIDIAVVK-SVAALFIHRSE 143 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 N+ RI++ G G SG + ++F KL+KIG ++ D H L T Sbjct: 144 NA---------------RIVIAGCGGSGSICEDFNHKLLKIGIFSSVFSDSHKQLMTASL 188 Query: 177 SSPDDLLLAISYTGVRREL----NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 P D+LL +S++G ++ +A D+ G + + +T + + L + H + + Sbjct: 189 MRPGDILLTVSHSGQTTDIINMTKMANDK----GAETICLTNYPNSPLSHISRHAIISSV 244 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + + D +F + + E + E + ++ V Sbjct: 245 KNNPITGENATTRIVHLNILDAIFTIIASKTSEFSQESLHNTRNAV 290 >UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY6_HAHCH Length = 285 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 108/208 (51%), Gaps = 6/208 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +RQ L +S++K+A+ +L P+ H+ LA EAGVS+ ++V+F + + + F + Sbjct: 11 LRQNRDTLRKSEQKVAECVLRNPNDVIHMRIVDLATEAGVSEPTIVRFCRTICFDSFQSF 70 Query: 67 KLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K++L++ LAS Q ++P + R D L+ +G K+ + +++ N + +++ + Sbjct: 71 KVSLAQQLASMQRQTPF-----RARSGDSLQQLGAKIFSDVQSSLQQVFNQLAWDRIEQA 125 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + ++ R+ G GAS VA + K ++ + A D + +D+++A Sbjct: 126 CAWISNSPRLYFFGYGASAAVAADAQQKFFRLKPSTHACPDPDTQMLIAGLVETNDVIIA 185 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAIT 213 IS++G L + + G KV+AI+ Sbjct: 186 ISHSGRTNNLIQSCMQARASGAKVVAIS 213 >UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q61_LACBA Length = 286 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 1/255 (0%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +IR Y L++++KK+A L P ++ ++LA+ GVS +++ +F +++ Y + Sbjct: 8 KIRGTYDQLSRTEKKVAQMALNTPAVVSEMTIKELASATGVSTATISRFVKRMDYANYRE 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 +AL+ LA + ++ D L + K +++ AT SE+ L Sbjct: 68 FTMALAH-LAIEDGGEHQSSFPELAEGDSLATIANKTFHYTISSLEATNEALSEKDLARA 126 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V L +A ++ G+G S + A + K ++ + D L S D + Sbjct: 127 VLKLINAEKVTFFGLGGSSIAALDGYHKFLRTALSVTYYPDFDIQLMQAARLSDQDCAVV 186 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++G E +E+ R ++AIT ++ + L Q A ++ +E S + + Sbjct: 187 ISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAADVTFLSLTDEVNYRSEGMYSL 246 Query: 246 HAQGMLTDLLFIALI 260 +Q + D LF+ + Sbjct: 247 ISQLAILDTLFMMTV 261 >UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=Lactobacillus crispatus RepID=C2KD15_9LACO Length = 279 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 7/224 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ R L Q ++K+A ++L P + + QLA+ VS +++ +FA+++ Sbjct: 1 MTFLTDLQNRLPDLPQQERKIALFILQDPQFIQSANINQLASTIKVSNATITRFARRVNC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ L+ A AS N I D + ++ + T N + Sbjct: 61 SSFTDLKVKLAAAAASSQV-------NTITNQDNSKTTAHQVYDFYNRVLSETQNKLDIK 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +++SA+R+ GIG+SG + +L+++G +A A + + + T S D Sbjct: 114 QLKKIIQLIKSAKRVYFYGIGSSGYTSLEATQRLLRMGISAFAETESNNMFMTSSIISKD 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA 224 DL++AIS TG L A + + V+A+T + + L Q A Sbjct: 174 DLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLA 217 >UniRef50_UPI0001BC58DB RpiR family transcriptional regulator n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC58DB Length = 283 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/276 (22%), Positives = 125/276 (45%), Gaps = 26/276 (9%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN L + ++ Y L + +KK+A+Y + P LS+ +L E GVS +S+++F++ LG Sbjct: 1 MNKLNQFYKEHYNTLTKGEKKIAEYFVKNPKKVMMLSALELGKEIGVSDASILRFSKALG 60 Query: 60 YKGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPL--RLVGEKLIKENTAAMYATLNV 116 ++ F LK ++ ++ P V + + + ++V L EN ++ Sbjct: 61 FQKFSDLKNYIASGFSTITPNDRMVKNWDNFHSQNDIVNKIVNSDL--ENIKEFLLHIDF 118 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQ 175 E++ V + A++I GIG+S ++Q W + ++GFN + + L Sbjct: 119 ---EQIETVVNWMNKAKKIYFLGIGSSRAISQFMFWHMKRLGFNTECINEGGLGLYEAFS 175 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRV------GGKVLAITGFTPNALQQRASHCLY 229 + D+++ S+ R LN DE+ + G K++ +T + + + L Sbjct: 176 HITKKDIVMLFSFP---RFLN---DEVKSITLAKEQGAKIITVTSNPFSEISFLSDMVLE 229 Query: 230 TIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 T E N ++ L +++ A+ +++ E Sbjct: 230 TFVE----NDGFFNSYMVPMELCNIMLTAIFEKNKE 261 >UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YGT9_MOBAS Length = 305 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 7/219 (3%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 R+RQ + ++D+ +AD LL D A S + +A AGVS+ SV++FA+ +G +GF Sbjct: 21 RMRQELPAMKRADRAVADALLENIDAATRSSVKAVAGRAGVSEPSVIRFARHMGCEGFSD 80 Query: 66 LKLALSEALASQPESPSVPI-HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 K+ L++ A S H G D V + + + A+ + L Sbjct: 81 FKIRLAQDYAIGRMYLSADYQHPAKTGSD----VAGHVYEATSQALASAFAQRDPAALDR 136 Query: 125 CVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 ++ +RR+ G+G S VA +L ++ A+A D + T + DD+ Sbjct: 137 AADLIDGSRRVFCFGVGGSSANVAAEAENRLFRLDLAASATADAYKQRITAATAGKDDVF 196 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAI-TGFTPNALQ 221 L S TG R L +A + G ++A+ T TP A++ Sbjct: 197 LMFSVTGRPRSLIESARSAKQCGASIIAVTTAGTPLAIE 235 >UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VMT8_LACPJ Length = 282 Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 16/279 (5%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL-GYKG 62 L I R + +++++K+ Y+L + +S+ +LA GVS ++V +F + L G Sbjct: 5 LFTIHNRLENFSKAEQKIGRYILDHTNAVIKMSTAELAAATGVSTATVARFGKTLIPDGG 64 Query: 63 FPALKLALS-EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 +PALKL LS E+ Q ++++I D L + KL T + T + Sbjct: 65 YPALKLRLSAESTVDQT------LYDEINPKDSLDAIKSKLALRITHTIDETNRSLDDAA 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++ + + G+GAS +VA +F K ++IG +D H L + + Sbjct: 119 LQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQDPHLLAVGMTTQRQNV 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNS 239 +LL IS +G + E A+ + V+ ++ + L + A L E Q + Sbjct: 179 VLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEENQTARA 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A+ ++ AQ + DLL+ I D E RH + LV Sbjct: 239 AATTSLMAQLYVVDLLYYTFITNDYE------RHIKQLV 271 >UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RM35_9MOLU Length = 284 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 1/219 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + ++ L Y+L + ++S+++LA S +S+V+F +KL Y+G+ K+AL+ Sbjct: 3 NNFSSVERILGKYVLENGEKVLNMSTKELAKATFTSPASIVRFCRKLEYEGYNDFKIALA 62 Query: 72 EAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L S+ + + + +G D + V + + ++ T+ E+L V M+ Sbjct: 63 AQLQYSRLSNDDINANYPFKGTDSVYTVASNIANLSKESIDITMKNLDLEELRLVVLMIT 122 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A+ I + G+ +A +F +K+ +IG + + ++ L S+ + L + ISY+G Sbjct: 123 KAKVIDIYGVSGPLRIASDFQYKMFRIGKDVRISQMINEQLFQAAQSTSEHLAILISYSG 182 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY 229 E+ AA + R +AIT F N L + LY Sbjct: 183 ETEEVIEAAKILYRRKIPAIAITSFGENRLVKYTQRVLY 221 >UniRef50_B5RKH7 Transcriptional regulator, RpiR family n=2 Tax=Proteobacteria RepID=B5RKH7_KLEP3 Length = 294 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 5/185 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I R LA S+ K+ D LL+ P ++ Q+A AGVS +V++ A+ +G+ GF L Sbjct: 23 IHARSGDLAASEAKVVDLLLVDPLFVGTSTAAQVATRAGVSPPTVIRAARAIGFTGFTEL 82 Query: 67 KLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K+ ++ A + Q +P + D L V E I+ A+ A L E Sbjct: 83 KIEIARARGTAQFFAP----PEVLTADATLASVLETSIRAGVDALTALSGAIEISALDEA 138 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V ++RSAR++ G G S VA + ++L G +++D + + + P D+++ Sbjct: 139 VDLIRSARQVFAFGAGPSATVAADAVFRLRTAGVITVSIQDYLSAMIAARLLGPGDVIIV 198 Query: 186 ISYTG 190 +S TG Sbjct: 199 VSSTG 203 >UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=Q71W74_LISMF Length = 283 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 12/271 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L++IR+ L S+K+LA+Y+L P ++LA A VS +++ + KLG Sbjct: 1 MNILIKIREL-TNLTNSEKELANYILANPKKTLQCKPKELATAAFVSAATIYRLINKLGL 59 Query: 61 KGFPALKLALSEALASQPESPSV----PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 G LK+ ++ +L E + PI + D P +++ L + + TLN Sbjct: 60 NGIGELKIEIASSLRETNEEKDLNYDYPI---LESDTPYQIMT-NLNQIYKGTIDETLNN 115 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 E+L + L A+ I + A+ AQNF +++ +IG + + + Sbjct: 116 ADPEELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAAN 175 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 S + + + +SY G R L + ++ IT N L + A+H +Y + E Sbjct: 176 SDENHIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENH 235 Query: 237 TNSASISACHAQGMLT--DLLFIALIQQDLE 265 N S S Q +L+ D L+ Q+ E Sbjct: 236 YNKVS-SFSTRQSLLSIFDTLYSIYFNQNYE 265 >UniRef50_B0NJ36 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJ36_EUBSP Length = 277 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 109/227 (48%), Gaps = 18/227 (7%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I++ Y+ + +++K+AD +L P+ + ++LA +GVS+++VV+ Q GY G+ Sbjct: 10 IQKHYREFSPTERKVADCVLRHPNQVTEYTVKELAMASGVSEATVVRMCQHAGYTGYWPF 69 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL--NVNSE---EK 121 + L+ + R +D +V K YA + N++S+ + Sbjct: 70 RTMLARDMGMMGREEK-------RDNDQANIVAGIFRK------YADIMQNLSSKIDLDA 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + C ++ + + + G +G +A++ + L +IG A L T+ + +D Sbjct: 117 MSTCARLIDNCHEVHVIAAGDTGTLAKHMGFCLGRIGIKATYSGLADYYLNTINLADEND 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL 228 +L+AIS +G+ + + A+ G KV+AIT + + L + A H L Sbjct: 177 VLIAISKSGITKTVIQGAELAKEKGLKVIAITEYGNSKLGELADHVL 223 >UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillales RepID=Q02YU6_LACLS Length = 273 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 18/232 (7%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I+++Y+ L +S+KK+A+Y+L + + + + V +++V+F QKLGY GF L Sbjct: 7 IKEKYELLTKSEKKIANYVLASKERIVYGTMNDIKKAIKVGDATIVRFCQKLGYSGFSDL 66 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE----EKL 122 K+ +++ SQ S R D L EN ++ L+ E+ Sbjct: 67 KIEVAKESYSQKSSN--------RTDLTL------FFDENENSIIEILHETKSKLDLEQF 112 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + ++ A I + G+G SG A++ ++IG A+ H L T DL Sbjct: 113 EKSSKLISEASAIYIFGVGLSGNTAKDLEAMFLRIGVPVKAISGSHFQLQTAALLKKTDL 172 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++ IS +G EL + +++ IT + L Q + L T+ EE Sbjct: 173 IIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQTVNEE 224 >UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU66_9CLOT Length = 285 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 14/286 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+ IR Y L + +KK+ADY+L P ++ +L+N GV ++V +F + + Sbjct: 5 NLLISIRSCYDRLTRLEKKVADYVLQHPQEVVKMTINELSNSCGVGDTTVFRFCRSMNVG 64 Query: 62 GFPALKLAL------SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 G+ KLAL ++ L S+ E H+ L + +++ T A+ TL+ Sbjct: 65 GYQDFKLALALSSNVNDMLDSKGEFNLAQSHD-------LHELAQQVSGVFTDAVNETLS 117 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 + + V + +AR + L G G SG+ A ++M+I N D+H L + Sbjct: 118 SLDYDAISRTVEAILNARSVHLFGFGNSGVSALMMQNRMMRILPNIFYTSDVHMQLTSAA 177 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 D + + +G+ ++ A G + IT F A L + A E Sbjct: 178 TMQEDSVAIIFCNSGITKDSIRIAQMTHEAGAFTVFITKFMQTPAAPYADVLLCSGATEG 237 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKK 280 SIS +Q + LL+ L ++ A E +I+ + A+ +K Sbjct: 238 PIQGGSISGVASQMYIVMLLYSELFRRMETRAQENKIKAAHAIAEK 283 >UniRef50_UPI0000D541FA probable transcriptional regulator n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D541FA Length = 207 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 105/209 (50%), Gaps = 10/209 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L +I+ L +S++K+ +++L P + + + + ++ G+S+ ++++F + +G+ GF Sbjct: 6 LRQIKNSLSDLRKSEQKVGEFILNDPKSVITMKTAEASSAMGISEPTLIRFCKAIGFTGF 65 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS---EE 120 LK+ LS+ LA+ + +I DD + + EK+ + + + LNV S ++ Sbjct: 66 QDLKINLSQQLAAD----DYFVMYEINEDDSIHELCEKVFDTSISEI---LNVRSQIDQD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + L +A+R+ G S VA + K ++ ++ + D H + + D Sbjct: 119 ILENAIETLVNAKRVEFYAFGGSAPVAMDGQHKFFRLKIPSSYISDPHLQFMSANSLERD 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKV 209 D+++AIS +G L + + + G KV Sbjct: 179 DVVVAISQSGTTTALIESVKIVRKNGAKV 207 >UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=A0JVW9_ARTS2 Length = 309 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/285 (23%), Positives = 132/285 (46%), Gaps = 15/285 (5%) Query: 2 NGLL-RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 GLL RI R L S +++A+ +L P+ A+ ++ +LA AGV +S+V +F ++LG Sbjct: 8 GGLLHRISGRLPYLPPSLRQVAEAVLKSPEQAQTMTISELAVAAGVGESTVSRFVKELGI 67 Query: 61 KGFPALKLALSE-------ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT 113 G+ ++ L L+E A +++ V RGD + G K+ + + ++ T Sbjct: 68 DGYKSMLLGLAEATFISKAATSARTADSEVVYEGVNRGDTAAEIAG-KVERSSVQSLRRT 126 Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD--MHALL 171 E + V ++ ++ +I + +G+S + A+ + + G RD + +L Sbjct: 127 GQRQDVEAIQRAVDLIDASNTVIFSCMGSSSIAAEEAVMRFTRAGKKCMLYRDTTIQVML 186 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-- 229 A + P DLL+ IS +G + A + G +AITG + L+ A LY Sbjct: 187 AAI--IEPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLRNYADVVLYTA 244 Query: 230 TIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 T+ S+++ Q ++ D+L+ + + E ++ + Sbjct: 245 TVPSGGELYGESVTSKWGQLLVIDILYATYASRHYDATVEHLKQT 289 >UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6N7_9ACTN Length = 301 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/271 (22%), Positives = 129/271 (47%), Gaps = 8/271 (2%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 +QG ++S++++ DY+L A L++ QL+ A S+++V +F +KLG+ F + + +L Sbjct: 31 HQGYSESEQRIVDYILEHQSEAPRLTAAQLSRAAATSEATVSRFCRKLGFGSFRSFQFSL 90 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + L SQ + +++ D+ + + ++ + + AT++ + L V L+ Sbjct: 91 ARDLESQRNE---GLTDEVSLDN-MEQSLKNILAAKVSELNATIDGIDHDTLAAVVHALK 146 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A I +G + VA + +K ++G A + P D+++ IS +G Sbjct: 147 HAGVIEFAAVGNTNAVALDATFKFSQLGLRCMASTISETSIGFALTLRPGDVIVLISNSG 206 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQ 248 R LN A G V+ I+ + + L + A + T+ E T + S A Sbjct: 207 KSRRLNRMAKAARNCGATVVVISSDSKSPLARLADYTFNTVNHEALLTTGDFAFSKISAT 266 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVK 279 M+ ++++ L+ + ++ A E I + E L++ Sbjct: 267 -MIIEVIYNFLLPE-IKDAREHISYYEELIQ 295 >UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=Firmicutes RepID=B1R0U2_CLOBU Length = 284 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 20/238 (8%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I Y +++KK+ADY+L ++ +LA AG S ++V +F +K KGF L Sbjct: 11 IYAEYNSFFEAEKKIADYILKYGTKLIEMTISELAEAAGTSDATVTRFCRKCNMKGFHHL 70 Query: 67 KLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKEN--------TAAMYATLNVN 117 K+ L++ L+ SQ E V GD V E+ IKE+ M T+ Sbjct: 71 KITLAKELSESQKEDTRVS------GD-----VSEENIKESLNNILFNKIEEMKQTILTI 119 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +EEK E + +LR+A + +G + VA + +K ++G + A +A Sbjct: 120 NEEKFKEILQILRNAGIVQFVAVGNTIPVALDGCYKFNQVGVASVANTIWETQIAYTYNL 179 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 +D+++AIS +G + L + G +AIT + L + +++ + T E+ Sbjct: 180 KENDVVIAISNSGASKRLIDVIEIAKEKGAVTIAITNSDKSPLAKLSNYHIKTATREK 237 >UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C0Q155_SALPC Length = 293 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 14/213 (6%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L + ++ +A ++ P T ++S +A+ VS SS+ K ++KLG+ GF LKL++S+ Sbjct: 21 LGKKERAIARFIHDNPQTLSNMSITDIAHYLKVSVSSITKVSKKLGFTGFHDLKLSISKN 80 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML---R 130 + + ++ +P+ G + + E + + A+ LNV + + Sbjct: 81 INNNEDTVDIPVIPDSEG--FIEKIFESTLLNSILALQEALNVIDCSIIKSVAWLFIHKN 138 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + +I + G G S + +F KL+KIG + D H L + D+LLA+S++G Sbjct: 139 AEAKIFIAGCGGSASICDDFNHKLLKIGIFSTVFSDSHKQLMSASLMRQGDILLAVSHSG 198 Query: 191 ----VRRELNLAADEMLRVGGKVLAITGFTPNA 219 + + +N+A + G + + +T + PN+ Sbjct: 199 QTSDIIQMVNIANER----GAETICLTNY-PNS 226 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37767 Uncharacterized HTH-type transcriptional regulat... 331 1e-89 UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=... 284 3e-75 UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 283 6e-75 UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=A... 283 6e-75 UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=A... 281 2e-74 UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Ac... 278 1e-73 UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales Re... 273 4e-72 UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteri... 273 6e-72 UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=T... 268 2e-70 UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=D... 267 4e-70 UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax... 266 5e-70 UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulat... 263 6e-69 UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=... 263 6e-69 UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=B... 262 7e-69 UniRef50_D2AR91 Putative transcriptional regulator, RpiR family ... 262 1e-68 UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Ba... 262 1e-68 UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus ... 260 4e-68 UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulat... 260 5e-68 UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=P... 259 6e-68 UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus ... 259 7e-68 UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=K... 259 7e-68 UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=A... 259 7e-68 UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=T... 259 9e-68 UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium ... 258 1e-67 UniRef50_P44540 Uncharacterized HTH-type transcriptional regulat... 258 1e-67 UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=H... 258 2e-67 UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopo... 257 3e-67 UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Sta... 256 5e-67 UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus ... 255 9e-67 UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n... 255 1e-66 UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=B... 255 1e-66 UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATC... 255 1e-66 UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttle... 255 2e-66 UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostri... 254 2e-66 UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonel... 254 2e-66 UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=G... 254 2e-66 UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=B... 254 2e-66 UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n... 254 3e-66 UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=C... 253 4e-66 UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostri... 253 4e-66 UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. ... 253 5e-66 UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collins... 253 7e-66 UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=C... 252 9e-66 UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putativ... 252 9e-66 UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteri... 252 1e-65 UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=G... 251 2e-65 UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=B... 251 2e-65 UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Provide... 251 2e-65 UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=... 250 3e-65 UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Cl... 250 3e-65 UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteur... 250 4e-65 UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=A... 250 5e-65 UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=S... 250 5e-65 UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=C... 250 6e-65 UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n... 249 6e-65 UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia... 249 7e-65 UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=B... 248 1e-64 UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=B... 248 1e-64 UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=F... 248 2e-64 UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulat... 248 2e-64 UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Se... 247 3e-64 UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostri... 247 5e-64 UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator... 246 7e-64 UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostri... 245 9e-64 UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=E... 245 1e-63 UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=P... 244 2e-63 UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=P... 244 3e-63 UniRef50_B9K581 Transcriptional repressor of rpiB expression; tr... 243 7e-63 UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n... 242 7e-63 UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Er... 242 8e-63 UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax... 242 8e-63 UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=P... 242 1e-62 UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=C... 242 1e-62 UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=S... 242 1e-62 UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collins... 242 1e-62 UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp... 238 2e-61 UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostri... 238 2e-61 UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enteroba... 238 2e-61 UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=At... 237 3e-61 UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oen... 237 3e-61 UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseria... 237 5e-61 UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n... 237 5e-61 UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=... 237 5e-61 UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=... 236 5e-61 UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment)... 235 9e-61 UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator ... 235 1e-60 UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax... 235 2e-60 UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU 234 2e-60 UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=... 234 2e-60 UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=G... 234 2e-60 UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=S... 233 4e-60 UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=T... 233 4e-60 UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=... 233 5e-60 UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostri... 233 5e-60 UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=B... 233 5e-60 UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=B... 233 5e-60 UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_... 233 6e-60 UniRef50_P26833 Uncharacterized HTH-type transcriptional regulat... 232 8e-60 UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus la... 232 9e-60 UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales ... 232 1e-59 UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR... 232 1e-59 UniRef50_Q184N2 Putative phosphosugar-binding transcriptional re... 232 1e-59 UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=L... 232 2e-59 UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=A... 231 2e-59 UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=A... 231 2e-59 UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=K... 231 2e-59 UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus ... 231 3e-59 UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulat... 230 3e-59 UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulat... 230 5e-59 UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=At... 230 6e-59 UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=... 230 6e-59 UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus si... 229 8e-59 UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=A... 229 9e-59 UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rh... 229 9e-59 UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=St... 229 1e-58 UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostri... 229 1e-58 UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium bu... 229 1e-58 UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor... 228 1e-58 UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=P... 228 1e-58 UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hy... 228 2e-58 UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=K... 228 2e-58 UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Ta... 227 3e-58 UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostri... 227 3e-58 UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU 227 4e-58 UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus ... 227 4e-58 UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulat... 226 4e-58 UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus ... 226 6e-58 UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=A... 226 7e-58 UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus ... 225 2e-57 UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocace... 225 2e-57 UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=A... 225 2e-57 UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=A... 225 2e-57 UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=P... 224 3e-57 UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=S... 223 4e-57 UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Ga... 223 4e-57 UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=B... 223 4e-57 UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, ... 223 6e-57 UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteoba... 223 7e-57 UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales ... 222 1e-56 UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=B... 221 1e-56 UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecali... 221 1e-56 UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=L... 221 2e-56 UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio ... 221 2e-56 UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=S... 221 2e-56 UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostri... 221 2e-56 UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales ... 221 2e-56 UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n... 221 2e-56 UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 T... 221 2e-56 UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=B... 221 3e-56 UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=B... 221 3e-56 UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=F... 220 3e-56 UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=... 220 4e-56 UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=L... 220 4e-56 UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=P... 220 6e-56 UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=B... 219 7e-56 UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus ... 219 7e-56 UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enteroco... 218 1e-55 UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, ... 218 1e-55 UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax... 218 1e-55 UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=P... 218 2e-55 UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=P... 218 2e-55 UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmone... 218 2e-55 UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostri... 217 3e-55 UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulat... 216 5e-55 UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n... 216 5e-55 UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacte... 216 6e-55 UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillac... 215 1e-54 UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus pl... 215 2e-54 UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostri... 215 2e-54 UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID... 214 2e-54 UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=S... 214 2e-54 UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus ... 214 2e-54 UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=F... 214 2e-54 UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=E... 214 3e-54 UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejue... 214 3e-54 UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteri... 214 4e-54 UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=F... 213 4e-54 UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID... 213 5e-54 UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, ... 213 5e-54 UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdema... 213 5e-54 UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=E... 213 7e-54 UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escheri... 213 7e-54 UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=F... 212 9e-54 UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp... 212 1e-53 UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1... 212 1e-53 UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n... 212 1e-53 UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=O... 212 1e-53 UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=D... 212 1e-53 UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pe... 211 2e-53 UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=P... 211 2e-53 UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=... 211 2e-53 UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III... 211 3e-53 UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=L... 210 4e-53 UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=S... 209 7e-53 UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=F... 209 7e-53 UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1... 209 9e-53 UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n... 208 2e-52 UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family... 208 2e-52 UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillale... 207 3e-52 UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacte... 207 4e-52 UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acid... 206 6e-52 UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=C... 206 6e-52 UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostri... 205 1e-51 UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdema... 205 1e-51 UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus... 205 1e-51 UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus ... 205 2e-51 UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacte... 205 2e-51 UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=L... 205 2e-51 UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=La... 204 2e-51 UniRef50_P46117 Uncharacterized HTH-type transcriptional regulat... 204 3e-51 UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Ba... 203 4e-51 UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus pl... 203 6e-51 UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=M... 203 6e-51 UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=S... 203 7e-51 UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=P... 202 8e-51 UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostri... 202 1e-50 UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional... 202 1e-50 UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=M... 201 2e-50 UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=R... 201 2e-50 UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus ... 201 2e-50 UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=L... 201 2e-50 UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID... 200 3e-50 UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteracea... 200 4e-50 UniRef50_B1Y2D5 Glucokinase n=1 Tax=Leptothrix cholodnii SP-6 Re... 200 4e-50 UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional... 200 4e-50 UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostri... 200 5e-50 UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=... 200 5e-50 UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, ... 200 5e-50 UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillu... 200 5e-50 UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator... 199 1e-49 UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacte... 199 1e-49 UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, ... 198 1e-49 UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax... 198 1e-49 UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=La... 198 2e-49 UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macroco... 198 2e-49 UniRef50_Q38V38 Putative transcriptional regulator with a sugari... 197 3e-49 UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=La... 197 3e-49 UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collins... 197 3e-49 UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family pr... 197 3e-49 UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax... 197 4e-49 UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonel... 197 4e-49 UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteoba... 196 5e-49 UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collins... 196 5e-49 UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 ... 196 5e-49 UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n... 196 5e-49 UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID... 196 8e-49 UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=P... 195 1e-48 UniRef50_Q041H9 Transcriptional regulator n=22 Tax=Lactobacillus... 195 2e-48 UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=K... 195 2e-48 UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax... 194 3e-48 Sequences not found previously or not previously below threshold: >UniRef50_P37767 Uncharacterized HTH-type transcriptional regulator yfhH n=149 Tax=Enterobacteriaceae RepID=YFHH_ECOLI Length = 282 Score = 331 bits (850), Expect = 1e-89, Method: Composition-based stats. Identities = 282/282 (100%), Positives = 282/282 (100%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY Sbjct: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE Sbjct: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD Sbjct: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA Sbjct: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV Sbjct: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 >UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788119 Length = 278 Score = 284 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 78/282 (27%), Positives = 144/282 (51%), Gaps = 5/282 (1%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MNG L+R+R+ Y L S++K+A ++L +P +S LA +G SQ+++V+ + +G Sbjct: 1 MNGGLVRLREVYDSLNPSERKVAAFILQEPAEMIQMSVADLAVRSGSSQAAIVRLCKTMG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +KG+ LKL ++ L + P + IR +D + + + + N ++ T+ + E Sbjct: 61 FKGYQDLKLKVAGDL----QEPLATGYQDIRPNDSISAIIQNVSNNNIQSIRDTMKIMEE 116 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E V L ++RI + G+GAS L+ + K ++I + D H L + +P Sbjct: 117 GMVEEAVLALDQSKRIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTP 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD + ISY+G E+ AA G K + IT + + L + LYT + E S Sbjct: 177 DDAAVCISYSGETDEVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRS 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ Q L D+L++ + ++ E + + + S +K+L Sbjct: 237 GAMSSRITQLNLIDILYLGVASRNYENSVKYLDESRRAIKRL 278 >UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes RepID=Q8R7I8_THETN Length = 285 Score = 283 bits (724), Expect = 6e-75, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 148/277 (53%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ Y L ++KK+ADY+L ++ +LS +LA + G ++++V+F +++G Sbjct: 8 NVILKIQSIYNSLTNAEKKVADYVLENAESVIYLSITELAEKCGTGETTIVRFCRRIGLS 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A P IH I +DPL ++ +K+ ENT A+ T+ + S + Sbjct: 68 GFQEFKLNLAKEIAE----PETSIHENISFNDPLDVLVQKITTENTLAISNTVKLLSMSE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + +AR+I G+GASG A + +K M++G N A D H + + + D Sbjct: 124 LEKAVDAIINARKIQFYGVGASGYTALDAKYKFMRLGLNVDANLDAHIQAISAVSLTDKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ G +V+AIT + + + A L T A+E S + Sbjct: 184 VAVGISFSGSTKDTVETCRLAKEAGARVIAITNYARSPITSVADIVLLTSAKETPLRSGA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D+L+ A+ + + A + + + V Sbjct: 244 LTSKIAQLHILDILYTAVAVKLKDKAVQELNKTAKAV 280 >UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C6WFA6_ACTMD Length = 304 Score = 283 bits (724), Expect = 6e-75, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 131/277 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++IR GLA++++++A +L P T H S ++A AG S+++V +F + +G Sbjct: 9 SPLVKIRSLLPGLARAEQRVAKVVLDNPATVAHRSITEVAESAGTSETTVTRFCKAIGVG 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + I D LR V K+ + A+ T + + Sbjct: 69 GYPELRIALAADTARTAARTDRDLGGDIGPGDDLRQVVGKVAFADARAVEETAEQLNVDT 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+ + G GAS VA + KL +IG A D H L + + D Sbjct: 129 LQAVVDAVARAGRVDVYGFGASAFVAFDLQQKLHRIGRTCFAWNDTHIALTSAAVLTGAD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A G +A+T F + + + A H L T A E S + Sbjct: 189 VAVGISHTGSTTETVEALRVARERGATTVALTNFPRSPISEVADHVLTTAARETTFRSGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D LFI + Q +E A + + V Sbjct: 249 MASRIAQLTVVDCLFIGVAQHHVESATSALEATYDAV 285 >UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7MQM6_SACVD Length = 333 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 77/278 (27%), Positives = 132/278 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A +L P + S ++A A S+++V +F + +G Sbjct: 38 SPLVRIRSLLPGLARAEQRVAKVVLEDPSSVARRSITEVAMAAKTSETTVTRFCKAIGVG 97 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A S + I DD L V K+ + A+ T + Sbjct: 98 GYPQLRIALAADTARTEAKSSRDLGGDITADDDLASVVSKVSFADARAVEETAEQLDIAE 157 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +L A R+ + G+GAS VA + KL +IG + A D H +L + S D Sbjct: 158 LTRVTELLAEATRVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEGD 217 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G + A G +AIT F + + A H L T A E S + Sbjct: 218 VAVAISHSGATTDTVEALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRSGA 277 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D LFI + Q+ ++ + + + V Sbjct: 278 TASRIAQLTVIDCLFIGVAQRRMDESMAALEATREAVN 315 >UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F6M8_SACEN Length = 308 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A+ +L P + S ++A AG S+++V +F + +G Sbjct: 14 SPLIRIRSLLPGLARAEQRVANIVLADPASVARRSITEVAEAAGTSETTVTRFCKAIGVG 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + S + + I +D +R + EK+ + A+ T + E Sbjct: 74 GYPDLRIALAADTA-RTSSRDRDLGSDIGPEDDVRKIIEKVSYADAKAVEETADQLDAET 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + ARRI + G+GAS VA + KL +IG A D H L + D Sbjct: 133 LRSLVDAVARARRIDVYGVGASAFVALDLQQKLHRIGLTCFAWSDTHNALTSAAVLREGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A E + G A+T F + + + A H L T E S + Sbjct: 193 VAIGISHTGATTETVEALQEAGKRGATTAALTNFARSPITEVADHVLTTAVRETTYRSGA 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ Q + D LFI + Q+ L+ + + V Sbjct: 253 MASRIGQLTVIDCLFIGVAQRHLDQTKAALEATYEAV 289 >UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales RepID=C0ZD50_BREBN Length = 288 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 139/277 (50%), Gaps = 5/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++R Y L+ ++++ADY+L H S +LA++ + ++V + ++LG++G Sbjct: 11 VLTQLRAIYTQLSGKEQQIADYILEHASEIIHFSITELADQCQCADATVFRLCRRLGFRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIR-GDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + A K+AL+ + +P IH +I DD + + EK+ N + T + ++++ Sbjct: 71 YQAFKIALASEVT----NPKQTIHQEINLDDDDVSAIAEKIFTANIETIRDTQQIINKDE 126 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V+ L +A RI G G S ++AQ+ K M+ G D H + + + Sbjct: 127 LMKIVSCLENASRIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLTKGA 186 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS++G +++ A G K + IT + + L + A CLYT + E + + Sbjct: 187 VVVGISHSGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFRTEA 246 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ AQ L DLL++A+ + E I+H + Sbjct: 247 LSSRLAQLSLIDLLYVAVSLRRQEDTIANIQHIREAI 283 >UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A8S9N1_9FIRM Length = 321 Score = 273 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 145/274 (52%), Gaps = 1/274 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+R+ L+ +++++A ++L PD L+ + LA + S SSVV+ + +G++ Sbjct: 36 NVLLRLREVQPSLSSTERQIAQFILENPDETTTLTIRDLARRSFSSPSSVVRICRVIGFQ 95 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ LA+ E+ S I D L+ + +K+ +N ++ T + ++ Sbjct: 96 GYKELRHALTLELATLGENGSHR-EKDITPQDSLQEIVDKVTHKNIQSLLDTQRLLLLDE 154 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +CV ++ +AR ++L GIG+S VA++ K +++ D H+ L + ++ D Sbjct: 155 LEQCVELIANARTVLLFGIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNATAQD 214 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + SY+G E+ EM G V+A+T + P+ + Q A H LY A E + + Sbjct: 215 VGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFRNGA 274 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S+ +Q + D+L+ A ++ E R+ + Sbjct: 275 MSSRLSQLNVVDILYTAYASRNHEDTMRRLTKTH 308 >UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSQ6_9FIRM Length = 287 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 134/277 (48%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RIR Y+ L ++++K+ADY+L HLS +LA +G +++++ + QK+GY+ Sbjct: 10 GCLPRIRSIYKALTKAEQKVADYILENAAKVVHLSITELAEVSGSAEATIFRLCQKVGYR 69 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ L +P+ ++ + D + ++ K+ + + TL + E Sbjct: 70 GYQHFKIALAGDLY----TPAELVYKDVNAGDSMGVIARKVFHDINEGLQDTLKIIDEAA 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + ARRI G S ++A + ++ M+ G A D H + + P D Sbjct: 126 LDKAVAAITKARRIDAYGSAGSAVIAADIEYRFMRFGIPVRAYADPHMQIISAALMQPGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L +A+S+TG R+L + + G V+AIT + + L + A L A+E S + Sbjct: 186 LAIAVSHTGANRDLLDSVAMAKQNGATVIAITSYMKSPLSKLADITLCGSAKETEYRSEA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++A + D L++ ++ + E + + Sbjct: 246 MAARLVHLAIVDALYVGVMLDRQDCIVENMEKIRKAI 282 >UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=Dictyoglomus RepID=B8E0M8_DICTD Length = 281 Score = 267 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 141/277 (50%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I+++ + S++K+A+Y+L + HL +LA GVS++++V+ +KLG + Sbjct: 4 SILEKIKEQKESFRDSEEKVANYILARWQEVLHLPITELAERIGVSEATIVRMCKKLGLR 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+AL+ ++ P +H ++ D L + +K+ N AM +TLNV S ++ Sbjct: 64 GFQELKIALA----TEKIQPIKTVHQAVQEGDDLETILKKVFSANIRAMESTLNVISVKE 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + +AR++ + G+G SG VA + K MK G A D H + + P D Sbjct: 120 IERAIDAILNARQLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILEPQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +++ A + G + IT + L + L +EE + S Sbjct: 180 VVIGISASGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYRTES 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SA AQ + D L+I + + L+ E ++ + + Sbjct: 240 TSARIAQLSIIDTLYIGVALKRLDKMIENLKLTREAI 276 >UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77F Length = 277 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 148/281 (52%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ L +++K++A Y++ P+ S+ +L + S ++VV+FA+KLGY Sbjct: 1 MSCITRIKEA--SLTETEKEIAQYIIEHPEQVLDDSAMKLGEKTHSSSAAVVRFAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFP LK+ L++ L + N + D+ + + K+ + T ++ S Sbjct: 59 SGFPQLKIELAKDLVGSIPE----VDNLLHPDEDMATLMNKVHHSQIVTIDKTYHLLSAS 114 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V L A+ + L G+G S +V +F KLM+IG A D+H + +V + + Sbjct: 115 TLEDVVKALEQAKHVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNMTEE 174 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + +SY+G + + AA + +AIT N L + H L ++EQ+ Sbjct: 175 DLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSLRIG 234 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ ++ ++ DLL+ L++++ E ++I ++ +++++ Sbjct: 235 AMSSRYSSLIVVDLLYYGLVKRNKEKYAQKIINTRRIIQEM 275 >UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulator TTE0211 n=3 Tax=Clostridia RepID=Y211_THETN Length = 282 Score = 263 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 134/277 (48%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L IR+ S+ K+A Y+L P LS +LAN S++S+++F + +G K Sbjct: 3 DVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ +LA Q + I +D + V +K+ N A+ +T+ V + E+ Sbjct: 63 GFQELKIKIAVSLAKQTR----KLDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEE 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +A +I G+ ASG+VA + K +I A +D H L + D Sbjct: 119 LTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G +E+ A G +++T + + L + A L+ +EE + + Sbjct: 179 VAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D+LFI + Q+ + ++ ++ Sbjct: 239 MASRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVL 275 >UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GD47_CLOBL Length = 281 Score = 263 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 147/281 (52%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LLRIR+ + + +S+KK+A+Y+ P S+Q++A + S +S+++F +K+GY Sbjct: 1 MGVLLRIRENFDSMTKSEKKIAEYIFKSPKDIISDSAQEIAIKTSTSPASIIRFTKKVGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K AL +A + S I +D + + KL + + T + +E Sbjct: 61 NSLNEFKFAL---VAEEYTKESTEFDYIINYNDSIDSIINKLGNKVIDTINDTKELVDDE 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL E V +++A I L G+GAS +VA +F +KL++I +D H LA + Sbjct: 118 KLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNR 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G RE+NLA +E + G +AIT + L A L + E+ Sbjct: 178 DVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ L Sbjct: 238 AISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVL 278 >UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=Bacillales RepID=C4L752_EXISA Length = 282 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 81/278 (29%), Positives = 146/278 (52%), Gaps = 4/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNG RIR Y L++ ++++ADY+L QP+ H + Q+A++ V++S+V +F Q++G+ Sbjct: 4 MNGTARIRGAYSTLSKKEQRIADYILKQPEQIIHHTINQVADDLDVAESTVFRFCQRVGF 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ ALK+AL+ + + P IH I D + EK+ N + +T + Sbjct: 64 KGYQALKIALASDVVA----PLQDIHEDITETDTALEIAEKIFSTNGKTIESTRQILEGV 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + ARRI G G S +VA + K ++ G +A+ + H L + + Sbjct: 120 SLEKAVELFLGARRIEFFGSGGSAVVALDAYHKFVRSGLQVSAMLESHMQLMSASQLTTA 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G +E A + G ++AIT + + L + A LYT+++E A S Sbjct: 180 DVAVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETAFRSE 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++ A+ L D LF A++ + E A ++ + Sbjct: 240 ALASRIAELSLIDALFTAVMMRRGEAARTSLQQMREAI 277 >UniRef50_D2AR91 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AR91_STRRD Length = 299 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 139/281 (49%), Gaps = 2/281 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + +R L + + +A +L P + + + +G S++++V+ A+ LG+ Sbjct: 11 NLVATVRAVLPSLTPAAQAIARLILDDPGMVARSTITEFSAVSGTSEATIVRTARALGFA 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ A+A E P + + DDPL V K+ + + A+ T + ++ Sbjct: 71 GYSQLRFALAAAVAR--EEPERLVPGDLGPDDPLTDVIAKVTRAESEALADTAAQLNPDR 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + +ARR+ + G+GASGLVA + A KLM+IG ++ A D H L + D Sbjct: 129 LGAVVEAMTAARRVDVYGVGASGLVAADMAQKLMRIGRSSHAFTDAHLALTSAALLGEGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S TG ++ + G +AIT ++L + A H L + E A + Sbjct: 189 VTVGVSCTGETPDVIAPMRVARKAGATTVAITNNPRSSLAELAEHVLVSAGRETAFRPGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +++ +Q ++ D +F+ + Q+ E + +R + + + + Sbjct: 249 LASRISQLLIVDCIFVGIAQRTFETSDAALRATRGALDEFM 289 >UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J1X3_9BACL Length = 289 Score = 262 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 134/277 (48%), Gaps = 3/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L+ ++KL +Y+L P T H +LAN G+S S+V +F + +KG Sbjct: 4 ILHAVSSHLETLSPQERKLGEYILESPATVIHQGITELANACGISPSTVTRFCKTFHFKG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP K+ L+ LA +P + I + L+ + E + + A++ T + +L Sbjct: 64 FPDFKMKLASELAHKPAENH---YQDIIAGNDLQKIVEAMEANHLASITDTTRLLDMNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V L A+RI L G+ S +VAQ+F KL++IG N A D H + + + D+ Sbjct: 121 SRAVEALCRAKRIDLYGVATSSIVAQDFYQKLVRIGKNCTAFADSHMQITSASSLGEGDV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LAISY+G E A G L++T ++ N+L A L++ + E+ + Sbjct: 181 ALAISYSGETPETIDALRCAKDSGATTLSLTQYSSNSLASLADIALFSSSLEEGMRRGDM 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D+LF ++ + + ++ S V+ Sbjct: 241 ASRIAQLHVIDILFTGMVSLEFQDFIPKLESSYQNVQ 277 >UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7S3_BREBN Length = 288 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 149/279 (53%), Gaps = 3/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 GL+ ++ L S++K+ADY+L P+ LS Q+LA +GVS++++++ A+ L K Sbjct: 7 GGLVGLQAILDQLKPSERKVADYILAHPEDVVKLSVQKLAEYSGVSEATIIRLARSLNMK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LKL ++ L Q S + +I + + + + + N ++ TL+V S E+ Sbjct: 67 GYQELKLRVAGDLTKQTARGS---YQEIMMEGSVESIMQAVSWNNIQSIQDTLSVLSNEE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L AR+I + G+GAS ++A + K +I A D HA L + + D Sbjct: 124 VKKAVDVLSVARKIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ ISY+G ++ + E + G ++ +T F P+ + + A+ L+T + E++ S + Sbjct: 184 VVIGISYSGQTEDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ AQ + D+LFI +I + E + S V + Sbjct: 244 MASRIAQLNVIDILFITMISRMQERVIPLLEKSRLAVSR 282 >UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulator CA_C0191 n=5 Tax=Clostridia RepID=Y191_CLOAB Length = 283 Score = 260 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 135/276 (48%), Gaps = 2/276 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+RI++ L S++K+A+Y+L LS ++LA ++G S+S+VV+ + L YKG+ Sbjct: 5 LIRIKEIINDLNPSERKIAEYILNNSKAISDLSIKELAGKSGSSKSAVVRLCKILNYKGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++A+++ + + + + I D L + + + N ++ T+ V SEE + Sbjct: 65 KEFRIAIAKDTVNVDKEENR--YTDINPKDDLHTIIKNISYNNKKSIDNTMEVLSEELVE 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + A R+ GIGAS +VA + K M+I N A D H + D+ Sbjct: 123 KASEAISKAYRVDFYGIGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKGDVA 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AISYTG ++ + G +++T F N++ L+ ++ E S ++S Sbjct: 183 VAISYTGETKDTFESIKAAKEAGATTISVTKFGSNSISDLCDINLFVLSPEITFRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + AQ + D+LF ++ + E E + ++ + Sbjct: 243 SRIAQLNVIDILFTSVAGRMFEEVKEFLENTRKSTR 278 >UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7K6_PAESJ Length = 284 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 2/272 (0%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I Y ++KK ADY+L D ++S LA GV ++S+ +F + LG+KG+ Sbjct: 10 IHSHYNRFTATEKKTADYILEHADAVVYMSITDLAEGCGVGEASIFRFCKALGFKGYQQF 69 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+AL+ ++++ E P + Q++ D L K ++ N A+ T + + ++ + Sbjct: 70 KIALAHSISADNEIPQ--LSGQVKIQDTLEDAVSKTLQSNINALNETFKLIQLDSINRAI 127 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L + R I G+G+S + A K M+I D H + D+ + I Sbjct: 128 DLLIRSDRFIFYGVGSSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMGERDVAIII 187 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 SY+G ++ A + G ++ IT F + L + L A E S+SA Sbjct: 188 SYSGSTKDSIEVAKKAKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQGGSLSAKI 247 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 AQ L D+L++ ++ E + ++ A V Sbjct: 248 AQLYLLDVLYVEYFKRTYEASIVNKENTSAAV 279 >UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJF9_BREBN Length = 297 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 132/277 (47%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I+ +S++K+A +L Q D+ + S LA +AGV +++V++F +K+G+ Sbjct: 20 NTLLHIQSLLPSFTKSEQKVAHIVLQQTDSVIYSSVIDLAEKAGVGETTVLRFCRKIGFH 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL++ L + P +H ++ DD L ++ K+ N A+ T + E+ Sbjct: 80 GYQEFKLALAQELVN----PVKNLHGEVGEDDSLDIITHKVTATNQQAIGDTSALFQLEQ 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV +L+ A I G+G S + AQ+ + ++IG A + H P D Sbjct: 136 LERCVDLLQKANTIHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLGPGD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G ++ + + G + +T + + + A L T A+E S Sbjct: 196 VAIGLSVSGSTKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQGGS 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++A AQ + D++ + ++ E A + V Sbjct: 256 LAAKIAQLHVLDVISTTITMRNKEKALLYKERTAKAV 292 >UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM2_KOSOT Length = 283 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 4/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I +++KK+A +++ P ++S ++++ VS+ S+V+F QKLGY Sbjct: 6 NVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+AL+ S+ + D L + + + + + T SEE Sbjct: 66 GFHPFKIALA---VSENQESFSSSEFDFNSRD-LSSLKNYVAQRHIDVIKNTSEFISEEI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV + +AR I+++G+GASG A + +K M+IG N D H D Sbjct: 122 LEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAIS +G E+ AD + G V+AITG+ + L + A H L T E S + Sbjct: 182 VLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + AQ + +LLF A+ + E + I + V K + Sbjct: 242 LRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWI 282 >UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=Actinomycetales RepID=A8LV24_SALAI Length = 320 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 137/278 (49%), Gaps = 1/278 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L R+R L + +++A+++L P+ A + +LA +G S +++ +F + +G++ Sbjct: 32 GVLARVRAGADDLTGALRRVAEHVLSDPEAAARATIVELAERSGTSPATITRFCRAMGFE 91 Query: 62 GFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L+L ++ + +V I +I+ DPLR V +++I +T AM+ T + Sbjct: 92 GYADLRLGIAAETGRARLAGWTVDIGREIQPGDPLRRVLDQIIAADTRAMHDTAALLDLA 151 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + A R+ + G S LV + + L +IG A A D+H LA+ Sbjct: 152 EVERAAVAIAGASRVNIFGASGSALVGEEMQFMLHRIGVAAWAWSDVHEGLASAALLRVG 211 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ L +S++G RE E G +A+TGF + L + A L T + Sbjct: 212 DVALGVSHSGQTRETIEMLAEAGSRGATTVAVTGFPRSPLAELADIALLTASRATTFRPD 271 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++SA H Q ++ DLL+IA+ Q+ + A +R + V Sbjct: 272 ALSARHPQLVVLDLLYIAVAQRTHDRAHAALRRTAQAV 309 >UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8T9_9THEO Length = 282 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I++ S+ K+A Y+L D LS +LA S++S+V+F + +G K Sbjct: 3 DILTVIKELEATFKPSEAKIAKYILDNADVVTELSINELARACDTSEASIVRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ +L+ Q + + I DD + V +K+ N A+ T+++ + Sbjct: 63 GFQELKIKIAVSLSKQTK----KLDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDVKS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V L +A +I G+ ASG VA + K +I A +D H L + D Sbjct: 119 IIKAVDALSNANKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G RE+ A + G +++T F L + A L+ +EE S + Sbjct: 179 VAFGISYSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRSGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ AQ + D+LFI + ++ + + ++ + Sbjct: 239 TASRIAQLTVIDILFILVAKRKYNDVVKFLENTTEAL 275 >UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium RepID=C3WE65_FUSMR Length = 284 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 151/265 (56%), Gaps = 1/265 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++I ++ ++KK+ +Y+L PD + L++ +LAN SQ++VV+FA++LG+ Sbjct: 1 MGVLIKINSMLDNISSTEKKVGEYILENPDKIKDLNTYELANITKTSQATVVRFAKRLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPI-HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGFPA KLALS+ L ++ V I H +I+ DD ++G K+ EN A+ T V Sbjct: 61 KGFPAFKLALSQDLGNRKAESHVNIMHEEIKPDDSFEIIGRKISNENITAISDTYEVTDF 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V ML AR+I+L GIG SG+VA++F +KL+++G +A D H L+ + Sbjct: 121 TELEKAVVMLSKARKIMLAGIGFSGIVAKDFYYKLLELGKHAMIEVDTHMQLSCLSTMGE 180 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+L IS++G E+ G V+A+T PN ++ A L T+ S Sbjct: 181 DDVLFVISHSGKTMEMYNVVKVAKSKGITVIAMTSIAPNPIKDLADIRLNTVEMNSNFRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 ++S +Q + D+L++ ++ ++ Sbjct: 241 TALSPRISQLTVIDMLYVKMMLENK 265 >UniRef50_P44540 Uncharacterized HTH-type transcriptional regulator HI0143 n=33 Tax=Gammaproteobacteria RepID=Y143_HAEIN Length = 288 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 138/277 (49%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V +L+ ARRI L G+G+SG+ A++ KLM+IGF A + H + + D Sbjct: 126 LEEVVKVLKKARRIFLFGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S++G E + G +A+T + + + A + L ++ S Sbjct: 186 VAIGLSHSGYSAETAHTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I AQ + DL++ L+Q + ++A + + + ++ Sbjct: 246 IGTKIAQLFVLDLIYALLVQGEEDIAAQTKQKTLNVI 282 >UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ1_HIRBI Length = 297 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 82/277 (29%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + RIR R L S +ADY+L + +S +LA G S+ SV+ ++LG Sbjct: 20 NVISRIRIRKDSLGPSTSTIADYVLGHANAVVGMSVTELAEATGTSEGSVINLCRQLGLS 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH ++ D V +K+ + A+ TL++ + Sbjct: 80 GFQQLKLSLAQEVVR----PVQFIHEDLQPSDDTSTVCQKMFHAGSEALRETLSILDPDA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++RSA R+ + GIG+S +A++ +++++IG +A V D H + + P+ Sbjct: 136 ISMAVDVIRSADRVEIYGIGSSAPIAEDAQYRMLRIGLDAKVVVDSHIQAISASRTGPNV 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G K + IT F + LQ A LYT+A E S + Sbjct: 196 AVLTISHSGSTHETLAATRLARDAGAKTIIITNFASSPLQAYADVKLYTMARETKFRSEA 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D+L AL D E A +R + ++ Sbjct: 256 MTSRIAQLCILDVLIAALALDDYERATTVLRQTSEVL 292 >UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8M2_9ACTN Length = 291 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 138/274 (50%), Gaps = 1/274 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++R+R+ L ++K +A Y+L P + LS + LA + VS ++VV+ + +G++ Sbjct: 3 NIIIRLRENIGFLNPAEKAVARYVLQCPHESNRLSVKALAARSFVSPAAVVRMCKSIGFE 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K L+ LA++ + I+ +D L + +K+ +N ++Y L + E Sbjct: 63 GFKEFKTELTRELATEKLILPLD-TKDIKQNDTLESIIKKITLKNIHSLYDALRLIDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L++ RI+L G+GAS + A++ K +++ D H L T + S+ D Sbjct: 122 IEKAVELLQACDRILLFGLGASLIAAKDANLKFLRVNKTCLINDDWHLQLITARNSTSQD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + ISY+G E A+ + ++AIT + + + A LYT + E SA+ Sbjct: 182 VGIVISYSGQTAETLTCAEILKHNNTPIIAITRCIESPISKLADVLLYTTSNESLFRSAA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S+ +Q + D+L+ A D E + + Sbjct: 242 MSSRISQLNIIDILYTAFAVSDYEKNFTYLSKTR 275 >UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LA29_STAHJ Length = 283 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 136/276 (49%), Gaps = 2/276 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+ I L S++++A+Y+L PD + S Q+LA+ VS ++VV+ ++KL KGF Sbjct: 5 LIIIESSLSDLNPSERRVAEYILEHPDEIINYSVQKLADLTNVSVATVVRLSKKLKCKGF 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL ++ L + +I D + V + + NT + T + S E + Sbjct: 65 QDLKLKIAYDLNE--PGNIQRGYAEIDKDYSIEEVTQTVFHNNTKTLRDTERILSTENIK 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 ++ ++R+ + GIGAS L+AQ+F KL +I + + S +D++ Sbjct: 123 HAFELIVNSRKTCIYGIGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSSEDVV 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AIS +G +++ + G KV++IT + N + + L+ + E+A S ++S Sbjct: 183 IAISSSGQTKDIVNSTQLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A + D+L+I + D +++ ++ +K Sbjct: 243 SRIAMLSIIDILYICIASNDYLSNRQKLENTRKAIK 278 >UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4B4_9BACL Length = 288 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 130/277 (46%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L++IR + L ++ +A+Y+L + HLS + LA + S +SV++F + +GY Sbjct: 7 NILIKIRDMKENLTPVERMVAEYILANTEDIPHLSIKSLAKLSKTSDASVLRFCKTMGYS 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + +++S AL S + + I+ D L + + + N ++ TL+V + Sbjct: 67 GYRSFIVSISAALGSMDDERK-DQYTDIQPGDDLDTIIANISRNNMKSIEDTLSVLDRGE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V LR++ RI+ GIGASGLV Q+ K +I + D H+ L D Sbjct: 126 VARAVKALRASNRIVFFGIGASGLVCQDGEQKFSRINKMCHSYTDGHSQLTAATLLGKGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G E+ + + +AIT + + L +A L E S + Sbjct: 186 VAIFVSNSGNTLEIIETLEIAKKNNATTVAITKYNKSELADKADILLGISTPEITMRSGA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + A + D+LF + + + + + + +++ Sbjct: 246 MGSRIAMLTIIDMLFAGVASAEYQNVKKYLTKTHSIL 282 >UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n=51 Tax=Bacillus RepID=A8FJ30_BACP2 Length = 285 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 137/279 (49%), Gaps = 3/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR +GL K +A+++ +P HLS +LA + S++++ + ++LG++ Sbjct: 7 SSIEKIRAASRGLPPKLKAIAEHITSEPRDIIHLSIVELAKKTASSEATIFRLCKRLGFE 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+A+++ + ++ + ++ DD + + +K+ + N +A+ + + + E Sbjct: 67 GFQDLKIAIAQEI---DQTKPNYVDEEMSLDDDMAVFMQKVFQTNISALKDSFQLLNPED 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ A+R+ G G SGL+A + K M+ G N D H + Sbjct: 124 VEKAIQIIHEAKRLEFYGSGGSGLIATDAFHKFMRTGINCIVHTDSHFQAMSAGLLDQHS 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ IS++G ++L A G K + IT + + L Q A LYT +E A + + Sbjct: 184 TVIGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLADVTLYTATQETAFRTEA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +SA AQ + D+L+ AL + ++ + + Sbjct: 244 MSARLAQLTVIDVLYFALAHLRQQETITNLKQMRETISQ 282 >UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PDB4_BACCO Length = 283 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 70/274 (25%), Positives = 139/274 (50%), Gaps = 4/274 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI+ Y + ++K+ADY+L P H + Q+A++ V+ ++V +F +++G+ G Sbjct: 10 CLHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK+AL+ A P + ++ D + V K+ + N + T++ +++ L Sbjct: 70 FQALKIALAAEAAR----PGKNMDEAVKDTDNEKAVAIKVFESNIETLQDTIHTLNQKHL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 HE V + A+ I+ G G++ ++A + K ++ A D H L + + +D+ Sbjct: 126 HEAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKEDV 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+ G +E+ + + G K +AIT F + L Q+A L+T+++E +S Sbjct: 186 AVFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFSSF 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 SA Q L D L++ ++ + + E ++ + Sbjct: 246 SARIVQLSLIDTLYVNVMLRYKDTNEEILQKGKE 279 >UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8T9_9ACTO Length = 312 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 2/276 (0%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR LA S +K+ + +L P H S+ +L G SQ++V +F + +G + + L Sbjct: 28 IRTELPRLAGSLRKVGELILEDPAAVTHCSAAELGRRTGTSQATVTRFCRAIGLESYQHL 87 Query: 67 KLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + L++ + S I I DD L V + + + A+ T+ + L Sbjct: 88 LIELAQERGRGEVSDWGSAEIGPDISPDDSLERVVQVVGSADLRAIQQTIERIDLDALER 147 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 L ARRI + G+G SG VAQ +L +IG ++H + +P D+ + Sbjct: 148 AAQALAKARRIDVYGVGGSGAVAQETETRLFRIGCQVRGWTEVHGAATSAALLTPADVAI 207 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS++G RE + G +AIT + L + A L + E + + SI Sbjct: 208 GISHSGATRETLEPFEMAKERGATTIAITTDPRSPLAKAADIRLISATSETSFRTGSIGG 267 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 H+ M+ D L++ + Q + A + ++ + + Sbjct: 268 RHSVLMIVDCLYVRVGQVAYQRASASLALTDHITPQ 303 >UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9W4_9FIRM Length = 280 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL ++ Y L +++KK+ADY+ +S +LA E V+ +SV +F + +G K Sbjct: 5 NVLLSMQLSYNQLTRTEKKIADYVQKNAQKVLFMSITELAEECHVADASVHRFCRTIGAK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ LS + + + + ++++K + A+ T + +EK Sbjct: 65 GYQEFKMWLSINMGHEKGEEESEEEDGKEP------IFQQVLKSHLEAINETNQLLDKEK 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V ML AR+I+ G+G S A K + + D H + +D Sbjct: 119 VDQAVRMLTEARQIMFFGVGDSKTAAIEANNKFLHVTPKVMCAGDTHLQAMAASMMTEED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL +SY+G ++ A G KV++IT F + L + + L ++E S Sbjct: 179 LLFVVSYSGSTKDTVEVAQIAKEAGAKVISITRFLKSPLTEFSDCVLICGSKEGPLEGGS 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKKL 281 + A +Q + D+L+ + + + A E R + + A+V KL Sbjct: 239 MGAKLSQLHIIDILYQCYFKANGKKARENRQKTANAVVNKL 279 >UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8RRF4_9CLOT Length = 289 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 141/276 (51%), Gaps = 1/276 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RI++ + ++K + +L P+ A S +QLA++ S +++V+ +K+G+ Sbjct: 3 SVLVRIQEYSAQASGAEKGVLRFLRENPEEAAGYSIKQLADKTFSSAATIVRLCRKMGFD 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ +L A + ES + P+ +I+ DD L + K+ +N ++ T + + Sbjct: 63 GYKELQKSLLYESALRRES-TRPMEQEIKKDDSLEELVNKVTYKNIVSLDNTRKLVDLDI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L++CV +L ++ + L GIG+S LVA++ KL+++ D HA L + D Sbjct: 122 LNQCVELLDRSQTVYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIRSCD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L L +SY+G+ E+ A E V+ I+ F + L + A + L A E S + Sbjct: 182 LALIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFRSGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 +S+ +Q + D+L+ A + + + E+ R + Sbjct: 242 MSSRISQLNMIDILYTAYVHKRYDECMEQFRKTHIA 277 >UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUK3_9FIRM Length = 280 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 137/282 (48%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +I+ + + +++ + Y+L +++ +L +G S ++ +FA+K+GY Sbjct: 1 MSCITKIKSALESMTATEQMIGRYILEHRHEVLEMNTLELGWASGTSGAAWTRFAKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PALKL L++ + E P V + + D L + K + T + E Sbjct: 61 KGLPALKLDLAQD-RTDEEMPEVDLF--LDPRDTLGALLHKTQTILEQNLRRTYELIDEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + M+ SA R+ L GIG SG+V + KL +I RD H L+A + P Sbjct: 118 VLAQAIDMMASAHRLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHCMPG 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNS 239 D++L +SY+G +N A G K++AITG L A CL+ +E+ Sbjct: 178 DVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKEIRL 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+++ ++TDLL+ + Q+ E + + +++K+ Sbjct: 238 GSVTSRDGSLIVTDLLYYGVAQRQFHATKEHLVKTRKMIRKI 279 >UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=Gammaproteobacteria RepID=A0KFB6_AERHH Length = 286 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 101/284 (35%), Positives = 155/284 (54%), Gaps = 4/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +I L+ S+ K+ADY+L P+ H SSQ+LA +A VSQSS+VKF QK+G+ Sbjct: 1 MLTLSKISNIRSQLSPSELKIADYILACPEQVTHFSSQELAQQADVSQSSIVKFTQKIGF 60 Query: 61 KGFPALKLALSEALASQ---PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGF A KLA+SE L + ++N I DD L + +KL +E ++ T Sbjct: 61 KGFTAFKLAVSEDLGRKHAIKTDNVGDLYNGIGRDDDLETMAKKLAQEKINSIVETTQAL 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 L + ++ A R+ L GIG S L A++ +KL+KIG +D H ++ Q Sbjct: 121 DNATLARVLDVINQAGRVQLVGIGGSALTAKDLWYKLLKIGVTTLFAQDSHVQISIAQTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 P D+ L +SY+G R++ AA+ R G ++A+T F L+Q A L T+A+E Sbjct: 181 GPGDVQLVVSYSGASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENEL 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +SIS+ AQ +TD+LF+ L+Q+ + A I + + +L Sbjct: 241 RISSISSRTAQNTITDILFLGLVQRR-DEAWALIDGTRGAIDRL 283 >UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2G7_BEUC1 Length = 285 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+ R A S +++A+ +L +P + +LA++ S++++V+F + LG Sbjct: 1 MSIQSSIQSRLDQFAPSMRRVAEAILERPQVVLEKTISELASQCETSETTIVRFCRTLGL 60 Query: 61 KGFPALKLALSEALASQPESPSV--PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ L+L L+ + + I +D L + K+ +T + TL Sbjct: 61 TGYVQLRLELATEIGRENAQRGELGDHGADILAEDGLAAMAAKIAFTDTLGIEETLASLD 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E L V + +A R + G+G+SG A + KL +IG A D H + SS Sbjct: 121 IEHLERVVDAIDTAGRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPHDAVTAAALSS 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+ +A S++G RE + G + +A+T +AL + A L T E Sbjct: 181 PGDVAVAFSHSGATREALAFLATAGKHGARTVAVTNSAESALARAADIVLVTSVRETQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++++ AQ M+ D +F+ + Q+ + + ++ + A ++L Sbjct: 241 SGAMASRIAQLMIVDCIFVGVAQRRYDQTVDALKSTYAAAQEL 283 >UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n=3 Tax=Vibrionales RepID=A5L3V2_9GAMM Length = 282 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 162/281 (57%), Gaps = 1/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M G+ +++ L+ SD +A Y+L P + LSS +LA GVSQS++VKF+QK+GY Sbjct: 1 MKGIAKVKALLPKLSPSDSLVARYVLDHPQQVKQLSSPELAKAVGVSQSTIVKFSQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF +K+ L ++ S IH I D V EKL+ T ++ T+ +N E Sbjct: 61 KGFSEMKVKLYQSDMSYQPVSQRGIHGTITRKDSPDTVMEKLLASKTQSLERTVLLNEGE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L +L A +I ++G+GAS LVA++FA+KLMKIG A D H +A + + + Sbjct: 121 QLSNAADLLHLANKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPDAHIQIANAASLTEN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+AISY+G RE+ A KV+ I+ +P+AL + A L + A+E S+ Sbjct: 181 DVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKLISAADENHIRSS 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI+A +Q +TDLLFIAL QQ+ E A + I S++ V + Sbjct: 241 SITARDSQFYITDLLFIALTQQE-EQADQLIEQSKSAVAEF 280 >UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TJ91_CLOBB Length = 285 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 133/277 (48%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RI Y L ++KK+A Y+L P H S +LA + S+++V + KLGYK Sbjct: 8 GCLERITNIYSELKGAEKKVAQYVLENPKNIIHFSITELAEVSKASEATVFRLCSKLGYK 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK+ L+ ++ P I+ +++ +D ++ K++ N ++ +TL +N E Sbjct: 68 GYQDLKINLAGSVIE----PIDNIYEEVKENDDTYIIMRKIMSSNINSIESTLKINKTED 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + ++ +A++I+ G+G S +A + K ++ G + A D H + ++ D Sbjct: 124 LDKAIAIILNAKKIMFFGMGGSWTIANDAYHKFIRTGIDCVASCDSHWQVMFSSMANSGD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++A S +G +EL + + G K++AITG + L + + L E S + Sbjct: 184 AIIAFSNSGSNKELVENINLAKKRGIKIIAITGNEKSPLAKISDLHLIAYGNESMFRSEA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + M+ D L++ + + + + + Sbjct: 244 MESRLTSLMIVDWLYVGVAIKRKDKTLGNLERIRNGI 280 >UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI47_9CLOT Length = 285 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 73/275 (26%), Positives = 149/275 (54%), Gaps = 5/275 (1%) Query: 5 LRIRQRYQGLAQ-SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 LR++ + + ++ K+ +++ + H+S A GVS++++V++AQKLGYKG+ Sbjct: 10 LRVQSILPSINKKNEMKIYEFIEINRKEIIHMSVADAAEACGVSEAAIVRYAQKLGYKGY 69 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 A+K+++++ + P I+ Q+ D + + +K+ N ++ T +V S E + Sbjct: 70 QAMKISIAQDVIE----PGQQIYGQLSKGDTIPTIVDKIFDSNIQSLRDTSDVLSRENID 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V ++ RR++ G+G SG VA + K +KIG+ A A D + + D+L Sbjct: 126 EAVNLILGCRRLLFFGVGGSGCVAMDGQHKFLKIGYMAMAFTDSNLQAMAASVLTSRDVL 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A+S++G +++ +A D + G K +AIT + + + ++A LYT + E A NS ++S Sbjct: 186 VAVSHSGASKDILMAMDIAKQSGAKTIAITNYGKSPIVEKADVVLYTSSNETAFNSDALS 245 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A+ + D+L+I + + + + I + + Sbjct: 246 SRIAELTIIDMLYIGVSYKRYDESYANILKTRKAL 280 >UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BD8 Length = 265 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 3/260 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 LA Y++ + +LA + S +++ +F + L ++GF KL LS LA QP Sbjct: 2 LASYIVEHAHEVVSMGITELAERSQTSPATISRFCKSLHFQGFTDFKLKLSGELAKQPSE 61 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 S + I +PL + + + ++ T +N ++L + V+ L++AR+I L G+ Sbjct: 62 HS---YQDIVAGNPLSEIVSAIEANHLRSIADTTQLNDIKQLQQAVSALKNARQIDLYGV 118 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 SG+VAQ+F KL++IG + D H + + +D++ AISY+G E A Sbjct: 119 ATSGIVAQDFYQKLVRIGKRTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQALR 178 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 G +++T F N L + L+ E+ +++ AQ + D+LF +L+ Sbjct: 179 CAKERGAVTISLTKFGTNPLANLSDIRLFASTLEEGMRRGDMASRIAQLHVIDILFTSLV 238 Query: 261 QQDLELAPERIRHSEALVKK 280 ++ + R+ S LV+K Sbjct: 239 SEEFDELIPRLERSYQLVRK 258 >UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA31_9ACTN Length = 281 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 82/275 (29%), Positives = 143/275 (52%), Gaps = 2/275 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+R++Q + ++++L + +L P++ LS +LA A VS S++ + +KLG K Sbjct: 3 SLLVRLKQYRDNASPAERELIERILDDPESISGLSIHELAAYAFVSPSTITRLCKKLGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LA ES S I + D R EK+ ++N ++ +N E Sbjct: 63 GYKEFQHLLIYDLALLRESSSSKI-EDLAPTDTSRQTIEKVTRDNIDSLRLVEKLNDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 CV ++ AR I L G+GAS L A++ +KL++IG + + D H L S P+D Sbjct: 122 YEACVDLMSDARTINLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSGPED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNSA 240 L +AISY+G+ E+N+ GGKV+AITG + L ++A L + E SA Sbjct: 182 LSIAISYSGLTEEVNVCVGRARERGGKVIAITGSAFDSKLARQADEVLLVGSTEPLMRSA 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++++ Q + D+LF + + ++ E + ++ Sbjct: 242 AMASRIGQLGVIDILFKSFVNRNYARFSEVLEQNQ 276 >UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIQ0_CLOPH Length = 284 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 2/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 RI Y +S+K +AD++ P+ + S LA GV ++V +F + L Sbjct: 4 GIFARIESSYSKFTKSEKIVADFVFENPEKVLYTSITDLAEICGVGDTTVFRFCKALKLN 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ L++ +A + I+ + DD ++ + +K + + AA+ T + E Sbjct: 64 GYQEFKMFLAQDIAVRT-GSDYTINGSVSQDDDIQTICKKALAVDIAALTETFEGLNFEA 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V M+ +A ++ G+G+SG++A K M+I N + D H + S D Sbjct: 123 VTKVVDMISNANKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSSRD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + SY+G ++ A+ G KV++IT + + L + + + E + + Sbjct: 183 LAIIFSYSGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVVIPCGSNEGPLDGGA 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKKLV 282 S Q + D+L++ + + + + +E++ K++ Sbjct: 243 SSTSMVQFYILDILYLLYFTKHYHQSKLNKAKTTESISSKIL 284 >UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITC5_RHOCS Length = 280 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 5/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR GL +S++K+AD +L QP + S +LA++A VSQ +VV+F + +G G Sbjct: 1 MLDRIRSMRPGLRRSEQKIADIVLRQPHAVVNASVAELAHDADVSQPTVVRFCRSIGCSG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL L++ LA+ P P + +R DDP+ + KL+ + A+ N + + L Sbjct: 61 YQDFKLRLAQDLAAGPARP----EDAVRPDDPVAEIAAKLLNRSIGALTRLRNQLNPDAL 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L RR+ G GASG+VA + K ++G A D H P + Sbjct: 117 EAAVQVLTETRRLDCYGFGASGVVALDAQNKFFRLGLPVVAHTDSHVQAMAAALLGPQGV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LA+S +G REL + D L G +V+AIT + L RA+ L A E ++ + Sbjct: 177 ALAVSRSGRTRELLRSVDLALAGGARVIAITA-GGSPLAGRATVPLLVDAPEDSSPYTPM 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ A + D+L +A + + +R A ++ Sbjct: 236 TSRIAHLAVVDILQVATALRRGVHTGDPLRRPAAALR 272 >UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N1V0_9FIRM Length = 277 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I++ ++K +A Y+L S+Q L + G S +++++F++KLGY Sbjct: 1 MNSYAKIKEAQSSYTSTEKVIAKYILENAADVLKCSAQSLGEKTGTSAAAIIRFSKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK++L+++ +P I I +D + + +K + N + T + Sbjct: 61 NGFSELKMSLAQS----KRAPEEKIDFIIDENDDIVTLADKCCRLNMNTVLKTYQLIDTN 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L +A I L G+G S +VAQ+ KL +IG +D+H L ++ + + Sbjct: 117 QLDNAIKKLIAANTIYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESMNKE 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G + L A + +++IT F PN L + + L EE+ Sbjct: 177 DAALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEIRMG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ + ++TDLL+ + + DL +++ ++ +V K+ Sbjct: 237 AISSRISSLVMTDLLYYGVFKNDLTGNKDKLIETKRIVSKI 277 >UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=Gammaproteobacteria RepID=B4EZY5_PROMH Length = 295 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 126/278 (45%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + L + +++ADY+L P LS QL+ +++VV+F + LGYKG Sbjct: 14 ILDTLGAMKNSLTRVSQRIADYILFHPTEVTQLSIAQLSQATKAGEATVVRFCRTLGYKG 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+ L+ +A+ S + ++ D + +G KL + TLN+ +++ Sbjct: 74 FQDFKMDLAIEMATSDNDESPILDAEVSHQDDIHTIGLKLQATINNVLSETLNLLDMQQV 133 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V L SA + + G+G+SG+ A++ KLM+IG+ AV + H + D+ Sbjct: 134 QGAVNALLSANYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNHFMYMQASLLKSGDV 193 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS++G E A G +A+T + + + A H L + SI Sbjct: 194 AIGISHSGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHLINGNRQGKLQGDSI 253 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + DLL+ L+Q E E+ + +K+ Sbjct: 254 GTKTAQLFVLDLLYTLLVQAKPETVKEQKLRTLNALKQ 291 >UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=Bacteria RepID=A6LRF3_CLOB8 Length = 294 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 134/280 (47%), Gaps = 4/280 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +I+ Y L S+KK+ADY+LL + ++ +L+ + GVS+ ++++F + +G G+ Sbjct: 9 YKIKNMYNLLRSSEKKVADYVLLNGHSVSTMTLAELSRQVGVSEPTIIRFVKSIGCSGYS 68 Query: 65 ALKLALSEALASQPESPSVP----IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K+AL + + + I D+ + V K+I A+ TL + Sbjct: 69 EFKMALMKEWGRESVDKQYDSKLLVELHIDRDEKIEDVPVKMIGLTIKALEDTLKIIDIN 128 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K + + M+RS+ I + G+G SG VA + K ++IG A D + + + Sbjct: 129 KYKKAIEMIRSSNIIDVYGVGNSGSVASDIRNKFLRIGLECRAYSDSNIQQICASHLTSN 188 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + +S++G + A G + +A+T F A+ + A +T EE S Sbjct: 189 DLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYADITFFTGGEETTFYSE 248 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + +Q + D+L++ ++ D +L +R+ L+K+ Sbjct: 249 TMVSRISQLAIVDMLYMGILLDDYDLYTKRLEKINLLLKE 288 >UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C448 Length = 286 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 105/284 (36%), Positives = 162/284 (57%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I LA++ +K+A ++L P+ +LSSQQLA VSQS++VKF+QK+G Sbjct: 1 MTLLDIITYSLPRLAENQRKIAQFILENPENVLNLSSQQLAEILDVSQSAIVKFSQKVGV 60 Query: 61 KGFPALKLALSEALASQPESPSVP---IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KG+PALKLALSE + Q P +HN+I DD L +V +KL E ++ T + Sbjct: 61 KGYPALKLALSEIIGRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 ++ V + ++R+ + GIG SGL A++ ++KL KIG D H +A Sbjct: 121 DFKQFERIVERIDQSQRVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+ + IS+TG R+++ AA+ + G V+AIT + L Q A + L +IAEE Sbjct: 181 NTHDVQIVISFTGRRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+Q+ A + ++ ++ KL Sbjct: 241 RSSSISSRTAQNTLTDLIFMALLQRREAKAKSLVMNARVVINKL 284 >UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789683 Length = 289 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 142/280 (50%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I Y L +++KK+ADY+ P+ + L+ +AGV ++SV++F +KLG++ Sbjct: 12 NTLLMISSIYSSLTKTEKKVADYVKGFPEETVLATVTDLSEKAGVGETSVIRFCRKLGFR 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL++++ L +P S + I D L V KL ++ + TL++ + + Sbjct: 72 GFHEFKLSVAQDLVDRPPS---VVDTSIDEQDDLMTVARKLTMQHEILLKNTLDLVNADN 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ + G+G+SG+ A + ++LM++G N A RD H + + D Sbjct: 129 LRMAVDKLLAANKVYVYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVKKGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ AIS +G R+L A E + G V+ +TG + + A L + E T + Sbjct: 189 LVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ Q + ++L L + + + + + ++ KL Sbjct: 249 LATKFMQTYMLNILTTLLTMKKEDASESLKKTASSVADKL 288 >UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Clostridiales RepID=C2L140_9FIRM Length = 285 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +IR Y +++KK+ADY+L PD +S LA V +SV +F + + K Sbjct: 4 DFLTKIRSAYNQFTKAEKKVADYILQNPDQVLFMSISDLAETCKVGDTSVFRFCKTMNVK 63 Query: 62 GFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K+ LS ++ + ES N D+ + + K+++E ++ T ++ Sbjct: 64 GYQEFKMTLSLSMRGNGKESKEGDGGNVSLQDNNIAELAGKVLEETIDSIKETHSLLDFN 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E + L A+RI+ G+GAS L A K +I + L + Sbjct: 124 KVTEAMNALSKAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATMERG 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G R++ A G V++IT F + L L A + Sbjct: 184 DVAVIFSYSGATRDIVEIAKLAKESGATVVSITRFQKSELTDYTDILLLCGANVGSLQKG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S SA +Q L D+++ ++ E + + + +K Sbjct: 244 STSAEISQLFLVDIMYTEYYRRHYEYCNQILEKTTVAIK 282 >UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CKN4_PASMU Length = 286 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 111/283 (39%), Positives = 169/283 (59%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++++ Y L+ +++++AD++L P + SS+ LAN+ VSQS+++KF+QKLG Sbjct: 1 MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA 60 Query: 61 KGFPALKLALSEALASQ--PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F KLA+SEAL Q P V +H+ I D L + EKL E A+ +L++N+ Sbjct: 61 DKFSDFKLAISEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNA 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + V L A+RI L GIG S LVA++F +KL KIG D HA LA Q+ + Sbjct: 121 IPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+L IS++G RE+ LAA+ K++A+T T N L + A + LY++A+E Sbjct: 181 PQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SI++ AQ +TDLLF+ ++QQ E A + I S AL+ +L Sbjct: 241 SSSIASRTAQHAITDLLFMGILQQ-KEHANDLILESRALIGQL 282 >UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W838_ATOPD Length = 304 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 2/267 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 LR+ + + + +++ + DY+L P+ S +LA + S S+VV+ +KLG G+ Sbjct: 6 LRLEEYRKNASSAERDIIDYILSDPEAVVGQSIHKLAAQTYTSASTVVRLCKKLGCGGYK 65 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL LA +S + + I G D ++ EK+ +N +++ T+ + + + Sbjct: 66 EFQQALIYELAVSNKSNDIAVGGVIAG-DTTDVIIEKVTAKNISSLELTMQLLDAQVVDS 124 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+++ A I L G+GAS LVA++ KLM++ N D H+ L + S +DL + Sbjct: 125 VVSLMMQAHSICLFGMGASLLVARDLQLKLMRLNINCNLSDDYHSQLLYAKNMSREDLAI 184 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNSASIS 243 +SY+G+ RE A G KV++IT + L R+ + L E S ++S Sbjct: 185 VVSYSGLTREAIECAWIAKANGAKVISITRGGIDSELIHRSDYVLGVAETEHIMRSGAMS 244 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPER 270 + AQ + D LF A + ++ E + +R Sbjct: 245 SRIAQLNVVDALFAAYVNRNYEKSVKR 271 >UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDH7_9ACTO Length = 342 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 2/280 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L+R+R GL S++++A+ +L P L+ +LA S ++VV+F Q++GY Sbjct: 12 VLVRVRAALPGLRPSERRIAEAILDDPHATAGLTVAELAAACDTSTTTVVRFYQRIGYGR 71 Query: 63 FPALKLAL-SEALASQPESPSVPI-HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + L+L L EA Q E+ ++P I DD + + K+ T ++ T + + Sbjct: 72 YKDLRLDLTREATREQLETANLPAASGDIDRDDTIDDIIAKVAANETLSIADTAEILDRD 131 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L V + +ARR+ G+GASG V + KL +IG A + D A + Sbjct: 132 ALARAVDCVLNARRVDSFGVGASGFVGLDLQQKLTRIGRTALSWLDTDAAWSAAVTLDEQ 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + +AIS+TG G +AIT AL + A L T A E S Sbjct: 192 CVAIAISHTGTTAATVEFLAMAAAEGATTIAITNHDNTALAETADVVLTTAARETRFRSG 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + AQ M+ D LF + + + + +R + A V + Sbjct: 252 ALGSRIAQLMVVDCLFTGVARASYDASMSALRKTYAAVHR 291 >UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMQ5_CLOPH Length = 285 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++ R L S++K+A Y L + + +LA E+GVSQ + ++F + +G+ Sbjct: 3 NIEIKTRSIMDSLNNSERKVATYFLNNIENIFSIPIARLAEESGVSQVTWIRFCKAIGFD 62 Query: 62 GFPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK +L L +S E + I+ L + + A+ T+ + + Sbjct: 63 GLKDLKKSLFMELNSSTSEGIDTSDFSDIKKHSTLEQMCNTIRNTTLQAVEDTIKLIDYD 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L A I L G+GAS LVA +F KL++I N DMH L + P+ Sbjct: 123 TLKKVVSILSKASCIKLFGVGASALVADDFCKKLLRINKNVNFSYDMHTQLVYGANARPE 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G +E+ D + + IT +T + L A + +Y A E S Sbjct: 183 DVAVIFSYSGTTKEMLEIMDLAKKSNCPTIVITKYTKSPLVASADYSIYISAPEINYRSG 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++S+ AQ + DLLF +L ++ + + S + Sbjct: 243 AMSSRIAQLTIVDLLFTSLANKNYTSVEKYLEKSSEV 279 >UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n=22 Tax=Gammaproteobacteria RepID=A4TMJ1_YERPP Length = 292 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 129/278 (46%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + L +S +++A Y+L QP LS L+ ++++++F + LGYKG Sbjct: 13 ILDALGAMQNSLTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYKG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+ L+ +A++ S + + ++ D +G KL + TLN+ S E + Sbjct: 73 FQDFKMDLAIEVATRHNSENSLLDADVQEGDDTLAIGSKLQSAINNVLSETLNLLSIESV 132 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +LR A RI + G+G+SG+ A++ KLM+IG A + H + +P D+ Sbjct: 133 EQVVKVLRPADRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMNPGDV 192 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS++G E A G +A+T + + + A + L + SI Sbjct: 193 AIGISHSGTSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQGDSI 252 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + DL++ L++ D A R + V + Sbjct: 253 GTKIAQLFVLDLIYALLVKADPAQAESIKRKTTQAVSQ 290 >UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSK7_9FIRM Length = 282 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 119/274 (43%), Gaps = 4/274 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR R L +++K+A+Y+L D + + +LA A VS +SVV+F + LGYKG+ Sbjct: 10 IRGRMNYLTNTERKIANYVLENYDQVLNSNITELAENAKVSDASVVRFCRSLGYKGYQDF 69 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ ++ + + + ++ + D ++ K+ + + TL + ++ + Sbjct: 70 KINAAKDVLPREKH----LNPILEESDSPDMICHKIFNLEISVLERTLASLNMREVEKAA 125 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + +R++ G G S LV Q+ K MKIG D L + D+++ I Sbjct: 126 QFIFHGKRVLFFGSGGSLLVGQDALHKFMKIGVQVYVHEDRDLQLMASSLAGEGDVVIGI 185 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G + G + +A+ L + A + T +EE S S+S Sbjct: 186 SHSGSNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIADVVIDTASEETIFQSESVSTRI 245 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D L + + + + I+ + + Sbjct: 246 AQLAIIDSLVSIVAFMNYDESYRAIQKTRKATSE 279 >UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=Burkholderiaceae RepID=Q1LPJ6_RALME Length = 338 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 126/276 (45%), Gaps = 5/276 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI Y L S+++LADY+ + L+ +LA+ AGVSQ ++ +F LGY GF Sbjct: 3 DRILAVYDSLRPSERRLADYVARHGASVIRLTMPELADRAGVSQPTIARFCAALGYDGFK 62 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KL ++ + + +H + DD + K+ A + + N S +++ Sbjct: 63 EFKLQFAQNVG----GGTPFVHQDVEADDRPADIAGKVFDRTIATLMSVRNALSADQIEH 118 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + +L ARRI G G SG+VA + K ++G A D H + P D+ + Sbjct: 119 GIRLLAGARRIEFYGCGNSGIVALDIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGDVAV 178 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 +S +G ++ AA G VLA+T + L + A C+++ EE + +++ Sbjct: 179 LVSNSGRTWDMLTAATLARSSGASVLALTHSG-SPLARLADVCVFSDVEEDSEVYTPMTS 237 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +L D+L + + ++ ++A +++ Sbjct: 238 RICHLVLGDVLAAGVALDRADSVAAGLQRAKAHLRE 273 >UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9A2_9FIRM Length = 336 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 120/261 (45%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I ++Y L +S KKLADY+ ++LS LA +GVS++++ +F +KLG Sbjct: 55 NILDLITEQYPTLTRSGKKLADYIFANTTETQYLSISALAENSGVSEATITRFCRKLGLS 114 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLA++++ + I D L + +KL+ N ++ T ++ E++ Sbjct: 115 GYNDFKLAIAKSDHVTDMGEPSGSPSTITSQDSLPDIFQKLLSANILSLTETFDLLDEKE 174 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V +L A + G G+S ++A + + D H + ++ ++P D Sbjct: 175 ISRAVDLLYGAHHVYCLGNGSSSVMAMEAWARFSTASTRFIHIADSHMQMLSIALATPQD 234 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L SY+G R++ + + V+ +T F + A L E S S Sbjct: 235 VILFFSYSGATRDMEDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLCGYNESPLQSGS 294 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 I+A Q ++ D LF + Sbjct: 295 IAARMGQMLIIDCLFHGFCLK 315 >UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=Firmicutes RepID=A6LVH8_CLOB8 Length = 282 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y GL+ ++ +ADY+L P + H S L++E V+ S++ +FA+KLGY Sbjct: 4 SVRLKIKSLYNGLSAKEQNIADYILENPISVAHNSISYLSDELNVADSTLFQFAKKLGYS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ L + + IH +I DD + +K+ N + T + + Sbjct: 64 GFKEFKMAI---LIEENNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILGLDD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + ++ ++ + G+G SG++A++ K ++ + D H L +P D Sbjct: 121 LKKAAEIISNSNLLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLTPQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG +E A+ + G KV+ IT + L + +I+EE +S + Sbjct: 181 CAICISHTGKSKETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFISISEEIEFHSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ +Q + D L++ L+ + E + E + + Sbjct: 241 LSSRISQLSILDSLYVILMFMNKEKSKEALSKVRRTI 277 >UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulator ybbH n=7 Tax=Bacillaceae RepID=YBBH_BACSU Length = 283 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 76/281 (27%), Positives = 138/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 GL I+ L S++KLADY+L P A + +++ A S ++V++ + LG K Sbjct: 4 GGLAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ LA P+ + I +PL + EK A+ T ++ ++ Sbjct: 64 GFQDLKMRVAGDLAK----PTFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYKE 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V++L A + G+GASG+VA++ K ++I A A D H + + + + DD Sbjct: 120 LERAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKDD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 ++ AIS++G +E+ G +++T F+ ++ A LYT + E SA Sbjct: 180 IVFAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ + D+LF+ + + E I + A ++ + Sbjct: 240 ATSSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAAIQSM 280 >UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1J5_9FIRM Length = 282 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 4/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I + L +S+KK+A+Y+L P+ + +LA G S +S+V+F + G KG Sbjct: 6 FLQLIEDKLGTLTKSEKKIAEYILEHPNRVVDATITELAERIGTSDASIVRFCKLFGCKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K+ L+ + + +V + D + +K+ A ++ TL + + E L Sbjct: 66 YQNFKIRLAREVVPHYKQLNVALEQ----HDTALTICQKIFNTEIATLHETLEMLNVEHL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +R A I + G G S +VAQ+ K +K+G + D + D+ Sbjct: 122 QTMAQRIREADYIEVFGSGGSSVVAQDIRHKFLKVGIRCTVLLDADIQAMSASLLKKGDV 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG + + + G V+ +T + + + A + ++E S S Sbjct: 182 AIGISHTGSTKSVFHCLKMARKNGAYVILLTTQAKSPIGRIADLVIPVGSKETLFKSEST 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SA A+ ++ D + + D + +I + + Sbjct: 242 SARIAELVVMDAVLALAVSDDYKKYNVKITKTRDATSE 279 >UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQA6_9CLOT Length = 290 Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 131/278 (47%), Gaps = 4/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI+ Y L+ + KK+AD+++ PD A H++ QLA VS++SVV+F Q L Y Sbjct: 12 MGCTERIQATYSALSGASKKIADFVIDHPDQAVHMTVVQLAESCEVSEASVVRFCQCLQY 71 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF KL+L+ + S I I +D + EK+ A+ TL + + + Sbjct: 72 AGFYEFKLSLAAEIV----PASQMIQEDITVEDTEPTILEKVFAGEQQALQETLQMLNRQ 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 V + + ++ G + +AQ+ ++L++ G ++ D + L Sbjct: 128 DFISAVNHIAFSNKVEFFSCGNARPIAQDAHYRLLRTGIDSRIGIDDYDCLIHASMLRTG 187 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G + +E + G + ITG + + + C+ + ++E S Sbjct: 188 DVAIGISHSGSTKNTIKMLEEAKKNGATTICITGMEKAPITRVSDICMVSHSKETMFRSM 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++ AQ + D L +A+ + E + + + ++ ++ Sbjct: 248 AMASRIAQMAIIDALVVAVSFKRFERSKQYLTLTDKIL 285 >UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AZQ1_ENTCA Length = 283 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y+ L+ ++ +ADY+L P H S L+NE G++ S+ +F +KLGY Sbjct: 4 SIRLQIKTLYKDLSLKEQAIADYILENPSKVSHSSISDLSNELGIADSTFFQFTKKLGYN 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ L + + ++ IH I+ D + +K+ N + T N+ EE Sbjct: 64 GFKDFKMAM---LMQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLKEED 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L M+ ++R+ G+G S +VA + K ++ D H L +PDD Sbjct: 121 LKLAAAMINQSKRLFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLTPDD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG RE A G K++ IT + L + +I+EE S + Sbjct: 181 CGIFISHTGKSRETIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +++ AQ + D L++ L+ + + A + I + K+ Sbjct: 241 LASRIAQLSIMDSLYVILMFINRDKAQQSIAKIRRSISKI 280 >UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A5_9CLOT Length = 282 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 134/276 (48%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R Y+ L+ ++ ++ +Y+L P + +LA E+ S ++VV+ +K+ Sbjct: 6 MSVLIKLRD-YRNLSAAENQVREYILKYPKKVLEYTVYELAKESFTSPATVVRLCKKIDI 64 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF LK+ L+E Q ++ I +D + EK+ + T + +E Sbjct: 65 KGFARLKVLLAEETKYFQDMKLNLLDTTTIEKNDSPHAIIEKITNIAVKTIEETRVLVNE 124 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ + +L+ A + G+GAS VA + +K M+IG N + S Sbjct: 125 KQFMQVARLLQKAVIVDFYGVGASSPVAIDAQYKFMRIGKNVITYQLYDRQYVQAVNSDA 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + ISY+G +E+ A + + G V+A+T N+L + A + L+ A+E S Sbjct: 185 SHVGIIISYSGETKEMLKIAGILQKNGTPVVAVTSSGENSLNRIADYNLFVTAKETVFRS 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++++ AQ + D+L+ D + + ++I+ + Sbjct: 245 GAMASRTAQLYIIDILYALYCSLDYDESIKKIQQTR 280 >UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJ20_EXIS2 Length = 284 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 +I ++ L S +K+AD++L + ++ LA E+G S ++VV+F + LG K Sbjct: 4 GIFSQISAVHEELPSSSRKVADFVLAHMNEIAGMTIHHLAEESGTSAAAVVRFCRALGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++ +S A + ++ I ++ + EK + + A+ T SE++ Sbjct: 64 GYPELRMRISADTARTD----LKGYHDIEKNERPADLVEKTVSNSIQALQDTAKQLSEDR 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E +L AR I GIGAS +VA + A K ++G D H + + +S DD Sbjct: 120 IAEAADVLDQARAIYFYGIGASNVVALDAAQKWTRVGKLTIQESDQHLVATILANASQDD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + AISY+G E+ G KV+++T F N + Q A L+T A E SA Sbjct: 180 VFFAISYSGETEEVVELIRLAKIRGLKVISLTRFGDNRVSQLADIALWTSRAPEAPLRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ AQ D+LF++ + ER++++ VK L Sbjct: 240 ALSSRLAQLFAIDVLFLSYAAVHYDDTIERLQYTRESVKML 280 >UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=A1AYM0_PARDP Length = 287 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 136/274 (49%), Gaps = 4/274 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR + L + ++ D + + D + +Q++ +AGVS + VVK A+KLG+ GF Sbjct: 12 AQIRMKLPFLTPLEARVVDTITGRNDLDLTTALRQVSEDAGVSDAMVVKIAKKLGFNGFR 71 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + EAL ++ +H++I +D + K+ + + A+ T+++ Sbjct: 72 DFR----EALVVYRQTDVASLHSEISPEDSSADIIRKVFQTSIQALEETMSIIDVSAFDR 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 T+L AR+ G+G S +A++ A K ++IG A D H +L + P+D+++ Sbjct: 128 AATLLHGARQRDFYGVGGSAQIARDVAHKFLRIGLRAGVQDDPHMMLMSAALLGPEDVVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S++G + AA + G +V+AIT + L + A L + A+ + +A Sbjct: 188 AFSHSGTTSNVIEAARLARQQGARVIAITNYATAPLSELADIALCSTAQGSPLLGENAAA 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 AQ + D +F+A+ Q+DLE A ++ + V Sbjct: 248 RIAQLNIMDAIFVAVAQRDLERAEAQLARTRNAV 281 >UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=D1YCB1_PROAC Length = 290 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 2/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI + ++ ++A +L +PD S+ QLA AGVS ++VV+F + LG Sbjct: 4 SLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMS 63 Query: 62 GFPALKLALSEALASQ--PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ L+ L+ L+ + S I DD L + K+ + T Sbjct: 64 GYRELRTELARDLSRRTLELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDA 123 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + + A R L G+G+SGLVA + + KL +IG +D H L Sbjct: 124 DELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKR 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L IS++G +E+ A + G +A+TG + + + A H L T A E + Sbjct: 184 PCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRA 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++S+ AQ + D LF + Q ++ + + V Sbjct: 244 GAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAV 282 >UniRef50_B9K581 Transcriptional repressor of rpiB expression; transcriptional repressor of ribose catabolism (RpiR/YebK family) n=3 Tax=Proteobacteria RepID=B9K581_AGRVS Length = 291 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 4/274 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR L + K+ D + D + S +Q+A AGVS++ VVK +KLG+ GF Sbjct: 14 RIRMMMPMLTPLEAKVVDTVFGMRDFSEETSLKQIAENAGVSEAMVVKITKKLGFSGFRD 73 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + ++S+ P+ +H ++ DD + +K+ + + A+ TL + + Sbjct: 74 FRSSVSQY----NRQPTTEMHQELSVDDTSLEIVQKVFRTSIHALEETLAILDMAAFDQA 129 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 M+ AR G+G S +A++ A K ++IG A+ D H +L + + D+ + Sbjct: 130 ADMIHKARNRDFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDVAIG 189 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S++G + A + G +A+T + +AL Q A L + A+ + +A Sbjct: 190 FSHSGNTIAVIEALQLARKNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGENAAAR 249 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AQ + D +F+A+ Q+D + A + + + V Sbjct: 250 IAQLNILDAIFVAVAQRDYQAAERNLDRTMSAVT 283 >UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n=4 Tax=Firmicutes RepID=A8FIY5_BACP2 Length = 286 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 140/279 (50%), Gaps = 3/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR + L+ + KK+A+Y+L P S LA+E S++++ +F +K+GY+ Sbjct: 8 NIFSHIRTTFHSLSPTQKKIANYILENPQKVVLHSISALASECNTSETTIFRFLRKIGYE 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + ++ +++ +A+ + I+ +I D + + K+I+ T ++ ++ + Sbjct: 68 SYQVFRVHVAQDIAT---NTPQSIYGEIEASDSVADIKHKVIELTTNSIQDMKHIVEDHA 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ A + + G GAS +A + K +++GF+ + D H + ++ D Sbjct: 125 VTQFIEQMKQAHKTVFFGAGASSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHATEHD 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++AIS++G RE+ A G K+ +IT + + L +R+ L + + E S S Sbjct: 185 FIVAISHSGESREILDAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYRSDS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q ++ D+L++A + + A E ++ S V K Sbjct: 245 MISRINQLVIIDVLYVAAVLELGSNAIENVKRSRLAVAK 283 >UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZR0_ERYRH Length = 280 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 141/281 (50%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ ++K++A+Y+L D + SSQ A E S +++V+F++K+GY Sbjct: 1 MSCIYRIKENMHTYTDTEKRIAEYILENKDEVVNFSSQHFAKEINSSAAAIVRFSKKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + + +S I+ +D + + K N T + + E Sbjct: 61 NGFTHLKVELARDHSEEEQS----FDKLIKEEDTIETMVRKSHYSNHRTFDNTYKLLNLE 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +ARRI L GIG SG+V Q+ K ++I + D H ++++ + + Sbjct: 117 VLDASIAAISNARRIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHITEN 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+SY+G RE+ +A G +AIT N L + + + EE Sbjct: 177 DVTIALSYSGQTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEVRLG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI++ + ++DLL++ + + ++E +I ++ +K + Sbjct: 237 SIASRFSMLAISDLLYLGVAKNNIEETRRKIVNTRDTIKSI 277 >UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax=Enterobacteriaceae RepID=MURR_SALAR Length = 287 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 95/284 (33%), Positives = 158/284 (55%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++R ++++K+A +LL + +SS+ +A + +SQSS+VKFAQKLG Sbjct: 1 MLYLAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGA 60 Query: 61 KGFPALKLALSEALA---SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 GF L++AL E + + +V +H+ I +D L ++ KL +E A+ T N+ Sbjct: 61 NGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLM 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E+L + + ++ A I +TG+G S LV ++ ++KLMKIGF A D H QA Sbjct: 121 DYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQAL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A + L T++ E Sbjct: 181 RQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLADYTLDTVSGETEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+S+S AQ +TDLLF+ ++Q + + I S L+ L Sbjct: 241 RSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIERSSELITLL 284 >UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=Q2G836_NOVAD Length = 296 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 73/273 (26%), Positives = 133/273 (48%), Gaps = 4/273 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RIR ++++ K+A Y++ P +S LA S+ SV+ F + +G Sbjct: 19 NALTRIRSALPQMSKTAAKIAAYVVEHPADVVGMSITDLAALVDASEGSVINFCRSIGLG 78 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH + +D V K+ A+ +L+V + Sbjct: 79 GFQHLKLSLAQEIV----QPVHFIHEDLEREDSTETVCRKVFHSGIQALRDSLSVLDPKA 134 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++R+ARR+ + GIG+S +A++ ++L++IG +A V D H + D Sbjct: 135 MAAAVDIIRAARRVEIYGIGSSAPIAEDAHYRLLRIGLDARVVIDSHVQAISASRCDKDV 194 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G + + IT F + +Q A L+T+A E + + Sbjct: 195 AVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYADVVLFTMARETRFRTEA 254 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 +++ AQ + D L AL D + + + ++ + Sbjct: 255 MTSRIAQLCVIDALIAALALADYDRSTDVLKQT 287 >UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=Clostridium RepID=A6LUR0_CLOB8 Length = 281 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 73/282 (25%), Positives = 140/282 (49%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y +K +ADYL+ + +S++ +A S +VV+FA+K+G+ Sbjct: 1 MNVLQYIKQNYDSFTDREKLIADYLIETKERIISMSARDIAEATKTSAPTVVRFAKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 LKL LS ++ + E+ ++ + D + + + + + M T+++ EE Sbjct: 61 NTLNELKLKLSINISKEEEAGAIQFQY-LDNDLGTKNIIYGIKQSVDSIMEQTVSLLDEE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +L SA+ I + +G SGLV Q+F +KL ++ D H + + Sbjct: 120 CLDKAIELLISAKNIYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTHLQITSSVLLEEG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNS 239 D+ LAISY+G +E+ V+AIT + N + + + A E++ Sbjct: 180 DVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKSIRE 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q + D+L+I +I+ +++ E++ + VK+L Sbjct: 240 GAISSRISQLAIIDMLYIGMIRNNIKEVEEKLISTRKAVKEL 281 >UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALE3_SEBTE Length = 282 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 136/278 (48%), Gaps = 2/278 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I + S+ K+ +Y+ P++ ++ ++L+N ++++++F +K G+K Sbjct: 7 NLFNKINSLKKSFTASETKVFNYIEKNPESVVRMNIRELSNAIDTGETTIIRFCKKTGFK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K++L +L+ + +S I I D+ + E + + + TL++ + E Sbjct: 67 GYNDFKISLISSLSKEKQSNKYKI--DILADENYNSIAEGIYNNSFNVLKDTLSLINNEI 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +C+ ++ +A+ I GIG S L AQ+ +K ++IG + A+ D H S +D Sbjct: 125 LDKCINLINNAKHIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPHLFKMAASISDRED 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS TG RE+ + G K +AIT + + A + L E+ + S Sbjct: 185 VIIGISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVLLNGFNEELLETGS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S +Q + +LL++ ++ ++ + A E + V Sbjct: 245 FSERISQLFIIELLYLGVLSKNKDKAMELKDLTIKAVT 282 >UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EAC5_9ACTN Length = 283 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 2/260 (0%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + +++ + Y+ P LS + LA+ S SS+++F ++LG+ G+ + L L Sbjct: 17 SPAERNVIAYVSAHPHEVVGLSVRGLADVTFSSPSSILRFCKRLGFAGYKEFQRELIAEL 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 A + V + I DD + + K++K N + AT L C L+ AR Sbjct: 77 ALLGDKKDVAL-EDISMDDSVERIVGKVMKSNVRTIEATARTLDYTVLERCAARLKRARA 135 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + L GIGAS LVA + A KLM++ D H L + D+ +A SY+G+ +E Sbjct: 136 VNLFGIGASRLVAHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGLTQE 195 Query: 195 LNLAADEMLRVGGKVLAITGF-TPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + E R V+A+T + L A L A E S ++++ AQ M+ D Sbjct: 196 VLDCTAEAQRHNCPVVAVTKVDGSSKLATMADAVLGVAASEPLVRSGAMASRMAQLMVVD 255 Query: 254 LLFIALIQQDLELAPERIRH 273 L+ A + D E A I+ Sbjct: 256 ALYAAYVASDYERATHVIKQ 275 >UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I531_9CLOT Length = 284 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 135/272 (49%), Gaps = 1/272 (0%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L +++ K+ DY+ +++ +++ ++AN GV +++V +F +KLG++ F K+ + Sbjct: 9 RSELTKAENKICDYIEEYMNSSIYMTVTEIANNCGVGEATVTRFCRKLGFRSFLEFKMTM 68 Query: 71 SEALASQPESPSVPIHNQI-RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 ++ + I +++ +D L +K + N ++ TL + E +L Sbjct: 69 AQEFKNSGYDNEDIIESEVVSENDSLGEFVKKFYEINVNSLEETLKKIDYSMIEEISDIL 128 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 A+RI TG+G SG++A++ +K MKIG RD H L+ D+L IS + Sbjct: 129 VKAKRISFTGVGHSGIIAEDAYYKFMKIGLICNCYRDSHTLVMMASLMKEGDVLFIISNS 188 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E+N+AA+ KV++IT + L + + + L +E + S +Q Sbjct: 189 GNTEEINIAAEIARENNVKVISITENLLSKLARVSDYVLNYTDQEIKIDMESFGIRISQN 248 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L DL+ +I+++ E+A +E ++KL Sbjct: 249 FLIDLICTNVIRKNKEIAVVSKSKTEKAIEKL 280 >UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWE9_9CLOT Length = 301 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 4/274 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+ ++ L++ + + A+Y+ + + S LA AG S+++V + KLGY+GF Sbjct: 27 DRVEEKRGSLSKKELETAEYMAAHQEQLIYSSITDLAERAGSSEATVTRVCGKLGYRGFQ 86 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 ALK+ ++ L +P IH + D P ++ EK+ + T + + + Sbjct: 87 ALKVGVARELT----TPQEKIHENLEADSPAEVIIEKIFSSAIETLSMTQKSINVKAVAA 142 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + L ARRII+ G G S +A + K +++ NA A D H + V + + D+LL Sbjct: 143 SIDALCRARRIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMTDQDVLL 202 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AISY+G R + AA + G V+++T + + + A CL T ++E + +IS+ Sbjct: 203 AISYSGSSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTYSQETRYRTYAISS 262 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A+ + D ++ + + + A E + Sbjct: 263 RMAELTIIDTIYTGVALRLGDKAIANFEALERAL 296 >UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enterobacteriaceae RepID=A1JQZ2_YERE8 Length = 286 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 104/284 (36%), Positives = 168/284 (59%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I LA++ KK+A +L P++ +SS Q A +AGVSQS++VKF+QK+G Sbjct: 1 MSILNEITWLLPELAENQKKIAKCILDNPESILSISSSQFAEDAGVSQSAIVKFSQKIGM 60 Query: 61 KGFPALKLALSEALASQPESPSVP---IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGFPALK+A+SE L+ S P +HN I +D L ++ +KL E TA++ T Sbjct: 61 KGFPALKIAISEELSRNNLFKSYPHKALHNSISPEDSLMVMAQKLAHEKTASIMETTRKI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + V+++ +A+R+ + GI +GL A++ ++KL KIG D+H +A Sbjct: 121 NFSVFQQVVSLINAAQRVQIVGIWGAGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +P D+ + +S+TG R+++ +AA G V+AITG + L + A + L +I++E Sbjct: 181 TPKDVQIVLSFTGRRKDMKIAATVAKAQGATVIAITGSKVSPLAKIADYVLESISDENEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+QQ E+A I ++ + L Sbjct: 241 RSSSISSRTAQNTLTDLIFLALMQQRKEMAKPLILNASMTINNL 284 >UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9S0_9ACTN Length = 282 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 128/272 (47%), Gaps = 2/272 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+ +++ ++ S++++ Y+L +P+ ++ +LA VS +++ + +KL Sbjct: 5 SLLVLLKENKDRVSTSEQQIITYILKKPEAIVGVTIHELAQMTFVSAATISRLLRKLSLG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LAS S I I D + + K++++ ++ T +N+ + Sbjct: 65 GYKEFQQYLIYELASMKTSRQSSI-EDINPKDSTKQIMFKIMRKTIESITLTEKLNNPKT 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + C ++ +AR I + G+G+S L AQ+ +K ++ + D H L S D Sbjct: 124 IDSCAELIHNARHITIFGMGSSLLSAQDLQYKFLRANIDCTLSADWHMQLIAANNMSDGD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA-LQQRASHCLYTIAEEQATNSA 240 + +A SY+GV E GGKV+AIT + L + A LY + E S+ Sbjct: 184 VAIAFSYSGVTPETLRCVHAAQDHGGKVIAITRSVNSTELVRHADIVLYVASTEPLLRSS 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + ++ Q M+ D LF L+ + ++ I Sbjct: 244 AGTSRITQLMIVDTLFSTLVNKHYDVYATAIE 275 >UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04DU1_OENOB Length = 282 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR Y+ L +K++ADY+L D+ + Q L+++ G+S +S+ +F + LGY Sbjct: 3 NVTETIRSYYEKLHPGEKRIADYILSHQDSVMDATIQSLSDKIGISTASISRFTRHLGYP 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +ALS + ++ S +I+ D + +KL AA+ AT + + Sbjct: 63 NFRDFLIALSAS----KKNSSSDFFTEIKQSDQSEQIVKKLFSAGIAALTATAANINMKD 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L S+ +I GIG S +VA N K ++ N + D + + +D Sbjct: 119 LDRVVDWLVSSNKIGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTSED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + IS++G ++ L +++ G K++AIT F + + + A L + +EE S Sbjct: 179 LGIVISHSGRNQDTLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEEVNFRQES 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + E + I ++++ Sbjct: 239 MSSLVAQITIIDTLFTLVGHRLNEQTDQVINSMRRVIEQ 277 >UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseriaceae RepID=D0W145_NEICI Length = 315 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 4/275 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A + VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLADLSGAERKVAECALAKPKWFVHAAVAEIAEHSSVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ + +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIGHE---GMPYVHEELNADDDMSSVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S +D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSSEDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G ++A+T + L Q A L +E A + Sbjct: 178 LIAISNTGSSIELLDAVSIAKENGASIIALTRN-ESPLAQMADCVLSIATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + Q + D+L I L + + A +++ S+ Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKA 271 >UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n=48 Tax=Gammaproteobacteria RepID=B5FDJ7_VIBFM Length = 283 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 167/283 (59%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + L+ + K+ D++L P + SSQ LA + GVSQSS+VK Q+LG+ Sbjct: 1 MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSSIVKLTQRLGF 60 Query: 61 KGFPALKLALSEALASQPE--SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 KGF A KLA+ E L + P PIHN+I DD + +KL++E T A+ AT N + Sbjct: 61 KGFTAFKLAIIEDLGRKQAILEPERPIHNKINSDDSSLTIAQKLVQEKTHALIATTNAIN 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + T+L A+RI + GIG S L A++ A+KL+KIG A +D H +AT + Sbjct: 121 FSEFELVTTLLNQAQRIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATANTLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + ISY+G R+E+ +AA + G V+A+T + L++ A+ C+ TIA+E+ Sbjct: 181 KQDVQIVISYSGSRKEILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ ++TDLLF+ L+Q + A I + + ++ Sbjct: 241 SSSISSRTAQNVITDLLFMTLLQIKSDKAKLLIDEISSTMNRI 283 >UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=cellular organisms RepID=Q1QSE2_CHRSD Length = 289 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 5/270 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R+R + +S++K+A ++L P+ H+ LA EA VS+ +VV+F + LG G Sbjct: 5 LFDEMRRRMEHFRRSEQKVARFVLRHPEDVIHMRIVDLATEAKVSEPTVVRFCRALGCNG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F KL L++ LA+ + +++ D + + + + + L Sbjct: 65 FQDFKLKLAQMLATGSQFAQFSMNDS----DSVAEFAHNIFDSTVGTLLSVRDRLDHAAL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + VT L A R+ G GASG VA + K ++ + AA D H + +P D+ Sbjct: 121 GKAVTALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTAAYTDPHMQNMSAVTLTPRDV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS TG R L + G V+ + + + L + LY E + Sbjct: 181 VVAISQTGRTRALVASVRLARETGATVIGL-CPSDSPLASEVTLPLYIDVHEDTEIYTPM 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIR 272 S+ A ++ D+L + + + E+++ Sbjct: 240 SSRVAHLVIIDVLAVGVAKTRGPKLAEQLK 269 >UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=Bacillales RepID=C4KZ09_EXISA Length = 301 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I + + +KK+ADY+L ++++++LA + VS++S+V+FA+ +G Sbjct: 22 SLLTKIDLAKEDMTAVEKKIADYILSHSTLIPNMTTKELAQKTDVSEASIVRFARVVGID 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F A KLAL + LA + + N ++ D +K+I N AA+ A + + Sbjct: 82 SFKAFKLALVKDLAVTETT--LTDFNVLQQKDTPYDSFQKVIHVNKAAIEACAEAMDKRE 139 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+I G+G S A + +K K+G+ A D H +L+ + D Sbjct: 140 LEHAVDLFARASRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPHLGKSD 199 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS +G +++ + V+AIT + L + A L T E AS Sbjct: 200 VFVAISTSGRTKDVLELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPNVESDFRIAS 259 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ Q + D L++ L+ + E +R + + KL Sbjct: 260 IASRMTQLTIIDTLYMGLLHRKGEGLIDRYAEARDEMVKL 299 >UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment) n=3 Tax=Lactobacillus RepID=C2D3P4_LACBR Length = 281 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 3/273 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 ++Q + L++++KK+A Y++ P A + + LA S +SV + + LGY F Sbjct: 8 LKQSFDNLSRTNKKIAKYVIDNPQAASEANIEDLAAVTETSTASVSRLVKTLGYSNFREF 67 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 L+L+ +Q ++PI I +D L + +K+ + A+ T E + V Sbjct: 68 TLSLA---YTQLRPQNLPIFKDIDANDTLSTIADKIFTSSQRALQDTREGIDENEFARSV 124 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + RR+ G+G S + A + K ++ + D L DD + + Sbjct: 125 LRIIHCRRLGFFGLGGSSVAALDGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDDCAIVV 184 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G R+ A+ + R V+AIT + + L + + ++E S + + Sbjct: 185 SHSGKNRQTIKIAETLKRRKVPVIAITSYQDSPLVGHSDITFISSSDESNYRSEGMYSLL 244 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AQ + D LF+ + + IR + +++ Sbjct: 245 AQLTIIDTLFMMATVRMGPATEDTIRSVQNIIE 277 >UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator n=24 Tax=Neisseria RepID=A9M040_NEIM0 Length = 282 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A A VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ + +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIGHE---GMPYVHEELNADDDMASVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G V+A+T + L Q A L +E A + Sbjct: 178 LVAISNTGSSIELLDAVSIAKENGASVIALTRN-DSPLAQLADCVLSVATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + Q + D+L I L + + A +++ S+ + Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSI 272 >UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C511 Length = 286 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 137/275 (49%), Gaps = 5/275 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +RI++ ++K +A+Y+L S+Q L + S +++++F++K+G+ Sbjct: 9 MNAYIRIKEYNDSYTATEKLIAEYILEN--DILQDSAQALGEKTNTSAAAIIRFSKKIGF 66 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK+ L+++ + + I +D + + EK + N + T + + + Sbjct: 67 KGFSDLKMNLAQSTKEEKQQEVDLI---FEPEDNISTLVEKGCRLNMNTVLKTYQLINID 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E + +L +A I L G+G S ++ + KLM+IG D+H + Q+ + Sbjct: 124 TLEESIDLLNNASTIYLFGVGGSSVIGLDIYQKLMRIGKKVIYNADLHVQMTFAQSMDQN 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G L A + V++IT N + + +++ L +EE+A Sbjct: 184 DAALIISYSGSTTGLVDVARVLHEKQIPVISITQINANPISKLSTYSLKVPSEEKALRIG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++S+ + ++TDLL+ + +++ E + + S+ Sbjct: 244 AVSSRISSFVITDLLYYGVFKKNFEEHKKNLIDSK 278 >UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU Length = 291 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 4/276 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + S+K +A Y+L + +LS ++LA + S +++V+ +KLG Sbjct: 1 MSIMTQLEFELD-FSSSEKTIAKYILDNGEDILNLSVKELAKQTYTSPATIVRLCRKLGL 59 Query: 61 KGFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ S L + V ++ D + ++ + A+ TLN+ Sbjct: 60 NGYGDFKIKYSAELQFDKKNKKRVDVNFPFGNTDSNSQIAYRIANLHQEAIEDTLNLVDF 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L ARRI L G G S L +F K+M+IG SP Sbjct: 120 KNLDKIINLLDQARRIYLFGNGNSLLAGFDFQHKMMRIGKMVEMRAHAGEQGFLSYTCSP 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 DD+ + ISY+G E+ A + ++ +L IT N L + ++ + T + E+ Sbjct: 180 DDVAILISYSGETNEMVELAKFLKKMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIFSK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELA-PERIRH 273 A S+ + L DL+F + + + + E+I Sbjct: 240 IAPYSSKTSISYLLDLIFSCIFRLNYDHYINEKINR 275 >UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHI8_9LACT Length = 281 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 137/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +I+ ++D+ +A+++ + ++++L + S ++ V+F++K+GY Sbjct: 1 MSVLYKIKSSMSAFTETDRSIAEFVFVNRQVVLESNAKELGDMTKTSAAAWVRFSKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PA K+AL++ +Q + I + D L + +K T + T ++ Sbjct: 61 KGLPAFKVALAKE--TQSYTNEDDIETFLNPQDSLMGLLQKTENMLTQNIRETFSLLDYH 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + + A+ + L G+G S +V +F K+ +I N RD+H L+ + + Sbjct: 119 ALEKAIEFIHEAKTVFLLGVGGSSIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQLDKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNS 239 D++L ISY G +N A +G +++ +T + + L + L+ EE+ Sbjct: 179 DVVLVISYNGETESVNSIAKVAKTMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKEIRL 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SI++ ++ +TDLL+ + + D + + + + +K+ Sbjct: 239 GSITSRNSLLTITDLLYYGIAKTDFNVTKDLLVRTRQFIKE 279 >UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=Gammaproteobacteria RepID=C4L7F8_TOLAT Length = 292 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 141/277 (50%), Gaps = 4/277 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR GL+ +++++A++LL + + S + +A + VS+ +VK ++KLG+ GF Sbjct: 13 AKIRMALPGLSNTERQIAEWLLAKGNVESKTSIKSVAEQLEVSEPLIVKLSKKLGFAGFR 72 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+ AL E L+S P + +I D + V K+ + AM +V + Sbjct: 73 ELRQALVEYLSSLP----IDSEQEIEPTDSVESVLNKVFANSIQAMKEARSVADPILIAN 128 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ +A+ +++ G+G S V Q+F KL++IG + A D H +L +D+++ Sbjct: 129 AAQLIFNAKNVVIFGVGGSAAVCQDFEHKLLRIGILSRAYSDFHMMLMVSSQLDENDVIV 188 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G REL A + + +V+ IT +AL Q A + +++ A+ + A Sbjct: 189 VISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQLADYAIFSPAKGGILLGQNAVA 248 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q L D+LFIA++ QD + E++ +V+ L Sbjct: 249 RIVQLNLLDVLFIAILLQDHDKNREKLTRGSRVVRHL 285 >UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=Shigella flexneri 2002017 RepID=D2AGN5_SHIF2 Length = 333 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 92/265 (34%), Positives = 150/265 (56%), Gaps = 3/265 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +IR +++K+AD+L + + +SS+Q+A + G+SQSS+VKFAQKLG Sbjct: 68 MLYLTKIRNAESEFTGNEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGA 127 Query: 61 KGFPALKLALSEALASQPESPSVP---IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 +GF L++AL ++ E + +H+ I DD L ++ KL +E A+ T + Sbjct: 128 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALF 187 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +L + + ++ A I +TG+G S LV ++ ++KLMKIG+ A D H QA Sbjct: 188 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 247 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A L T++ E Sbjct: 248 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW 307 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 S+S+S AQ +TDLLF+ L+Q Sbjct: 308 RSSSMSTRTAQNSVTDLLFVGLVQH 332 >UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3D9_THELT Length = 276 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 13/278 (4%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I+ + + + +LA +++ PD H+S ++ +E + Q +VV+F QKLG+ GF Sbjct: 9 IKANQKQFTKKENELAQFVIDHPDEVIHMSITEIVDELRIGQGTVVRFCQKLGFSGFHPF 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN--SEEKLHE 124 K+AL+++L Q E+ D L +V E ++ A+ T + +E+ +++ Sbjct: 69 KIALAKSLGRQEEASE-------GSKDMLAMVKE----DHIKAIEETSKLLKLNEKVVYQ 117 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 C + + RR+ L G+GASG+ A + +K M+IG + + D H ++ + D ++ Sbjct: 118 CAEKISNCRRLYLLGVGASGVTALDAYYKFMRIGVDVKYMLDPHFQAMSLSGCNEKDCVV 177 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S +G + A + V+A+TG+ + L A L T E S +I + Sbjct: 178 AFSQSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTFYADFVLLTAVRENPFQSGAIRS 237 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 AQ + ++LF + A + + + V+K + Sbjct: 238 KIAQLHVLEVLFEQTKLLLADKAKQNVDRTARSVEKWI 275 >UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=Burkholderiaceae RepID=Q3JNN8_BURP1 Length = 339 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L S++KLAD++L P LS +LA AG SQ ++ +F Q LG G Sbjct: 8 MLPRIETIRAQLRPSERKLADFVLAAPREVLDLSMTELAARAGASQPTIARFCQALGCSG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+ L++++A ++ + D+ + K+ A+ N S + Sbjct: 68 FREFKIRLAQSVA----PGVASVYRDVEPDERAPGIIGKVFDRTIGALIEVRNSLSATSV 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + +L A RI G G SG+ AQ+ K ++G + A D H + +D+ Sbjct: 124 AEAIELLTRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVAYSDPHTFSMSAALLGANDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS TG R++ AA L G KV++IT + + L Q ++ L + E+ + + Sbjct: 184 VVAISNTGRTRDIVDAARAALACGAKVISITH-SHSPLAQLSTVSLASNVAEETDVFSPM 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + D+L + + + +R+ ++ + + Sbjct: 243 TSRMSHLAIGDILAVGVALRRGPELVDRLGRAKEAITR 280 >UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4M2_9CLOT Length = 282 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 67/274 (24%), Positives = 135/274 (49%), Gaps = 3/274 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR +Y L+ S K +ADY+L PD + ++A VS+++V++F KL Y + Sbjct: 9 IRTKYNTLSSSQKDVADYILTNPDKVMMNTLNEIAAACRVSETTVLRFLHKLNYNSYQLF 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 ++ L++ L+ + +++ + D + +K+I +++ + + + V Sbjct: 69 RINLTQELSKDNQET---VYDDVGFQDTEDEIIDKIIHSTVSSITDSRQIIDPASVKAVV 125 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + ARRI++ G+GASG +AQ+ KL+K+G NA D H + + +L+ Sbjct: 126 EKIAGARRIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQNTILILF 185 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G RE+ A +V A+T + + L +A + L + + E S ++++ Sbjct: 186 SHSGESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLCSSSRETMFRSDAMTSRI 245 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 Q ++ D+L+++L+ + +I S V K Sbjct: 246 VQMVIIDILYVSLVIALGDGILPQIHSSRLAVAK 279 >UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EB66_BRASB Length = 270 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 4/271 (1%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L +++A+ + QP+ H S ++A VS+ ++V F +++G +GF LK+ Sbjct: 1 MLPELPPKARQIAELIAAQPEPFVHKSITEVAEACDVSEGTIVSFCRRVGVRGFQELKIM 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L+ L P I + D V + + + A++ T + S E L E +L Sbjct: 61 LARDLIE----PVRLIQEDLHRGDDPATVTDHIFAAHAASLQETRRLLSMEALAEATRLL 116 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 R A+RI + GIG+S +AQ+ +++L+++G A A+ D H + + P + +S++ Sbjct: 117 REAQRIEIYGIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTGPGVATVTVSHS 176 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E LA G + + IT + L LYT+A E ++S+ AQ Sbjct: 177 GSTVETVLATRLAQAAGARTIGITRLGKSPLAAHCEVLLYTVANETRYRPEAMSSRVAQL 236 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + D L D E + R++H+ ++ + Sbjct: 237 AIIDTLVSCCALTDTERSVGRLQHAARILSE 267 >UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=Bacteria RepID=D1AUV3_STRM9 Length = 272 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 126/268 (47%), Gaps = 11/268 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+ Y ++ + K+ADY++ + D + ++ + VS++++V+F +K+G+ Sbjct: 1 MKYITLIQSFYPSFSKQEIKVADYVIKEKDAICFMPLHEITKKINVSEATIVRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF KL ++ +A+ + + H E + + T N+ ++E Sbjct: 61 KGFIDFKLEVAREIATIEDERNTKEH-----------YIENIEYNIIETIKNTKNLINKE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + +++++ + G+GASG+ A F + M+ G +V D H + ++ Sbjct: 110 DVENAIEAIENSKKLYVFGMGASGVAALEFQNRFMRFGKIGHSVSDGHFQVMYASTTTEK 169 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +L G K++AIT + + + + + + T +E N Sbjct: 170 DVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPIAKLSDIVILTSGKETLLNGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAP 268 ++ + +Q + D+L ++ + A Sbjct: 230 ALVSKMSQLYIIDVLATGYALRNSKKAK 257 >UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_LISW6 Length = 283 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI L S+KK+ +L P+ S +LA +A S ++VV+F + +G + Sbjct: 5 SIINRIEGILHDLPTSEKKIGQTVLANPEFTTTASIHKLAQKADASGAAVVRFCKSIGLQ 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP LK LS LA P + I ++ + +KL+ M T + E K Sbjct: 65 SFPELKRQLSLDLA----QPQKIGYYDIEPNEDFHTITDKLVSNMMQTMNDTASQLDETK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L A I G+GAS LVA++ + K ++ G + A +D H L Sbjct: 121 VLTACDLLGDADTIYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGKRKS 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +AIS +G E+ D+ V+++T F N L+++A L T A E S Sbjct: 181 VFIAISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEIRST 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ ++ D+LF + ++I+ S + Sbjct: 241 ATSSRQAQLLVVDILFYYYASHHYDEMIQQIKQSREATNRF 281 >UniRef50_P26833 Uncharacterized HTH-type transcriptional regulator CPE0189 n=15 Tax=Clostridiales RepID=Y189_CLOPE Length = 279 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 143/278 (51%), Gaps = 2/278 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ +S+K L +Y+ D + S +A E+GV ++++ +F +KLG+ Sbjct: 1 MGILEQLENPKFKATKSEKTLIEYIKSDLDNIIYKSISIIAKESGVGEATITRFTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ L++ ++++ + + +H + D+ + K++K + + T+ + Sbjct: 61 NGFQDFKVTLAKEISNKKNTSIINLH--VHRDESVTETANKMLKSSINILEQTVKQIDLD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +C ++ +A+R+ GIG SG+ A + +K M+IGF V D H ++ ++ D Sbjct: 119 LMCKCRDLIMNAKRVYFIGIGYSGIAATDINYKFMRIGFTTVPVTDSHTMVIMSSITNDD 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +E+ + G K++ +T + N L++ + + L + E + Sbjct: 179 DVIVAISNSGTTKEVIKTVKQAKENGTKIITLTEDSDNPLRKLSDYELTYTSAETIFETG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SIS+ Q L DLL+ +I++ A E+ + + + Sbjct: 239 SISSKIPQIFLLDLLYTEVIKEMFSEAVEKKIKTTSAI 276 >UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus lactis RepID=Q02VU4_LACLS Length = 282 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 133/276 (48%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RIR Y L++SD+ ++DYL+ D+A LS Q+ A + VS +++ +F++K+G+ Sbjct: 5 LISRIRSYYDNLSKSDQAISDYLIANIDSAAMLSIQEFAQKTQVSTATISRFSKKIGFNS 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LKLA+ + + +++ D + + K N +++ +TLN+ S +L Sbjct: 65 FQELKLAI----HATDSTRDDEFFSELSPTDDYKEILTKNFNGNISSLNSTLNLISNRQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +L A G+G S VA K +++ + +D H + +D Sbjct: 121 DQTMEILLKANTCGFFGLGGSNAVALIAFHKFLRMPLHCVYHQDFHFQQMQAAKLTSEDC 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 IS+TG ++ + + G ++A+T F + L + A L +I+EE + ++ Sbjct: 181 AFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAADVALISISEEISFRPEAV 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ +Q L D LF+ + +++ + ++ Sbjct: 241 ASTVSQISLLDALFMMYGMKMKDVSEGTLSEIRKVI 276 >UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales RepID=C6JFM8_9FIRM Length = 285 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 1/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I ++Y L +S KKLADY+ ++LS LA VS++++ +F + LG Sbjct: 4 SILDSITEQYHSLTKSGKKLADYVFSHTTETQYLSITSLAENCKVSEATITRFCRGLGLS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A KLAL++A + S + +D + + K+ N ++ + + EE+ Sbjct: 64 GYNAFKLALAQADRTTDLGDSSNSAEPVSSEDSISTICAKVHAANLLSLNESYALYDEEE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + +++L S+RRI G G S ++A + N + D H + + + D Sbjct: 124 MSKAISILSSSRRIYCFGQGGSMIMAMEAWARFSTASPNFVHICDSHMQASAIAMADSKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L SY+G R++ V+ IT F +A + AS L E S S Sbjct: 184 AILFFSYSGSTRDMCDTLQIASSRHVPVILITHFPKSAGAEFASVVLQCGYNESPLQSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL-APERIRHSEALVKKLV 282 ++A Q L D LF Q + + R + A+ KL+ Sbjct: 244 VAAKVGQLFLIDCLFYGYCSQKPDTCSAARSATAHAIANKLL 285 >UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YX9_LACSS Length = 280 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 70/274 (25%), Positives = 136/274 (49%), Gaps = 5/274 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R Y ++ K++ADY+ + + L+ Q+ A GVS +++ +FA+ LG+ F A Sbjct: 9 LRSYYDNFSEKYKQIADYIFQESQFNQRLTIQEFAANCGVSTATISRFAKILGFDNFQAF 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+AL E+ + P+ ++I +D + EK+ N+ A+ AT ++ +EE+L + V Sbjct: 69 KMALLA-----KEANTSPLFHEINANDTFTTMAEKIFSSNSNALKATWSLLTEEQLQKAV 123 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ A + L G+GASG+VAQ+ K ++ +D H L + D + I Sbjct: 124 ALINRAHLLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDYHLQLMQATKLTNQDCAIII 183 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G ++ A + ++ IT F ++L + L +I+EE + ++ A Sbjct: 184 SHSGQNKDALELARILKERQVPLIVITSFGNSSLAKLGDITLLSISEETNYRAEALHALI 243 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ L D LF+ + + + + + A + + Sbjct: 244 AQISLIDSLFMMVAVNNGQETEQSFKEIRAEIDR 277 >UniRef50_Q184N2 Putative phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q184N2_CLOD6 Length = 283 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 150/281 (53%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L+++Q Y+ L + DKK+ADY+L + LS +LA+ + S +S+V+F++K+GY Sbjct: 1 MSCILKLKQIYEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ L + + N D + V K+ +N + T +N ++ Sbjct: 61 SGFGDLKIEIAKDLMGKENEYTYVDEN---YDCNIDSVINKITNKNIETINQTRLLNEKD 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E V + A+ + + G+G S LVA + KL++I A D H L + Sbjct: 118 IIKEAVEQIIKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKE 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G +E+ + + G KV+ IT ++ N L + + L E+ Sbjct: 178 DIAIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRLREG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A L D+++I++IQ++L A ++++ ++ ++ L Sbjct: 238 AISSRIAMLTLIDIIYISIIQENLNEAEQKLQETKRILDYL 278 >UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPL3_9FUSO Length = 285 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ Y L++ +K +ADY+L + + +L+ LA GV S++ F +KLG+K Sbjct: 5 NMKFTIKTIYNDLSKKEKLIADYILKNINKSTNLTIADLAENIGVVNSTIFSFTKKLGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + ++L + ++ +H +I +D + + EK+ N ++ T + ++ Sbjct: 65 GFREFR----DSLLRDQFNSNINVHEKISKNDSITSIIEKVFNSNIKSLEDTKKIAEKKS 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + G+G S ++A + K ++ D H L + +D Sbjct: 121 FSTALKILTQVDIVHFFGVGGSSVIAHDAYHKFLRSPLKCRFDSDFHLQLMQASLLTKND 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS++G+ +E AD K++ +T + + L ++A + AEE S + Sbjct: 181 CAFIISHSGMTKESIEIADIAKERKAKIIVLTSYPLSILAKKADITFISTAEEIEYRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D +FI ++ + + + K Sbjct: 241 LSSRIAQLSILDTIFILVMLNNPTKTQISLNKIRTTIAK 279 >UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM70_9ACTN Length = 283 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R+R L+ +++LA++LL P A ++ Q+A G++ S+V KF QKLG++G Sbjct: 6 IRVRVRALESSLSDKERQLAEFLLADPHKASKMTISQIAQTLGMADSTVFKFTQKLGFEG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + LA++ P V IH I + + E + + + ++ T + SE+ + Sbjct: 66 FRDFR----GELAAEGFDPEVSIHEHITHKSTPKQMAETVFESSIRSLTDTKELFSEQDI 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++ G+G S +VA + K ++ A D H L S+ DD Sbjct: 122 IHAAKLIEDCYQLTFYGMGGSSVVAADAYHKFLRTPKRVAYDADFHLQLMRASRSNGDDC 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L +S++G + A+++ VG + IT + L A CL TIAEE A S S+ Sbjct: 182 ALLVSHSGRCIQTIQIAEKLREVGASTIVITSNPSSPLTALADACLVTIAEETAYRSESL 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ +Q L D L+ ++ D A ++ ++ Sbjct: 242 ASRISQLALVDALYTIVMFSDENAASRSLKEVREVI 277 >UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEV7_ACHLI Length = 281 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 135/281 (48%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L + + + L+ +++ + DYL+ + S +++A A S +SVV+ +KLGY Sbjct: 1 MSVMLNMLKNKEALSMAERIVLDYLIENKTLLKDFSVEKIAEAAYTSPASVVRMCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ A + + + I D + G+K I+ N A+ T+N+ E+ Sbjct: 61 NGFKDFKIDFILANSKVEIPETSEYTDVILIKD--QNNGKKAIENNIRALEETINLYDEK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +++ +AR+I++ G G+S LV ++ KL +I A + H + Sbjct: 119 TYTKAASLIMNARKILIFGKGSSFLVCKDLEMKLRRINKFCVAQGESHDQFVDASFINNK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ +A +++IT + L + LYT A E SA Sbjct: 179 DVVIFISNSGKTKEIISSALLAKENKTPIISITRIGSSILADISDVVLYTSALESEFRSA 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ +Q + D L+ D++ + + + + +KK Sbjct: 239 AMTSRISQMSVVDALYAKCAYTDIDRSIQALETTYRTIKKF 279 >UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUN7_9ACTO Length = 294 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 1/259 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RIR L +++++A+ +L P + QLA + S ++V +F + LG G+ Sbjct: 6 TRIRGLVPTLTPAEQRVAEQVLADPLGTHRGTIGQLAERSRTSLTTVTRFCRALGMAGYQ 65 Query: 65 ALKLALS-EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 L+ AL+ EA + ++ I DDP++ V L+ + A+ T + Sbjct: 66 ELRFALATEAGEASSRDWTLGAAADIGPDDPMQSVLANLVATDVRALQETASQLDLAVAE 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + V + +ARR+ L + S V + +L ++G D+H LA+ P+D+ Sbjct: 126 QLVDAITTARRVDLYAVSGSAAVTNDLQRRLHQLGITCHLWIDVHDALASATLLGPEDVA 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS++G E+ G A+T F +A+ A L T A E S S+S Sbjct: 186 IGISHSGETIEVIEPLTAARDAGAVTAAVTNFPRSAITSVAGLLLTTSAREATYRSGSLS 245 Query: 244 ACHAQGMLTDLLFIALIQQ 262 H Q ++ D L + Q+ Sbjct: 246 GRHTQLLVIDCLVTGVAQR 264 >UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus suis RepID=A4VXR0_STRSY Length = 275 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 6/273 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + + L ++ KL DY+ ++ QLA+ AGVS +++ + ++K+GY F L Sbjct: 6 LNHSIENLTPTENKLLDYIEENIHRIETMNIYQLADNAGVSTATISRISKKMGYSNFNKL 65 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ ++++ ++ D + + KLI T + T++ + E+L V Sbjct: 66 KIEIAKS------KYDDLLNAHFTPSDSIDDISTKLIHSITISNQQTVSFLNLEELEAAV 119 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L+SA RI L G+GASG+V +F +KL +IG +D H +A + + DL + I Sbjct: 120 KLLQSASRIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAGNGDLAIGI 179 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 SY+G+ +E+ G + ITG N L A E +I++ Sbjct: 180 SYSGMTKEVVEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELRVGAITSRS 239 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 LTDLL++ALIQ + + ++ L + Sbjct: 240 NSLFLTDLLYLALIQDHKQEITAILEQTKHLTE 272 >UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C2H3_LISGR Length = 282 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 6/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI ++ L +S+KK+A+ +L P A S LA A S +++V+F + LG K Sbjct: 5 SILNRIETLFKDLPKSEKKVAEMVLQDPAFASASSIHSLAKRADTSAAAIVRFCKSLGLK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP K L L+ SP + D+ + +KL+ + T SE K Sbjct: 65 SFPDFKRQLYSELS----SPVASGYYDFEEDESFDGISQKLLANYFQTLNDTAGQISEAK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + L A I G+GAS LVAQ+ A K ++ G +D H L A Sbjct: 121 IRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGKQVVISQDEHVLAMAFAARKSG- 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + A+S +G + A++ + V+ +T F P+ L+ +A L T A E S Sbjct: 180 VFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSKLKAKADFLLETSRAPEAKFRST 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ + D+L+ + + + E+IR S + Sbjct: 240 ATSSKQAQFFIIDVLYYHYVSRHYDQMIEQIRESRQATDRF 280 >UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulator TM_0326 n=7 Tax=Thermotogaceae RepID=Y326_THEMA Length = 280 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 143/282 (50%), Gaps = 5/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLG 59 M+ + RI+++Y ++KK+AD +L P S L+ +AGV S++SVVKF +KLG Sbjct: 1 MDVIQRIKEKYDEFTNAEKKIADTILSDPKGIIESSISDLSEKAGVKSEASVVKFYKKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ L+++++ +P ++ + +D + + EK+ K A+ TLN Sbjct: 61 LNSFQQFKVLLAQSISR---APLEIVYEDVSSEDDTKTITEKIFKATVRAILDTLNWLDI 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + V + ++A+RII G AS VA + K +IG N D H + A + +SP Sbjct: 118 DSIERTVDLFKNAQRIIFIGFAASAAVAFDAFHKFTRIGKNCLFSNDEHIIAAILATASP 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DLL+AIS+TG + A + + V+ ITG + L + + L T +E + Sbjct: 178 SDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETKIRT 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ Q ++ D ++ L +D A E + S V +L Sbjct: 238 DAMTSRIVQLVILDTIYTLLAARDP-RAIENLNKSRLAVSEL 278 >UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9G3_9ACTN Length = 285 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 131/280 (46%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I+ A+ ++ +A ++L +++ +LA++ GV+ S++ KFAQK+GYK Sbjct: 5 SVTAKIKSLLPSCAEKEQAIAQFILQHVRETSYMTIHELADKLGVADSTIFKFAQKMGYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + L ++ P V +H I D L + + + +++ TL + +E+ Sbjct: 65 GFRDFR----NDLLTEAYDPEVSVHEHITTRDSLATIAATIFHSSVTSLHNTLALLNEDN 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++++ +A + G G S +VA + K ++ + D H + D Sbjct: 121 LKRALSLINNAHTLTFFGCGGSNIVAADAYHKFLRSPLHCQNAIDEHIQIMQASLLGAQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G+ R A+ + ++ IT + + + A + +EE S S Sbjct: 181 VAIIISHSGLSRTTLQIAEILRENRVPIIFITSYLNTPITRFADVVFISASEETGYRSES 240 Query: 242 ISACHAQGMLTDLLFIAL-IQQDLELAPERIRHSEALVKK 280 +++ AQ ++ D LF A+ + D + + + + + + + Sbjct: 241 LASRVAQLVILDTLFCAVMFKSDDKNVAQTLHNIRSAINR 280 >UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=cellular organisms RepID=A9BXM8_DELAS Length = 323 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 9/264 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI LA +++++A +L P ++LA A VS+ +VV+F + +GY G Sbjct: 43 MLDRITASLPSLAPAEQRVARLVLADPRAFARQPVRELAERAHVSKPTVVRFCRSMGYDG 102 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE-- 120 KL L+ +++ IH + DD V K++ AA N S Sbjct: 103 LADFKLKLAGSVSEGVPF----IHRSVDTDDKTSDVMVKVVDNAVAAFLQYRNAASTTAI 158 Query: 121 --KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + ++ RRI G G SG+VAQ+ K ++G + A D H + + Sbjct: 159 EQAAQAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLG 218 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D + IS +G R+L AAD + G +AIT + L L E Sbjct: 219 PGDCAVIISNSGRTRDLMDAADIARKNGATTIAITASG-SPLASACHIHLAADHPEGYDR 277 Query: 239 SASISACHAQGMLTDLLFIALIQQ 262 + + + ++ D+L + + Sbjct: 278 YSPMVSRLLHLLVIDVLATCVALR 301 >UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRD4_9DEIN Length = 264 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 6/265 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + + +++A Y+L D + + ++A+ AG S++SVV+F + LG++GF KLAL+ Sbjct: 1 MTPALERIAQYVLHNADQVIYQTVIEVADAAGSSEASVVRFCRDLGFQGFQDFKLALASD 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L + P I + + + + + T + + + L E V + AR Sbjct: 61 LVTSP-----VILPKQEKPTSAQSTADYVYNTARQVLDETRRLMNVDLLEEVVERILKAR 115 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 RI G+G +G AQ+FA KL ++G A A D H+ + P DL IS +G Sbjct: 116 RIDFYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSGSSI 175 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + A ++ G +A+T + + + A L T A E S+ A +Q ML D Sbjct: 176 DTVKALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPESPLTRGSMGAKISQLMLLD 235 Query: 254 LLFIALIQQDLELAPERIRHSEALV 278 LF + + A E + + A V Sbjct: 236 FLFTRTALRHPKGA-ELLSKTAAAV 259 >UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=A0JVW9_ARTS2 Length = 309 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 124/283 (43%), Gaps = 8/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RI R L S +++A+ +L P+ A+ ++ +LA AGV +S+V +F ++LG Sbjct: 9 GLLHRISGRLPYLPPSLRQVAEAVLKSPEQAQTMTISELAVAAGVGESTVSRFVKELGID 68 Query: 62 GFPALKLALSEAL------ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 G+ ++ L L+EA S + S ++ + D + K+ + + ++ T Sbjct: 69 GYKSMLLGLAEATFISKAATSARTADSEVVYEGVNRGDTAAEIAGKVERSSVQSLRRTGQ 128 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 E + V ++ ++ +I + +G+S + A+ + + G RD + Sbjct: 129 RQDVEAIQRAVDLIDASNTVIFSCMGSSSIAAEEAVMRFTRAGKKCMLYRDTTIQVMLAA 188 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--E 233 P DLL+ IS +G + A + G +AITG + L+ A LYT Sbjct: 189 IIEPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLRNYADVVLYTATVPS 248 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S+++ Q ++ D+L+ + + E ++ + Sbjct: 249 GGELYGESVTSKWGQLLVIDILYATYASRHYDATVEHLKQTYQ 291 >UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JIB3_RHOER Length = 291 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 80/279 (28%), Positives = 136/279 (48%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RIR L+ ++ ++A+ + P A L+ LA A S ++VV+ A++LG++ Sbjct: 12 DLLARIRASLSSLSPAELRIAEIIEADPSLASTLTVNDLAERASTSTATVVRTAKRLGFE 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+LAL+ A++ ++P+ I D V KL + + + T + Sbjct: 72 GYPQLRLALA-AISGSGTENTIPLGVDIVAADSAGEVMAKLAEFESEQLKGTAQLTDPAA 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V+ +RSARR+ + GIGASG+VAQ+ KL +I N D A + + PDD Sbjct: 131 LEEVVSRIRSARRVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLDRDAAMVSASLLGPDD 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ R G AITG + L ++ H L T E SA+ Sbjct: 191 IAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHHVLLTAGREFGFRSAA 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ Q ++ D +F + R +A+ K Sbjct: 251 MASRTGQLLVVDTIFAMVAHSLPSALSALQRSHDAIASK 289 >UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=Streptomyces RepID=B5HLI6_9ACTO Length = 317 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 1/275 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++R + +S ++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 37 AKVRTLGPSMTRSMHRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 96 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+LAL+ A Q + I I DDP+ V KL + + T +L Sbjct: 97 DLRLALAGLAAQQQSGRAPAITTDIAVDDPIADVVAKLAYDEQQTLADTAAGLDTAQLGA 156 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V SARRI + G+GASGLVAQ+ KL++IG A A D H + D+ + Sbjct: 157 AVAATASARRIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRSGDVAI 216 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASIS 243 AI+++G ++ G +AITG A+ Q A H L T A E A++S Sbjct: 217 AITHSGATGDVIEPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESELRPAAMS 276 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + +Q ++ D LF+ + Q+ E A + S + Sbjct: 277 SRTSQLLVVDCLFVGVAQRTYETAAPALAASYEAL 311 >UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU66_9CLOT Length = 285 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+ IR Y L + +KK+ADY+L P ++ +L+N GV ++V +F + + Sbjct: 5 NLLISIRSCYDRLTRLEKKVADYVLQHPQEVVKMTINELSNSCGVGDTTVFRFCRSMNVG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL+ + S N + D L + +++ T A+ TL+ + Sbjct: 65 GYQDFKLALALSSNVNDMLDSKGEFNLAQSHD-LHELAQQVSGVFTDAVNETLSSLDYDA 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + +AR + L G G SG+ A ++M+I N D+H L + D Sbjct: 124 ISRTVEAILNARSVHLFGFGNSGVSALMMQNRMMRILPNIFYTSDVHMQLTSAATMQEDS 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +G+ ++ A G + IT F A L + A E S Sbjct: 184 VAIIFCNSGITKDSIRIAQMTHEAGAFTVFITKFMQTPAAPYADVLLCSGATEGPIQGGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKK 280 IS +Q + LL+ L ++ A E +I+ + A+ +K Sbjct: 244 ISGVASQMYIVMLLYSELFRRMETRAQENKIKAAHAIAEK 283 >UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QW74_CLOBU Length = 281 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 144/281 (51%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y + +S+KK+ADY+L+ S+ +LAN S SSVV+F++KLG+ Sbjct: 1 MNCSLLIKQIYDKMTESEKKIADYVLVNSSEVYKFSASELANITKTSSSSVVRFSRKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L++ + E+ I +D +R V K +N ++ T+++ E Sbjct: 61 EGFQEFKIELAKDDINPVENIEYDY---IDTEDNIREVIVKTANKNIQSINDTISLLDEH 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E + +++A+ I + GIG S L+ + +KL++I NA + H L+ S D Sbjct: 118 TIEEAIKAIKNAKNIYIFGIGESALIGLDLQYKLLRIHKNAMISLESHVQLSMSANISND 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + ISY G +E+ A + G K + IT F N + + E+ Sbjct: 178 DIAIGISYLGKTKEVYSALSKCKEKGAKCITITKFGENPVSSLGDIKIQVPFVEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ Q + D+LF+ L +++ + ++ + ++++L Sbjct: 238 AISSRIVQLTVIDILFVGLAKENFSDVEKYLKETRNMIEEL 278 >UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor) n=2 Tax=Bacillus RepID=Q9K6Z8_BACHD Length = 284 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 133/260 (51%), Gaps = 2/260 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I Q ++ K+A+Y+L P+ ++++QLA +A SQSS+V+F ++LG + Sbjct: 6 LLAKIEQELASFPAAETKVANYVLKHPELVPTMTTKQLAEQANASQSSIVRFCKRLGLES 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP LKLAL++ L + + + + DD ++ +K+ N A+ +E+ Sbjct: 66 FPKLKLALAKELTRKEAYINSA--SLLETDDSPPILFQKVSSLNQMALDMATKAMNEQAF 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V + A++I G+G S + +K M++GF++ A D H ++ + D+ Sbjct: 124 TEAVEQMVKAKKIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGDYHQMIPFITMMDEQDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ +S +G +E+ AD K++ IT + +AL ++A+ L E SI Sbjct: 184 VICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDIEVQQRIGSI 243 Query: 243 SACHAQGMLTDLLFIALIQQ 262 ++ +Q + D L++++ + Sbjct: 244 ASRTSQLNVIDALYVSVFHR 263 >UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KLH9_PECWW Length = 320 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 139/277 (50%), Gaps = 2/277 (0%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I GL+ +++ +A+Y+L P L ++LA E GVS++++V+F + +GY G L Sbjct: 40 IANILHGLSDTNQTIANYVLQNPSMVAQLPVKKLAVEIGVSEATIVRFCKHIGYAGLLEL 99 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K AL+ L S+P+ I +D V +K+ A+ T+++ + +++ V Sbjct: 100 KSALNREL-FDDSDLSLPVTPDILMNDTRHDVAQKIALTVDRAVKETIDLIDMQTINQIV 158 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ SARR++ G GASGL A K+ +IG ++ A D ++ + PDDL++A Sbjct: 159 SLFISARRVMFIGFGASGLAALEARDKMNRIGIDSDAFTDRFSMTLKLANLKPDDLVVAF 218 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G E+ A + G LAIT T + L ++ L T E + SI Sbjct: 219 SHSGETPEVVNAFKLAEKAGATRLAITHSTHSPLTSLGNYVLLTCGESERYQGDSIGTRV 278 Query: 247 AQGMLTDLLFIALIQQDL-ELAPERIRHSEALVKKLV 282 +Q + + L L +Q+ + + + I L+K+ + Sbjct: 279 SQLFMIEFLCTELTKQNFKDFSSQSISIKALLIKERI 315 >UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R285_BRAHW Length = 285 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 141/281 (50%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L IR +Y+ +++ KK+++Y+L P L++ ++ GVS +SVV+FA+ LG+ Sbjct: 1 MNAYLIIRDKYEDFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG LK++++ + + I+ I DD + + K++ ++ +E Sbjct: 61 KGLDELKISIAS--KNGDDDNKYNINTIISADDNVEELCNKIMLLIKSSNEDFFYQLDKE 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++R+AR I + GIGAS L A + KL + FNA D H + + Sbjct: 119 ALEKAFKLIRNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYLTEE 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++A SY+G E+ ++A+T N L + A + E+ T Sbjct: 179 DVVIAFSYSGRTNEVIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELTRMG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ +++DLL+ IQ+D E E + ++ L ++L Sbjct: 239 AITSKYSSLIVSDLLYFGAIQKDFENIKENLINTSILTREL 279 >UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG85_KOSOT Length = 275 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 140/277 (50%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++++ Y L++S++++A Y++ +PD H + +LA + S+++V + +KLG+ G Sbjct: 2 IIVQLKGIYDSLSESERRVAKYIIERPDDVIHYTITELAKFSHSSEATVYRLVKKLGFSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + K++L+ L+ E + + E++++EN + T+ V + L Sbjct: 62 YQSFKISLARELSIPQEVIEE------GSEGSYQNFVERIVQENISLAKETMAVLDLDAL 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ +ARR++ G+G S +VAQ+ ++ +GF++ D HA + + +D+ Sbjct: 116 KKAVELIINARRLVFFGVGRSAVVAQSGSFNFALLGFSSTHYIDPHAQVMVASGLTNEDV 175 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS+TG R+ + G K + IT + + + LYT A + + S Sbjct: 176 VVGISHTGTIRDTVKSVQVAHAAGAKTIVITSGINSPITEVGDVVLYTAA-GKPSTSEFT 234 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + ++ D+L+ ++ + E + E ++K Sbjct: 235 VSRIGEFLILDILYKTVVARMSERLSKHFDKLEEILK 271 >UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Tax=Gammaproteobacteria RepID=HEXR_ECOLI Length = 289 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 126/280 (45%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + + L++S++K+A+ +L PD A H S +A EA VS+ +V +F + + Sbjct: 1 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP KL L+++LA+ ++ + DD + K+ + A + + + Sbjct: 61 RGFPDFKLHLAQSLANGTPY----VNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A++I G+G+S VA + K + D+ + S Sbjct: 117 AINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDG 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS+TG + L A V+A+T L + A+ + E Sbjct: 177 DVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGT-PLAREATLAITLDVPEDTDIYM 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + AQ + D+L + + ++ + +K+ Sbjct: 236 PMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKE 275 >UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI5_9CLOT Length = 294 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 128/279 (45%), Gaps = 2/279 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +L IR + Q + K +A+Y+L + + LA E+ VS+++V +F + +GY+ Sbjct: 14 IVLDIRSKMQDFNPAQKAVANYILNNFYDMEGMPIRDLAVESEVSEATVSRFVKAMGYEN 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A +L ++++ A + S+ + ++ +D + K+ + N A+ TL V + L Sbjct: 74 YRAFQLEVTKSKAER-RKGSLKGYAEVTEEDNAPGICRKIFESNIQALQDTLTVIDYDAL 132 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ARR+ + G S + A + +L ++G D H P+D+ Sbjct: 133 ERAADLIARARRLCIFAQGRSKVTANSIRLRLHRLGIEGTLYTDPHEQAIASSLMGPEDV 192 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSAS 241 + IS G R + ++ G ++ +T + L++ A L T+ +E S Sbjct: 193 AVGISTFGRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEADILLRTVNNDEADFGSEP 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A Q ++ D L++ + ++ A ER + + +++ Sbjct: 253 SCASVTQMVMLDCLYMLVAKRMEGKAEERFKITRDAIQQ 291 >UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU Length = 312 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 127/280 (45%), Gaps = 3/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + S+K +A Y+L ++S+ QLA S +++ + QKL Y Sbjct: 1 MSLLRKLEMAVD-FSTSEKLIATYILKNGPDVLNMSTSQLAKATYTSPATITRLCQKLEY 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ K+ALS L + + + D + + + ++ T+N Sbjct: 60 KGYNDFKIALSAQLQYTFDRNSETNPNFPFKKRDTIHTIKHSIATLAKDSINLTVNNIDN 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + ML A+ I + G+ +A +F +K+ +IG N ++ L S+ Sbjct: 120 DILAKIIIMLDQAKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQSNK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D + ISY+G E+ AA+ + R ++AIT F + L + + L+ + E+ + Sbjct: 180 DHCAILISYSGETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIYSK 239 Query: 240 -ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ + + ++ D+++ L + + E ++ ++ Sbjct: 240 VSTFGSTISIHIMLDIIYSCLFARHYDENLELKLETDHII 279 >UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q040R4_LACGA Length = 283 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ Y + KK+ADYLL P T +Q L S +S+++F Q+LG+ Sbjct: 1 MDLSTKVLNNYPNFKGASKKIADYLLAHPKTFLQEDAQGLGKMTKTSAASMIRFCQQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L++ E PI + D +V +KL+ T ++ Sbjct: 61 KGLKDFQIQLAQDTPQDNEETIDPI---VDHHDNPHIVLQKLLSSIEKNTEQTAHLIDGL 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L++A RI L G+GAS L AQ+ +K ++ N +D+H L + S Sbjct: 118 ALNQAINFLKNADRIYLAGVGASSLPAQDLYYKFIRSDKNVVFNQDIHIALERICYSHST 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L+ SY+G+ +E+ L AD+ + ++ +T + L + A L +E+ Sbjct: 178 DALVIFSYSGLTQEILLMADQARKNHTPIIVVTRSRQSPLVELADVVLGVSTDEKLLRVG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ ++ +LF+A I Q+L ER R +E + +L Sbjct: 238 AINSLFSEMFVSSVLFLATINQELPRLEERFRETELITNQL 278 >UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=22 Tax=Enterococcus faecalis RepID=C2JLW7_ENTFA Length = 290 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 139/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L I+ R Q L +S++K+A+Y+L +T +++Q+LA +AG S +++++F + Sbjct: 12 NIVLSIQDRLQQLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSMDVN 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS L + ++ ++ + + +KL + + + Sbjct: 72 GFTELKLLLSANLGQMKQQ----MYTEVTKGESTADIKQKLQARFVHVVERSGQTLEDVA 127 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++E V +L I + G+GAS LVAQ+ K ++G D H + + ++ Sbjct: 128 VNEAVDLLEKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPS 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSA 240 + + IS +G +E + AD + G +++IT + + +++ L T + E SA Sbjct: 188 VFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQTSSGEDVPLRSA 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + AQ + D+LF A ++ + E+I+ S V++L Sbjct: 248 ATVSLVAQLYVVDVLFFAYAAKNYKETLEKIQISRKNVERL 288 >UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q61_LACBA Length = 286 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR Y L++++KK+A L P ++ ++LA+ GVS +++ +F +++ Y Sbjct: 4 STIGKIRGTYDQLSRTEKKVAQMALNTPAVVSEMTIKELASATGVSTATISRFVKRMDYA 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + +AL+ LA + ++ D L + K +++ AT SE+ Sbjct: 64 NYREFTMALAH-LAIEDGGEHQSSFPELAEGDSLATIANKTFHYTISSLEATNEALSEKD 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ G+G S + A + K ++ + D L S D Sbjct: 123 LARAVLKLINAEKVTFFGLGGSSIAALDGYHKFLRTALSVTYYPDFDIQLMQAARLSDQD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G E +E+ R ++AIT ++ + L Q A ++ +E S Sbjct: 183 CAVVISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAADVTFLSLTDEVNYRSEG 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + +Q + D LF+ + + + ++++ Sbjct: 243 MYSLISQLAILDTLFMMTVLRVSSRTGNVMTKVHDVIEQ 281 >UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7REF2_ANAPD Length = 279 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 153/281 (54%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++I++R + SD K+A Y+L +P ++SQ+LA+ G SQS++++F QK+GY Sbjct: 1 MTYTIKIKERSEDFTPSDTKIAKYILDKPGEVIKINSQKLADLTGTSQSAIIRFVQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ +LKL ++++L + + + I DD + + EK +++ T + E+ Sbjct: 61 KGYTSLKLDIAKSLENDEINLKSEV---ISADDKVGDIIEKSKINVISSIEKTYALIDED 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + + + A + L GIG+SGLV ++F +KL + G A D H L+ + D Sbjct: 118 QISKAIDNIVYANFVYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTNIKED 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ I+YT + +E+ +AA+ +G K+++IT L + + E+ Sbjct: 178 DLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLANMSDILIPIPEIEKKMRYG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A ++TD+LF I ++++ + + S+ L KL Sbjct: 238 AISSRFASQIITDILFYGYISKNMDEVVKNLMVSKELTDKL 278 >UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DKU0_9LACO Length = 284 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 139/281 (49%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI + Y L +S + +AD +L P + +++++ N S +SV++F ++L Y Sbjct: 1 MNVRDRILENYTELKKSSRIIADAVLENPKILLNKNAKEIGNYTNTSAASVIRFCKQLNY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L+++ Q + PI + DD V KL + + Sbjct: 61 KGLKDFQIDLAQSTVKQSQLK--PIDMIVTKDDKADEVMTKLRVSLSQNFEDLSKTIDIK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++++ +R + + GIGAS A++ +KL++ G D+H L + S+P Sbjct: 119 DLQKAVSLIKKSRAVYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYSTPK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ SY+G+ +EL LA + + ++A+T + + L + A L E Sbjct: 179 DVMICFSYSGLTQELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLMRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ AQ ++++L++ I DL + + + L++KL Sbjct: 239 AINSTFAQMFISNVLYLCSISSDLGEVKQEMEATGKLLEKL 279 >UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocaceae RepID=Q03YQ8_LEUMM Length = 284 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 136/279 (48%), Gaps = 2/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + ++R + + +++KL D+++ AR + Q+++ +GVS +++ +F +K+G + Sbjct: 4 NIIAQLRAQRKQYNTTEQKLIDFIINHVSEAREANIQEMSELSGVSTATISRFVKKIGLE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++L+ A+ + SV + +I D V +K+ A+ AT++ + + Sbjct: 64 SFREFSVSLAS--AATQMAASVDLFGEIADTDDTIAVAQKVFGGAENALAATVSNLTATQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E L SARR+ GIG S +VA N K ++ + A D L + +D Sbjct: 122 LDEATLALISARRVGFFGIGGSSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLNSND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G ++ L A ++ K++A+T F + L + A L ++AEE S S Sbjct: 182 TAVVISHSGRNKDTLLIAKKLHEQHVKIIAVTSFKDSPLAKLADLVLLSLAEEVNFRSES 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + + ++++ Sbjct: 242 MSSLIAQLTIIDTLFTLVGSHLSQDTQSVVDTMRDVIEE 280 >UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=Alphaproteobacteria RepID=Q28KP3_JANSC Length = 306 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 86/247 (34%), Positives = 140/247 (56%), Gaps = 1/247 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L+ D+++AD +L PD LSS +LA AG SQSSVVKF QKLG+ Sbjct: 27 SILTIMQAQLPTLSAGDRQIADTILGDPDRMARLSSGELARAAGRSQSSVVKFCQKLGFS 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+LA++ A A+Q ++P+ +H+ I D + +KL+ A+ TL++N + Sbjct: 87 GYQDLRLAVTRAAATQ-KAPNDAVHSSIEVSDDASMTAQKLLASKIHALQETLSINPAKN 145 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L A R+ L+G+GAS LVA++F +KL K+G + D H +A +PDD Sbjct: 146 LDAARDALNGAARVQLSGVGASSLVARDFVYKLQKLGISVLFDADSHIQMAHSATLTPDD 205 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+++S +G E A+ + G ++ +TG PN L A L T+ +E S++ Sbjct: 206 VLVSLSQSGFSLETLRIAEAAAKRGATIITVTGLHPNPLADVADKALCTVTDEDQVRSSA 265 Query: 242 ISACHAQ 248 I++ AQ Sbjct: 266 ITSRDAQ 272 >UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C5BVH6_BEUC1 Length = 299 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 1/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ L S++++A+ +L P + +QLA G S++SV +F + +G G Sbjct: 16 VLTRLPGLLPTLRSSERRIAEAILDDPQAVSRDTIEQLAARCGTSKTSVTRFCRTIGLAG 75 Query: 63 FPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+LAL+ + + ES + + +P +V ++L+ N A+ T+ Sbjct: 76 YTELRLALAGDVGRRRDESWRAELGSSADPQNPADVVVDELLTANVRALTETVRTLDRAA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L SA RI L GIG SG VA + + +IG A A + H L D Sbjct: 136 LAASVDALASAGRIDLYGIGGSGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGASD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A+S+TG E+ A G +A+T + +A+ A L T A E+ + Sbjct: 196 VAIALSHTGETSEVAAALALARDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARADG 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ HAQ + D L++ + + + +R + V+ Sbjct: 256 LAGRHAQMFVVDCLYVLVAGVLHDESQSGLRRTSEAVR 293 >UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=A6UCC0_SINMW Length = 296 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 5/261 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L IR R L +SD+K+A+ +L P + + + A AGVSQ +V++F +G + Sbjct: 16 NILEVIRLRRADLRKSDRKVAELVLADPKRVINATIAEAAEWAGVSQPTVIRFCASIGCQ 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KL L+++LA + H+ I D V K+ ++ N + Sbjct: 76 GYQDFKLRLAQSLALGMSAT----HSVIDASDTPAQVSAKIFDYTITSLDWVRNHLDPVQ 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L A RI G GASG+VA++ K G A D H + V P D Sbjct: 132 VSRAIDALSKASRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLKPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS TG + A G +V+ I G + L + L E Sbjct: 192 VAVVISNTGATLAIIETARRARESGCQVIGIVG-SDGPLVEFCDIVLMVETLENTNIYTP 250 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 + A + D+L ++ + Sbjct: 251 TISRIAALTVIDILSTSVALR 271 >UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG49_SEBTE Length = 283 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 125/276 (45%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++++R+ + ++ A Y++ D LS +LA + S +++++ +K+G Sbjct: 1 MSLIIKLREA-KNFTPNEIGAAKYIISHSDEVIRLSCTELAKKTYTSPATIIRLCKKIGI 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ L+ + S + +N+I D + + +K+ + ++ T + + Sbjct: 60 GGYQEFKVILATEINFFIKNSMEINKNNEIDKKDSISDIIDKISSLSIDSLKETKILTDK 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + M+ +A + L G GAS VA + +K M+IG A + S+ Sbjct: 120 NVVKSVIDMINNAEILDLYGSGASHFVALDANYKFMRIGKVTATYALYDQQYVQAKNSNE 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + SY+G E+ A + K++ IT + N L++ A LY A+E S Sbjct: 180 NHAAIIFSYSGETAEMIEIAKILTENKAKIITITKNSDNTLEKFADKSLYVTAKENLYRS 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 A+I + + + D+L+ A E A E + + Sbjct: 240 AAIYSRISMLNVIDILYTAYFNLIYEKALEALGKTR 275 >UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Gammaproteobacteria RepID=B8KWX3_9GAMM Length = 337 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Q GL +S+ K+A +L PD A +S LA+ AGVS+ SV +F ++ G Sbjct: 52 NLLEDINQSLPGLNKSEVKVAQAILSDPDAATRMSIASLASRAGVSEPSVNRFCKRFGAS 111 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP KL L+ ++ S I + D + KL +A+ A Sbjct: 112 GFPDFKLRLATSMVSGVRY----ISRAVEFSDDIDTYPGKLFDNAISALVAAKEQLPTGD 167 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L ARRI G+G S V ++ K + +D A S D Sbjct: 168 IARAVDFLAQARRIHFFGLGTSAAVTKDAEHKFFRFNVPVTNHQDPLMQRMLAAAGSVGD 227 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG R L A+ + V+++T + L Q + + E Sbjct: 228 VFFIISHTGRTRALVEVAELARQTEATVVSLTA-PQSPLAQESDCAITLTIGENTEEYLP 286 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ Q + D+L + + E + + +K Sbjct: 287 MTSRLVQLAVIDVLATGVTLRRGERFLPHLARIKDSLK 324 >UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6X6_RUMHA Length = 297 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 6/280 (2%) Query: 1 MNGLLRIRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M R+ + G ++++K+A YLL D + H + +LA+E GVS +S+V+F + + Sbjct: 17 MGCRERLIDKRDGEHTKKTERKIAAYLLGNFDKSLHSTLLELADEIGVSDASIVRFCKSI 76 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY GF K+ A Q + + DD + +K+ ++A+ T Sbjct: 77 GYTGFQEYKI----NAALQSVPEPRLYNPSLSVDDNPAEICDKIFAIESSALEQTKQELD 132 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +++ +L ARRI L G G S + A++F KL+KIG A D L + + Sbjct: 133 ISVMNKVADVLLKARRINLVGTGGSAISARDFQHKLLKIGVRAELQEDKDLQLMSASLLT 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D+L AIS++G + + + K++ +T + N L ++A + LY ++E+ Sbjct: 193 EEDVLFAISHSGSNLHVAETIELAQKRNAKIITLTMKSKNILVEKADYPLYVVSEKTIFE 252 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S S SA AQ + D L + ++ + + E ++ + Sbjct: 253 SESFSARLAQLAMLDCLVALMAFKNFDGSLEAMKATRIAT 292 >UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBX8_9LACT Length = 285 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL IR++ L QS+KK+A+ +L P +S+ LA EAG S ++V++F + +G K Sbjct: 4 NVLLTIREKKITLPQSEKKIAETILRDPVKVIQMSATDLATEAGSSSAAVIRFCRSIGIK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS + ++ I D+ L V +K++ T NV ++ Sbjct: 64 GFTELKLQLSAD----SQGIKDNLYTDILADENLEQVKKKMLINTNHLFKETNNVLDTKQ 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + I L G+GAS +VA + K ++G D H L+ ++ + + Sbjct: 120 IERVSELLHESSIIYLYGLGASHIVASDIQQKFSRMGKIVVCSLDQHLLVTSMAVAGENA 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +S +G ++E+ +G K +A+T T NAL A L T A E S Sbjct: 180 VFFGVSNSGEKKEVLALMIMAKELGLKTVALTNNTENALSLEADIALKTAFAHEAPLRSG 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q D+LF ++ +L + S+A +++ Sbjct: 240 ATISLLTQMYAVDILFYDYASKNYDLTVTNLEKSKAAIQR 279 >UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteobacteria RepID=Q7MD38_VIBVY Length = 278 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 119/280 (42%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+R+R + ++ + +ADY+L + + LA S+++VV+ + +GYK Sbjct: 6 NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ L+ I + + + ++ T + + Sbjct: 66 GYSDFRMALAVDLSQTESRQQNHIEGD---------ICDVSAQSAVDSLQDTAKLIDRKS 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A I G+GAS +V + A++L++IG A D H + SS D Sbjct: 117 LARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQGD 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L A+S +G +E+ AA + V+++T + L ++ L E + Sbjct: 177 LWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGPLTGGA 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ +L D+L +L++ E +E ++ + Sbjct: 237 FASKVGALLLVDVLVNSLLESYPEYKDSVQETAEVVIPLM 276 >UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EPZ9_9FIRM Length = 295 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 12/285 (4%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I++ Y L +S++K ADY L +S +A AGVSQ +V++F + LG +GF Sbjct: 9 IKRIYASLRKSEQKAADYYLGYDGPVETMSIAAMARAAGVSQPTVMRFVKALGLEGFKEF 68 Query: 67 KLALSEALASQPESPS-----------VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 K + +A S + +I D V +++ ++ + + L Sbjct: 69 KYQVLKASMGGNGSGMGEEEGGRSEEVLRYGYEISARDRPEEVPGRVVAQSVSYLDDALK 128 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 S + ++ AR+I + + S VA + KLM +GFN D++ + Sbjct: 129 HISPSSIGRAAKLICGARQIAVYYVENSASVAGDLVTKLMYLGFNCIMYNDIYLQHISAG 188 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 D+ + ISY+G + + G +AIT F + + A L T ++ Q Sbjct: 189 NLDSRDVAIGISYSGSSKNTVDVMKLAKKKGAATIAITNFEHSLIAGHADILLCTSSQ-Q 247 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +I + +Q + D++++ +I +D E++ S ++++ Sbjct: 248 LLYGNAIFSRMSQTAVVDMIYMGIILRDYGHFTEKLDESSRIIRR 292 >UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PED1_BACCO Length = 289 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ + L++S+KKL +Y+L + ++ +LA +AGVS ++VV+F + +G Sbjct: 6 NIILQIKSKLTSLSKSEKKLGEYILSHAVETVNDNTSELAKKAGVSPATVVRFCRSIGLS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L A I+ I ++ + ++ +KL ++ T N+ Sbjct: 66 GFSQLKIRL---YADASGGLDREIYTDITPNEDITMIADKLALRFNQSITQTANLLETSC 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + M+ + I + GIGAS + A++F K +IG D H L +++ +S D Sbjct: 123 IEKITAMVDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDHHLLGSSLINASKDC 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSA 240 + +AIS +G E + G + IT + L L E SA Sbjct: 183 MFVAISNSGETNEAIKLTQIAKQNGLFTVGITQKRDSTLASIVDAPLIHHGGEAVLLRSA 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ AQ D+L+ A + + R+++S+ ++ Sbjct: 243 ATTSLAAQLFTIDVLYFAYVAKHYHEIMGRLKNSKINIQ 281 >UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDH7_9FIRM Length = 281 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 5/282 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++Q L +S + +A+YL+ A++LS LA E V++++V +F + LG++ Sbjct: 4 NFWELLQQHQGDLTKSGRTVAEYLVQHAAEAQYLSISSLARECQVAEATVFRFCRALGFE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +++AL++A A + + + D + E A+ T N S + Sbjct: 64 GYHEMRIALAQANA----TGVLVNQQEPAPDADTATLCEHASALFMTAINGTQNALSPQA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L SAR++ G G S A+ + I AV D H + + D Sbjct: 120 VDQAVALLHSARQVFCMGQGGSMAAAKEICARFACITNKFRAVADSHMQVMAASLMTEQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L +SY+G R+L G K++ IT + + + A L A+E +S S Sbjct: 180 VVLFVSYSGATRDLMETLRTAKANGAKIILITHYEDSPGAKLADIVLLCGAQESPLDSGS 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKKLV 282 I A + ++L + I D + E + R +EAL K++ Sbjct: 240 IPIKVAVLYVAEVLVLRYILDDKPGSTEAQERTTEALAVKML 281 >UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=A2RL41_LACLM Length = 283 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 139/282 (49%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ LL IRQ Y +KK+ADY+ + S+Q++A+E G S +++V+F++KLGY Sbjct: 1 MDTLLIIRQNYSNFTTVEKKIADYIFEVGEKMLEKSAQEVASEIGSSSAALVRFSRKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK LS + A + + ++ + + KL + T S++ Sbjct: 61 DGFSQLKQKLSASYAVHEDDE--DYYKEVNDSETPSSIKNKLKVRVNHMVETTNAALSDD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V ++ A I + GIGAS +VAQ+ K +IG ++D H ++++ S Sbjct: 119 EIMAAVALIDEAESIFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSISDRK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNS 239 + + IS G +E+ A + + ++AIT + L Q + + L++++ E + Sbjct: 179 TIFIGISMKGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILHSVSGEDYQMRT 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A+ + AQ + D+LF + + + +++ + +K L Sbjct: 239 AATMSLMAQLYVVDILFYMFVSEHFTESYDKLEKTRDAIKLL 280 >UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGH5_VIBHA Length = 296 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR R L ++++ +A+ L + S +++A GVS + +VK ++KLG+ G Sbjct: 20 VIPNIRMRMPSLTRTEQSIAENFLKPHFMQKSTSIKEVAERLGVSTALIVKVSKKLGFSG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK AL+ S +PS Q++ DD + K+++ + A+ LN + Sbjct: 80 FKQLKDALNAHHHSDSYAPS----EQLQPDDSCEQIVTKVLQNSINALTEILNFVDANMV 135 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +AR I L G S ++ ++F KL++ G A+ RD H +L + S D+ Sbjct: 136 SAAAEAIINARNIELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLSEKDV 195 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + G +++IT L Q + + LY A + + Sbjct: 196 VLVVSHSGQTVDLMDAVRLAKQSGATIISITNNFHAELSQLSDYPLYAPASPEPLLGKNG 255 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + + D L+ + + + A E + + V Sbjct: 256 IARLVKLAMIDSLYATIASKIPDQAEENLEKTTKAV 291 >UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=Streptomyces RepID=B5GNW3_STRCL Length = 354 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 123/260 (47%), Gaps = 1/260 (0%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 ++R + +S +++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 71 KVRTLVPSMTRSMQRVAEAVADDPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYRD 130 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L+LAL+ A Q S + I DDPL V KL ++ + T L Sbjct: 131 LRLALAGLAAHQQSGRSPSVTADISVDDPLPDVVAKLARDEQQTLADTAATLDTAALAAA 190 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V+ +ARRI + G+GAS LV + A KL++IG A A D H + D+ +A Sbjct: 191 VSAAATARRIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGDVAVA 250 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASISA 244 I+++G ++ G +AITG + Q A H L T + E A++S+ Sbjct: 251 ITHSGSTGDVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESELRPAAMSS 310 Query: 245 CHAQGMLTDLLFIALIQQDL 264 Q ++ D LFI + Q+ Sbjct: 311 RTGQLLVVDCLFIGVAQRTY 330 >UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0W9_9CLOT Length = 310 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 129/277 (46%), Gaps = 1/277 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI +Y L++S+KK+AD++ A L+ +++A EAGVS+ S+++F++ +G G Sbjct: 31 LLFRIATKYMALSKSEKKVADFIKNFNGKAEKLTMKKVAKEAGVSEPSIMRFSKSIGLDG 90 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L + + I +D + ++ K++ + + L S + Sbjct: 91 FNELKYCLMKTKKDDEGTMKPLHGFDINREDTIDMIPGKIVMTVENQINSMLESISLKSY 150 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +A+ + + + S A + A KL+ +G N D + + + +D+ Sbjct: 151 SDMINCIINAKNVDIYSVENSVSSANDLATKLLYLGINVKMYTDSYLQKISAYNLTSEDV 210 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + ISY+G ++ + G + IT + + + + A L + +Q +I Sbjct: 211 AIGISYSGNSKDTVEMIKTAKKRGATTVVITNYKDSKIVKYADI-LICTSSDQMLYGDAI 269 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + Q ++ D++++ +I D + E + +E ++ Sbjct: 270 FSRAIQLVINDMIYMGIIHSDYDKYIEILNKNEKAIR 306 >UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales RepID=D1PSB4_9FIRM Length = 282 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 132/282 (46%), Gaps = 5/282 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +R RY L +S +++ADYL + A++LS LA E GV+++++ +F + LG+ Sbjct: 5 NFWELLRSRYSELTRSGRRVADYLTRHAEEAQYLSISSLAAECGVAEATIFRFCRSLGFD 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +K++L++A A P+ +++ + A+ T +V + E Sbjct: 65 GYNEMKISLAQANAI----PTAAGADKLEPGADTATLCTHASAVALEAINGTRSVLNPEA 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + T+L+ AR++ G G S ++A + + + D H P+D Sbjct: 121 IDAAATLLQRARQVFCFGQGGSQILANDIWARFATVSTKFRTAGDSHMQTIAASLMVPED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L ISY+G R++ + G KV+ +T + A L A+E + S Sbjct: 181 VVLFISYSGSTRDMMETLRIVKGNGAKVILLTHYADAPGTALADVVLLCGAKESPLDGGS 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL-APERIRHSEALVKKLV 282 I+A A + ++L + + EL A R R S+AL KL+ Sbjct: 241 IAAKIAVLFVAEVLVLRFTLDNQELAAIARERTSKALAPKLL 282 >UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJX2_STACT Length = 288 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ IR++ + L ++++ +A +LL P+ +S+Q L + S ++V++ A KLG+KG Sbjct: 6 LIIHIREQMKHLTKNEQHIAQFLLEHPEKVLEMSAQTLGDVTKTSSATVIRCAHKLGFKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LKL+LS L + +I D+ R + KL+ + T + ++ L Sbjct: 66 FVDLKLSLSRNLPQHEAHN----YKEIAQDESPREIKRKLLSRAAYTLETTEVLLEDQAL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD- 181 V L ++I++ G+GAS +VA++ K + G D H L + D Sbjct: 122 EALVDKLYDVQKIVVFGVGASHIVAEDIYQKFTRAGMEVIQSADAHVLATVLAGYHKKDN 181 Query: 182 -LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC-LYTIAEEQATNS 239 L + +S +G +E A G V AIT + + L A L+ + E++ Sbjct: 182 VLFIGVSNSGHNQETLRLAHVAHYYGATVAAITSRSDSKLAGEADIVLLHDASSEKSLRL 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ S+ AQ M D+LF + +D + + ++ V+ Sbjct: 242 AATSSLIAQLMTVDILFYTYLSKDYQAHVAHLSETKKAVE 281 >UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 Tax=Vibrio shilonii AK1 RepID=A6D304_9VIBR Length = 289 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 4/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR L ++++ +A+ L + S ++A VS + +VK ++KLG+ G Sbjct: 13 VIPNIRMMMPSLTKTEQSIAENFLQPHFLQKSTSINEVAERLSVSPALIVKVSKKLGFSG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK E+L +Q E+ S ++ DD + K+++ + A+ LN + Sbjct: 73 FKQLK----ESLYAQSETQSYAPSERLLPDDSAEKIVSKVLQNSINALTEILNFVDVSMV 128 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 L AR I L +G S ++ ++F KL++IG ++ +D H +L + + D+ Sbjct: 129 DAAAEALLKARNIELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMTDQDV 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + + G V++IT L + LY A + + Sbjct: 189 VLVVSHSGQTVDLMDAVRQAKQSGATVISITNNYHAELSSLSDIPLYAPASPEPVLGKNG 248 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A + + D L+ + + LA E + + V++L Sbjct: 249 TARLVKLAMIDSLYATMASKMPSLAEESLSKTIRAVERL 287 >UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=Bifidobacterium RepID=B7GUA9_BIFLI Length = 289 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 108/278 (38%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 RI Y L +++ +A Y+ + A L+ Q+A+ A VSQ +V++FA+KLG+ Sbjct: 6 GIRERIDHVYPSLRPAERAVAQYIRDHIEEAADLTVGQMADIAHVSQPTVIRFARKLGFG 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ L A + + + D + K A + + + Sbjct: 66 GYRELRYVLRHPAAEHKVTFNPLDGFDLNPWDGEDEIPSKAADGAKALIDELHSALDPKA 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V +L + I + G+ S A + KL +G D + + Sbjct: 126 YRKAVALLAESEFIDIFGVENSLTPAMDLFTKLGYLGLTCRLNTDAYLQQIGAGHLTHGA 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A S++G + A G K +AIT L A L T + + Sbjct: 186 VAVAFSHSGSSADTVKALRLAKSHGAKTIAITNAIGAPLASWADVTLLTGRDSHTIYGNA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I +C A L D+L++ +I D + S +++ Sbjct: 246 IFSCVADTALVDMLYMGVILSDYGRFSTALDESGRMIR 283 >UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1Y9_BEUC1 Length = 307 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 1/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +R+ L S ++ A+ +L P + + LA +G S S+V + ++LG Sbjct: 16 GILAELRRLLPDLPDSVRRTAERVLADPVASVAGTITDLAEASGTSPSAVSRLCRRLGVD 75 Query: 62 GFPALKLAL-SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PAL++A+ ++A AS + I I D L V L + A++ TL + Sbjct: 76 GYPALRIAVVADATASASSPWEIDISRTIGPTDSLEDVAGTLGAATSRAVHDTLAGLDLD 135 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + ARR+ L G+ S ++ +L +IG + D+H L P Sbjct: 136 VLRDVAHAVAGARRVHLYGVSGSAVMTAELQLRLHRIGIATWSFADVHEGLTGAALLGPG 195 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+SYTG E +A+TG ++L A L T+ EE Sbjct: 196 DVAIAVSYTGETIETLEMLRAAGSRDALTVAVTGAPRSSLAAVADRILVTVTEETTFREG 255 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++A ++ + +LL++A+ Q E E + + V++ Sbjct: 256 PLAARFSELTVVELLYLAVGQLTYERTTELLTQTALAVRR 295 >UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2JBJ8_FRASC Length = 299 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 4/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +R L S +K+ +L P HL+ LA+ G S ++VV+F Q LG KGF Sbjct: 24 IAHLRACLPTLTPSGRKIGQLILDDPREIVHLTVTDLADRTGTSVATVVRFCQDLGLKGF 83 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ L+ P +H + D + EK++ +A+ T Sbjct: 84 ADLKIRLAGE----AIPPERGLHEAVTHADSPATILEKILHSTESALSETTRTVDRAAFT 139 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V L+ A R++L G G S +AQ+ A++ +G A A D H + P Sbjct: 140 RAVDALQCADRVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPADAHVQHVAARLLPPASAC 199 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 LAIS+TG RE A G +A+T F + L + A L + E ++S Sbjct: 200 LAISHTGQTRETLAGAAAARAAGATTIALTSFFRSPLTRLADVALVAGSSETNYRVEAMS 259 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + D LF+A+ + A + + ++ + Sbjct: 260 SRIIHATVLDALFVAVHLAQPDRAQKAQELTAEVLTE 296 >UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945F6 Length = 248 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 128/244 (52%) Query: 38 QQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRL 97 Q+LA A VS++++V+ ++ L KG+ LKL ++ LA S + +I D + Sbjct: 1 QRLAELAEVSEATIVRLSRSLNLKGYQELKLRIAADLAQSLNSNLAESYQEIHMDASSQS 60 Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 + E + N ++ T++V + ++L + +L AR+I L GIGAS ++AQ+F KL +I Sbjct: 61 LVESISHNNMRSIQDTMSVLNIKELDRAIEVLGGARKITLFGIGASAVIAQDFKQKLTRI 120 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 A D + D +L ISY+G +++ LA G ++++T F Sbjct: 121 NRWCEAAYDFDSQATLAANLQEKDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFGH 180 Query: 218 NALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 N + ++A L+T + E++ S ++++ AQ + D+L++ + +Q+ E + ++ Sbjct: 181 NPVAEQAHIRLFTSSLEKSIRSGAMASRIAQLNVIDILYVGIARQNYEENILALENTRKA 240 Query: 278 VKKL 281 VK + Sbjct: 241 VKMM 244 >UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AH41_LEIXX Length = 289 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L+ ++ ++A ++ P L+ +LA SQ+S+ +F Q L Y Sbjct: 3 DVLSAVRQAVPRLSATEARIAQTVIEHPQRVVDLTIAELAAVCDASQASIARFCQALRYS 62 Query: 62 GFPALKLALSEALASQPESPSVP--IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ +LA++ A + + + ++I D L+ V K+ + T A+ T Sbjct: 63 GYREFRLAVAAATSREQATRERFELTESEIDPSDSLQEVVAKIAYQETLAIERTARELDA 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L V + +A R+ L GIG+S L AQ+ KL +IG A D H L++ P Sbjct: 123 EALDAVVAAIIAASRVDLYGIGSSILTAQDLQQKLSRIGLTAFCSVDSHLALSSAALQKP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ +A S++G RE N A G +AIT +++ + L T A E S Sbjct: 183 GNVAIAFSHSGETRETNHALAVARAAGATTVAITNVPESSIAAVSDLLLMTQARENFYRS 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ AQ L D LF+ + Q+ + + +R + V+ Sbjct: 243 GAMASRTAQLALVDFLFVRVAQRLYDQMTDSLRLTYEAVR 282 >UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=Pediococcus RepID=Q03HR4_PEDPA Length = 270 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 136/278 (48%), Gaps = 14/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + Q+Y L++ ++K+A ++ P + ++ L+ +A VS ++V +F +K+GY Sbjct: 1 MNIIDVVEQKYPSLSRQERKIALKVVQHPADVKKMNINTLSKKAEVSTATVTRFVKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+EA ++ I + + +++ + T +++ Sbjct: 61 PDFSQFKLGLAEATSN------------ITENVDNAPLPDQVTDFYNQMITGTWKRINQK 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ ++++A R+ + G+G+SG AQ + +LM++G NA A D H + + D Sbjct: 109 TLNQVAMLIKNAPRVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISSSIMQKD 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ +S +G E+N A + KV++IT F + L + + + L E N+ Sbjct: 169 DLLIVLSVSGKSNEVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQLSVQYSEFVDNTQ 228 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ + D+L L+Q E R + + A + Sbjct: 229 FINSQLGVVYIIDILSTMLLQN--ETYKARYQQTVAAI 264 >UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=Burkholderia RepID=Q13K65_BURXL Length = 287 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 6/276 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + IR L +++K+AD +L D A S +LA A VS+ SV +F + +G Sbjct: 5 NLIPHIRSALANLRPAERKVADMVLSDVDFAMRASITELAQRAEVSEPSVTRFCRAIGAH 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G K+ L++++A S + DD ++ + +K+ + + Sbjct: 65 GLRDFKMQLAQSVAGGVPYASTA----VARDDDVQTLMDKVGEAAIGGITHARGALDPAV 120 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L SARR+ G+G+ SGLVAQ+ A + +++ + A D H P Sbjct: 121 VESAIAALSSARRVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLMEPG 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ AIS++G E+N + G +A+T + L L + Sbjct: 181 DVAFAISHSGRSVEVNESIQIAKERGATTIALTNVG-SRLAWLVDIPLLLRVPSPIDPNT 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + D L I + + E++RH++A Sbjct: 240 PGVSRLVHLCIMDALAIGVALKAGPKTLEKMRHAKA 275 >UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q03CT7_LACC3 Length = 289 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 5/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + L++++KK+ DY++ +S LA AG S +SV + A++L + Sbjct: 1 MSVKGNYQSTRSELSETEKKIVDYVMAHSQAVLTMSVHDLAKAAGTSPASVSRAARRLQF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK+ L+ L +I+ + L + +KL+ + ++ T++ +E Sbjct: 61 SGYNELKMQLAADLKGDTNQSD---DQEIQKNATLTTIKQKLLIDANQSLRETVDQINEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS-P 179 + + ++ + R+++ G+GAS L AQN A K ++G+ D++ L + Sbjct: 118 NVDTIINLIHQSDRLLVFGVGASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATADVE 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATN 238 L IS +G E+ LAA + G +V+ T N+L + A + T E Sbjct: 178 QTLCWFISNSGESPEVVLAAKLAKKAGLQVIVTTKLGKNSLTKYADVSIQTSQPMEARNR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ + H Q ML D+L+ A + + + A S+A V Sbjct: 238 FAATQSLHTQFMLIDILYYAYVSRYYDAAKIATDQSKAAVT 278 >UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enterococcus RepID=C0X1P6_ENTFA Length = 285 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 133/283 (46%), Gaps = 13/283 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + I + Y L +S++K+AD++L ++ + + + +A V +++++F QKLG+ Sbjct: 14 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF 73 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ S+ + +++ K + +T + +EE Sbjct: 74 SGFSDLKIEIAKEDFSKKKEQP-----------SSGKYHDEVAKSLIEVLQSTSCLINEE 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + + ++ A + + G+G+SG + + +++G A AV D H + Sbjct: 123 KLTKAIQLINQASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLTDR 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ S +G ++ + G K+LAIT + + + + A L T EE N Sbjct: 183 DLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEE-FLNGG 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKKLV 282 S++ +Q + DLL Q + + + R + +++ K + Sbjct: 242 SLAGKISQLYICDLLVHEYEQNNKINSLDLREKVLRSIIDKRI 284 >UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF6_9LACT Length = 292 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 136/284 (47%), Gaps = 5/284 (1%) Query: 2 NGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 N L ++ R + ++K +AD+ + + + LA++ G+S++++ KF +K+G+ Sbjct: 4 NYLEKLLRPYIKSFNDTEKIIADHFIKLGHDVVNKTLSNLADDTGLSEATIFKFVKKIGF 63 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GFP K++++ + + + + + I +D + +KL+ N A+ + E Sbjct: 64 DGFPNFKISVASNFQNIEERKNELTVFSDISKEDSSYAIAQKLVYSNKLALDNLIGSLDE 123 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E++++ + ++ ++ I G GAS ++A + K ++ F + D H L+ P Sbjct: 124 ERINQALNLIYDSQTIHFFGQGASSVIALDSYHKFLRTRFLCNYISDYHMQLSYATKLGP 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D + S++G E A + ++ +TG L + +S +EE A S Sbjct: 184 NDCVFLFSHSGETNETIEVARILRNNQVNIIVLTGNHHTDLVKLSSISFVVDSEESAFQS 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAP---ERIRHSEALVKK 280 ++++ + D+L++AL+ D E+IR + A+ KK Sbjct: 244 ETLTSRILYLTIIDILYVALMYHDEAKNKDSLEKIRKALAVTKK 287 >UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax=Gammaproteobacteria RepID=RPIR_ECOL6 Length = 296 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 130/272 (47%), Gaps = 4/272 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R + +G+ +++ ++ ++LL + + + + +A VS++ +VK ++ LG+ GF L Sbjct: 20 LRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNL 79 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + AL + + + + +++ D+ + V K+ + ++ + +++H Sbjct: 80 RSALEDYFSQSEQV----LPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAA 135 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 AR+ L G G S + + K ++IG A D H ++ + D++L + Sbjct: 136 RFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVV 195 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 +++G ++ A + + G K++ IT + + + A + + + A E + SA Sbjct: 196 THSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARI 255 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 Q L D F+++ Q ++E A ++ + A+V Sbjct: 256 LQLTLLDAFFVSVAQLNIEQANINMQKTGAIV 287 >UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH25_PETMO Length = 283 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 128/277 (46%), Gaps = 4/277 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLL-QPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 + R +S+KK+A+Y+L + + ++ +LA + G S++++ +F +K G++ F Sbjct: 8 LNSRMPTFTKSEKKVAEYILNSKKEDITRITITELATKCGTSEATIARFVKKAGFETFQD 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL L+ I I +D + + K+ + ++ +T ++ + Sbjct: 68 FKLTLALDNNEDIFEEEKDI--TIFKNDSPQEILRKVKLGSLKSIESTTSILDINNFLQA 125 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +RSA+RI + G+G+S VA+ +KL ++GF + A+ D H + + DL + Sbjct: 126 ANFIRSAKRIEIYGVGSSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATLNFGDLAIG 185 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G ++ + + + G +++T + + + + L + E +++ + Sbjct: 186 ISQSGSTKDTVDSLNVAKKHGATTISLTEHANSPITKYSDVVLEIFSGENPVKTSAGRSI 245 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHS-EALVKKL 281 Q ++L L + E A + + A+V KL Sbjct: 246 LVQIFAVEILSGLLYSIEYEKALTTGKDTARAVVNKL 282 >UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15N75_PSEA6 Length = 282 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 107/278 (38%), Positives = 162/278 (58%), Gaps = 3/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I+ L+ S+ KLA ++L + R LSSQ+LAN GVSQSSVVKFAQKLGY Sbjct: 1 MSTFTKIKAIKDTLSNSELKLAKFVLSSSNAVRDLSSQELANVVGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+PA KL + +AL S + +H +I +D + V EKL+ A + T N+N E Sbjct: 61 KGYPAFKLGVIDALNSTASEGN--LHGKITLNDSFKQVSEKLLSSKVAVLTETKNLNEEA 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 H+ V +L+SA+RI++ G+G S LV ++F++KL K+G A DMHA LA S + Sbjct: 119 AFHQAVELLKSAKRILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATLSEN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+ AIS +G RE+ + + KV+ +T + + A LY++AEE++ + Sbjct: 179 DLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESARLS 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SI A AQ + D+LFIA+ Q + + + ++V Sbjct: 239 SIMARTAQEFIIDILFIAITQS-SRQGRQLLEKTNSVV 275 >UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MLD6_SALAR Length = 293 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 2/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + + L ++D K+A Y+L QP ++LA E GVS++++V+F +K+GY Sbjct: 7 NVRVYLANILGSLGETDAKIAGYILQQPGLVVQFPVKKLAQEIGVSEATIVRFCKKVGYG 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK L L ++ + S+P I DD V +K+ + T+ + + Sbjct: 67 GLLNLKADLKRELLAENDL-SLPSSPDIFLDDSRNDVAQKIALTIETSARETIGLLDMKI 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V SARR++ G GASGL A K+ ++G ++ A D + + DD Sbjct: 126 VKPVVERFLSARRVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLKRDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A S++G E+ A + G LAIT + L + A+ T E S Sbjct: 186 LVVAFSHSGETPEVVNAFRLAQKKGAYTLAITHSPHSPLNELANTFWLTSGEAGPMQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQDL-ELAPERIRHSEALVKKLV 282 IS +Q + + L + + +L + + E L+K+ + Sbjct: 246 ISTRISQLFIIEFLCTEITRHNLRDSGMTGLSIKEILIKERI 287 >UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYS8_9CLOT Length = 282 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 4/276 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +I Y L ++KK+ADYL+ P A +S +LA+ SQ+++++F +K+G KGF Sbjct: 9 DQIFSTYDSLYDAEKKVADYLISHPSEAIEMSVSELASHCDASQATIIRFCKKIGCKGFH 68 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK+ L+ Q + I N+I D + ++ + AT + + E+L E Sbjct: 69 QLKIKLA---GEQRQQEEQVISNEIDI-DQMDKSLNNIMISKVEEIKATFHNFNPEELRE 124 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V ++ A I +G + +A + ++K ++G A + + A + D+ Sbjct: 125 IVDLIIHANLIEFAAMGDTIPIALDGSYKFNQLGLKAVSSTIWESQEAFSRTLRKGDVFF 184 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AIS +G + L + + G +AIT + + L + H L T E + Sbjct: 185 AISASGASKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCDHVLLTATREHIFHDQVSFT 244 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + D LF+ L + +H +++ ++ Sbjct: 245 RMAAMSVIDTLFLLLFSTKWDSFENVAQHEQSVAEE 280 >UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=16 Tax=Enterococcus RepID=C2H8J8_ENTFC Length = 286 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 140/280 (50%), Gaps = 6/280 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI + + ++KKLA+Y++ + +++ +LA +G+S +VV+F++K+G+ Sbjct: 5 MSVISRIESMMEDYSSAEKKLANYIIGNIEKVPTMTANELAEASGLSAPTVVRFSKKIGF 64 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + K+ +S L + + + I ++ + KL A+ T+++ EE Sbjct: 65 QSLTDFKITISTELQTGIDEG----FSDIEANESFYSIKNKLGNNAQVAIKETVDILEEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V L +A + L G+GAS LV ++ K ++G +D+H LL + ++ Sbjct: 121 TIQKVVECLETAESVFLYGVGASSLVVEDILQKWSRVGKPIIFEKDIHVLLPQLVSNEKK 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNS 239 +L +S +G ++ A+ + +++A+T F N L + A + T +E S Sbjct: 181 KVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVLVQTSRPKEITNRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ D++F + ++ E E+++ + ++ Sbjct: 241 AATNSLLAQFATIDIIFYFYMAKN-ESLSEKVKKTREAIQ 279 >UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI4_9GAMM Length = 278 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 5/276 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L + ++S K+A ++ P+ ++ LA +AGVS+ +V +F LGY Sbjct: 1 MTLLTDLADPLSKRSKSAHKIAACVVANPEAILASTTASLAAQAGVSEPTVNRFCTGLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP KL+L+ LA + + I DD V K+ + A++ T + Sbjct: 61 KGFPDFKLSLAAELARKQP----RMTRDIDPDDSAAKVAAKIFESTQASLSNTQDHLDLA 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + +AR I L G+GAS VA + KL++ A D+ D Sbjct: 117 ALQDVVAAMSNARSIALCGLGASASVALDAQHKLLRFPIPIMAHTDIINQRVVAAGLGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ ISYTG + A+ + G +V IT + L L + E Sbjct: 177 DLLICISYTGRTTAMIELAELAVSRGCQVAGITS-PHSPLANTCPLVLGVESGEDTDRYT 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 +++ AQ ++ D+L L + E + ++ + Sbjct: 236 PMTSRIAQLVIIDILATCLALEQGEAFADHLQEVKR 271 >UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU7_9FIRM Length = 281 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 130/280 (46%), Gaps = 2/280 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ Y L+ S+ ++ Y+L +S+Q+LA ++ S ++V++ ++L Sbjct: 3 MSVLVKLRE-YHTLSNSENEVRMYILRNSKKVISMSTQELAAKSYTSPATVIRLCKRLEL 61 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ LK+ L+ + + + + V + D L + +K+ + ++ T + Sbjct: 62 KGYSELKIQLASEIKAFETMNLDVVDQTTFKKGDSLTELIDKVTDISIHSIEETRLLLDY 121 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + A I L G+GAS +A + +K M+IG + + + + S Sbjct: 122 EVLLCVARQIMDASIIDLYGVGASNNIAFDAGYKFMRIGKSISCLSLIDRQRIQAINSDS 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + ISY+G E+ A + + ++ITG N L + L+ + E + Sbjct: 182 SHFAIIISYSGETPEIIEIAKILEKNNVPAVSITGSIQNQLVNLVEYNLFVSSRESNFRN 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +I + + + DL++I I + + + +R+ + + K Sbjct: 242 GAIVSRTSTLYMLDLIYITCISLNYDDSAKRLGQTLTISK 281 >UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillaceae RepID=Q03CI3_LACC3 Length = 280 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++++ L+ +KKLA YL PD A + +L+ GVS +++ +FA+ LGY Sbjct: 3 DFLVQLQIYKPNLSGQEKKLAAYLQAHPDHASQANISELSQLTGVSTATISRFAKALGYT 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F AL++AL++ + + ++ D + + +K+ N A+ TL + Sbjct: 63 NFQALRMALAQTSPEDDHA----LFAELSPKDSVDTLAQKIFTSNIDALRTTLANLDTDA 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + A + L G+GAS LVA + K ++ A D H L P D Sbjct: 119 LTKAVKWITHAEHLGLFGLGASNLVALDGYHKFLRTAIPVAYAADYHMQLMAATHLGPRD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ S++G ++ A+ + ++ ITG + L + A +AEE + + Sbjct: 179 AMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMADAAFVAVAEESRYRTEA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A A+ + D LF+ + R A + Sbjct: 239 LHALIAEISIMDTLFMISAIKTDSQTAPLFRQVRATI 275 >UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNS3_LACPJ Length = 292 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 3/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR Y L+ +D+K+ADY++ P S LA GVS ++V +F +++ + Sbjct: 12 VLTLIRSYYPNLSVTDRKIADYIIADPIKTAAQSISDLAAAVGVSTATVSRFVKRISFSS 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ A E + + + + E +++ T V +E L Sbjct: 72 FRDFSRELTA--AEPIEQTNAEAFQDVEKQTTFKGIAESTFNSIRSSLDQTSQVMTEADL 129 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L +AR I G+G S + A + K ++ G A D L + D+ Sbjct: 130 KRAVELLLNARSIGFYGLGGSAVAALDGYHKFVRTGIPCAHNSDYDMQLMQAAQMNASDV 189 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG ++ + V+A+T F + L + ++ ++AEE S + Sbjct: 190 AVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTVAFISVAEEINYRSEGL 249 Query: 243 SACHAQGMLTDLLF-IALIQQDLELAPERIRHSEALVK 279 ++ AQ + D LF + + ++E+A R EA+ + Sbjct: 250 TSLIAQMSIIDSLFLMTAVHGNIEMAESLGRVREAISQ 287 >UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C246_9CLOT Length = 292 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 115/278 (41%), Gaps = 3/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R L ++K++A+++L P +S ++LA ++++V+ + +G Sbjct: 9 NILATTRFLLPSLTAAEKRVAEFVLASPKEVTRMSLKKLAVRCECGEATIVRLCKTIGVS 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK L L ++ + + ++ + N + TL V + E+ Sbjct: 69 GYAELKSLLETQLQLPAVKEESV---RLSTGQGMGEIVARVFELNILNLRRTLEVAAVEE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +L +A +I IG + + + +IG++ A D + D Sbjct: 126 YENACEVLSTANKICFFAIGDAMFPCSYASLRFRRIGYDCYADSDADVQIVNACNMKEGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G +++ A G + IT + L + + LY + + + Sbjct: 186 VAIAISHSGRTKQVVEAMRIAKSRGAVTICITKAGKSELTKYSDIVLYNVTTDTTVDKEI 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ A+ + D +++ ++Q+ + R++ +K Sbjct: 246 IARRVAEQAMLDAVYMGVLQKMEANSFARLQEVSENLK 283 >UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RHA3_9MOLU Length = 288 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 2/275 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI+ Y L S+KK+ADY+L LS LA E VSQ +V++F + +GY F Sbjct: 7 FRIKTIYNILRPSEKKVADYILNYCGKLEDLSMTLLAKEVAVSQPTVMRFVKAIGYDSFK 66 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KL L++ + + + I DD + + K++ T+ + L S + Sbjct: 67 QFKLELAKNY-DKENNIDILYGFSINTDDKIMDLPGKIVATATSMLENALKSLSLVNYQK 125 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V ++ ++ I + + S VA + KL+ +G + D + + D L + Sbjct: 126 TVALINQSQHISIYAVENSMGVAHDLMTKLIYLGKSVTCHSDYYLQSIDASNLTRDSLAI 185 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 ISY+G + G + +AI F L + L T + +Q +I + Sbjct: 186 GISYSGNSKNTVEVLKIAKDAGAQTIAIVNFENTMLTRYGDIVLST-SNDQFLYGDAIFS 244 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AQ L D++++ +I D + +++ H L+K Sbjct: 245 RTAQIALVDMIYMGVIISDYDNYTKKLDHYSRLIK 279 >UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK74_SEBTE Length = 284 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 138/277 (49%), Gaps = 6/277 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++++ Y L +S+KK+A++++ + + ++S ++ + V Q++V++F++KLGY F Sbjct: 12 VKLKSVYNDLTKSEKKIANFIMKNFEKTKTMTSYDISKKVNVGQATVIRFSKKLGYSSFN 71 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L ++++ + I D + K+ + + TL +N E Sbjct: 72 ELINSINKLDQEDI------LEKNISLGDDIATTNTKIANQYIDVIKLTLELNPVYVFEE 125 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + + +A RI++ GIG S +V+ +F KL ++G NA D H + + +DLL+ Sbjct: 126 VIEAIIAAERIVVLGIGNSAIVSTDFVNKLARVGMNAFTNLDTHLQFSMISNLGKNDLLI 185 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G RE+ AA + ++++IT FT N L + L T + + + ++ Sbjct: 186 LISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTASFDINLRLDATTS 245 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q + D++FI +++ D E I +S+ VK L Sbjct: 246 RITQFTIIDMIFINILKTDFSKYKEIITNSDNAVKLL 282 >UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus RepID=C2HLD1_LACAC Length = 284 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 135/278 (48%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ + L + ++ L DY++ P+ S Q+L+ + G+S +++V+F +++G Sbjct: 3 NIFSIIKGKKSQLPKKEQLLGDYIIANPENVISSSIQKLSKDTGISTATIVRFCREIGTN 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL L A +S + +++ + + + + +A+ AT + ++ Sbjct: 63 GFSDLKLQLVAAQSSVNNND----YHEFDAGEGIAAIKNTMAARFESAIEATQSGLNDNS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V + ++ I++ G GASG+VA + K M++G N + D+H LA + + + DD Sbjct: 119 VEKAVRKIYNSSSILVYGAGASGIVASDMYQKFMRVGKNINYISDLHVALAQLASFTSDD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATNSA 240 LL+ IS G E++ + G L +T + + ++A L T E + S Sbjct: 179 LLILISNDGKTTEVSDIQKVADKFGIPTLLLTANPRSFVAKKADLVLLTQDIGEPSIRSG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + ++ +Q + D+L + + + ++++ S Sbjct: 239 ATTSLISQMFVVDVLVFSYVSVHSDEVLKKLKRSNEAT 276 >UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=Fusobacteriaceae RepID=D1AYR1_STRM9 Length = 281 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 139/275 (50%), Gaps = 1/275 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ S+K +A +L+ + + ++++A E S S+V + +K+G Sbjct: 1 MSILVKLREN-NDFTSSEKDIAKFLMNNYKNIKKIDARKIAKETFTSVSAVTRTCKKIGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L E LA+ + +++ I ++ R++ EKL K + +++ T + + Sbjct: 60 RGFQEFKIDLIEELANLEQQKLEFVNSDIERNNDTRMIIEKLNKLSISSLKETKLLQDPD 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V +++ + I GIGAS +V + +K M+IG A S+ D Sbjct: 120 IIDKVVKLIKKKKVIDFYGIGASHIVCLDAQYKFMRIGKVCNAFGPFDLQYIQAVNSTDD 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L + ISY+G+ ++ ++ + G + ++IT + N + A+H LY ++E SA Sbjct: 180 NLAIIISYSGMTEDIIKISEVLRNKGIETVSITMYGSNKVASNANHNLYVTSKESLKRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +I + + L D++++ + + +I ++ Sbjct: 240 AIYSRISMLNLIDVIYLKYSNMNFDEVSVKINETQ 274 >UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X148_ENTFA Length = 295 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 133/276 (48%), Gaps = 3/276 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR + L+ ++KK++DY + ++ + LANE GVSQSSV +F +K+GY GF Sbjct: 9 RIRIKKPNLSLTEKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKKIGYSGFQE 68 Query: 66 LKLALSEALASQPESPSVPIHN---QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K+ ++ QP +V N I DD + +K+++ N ++ ++E L Sbjct: 69 FKIDIARNSNYQPTFQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTKELL 128 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + ++ SA+ + G G S +VA + K ++ + + D H L+ V + +D Sbjct: 129 DNVLALMYSAKTLHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTSEDC 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + S++G +E A ++ + K++ +TG + + L + + + EE + S+ Sbjct: 189 VFIFSHSGKTKESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEEGLFRAESL 248 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ + + D+L+ + + + + ++ + Sbjct: 249 ASRISYLTVMDILYTNTMYHNFDQNADSLKKIRDNI 284 >UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY6_HAHCH Length = 285 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 133/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L +S++K+A+ +L P+ H+ LA EAGVS+ ++V+F + + + Sbjct: 6 DILSWLRQNRDTLRKSEQKVAECVLRNPNDVIHMRIVDLATEAGVSEPTIVRFCRTICFD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + K++L++ LAS + R D L+ +G K+ + +++ N + ++ Sbjct: 66 SFQSFKVSLAQQLASMQRQTP----FRARSGDSLQQLGAKIFSDVQSSLQQVFNQLAWDR 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ R+ G GAS VA + K ++ + A D + +D Sbjct: 122 IEQACAWISNSPRLYFFGYGASAAVAADAQQKFFRLKPSTHACPDPDTQMLIAGLVETND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS++G L + + G KV+AI +AL A+ + +E A Sbjct: 182 VIIAISHSGRTNNLIQSCMQARASGAKVVAI-SPPQSALANIANLNIGVSVDENADAFTP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +++ A M+ D + L Q+ E +++ ++ + L Sbjct: 241 LASRLAHLMILDTIASNLFQKLDEQHVQKLNQAKKNLSSL 280 >UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteriaceae RepID=A4WDW6_ENT38 Length = 274 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 128/281 (45%), Gaps = 12/281 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+RQ G + + +KL ++L P +L+ +LA E+ S++SV + + LG K Sbjct: 6 NLLLRLRQGVSGYSPTQQKLGSFVLNDPSRVLYLTITELARESDTSEASVTRLCRTLGCK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ + + H ++ D + + E E+ A+ T + E Sbjct: 66 GYTEFKMALALDVQRE--------HVPLKKGDEIDEIVE----ESILALQDTSRLLDREI 113 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +R + + G+ AS ++ +KL+++G A DMH + DD Sbjct: 114 LLKAAQALHQSRSVYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLTSDD 173 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G R+L + G VLA++ + L + L E ++ + Sbjct: 174 LVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAKPEGPLSAGA 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++A +L +LL +I D + + A + L+ Sbjct: 234 LNAKVGVMLLVELLATTMISLDDRYGDASQQTASATLPLLL 274 >UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2J8J9_FRASC Length = 293 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 4/260 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR L+ +++++A +L P H S +LA +G S ++VV+F Q LG +G Sbjct: 18 VLERIRALSASLSSAEQRVARQVLADPVAMIHQSVSELAQVSGSSPATVVRFCQSLGLRG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKLAL + +++ D + K++ +A+ L Sbjct: 78 YQELKLALIRETLPVERQ----LVDEVSAADGPDEIAGKVLGGAASALTEAARGIDGGVL 133 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ +A R + +G S +A + A++L +G +A D H T + + DL Sbjct: 134 AAIADLVVAAPRTLFVAVGTSAPLAMDAAYRLTTVGVDARFAGDAHVQHVTARMLAAGDL 193 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +A+S+TG E A + G AIT F + L + H + + E A ++ Sbjct: 194 CVAVSHTGSTAETLAAMRAAVDAGAHTAAITSFARSPLTELVRHAVVVGSRETAYRIEAM 253 Query: 243 SACHAQGMLTDLLFIALIQQ 262 ++ + D LF ++ + Sbjct: 254 TSRIVHLSVLDALFALVVVR 273 >UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID=A0Z4E2_9GAMM Length = 291 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 5/275 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I+ GL++SD K+A +L P+ A H S LA +A VS+ SV +F ++LG Sbjct: 6 NVLTQIQAALPGLSKSDTKIAHVVLADPEAATHASIALLAQQANVSEPSVNRFCKRLGAT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P K+ L+ +L + I + +D + KL+ A+ + Sbjct: 66 GYPDFKIWLARSLVAGVRY----ISQVVDPEDTVTTYPGKLVDNTVNALLLAREQLPLKT 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A RI G+G S VAQ+ K + D L S D Sbjct: 122 LEVAVEHLDAAGRIYFFGMGTSAAVAQDAEHKFFRFQTPVTTHTDPLMLRMLAAGGSQGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG + AA G V+++T + L Q + + A E + Sbjct: 182 VFVFISHTGRTEAIVDAAALASASGATVISLTA-QDSPLAQVSHCVIGLEAPENTEDYLP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 +++ ++ D+L + + E E + + Sbjct: 241 MTSRIVHLVIIDILVTGVTLKRGEPCIEHLARIKE 275 >UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF8_9LACT Length = 283 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 138/279 (49%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RI+ L S++K+ +Y+L P+ +++ QL A + ++V++ ++G Sbjct: 5 NILGRIKSVLDDLPNSERKIGEYILTYPEETIKMTTSQLGIAAESNSTAVIRLCNRIGVN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ LS + S ES + +I ++ + + KL+ +M T+++ +E Sbjct: 65 GFTKLKVNLSAEIVSVDESG----YAEIEAEETIGTIKNKLLTNAFKSMEETISLMNEFD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ SA + + G+G S ++A+N K ++G D H L++ + A+ + Sbjct: 121 IERVIELIESASMVYVYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAPKNA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L IS +G RE+ + K + +T F N+L +A + + T+ ++ + Sbjct: 181 LFFGISNSGETREIIELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDSQFI 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+ HAQ + D+LF + + ++ ERI+ S + + Sbjct: 241 SSSLHAQLIAIDVLFYSFLSKNYVAGTERIKQSREEMNQ 279 >UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK0_9FIRM Length = 364 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 130/281 (46%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +++ + +K + +Y++ P+ ++ + LA E S+S++ +F +K GY Sbjct: 81 MSFFLELQKNHSS-TPVEKSIINYIINHPNEVIEMTMEDLARETYTSRSTISRFCKKNGY 139 Query: 61 KGFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF +LK+ L+ L + S D + + + ++T ++ T+ N Sbjct: 140 EGFNSLKMQLAIELNLFLKDEMSSSTSLLFEKGDNASSIIDNITSQDTYSIIETVRTNPV 199 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + + + + R ++ G+ SG++A + + ++G +L + P Sbjct: 200 EHIEKLADKILNCRHVVFLGVQFSGIIAYDAHLRFSRLGIPCKYFNTECDILTYSYFADP 259 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ SY+G + AAD + G + ++T N L + + LY + + N+ Sbjct: 260 QDVVIIFSYSGKTAVILEAADHIRGKGTFLASVTKNYNNELLEISDLHLYINSIDDPENN 319 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+S+ A L D+++ L+ + + +++ + L KK Sbjct: 320 LSLSSRIAALCLVDMIYAVLVNKKSDNFYDKLMQTNKLYKK 360 >UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=Enterococcus RepID=C0X6G8_ENTFA Length = 283 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + IRQ+Y+ ++ +K++ADY+L P L++ ++A+ + S +SV +F+++LG+ Sbjct: 1 MEPIRSIRQKYKDFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + LKL+++ A+ + I + DD + + K+ A + ++ Sbjct: 61 DSWEELKLSIAAVQAAS--NGKKDIDPIVAADDSVDTICMKVESLLNATIEDLFYTVDKQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ A +I L GIGAS L N K + G A D H +L + ++ Sbjct: 119 ALERAIAHVKKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYATAQ 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +SY+G+ +E +A + G V+ IT ++ + L E Sbjct: 179 DILITVSYSGLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLIRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPER-IRHSEALVKKL 281 +IS+ + + D+L++ IQ DL+ ER + + LV +L Sbjct: 239 AISSIASSMAIGDVLYLGSIQDDLDTEIERNMIETSQLVSRL 280 >UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F2FF2 Length = 285 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 1/274 (0%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I R L Q++ ++ ++ +S +LA+ V ++S+++F +KLGYKG L Sbjct: 11 INTRINELTQTEIRIYQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCKKLGYKGLSEL 70 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K L + S + + + + + ++L N A+ TL + E+ L Sbjct: 71 KTTLRLETDTDDTLLS-KVTSLDEQTNSMTGIAQQLANNNYFAINETLALQEEQALVRAA 129 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 L +A ++ GIG S + ++ M+I N A+ D H + D+++AI Sbjct: 130 DYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNVGKKDVVVAI 189 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G R++ A + G + I+ ++L Q A L T S S + Sbjct: 190 SHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPYQSDSSTITA 249 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D+LF AL+ + E+I S ++ K Sbjct: 250 AQSFMVDVLFNALLFINRGGNVEKIISSLDIINK 283 >UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=Firmicutes RepID=B1R0U2_CLOBU Length = 284 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 124/276 (44%), Gaps = 2/276 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y +++KK+ADY+L ++ +LA AG S ++V +F +K K Sbjct: 6 SIIDTIYAEYNSFFEAEKKIADYILKYGTKLIEMTISELAEAAGTSDATVTRFCRKCNMK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L++ L+ + + + ++ ++ ++ M T+ +EEK Sbjct: 66 GFHHLKITLAKELSESQKEDTRVSGD--VSEENIKESLNNILFNKIEEMKQTILTINEEK 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 E + +LR+A + +G + VA + +K ++G + A +A +D Sbjct: 124 FKEILQILRNAGIVQFVAVGNTIPVALDGCYKFNQVGVASVANTIWETQIAYTYNLKEND 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + L + G +AIT + L + +++ + T E+ Sbjct: 184 VVIAISNSGASKRLIDVIEIAKEKGAVTIAITNSDKSPLAKLSNYHIKTATREKLFLEEY 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + + ++LF+ + ++ RH +++ Sbjct: 244 YFSRISAMTVIEILFLFMTVGKHDVYKTLSRHEQSI 279 >UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2D0_9BACL Length = 284 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L +S++K A Y+L LS +A++AG S +++ + + LG Sbjct: 5 SVLTQMEAMLEQLPESERKAAQYILTASAEVSGLSIHAVADKAGTSAAAITRLCRSLGLS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP LK+ LS A P P + I + ++ V +K + + A+ + E Sbjct: 65 GFPDLKMRLSVDNAK----PQRPGYYDIERGETIQNVIQKTVSNSLQAIQDMMLHLQPEL 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V R A I + G+GAS +VA + A K +++G A A++D H + A + ++ P Sbjct: 121 IEQVVDSFREASVIHMYGVGASAIVAADAAQKWLRLGKQAFALQDEHLIAAALASAPPGA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 L + ISY+G +E+ + G + + ++ F + + + A LYT A E S Sbjct: 181 LFMGISYSGNTKEVLQLFRVAQKYGVRTIGLSRFGNHKVAELADLMLYTPQAPEATLRSG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + S+ AQ ++ D+LF A E R+ + Sbjct: 241 ASSSRLAQLVMIDILFFAYASTQYEETILRLSQTHEAT 278 >UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD92E Length = 288 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 2/268 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y L ++K+LADY+L ++ LA G S ++VV+F +K G Sbjct: 6 SILEKIFSIYPVLFDAEKRLADYVLQNEAKVVDMTVSDLAAACGTSDATVVRFCKKCGCN 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ +A++P + + + + + + + TL Sbjct: 66 GFHHLKINMAKEMATKPSDGAPIVGSNELDCARMDVSLRNIFASKQEELRQTLAEIDPAV 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V +R+AR I +G + VA + A+K ++G A + +LA + ++PDD Sbjct: 126 FRSVVERIRAARFIFCAAMGNTIPVAMDAAYKFNELGLTAISAPVWENMLAMMHTATPDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSA 240 +LLAIS +G ++L G ++ +T +++ + + L+ +++E+ + Sbjct: 186 VLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQERMFFRTF 245 Query: 241 SISA-CHAQGMLTDLLFIALIQQDLELA 267 S S+ + + + ++ L+ + + Sbjct: 246 SFSSTRLSMTAVIEAVYYMLLSVKRDSS 273 >UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n=3 Tax=Listeria monocytogenes RepID=C8JWL0_LISMO Length = 273 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 11/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I + L++S++K+A +L PD +LS LA A V +S++V+F++K+G Sbjct: 1 MDLLATISSYFPSLSKSEQKVAQLILSNPDEVENLSINDLALMANVGESTIVRFSRKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL + SQ ++ + D + + ++ + T + +E Sbjct: 61 TGFQDLKIALVKYQTSQKQNIT----------DESNEAKDLVYRQFVDGLQDTKSFIEQE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + M+ A + + +G S +A + +L ++G V D H V Sbjct: 111 KLEQAAKMIHRAEHVYILSVGTSAFIAMQLSNRLKRLGKFVEFVPDGHLQSIYVTMVKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ + + G V+ ++ F + + Q L ++E +++ Sbjct: 171 DIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQMGDVSLVASSKEFLSDAG 230 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKKL 281 S SA +Q L D L L+ + R ++ALVK++ Sbjct: 231 SFSAEVSQLYLLDTLIKVLVDINPSSYHNIRSLTNKALVKRI 272 >UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=Oxalobacteraceae RepID=A6T0F7_JANMA Length = 286 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR +Y L++S+KK+A +L QP+ A + LA +A VS+ +VV+F + +G+ G Sbjct: 2 LLDSIRTQYDSLSKSEKKVALAVLEQPELAIAENITALAKKAEVSEPTVVRFCRAIGFDG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A KL L++ LA P + +D + +K+ + + N + Sbjct: 62 WQAFKLKLAQGLALAPGTG----DESPMLEDMAADLVDKVCNRSINTLLDLRNSLDANAI 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +L A I G G SG++A + K + G A D H D+ Sbjct: 118 EQALQVLGRANTIEFYGQGTSGIIAADAQHKFFRSGVPTVAYSDPHIHSIAASLLKKGDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS G L + G ++ + + L + A+ + I Sbjct: 178 VVAISQRGSSLSLLRSVQLARSSGAAIVVL-APSGTPLAELATVLIPIDLHFHTDPYTPI 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SA A ++ D+L + L + +++ +++ ++K Sbjct: 237 SARLAHLVVIDILAVGLALRLSPERRKKMLNAQKALQKF 275 >UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=Deinococcus RepID=Q1J2N3_DEIGD Length = 290 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 5/252 (1%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++ D +L+ P+ L+ +L+ AG S ++VV+ Q LG+ G+ KL LS ALA Sbjct: 28 RVIDQILMDPERFLSLTIAELSEAAGTSDATVVRLVQHLGFGGYQEFKLQLSRALAV--- 84 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 S + D + K+ + A+ TL + E V + AR I L G Sbjct: 85 --SRKADLTVEPQDASVTILRKIFDSSNTALDDTLEHLNLEAFSAAVQAMTLARHIELIG 142 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 +GASG+VA + ++ +++G + A D L+T P D+L+A+S++G R ++ AA Sbjct: 143 MGASGVVALSGQYRGLRLGLSCRASTDPGTFLSTCSLLEPTDVLIAVSFSGTRPQVVQAA 202 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 + G V+A+TG L + H L A ++ Q + D LF +L Sbjct: 203 RLARQAGAIVVALTGLGRTPLSKVVHHTLTVSAPGDRYRPEGLATQIPQVAILDALFTSL 262 Query: 260 IQQDLELAPERI 271 ER+ Sbjct: 263 HVAQDPYLSERL 274 >UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FC5_PEDPA Length = 280 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 136/281 (48%), Gaps = 9/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L + ++ ++S++K+A +++ P ++++++++ VS ++VV+ A+K+ Sbjct: 3 NILFTLSNDFEKFSRSEQKVARFMIDYPREVIQMNAEEISDRTQVSPATVVRLAKKICKS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK+ ++ + ++ ++ D L ++ KL + A+ T + + Sbjct: 63 GLPGLKIQVASEIKVDD-----SLYTEVNPSDDLDVMKHKLEFRISHAIGQTNQILLKND 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ A I + G+GAS LVA++F K ++IG + D H L V + P+ Sbjct: 118 VKKATDIVEQADDIYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTH--LMAVGLAKPNS 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY--TIAEEQATNS 239 +L+ +S +G +E + ++AIT + + + ++ L E + Sbjct: 176 VLIVVSDSGETKESCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESGVLRT 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A+ ++ AQ + DLL+ A + QD R+ S+ ++ + Sbjct: 236 AATTSLLAQLYVVDLLYYAYLTQDFSNNKARLVKSKTIIAE 276 >UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB20_PARDP Length = 280 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 3/262 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIRQ +++++A+ +L P TA S A A VS+ S+++F ++L G Sbjct: 15 MLDRIRQSLASFTPAERRVAEAVLDTPSTAITWSISDAARIAKVSEPSIIRFCRRLDCDG 74 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP +L L++ LA +P DDPL + + + + A+ L Sbjct: 75 FPDFRLKLAQQLAKHQPAPQPLARPGSGNDDPLAAMVDDIFQRAGQAIEEARRDLDLGAL 134 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V ML ARR+ + G G+SG +A +L + A A D + + P DL Sbjct: 135 RAAVAMLGKARRVDIYGYGSSGFMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGPGDL 194 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSAS 241 L +S++G+ L + + G VLAI + + A L + + A Sbjct: 195 LFVLSFSGLTSYLISNIEIARKAGAPVLAI-SPKGSIVASLADVNLNLNAYRQSSGRMAV 253 Query: 242 ISACHAQGML-TDLLFIALIQQ 262 + A + D LF A+ ++ Sbjct: 254 PTGRVAPMYVLLDALFAAMAEE 275 >UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0I0X8_VIBCH Length = 282 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 128/274 (46%), Gaps = 6/274 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R+R +G + K +AD+++ D+A++L+ +LA + S+++V++ + LG+K Sbjct: 8 NLLSRLRYGMEGYSPKLKTVADFIVSNADSAQYLTITELARDTMTSEATVIRLCRDLGFK 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ ++ P +N + +D R + + ++ T + ++ Sbjct: 68 GYSDFRMALAIEIS----QPQFTKNNDVAKEDGDR--IDDATQSAITSLQDTSILIDRKQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ M+ A I G+GAS +V + +++L +IG ++ D H S+P D Sbjct: 122 INRICQMIHQADNIHCVGVGASSIVGRYLSFRLTRIGKSSTMFEDTHIAAMRAVKSTPSD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L AIS +G +++ A + V+++T + L + + E + Sbjct: 182 LWFAISSSGSTKDVVYVATRAKKQQSPVVSLTNIRHSPLSVTSDEVMVAARPEGPLTGGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++ + +L D+L L+ + E A +E Sbjct: 242 FASKVSALLLVDILINQLVAEHAEYAESVKDTAE 275 >UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Fusobacterium RepID=UPI0001BC57B3 Length = 538 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 137/254 (53%), Gaps = 3/254 (1%) Query: 28 QPDTARHLSSQQL-ANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPI- 85 + +++ A +++V+F++KLG+KGFP KL+LS+ + ++ V I Sbjct: 281 NKRDVLNSIEKEMKAENIYQGGTNIVRFSKKLGFKGFPDFKLSLSQDIGNRKAESHVNIM 340 Query: 86 HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGL 145 H +I+ D ++G+K+ ENT A+ T + ++L + V M+ AR+I+L G+G SG+ Sbjct: 341 HEEIKPTDTFEIIGKKVATENTMAVNNTYEITDFKELEKAVKMISEARKIMLAGVGFSGI 400 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 VA++F +KL+++G D H L+ + + +D+L IS++G E+ A Sbjct: 401 VAKDFHFKLLELGKQTLFENDTHMQLSYLATMNENDVLFVISHSGKTLEVFNLAKAAKNR 460 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 K++ +T + +++ L T+ + + ++S +Q + D+++I L+ ++ + Sbjct: 461 KVKIITLTSVVQSPIRELGDIKLSTVEMKSDFRATALSPRISQLTVIDMIYIKLMLENED 520 Query: 266 LAPERIRHSEALVK 279 L + I ++ LVK Sbjct: 521 L-QDYIFNAIELVK 533 >UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=Q1WQV4_LACS1 Length = 274 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 9/262 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I + L++ ++K+A +L P + ++ +LA +AGVS +++ +F +++ Sbjct: 1 MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+ + AS PE P +G+K+ + + T + Sbjct: 61 SDFHDFKLKLAISAASSPEVPVSS---------ESDSMGDKVYEFYQKVLQGTWKQLDTD 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +H V + ARR+ + G+G+SG AQ F +L+++G A D H + + D Sbjct: 112 TIHNIVHAITKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSD 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G ++N+A + G K+++ITGF + L + ++ N+ Sbjct: 172 DVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWSAVVKNSNFVDNTR 231 Query: 241 SISACHAQGMLTDLLFIALIQQ 262 I++ A + D++ + L+++ Sbjct: 232 FINSQLAIVYVIDIITMELMEK 253 >UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UGP6_SINMW Length = 284 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 8/263 (3%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 R+R L+ +++++A ++L D + S +A VS ++V++ + G++GF Sbjct: 15 RLRSVLPKLSDAERRVALWMLKNVDLSIRQSMSAIAQATDVSDTTVLRMCRTAGFEGFTD 74 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LKLAL++ E H+ + +L + T A+ T V E + Sbjct: 75 LKLALAQEPREAIE------HSSGEPEASALQAAGRLFRAITQALNDTFGVLDEATFAKA 128 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + ++ +A+ I++ G+G SG+VAQ F + +++G A D + + P DL++A Sbjct: 129 LDLVANAKHIMVGGVGGSGIVAQAFYQRCIRLGLRCDAPIDSQLQIMHAALTGPGDLVVA 188 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 ISY+G+ + L E G L ITG + +AL + A L +++ EQ S ++A Sbjct: 189 ISYSGITSDPVLVLQEAKARGASTLCITGNSSSALARLADVVLVSVSHEQG--SEPMAAQ 246 Query: 246 HAQGMLTDLLFIALIQQDLELAP 268 AQ L D L+ AL+ ++ E A Sbjct: 247 IAQMTLVDALYAALVARNPEPAQ 269 >UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=A6LRG7_CLOB8 Length = 291 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 137/279 (49%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y+ L +++KK+ADY++ + ++ +LA E+ VS++++V+F +K K Sbjct: 15 SVLDKILCIYKSLHEAEKKIADYIINNKERVIEMTVSELALESSVSEATIVRFCKKCDLK 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ + + S I N++ ++ ++ + + ++ + T+++ +E Sbjct: 75 GFYDLKIKIAKEMVNLK---SSNISNELDSNNIMQSL-QNILANKIEELKQTISMMNEGN 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ AR + +G + VA + A+K ++G ++ LA + +D Sbjct: 131 IKRILEAIKGARIVQFAAVGNTIPVAMDGAYKFNQLGISSVTNTIWETQLAFSYTLTKED 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +EL + ++IT + + ++ + + T E+ Sbjct: 191 VVIVISNSGASKELVALLEIANERQATTISITNHENSPVANKSKYHINTSTREKLFLDEF 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + ++ ++L++ L+ +D E A I E + + Sbjct: 251 SFSRVSAMVVIEILYL-LLTRDKEDAYNWISQHEQSIAE 288 >UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BCAC Length = 283 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 129/272 (47%), Gaps = 2/272 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 L++R+ L+ +K++A+Y++ + +S Q LA E VS +++++ KLGY+GF Sbjct: 4 LKLREARDSLSTKEKQVAEYIIANKKNMQSMSIQSLAQENKVSTTTILRLCHKLGYQGFS 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK+ L ++ + S + I +D + V K+ +++ T + + Sbjct: 64 DLKIDLISSINHK--SYGTLLQEDIDINDSMETVNHKVGLIEKSSIEETCALVNLNAFKL 121 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ +++I++ G G+SGLVA+ F ++L+KI + D + V +DL++ Sbjct: 122 ANELISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLDQNDLVI 181 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS++G E + +AIT +++ A L+TI+ E + I + Sbjct: 182 VISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVLHTISTEHVSRLIPIRS 241 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 +Q + ++L L + + ++ + A Sbjct: 242 KISQLTVINMLITNLFIKQYDERIQKQISTRA 273 >UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBM1_9CLOT Length = 266 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 131/279 (46%), Gaps = 14/279 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++++Y + +K +ADY++ D ++++ LA E G S +++ +FA+K+G Sbjct: 1 MDILCEVQRKYNEFSDKEKDIADYIMQHGDKIKNINITDLAKEIGTSGATITRFAKKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +K+ L S + I +D + + + T + +E Sbjct: 61 DSFVDMKIKL----------GSNKVELPINDEDGIFSYT---YQYYNEVIERTKMLIDKE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + V ++ A+ I + G+G+SGL + +L+++GFN + D H ++ S + Sbjct: 108 EIFKVVNEIKKAKNIYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIVSEN 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G +E+ + + G K+++ITGF + + + + S Sbjct: 168 DLVIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYSDIKFIVYNPNFVDRSR 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ + L D L ++ +D+ L+ + A++ Sbjct: 228 FINTQFSAMYLLD-LISMVLLKDINLSNKMQTTINAIIN 265 >UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family n=11 Tax=Escherichia RepID=B7UNF1_ECO27 Length = 281 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 9/279 (3%) Query: 1 MNGLLR---IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 MN + I+ Y L Q++KK+ADY+L + S +L+ ++ S++++V+ +K Sbjct: 1 MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 LGY+G+ LK+AL++ + + S + + + L+K+ + + Sbjct: 61 LGYQGYYHLKIALAKEVINPDNS-----YPDNTDFTDITSLATFLLKKQAEDLIQSTQFF 115 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + E L + +L + I G S +A A+K ++G + + Sbjct: 116 NAEVLESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSM 175 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DL + IS +G + + G K + IT + + L + ++H L T ++ Sbjct: 176 GKRDLAIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIF 235 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 A S + D+L + + ++ E+ R E Sbjct: 236 FEAFDSTRVPAMGVIDMLVLLFMYKNK-AHYEKYRTREE 273 >UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillales RepID=Q02YU6_LACLS Length = 273 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 15/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+++Y+ L +S+KK+A+Y+L + + + + V +++V+F QKLGY Sbjct: 1 MKIETVIKEKYELLTKSEKKIANYVLASKERIVYGTMNDIKKAIKVGDATIVRFCQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ SQ S + ++ ++ T + E Sbjct: 61 SGFSDLKIEVAKESYSQKSSNRTDLTLFFDENE----------NSIIEILHETKSKLDLE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ A I + G+G SG A++ ++IG A+ H L T Sbjct: 111 QFEKSSKLISEASAIYIFGVGLSGNTAKDLEAMFLRIGVPVKAISGSHFQLQTAALLKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G EL + +++ IT + L Q + L T+ EE + Sbjct: 171 DLIIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQTVNEE-FFDGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S++ +Q + ++L ++ L ++ S + Sbjct: 230 SLTGKISQLYICEIL----VKNHERLYKDKSIQSREAI 263 >UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM Length = 289 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 7/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L++S++KL +Y+L P +S+ L+ +S+ ++++F ++LG++G Sbjct: 6 ILTRIESLMPFLSKSEQKLGNYILTHPKDVTDMSTSALSQACDISEPTLIRFTRRLGFQG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL LS S + ++ +D + KL ++ +TLN L Sbjct: 66 YKDFKLHLSANFISNQIDSTPV---KVNLNDSAIEIYRKLASFTINSLNSTLNTLDANDL 122 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + A R+I L+G+GAS ++ F K+M++ D+H L Sbjct: 123 ENATNYIYVAAKQNRKIFLSGMGASTVLIHEFQIKMMRLNIQTIFFEDIHLRLEACANLK 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +DL + + G +E D K++ IT F + + ++A LYT E Sbjct: 183 KNDLFICFTTLGASKENYELIDIAHERKAKIIVITQFGNSQIAEKADIALYTSIIENNLR 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 AS ++ Q M+ D+LF+ + +D ++ K+L Sbjct: 243 LASQTSIILQSMVIDVLFLTIACKDYASITNSVKDFREKFKQL 285 >UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR8_PEDAC Length = 280 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 123/280 (43%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ + + +K++A +++ P +++Q+A++ G S ++V++ A+++ Sbjct: 5 SVVFTLKNQLGDFTKKEKQVARFIIKYPQAVIDSNAKQVADQVGTSAATVIRLAKRVCKN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK L + +I D L ++ +K+ + T Sbjct: 65 GLPELKERLKNETMVNDK-----FFEEIDPADTLEVMKQKMEYRINHTIEQTNRTVKGGA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ A + GIGAS LVA + K ++G A +D+H L A + Sbjct: 120 VRNAAKLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVHLLAAEMSKGRG-- 177 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY--TIAEEQATNS 239 +++ IS +G +E + V+AIT + L ++++ L E S Sbjct: 178 VVVLISNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRS 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ + DLL+ + ++ E +++ S ++K Sbjct: 238 AATTSLMAQLYVVDLLYYSFLKLHFEDNVDQLTKSRKIIK 277 >UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X566_COMTE Length = 282 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 121/285 (42%), Gaps = 17/285 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++ + L ++K++ ++ P +S+ ++A+E VSQ +VV+F + LGY G Sbjct: 1 MLDQVMATLETLTPAEKRVGKLVIENPRRFASMSTSEIASECFVSQPTVVRFCKGLGYGG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L +H+ + D V K++ + A + + + Sbjct: 61 LTQFKQKLRGD----RSDGVPYVHSSVDAGDTSFNVALKVVDSSIATLALFRTYVPKISI 116 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L +A R + G G SG+VAQ+ + ++GFN+ A+ D ++ + + Sbjct: 117 ERASNTLAAAYSEQRSLSFYGSGHSGVVAQDAQLRFSRLGFNSTALNDGYSQVLNAASRK 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++A+S +G +EL + D R G V+A+TG L S L T E Sbjct: 177 EGDVVVALSCSGRTKELLESVDVAKRQGATVIAVTGSGT-PLATMGSIHLATDHLEDIDR 235 Query: 239 SASISACHAQGMLTDLLFIALI--------QQDLELAPERIRHSE 275 +S+ ++ D++ A+ Q LE +RH Sbjct: 236 YLPMSSRLLHLVVIDIVATAVALQIGCGRLQDQLERTQNHLRHRR 280 >UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D858_9CLOT Length = 275 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 117/258 (45%), Gaps = 6/258 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++R L +++ A+YLL LA EA VS+++VV+ K+GY G Sbjct: 11 IKLRGVIGSLGAQERRFAEYLLNSFAGIEKEPIAVLAKEAQVSEATVVRVCHKMGYSGLK 70 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK+ ++ E+ + + G + + E++ A+ T+N+ E+++ + Sbjct: 71 ELKIVVAR------ENETAGSFDGGIGGQYMDELKERVFMGAIRALQDTMNLIDEDEVEK 124 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 +L +A I + G+G S VA++ +LMK+G + + + + + D+ + Sbjct: 125 ATKVLCNANYISIYGVGGSVPVARSLKHQLMKLGIPSNVYNEFQPTIIAAEKYNKGDVAI 184 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS++G ++ A G + IT + +A+ + +T +E + A Sbjct: 185 GISHSGESSQVVEALRIARGKGATTICITSYGDSAITHCSDVKFFTTSETLLNGGDNSLA 244 Query: 245 CHAQGMLTDLLFIALIQQ 262 AQ + +LL++ + + Sbjct: 245 RIAQTSIINLLYLNVALK 262 >UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T6_9FIRM Length = 277 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 135/274 (49%), Gaps = 6/274 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++Q L Q++K +AD+ AR +S QLA+ + QS++++F++KLGY+ F Sbjct: 4 EKLKQVQNELTQTEKIIADFFQNHSLEARSFTSYQLADRLNIGQSTIIRFSKKLGYRSFR 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L LS +L + + +I ++ +K+I++ TL N + + + Sbjct: 64 ELLEDLSTSLTEEK------VKEEIVVNEGTSSTNQKIIQQYQKMAQLTLEFNPPQVIDQ 117 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+ L+ AR+II+ G G S L A+ + + +K+G ++ + H + + + P D+L Sbjct: 118 TVSALKKARKIIVFGFGNSNLFAEYISNQWLKMGLDSFCSANSHIIFSMLSQFGPQDVLF 177 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G E+ AA V+A+T N L + L T+ E T +++ Sbjct: 178 LISESGETPEILKAARIAGHQNVTVIAMTRIQKNRLHGYSDIVLKTVNYETNTRLNAMTL 237 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +Q L D++++ L + D E + I SE L+ Sbjct: 238 RCSQLCLLDMIYLNLYKTDFEHYEKIIAESEKLL 271 >UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus RepID=D0R5V5_LACJF Length = 272 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 11/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + R Q L +S+ KLA+Y+ + + + + L +++V+ +KLGY Sbjct: 1 MEFIQRYNQNKDKLTKSENKLANYIATHTEHVIYDTIKSLGTANNTGDATIVRLCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL++ + K++ +++ T + + Sbjct: 61 SGFSDLKIALAQDSMMTTSKSHEEAQ-------TSSELSSKVL---ISSIEKTEELINPS 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L ARRI + G+G SG A+++ ++IG A A D H + S D Sbjct: 111 VLKQAVSLLAKARRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLLSKD 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G ++ + G K++AIT + + Q L T E N Sbjct: 171 DLVVGLSLSGHTKDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSE-FMNIG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ +Q L D+L + + + + A V K Sbjct: 230 TVAGQVSQLYLCDVLAREYEKLNKVDVDKIKEQALAAVMK 269 >UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C7T7Y4_LACRG Length = 315 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 3/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +++ + L+ ++ LADY+L + ++ Q+A +GVS +SV++F + Y Sbjct: 4 LLAKVQAQLPQLSPVNRALADYVLTDAEAFIAQTTAQIARASGVSAASVIRFVRLFDYPD 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KLAL + +P P+ ++ DD L + KL + AA+ + + + Sbjct: 64 LQSFKLALVRDTQAPALTPLDPL---VQDDDDLPTMMRKLSQTAIAAVRDLPDELDQAAV 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +T LR AR I L G+ AS LVAQ+ KL++ G+ A D H L V ++ D Sbjct: 121 QTAITTLRHARHIYLVGMSASALVAQDLYLKLIRAGYLAIFDADAHTALERVYYTTAADA 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ SY+G+ +E+ LAA + R V+ +T P+ L+ AS + E ++ Sbjct: 181 VVVFSYSGLTKEVVLAAQQARRNQTPVIVVTRAEPSPLRDAASCVIALPPTEPLLRIGAV 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + + ++LF+ ++ +++ + R + L +L Sbjct: 241 TSMFTETYVANILFLGVVHGEIKQTEQNYRATSQLTGEL 279 >UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C842_9FIRM Length = 276 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 122/279 (43%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Y S+KK+ADY++ P +++ +QLA SQ+SV +FA+K Sbjct: 2 ILDTIHGHYNSFFDSEKKIADYIIQHPKEVVNMTIKQLAQACNTSQASVSRFARKCQMDS 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ ++ E S I + E ++ + + AT+ ++ Sbjct: 62 FHHLKVNLARDCVNEIEQKSNTISTS-----DISGSLETILSNKISELTATIRNIDVDQF 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++++++A+ +++ +G + VA + +K +IG ++ +D+ Sbjct: 117 SVILSLIQNAKHVLVCAVGNTVPVALDCMFKFNEIGILTFTSTIWENQVSYALGLDSNDV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS +G ++ EM + G + IT + + + + + T E+ + Sbjct: 177 VIAISNSGESSQVLAVCKEMKKRGVPTIGITNNEDSVVAKECVYHIQTSTREKLFLNEFC 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + ++L++ L + + +RI E L L Sbjct: 237 FSRISAATIIEILYLFLTNA-SDNSYDRISQCEELYASL 274 >UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=D2BPE4_LACLK Length = 273 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 125/280 (44%), Gaps = 10/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ +Q +S+KK+A+++L P + LA + VS++S+ +F +KL Sbjct: 1 MNILDQIQVNFQNFFESEKKIAEFILKNPKKVIDMPIALLARNSNVSEASISRFCKKLNL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ ++ + ++ + L + + + K T + A + + Sbjct: 61 TGFHQLKIELARIQDNE--------NIKVNKNTSLNELIKNISKIKTTELIAATDNLDID 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ + + G + VA++ +++ ++G + D A + Sbjct: 113 NLQSIIKIITNVKLTHFVASGNTIPVAEDASYRFNQLGITSVVFDDWQVQTAFTLNMRKE 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ IS +G + L + +++IT + + + ++ L + + + ++ Sbjct: 173 DLLIVISNSGESKSLIKLINIAKEKKIPIISITNHPDSPIARLSNFHLTSFSRDYFFHND 232 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + L +L+F+ L Q L E I+ E ++ + Sbjct: 233 YYFSRLSAMYLIELIFLILSQDKSRL--ENIKLHEQIISE 270 >UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=Lactobacillales RepID=D0RS60_9STRE Length = 277 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 14/279 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Y L +KK+ADY L LS+Q ++ VS S+ +FA+K G+ Sbjct: 4 NILPVIESVYGSLTHLEKKIADYFLSAEALTADLSAQAVSQRLYVSVPSLTRFAKKCGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ E+ + R + ++ + + T ++ EE+ Sbjct: 64 GYRQFIFEFQESSSESKNVS--------------RDLTRNVLSDYGELLNKTFSLIDEEQ 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ML +A R+ + G G+SGLVA+ ++ M++G A+ D H + +PD Sbjct: 110 FLRVGDMLNNAGRVYIYGQGSSGLVAREMEFRFMRLGMVCKAITDDHMIRMNRVMLNPDC 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G + + A +VG K + +T + L+Q+ + ++ + Sbjct: 170 LVIGISISGETKIITQAIQNAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNN 229 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS ++ D+ + + D + + ++ + +++ Sbjct: 230 ISPQFPVLVVMDIFYAYYMDLDRDHRSQIFTNTLSALEE 268 >UniRef50_P46117 Uncharacterized HTH-type transcriptional regulator in aarA 3'region n=5 Tax=Enterobacteriaceae RepID=YARA_PROST Length = 282 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 4/282 (1%) Query: 1 MNGLL-RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ L ++ ++++LA +LL D ++ +LA AGVS +SV++F +++G Sbjct: 3 MSTLTSKLESLLNRGKGTEQRLARFLLDSRDNFVAMNVAELAQAAGVSSASVIRFTRQMG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+G+ K+ L+ + + + + + D + K + A+ +L + Sbjct: 63 YRGYSDFKVD---YLSDEKQYKAESLSGSLNPYDDTEQIIAKSGQMFITAIEKSLELLDP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E + A+RI+L G+G S +VA + +KL+++ A D+H L+ Sbjct: 120 NTMDEIAQKIVEAKRIVLFGVGTSAIVAYDIFYKLIRVNKYALFSPDLHVQLSYSSNVDA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++AI+ G ++N + G + +T F + + A L +EQ + Sbjct: 180 DDLVIAITAKGNTPDINHMLKLANKKGCSTIVLTRFGQDEAVRLADLVLPYFYDEQLFQT 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I+ Q ++ D LF + E ++ + +L Sbjct: 240 GVITPQVLQMVVFDTLFFKYLTLTNEDVVLALQKEREAIIQL 281 >UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK55_BACSK Length = 268 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 129/277 (46%), Gaps = 16/277 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I+ Y L+ ++K++ADY++ P+ ++ + LA + VS +++ +F +K+G Sbjct: 4 MLQQIQVNYHALSAAEKRIADYVMSAPEELANIHIKDLAAKCSVSVATITRFCRKVGAAN 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+++ +++ ++ E + ++ A + + + +++ + Sbjct: 64 FVEFKMSVRDSIRTEEEGGE---------------LIAEMESIYKAIIGGSRELINQDDI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + T+L +A RI + GIG+SGL Q ++LM++G D H ++ + D+ Sbjct: 109 VQAATLLENANRIEIYGIGSSGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTAADV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +LAIS +G ++ A G V+ +T L + A L + + + + Sbjct: 169 VLAISNSGHTVDIQEAVALAKENGATVILLTNHEHTPLSEMADLLLLSFSPKPFYARGFL 228 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +A + + D L ++ Q+ E A R + AL + Sbjct: 229 NAQLSIVHVLD-LISLVLAQNEERAKARRKTLHALSQ 264 >UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VMT8_LACPJ Length = 282 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 8/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL-GY 60 + L I R + +++++K+ Y+L + +S+ +LA GVS ++V +F + L Sbjct: 3 SVLFTIHNRLENFSKAEQKIGRYILDHTNAVIKMSTAELAAATGVSTATVARFGKTLIPD 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PALKL LS + ++++I D L + KL T + T + Sbjct: 63 GGYPALKLRLSAE-----STVDQTLYDEINPKDSLDAIKSKLALRITHTIDETNRSLDDA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ + + G+GAS +VA +F K ++IG +D H L + + Sbjct: 118 ALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQDPHLLAVGMTTQRQN 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA--TN 238 +LL IS +G + E A+ + V+ ++ + L + A L E+ Sbjct: 178 VVLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEENQTAR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +A+ ++ AQ + DLL+ I D E +++ S +K+ Sbjct: 238 AAATTSLMAQLYVVDLLYYTFITNDYERHIKQLVASREAIKE 279 >UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=Micrococcineae RepID=A9WVK2_RENSM Length = 346 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 122/279 (43%), Gaps = 2/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R++ + ++ + K+A YL+ +P LS ++LA+E G S ++V +F + +GY Sbjct: 36 GVVNRLKAQLPEMSGAMSKIARYLIEKPLAPLELSIKELADETGTSAATVTRFCRLIGYT 95 Query: 62 GFPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ ++ ++ L ES I DD R V L+ + ++ T V Sbjct: 96 GYAPFRVGVASDLGRSDARESWKTDIGRAFGPDDSPRDVLSTLMNAHARSLQETAAVLDL 155 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + + + GIG S ++A+ +L +IG +++A L + + Sbjct: 156 RLMKNLARRIALSEHVDIYGIGGSAVMAKELQNRLYRIGIPCHHCTEVYAGLTSASLQNS 215 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + IS TG E + G +A++ + L + A + T EQ Sbjct: 216 QCIAIGISNTGRTEETIQMLRQAGLAGATTVALSNNPNSTLAESADFQITTSVHEQFLQP 275 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +SA H Q + DLL++ L Q++ A ++ S V Sbjct: 276 DDLSAKHVQLLAMDLLYLLLAQENFPRATSQLAASAMAV 314 >UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=Stenotrophomonas RepID=B4SHK0_STRM5 Length = 282 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 93/279 (33%), Positives = 141/279 (50%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LL+IR ++ ++++AD++L R SSQQLA+ G+SQSSVVKF+QKLG+ Sbjct: 1 MPPLLKIRSERGQMSAIERRIADFILDNAHLLRDYSSQQLASALGISQSSVVKFSQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+P LK ++ + +A P GDD LR +GE L + A T N E Sbjct: 61 KGYPDLKYSIGQDVARAGADPQQAPSEPDSGDDYLR-LGEALRRSKAQAEEETRQANPRE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A ++ + G+G GL A+ FA +L +G D +LA + A+ P Sbjct: 120 EIERIVQLLDGAPKLFVYGLGDDGLYAREFAMRLSLLGLLVVPHTDPILMLANLSAARPG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL S G +L+ + + +GGKV++IT T N L+ A L A ++ A Sbjct: 180 DVLLMFSEFGNLPQLSQLSRQFQDMGGKVISITRHTANPLRAHADAALAVCAHDRTPQVA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLEL------APERIRH 273 + A L D LF+ L + + ERI H Sbjct: 240 QLLYRSAMHALLDFLFVLLCHANPDRQQQLAVNLERIDH 278 >UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU1_PETMO Length = 269 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 117/264 (44%), Gaps = 12/264 (4%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I+ Y L +K+ A Y++ +P H S +L+N AG S++++ + +K+GY G+ Sbjct: 5 KIKGIYNSLTNKEKQAAQYIIERPGDVIHYSITELSNWAGTSETTIYRVLKKVGYSGYQK 64 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL L+ L++ + + + + A+ L +K+ Sbjct: 65 FKLELARELSTPTLDSKES-----------KDLFDMIYNRTVNALTDILRQVDRDKITHA 113 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 ++ ++++++ +G S +A + + K +GF + A D H + DD+++A Sbjct: 114 SEIIMNSKKLLFYAVGRSFPIALDASLKFAALGFASTAYSDPHMQVIVASNLEKDDVVIA 173 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++GV R+ +A G + +T + L + + LYT A E S + Sbjct: 174 ISHSGVIRDTYKSAQVAKEAGAFTIGMTAGVNSPLSKIVNLVLYTSA-EMPQESEFTVSR 232 Query: 246 HAQGMLTDLLFIALIQQDLELAPE 269 + + +LL+ ++ + E Sbjct: 233 IGEMFMVELLYNSVASKMSLKNKE 256 >UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q9_9CLOT Length = 287 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 5/278 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLGYKG 62 L +I + Y L + K+LADY+L P + S L + + S++SVVKF + LG+ G Sbjct: 11 LAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVVKFYRLLGFDG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + K+ L++ L ++ S + I DD + +K+ +++ ++ + E + Sbjct: 71 FKSFKIKLAQELVNRTFYHS---ESDITIDDEPTEIKKKVFLGAMSSLSKNADIAAGECM 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +L SA+RII+ G GAS + Q ++L ++G N +D H A + P D+ Sbjct: 128 D-AQKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHPRPGDV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S +G +L + + + ITG +++ + + L T++EE+ + ++ Sbjct: 187 ILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNILTDAL 246 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +Q L D LF + + R++ + KK Sbjct: 247 NSRVSQFCLIDALFSMISIANANEMLPRLQDTRNTFKK 284 >UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWK5_9FIRM Length = 297 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 118/273 (43%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + +++ A+Y L D + + +A E S +S+ KF +KLG+KG+ Sbjct: 21 ILSKKSTFTKTENFYAEYFLKLDDEILNKTISNVAEETESSTASIFKFIKKLGFKGYKDF 80 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 +L L+ + + + + +D + K++ N +MY C+ Sbjct: 81 QLNLATNINKNSDDSLLTAITSVNENDSPDEIANKIMAFNIQSMYTLKEDIKNIPFESCL 140 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +++ +++I G+G S +A + K ++ + + D H L+ +D + Sbjct: 141 NLIKKSKKIHFFGMGGSATIAYDSYHKFLRTKYMVNYISDSHMQLSACTKMDQNDCIFVF 200 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G E+ + + K++A+TG + + + + + + E + S++A Sbjct: 201 SHSGRTLEVIEVSKVAKKNKAKIIALTGNPKSEMVKISDEAMILPSIESEHGTESLNARI 260 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + D+L I+L+ ++E + ++ +K Sbjct: 261 LYLTVMDILLISLMYDNVEENKKYMKKRLDALK 293 >UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SX74_9RHIZ Length = 314 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 5/262 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ Y L ++++++AD +L A S+ LA AGVS+ +V +F + +G + Sbjct: 27 DIISLVKDSYSELRRAERRVADVVLDDVKYAVDASNAALAQRAGVSEPTVTRFCRAIGCE 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL L+++L + G + E A+ + Sbjct: 87 GLRDFKLKLAQSLVV---GALYLAKSPAPGSGNGMPFWNAVFGEARRALQEAERQLDPVE 143 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ AR++ + G+ G+S +AQ ++L + G A D + + T P Sbjct: 144 LQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRYGITVNAQCDPYLMRMTASTLKPG 203 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG RE+ A + + +T L + L E Sbjct: 204 DLVIAISATGRTREVIEAVELAKHYRANAIGVTA-PDTELARACDVRLAVAVPEYPDTLK 262 Query: 241 SISACHAQGMLTDLLFIALIQQ 262 ++ +A + DLL +A + Sbjct: 263 PTASRYAFLAMIDLLAVASAYK 284 >UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=Ralstonia RepID=B2UK47_RALPJ Length = 280 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 7/224 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RIR L+ +++++AD++L QP T L +A EAGVSQ +V++F + +G G Sbjct: 19 ERIRAARPSLSPAERQVADWVLRQPGTVLSLPVAAIAREAGVSQPTVIRFCRSMGCHGLS 78 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KL L++ A+ + + + G +++++ A+ A + L Sbjct: 79 DFKLRLAQGNAAHDKPRGAAAPSNVPRS------GTRVLQDTIDALAAMRDRFDPLALDA 132 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V ++ +A RI L G G+SG+VA++ K + G A A D + + ++ D+++ Sbjct: 133 AVALVDTAHRIDLYGFGSSGVVARDAQTKFFRYGIPANAYSDPYLVSMSLNVLQAGDVVI 192 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL 228 AIS +G EL A + + +G V+A+T + L A L Sbjct: 193 AISKSGALPELQTAVERVRELGVHVIAVTA-PGSPLAALADVVL 235 >UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus RepID=C2KAY2_9LACO Length = 281 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 136/280 (48%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I Y L ++ K +AD +P + + Q+L S +SVV+F + LG+K Sbjct: 3 NLANKISDVYPNLNKTSKLIADVYFKEPRIFLNKNLQELGTITQTSGASVVRFCRNLGFK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF ++A ++ + P + I +D V KL + + Sbjct: 63 GFKDFQIACAQEM---PNKQDAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKTIDHKS 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V ++RSA++I + G GASGL AQ+ +KL++ G N V+ H L V + +D Sbjct: 120 LDAAVDLMRSAQQIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKED 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+ SY+G+ +E L A + + K++A+T + L+ A + + E+ + Sbjct: 180 ILIVFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYGA 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ A+ + LL+++LI +LE +++ ++ L +L Sbjct: 240 INSLFAEIFASSLLYLSLISPNLEELNMKMKTTQNLTNQL 279 >UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=Lactobacillus rhamnosus RepID=C7TGD6_LACRL Length = 277 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 132/263 (50%), Gaps = 8/263 (3%) Query: 1 MNGLL-RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN RI Q Y L ++ +++ADY + S + L+++ GVS +++ +FA++LG Sbjct: 1 MNTFDSRIAQVYSALGEASRQVADYFRHNYAKVANSSLRNLSDKIGVSTATISRFARQLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + F LKLAL + + + + + +D K + N AA+ TL+ ++ Sbjct: 61 FASFDQLKLALLKEIDNTT-------NGDVETNDNSLASARKTVNANIAALEGTLSFLTQ 113 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +++ V +L A ++ L G+G+S ++A+ +++ A D H L + + Sbjct: 114 DQIDHSVNLLLDANKVALFGLGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLTE 173 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS+TG ++ D + ++A+T + + L +R S ++I+E+ S Sbjct: 174 HDVAIVISHTGNDTDILALVDLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYRS 233 Query: 240 ASISACHAQGMLTDLLFIALIQQ 262 ++ + +Q + D+L+ L+++ Sbjct: 234 DALISMTSQLAIFDVLYTELVRR 256 >UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RM35_9MOLU Length = 284 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 126/269 (46%), Gaps = 2/269 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + ++ L Y+L + ++S+++LA S +S+V+F +KL Y+G+ K+AL+ Sbjct: 3 NNFSSVERILGKYVLENGEKVLNMSTKELAKATFTSPASIVRFCRKLEYEGYNDFKIALA 62 Query: 72 EALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L S+ + + + +G D + V + + ++ T+ E+L V M+ Sbjct: 63 AQLQYSRLSNDDINANYPFKGTDSVYTVASNIANLSKESIDITMKNLDLEELRLVVLMIT 122 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A+ I + G+ +A +F +K+ +IG + + ++ L S+ + L + ISY+G Sbjct: 123 KAKVIDIYGVSGPLRIASDFQYKMFRIGKDVRISQMINEQLFQAAQSTSEHLAILISYSG 182 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHAQG 249 E+ AA + R +AIT F N L + LY + E A+ S+ + Sbjct: 183 ETEEVIEAAKILYRRKIPAIAITSFGENRLVKYTQRVLYLNSSEFIYSKIATFSSTLSLH 242 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALV 278 +L D+++ + ++ E ++ L+ Sbjct: 243 LLLDIIYGCVFSKNYEDNLNYKIETDNLI 271 >UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteraceae RepID=B9NXN7_9RHOB Length = 320 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 13/283 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + LA ++K+ADY+ + ++ LA VS+ +VV+F + LG + Sbjct: 33 DLIPALHNSQTKLAVQEQKVADYVKDHLNEISSMTIGNLAERCSVSKPTVVRFCRSLGCE 92 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV----N 117 GF KL L++ +A + ++ + I + A++ATL+V Sbjct: 93 GFRDFKLRLAQNVAVSAQYLYRNAGDESSDANSA-------IDQVLGALFATLDVMRGQI 145 Query: 118 SEEKLHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 E+L E R+I+ GI G S LVAQ + + ++G + V D + L A Sbjct: 146 DTERLEEARDACLDRRQILFAGIGGGSSLVAQEASNRFFRLGIPSFFVNDSYVLQMRAAA 205 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 +D+L +S +G + AA+ G ++IT L + L T E + Sbjct: 206 LGLEDVLFLVSASGEADAIVSAAEVANGYGATTISITK-PNTRLSDISKIALLTELPEDS 264 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +A + D L + + Q+ + E +R A + Sbjct: 265 DIYKPTASRYAHLAIVDALAMTVAQEMTDETKENLRRIRASLT 307 >UniRef50_B1Y2D5 Glucokinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2D5_LEPCP Length = 616 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 5/269 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R L+ S++ +A LL P S ++A+ GVS +V++F + +G+KG Sbjct: 337 LLDDVRAALPRLSTSERLVAGDLLSAPRAWMSDSIARIADRCGVSTPTVMRFCRTMGFKG 396 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 KL L L+ + H +R DP ++ + +A+ + + Sbjct: 397 LADFKLRLGAGLSGSTKV----AHRPVRAADPTAERMATILNNSISALIELRDRLHPQAF 452 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +L +ARRI + G+GA+ L A+ K ++G A D T PDD+ Sbjct: 453 EQAVKLLANARRIEVYGVGAAALAAEEAQHKFGRLGLQVVARTDSQLQNVTAAFLGPDDV 512 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LL +S +G +N A R G +V+ + + L + + L E + Sbjct: 513 LLVLSNSGAVDPVNEAVMRARRSGTRVIGM-CPQRSDLARLSDVILPVDHPEDLQALVPM 571 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERI 271 + Q ++ D+L L Q + + Sbjct: 572 VSRLMQTVIVDVLVTDLALQRRDHINAAL 600 >UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0W4_ERYRH Length = 285 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + RI+ L+ ++ K+A Y+L P L+ +L+ S S++ +F +K+ Sbjct: 1 MLLINRIKNS-TQLSDTESKIAQYILENPQLVTQLTIHELSEITYASASTITRFCRKMKT 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF K+ L+ L+S + + + + + ++ N +M T N Sbjct: 60 EGFSDFKVKLAGELSSFSITENRIRDDVPFQSNHTSTEIVQSILSLNYQSMSDTYNNIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E+L + A I L G G S ++AQ+F +KL +I + + Sbjct: 120 EQLERIAHKIYYAPHIYLYGSGQSLILAQDFQYKLFRIELDCNLETSLGFQSLKANTQPL 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TN 238 D + L ISY G D ++ + ITG N L AS ++ +E+ T Sbjct: 180 DSIALIISYYGQNEHNKTIVDSLVERNIPYILITGPLNNPLCTHASEVVHVSPQEELVTK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AS S+ + ++ D ++ + D E + I +KK Sbjct: 240 MASFSSRTSMQLVLDFIYALIFAIDYEKNQKIIEKHPWYIKK 281 >UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NFU9_EUBSP Length = 285 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 130/286 (45%), Gaps = 19/286 (6%) Query: 2 NGLLR-----IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 N L R I+++Y + +++K+AD++L P A + +LA ++GVS ++VV+ Sbjct: 8 NILDREVLEVIKEQYDYIFSAERKVADFVLQNPQKAVDSNVSELAKQSGVSDATVVRMCH 67 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 +GY G+ +++L+ L + S + R EKL +E M A + Sbjct: 68 HIGYTGYYQFRISLARDLGKKQYGSSALAES--------RDAVEKLFQEYAQTMLAIGSR 119 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 + + CV +L++ + + +G + +AQ ++L ++G + + V Sbjct: 120 IDADVMWNCVNLLKTCKEAHIMAVGNTCPLAQYMGFRLGRLGIKSTYNVAAEYFMNHVNL 179 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + DDLL+AIS +G R++ + G K +AIT F + + A + L + +E+ Sbjct: 180 ADQDDLLIAISQSGTSRQVIQGLELGKEKGLKSIAITAFAQSPVSNLADYVLLSAGKEEP 239 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + A + + D L + E I+ ++A +++ Sbjct: 240 FSFYKGYAHMNETAVIDALL------NFVTNEELIKTTQADKPEMI 279 >UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R5_9FIRM Length = 314 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 118/282 (41%), Gaps = 5/282 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ Y + ++ +K+ADYL+ D + +LA +GVS +SV +F + +GYK Sbjct: 27 SVIPEIKSLYPQMNEAMQKIADYLIDTEDKKCVERASELARRSGVSTASVSRFVKMMGYK 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRG-DDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +L + + ++ + + + ++ + T + + Sbjct: 87 EFRDFRLKIVMEKQEENRQEENELNYNGEPITGDAHSICKTIFSKSVRELEETWGILDFD 146 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ ARRI++ G+G S + + +L +IG+ D H ++ Sbjct: 147 TMQTVADLIHEARRIVVIGVGRSKVTMEALYSRLYRIGYPIMMFSDAHEIVNITSIMEKK 206 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +S G + + A + G +V+ I+ + L + + + L++ + Sbjct: 207 DILICVSNFGQSKSVVEGARRAKKRGIQVVGISSIKESPLAKISDYTLFSAYDYNNAQDG 266 Query: 241 SI----SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ S AQ ++ D L++ + ++ + + Sbjct: 267 NLFDPSSENLAQLVIVDCLYMLVAHKNKRKNITYFKTFSNEI 308 >UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=Q71W74_LISMF Length = 283 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L++IR+ L S+K+LA+Y+L P ++LA A VS +++ + KLG Sbjct: 1 MNILIKIRE-LTNLTNSEKELANYILANPKKTLQCKPKELATAAFVSAATIYRLINKLGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK+ ++ +L E + I D + L + + TLN E Sbjct: 60 NGIGELKIEIASSLRETNEEKDLNYDYPILESDTPYQIMTNLNQIYKGTIDETLNNADPE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L A+ I + A+ AQNF +++ +IG + + + S + Sbjct: 120 ELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAANSDEN 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS- 239 + + +SY G R L + ++ IT N L + A+H +Y + E N Sbjct: 180 HIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENHYNKV 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKKL 281 +S S + + D L+ Q+ E + + + + + +L Sbjct: 240 SSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQKMNTEL 282 >UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVK6_9LACO Length = 280 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 135/278 (48%), Gaps = 13/278 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +++ + L + +KK+A L +P+ R ++ +LAN+AGV ++V +F +++G K F Sbjct: 1 MEQVQNLFINLPRQEKKVARVTLQKPELVRRMNITELANQAGVGVATVSRFTKRVGCKNF 60 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 KLAL P++ + + + +K+ + T+ + S ++L Sbjct: 61 ADFKLAL-----VTPDTMQRESEQNVSTPNDIHNYYQKI-------LAETMAMVSTKQLR 108 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + ++ A+R+ + GIG+SG AQ FA +LM++G A A+ + + + +D++ Sbjct: 109 QAANLIHGAKRVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESNMMTIASATMQDNDIV 168 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A+S +G E+ A + + G ++A+T F + L + + + E + I+ Sbjct: 169 IALSVSGSTPEVCSAVRDSRKNGATIIAVTAFKNSLLGKMSDLLFQIKSTELVGDYDFIN 228 Query: 244 ACHAQGMLTDLLFIALIQ-QDLELAPERIRHSEALVKK 280 + A + D+L L+Q D + + + K+ Sbjct: 229 SQFAVTYVIDMLTQMLLQFTDFRATMNKTVEAILVTKE 266 >UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A459_ENTGA Length = 268 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 128/266 (48%), Gaps = 8/266 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I L+ +D KLADY++ D ++S LA + S ++V++F++KLG+ Sbjct: 1 MSVVTTIESIKNELSTTDLKLADYIVENLDEIPTMTSNVLAVHSNTSPAAVIRFSKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KLAL++ + ++ + ++ I+ DD + K+++ N + AT + E+ Sbjct: 61 SKFSDFKLALTKDIENRIYNE----YSDIQNDDSFQTAKNKILRNNKMIIDATDPILDEQ 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V + A+RI + G+G S L A++ K +IG +D + L ++ D Sbjct: 117 TVQQVVDKMFHAKRIYVYGVGTSVLAAEDIRQKWTRIGKTVIFDKDRYLLTQQMKNDGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-- 238 L IS++G R++ + +G L ++ N L ++ ++T E N Sbjct: 177 SLFWGISHSGKNRDVLSLVEIAKSLGMPTLGMSQLGQNQLTKKVDTPIHTARTEDIKNGH 236 Query: 239 --SASISACHAQGMLTDLLFIALIQQ 262 S + + Q + DLLF +++ Sbjct: 237 YGSGATHSIILQIVTIDLLFYFYMRR 262 >UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB00_9FIRM Length = 291 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 118/281 (41%), Gaps = 4/281 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RI ++ + +K +ADYLL +++S LA S S++ +F KLG G Sbjct: 2 IIERIIKQ-EEFTDVEKSIADYLLKNGYEVKNMSISSLAQVTYSSTSTITRFCHKLGLDG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ + + + V ++ G+D + ++L + N + T++ + +L Sbjct: 61 YKKFQILFNSEYEAYEKKGLVNVNYPFTGEDSYEQIAKQLERLNQETIAKTISCFNYNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V + A I + +G S VA F K+++ G + L A + + + Sbjct: 121 NRIVRRMDKADMINIFSVGTSVTVAMEFQQKMLRFGKIVNLTQQACFLPGYALAGTENTV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-- 240 L IS +G R++ + + + G + +T + + + + EE + A Sbjct: 181 NLVISLSGENRDVVESLNLLKEQGRYTVGMTSTPNSTVARECKEVILVDIEENNSYEAKI 240 Query: 241 -SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + D LF L + + + + + ++++ Sbjct: 241 DTFAIYSAFHFVLDCLFSFLYKYNFDSNTKITKEKAYMIER 281 >UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, RpiR family n=15 Tax=Firmicutes RepID=Q71VW8_LISMF Length = 268 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 125/275 (45%), Gaps = 14/275 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I+Q Y L +K++A Y+L + D ++++ ++LA E G S S++ +F + + Sbjct: 1 MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEETGTSISTITRFCRHVRC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ ++ A P + E++ + T+ + Sbjct: 61 DSFVDLKMRVNTAATMVPSLG-------------YDDLFEEVYSFYHKVIDNTVKLIEPA 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E V ++ A+R+ + G+G+SGL A + +L+++G N +V D H ++ T ++ + Sbjct: 108 KIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITTKE 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ IS +G EL A + KV T F + + + + + + Sbjct: 168 DFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPVYNTLFVSKRY 227 Query: 241 SISACHAQGMLTDLLFIALIQQD-LELAPERIRHS 274 ++ + + D++ + L+Q + E+ ++ Sbjct: 228 FANSQFSIMYVMDIISMMLLQNESYRDNMEKTINT 262 >UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax=Staphylococcus RepID=A5IV96_STAA9 Length = 290 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 129/278 (46%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I +Y + +++KK+A ++L P + SQ LA+ +S SSV++F++K+ Sbjct: 3 NVLTEIDSQYPYMTKNEKKIAKFILNSPQKVIKMRSQDLASLLDISTSSVIRFSKKITDG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +S+ + S + ++ ++ + KL T A+ N +++ Sbjct: 63 GFHDLKINISKYV----PKASSIYNVELMNNESTESLRTKLHTRTTRALNHANNELNDKT 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L+ + I + G GAS +VA + KL +IG N V++ H + + +D Sbjct: 119 IDQICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSND 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSA 240 ++ I+ G + E+ + ++ IT N + Q ++ L Y +E + Sbjct: 179 SVILITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMHMG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + ++ AQ D+L+ + + + + I S+ + Sbjct: 239 ATTSLFAQMFTIDILYYRYVALNYHASLDFITQSKMAL 276 >UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XD02_9LACO Length = 294 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 3/271 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++R++ + ++ ++K +A+YLL + + + +A + S S++++ KLG+ Sbjct: 1 MLIKDQLREK-KNMSNNEKIVANYLLKADENIEKDTVRTVAEKTYTSPSTIIRLCHKLGF 59 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K L+E + +V ++ R +D R V K+ + T V Sbjct: 60 TGFSDFKNKFLNEVKYFNLQFQNVDVNFPFRREDTAREVMSKITDLYIETIKDTEKVVDM 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L C + + I + G A +F K+MKIG +++ L + Sbjct: 120 RTLLRCRKICSESEEIHIFSYGTYLNQAYSFKEKMMKIGKKVMISSNLNYQLYEAEIMQA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D+ + ISY+G L A + + +AIT N L + LY +E N Sbjct: 180 GDIAIIISYSGETNNSLLIAKQCRKNNIPTIAITSIGENDLTKICDETLYISTKESLYKN 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPE 269 S + + D+L+ + Q D E E Sbjct: 240 IGDYSIHLSVSYVLDVLYSLIFQNDFEHFYE 270 >UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8A7_MACCJ Length = 285 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 130/282 (46%), Gaps = 6/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I + Y +K++AD ++ P+ +L +++A+ + S++++V+F+++LG Sbjct: 3 SVLGQITKMYDSFTPVEKRIADVVIEYPEKVVNLPIKEIAHLSNTSEAAIVRFSKRLGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G +K+ L+ L + + + +I D ++ EK+ A+Y T V S + Sbjct: 63 GIKVVKVELARELHTIADKK---VPTKIELTDDEEVMKEKVFNNTIQALYNTEKVISAKV 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E + SA+R+++ G+G S +VA + KLM I +A D+ + + + D Sbjct: 120 IDEAAQAITSAKRVMIFGVGNSRVVATDLHVKLMNIDQSAILATDLLSAITLLGHYEAGD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L S T + + G K++ +T + + A L EE N Sbjct: 180 VLFVTSETSKNKVITDICKYAKEKGIKIILLTQKFSSPAIRMADIVLAMAKEENEINLGY 239 Query: 242 ISACHAQGMLTDLLFI---ALIQQDLELAPERIRHSEALVKK 280 ++ AQ + D+L++ A ++ + + + + + + Sbjct: 240 MTVRTAQLTIVDVLYLRVCAYLKDTVLSNMQNLNETRKITHE 281 >UniRef50_Q38V38 Putative transcriptional regulator with a sugarisomerase domain, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38V38_LACSS Length = 276 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 130/278 (46%), Gaps = 9/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+Q+Y L+ ++K+A ++ + + + + +LA E VS S++ +F +K+G Sbjct: 1 MAIIEHIKQQYSFLSPQEQKVALAVIQKGASIQRIGIDELAAELQVSNSTISRFVRKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F KL SE P+ + Q+ + + ++ + + T + Sbjct: 61 QNFVDFKLQFSE----GPQPTMTGVQGQVDHESQTSV---EIYQFYQDVITKTQARIKQA 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V+ +++++++ + G+G+SG F +L ++G A V + H +L T + + Sbjct: 114 DLDQLVSWIKTSQQLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRIINKT 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G E+N A G K AIT T + L + L+ ++ Sbjct: 174 DLVIGLSNSGNTEEVNQAVQNARENGAKTAAITSGTDSPLAAASDLTLFVEDSIGFASAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ A + D+L + L++ E R++ + + Sbjct: 234 FVNSQFALTYVIDILAMLLLED--EQYNWRMKQTVDTI 269 >UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=Lactobacillus crispatus RepID=C2KD15_9LACO Length = 279 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 124/264 (46%), Gaps = 7/264 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ R L Q ++K+A ++L P + + QLA+ VS +++ +FA+++ Sbjct: 1 MTFLTDLQNRLPDLPQQERKIALFILQDPQFIQSANINQLASTIKVSNATITRFARRVNC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ L+ A AS N I D + ++ + T N + Sbjct: 61 SSFTDLKVKLAAAAASSQV-------NTITNQDNSKTTAHQVYDFYNRVLSETQNKLDIK 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +++SA+R+ GIG+SG + +L+++G +A A + + + T S D Sbjct: 114 QLKKIIQLIKSAKRVYFYGIGSSGYTSLEATQRLLRMGISAFAETESNNMFMTSSIISKD 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG L A + + V+A+T + + L Q A + ++ Sbjct: 174 DLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLADIVVGVQDTNYINDAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDL 264 I++ + + D++ L++ + Sbjct: 234 FINSQFSIMYVIDVITTLLLKNNK 257 >UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6N7_9ACTN Length = 301 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 124/272 (45%), Gaps = 6/272 (2%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 +QG ++S++++ DY+L A L++ QL+ A S+++V +F +KLG+ F + + Sbjct: 29 STHQGYSESEQRIVDYILEHQSEAPRLTAAQLSRAAATSEATVSRFCRKLGFGSFRSFQF 88 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 +L+ L SQ D + + ++ + + AT++ + L V Sbjct: 89 SLARDLESQRNEGLT----DEVSLDNMEQSLKNILAAKVSELNATIDGIDHDTLAAVVHA 144 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 L+ A I +G + VA + +K ++G A + P D+++ IS Sbjct: 145 LKHAGVIEFAAVGNTNAVALDATFKFSQLGLRCMASTISETSIGFALTLRPGDVIVLISN 204 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS-ACHA 247 +G R LN A G V+ I+ + + L + A + T+ E + + + + Sbjct: 205 SGKSRRLNRMAKAARNCGATVVVISSDSKSPLARLADYTFNTVNHEALLTTGDFAFSKIS 264 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 M+ ++++ L+ + ++ A E I + E L++ Sbjct: 265 ATMIIEVIYNFLLPE-IKDAREHISYYEELIQ 295 >UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A71F3 Length = 300 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 6/273 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I R LA + + +A L +P+ A ++A AGVS+ +VV+F + LG+ G Sbjct: 16 IHARLPDLAAAQRLVAKVFLDKPEWAMQAHVNEIAVFAGVSEPTVVRFCRALGFHGLRDF 75 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 KL +++ +A SV +H + D + + K+++ + + E++ + Sbjct: 76 KLRVAQQVA----LGSVALHRNVTAVDSIDEIVGKVLRSSADILLDIERQLPREQIKRAI 131 Query: 127 TMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + L SA R+ G+G SG VA + +L + G A D + + + SP D ++A Sbjct: 132 SALGSAHRVDCYGVGTTSGFVAADAQARLFRFGIQAQTYTDANMQMFSAATLSPGDGVIA 191 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 +S+ G L A G V+ I L L AC Sbjct: 192 VSHFGRMPFLLEAVRVARERGAVVIGI-CEPGTPLAGECDIPLTFALPASVNAYIGSDAC 250 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + D+L + + + E++R + ++ Sbjct: 251 IAHLAIIDILIVGVAFERGAAGIEQLRRLQNVL 283 >UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B715 Length = 282 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 125/277 (45%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I Y S+KK+A Y++ +++ L+ +G S++SV +F +++G K Sbjct: 4 NVIDEIYSSYDHFFDSEKKIAKYIMHHTSEVVNMTVGDLSQASGASEASVSRFCKRIGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK++L++ L P S + I N+I D + + ++ + T+ + K Sbjct: 64 GFHHLKISLAQELVEIP-SCNTTISNRISITD-VNNSLDSILANKVEELTQTITMMKSNK 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E + + +R I +G + VA + +K +IG ++ + L + S +D Sbjct: 122 LDEILDCILKSRHIYFVAVGNTVPVALDGCFKFNQIGIPSSTSSILETELGMILNVSKED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + A E L+IT +++ + + + T E+ Sbjct: 182 MVIAISNSGESSGVLTAIKEAHNQKATTLSITNSDKSSIALESDYHITTATREKVYLEGY 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + ++L++ L E A E+ E L+ Sbjct: 242 CFSRVSATAVIEILYLFLT-TMKEDAHEKSAQHEDLI 277 >UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU45_9FIRM Length = 277 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 127/276 (46%), Gaps = 17/276 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L RI + L+ ++ LA Y++ + +++ ++A E GVS +++ +F +K+G Sbjct: 1 MGVLERIEANFVHLSPKEQLLATYIMQESPYFTNITISEMAKETGVSAATITRFCRKVGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F LK+ L + E S H D + ++ + T + SE Sbjct: 61 ESFVDLKIQLQAS-----EGESASNHQNHDMFDTVSEFYNRI-------IQRTSELQSEY 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +L A RI++ G+G+SGL A+ A +L ++G A + D H ++ + + Sbjct: 109 QLRQLIQVLSQANRIMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVTRSS 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +++ A + G ++AIT ++L + A L + Sbjct: 169 DVVIAISNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKLADETLLVHNSRFVNSEF 228 Query: 241 SISACHAQGMLTDLLFIA-----LIQQDLELAPERI 271 ++ L D + + + Q+++ + I Sbjct: 229 FVNTQLPIFFLIDAITLMMLENPVFSQNMQKTIQEI 264 >UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteobacteria RepID=B7LQI9_ESCF3 Length = 301 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 11/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I +R+ L ++K++A ++L A L +LA SQ+SV +FA+ LG K Sbjct: 20 DIISCITERFMALTATEKRIAQFILDDVPAAVELPIAELARLTQTSQASVTRFARALGCK 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK+ L+++LA I + D P + + + + + Sbjct: 80 DVRELKVKLAQSLA---------IGQRFILDVPDLDGVQGIYESIISVLETHRRSLDMNA 130 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V+ L AR+I+ G G S + +Q ++L ++G + D + A P Sbjct: 131 ISQAVSWLSQARQILALGTGGGSTICSQEIQYRLFRLGLPVVSQNDALMMRMMCSAVMPQ 190 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ +S G E+ +A + G +V+AIT L ++ L + +E Sbjct: 191 DVVIVLSLGGYTPEIIESAAIARQYGARVIAIT-PAQTPLAEQVDLVLPLLVQESDYIFK 249 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + +A + D+L L + A +R+R + ++ Sbjct: 250 PTPSRYAMLAMVDVLATELAMANKAQAKDRLRRIKLVL 287 >UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAC9_9ACTN Length = 270 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 17/284 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDT-ARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + +I +++ +A ++L + L+ E GV ++++V+F +KLG Sbjct: 1 MSIIGKIESCLPSFTKTETIIARFILDHREDGVEQYLLGDLSRELGVGEATIVRFCRKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK LS + + +++ T ++ S Sbjct: 61 LGGFTELKFLLSVENEEHTAARENSGE---------------IKDILISSIKMTDSMVSS 105 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + V + +A + GIG SGL A +L + G A+ + HA Sbjct: 106 KDISDVVDLAGAASEVFFFGIGMSGLSASMGESRLFRFGKRTKAITEAHAQNMQASLCDE 165 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L++A+S +G +L A G KV+AIT + + L + A + L + + N+ Sbjct: 166 NSLIVAVSISGETIDLIEAVSLAKESGAKVVAITSYLRSTLAELADYVLLSFGKPNYINA 225 Query: 240 ASISACHAQGMLTDLLFIALIQQ-DLELAPERIRHSEALVKKLV 282 + S +Q + DL+ + E A + R + +++ K+V Sbjct: 226 GAFSTVVSQLYILDLITSEYALRFSAEAARSKKRIARSIINKMV 269 >UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 RepID=C3RI81_9MOLU Length = 296 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 120/280 (42%), Gaps = 4/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ + ++ ++ +A ++L S++ +A S ++V++ +KL + Sbjct: 1 MLIIEKLN-LKEKMSDGEESIAAFILTLGKELHKYSTRNIAEATLTSPATVIRLCKKLDF 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF K + + + V + +D + K+ + T+ + Sbjct: 60 KGFDDFKEQFLKEINYLDQQYGKVDANFPFNRNDTMMKTAHKISHLYEDTVTDTMTLLHH 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L+++ I + G + +A++F K++KIG N +++ L V Sbjct: 120 DDLQKALRLLKNSNSIHIFSTGTALNLAESFKEKMLKIGKNVVISNNLNYQLYEVSCIPK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + ISY+G A ++AIT F N L + AS L +E ++ Sbjct: 180 GDIAIIISYSGETINTIKIAQTCKNNKIPIIAITSFGENTLAKLASCKLTISTKESLYHN 239 Query: 240 -ASISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEAL 277 S A ++ D+L+ +D + + +I+ ++ L Sbjct: 240 LGDFSTHLATHLMLDILYSVFFLEDYDQNYDNKIKITKDL 279 >UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK66_PROMI Length = 283 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 133/282 (47%), Gaps = 8/282 (2%) Query: 1 MNGLLRIRQRYQGLA----QSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 M+ L + + + L ++++LA YLL D +++ +LA +AGVS +SV++F++ Sbjct: 1 MSTLTK---KLENLRLQGKGTEQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSR 57 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 ++GY G+P K+ Q +S S ++ + D + K T A+ ++ + Sbjct: 58 QMGYGGYPEFKIDYLSE-EKQQKSSSDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIAL 116 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 + + SA+RI+L G+GAS +VA + KL+++ N D+HA LA Sbjct: 117 LDAATIDLLAEKMISAKRIVLFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSAN 176 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 S DDL +A++ G ++N + G +A+T F + + A++ L +EQ Sbjct: 177 LSADDLAIAVTARGNTADINRMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQH 236 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + I+ Q + D+LF + A + + V Sbjct: 237 SQLGVITPQVLQMVAFDVLFFKYMTLAKGSAEKALLKGRQAV 278 >UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU4_9MOLU Length = 285 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 130/281 (46%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + +G + +K +A+Y++ + ++ +LA S +++ +F +KLG Sbjct: 1 MSLLSKL-EYKKGFSDIEKGIANYIIDHKEEVANMRLVELAEATFTSTATISRFCKKLGE 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K + + K+ + ++ + ++ V + + +D ++ V +L + + AT + + Sbjct: 60 KNYNSFKINFASSVLTSYQT-DVDYNRPFKENDSIQEVTNQLGELYKDTIEATKALLDYD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L I + +GAS L F +++ I + + + Sbjct: 119 VLNQVIEKLLKTSVIDIFAVGASYLSGLLFEHRMISIDHFVNFKSSPNDQDKRSLFVNKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNS 239 + + ISY+G E+ D ++ G ++AIT + L++RA++CL ++E + Sbjct: 179 TVAIVISYSGESHEIKTIVDRIVDNKGTIIAITSINDSYLRKRANYCLTMCSKENIVSKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + S+ + L DL+F L Q+D R + E +K Sbjct: 239 ETYSSKLSSDYLMDLIFSILFQKDYYPNLIRKINCEQKYEK 279 >UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8QBF9_9ENTR Length = 297 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 118/274 (43%), Gaps = 5/274 (1%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 R L + ++ +A ++ P+T +S +A+ VS +S+ K A+KLG+ GF LK Sbjct: 19 RTLAPELGRKERSIARFIDDNPETLASMSITDIADYLDVSVASITKVAKKLGFTGFHDLK 78 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 + + + + E VP + G+ + E + + A+ L + Sbjct: 79 MNIGKHITVSEELIDVPPVS--GGEFYTEKIVESTLYNSILALQDALKAIDIAVVKSVAA 136 Query: 128 M-LRSAR--RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + + + RI++ G G SG + ++F KL+KIG ++ D H L T P D+LL Sbjct: 137 LFIHRSENARIVIAGCGGSGSICEDFNHKLLKIGIFSSVFSDSHKQLMTASLMRPGDILL 196 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 +S++G ++ G + + +T + + L + H + + + + + Sbjct: 197 TVSHSGQTTDIINMTKMANDKGAETICLTNYPNSPLSHISRHAIISSVKNNPITGENATT 256 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + D +F + + E + E + ++ V Sbjct: 257 RIVHLNILDAIFTIIASKTSEFSQESLHNTRNAV 290 >UniRef50_Q041H9 Transcriptional regulator n=22 Tax=Lactobacillus RepID=Q041H9_LACGA Length = 279 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 125/278 (44%), Gaps = 7/278 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + +I + ++ SD+K+ +L P +++ QLA A VS +S+ +F + L Sbjct: 3 NIIDKIYAQMSSMSTSDQKVGRTILKNPAVVINITISQLAKRANVSDASITRFCRNLSLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L++ + + + D ++ ++ K ++ATL+ EK Sbjct: 63 GFHELKILLAQCIGQKESESLKKL-----PKDDMQAALGEIEKNKVGEIHATLSQIPTEK 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 L + ++++ ++R I ++ G + VA + +K +IG + A ++ A Sbjct: 118 LEKILSIIEASRVIQISAEGDTYPVAADAVYKFNQIGLLSFASGGNVETADAQTMNLGRK 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L+ IS +G L + KV++IT + + + + L T + + Sbjct: 178 DCLIVISNSGESAALLKEIKLAHKNKLKVISITNNPASPIALASDYHLKTGVRQTILQNQ 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A + + LF+ LI+++ E E I+ E +V Sbjct: 238 YYFSRVAAFTIIEALFLLLIKRN-EKRIENIKQHEKIV 274 >UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PSH8_9ACTO Length = 309 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 12/274 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L R+R GL+ + ++A LL +P A L+ +LA G S +V +F + L Sbjct: 5 GFLTRLRAEQPGLSGALGRIAAALLAEPGEAARLTITELAERTGTSPGTVTRFCRTLRLA 64 Query: 62 GFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL+E + P S I I D L V + ++ NT A+ T + Sbjct: 65 GFAELKVALAEEVGRAAPSRWSTDIGRSIEPADELDQVLKVIVGANTQALLDTADQLDLG 124 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E + AR I L G+G SG+ A +L +IGF ++H+ L +V + Sbjct: 125 AVDEAARAISDARAIHLFGVGTSGITADELRIRLHRIGFACWVWPELHSALVSVALADRR 184 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT--- 237 D+++ IS++G E G + +AIT +AL A L T A Sbjct: 185 DVVIGISHSGQIAETIAVLRAAAARGARTIAITNDATSALAGEAGLVLATAQNGSALTTV 244 Query: 238 --------NSASISACHAQGMLTDLLFIALIQQD 263 + +++ H+Q ++ D+L+ + Q + Sbjct: 245 PPGGAGSSQADALADRHSQFLVLDVLYTRVAQLN 278 >UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019054B9 Length = 259 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 10/267 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + ++ +K+A ++L P T + S +LA EA S++SV++F ++LGY+GF KLAL+ Sbjct: 1 MTRALEKVAAFVLADPQTVLYKSITELAEEAESSEASVIRFCRELGYQGFQNFKLALAHE 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 LA+ + + + ++L++ A+ T + + + ++L AR Sbjct: 61 LATLQQPTA----------SAPGDMVQELVETARTALEETERLLDRDAIQRVSSLLLDAR 110 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 I + G+ AS + AQ +KL ++G A RD H +S DDL + IS +G Sbjct: 111 HIEIFGVAASAITAQYLEYKLARLGIQAHIPRDSHLATMASATASADDLYILISSSGSTI 170 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + A+ G KV+AIT T + L L + E + + +Q ++ D Sbjct: 171 DTLRVAESAHARGAKVIAITNRTKSPLAAICDFKLLASSPETPLTGGAFPSKISQLLIVD 230 Query: 254 LLFIALIQQDLELAPERIRHSEALVKK 280 L + + D +E++ + Sbjct: 231 ALANTITKLDPARLKTIKETAESVSDR 257 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=A... 311 1e-83 UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 310 4e-83 UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=A... 308 2e-82 UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=... 304 2e-81 UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Ac... 304 3e-81 UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales Re... 301 3e-80 UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulat... 296 4e-79 UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=T... 296 5e-79 UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=D... 293 4e-78 UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax... 293 5e-78 UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=T... 292 1e-77 UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=B... 290 3e-77 UniRef50_D2AR91 Putative transcriptional regulator, RpiR family ... 290 4e-77 UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteri... 289 5e-77 UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulat... 289 6e-77 UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Ba... 289 8e-77 UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n... 287 3e-76 UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus ... 286 4e-76 UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=P... 286 6e-76 UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus ... 286 7e-76 UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=... 284 3e-75 UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=C... 283 7e-75 UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=K... 282 1e-74 UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopo... 281 1e-74 UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=A... 281 2e-74 UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. ... 281 2e-74 UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATC... 281 2e-74 UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=H... 281 2e-74 UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus ... 281 3e-74 UniRef50_P44540 Uncharacterized HTH-type transcriptional regulat... 280 3e-74 UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia... 280 3e-74 UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=B... 279 9e-74 UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=C... 279 1e-73 UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttle... 279 1e-73 UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putativ... 278 1e-73 UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostri... 278 2e-73 UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Sta... 278 2e-73 UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Se... 277 3e-73 UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=G... 277 4e-73 UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=B... 276 4e-73 UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostri... 276 8e-73 UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=B... 275 1e-72 UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=B... 275 1e-72 UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=... 274 2e-72 UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Cl... 274 3e-72 UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=... 273 3e-72 UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=E... 273 4e-72 UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n... 273 4e-72 UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonel... 273 6e-72 UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteri... 273 6e-72 UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostri... 272 8e-72 UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulat... 272 8e-72 UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=B... 272 1e-71 UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=A... 271 1e-71 UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=C... 271 3e-71 UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=G... 271 3e-71 UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium ... 270 3e-71 UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=F... 270 4e-71 UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator... 270 4e-71 UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=C... 270 4e-71 UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=S... 269 5e-71 UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostri... 269 6e-71 UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n... 269 7e-71 UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=P... 269 8e-71 UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostri... 268 2e-70 UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collins... 267 3e-70 UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=S... 266 4e-70 UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n... 266 6e-70 UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU 266 6e-70 UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Er... 266 6e-70 UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Ta... 265 1e-69 UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=P... 263 4e-69 UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Provide... 263 4e-69 UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseria... 263 4e-69 UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator ... 263 5e-69 UniRef50_Q184N2 Putative phosphosugar-binding transcriptional re... 263 8e-69 UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=... 262 8e-69 UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=T... 262 1e-68 UniRef50_P37767 Uncharacterized HTH-type transcriptional regulat... 262 1e-68 UniRef50_B9K581 Transcriptional repressor of rpiB expression; tr... 262 1e-68 UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=B... 261 1e-68 UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collins... 261 2e-68 UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=P... 261 2e-68 UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=... 261 3e-68 UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax... 260 3e-68 UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oen... 260 4e-68 UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU 260 4e-68 UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=At... 260 5e-68 UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=... 259 5e-68 UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp... 259 6e-68 UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment)... 259 9e-68 UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Ga... 259 9e-68 UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus ... 258 1e-67 UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_... 258 1e-67 UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus si... 258 2e-67 UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=P... 257 3e-67 UniRef50_P26833 Uncharacterized HTH-type transcriptional regulat... 257 4e-67 UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus la... 256 5e-67 UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=K... 256 6e-67 UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostri... 256 8e-67 UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR... 255 1e-66 UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulat... 254 2e-66 UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=... 254 2e-66 UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteur... 254 2e-66 UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=L... 254 2e-66 UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rh... 254 2e-66 UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor... 254 2e-66 UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=B... 254 3e-66 UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=B... 254 4e-66 UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecali... 253 4e-66 UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax... 253 4e-66 UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=A... 253 5e-66 UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales ... 253 5e-66 UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=B... 253 5e-66 UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=G... 252 7e-66 UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=At... 252 1e-65 UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulat... 252 1e-65 UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostri... 252 1e-65 UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteoba... 251 2e-65 UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=K... 251 2e-65 UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=A... 251 2e-65 UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulat... 251 3e-65 UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus ... 250 3e-65 UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=P... 250 4e-65 UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=S... 250 4e-65 UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n... 250 4e-65 UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=B... 249 1e-64 UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocace... 248 2e-64 UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=P... 247 2e-64 UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostri... 247 2e-64 UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=A... 247 3e-64 UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales ... 247 3e-64 UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hy... 247 3e-64 UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enteroba... 247 4e-64 UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus ... 246 6e-64 UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=F... 246 7e-64 UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID... 246 9e-64 UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=St... 245 1e-63 UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, ... 245 1e-63 UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n... 245 1e-63 UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=O... 245 1e-63 UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteri... 245 2e-63 UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=B... 245 2e-63 UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacte... 244 2e-63 UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, ... 244 2e-63 UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=L... 244 2e-63 UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n... 244 2e-63 UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium bu... 244 3e-63 UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=A... 244 4e-63 UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=L... 243 5e-63 UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejue... 243 6e-63 UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enteroco... 243 6e-63 UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n... 242 8e-63 UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=A... 242 8e-63 UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=B... 242 9e-63 UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 T... 242 9e-63 UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=P... 242 1e-62 UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus ... 242 1e-62 UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio ... 242 1e-62 UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=... 242 1e-62 UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostri... 241 1e-62 UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus... 241 1e-62 UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=S... 241 2e-62 UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostri... 241 2e-62 UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillac... 241 3e-62 UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus ... 240 3e-62 UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=... 240 4e-62 UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=M... 240 4e-62 UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus pl... 239 6e-62 UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=L... 239 9e-62 UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales ... 239 1e-61 UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostri... 239 1e-61 UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulat... 239 1e-61 UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n... 238 1e-61 UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=F... 238 2e-61 UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus ... 237 3e-61 UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=F... 237 3e-61 UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=P... 237 4e-61 UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1... 237 4e-61 UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillale... 237 4e-61 UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1... 236 5e-61 UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=F... 236 6e-61 UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=D... 236 1e-60 UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escheri... 235 1e-60 UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteracea... 235 2e-60 UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmone... 234 2e-60 UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family... 234 3e-60 UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdema... 234 4e-60 UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=E... 233 5e-60 UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp... 233 5e-60 UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Ba... 233 6e-60 UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID... 232 7e-60 UniRef50_P46117 Uncharacterized HTH-type transcriptional regulat... 232 7e-60 UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=R... 232 9e-60 UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=S... 232 1e-59 UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=A... 231 2e-59 UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=S... 231 2e-59 UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=La... 231 3e-59 UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax... 230 4e-59 UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacte... 230 4e-59 UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=F... 230 5e-59 UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family pr... 229 6e-59 UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 ... 229 7e-59 UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID... 229 7e-59 UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=E... 229 9e-59 UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional... 228 2e-58 UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=C... 228 2e-58 UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonel... 228 2e-58 UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=L... 227 2e-58 UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=La... 227 2e-58 UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacte... 227 2e-58 UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collins... 227 2e-58 UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, ... 227 2e-58 UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional... 227 4e-58 UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pe... 227 4e-58 UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, ... 226 5e-58 UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillal... 226 7e-58 UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=P... 226 7e-58 UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=A... 226 8e-58 UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus pl... 226 9e-58 UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=C... 226 9e-58 UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillu... 225 1e-57 UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acid... 225 2e-57 UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=E... 224 2e-57 UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family ... 224 2e-57 UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=R... 224 3e-57 UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteoba... 224 3e-57 UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=E... 224 3e-57 UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacte... 224 3e-57 UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=G... 224 4e-57 UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=... 223 4e-57 UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostri... 223 5e-57 UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=P... 223 6e-57 UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus ... 223 6e-57 UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=La... 222 8e-57 UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium ... 222 9e-57 UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax... 222 9e-57 UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostri... 222 1e-56 UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator... 222 1e-56 UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Li... 222 1e-56 UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=D... 222 1e-56 UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, ... 221 2e-56 UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n... 221 2e-56 UniRef50_Q38V38 Putative transcriptional regulator with a sugari... 221 2e-56 UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=... 221 3e-56 UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=M... 221 3e-56 UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=T... 220 3e-56 UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdema... 220 4e-56 UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID... 220 4e-56 UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus cas... 220 4e-56 Sequences not found previously or not previously below threshold: >UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7MQM6_SACVD Length = 333 Score = 311 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 77/278 (27%), Positives = 132/278 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A +L P + S ++A A S+++V +F + +G Sbjct: 38 SPLVRIRSLLPGLARAEQRVAKVVLEDPSSVARRSITEVAMAAKTSETTVTRFCKAIGVG 97 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A S + I DD L V K+ + A+ T + Sbjct: 98 GYPQLRIALAADTARTEAKSSRDLGGDITADDDLASVVSKVSFADARAVEETAEQLDIAE 157 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +L A R+ + G+GAS VA + KL +IG + A D H +L + S D Sbjct: 158 LTRVTELLAEATRVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEGD 217 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G + A G +AIT F + + A H L T A E S + Sbjct: 218 VAVAISHSGATTDTVEALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRSGA 277 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D LFI + Q+ ++ + + + V Sbjct: 278 TASRIAQLTVIDCLFIGVAQRRMDESMAALEATREAVN 315 >UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes RepID=Q8R7I8_THETN Length = 285 Score = 310 bits (795), Expect = 4e-83, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 148/277 (53%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ Y L ++KK+ADY+L ++ +LS +LA + G ++++V+F +++G Sbjct: 8 NVILKIQSIYNSLTNAEKKVADYVLENAESVIYLSITELAEKCGTGETTIVRFCRRIGLS 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A P IH I +DPL ++ +K+ ENT A+ T+ + S + Sbjct: 68 GFQEFKLNLAKEIAE----PETSIHENISFNDPLDVLVQKITTENTLAISNTVKLLSMSE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + +AR+I G+GASG A + +K M++G N A D H + + + D Sbjct: 124 LEKAVDAIINARKIQFYGVGASGYTALDAKYKFMRLGLNVDANLDAHIQAISAVSLTDKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ G +V+AIT + + + A L T A+E S + Sbjct: 184 VAVGISFSGSTKDTVETCRLAKEAGARVIAITNYARSPITSVADIVLLTSAKETPLRSGA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D+L+ A+ + + A + + + V Sbjct: 244 LTSKIAQLHILDILYTAVAVKLKDKAVQELNKTAKAV 280 >UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C6WFA6_ACTMD Length = 304 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 131/277 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++IR GLA++++++A +L P T H S ++A AG S+++V +F + +G Sbjct: 9 SPLVKIRSLLPGLARAEQRVAKVVLDNPATVAHRSITEVAESAGTSETTVTRFCKAIGVG 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + I D LR V K+ + A+ T + + Sbjct: 69 GYPELRIALAADTARTAARTDRDLGGDIGPGDDLRQVVGKVAFADARAVEETAEQLNVDT 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+ + G GAS VA + KL +IG A D H L + + D Sbjct: 129 LQAVVDAVARAGRVDVYGFGASAFVAFDLQQKLHRIGRTCFAWNDTHIALTSAAVLTGAD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A G +A+T F + + + A H L T A E S + Sbjct: 189 VAVGISHTGSTTETVEALRVARERGATTVALTNFPRSPISEVADHVLTTAARETTFRSGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D LFI + Q +E A + + V Sbjct: 249 MASRIAQLTVVDCLFIGVAQHHVESATSALEATYDAV 285 >UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788119 Length = 278 Score = 304 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 78/282 (27%), Positives = 143/282 (50%), Gaps = 5/282 (1%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MNG L+R+R+ Y L S++K+A ++L +P +S LA +G SQ+++V+ + +G Sbjct: 1 MNGGLVRLREVYDSLNPSERKVAAFILQEPAEMIQMSVADLAVRSGSSQAAIVRLCKTMG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +KG+ LKL ++ L P + IR +D + + + + N ++ T+ + E Sbjct: 61 FKGYQDLKLKVAGDLQE----PLATGYQDIRPNDSISAIIQNVSNNNIQSIRDTMKIMEE 116 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E V L ++RI + G+GAS L+ + K ++I + D H L + +P Sbjct: 117 GMVEEAVLALDQSKRIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTP 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD + ISY+G E+ AA G K + IT + + L + LYT + E S Sbjct: 177 DDAAVCISYSGETDEVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRS 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ Q L D+L++ + ++ E + + + S +K+L Sbjct: 237 GAMSSRITQLNLIDILYLGVASRNYENSVKYLDESRRAIKRL 278 >UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F6M8_SACEN Length = 308 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A+ +L P + S ++A AG S+++V +F + +G Sbjct: 14 SPLIRIRSLLPGLARAEQRVANIVLADPASVARRSITEVAEAAGTSETTVTRFCKAIGVG 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + S + + I +D +R + EK+ + A+ T + E Sbjct: 74 GYPDLRIALAADTA-RTSSRDRDLGSDIGPEDDVRKIIEKVSYADAKAVEETADQLDAET 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + ARRI + G+GAS VA + KL +IG A D H L + D Sbjct: 133 LRSLVDAVARARRIDVYGVGASAFVALDLQQKLHRIGLTCFAWSDTHNALTSAAVLREGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A E + G A+T F + + + A H L T E S + Sbjct: 193 VAIGISHTGATTETVEALQEAGKRGATTAALTNFARSPITEVADHVLTTAVRETTYRSGA 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ Q + D LFI + Q+ L+ + + V Sbjct: 253 MASRIGQLTVIDCLFIGVAQRHLDQTKAALEATYEAV 289 >UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales RepID=C0ZD50_BREBN Length = 288 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 138/277 (49%), Gaps = 3/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++R Y L+ ++++ADY+L H S +LA++ + ++V + ++LG++G Sbjct: 11 VLTQLRAIYTQLSGKEQQIADYILEHASEIIHFSITELADQCQCADATVFRLCRRLGFRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A K+AL+ + + ++ I+ DD + + EK+ N + T + ++++L Sbjct: 71 YQAFKIALASEVTNPKQTIHQEINLD---DDDVSAIAEKIFTANIETIRDTQQIINKDEL 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V+ L +A RI G G S ++AQ+ K M+ G D H + + + + Sbjct: 128 MKIVSCLENASRIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLTKGAV 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS++G +++ A G K + IT + + L + A CLYT + E + ++ Sbjct: 188 VVGISHSGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFRTEAL 247 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ AQ L DLL++A+ + E I+H + Sbjct: 248 SSRLAQLSLIDLLYVAVSLRRQEDTIANIQHIREAIS 284 >UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulator TTE0211 n=3 Tax=Clostridia RepID=Y211_THETN Length = 282 Score = 296 bits (760), Expect = 4e-79, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L IR+ S+ K+A Y+L P LS +LAN S++S+++F + +G K Sbjct: 3 DVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ +LA Q + I +D + V +K+ N A+ +T+ V + E+ Sbjct: 63 GFQELKIKIAVSLAKQTRK----LDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEE 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +A +I G+ ASG+VA + K +I A +D H L + D Sbjct: 119 LTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G +E+ A G +++T + + L + A L+ +EE + + Sbjct: 179 VAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D+LFI + Q+ + ++ ++ Sbjct: 239 MASRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLS 276 >UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSQ6_9FIRM Length = 287 Score = 296 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 134/277 (48%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RIR Y+ L ++++K+ADY+L HLS +LA +G +++++ + QK+GY+ Sbjct: 10 GCLPRIRSIYKALTKAEQKVADYILENAAKVVHLSITELAEVSGSAEATIFRLCQKVGYR 69 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ L +P+ ++ + D + ++ K+ + + TL + E Sbjct: 70 GYQHFKIALAGDLY----TPAELVYKDVNAGDSMGVIARKVFHDINEGLQDTLKIIDEAA 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + ARRI G S ++A + ++ M+ G A D H + + P D Sbjct: 126 LDKAVAAITKARRIDAYGSAGSAVIAADIEYRFMRFGIPVRAYADPHMQIISAALMQPGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L +A+S+TG R+L + + G V+AIT + + L + A L A+E S + Sbjct: 186 LAIAVSHTGANRDLLDSVAMAKQNGATVIAITSYMKSPLSKLADITLCGSAKETEYRSEA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++A + D L++ ++ + E + + Sbjct: 246 MAARLVHLAIVDALYVGVMLDRQDCIVENMEKIRKAI 282 >UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=Dictyoglomus RepID=B8E0M8_DICTD Length = 281 Score = 293 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I+++ + S++K+A+Y+L + HL +LA GVS++++V+ +KLG + Sbjct: 4 SILEKIKEQKESFRDSEEKVANYILARWQEVLHLPITELAERIGVSEATIVRMCKKLGLR 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+AL+ P +H ++ D L + +K+ N AM +TLNV S ++ Sbjct: 64 GFQELKIALATE----KIQPIKTVHQAVQEGDDLETILKKVFSANIRAMESTLNVISVKE 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + +AR++ + G+G SG VA + K MK G A D H + + P D Sbjct: 120 IERAIDAILNARQLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILEPQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +++ A + G + IT + L + L +EE + S Sbjct: 180 VVIGISASGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYRTES 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SA AQ + D L+I + + L+ E ++ + + Sbjct: 240 TSARIAQLSIIDTLYIGVALKRLDKMIENLKLTREAI 276 >UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77F Length = 277 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 147/281 (52%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ L +++K++A Y++ P+ S+ +L + S ++VV+FA+KLGY Sbjct: 1 MSCITRIKEA--SLTETEKEIAQYIIEHPEQVLDDSAMKLGEKTHSSSAAVVRFAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFP LK+ L++ L +H D+ + + K+ + T ++ S Sbjct: 59 SGFPQLKIELAKDLVGSIPEVDNLLH----PDEDMATLMNKVHHSQIVTIDKTYHLLSAS 114 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V L A+ + L G+G S +V +F KLM+IG A D+H + +V + + Sbjct: 115 TLEDVVKALEQAKHVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNMTEE 174 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + +SY+G + + AA + +AIT N L + H L ++EQ+ Sbjct: 175 DLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSLRIG 234 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ ++ ++ DLL+ L++++ E ++I ++ +++++ Sbjct: 235 AMSSRYSSLIVVDLLYYGLVKRNKEKYAQKIINTRRIIQEM 275 >UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8T9_9THEO Length = 282 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 131/278 (47%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I++ S+ K+A Y+L D LS +LA S++S+V+F + +G K Sbjct: 3 DILTVIKELEATFKPSEAKIAKYILDNADVVTELSINELARACDTSEASIVRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ +L+ Q + + I DD + V +K+ N A+ T+++ + Sbjct: 63 GFQELKIKIAVSLSKQTKK----LDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDVKS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V L +A +I G+ ASG VA + K +I A +D H L + D Sbjct: 119 IIKAVDALSNANKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G RE+ A + G +++T F L + A L+ +EE S + Sbjct: 179 VAFGISYSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRSGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D+LFI + ++ + + ++ + Sbjct: 239 TASRIAQLTVIDILFILVAKRKYNDVVKFLENTTEALS 276 >UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=Bacillales RepID=C4L752_EXISA Length = 282 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 81/279 (29%), Positives = 146/279 (52%), Gaps = 4/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNG RIR Y L++ ++++ADY+L QP+ H + Q+A++ V++S+V +F Q++G+ Sbjct: 4 MNGTARIRGAYSTLSKKEQRIADYILKQPEQIIHHTINQVADDLDVAESTVFRFCQRVGF 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ ALK+AL+ + +P IH I D + EK+ N + +T + Sbjct: 64 KGYQALKIALASDVV----APLQDIHEDITETDTALEIAEKIFSTNGKTIESTRQILEGV 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + ARRI G G S +VA + K ++ G +A+ + H L + + Sbjct: 120 SLEKAVELFLGARRIEFFGSGGSAVVALDAYHKFVRSGLQVSAMLESHMQLMSASQLTTA 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G +E A + G ++AIT + + L + A LYT+++E A S Sbjct: 180 DVAVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETAFRSE 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ A+ L D LF A++ + E A ++ + Sbjct: 240 ALASRIAELSLIDALFTAVMMRRGEAARTSLQQMREAIS 278 >UniRef50_D2AR91 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AR91_STRRD Length = 299 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 139/281 (49%), Gaps = 2/281 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + +R L + + +A +L P + + + +G S++++V+ A+ LG+ Sbjct: 11 NLVATVRAVLPSLTPAAQAIARLILDDPGMVARSTITEFSAVSGTSEATIVRTARALGFA 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ A+A E P + + DDPL V K+ + + A+ T + ++ Sbjct: 71 GYSQLRFALAAAVAR--EEPERLVPGDLGPDDPLTDVIAKVTRAESEALADTAAQLNPDR 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + +ARR+ + G+GASGLVA + A KLM+IG ++ A D H L + D Sbjct: 129 LGAVVEAMTAARRVDVYGVGASGLVAADMAQKLMRIGRSSHAFTDAHLALTSAALLGEGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S TG ++ + G +AIT ++L + A H L + E A + Sbjct: 189 VTVGVSCTGETPDVIAPMRVARKAGATTVAITNNPRSSLAELAEHVLVSAGRETAFRPGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +++ +Q ++ D +F+ + Q+ E + +R + + + + Sbjct: 249 LASRISQLLIVDCIFVGIAQRTFETSDAALRATRGALDEFM 289 >UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A8S9N1_9FIRM Length = 321 Score = 289 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 145/273 (53%), Gaps = 1/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+R+ L+ +++++A ++L PD L+ + LA + S SSVV+ + +G++ Sbjct: 36 NVLLRLREVQPSLSSTERQIAQFILENPDETTTLTIRDLARRSFSSPSSVVRICRVIGFQ 95 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ LA+ E+ S I D L+ + +K+ +N ++ T + ++ Sbjct: 96 GYKELRHALTLELATLGENGSHR-EKDITPQDSLQEIVDKVTHKNIQSLLDTQRLLLLDE 154 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +CV ++ +AR ++L GIG+S VA++ K +++ D H+ L + ++ D Sbjct: 155 LEQCVELIANARTVLLFGIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNATAQD 214 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + SY+G E+ EM G V+A+T + P+ + Q A H LY A E + + Sbjct: 215 VGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFRNGA 274 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 +S+ +Q + D+L+ A ++ E R+ + Sbjct: 275 MSSRLSQLNVVDILYTAYASRNHEDTMRRLTKT 307 >UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulator CA_C0191 n=5 Tax=Clostridia RepID=Y191_CLOAB Length = 283 Score = 289 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 135/276 (48%), Gaps = 2/276 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+RI++ L S++K+A+Y+L LS ++LA ++G S+S+VV+ + L YKG+ Sbjct: 5 LIRIKEIINDLNPSERKIAEYILNNSKAISDLSIKELAGKSGSSKSAVVRLCKILNYKGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++A+++ + + + + I D L + + + N ++ T+ V SEE + Sbjct: 65 KEFRIAIAKDTVNVDKEENR--YTDINPKDDLHTIIKNISYNNKKSIDNTMEVLSEELVE 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + A R+ GIGAS +VA + K M+I N A D H + D+ Sbjct: 123 KASEAISKAYRVDFYGIGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKGDVA 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AISYTG ++ + G +++T F N++ L+ ++ E S ++S Sbjct: 183 VAISYTGETKDTFESIKAAKEAGATTISVTKFGSNSISDLCDINLFVLSPEITFRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + AQ + D+LF ++ + E E + ++ + Sbjct: 243 SRIAQLNVIDILFTSVAGRMFEEVKEFLENTRKSTR 278 >UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J1X3_9BACL Length = 289 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 3/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L+ ++KL +Y+L P T H +LAN G+S S+V +F + +KG Sbjct: 4 ILHAVSSHLETLSPQERKLGEYILESPATVIHQGITELANACGISPSTVTRFCKTFHFKG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP K+ L+ LA + P+ + I + L+ + E + + A++ T + +L Sbjct: 64 FPDFKMKLASELAHK---PAENHYQDIIAGNDLQKIVEAMEANHLASITDTTRLLDMNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V L A+RI L G+ S +VAQ+F KL++IG N A D H + + + D+ Sbjct: 121 SRAVEALCRAKRIDLYGVATSSIVAQDFYQKLVRIGKNCTAFADSHMQITSASSLGEGDV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LAISY+G E A G L++T ++ N+L A L++ + E+ + Sbjct: 181 ALAISYSGETPETIDALRCAKDSGATTLSLTQYSSNSLASLADIALFSSSLEEGMRRGDM 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D+LF ++ + + ++ S V+ Sbjct: 241 ASRIAQLHVIDILFTGMVSLEFQDFIPKLESSYQNVQ 277 >UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n=51 Tax=Bacillus RepID=A8FJ30_BACP2 Length = 285 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 136/277 (49%), Gaps = 3/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +IR +GL K +A+++ +P HLS +LA + S++++ + ++LG++GF Sbjct: 9 IEKIRAASRGLPPKLKAIAEHITSEPRDIIHLSIVELAKKTASSEATIFRLCKRLGFEGF 68 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+A+++ + ++ + ++ DD + + +K+ + N +A+ + + + E + Sbjct: 69 QDLKIAIAQEI---DQTKPNYVDEEMSLDDDMAVFMQKVFQTNISALKDSFQLLNPEDVE 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + ++ A+R+ G G SGL+A + K M+ G N D H + + Sbjct: 126 KAIQIIHEAKRLEFYGSGGSGLIATDAFHKFMRTGINCIVHTDSHFQAMSAGLLDQHSTV 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS++G ++L A G K + IT + + L Q A LYT +E A + ++S Sbjct: 186 IGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLADVTLYTATQETAFRTEAMS 245 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A AQ + D+L+ AL + ++ + + Sbjct: 246 ARLAQLTVIDVLYFALAHLRQQETITNLKQMRETISQ 282 >UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJF9_BREBN Length = 297 Score = 286 bits (734), Expect = 4e-76, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 132/277 (47%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I+ +S++K+A +L Q D+ + S LA +AGV +++V++F +K+G+ Sbjct: 20 NTLLHIQSLLPSFTKSEQKVAHIVLQQTDSVIYSSVIDLAEKAGVGETTVLRFCRKIGFH 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL++ L + P +H ++ DD L ++ K+ N A+ T + E+ Sbjct: 80 GYQEFKLALAQELVN----PVKNLHGEVGEDDSLDIITHKVTATNQQAIGDTSALFQLEQ 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV +L+ A I G+G S + AQ+ + ++IG A + H P D Sbjct: 136 LERCVDLLQKANTIHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLGPGD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G ++ + + G + +T + + + A L T A+E S Sbjct: 196 VAIGLSVSGSTKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQGGS 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++A AQ + D++ + ++ E A + V Sbjct: 256 LAAKIAQLHVLDVISTTITMRNKEKALLYKERTAKAV 292 >UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7K6_PAESJ Length = 284 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y ++KK ADY+L D ++S LA GV ++S+ +F + LG+K Sbjct: 5 SITSTIHSHYNRFTATEKKTADYILEHADAVVYMSITDLAEGCGVGEASIFRFCKALGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ ++++ E P + +I+ D L K ++ N A+ T + + Sbjct: 65 GYQQFKIALAHSISADNEIPQLSGQVKIQ--DTLEDAVSKTLQSNINALNETFKLIQLDS 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ + +L + R I G+G+S + A K M+I D H + D Sbjct: 123 INRAIDLLIRSDRFIFYGVGSSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMGERD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + ISY+G ++ A + G ++ IT F + L + L A E S Sbjct: 183 VAIIISYSGSTKDSIEVAKKAKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQGGS 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +SA AQ L D+L++ ++ E + ++ A V Sbjct: 243 LSAKIAQLYLLDVLYVEYFKRTYEASIVNKENTSAAV 279 >UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4B4_9BACL Length = 288 Score = 286 bits (732), Expect = 7e-76, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 130/277 (46%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L++IR + L ++ +A+Y+L + HLS + LA + S +SV++F + +GY Sbjct: 7 NILIKIRDMKENLTPVERMVAEYILANTEDIPHLSIKSLAKLSKTSDASVLRFCKTMGYS 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + +++S AL S + + I+ D L + + + N ++ TL+V + Sbjct: 67 GYRSFIVSISAALGSMDDERK-DQYTDIQPGDDLDTIIANISRNNMKSIEDTLSVLDRGE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V LR++ RI+ GIGASGLV Q+ K +I + D H+ L D Sbjct: 126 VARAVKALRASNRIVFFGIGASGLVCQDGEQKFSRINKMCHSYTDGHSQLTAATLLGKGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G E+ + + +AIT + + L +A L E S + Sbjct: 186 VAIFVSNSGNTLEIIETLEIAKKNNATTVAITKYNKSELADKADILLGISTPEITMRSGA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + A + D+LF + + + + + + +++ Sbjct: 246 MGSRIAMLTIIDMLFAGVASAEYQNVKKYLTKTHSIL 282 >UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GD47_CLOBL Length = 281 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 147/281 (52%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LLRIR+ + + +S+KK+A+Y+ P S+Q++A + S +S+++F +K+GY Sbjct: 1 MGVLLRIRENFDSMTKSEKKIAEYIFKSPKDIISDSAQEIAIKTSTSPASIIRFTKKVGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K AL +A + S I +D + + KL + + T + +E Sbjct: 61 NSLNEFKFAL---VAEEYTKESTEFDYIINYNDSIDSIINKLGNKVIDTINDTKELVDDE 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL E V +++A I L G+GAS +VA +F +KL++I +D H LA + Sbjct: 118 KLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNR 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G RE+NLA +E + G +AIT + L A L + E+ Sbjct: 178 DVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ L Sbjct: 238 AISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVL 278 >UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIQ0_CLOPH Length = 284 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 122/278 (43%), Gaps = 1/278 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 RI Y +S+K +AD++ P+ + S LA GV ++V +F + L Sbjct: 4 GIFARIESSYSKFTKSEKIVADFVFENPEKVLYTSITDLAEICGVGDTTVFRFCKALKLN 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ L++ +A + I+ + DD ++ + +K + + AA+ T + E Sbjct: 64 GYQEFKMFLAQDIAVR-TGSDYTINGSVSQDDDIQTICKKALAVDIAALTETFEGLNFEA 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V M+ +A ++ G+G+SG++A K M+I N + D H + S D Sbjct: 123 VTKVVDMISNANKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSSRD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + SY+G ++ A+ G KV++IT + + L + + + E + + Sbjct: 183 LAIIFSYSGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVVIPCGSNEGPLDGGA 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S Q + D+L++ + + + + Sbjct: 243 SSTSMVQFYILDILYLLYFTKHYHQSKLNKAKTTESIS 280 >UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM2_KOSOT Length = 283 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 4/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I +++KK+A +++ P ++S ++++ VS+ S+V+F QKLGY Sbjct: 6 NVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+AL+ S+ + D L + + + + + T SEE Sbjct: 66 GFHPFKIALA---VSENQESFSSSEFDFNSRD-LSSLKNYVAQRHIDVIKNTSEFISEEI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV + +AR I+++G+GASG A + +K M+IG N D H D Sbjct: 122 LEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAIS +G E+ AD + G V+AITG+ + L + A H L T E S + Sbjct: 182 VLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + AQ + +LLF A+ + E + I + V K + Sbjct: 242 LRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWI 282 >UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8M2_9ACTN Length = 291 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 138/274 (50%), Gaps = 1/274 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++R+R+ L ++K +A Y+L P + LS + LA + VS ++VV+ + +G++ Sbjct: 3 NIIIRLRENIGFLNPAEKAVARYVLQCPHESNRLSVKALAARSFVSPAAVVRMCKSIGFE 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K L+ LA++ + I+ +D L + +K+ +N ++Y L + E Sbjct: 63 GFKEFKTELTRELATEKLILPLD-TKDIKQNDTLESIIKKITLKNIHSLYDALRLIDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L++ RI+L G+GAS + A++ K +++ D H L T + S+ D Sbjct: 122 IEKAVELLQACDRILLFGLGASLIAAKDANLKFLRVNKTCLINDDWHLQLITARNSTSQD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + ISY+G E A+ + ++AIT + + + A LYT + E SA+ Sbjct: 182 VGIVISYSGQTAETLTCAEILKHNNTPIIAITRCIESPISKLADVLLYTTSNESLFRSAA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S+ +Q + D+L+ A D E + + Sbjct: 242 MSSRISQLNIIDILYTAFAVSDYEKNFTYLSKTR 275 >UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=Actinomycetales RepID=A8LV24_SALAI Length = 320 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 74/279 (26%), Positives = 137/279 (49%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L R+R L + +++A+++L P+ A + +LA +G S +++ +F + +G++ Sbjct: 32 GVLARVRAGADDLTGALRRVAEHVLSDPEAAARATIVELAERSGTSPATITRFCRAMGFE 91 Query: 62 GFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L+L ++ + +V I +I+ DPLR V +++I +T AM+ T + Sbjct: 92 GYADLRLGIAAETGRARLAGWTVDIGREIQPGDPLRRVLDQIIAADTRAMHDTAALLDLA 151 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + A R+ + G S LV + + L +IG A A D+H LA+ Sbjct: 152 EVERAAVAIAGASRVNIFGASGSALVGEEMQFMLHRIGVAAWAWSDVHEGLASAALLRVG 211 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ L +S++G RE E G +A+TGF + L + A L T + Sbjct: 212 DVALGVSHSGQTRETIEMLAEAGSRGATTVAVTGFPRSPLAELADIALLTASRATTFRPD 271 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++SA H Q ++ DLL+IA+ Q+ + A +R + V Sbjct: 272 ALSARHPQLVVLDLLYIAVAQRTHDRAHAALRRTAQAVD 310 >UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BD8 Length = 265 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 3/260 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 LA Y++ + +LA + S +++ +F + L ++GF KL LS LA Q Sbjct: 2 LASYIVEHAHEVVSMGITELAERSQTSPATISRFCKSLHFQGFTDFKLKLSGELAKQ--- 58 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 PS + I +PL + + + ++ T +N ++L + V+ L++AR+I L G+ Sbjct: 59 PSEHSYQDIVAGNPLSEIVSAIEANHLRSIADTTQLNDIKQLQQAVSALKNARQIDLYGV 118 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 SG+VAQ+F KL++IG + D H + + +D++ AISY+G E A Sbjct: 119 ATSGIVAQDFYQKLVRIGKRTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQALR 178 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 G +++T F N L + L+ E+ +++ AQ + D+LF +L+ Sbjct: 179 CAKERGAVTISLTKFGTNPLANLSDIRLFASTLEEGMRRGDMASRIAQLHVIDILFTSLV 238 Query: 261 QQDLELAPERIRHSEALVKK 280 ++ + R+ S LV+K Sbjct: 239 SEEFDELIPRLERSYQLVRK 258 >UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8T9_9ACTO Length = 312 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 2/281 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR LA S +K+ + +L P H S+ +L G SQ++V +F + +G + Sbjct: 23 DVTTLIRTELPRLAGSLRKVGELILEDPAAVTHCSAAELGRRTGTSQATVTRFCRAIGLE 82 Query: 62 GFPALKLALSEALASQPES--PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + L + L++ S S I I DD L V + + + A+ T+ Sbjct: 83 SYQHLLIELAQERGRGEVSDWGSAEIGPDISPDDSLERVVQVVGSADLRAIQQTIERIDL 142 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L L ARRI + G+G SG VAQ +L +IG ++H + +P Sbjct: 143 DALERAAQALAKARRIDVYGVGGSGAVAQETETRLFRIGCQVRGWTEVHGAATSAALLTP 202 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS++G RE + G +AIT + L + A L + E + + Sbjct: 203 ADVAIGISHSGATRETLEPFEMAKERGATTIAITTDPRSPLAKAADIRLISATSETSFRT 262 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SI H+ M+ D L++ + Q + A + ++ + + Sbjct: 263 GSIGGRHSVLMIVDCLYVRVGQVAYQRASASLALTDHITPQ 303 >UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ1_HIRBI Length = 297 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + RIR R L S +ADY+L + +S +LA G S+ SV+ ++LG Sbjct: 20 NVISRIRIRKDSLGPSTSTIADYVLGHANAVVGMSVTELAEATGTSEGSVINLCRQLGLS 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH ++ D V +K+ + A+ TL++ + Sbjct: 80 GFQQLKLSLAQEVVR----PVQFIHEDLQPSDDTSTVCQKMFHAGSEALRETLSILDPDA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++RSA R+ + GIG+S +A++ +++++IG +A V D H + + P+ Sbjct: 136 ISMAVDVIRSADRVEIYGIGSSAPIAEDAQYRMLRIGLDAKVVVDSHIQAISASRTGPNV 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G K + IT F + LQ A LYT+A E S + Sbjct: 196 AVLTISHSGSTHETLAATRLARDAGAKTIIITNFASSPLQAYADVKLYTMARETKFRSEA 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D+L AL D E A +R + ++ Sbjct: 256 MTSRIAQLCILDVLIAALALDDYERATTVLRQTSEVLS 293 >UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7S3_BREBN Length = 288 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 146/274 (53%), Gaps = 3/274 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 ++ L S++K+ADY+L P+ LS Q+LA +GVS++++++ A+ L KG+ L Sbjct: 12 LQAILDQLKPSERKVADYILAHPEDVVKLSVQKLAEYSGVSEATIIRLARSLNMKGYQEL 71 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 KL ++ L Q S + +I + + + + + N ++ TL+V S E++ + V Sbjct: 72 KLRVAGDLTKQTARGS---YQEIMMEGSVESIMQAVSWNNIQSIQDTLSVLSNEEVKKAV 128 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L AR+I + G+GAS ++A + K +I A D HA L + + D+++ I Sbjct: 129 DVLSVARKIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKDVVIGI 188 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 SY+G ++ + E + G ++ +T F P+ + + A+ L+T + E++ S ++++ Sbjct: 189 SYSGQTEDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGAMASRI 248 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D+LFI +I + E + S V + Sbjct: 249 AQLNVIDILFITMISRMQERVIPLLEKSRLAVSR 282 >UniRef50_P44540 Uncharacterized HTH-type transcriptional regulator HI0143 n=33 Tax=Gammaproteobacteria RepID=Y143_HAEIN Length = 288 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 138/277 (49%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V +L+ ARRI L G+G+SG+ A++ KLM+IGF A + H + + D Sbjct: 126 LEEVVKVLKKARRIFLFGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S++G E + G +A+T + + + A + L ++ S Sbjct: 186 VAIGLSHSGYSAETAHTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I AQ + DL++ L+Q + ++A + + + ++ Sbjct: 246 IGTKIAQLFVLDLIYALLVQGEEDIAAQTKQKTLNVI 282 >UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSK7_9FIRM Length = 282 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR R L +++K+A+Y+L D + + +LA A VS +SVV+F + LGYK Sbjct: 5 SCKEIIRGRMNYLTNTERKIANYVLENYDQVLNSNITELAENAKVSDASVVRFCRSLGYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ ++ + + + ++ + D ++ K+ + + TL + + Sbjct: 65 GYQDFKINAAKDVLPREK----HLNPILEESDSPDMICHKIFNLEISVLERTLASLNMRE 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + +R++ G G S LV Q+ K MKIG D L + D Sbjct: 121 VEKAAQFIFHGKRVLFFGSGGSLLVGQDALHKFMKIGVQVYVHEDRDLQLMASSLAGEGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS++G + G + +A+ L + A + T +EE S S Sbjct: 181 VVIGISHSGSNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIADVVIDTASEETIFQSES 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S AQ + D L + + + + I+ + + Sbjct: 241 VSTRIAQLAIIDSLVSIVAFMNYDESYRAIQKTRKATSE 279 >UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2G7_BEUC1 Length = 285 Score = 279 bits (714), Expect = 9e-74, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+ R A S +++A+ +L +P + +LA++ S++++V+F + LG Sbjct: 1 MSIQSSIQSRLDQFAPSMRRVAEAILERPQVVLEKTISELASQCETSETTIVRFCRTLGL 60 Query: 61 KGFPALKLALSEALASQ--PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ L+L L+ + + I +D L + K+ +T + TL Sbjct: 61 TGYVQLRLELATEIGRENAQRGELGDHGADILAEDGLAAMAAKIAFTDTLGIEETLASLD 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E L V + +A R + G+G+SG A + KL +IG A D H + SS Sbjct: 121 IEHLERVVDAIDTAGRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPHDAVTAAALSS 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+ +A S++G RE + G + +A+T +AL + A L T E Sbjct: 181 PGDVAVAFSHSGATREALAFLATAGKHGARTVAVTNSAESALARAADIVLVTSVRETQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++++ AQ M+ D +F+ + Q+ + + ++ + A ++L Sbjct: 241 SGAMASRIAQLMIVDCIFVGVAQRRYDQTVDALKSTYAAAQEL 283 >UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TJ91_CLOBB Length = 285 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 133/277 (48%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RI Y L ++KK+A Y+L P H S +LA + S+++V + KLGYK Sbjct: 8 GCLERITNIYSELKGAEKKVAQYVLENPKNIIHFSITELAEVSKASEATVFRLCSKLGYK 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK+ L+ ++ P I+ +++ +D ++ K++ N ++ +TL +N E Sbjct: 68 GYQDLKINLAGSVIE----PIDNIYEEVKENDDTYIIMRKIMSSNINSIESTLKINKTED 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + ++ +A++I+ G+G S +A + K ++ G + A D H + ++ D Sbjct: 124 LDKAIAIILNAKKIMFFGMGGSWTIANDAYHKFIRTGIDCVASCDSHWQVMFSSMANSGD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++A S +G +EL + + G K++AITG + L + + L E S + Sbjct: 184 AIIAFSNSGSNKELVENINLAKKRGIKIIAITGNEKSPLAKISDLHLIAYGNESMFRSEA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + M+ D L++ + + + + + Sbjct: 244 MESRLTSLMIVDWLYVGVAIKRKDKTLGNLERIRNGI 280 >UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9W4_9FIRM Length = 280 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 6/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL ++ Y L +++KK+ADY+ +S +LA E V+ +SV +F + +G K Sbjct: 5 NVLLSMQLSYNQLTRTEKKIADYVQKNAQKVLFMSITELAEECHVADASVHRFCRTIGAK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ LS + + + + ++++K + A+ T + +EK Sbjct: 65 GYQEFKMWLSINMGHEKGEEESEEEDGKEP------IFQQVLKSHLEAINETNQLLDKEK 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V ML AR+I+ G+G S A K + + D H + +D Sbjct: 119 VDQAVRMLTEARQIMFFGVGDSKTAAIEANNKFLHVTPKVMCAGDTHLQAMAASMMTEED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL +SY+G ++ A G KV++IT F + L + + L ++E S Sbjct: 179 LLFVVSYSGSTKDTVEVAQIAKEAGAKVISITRFLKSPLTEFSDCVLICGSKEGPLEGGS 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A +Q + D+L+ + + + A E + + V Sbjct: 239 MGAKLSQLHIIDILYQCYFKANGKKARENRQKTANAV 275 >UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITC5_RHOCS Length = 280 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 5/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR GL +S++K+AD +L QP + S +LA++A VSQ +VV+F + +G G Sbjct: 1 MLDRIRSMRPGLRRSEQKIADIVLRQPHAVVNASVAELAHDADVSQPTVVRFCRSIGCSG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL L++ LA+ P P + +R DDP+ + KL+ + A+ N + + L Sbjct: 61 YQDFKLRLAQDLAAGPARP----EDAVRPDDPVAEIAAKLLNRSIGALTRLRNQLNPDAL 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L RR+ G GASG+VA + K ++G A D H P + Sbjct: 117 EAAVQVLTETRRLDCYGFGASGVVALDAQNKFFRLGLPVVAHTDSHVQAMAAALLGPQGV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LA+S +G REL + D L G +V+AIT + L RA+ L A E ++ + Sbjct: 177 ALAVSRSGRTRELLRSVDLALAGGARVIAITA-GGSPLAGRATVPLLVDAPEDSSPYTPM 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ A + D+L +A + + +R A ++ Sbjct: 236 TSRIAHLAVVDILQVATALRRGVHTGDPLRRPAAALR 272 >UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8RRF4_9CLOT Length = 289 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 140/279 (50%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RI++ + ++K + +L P+ A S +QLA++ S +++V+ +K+G+ Sbjct: 3 SVLVRIQEYSAQASGAEKGVLRFLRENPEEAAGYSIKQLADKTFSSAATIVRLCRKMGFD 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ +L A + + P+ +I+ DD L + K+ +N ++ T + + Sbjct: 63 GYKELQKSLLYESALR-RESTRPMEQEIKKDDSLEELVNKVTYKNIVSLDNTRKLVDLDI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L++CV +L ++ + L GIG+S LVA++ KL+++ D HA L + D Sbjct: 122 LNQCVELLDRSQTVYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIRSCD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L L +SY+G+ E+ A E V+ I+ F + L + A + L A E S + Sbjct: 182 LALIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFRSGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ +Q + D+L+ A + + + E+ R + + Sbjct: 242 MSSRISQLNMIDILYTAYVHKRYDECMEQFRKTHIAKSE 280 >UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LA29_STAHJ Length = 283 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 136/276 (49%), Gaps = 2/276 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+ I L S++++A+Y+L PD + S Q+LA+ VS ++VV+ ++KL KGF Sbjct: 5 LIIIESSLSDLNPSERRVAEYILEHPDEIINYSVQKLADLTNVSVATVVRLSKKLKCKGF 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL ++ L + +I D + V + + NT + T + S E + Sbjct: 65 QDLKLKIAYDLNE--PGNIQRGYAEIDKDYSIEEVTQTVFHNNTKTLRDTERILSTENIK 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 ++ ++R+ + GIGAS L+AQ+F KL +I + + S +D++ Sbjct: 123 HAFELIVNSRKTCIYGIGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSSEDVV 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AIS +G +++ + G KV++IT + N + + L+ + E+A S ++S Sbjct: 183 IAISSSGQTKDIVNSTQLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A + D+L+I + D +++ ++ +K Sbjct: 243 SRIAMLSIIDILYICIASNDYLSNRQKLENTRKAIK 278 >UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1J5_9FIRM Length = 282 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 4/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I + L +S+KK+A+Y+L P+ + +LA G S +S+V+F + G KG Sbjct: 6 FLQLIEDKLGTLTKSEKKIAEYILEHPNRVVDATITELAERIGTSDASIVRFCKLFGCKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K+ L+ + + ++ + D + +K+ A ++ TL + + E L Sbjct: 66 YQNFKIRLAREVVPHYKQ----LNVALEQHDTALTICQKIFNTEIATLHETLEMLNVEHL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +R A I + G G S +VAQ+ K +K+G + D + D+ Sbjct: 122 QTMAQRIREADYIEVFGSGGSSVVAQDIRHKFLKVGIRCTVLLDADIQAMSASLLKKGDV 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG + + + G V+ +T + + + A + ++E S S Sbjct: 182 AIGISHTGSTKSVFHCLKMARKNGAYVILLTTQAKSPIGRIADLVIPVGSKETLFKSEST 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SA A+ ++ D + + D + +I + + Sbjct: 242 SARIAELVVMDAVLALAVSDDYKKYNVKITKTRDATSE 279 >UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=Gammaproteobacteria RepID=B4EZY5_PROMH Length = 295 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 126/279 (45%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + L + +++ADY+L P LS QL+ +++VV+F + LGYK Sbjct: 13 KILDTLGAMKNSLTRVSQRIADYILFHPTEVTQLSIAQLSQATKAGEATVVRFCRTLGYK 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L+ +A+ S + ++ D + +G KL + TLN+ ++ Sbjct: 73 GFQDFKMDLAIEMATSDNDESPILDAEVSHQDDIHTIGLKLQATINNVLSETLNLLDMQQ 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L SA + + G+G+SG+ A++ KLM+IG+ AV + H + D Sbjct: 133 VQGAVNALLSANYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNHFMYMQASLLKSGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E A G +A+T + + + A H L + S Sbjct: 193 VAIGISHSGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHLINGNRQGKLQGDS 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I AQ + DLL+ L+Q E E+ + +K+ Sbjct: 253 IGTKTAQLFVLDLLYTLLVQAKPETVKEQKLRTLNALKQ 291 >UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=Burkholderiaceae RepID=Q1LPJ6_RALME Length = 338 Score = 276 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Y L S+++LADY+ + L+ +LA+ AGVSQ ++ +F LGY G Sbjct: 1 MRDRILAVYDSLRPSERRLADYVARHGASVIRLTMPELADRAGVSQPTIARFCAALGYDG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F KL ++ + + +H + DD + K+ A + + N S +++ Sbjct: 61 FKEFKLQFAQNVG----GGTPFVHQDVEADDRPADIAGKVFDRTIATLMSVRNALSADQI 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L ARRI G G SG+VA + K ++G A D H + P D+ Sbjct: 117 EHGIRLLAGARRIEFYGCGNSGIVALDIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGDV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + +S +G ++ AA G VLA+T + L + A C+++ EE + + Sbjct: 177 AVLVSNSGRTWDMLTAATLARSSGASVLALTHSG-SPLARLADVCVFSDVEEDSEVYTPM 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +L D+L + + ++ ++A +++ Sbjct: 236 TSRICHLVLGDVLAAGVALDRADSVAAGLQRAKAHLRE 273 >UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI47_9CLOT Length = 285 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 148/275 (53%), Gaps = 5/275 (1%) Query: 6 RIRQRYQGLAQ-SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R++ + + ++ K+ +++ + H+S A GVS++++V++AQKLGYKG+ Sbjct: 11 RVQSILPSINKKNEMKIYEFIEINRKEIIHMSVADAAEACGVSEAAIVRYAQKLGYKGYQ 70 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 A+K+++++ + P I+ Q+ D + + +K+ N ++ T +V S E + E Sbjct: 71 AMKISIAQDVIE----PGQQIYGQLSKGDTIPTIVDKIFDSNIQSLRDTSDVLSRENIDE 126 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V ++ RR++ G+G SG VA + K +KIG+ A A D + + D+L+ Sbjct: 127 AVNLILGCRRLLFFGVGGSGCVAMDGQHKFLKIGYMAMAFTDSNLQAMAASVLTSRDVLV 186 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A+S++G +++ +A D + G K +AIT + + + ++A LYT + E A NS ++S+ Sbjct: 187 AVSHSGASKDILMAMDIAKQSGAKTIAITNYGKSPIVEKADVVLYTSSNETAFNSDALSS 246 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ + D+L+I + + + + I + + Sbjct: 247 RIAELTIIDMLYIGVSYKRYDESYANILKTRKALD 281 >UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=Bacteria RepID=A6LRF3_CLOB8 Length = 294 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 4/283 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I+ Y L S+KK+ADY+LL + ++ +L+ + GVS+ ++++F + +G Sbjct: 6 SYEYKIKNMYNLLRSSEKKVADYVLLNGHSVSTMTLAELSRQVGVSEPTIIRFVKSIGCS 65 Query: 62 GFPALKLALSEALASQPESPSVP----IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 G+ K+AL + + + I D+ + V K+I A+ TL + Sbjct: 66 GYSEFKMALMKEWGRESVDKQYDSKLLVELHIDRDEKIEDVPVKMIGLTIKALEDTLKII 125 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 K + + M+RS+ I + G+G SG VA + K ++IG A D + Sbjct: 126 DINKYKKAIEMIRSSNIIDVYGVGNSGSVASDIRNKFLRIGLECRAYSDSNIQQICASHL 185 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +DL + +S++G + A G + +A+T F A+ + A +T EE Sbjct: 186 TSNDLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYADITFFTGGEETTF 245 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S ++ + +Q + D+L++ ++ D +L +R+ L+K+ Sbjct: 246 YSETMVSRISQLAIVDMLYMGILLDDYDLYTKRLEKINLLLKE 288 >UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PDB4_BACCO Length = 283 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI+ Y + ++K+ADY+L P H + Q+A++ V+ ++V +F +++G+ G Sbjct: 10 CLHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK+AL+ A P + ++ D + V K+ + N + T++ +++ L Sbjct: 70 FQALKIALAAEAAR----PGKNMDEAVKDTDNEKAVAIKVFESNIETLQDTIHTLNQKHL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 HE V + A+ I+ G G++ ++A + K ++ A D H L + + +D+ Sbjct: 126 HEAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKEDV 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+ G +E+ + + G K +AIT F + L Q+A L+T+++E +S Sbjct: 186 AVFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFSSF 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 SA Q L D L++ ++ + + E ++ + Sbjct: 246 SARIVQLSLIDTLYVNVMLRYKDTNEEILQKGKETYT 282 >UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789683 Length = 289 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I Y L +++KK+ADY+ P+ + L+ +AGV ++SV++F +KLG++ Sbjct: 12 NTLLMISSIYSSLTKTEKKVADYVKGFPEETVLATVTDLSEKAGVGETSVIRFCRKLGFR 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL++++ L + P + I D L V KL ++ + TL++ + + Sbjct: 72 GFHEFKLSVAQDLVDR---PPSVVDTSIDEQDDLMTVARKLTMQHEILLKNTLDLVNADN 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ + G+G+SG+ A + ++LM++G N A RD H + + D Sbjct: 129 LRMAVDKLLAANKVYVYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVKKGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ AIS +G R+L A E + G V+ +TG + + A L + E T + Sbjct: 189 LVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ Q + ++L L + + + + + ++ KL Sbjct: 249 LATKFMQTYMLNILTTLLTMKKEDASESLKKTASSVADKL 288 >UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Clostridiales RepID=C2L140_9FIRM Length = 285 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +IR Y +++KK+ADY+L PD +S LA V +SV +F + + K Sbjct: 4 DFLTKIRSAYNQFTKAEKKVADYILQNPDQVLFMSISDLAETCKVGDTSVFRFCKTMNVK 63 Query: 62 GFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K+ LS ++ + ES N D+ + + K+++E ++ T ++ Sbjct: 64 GYQEFKMTLSLSMRGNGKESKEGDGGNVSLQDNNIAELAGKVLEETIDSIKETHSLLDFN 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E + L A+RI+ G+GAS L A K +I + L + Sbjct: 124 KVTEAMNALSKAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATMERG 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G R++ A G V++IT F + L L A + Sbjct: 184 DVAVIFSYSGATRDIVEIAKLAKESGATVVSITRFQKSELTDYTDILLLCGANVGSLQKG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S SA +Q L D+++ ++ E + + + +K Sbjct: 244 STSAEISQLFLVDIMYTEYYRRHYEYCNQILEKTTVAIK 282 >UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=cellular organisms RepID=Q1QSE2_CHRSD Length = 289 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 7/280 (2%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ +R+R + +S++K+A ++L P+ H+ LA EA VS+ +VV+F + L Sbjct: 1 MSSALFDEMRRRMEHFRRSEQKVARFVLRHPEDVIHMRIVDLATEAKVSEPTVVRFCRAL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G GF KL L++ LA+ + +++ D + + + + + Sbjct: 61 GCNGFQDFKLKLAQMLATGSQFAQFSMND----SDSVAEFAHNIFDSTVGTLLSVRDRLD 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L + VT L A R+ G GASG VA + K ++ + AA D H + + Sbjct: 117 HAALGKAVTALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTAAYTDPHMQNMSAVTLT 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+++AIS TG R L + G V+ + + + L + LY E Sbjct: 177 PRDVVVAISQTGRTRALVASVRLARETGATVIGL-CPSDSPLASEVTLPLYIDVHEDTEI 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ A ++ D+L + + + E+++ + + Sbjct: 236 YTPMSSRVAHLVIIDVLAVGVAKTRGPKLAEQLKSVKKSL 275 >UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJ20_EXIS2 Length = 284 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 +I ++ L S +K+AD++L + ++ LA E+G S ++VV+F + LG K Sbjct: 4 GIFSQISAVHEELPSSSRKVADFVLAHMNEIAGMTIHHLAEESGTSAAAVVRFCRALGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++ +S A + ++ I ++ + EK + + A+ T SE++ Sbjct: 64 GYPELRMRISADTART----DLKGYHDIEKNERPADLVEKTVSNSIQALQDTAKQLSEDR 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E +L AR I GIGAS +VA + A K ++G D H + + +S DD Sbjct: 120 IAEAADVLDQARAIYFYGIGASNVVALDAAQKWTRVGKLTIQESDQHLVATILANASQDD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + AISY+G E+ G KV+++T F N + Q A L+T A E SA Sbjct: 180 VFFAISYSGETEEVVELIRLAKIRGLKVISLTRFGDNRVSQLADIALWTSRAPEAPLRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ AQ D+LF++ + ER++++ VK L Sbjct: 240 ALSSRLAQLFAIDVLFLSYAAVHYDDTIERLQYTRESVKML 280 >UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n=22 Tax=Gammaproteobacteria RepID=A4TMJ1_YERPP Length = 292 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 129/279 (46%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + L +S +++A Y+L QP LS L+ ++++++F + LGYK Sbjct: 12 KILDALGAMQNSLTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYK 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L+ +A++ S + + ++ D +G KL + TLN+ S E Sbjct: 72 GFQDFKMDLAIEVATRHNSENSLLDADVQEGDDTLAIGSKLQSAINNVLSETLNLLSIES 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +LR A RI + G+G+SG+ A++ KLM+IG A + H + +P D Sbjct: 132 VEQVVKVLRPADRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMNPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E A G +A+T + + + A + L + S Sbjct: 192 VAIGISHSGTSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQGDS 251 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I AQ + DL++ L++ D A R + V + Sbjct: 252 IGTKIAQLFVLDLIYALLVKADPAQAESIKRKTTQAVSQ 290 >UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUK3_9FIRM Length = 280 Score = 273 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +I+ + + +++ + Y+L +++ +L +G S ++ +FA+K+GY Sbjct: 1 MSCITKIKSALESMTATEQMIGRYILEHRHEVLEMNTLELGWASGTSGAAWTRFAKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PALKL L++ + + + + D L + K + T + E Sbjct: 61 KGLPALKLDLAQD---RTDEEMPEVDLFLDPRDTLGALLHKTQTILEQNLRRTYELIDEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + M+ SA R+ L GIG SG+V + KL +I RD H L+A + P Sbjct: 118 VLAQAIDMMASAHRLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHCMPG 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITG-FTPNALQQRASHCLYTIAEEQATNS 239 D++L +SY+G +N A G K++AITG L A CL+ +E+ Sbjct: 178 DVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKEIRL 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+++ ++TDLL+ + Q+ E + + +++K+ Sbjct: 238 GSVTSRDGSLIVTDLLYYGVAQRQFHATKEHLVKTRKMIRKI 279 >UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N1V0_9FIRM Length = 277 Score = 273 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I++ ++K +A Y+L S+Q L + G S +++++F++KLGY Sbjct: 1 MNSYAKIKEAQSSYTSTEKVIAKYILENAADVLKCSAQSLGEKTGTSAAAIIRFSKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK++L+++ +P I I +D + + +K + N + T + Sbjct: 61 NGFSELKMSLAQS----KRAPEEKIDFIIDENDDIVTLADKCCRLNMNTVLKTYQLIDTN 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L +A I L G+G S +VAQ+ KL +IG +D+H L ++ + + Sbjct: 117 QLDNAIKKLIAANTIYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESMNKE 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G + L A + +++IT F PN L + + L EE+ Sbjct: 177 DAALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEIRMG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ + ++TDLL+ + + DL +++ ++ +V K+ Sbjct: 237 AISSRISSLVMTDLLYYGVFKNDLTGNKDKLIETKRIVSKI 277 >UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A5_9CLOT Length = 282 Score = 272 bits (697), Expect = 8e-72, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 134/276 (48%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R Y+ L+ ++ ++ +Y+L P + +LA E+ S ++VV+ +K+ Sbjct: 6 MSVLIKLRD-YRNLSAAENQVREYILKYPKKVLEYTVYELAKESFTSPATVVRLCKKIDI 64 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF LK+ L+E Q ++ I +D + EK+ + T + +E Sbjct: 65 KGFARLKVLLAEETKYFQDMKLNLLDTTTIEKNDSPHAIIEKITNIAVKTIEETRVLVNE 124 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ + +L+ A + G+GAS VA + +K M+IG N + S Sbjct: 125 KQFMQVARLLQKAVIVDFYGVGASSPVAIDAQYKFMRIGKNVITYQLYDRQYVQAVNSDA 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + ISY+G +E+ A + + G V+A+T N+L + A + L+ A+E S Sbjct: 185 SHVGIIISYSGETKEMLKIAGILQKNGTPVVAVTSSGENSLNRIADYNLFVTAKETVFRS 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++++ AQ + D+L+ D + + ++I+ + Sbjct: 245 GAMASRTAQLYIIDILYALYCSLDYDESIKKIQQTR 280 >UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulator ybbH n=7 Tax=Bacillaceae RepID=YBBH_BACSU Length = 283 Score = 272 bits (697), Expect = 8e-72, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 5/279 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L I+ L S++KLADY+L P A + +++ A S ++V++ + LG KGF Sbjct: 6 LAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGF 65 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ ++ LA P+ + I +PL + EK A+ T ++ ++L Sbjct: 66 QDLKMRVAGDLAK----PTFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYKELE 121 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V++L A + G+GASG+VA++ K ++I A A D H + + + + DD++ Sbjct: 122 RAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKDDIV 181 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASI 242 AIS++G +E+ G +++T F+ ++ A LYT + E SA+ Sbjct: 182 FAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRSAAT 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ AQ + D+LF+ + + E I + A ++ + Sbjct: 242 SSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAAIQSM 280 >UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9A2_9FIRM Length = 336 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 120/261 (45%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I ++Y L +S KKLADY+ ++LS LA +GVS++++ +F +KLG Sbjct: 55 NILDLITEQYPTLTRSGKKLADYIFANTTETQYLSISALAENSGVSEATITRFCRKLGLS 114 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLA++++ + I D L + +KL+ N ++ T ++ E++ Sbjct: 115 GYNDFKLAIAKSDHVTDMGEPSGSPSTITSQDSLPDIFQKLLSANILSLTETFDLLDEKE 174 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V +L A + G G+S ++A + + D H + ++ ++P D Sbjct: 175 ISRAVDLLYGAHHVYCLGNGSSSVMAMEAWARFSTASTRFIHIADSHMQMLSIALATPQD 234 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L SY+G R++ + + V+ +T F + A L E S S Sbjct: 235 VILFFSYSGATRDMEDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLCGYNESPLQSGS 294 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 I+A Q ++ D LF + Sbjct: 295 IAARMGQMLIIDCLFHGFCLK 315 >UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W838_ATOPD Length = 304 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 2/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 LR+ + + + +++ + DY+L P+ S +LA + S S+VV+ +KLG Sbjct: 3 GVRLRLEEYRKNASSAERDIIDYILSDPEAVVGQSIHKLAAQTYTSASTVVRLCKKLGCG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + AL LA +S + + I D ++ EK+ +N +++ T+ + + Sbjct: 63 GYKEFQQALIYELAVSNKSNDIAVGGVI-AGDTTDVIIEKVTAKNISSLELTMQLLDAQV 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V+++ A I L G+GAS LVA++ KLM++ N D H+ L + S +D Sbjct: 122 VDSVVSLMMQAHSICLFGMGASLLVARDLQLKLMRLNINCNLSDDYHSQLLYAKNMSRED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNSA 240 L + +SY+G+ RE A G KV++IT + L R+ + L E S Sbjct: 182 LAIVVSYSGLTREAIECAWIAKANGAKVISITRGGIDSELIHRSDYVLGVAETEHIMRSG 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 ++S+ AQ + D LF A + ++ E + +R Sbjct: 242 AMSSRIAQLNVVDALFAAYVNRNYEKSVKRFST 274 >UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMQ5_CLOPH Length = 285 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++ R L S++K+A Y L + + +LA E+GVSQ + ++F + +G+ Sbjct: 3 NIEIKTRSIMDSLNNSERKVATYFLNNIENIFSIPIARLAEESGVSQVTWIRFCKAIGFD 62 Query: 62 GFPALKLALSEALASQPESP-SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK +L L S + I+ L + + A+ T+ + + Sbjct: 63 GLKDLKKSLFMELNSSTSEGIDTSDFSDIKKHSTLEQMCNTIRNTTLQAVEDTIKLIDYD 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L A I L G+GAS LVA +F KL++I N DMH L + P+ Sbjct: 123 TLKKVVSILSKASCIKLFGVGASALVADDFCKKLLRINKNVNFSYDMHTQLVYGANARPE 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G +E+ D + + IT +T + L A + +Y A E S Sbjct: 183 DVAVIFSYSGTTKEMLEIMDLAKKSNCPTIVITKYTKSPLVASADYSIYISAPEINYRSG 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++S+ AQ + DLLF +L ++ + + S + Sbjct: 243 AMSSRIAQLTIVDLLFTSLANKNYTSVEKYLEKSSEV 279 >UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=Gammaproteobacteria RepID=A0KFB6_AERHH Length = 286 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 101/284 (35%), Positives = 155/284 (54%), Gaps = 4/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +I L+ S+ K+ADY+L P+ H SSQ+LA +A VSQSS+VKF QK+G+ Sbjct: 1 MLTLSKISNIRSQLSPSELKIADYILACPEQVTHFSSQELAQQADVSQSSIVKFTQKIGF 60 Query: 61 KGFPALKLALSEALASQ---PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGF A KLA+SE L + ++N I DD L + +KL +E ++ T Sbjct: 61 KGFTAFKLAVSEDLGRKHAIKTDNVGDLYNGIGRDDDLETMAKKLAQEKINSIVETTQAL 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 L + ++ A R+ L GIG S L A++ +KL+KIG +D H ++ Q Sbjct: 121 DNATLARVLDVINQAGRVQLVGIGGSALTAKDLWYKLLKIGVTTLFAQDSHVQISIAQTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 P D+ L +SY+G R++ AA+ R G ++A+T F L+Q A L T+A+E Sbjct: 181 GPGDVQLVVSYSGASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENEL 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +SIS+ AQ +TD+LF+ L+Q+ + A I + + +L Sbjct: 241 RISSISSRTAQNTITDILFLGLVQRR-DEAWALIDGTRGAIDRL 283 >UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium RepID=C3WE65_FUSMR Length = 284 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 151/265 (56%), Gaps = 1/265 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++I ++ ++KK+ +Y+L PD + L++ +LAN SQ++VV+FA++LG+ Sbjct: 1 MGVLIKINSMLDNISSTEKKVGEYILENPDKIKDLNTYELANITKTSQATVVRFAKRLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPI-HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGFPA KLALS+ L ++ V I H +I+ DD ++G K+ EN A+ T V Sbjct: 61 KGFPAFKLALSQDLGNRKAESHVNIMHEEIKPDDSFEIIGRKISNENITAISDTYEVTDF 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V ML AR+I+L GIG SG+VA++F +KL+++G +A D H L+ + Sbjct: 121 TELEKAVVMLSKARKIMLAGIGFSGIVAKDFYYKLLELGKHAMIEVDTHMQLSCLSTMGE 180 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+L IS++G E+ G V+A+T PN ++ A L T+ S Sbjct: 181 DDVLFVISHSGKTMEMYNVVKVAKSKGITVIAMTSIAPNPIKDLADIRLNTVEMNSNFRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 ++S +Q + D+L++ ++ ++ Sbjct: 241 TALSPRISQLTVIDMLYVKMMLENK 265 >UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=Firmicutes RepID=A6LVH8_CLOB8 Length = 282 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y GL+ ++ +ADY+L P + H S L++E V+ S++ +FA+KLGY Sbjct: 4 SVRLKIKSLYNGLSAKEQNIADYILENPISVAHNSISYLSDELNVADSTLFQFAKKLGYS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ L + + IH +I DD + +K+ N + T + + Sbjct: 64 GFKEFKMAI---LIEENNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILGLDD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + ++ ++ + G+G SG++A++ K ++ + D H L +P D Sbjct: 121 LKKAAEIISNSNLLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLTPQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG +E A+ + G KV+ IT + L + +I+EE +S + Sbjct: 181 CAICISHTGKSKETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFISISEEIEFHSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ +Q + D L++ L+ + E + E + + Sbjct: 241 LSSRISQLSILDSLYVILMFMNKEKSKEALSKVRRTI 277 >UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AZQ1_ENTCA Length = 283 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y+ L+ ++ +ADY+L P H S L+NE G++ S+ +F +KLGY Sbjct: 4 SIRLQIKTLYKDLSLKEQAIADYILENPSKVSHSSISDLSNELGIADSTFFQFTKKLGYN 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ L + + ++ IH I+ D + +K+ N + T N+ EE Sbjct: 64 GFKDFKMAM---LMQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLKEED 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L M+ ++R+ G+G S +VA + K ++ D H L +PDD Sbjct: 121 LKLAAAMINQSKRLFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLTPDD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG RE A G K++ IT + L + +I+EE S + Sbjct: 181 CGIFISHTGKSRETIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +++ AQ + D L++ L+ + + A + I + K+ Sbjct: 241 LASRIAQLSIMDSLYVILMFINRDKAQQSIAKIRRSISKI 280 >UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=Clostridium RepID=A6LUR0_CLOB8 Length = 281 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 73/282 (25%), Positives = 139/282 (49%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y +K +ADYL+ + +S++ +A S +VV+FA+K+G+ Sbjct: 1 MNVLQYIKQNYDSFTDREKLIADYLIETKERIISMSARDIAEATKTSAPTVVRFAKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 LKL LS ++ + E+ ++ + D + + + + + M T+++ EE Sbjct: 61 NTLNELKLKLSINISKEEEAGAIQFQY-LDNDLGTKNIIYGIKQSVDSIMEQTVSLLDEE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +L SA+ I + +G SGLV Q+F +KL ++ D H + + Sbjct: 120 CLDKAIELLISAKNIYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTHLQITSSVLLEEG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATNS 239 D+ LAISY+G +E+ V+AIT N + + + A E++ Sbjct: 180 DVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKSIRE 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q + D+L+I +I+ +++ E++ + VK+L Sbjct: 240 GAISSRISQLAIIDMLYIGMIRNNIKEVEEKLISTRKAVKEL 281 >UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALE3_SEBTE Length = 282 Score = 269 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 136/278 (48%), Gaps = 2/278 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I + S+ K+ +Y+ P++ ++ ++L+N ++++++F +K G+K Sbjct: 7 NLFNKINSLKKSFTASETKVFNYIEKNPESVVRMNIRELSNAIDTGETTIIRFCKKTGFK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K++L +L+ + +S I I D+ + E + + + TL++ + E Sbjct: 67 GYNDFKISLISSLSKEKQSNKYKI--DILADENYNSIAEGIYNNSFNVLKDTLSLINNEI 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +C+ ++ +A+ I GIG S L AQ+ +K ++IG + A+ D H S +D Sbjct: 125 LDKCINLINNAKHIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPHLFKMAASISDRED 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS TG RE+ + G K +AIT + + A + L E+ + S Sbjct: 185 VIIGISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVLLNGFNEELLETGS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S +Q + +LL++ ++ ++ + A E + V Sbjct: 245 FSERISQLFIIELLYLGVLSKNKDKAMELKDLTIKAVT 282 >UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQA6_9CLOT Length = 290 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 131/278 (47%), Gaps = 4/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI+ Y L+ + KK+AD+++ PD A H++ QLA VS++SVV+F Q L Y Sbjct: 12 MGCTERIQATYSALSGASKKIADFVIDHPDQAVHMTVVQLAESCEVSEASVVRFCQCLQY 71 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF KL+L+ + S I I +D + EK+ A+ TL + + + Sbjct: 72 AGFYEFKLSLAAEIV----PASQMIQEDITVEDTEPTILEKVFAGEQQALQETLQMLNRQ 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 V + + ++ G + +AQ+ ++L++ G ++ D + L Sbjct: 128 DFISAVNHIAFSNKVEFFSCGNARPIAQDAHYRLLRTGIDSRIGIDDYDCLIHASMLRTG 187 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G + +E + G + ITG + + + C+ + ++E S Sbjct: 188 DVAIGISHSGSTKNTIKMLEEAKKNGATTICITGMEKAPITRVSDICMVSHSKETMFRSM 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++ AQ + D L +A+ + E + + + ++ ++ Sbjct: 248 AMASRIAQMAIIDALVVAVSFKRFERSKQYLTLTDKIL 285 >UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n=3 Tax=Vibrionales RepID=A5L3V2_9GAMM Length = 282 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 161/281 (57%), Gaps = 1/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M G+ +++ L+ SD +A Y+L P + LSS +LA GVSQS++VKF+QK+GY Sbjct: 1 MKGIAKVKALLPKLSPSDSLVARYVLDHPQQVKQLSSPELAKAVGVSQSTIVKFSQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF +K+ L ++ S IH I D V EKL+ T ++ T+ +N E Sbjct: 61 KGFSEMKVKLYQSDMSYQPVSQRGIHGTITRKDSPDTVMEKLLASKTQSLERTVLLNEGE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L +L A +I ++G+GAS LVA++FA+KLMKIG A D H +A + + + Sbjct: 121 QLSNAADLLHLANKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPDAHIQIANAASLTEN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+AISY+G RE+ A KV+ I+ +P+AL + A L + A+E S+ Sbjct: 181 DVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKLISAADENHIRSS 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI+A +Q +TDLLFIAL QQ E A + I S++ V + Sbjct: 241 SITARDSQFYITDLLFIALTQQ-EEQADQLIEQSKSAVAEF 280 >UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=D1YCB1_PROAC Length = 290 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI + ++ ++A +L +PD S+ QLA AGVS ++VV+F + LG Sbjct: 4 SLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMS 63 Query: 62 GFPALKLALSEALASQPESPSVP--IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ L+ L+ L+ + I DD L + K+ + T Sbjct: 64 GYRELRTELARDLSRRTLELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDA 123 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + + A R L G+G+SGLVA + + KL +IG +D H L Sbjct: 124 DELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKR 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L IS++G +E+ A + G +A+TG + + + A H L T A E + Sbjct: 184 PCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRA 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++S+ AQ + D LF + Q ++ + + V Sbjct: 244 GAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVS 283 >UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWE9_9CLOT Length = 301 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ ++ L++ + + A+Y+ + + S LA AG S+++V + KLGY+G Sbjct: 25 LYDRVEEKRGSLSKKELETAEYMAAHQEQLIYSSITDLAERAGSSEATVTRVCGKLGYRG 84 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK+ ++ L +P IH + D P ++ EK+ + T + + + Sbjct: 85 FQALKVGVAREL----TTPQEKIHENLEADSPAEVIIEKIFSSAIETLSMTQKSINVKAV 140 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARRII+ G G S +A + K +++ NA A D H + V + + D+ Sbjct: 141 AASIDALCRARRIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMTDQDV 200 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LLAISY+G R + AA + G V+++T + + + A CL T ++E + +I Sbjct: 201 LLAISYSGSSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTYSQETRYRTYAI 260 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S+ A+ + D ++ + + + A E + Sbjct: 261 SSRMAELTIIDTIYTGVALRLGDKAIANFEALERAL 296 >UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA31_9ACTN Length = 281 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 82/273 (30%), Positives = 141/273 (51%), Gaps = 2/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+R++Q + ++++L + +L P++ LS +LA A VS S++ + +KLG K Sbjct: 3 SLLVRLKQYRDNASPAERELIERILDDPESISGLSIHELAAYAFVSPSTITRLCKKLGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LA ES S I + D R EK+ ++N ++ +N E Sbjct: 63 GYKEFQHLLIYDLALLRESSSSKIE-DLAPTDTSRQTIEKVTRDNIDSLRLVEKLNDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 CV ++ AR I L G+GAS L A++ +KL++IG + + D H L S P+D Sbjct: 122 YEACVDLMSDARTINLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSGPED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNSA 240 L +AISY+G+ E+N+ GGKV+AITG + L ++A L + E SA Sbjct: 182 LSIAISYSGLTEEVNVCVGRARERGGKVIAITGSAFDSKLARQADEVLLVGSTEPLMRSA 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 ++++ Q + D+LF + + ++ E + Sbjct: 242 AMASRIGQLGVIDILFKSFVNRNYARFSEVLEQ 274 >UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDH7_9ACTO Length = 342 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 2/280 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L+R+R GL S++++A+ +L P L+ +LA S ++VV+F Q++GY Sbjct: 12 VLVRVRAALPGLRPSERRIAEAILDDPHATAGLTVAELAAACDTSTTTVVRFYQRIGYGR 71 Query: 63 FPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + L+L L+ + + I DD + + K+ T ++ T + + Sbjct: 72 YKDLRLDLTREATREQLETANLPAASGDIDRDDTIDDIIAKVAANETLSIADTAEILDRD 131 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L V + +ARR+ G+GASG V + KL +IG A + D A + Sbjct: 132 ALARAVDCVLNARRVDSFGVGASGFVGLDLQQKLTRIGRTALSWLDTDAAWSAAVTLDEQ 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + +AIS+TG G +AIT AL + A L T A E S Sbjct: 192 CVAIAISHTGTTAATVEFLAMAAAEGATTIAITNHDNTALAETADVVLTTAARETRFRSG 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + AQ M+ D LF + + + + +R + A V + Sbjct: 252 ALGSRIAQLMVVDCLFTGVARASYDASMSALRKTYAAVHR 291 >UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n=4 Tax=Firmicutes RepID=A8FIY5_BACP2 Length = 286 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 139/279 (49%), Gaps = 3/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR + L+ + KK+A+Y+L P S LA+E S++++ +F +K+GY+ Sbjct: 8 NIFSHIRTTFHSLSPTQKKIANYILENPQKVVLHSISALASECNTSETTIFRFLRKIGYE 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + ++ +++ +A+ I+ +I D + + K+I+ T ++ ++ + Sbjct: 68 SYQVFRVHVAQDIATNT---PQSIYGEIEASDSVADIKHKVIELTTNSIQDMKHIVEDHA 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ A + + G GAS +A + K +++GF+ + D H + ++ D Sbjct: 125 VTQFIEQMKQAHKTVFFGAGASSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHATEHD 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++AIS++G RE+ A G K+ +IT + + L +R+ L + + E S S Sbjct: 185 FIVAISHSGESREILDAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYRSDS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q ++ D+L++A + + A E ++ S V K Sbjct: 245 MISRINQLVIIDVLYVAAVLELGSNAIENVKRSRLAVAK 283 >UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU Length = 291 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 3/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + S+K +A Y+L + +LS ++LA + S +++V+ +KLG Sbjct: 1 MSIMTQLEFELD-FSSSEKTIAKYILDNGEDILNLSVKELAKQTYTSPATIVRLCRKLGL 59 Query: 61 KGFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ S L + V ++ D + ++ + A+ TLN+ Sbjct: 60 NGYGDFKIKYSAELQFDKKNKKRVDVNFPFGNTDSNSQIAYRIANLHQEAIEDTLNLVDF 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L ARRI L G G S L +F K+M+IG SP Sbjct: 120 KNLDKIINLLDQARRIYLFGNGNSLLAGFDFQHKMMRIGKMVEMRAHAGEQGFLSYTCSP 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 DD+ + ISY+G E+ A + ++ +L IT N L + ++ + T + E+ Sbjct: 180 DDVAILISYSGETNEMVELAKFLKKMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIFSK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A S+ + L DL+F + + + + + + L Sbjct: 240 IAPYSSKTSISYLLDLIFSCIFRLNYDHYINEKINRDKL 278 >UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZR0_ERYRH Length = 280 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 140/279 (50%), Gaps = 4/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ ++K++A+Y+L D + SSQ A E S +++V+F++K+GY Sbjct: 1 MSCIYRIKENMHTYTDTEKRIAEYILENKDEVVNFSSQHFAKEINSSAAAIVRFSKKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + + +S I+ +D + + K N T + + E Sbjct: 61 NGFTHLKVELARDHSEEEQS----FDKLIKEEDTIETMVRKSHYSNHRTFDNTYKLLNLE 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +ARRI L GIG SG+V Q+ K ++I + D H ++++ + + Sbjct: 117 VLDASIAAISNARRIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHITEN 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+SY+G RE+ +A G +AIT N L + + + EE Sbjct: 177 DVTIALSYSGQTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEVRLG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 SI++ + ++DLL++ + + ++E +I ++ +K Sbjct: 237 SIASRFSMLAISDLLYLGVAKNNIEETRRKIVNTRDTIK 275 >UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Tax=Gammaproteobacteria RepID=HEXR_ECOLI Length = 289 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 126/280 (45%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + + L++S++K+A+ +L PD A H S +A EA VS+ +V +F + + Sbjct: 1 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP KL L+++LA+ ++ + DD + K+ + A + + + Sbjct: 61 RGFPDFKLHLAQSLANGTPY----VNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A++I G+G+S VA + K + D+ + S Sbjct: 117 AINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDG 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS+TG + L A V+A+T L + A+ + E Sbjct: 177 DVVVLISHTGRTKNLVELAQLARENDAMVIALTSAG-TPLAREATLAITLDVPEDTDIYM 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + AQ + D+L + + ++ + +K+ Sbjct: 236 PMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKE 275 >UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=Q2G836_NOVAD Length = 296 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RIR ++++ K+A Y++ P +S LA S+ SV+ F + +G Sbjct: 19 NALTRIRSALPQMSKTAAKIAAYVVEHPADVVGMSITDLAALVDASEGSVINFCRSIGLG 78 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH + +D V K+ A+ +L+V + Sbjct: 79 GFQHLKLSLAQEIVQ----PVHFIHEDLEREDSTETVCRKVFHSGIQALRDSLSVLDPKA 134 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++R+ARR+ + GIG+S +A++ ++L++IG +A V D H + D Sbjct: 135 MAAAVDIIRAARRVEIYGIGSSAPIAEDAHYRLLRIGLDARVVIDSHVQAISASRCDKDV 194 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G + + IT F + +Q A L+T+A E + + Sbjct: 195 AVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYADVVLFTMARETRFRTEA 254 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D L AL D + + + ++ + ++ Sbjct: 255 MTSRIAQLCVIDALIAALALADYDRSTDVLKQTFDVLS 292 >UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C448 Length = 286 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 105/284 (36%), Positives = 162/284 (57%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I LA++ +K+A ++L P+ +LSSQQLA VSQS++VKF+QK+G Sbjct: 1 MTLLDIITYSLPRLAENQRKIAQFILENPENVLNLSSQQLAEILDVSQSAIVKFSQKVGV 60 Query: 61 KGFPALKLALSEALASQPES---PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KG+PALKLALSE + Q P +HN+I DD L +V +KL E ++ T + Sbjct: 61 KGYPALKLALSEIIGRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 ++ V + ++R+ + GIG SGL A++ ++KL KIG D H +A Sbjct: 121 DFKQFERIVERIDQSQRVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+ + IS+TG R+++ AA+ + G V+AIT + L Q A + L +IAEE Sbjct: 181 NTHDVQIVISFTGRRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+Q+ A + ++ ++ KL Sbjct: 241 RSSSISSRTAQNTLTDLIFMALLQRREAKAKSLVMNARVVINKL 284 >UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseriaceae RepID=D0W145_NEICI Length = 315 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A + VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLADLSGAERKVAECALAKPKWFVHAAVAEIAEHSSVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIG---HEGMPYVHEELNADDDMSSVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S +D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSSEDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G ++A+T + L Q A L +E A + Sbjct: 178 LIAISNTGSSIELLDAVSIAKENGASIIALTRN-ESPLAQMADCVLSIATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + Q + D+L I L + + A +++ S+ Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKAY 272 >UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator n=24 Tax=Neisseria RepID=A9M040_NEIM0 Length = 282 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 4/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A A VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIG---HEGMPYVHEELNADDDMASVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G V+A+T + L Q A L +E A + Sbjct: 178 LVAISNTGSSIELLDAVSIAKENGASVIALTRN-DSPLAQLADCVLSVATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + Q + D+L I L + + A +++ S+ + Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIH 273 >UniRef50_Q184N2 Putative phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q184N2_CLOD6 Length = 283 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 150/281 (53%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L+++Q Y+ L + DKK+ADY+L + LS +LA+ + S +S+V+F++K+GY Sbjct: 1 MSCILKLKQIYEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ L + + + D + V K+ +N + T +N ++ Sbjct: 61 SGFGDLKIEIAKDLMGKENEYT---YVDENYDCNIDSVINKITNKNIETINQTRLLNEKD 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E V + A+ + + G+G S LVA + KL++I A D H L + Sbjct: 118 IIKEAVEQIIKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKE 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G +E+ + + G KV+ IT ++ N L + + L E+ Sbjct: 178 DIAIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRLREG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A L D+++I++IQ++L A ++++ ++ ++ L Sbjct: 238 AISSRIAMLTLIDIIYISIIQENLNEAEQKLQETKRILDYL 278 >UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=Burkholderiaceae RepID=Q3JNN8_BURP1 Length = 339 Score = 262 bits (671), Expect = 8e-69, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L S++KLAD++L P LS +LA AG SQ ++ +F Q LG G Sbjct: 8 MLPRIETIRAQLRPSERKLADFVLAAPREVLDLSMTELAARAGASQPTIARFCQALGCSG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+ L++++A ++ + D+ + K+ A+ N S + Sbjct: 68 FREFKIRLAQSVA----PGVASVYRDVEPDERAPGIIGKVFDRTIGALIEVRNSLSATSV 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + +L A RI G G SG+ AQ+ K ++G + A D H + +D+ Sbjct: 124 AEAIELLTRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVAYSDPHTFSMSAALLGANDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS TG R++ AA L G KV++IT + L Q ++ L + E+ + + Sbjct: 184 VVAISNTGRTRDIVDAARAALACGAKVISITHS-HSPLAQLSTVSLASNVAEETDVFSPM 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + D+L + + + +R+ ++ + + Sbjct: 243 TSRMSHLAIGDILAVGVALRRGPELVDRLGRAKEAITR 280 >UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3D9_THELT Length = 276 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 135/283 (47%), Gaps = 13/283 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I+ + + + +LA +++ PD H+S ++ +E + Q +VV+F QKLG+ Sbjct: 4 DVQTIIKANQKQFTKKENELAQFVIDHPDEVIHMSITEIVDELRIGQGTVVRFCQKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN--SE 119 GF K+AL+++L Q E+ + + + + +++ A+ T + +E Sbjct: 64 GFHPFKIALAKSLGRQEEAS-----------EGSKDMLAMVKEDHIKAIEETSKLLKLNE 112 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++C + + RR+ L G+GASG+ A + +K M+IG + + D H ++ + Sbjct: 113 KVVYQCAEKISNCRRLYLLGVGASGVTALDAYYKFMRIGVDVKYMLDPHFQAMSLSGCNE 172 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++A S +G + A + V+A+TG+ + L A L T E S Sbjct: 173 KDCVVAFSQSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTFYADFVLLTAVRENPFQS 232 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +I + AQ + ++LF + A + + + V+K + Sbjct: 233 GAIRSKIAQLHVLEVLFEQTKLLLADKAKQNVDRTARSVEKWI 275 >UniRef50_P37767 Uncharacterized HTH-type transcriptional regulator yfhH n=149 Tax=Enterobacteriaceae RepID=YFHH_ECOLI Length = 282 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 282/282 (100%), Positives = 282/282 (100%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY Sbjct: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE Sbjct: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD Sbjct: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA Sbjct: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV Sbjct: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 >UniRef50_B9K581 Transcriptional repressor of rpiB expression; transcriptional repressor of ribose catabolism (RpiR/YebK family) n=3 Tax=Proteobacteria RepID=B9K581_AGRVS Length = 291 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 4/274 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR L + K+ D + D + S +Q+A AGVS++ VVK +KLG+ GF Sbjct: 14 RIRMMMPMLTPLEAKVVDTVFGMRDFSEETSLKQIAENAGVSEAMVVKITKKLGFSGFRD 73 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + ++S+ P+ +H ++ DD + +K+ + + A+ TL + + Sbjct: 74 FRSSVSQY----NRQPTTEMHQELSVDDTSLEIVQKVFRTSIHALEETLAILDMAAFDQA 129 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 M+ AR G+G S +A++ A K ++IG A+ D H +L + + D+ + Sbjct: 130 ADMIHKARNRDFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDVAIG 189 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S++G + A + G +A+T + +AL Q A L + A+ + +A Sbjct: 190 FSHSGNTIAVIEALQLARKNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGENAAAR 249 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AQ + D +F+A+ Q+D + A + + + V Sbjct: 250 IAQLNILDAIFVAVAQRDYQAAERNLDRTMSAVT 283 >UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=Bacteria RepID=D1AUV3_STRM9 Length = 272 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 126/268 (47%), Gaps = 11/268 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+ Y ++ + K+ADY++ + D + ++ + VS++++V+F +K+G+ Sbjct: 1 MKYITLIQSFYPSFSKQEIKVADYVIKEKDAICFMPLHEITKKINVSEATIVRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF KL ++ +A+ + + H E + + T N+ ++E Sbjct: 61 KGFIDFKLEVAREIATIEDERNTKEHY-----------IENIEYNIIETIKNTKNLINKE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + +++++ + G+GASG+ A F + M+ G +V D H + ++ Sbjct: 110 DVENAIEAIENSKKLYVFGMGASGVAALEFQNRFMRFGKIGHSVSDGHFQVMYASTTTEK 169 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +L G K++AIT + + + + + + T +E N Sbjct: 170 DVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPIAKLSDIVILTSGKETLLNGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAP 268 ++ + +Q + D+L ++ + A Sbjct: 230 ALVSKMSQLYIIDVLATGYALRNSKKAK 257 >UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EAC5_9ACTN Length = 283 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 2/260 (0%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + +++ + Y+ P LS + LA+ S SS+++F ++LG+ G+ + L L Sbjct: 17 SPAERNVIAYVSAHPHEVVGLSVRGLADVTFSSPSSILRFCKRLGFAGYKEFQRELIAEL 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 A + V + I DD + + K++K N + AT L C L+ AR Sbjct: 77 ALLGDKKDVALE-DISMDDSVERIVGKVMKSNVRTIEATARTLDYTVLERCAARLKRARA 135 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + L GIGAS LVA + A KLM++ D H L + D+ +A SY+G+ +E Sbjct: 136 VNLFGIGASRLVAHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGLTQE 195 Query: 195 LNLAADEMLRVGGKVLAITG-FTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + E R V+A+T + L A L A E S ++++ AQ M+ D Sbjct: 196 VLDCTAEAQRHNCPVVAVTKVDGSSKLATMADAVLGVAASEPLVRSGAMASRMAQLMVVD 255 Query: 254 LLFIALIQQDLELAPERIRH 273 L+ A + D E A I+ Sbjct: 256 ALYAAYVASDYERATHVIKQ 275 >UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=A1AYM0_PARDP Length = 287 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 135/275 (49%), Gaps = 4/275 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR + L + ++ D + + D + +Q++ +AGVS + VVK A+KLG+ GF Sbjct: 12 AQIRMKLPFLTPLEARVVDTITGRNDLDLTTALRQVSEDAGVSDAMVVKIAKKLGFNGFR 71 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL ++ +H++I +D + K+ + + A+ T+++ Sbjct: 72 DFREAL----VVYRQTDVASLHSEISPEDSSADIIRKVFQTSIQALEETMSIIDVSAFDR 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 T+L AR+ G+G S +A++ A K ++IG A D H +L + P+D+++ Sbjct: 128 AATLLHGARQRDFYGVGGSAQIARDVAHKFLRIGLRAGVQDDPHMMLMSAALLGPEDVVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S++G + AA + G +V+AIT + L + A L + A+ + +A Sbjct: 188 AFSHSGTTSNVIEAARLARQQGARVIAITNYATAPLSELADIALCSTAQGSPLLGENAAA 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AQ + D +F+A+ Q+DLE A ++ + V Sbjct: 248 RIAQLNIMDAIFVAVAQRDLERAEAQLARTRNAVD 282 >UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=Bacillales RepID=C4KZ09_EXISA Length = 301 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I + + +KK+ADY+L ++++++LA + VS++S+V+FA+ +G Sbjct: 22 SLLTKIDLAKEDMTAVEKKIADYILSHSTLIPNMTTKELAQKTDVSEASIVRFARVVGID 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F A KLAL + LA + + N ++ D +K+I N AA+ A + + Sbjct: 82 SFKAFKLALVKDLAVTETTLTD--FNVLQQKDTPYDSFQKVIHVNKAAIEACAEAMDKRE 139 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+I G+G S A + +K K+G+ A D H +L+ + D Sbjct: 140 LEHAVDLFARASRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPHLGKSD 199 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS +G +++ + V+AIT + L + A L T E AS Sbjct: 200 VFVAISTSGRTKDVLELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPNVESDFRIAS 259 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ Q + D L++ L+ + E +R + + KL Sbjct: 260 IASRMTQLTIIDTLYMGLLHRKGEGLIDRYAEARDEMVKL 299 >UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C511 Length = 286 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 138/279 (49%), Gaps = 5/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +RI++ ++K +A+Y+L S+Q L + S +++++F++K+G+ Sbjct: 9 MNAYIRIKEYNDSYTATEKLIAEYILEN--DILQDSAQALGEKTNTSAAAIIRFSKKIGF 66 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK+ L+++ + + I +D + + EK + N + T + + + Sbjct: 67 KGFSDLKMNLAQSTKEEKQQEVDLI---FEPEDNISTLVEKGCRLNMNTVLKTYQLINID 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E + +L +A I L G+G S ++ + KLM+IG D+H + Q+ + Sbjct: 124 TLEESIDLLNNASTIYLFGVGGSSVIGLDIYQKLMRIGKKVIYNADLHVQMTFAQSMDQN 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G L A + V++IT N + + +++ L +EE+A Sbjct: 184 DAALIISYSGSTTGLVDVARVLHEKQIPVISITQINANPISKLSTYSLKVPSEEKALRIG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++S+ + ++TDLL+ + +++ E + + S+ V Sbjct: 244 AVSSRISSFVITDLLYYGVFKKNFEEHKKNLIDSKDNVS 282 >UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04DU1_OENOB Length = 282 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR Y+ L +K++ADY+L D+ + Q L+++ G+S +S+ +F + LGY Sbjct: 3 NVTETIRSYYEKLHPGEKRIADYILSHQDSVMDATIQSLSDKIGISTASISRFTRHLGYP 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +ALS + ++ S +I+ D + +KL AA+ AT + + Sbjct: 63 NFRDFLIALSAS----KKNSSSDFFTEIKQSDQSEQIVKKLFSAGIAALTATAANINMKD 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L S+ +I GIG S +VA N K ++ N + D + + +D Sbjct: 119 LDRVVDWLVSSNKIGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTSED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + IS++G ++ L +++ G K++AIT F + + + A L + +EE S Sbjct: 179 LGIVISHSGRNQDTLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEEVNFRQES 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + E + I ++++ Sbjct: 239 MSSLVAQITIIDTLFTLVGHRLNEQTDQVINSMRRVIEQ 277 >UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU Length = 312 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 126/282 (44%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + S+K +A Y+L ++S+ QLA S +++ + QKL Y Sbjct: 1 MSLLRKLEMAVD-FSTSEKLIATYILKNGPDVLNMSTSQLAKATYTSPATITRLCQKLEY 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ K+ALS L + + + D + + + ++ T+N Sbjct: 60 KGYNDFKIALSAQLQYTFDRNSETNPNFPFKKRDTIHTIKHSIATLAKDSINLTVNNIDN 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + ML A+ I + G+ +A +F +K+ +IG N ++ L S+ Sbjct: 120 DILAKIIIMLDQAKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQSNK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISY+G E+ AA+ + R ++AIT F + L + + L+ + E+ Sbjct: 180 DHCAILISYSGETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIYSK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + ++ D+++ L + + E ++ ++ Sbjct: 240 VSTFGSTISIHIMLDIIYSCLFARHYDENLELKLETDHIIDH 281 >UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9S0_9ACTN Length = 282 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 128/272 (47%), Gaps = 2/272 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+ +++ ++ S++++ Y+L +P+ ++ +LA VS +++ + +KL Sbjct: 5 SLLVLLKENKDRVSTSEQQIITYILKKPEAIVGVTIHELAQMTFVSAATISRLLRKLSLG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LAS S I I D + + K++++ ++ T +N+ + Sbjct: 65 GYKEFQQYLIYELASMKTSRQSSIE-DINPKDSTKQIMFKIMRKTIESITLTEKLNNPKT 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + C ++ +AR I + G+G+S L AQ+ +K ++ + D H L S D Sbjct: 124 IDSCAELIHNARHITIFGMGSSLLSAQDLQYKFLRANIDCTLSADWHMQLIAANNMSDGD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA-LQQRASHCLYTIAEEQATNSA 240 + +A SY+GV E GGKV+AIT + L + A LY + E S+ Sbjct: 184 VAIAFSYSGVTPETLRCVHAAQDHGGKVIAITRSVNSTELVRHADIVLYVASTEPLLRSS 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + ++ Q M+ D LF L+ + ++ I Sbjct: 244 AGTSRITQLMIVDTLFSTLVNKHYDVYATAIE 275 >UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=cellular organisms RepID=A9BXM8_DELAS Length = 323 Score = 259 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 9/281 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI LA +++++A +L P ++LA A VS+ +VV+F + +GY G Sbjct: 43 MLDRITASLPSLAPAEQRVARLVLADPRAFARQPVRELAERAHVSKPTVVRFCRSMGYDG 102 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 KL L+ +++ IH + DD V K++ AA N S + Sbjct: 103 LADFKLKLAGSVSEGVPF----IHRSVDTDDKTSDVMVKVVDNAVAAFLQYRNAASTTAI 158 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + + S RRI G G SG+VAQ+ K ++G + A D H + + Sbjct: 159 EQAAQAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLG 218 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D + IS +G R+L AAD + G +AIT + L L E Sbjct: 219 PGDCAVIISNSGRTRDLMDAADIARKNGATTIAITASG-SPLASACHIHLAADHPEGYDR 277 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + + ++ D+L + + + + ++ Sbjct: 278 YSPMVSRLLHLLVIDVLATCVALRIGPALQPALEQMKNNLR 318 >UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I531_9CLOT Length = 284 Score = 259 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 135/272 (49%), Gaps = 1/272 (0%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L +++ K+ DY+ +++ +++ ++AN GV +++V +F +KLG++ F K+ + Sbjct: 9 RSELTKAENKICDYIEEYMNSSIYMTVTEIANNCGVGEATVTRFCRKLGFRSFLEFKMTM 68 Query: 71 SEALASQPESPSVPIHNQI-RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 ++ + I +++ +D L +K + N ++ TL + E +L Sbjct: 69 AQEFKNSGYDNEDIIESEVVSENDSLGEFVKKFYEINVNSLEETLKKIDYSMIEEISDIL 128 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 A+RI TG+G SG++A++ +K MKIG RD H L+ D+L IS + Sbjct: 129 VKAKRISFTGVGHSGIIAEDAYYKFMKIGLICNCYRDSHTLVMMASLMKEGDVLFIISNS 188 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E+N+AA+ KV++IT + L + + + L +E + S +Q Sbjct: 189 GNTEEINIAAEIARENNVKVISITENLLSKLARVSDYVLNYTDQEIKIDMESFGIRISQN 248 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L DL+ +I+++ E+A +E ++KL Sbjct: 249 FLIDLICTNVIRKNKEIAVVSKSKTEKAIEKL 280 >UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment) n=3 Tax=Lactobacillus RepID=C2D3P4_LACBR Length = 281 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 3/273 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 ++Q + L++++KK+A Y++ P A + + LA S +SV + + LGY F Sbjct: 8 LKQSFDNLSRTNKKIAKYVIDNPQAASEANIEDLAAVTETSTASVSRLVKTLGYSNFREF 67 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 L+L+ +Q ++PI I +D L + +K+ + A+ T E + V Sbjct: 68 TLSLA---YTQLRPQNLPIFKDIDANDTLSTIADKIFTSSQRALQDTREGIDENEFARSV 124 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + RR+ G+G S + A + K ++ + D L DD + + Sbjct: 125 LRIIHCRRLGFFGLGGSSVAALDGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDDCAIVV 184 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G R+ A+ + R V+AIT + + L + + ++E S + + Sbjct: 185 SHSGKNRQTIKIAETLKRRKVPVIAITSYQDSPLVGHSDITFISSSDESNYRSEGMYSLL 244 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AQ + D LF+ + + IR + +++ Sbjct: 245 AQLTIIDTLFMMATVRMGPATEDTIRSVQNIIE 277 >UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Gammaproteobacteria RepID=B8KWX3_9GAMM Length = 337 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Q GL +S+ K+A +L PD A +S LA+ AGVS+ SV +F ++ G Sbjct: 52 NLLEDINQSLPGLNKSEVKVAQAILSDPDAATRMSIASLASRAGVSEPSVNRFCKRFGAS 111 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP KL L+ ++ S S + D + KL +A+ A Sbjct: 112 GFPDFKLRLATSMVSGVRYISRAVEF----SDDIDTYPGKLFDNAISALVAAKEQLPTGD 167 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L ARRI G+G S V ++ K + +D A S D Sbjct: 168 IARAVDFLAQARRIHFFGLGTSAAVTKDAEHKFFRFNVPVTNHQDPLMQRMLAAAGSVGD 227 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG R L A+ + V+++T + L Q + + E Sbjct: 228 VFFIISHTGRTRALVEVAELARQTEATVVSLTA-PQSPLAQESDCAITLTIGENTEEYLP 286 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ Q + D+L + + E + + +K Sbjct: 287 MTSRLVQLAVIDVLATGVTLRRGERFLPHLARIKDSLK 324 >UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus suis RepID=A4VXR0_STRSY Length = 275 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + L ++ KL DY+ ++ QLA+ AGVS +++ + ++K+GY Sbjct: 1 MN-RNILNHSIENLTPTENKLLDYIEENIHRIETMNIYQLADNAGVSTATISRISKKMGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ ++++ ++ D + + KLI T + T++ + E Sbjct: 60 SNFNKLKIEIAKS------KYDDLLNAHFTPSDSIDDISTKLIHSITISNQQTVSFLNLE 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L V +L+SA RI L G+GASG+V +F +KL +IG +D H +A + + Sbjct: 114 ELEAAVKLLQSASRIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAGNG 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + ISY+G+ +E+ G + ITG N L A E Sbjct: 174 DLAIGISYSGMTKEVVEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELRVG 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +I++ LTDLL++ALIQ + + ++ L + Sbjct: 234 AITSRSNSLFLTDLLYLALIQDHKQEITAILEQTKHLTE 272 >UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_LISW6 Length = 283 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI L S+KK+ +L P+ S +LA +A S ++VV+F + +G + Sbjct: 5 SIINRIEGILHDLPTSEKKIGQTVLANPEFTTTASIHKLAQKADASGAAVVRFCKSIGLQ 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP LK LS LA P + I ++ + +KL+ M T + E K Sbjct: 65 SFPELKRQLSLDLAQ----PQKIGYYDIEPNEDFHTITDKLVSNMMQTMNDTASQLDETK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L A I G+GAS LVA++ + K ++ G + A +D H L Sbjct: 121 VLTACDLLGDADTIYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGKRKS 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +AIS +G E+ D+ V+++T F N L+++A L T A E S Sbjct: 181 VFIAISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEIRST 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ ++ D+LF + ++I+ S + Sbjct: 241 ATSSRQAQLLVVDILFYYYASHHYDEMIQQIKQSREATNRF 281 >UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRD4_9DEIN Length = 264 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 6/265 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + + +++A Y+L D + + ++A+ AG S++SVV+F + LG++GF KLAL+ Sbjct: 1 MTPALERIAQYVLHNADQVIYQTVIEVADAAGSSEASVVRFCRDLGFQGFQDFKLALASD 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L + S I + + + + + T + + + L E V + AR Sbjct: 61 LVT-----SPVILPKQEKPTSAQSTADYVYNTARQVLDETRRLMNVDLLEEVVERILKAR 115 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 RI G+G +G AQ+FA KL ++G A A D H+ + P DL IS +G Sbjct: 116 RIDFYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSGSSI 175 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + A ++ G +A+T + + + A L T A E S+ A +Q ML D Sbjct: 176 DTVKALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPESPLTRGSMGAKISQLMLLD 235 Query: 254 LLFIALIQQDLELAPERIRHSEALV 278 LF + + A E + + A V Sbjct: 236 FLFTRTALRHPKGA-ELLSKTAAAV 259 >UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=A6UCC0_SINMW Length = 296 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L IR R L +SD+K+A+ +L P + + + A AGVSQ +V++F +G + Sbjct: 16 NILEVIRLRRADLRKSDRKVAELVLADPKRVINATIAEAAEWAGVSQPTVIRFCASIGCQ 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KL L+++LA + H+ I D V K+ ++ N + Sbjct: 76 GYQDFKLRLAQSLALGMSAT----HSVIDASDTPAQVSAKIFDYTITSLDWVRNHLDPVQ 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L A RI G GASG+VA++ K G A D H + V P D Sbjct: 132 VSRAIDALSKASRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLKPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS TG + A G +V+ I G L + L E Sbjct: 192 VAVVISNTGATLAIIETARRARESGCQVIGIVGS-DGPLVEFCDIVLMVETLENTNIYTP 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A + D+L ++ + + + ++ L Sbjct: 251 TISRIAALTVIDILSTSVALRRGAEHVDLFTGMKRNLRYL 290 >UniRef50_P26833 Uncharacterized HTH-type transcriptional regulator CPE0189 n=15 Tax=Clostridiales RepID=Y189_CLOPE Length = 279 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 143/278 (51%), Gaps = 2/278 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ +S+K L +Y+ D + S +A E+GV ++++ +F +KLG+ Sbjct: 1 MGILEQLENPKFKATKSEKTLIEYIKSDLDNIIYKSISIIAKESGVGEATITRFTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ L++ ++++ + + +H + D+ + K++K + + T+ + Sbjct: 61 NGFQDFKVTLAKEISNKKNTSIINLH--VHRDESVTETANKMLKSSINILEQTVKQIDLD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +C ++ +A+R+ GIG SG+ A + +K M+IGF V D H ++ ++ D Sbjct: 119 LMCKCRDLIMNAKRVYFIGIGYSGIAATDINYKFMRIGFTTVPVTDSHTMVIMSSITNDD 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +E+ + G K++ +T + N L++ + + L + E + Sbjct: 179 DVIVAISNSGTTKEVIKTVKQAKENGTKIITLTEDSDNPLRKLSDYELTYTSAETIFETG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SIS+ Q L DLL+ +I++ A E+ + + + Sbjct: 239 SISSKIPQIFLLDLLYTEVIKEMFSEAVEKKIKTTSAI 276 >UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus lactis RepID=Q02VU4_LACLS Length = 282 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 135/281 (48%), Gaps = 6/281 (2%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + RIR Y L++SD+ ++DYL+ D+A LS Q+ A + VS +++ +F++K+ Sbjct: 1 MSRTLISRIRSYYDNLSKSDQAISDYLIANIDSAAMLSIQEFAQKTQVSTATISRFSKKI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ F LKLA+ + + +++ D + + K N +++ +TLN+ S Sbjct: 61 GFNSFQELKLAI----HATDSTRDDEFFSELSPTDDYKEILTKNFNGNISSLNSTLNLIS 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L + + +L A G+G S VA K +++ + +D H + Sbjct: 117 NRQLDQTMEILLKANTCGFFGLGGSNAVALIAFHKFLRMPLHCVYHQDFHFQQMQAAKLT 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D IS+TG ++ + + G ++A+T F + L + A L +I+EE + Sbjct: 177 SEDCAFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAADVALISISEEISFR 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ +Q L D LF+ + +++ + ++ Sbjct: 237 PEAVASTVSQISLLDALFMMYGMKMKDVSEGTLSEIRKVIS 277 >UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG85_KOSOT Length = 275 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 140/277 (50%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++++ Y L++S++++A Y++ +PD H + +LA + S+++V + +KLG+ G Sbjct: 2 IIVQLKGIYDSLSESERRVAKYIIERPDDVIHYTITELAKFSHSSEATVYRLVKKLGFSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + K++L+ L+ E + + E++++EN + T+ V + L Sbjct: 62 YQSFKISLARELSIPQEVIEE------GSEGSYQNFVERIVQENISLAKETMAVLDLDAL 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ +ARR++ G+G S +VAQ+ ++ +GF++ D HA + + +D+ Sbjct: 116 KKAVELIINARRLVFFGVGRSAVVAQSGSFNFALLGFSSTHYIDPHAQVMVASGLTNEDV 175 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS+TG R+ + G K + IT + + + LYT A + + S Sbjct: 176 VVGISHTGTIRDTVKSVQVAHAAGAKTIVITSGINSPITEVGDVVLYTAA-GKPSTSEFT 234 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + ++ D+L+ ++ + E + E ++K Sbjct: 235 VSRIGEFLILDILYKTVVARMSERLSKHFDKLEEILK 271 >UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4M2_9CLOT Length = 282 Score = 256 bits (654), Expect = 8e-67, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 135/278 (48%), Gaps = 3/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y L+ S K +ADY+L PD + ++A VS+++V++F KL Y Sbjct: 5 IFSLIRTKYNTLSSSQKDVADYILTNPDKVMMNTLNEIAAACRVSETTVLRFLHKLNYNS 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ L++ L+ + +++ + D + +K+I +++ + + + Sbjct: 65 YQLFRINLTQELSKDNQET---VYDDVGFQDTEDEIIDKIIHSTVSSITDSRQIIDPASV 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V + ARRI++ G+GASG +AQ+ KL+K+G NA D H + + + Sbjct: 122 KAVVEKIAGARRIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQNTI 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ S++G RE+ A +V A+T + + L +A + L + + E S ++ Sbjct: 182 LILFSHSGESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLCSSSRETMFRSDAM 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ Q ++ D+L+++L+ + +I S V K Sbjct: 242 TSRIVQMVIIDILYVSLVIALGDGILPQIHSSRLAVAK 279 >UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YX9_LACSS Length = 280 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R Y ++ K++ADY+ + + L+ Q+ A GVS +++ +FA+ LG+ Sbjct: 5 IDSLLRSYYDNFSEKYKQIADYIFQESQFNQRLTIQEFAANCGVSTATISRFAKILGFDN 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F A K+AL E+ + P+ ++I +D + EK+ N+ A+ AT ++ +EE+L Sbjct: 65 FQAFKMAL-----LAKEANTSPLFHEINANDTFTTMAEKIFSSNSNALKATWSLLTEEQL 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ A + L G+GASG+VAQ+ K ++ +D H L + D Sbjct: 120 QKAVALINRAHLLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDYHLQLMQATKLTNQDC 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS++G ++ A + ++ IT F ++L + L +I+EE + ++ Sbjct: 180 AIIISHSGQNKDALELARILKERQVPLIVITSFGNSSLAKLGDITLLSISEETNYRAEAL 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A AQ L D LF+ + + + + + A + + Sbjct: 240 HALIAQISLIDSLFMMVAVNNGQETEQSFKEIRAEIDR 277 >UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C2H3_LISGR Length = 282 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 6/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI ++ L +S+KK+A+ +L P A S LA A S +++V+F + LG K Sbjct: 5 SILNRIETLFKDLPKSEKKVAEMVLQDPAFASASSIHSLAKRADTSAAAIVRFCKSLGLK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP K L L+ SP + D+ + +KL+ + T SE K Sbjct: 65 SFPDFKRQLYSELS----SPVASGYYDFEEDESFDGISQKLLANYFQTLNDTAGQISEAK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + L A I G+GAS LVAQ+ A K ++ G +D H L A Sbjct: 121 IRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGKQVVISQDEHVLAMAFAARKSG- 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + A+S +G + A++ + V+ +T F P+ L+ +A L T A E S Sbjct: 180 VFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSKLKAKADFLLETSRAPEAKFRST 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ + D+L+ + + + E+IR S + Sbjct: 240 ATSSKQAQFFIIDVLYYHYVSRHYDQMIEQIRESRQATDRF 280 >UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHI8_9LACT Length = 281 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 137/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +I+ ++D+ +A+++ + ++++L + S ++ V+F++K+GY Sbjct: 1 MSVLYKIKSSMSAFTETDRSIAEFVFVNRQVVLESNAKELGDMTKTSAAAWVRFSKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PA K+AL++ +Q + I + D L + +K T + T ++ Sbjct: 61 KGLPAFKVALAKE--TQSYTNEDDIETFLNPQDSLMGLLQKTENMLTQNIRETFSLLDYH 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + + A+ + L G+G S +V +F K+ +I N RD+H L+ + + Sbjct: 119 ALEKAIEFIHEAKTVFLLGVGGSSIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQLDKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNS 239 D++L ISY G +N A +G +++ +T + + L + L+ EE+ Sbjct: 179 DVVLVISYNGETESVNSIAKVAKTMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKEIRL 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SI++ ++ +TDLL+ + + D + + + + +K+ Sbjct: 239 GSITSRNSLLTITDLLYYGIAKTDFNVTKDLLVRTRQFIKE 279 >UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CKN4_PASMU Length = 286 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 110/283 (38%), Positives = 168/283 (59%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++++ Y L+ +++++AD++L P + SS+ LAN+ VSQS+++KF+QKLG Sbjct: 1 MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA 60 Query: 61 KGFPALKLALSEAL--ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F KLA+SEAL P V +H+ I D L + EKL E A+ +L++N+ Sbjct: 61 DKFSDFKLAISEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNA 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + V L A+RI L GIG S LVA++F +KL KIG D HA LA Q+ + Sbjct: 121 IPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+L IS++G RE+ LAA+ K++A+T T N L + A + LY++A+E Sbjct: 181 PQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SI++ AQ +TDLLF+ ++QQ E A + I S AL+ +L Sbjct: 241 SSSIASRTAQHAITDLLFMGILQQ-KEHANDLILESRALIGQL 282 >UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPL3_9FUSO Length = 285 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ Y L++ +K +ADY+L + + +L+ LA GV S++ F +KLG+K Sbjct: 5 NMKFTIKTIYNDLSKKEKLIADYILKNINKSTNLTIADLAENIGVVNSTIFSFTKKLGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + ++L + ++ +H +I +D + + EK+ N ++ T + ++ Sbjct: 65 GFREFR----DSLLRDQFNSNINVHEKISKNDSITSIIEKVFNSNIKSLEDTKKIAEKKS 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + G+G S ++A + K ++ D H L + +D Sbjct: 121 FSTALKILTQVDIVHFFGVGGSSVIAHDAYHKFLRSPLKCRFDSDFHLQLMQASLLTKND 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS++G+ +E AD K++ +T + + L ++A + AEE S + Sbjct: 181 CAFIISHSGMTKESIEIADIAKERKAKIIVLTSYPLSILAKKADITFISTAEEIEYRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D +FI ++ + + + K Sbjct: 241 LSSRIAQLSILDTIFILVMLNNPTKTQISLNKIRTTIAK 279 >UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JIB3_RHOER Length = 291 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RIR L+ ++ ++A+ + P A L+ LA A S ++VV+ A++LG++ Sbjct: 12 DLLARIRASLSSLSPAELRIAEIIEADPSLASTLTVNDLAERASTSTATVVRTAKRLGFE 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+LAL+ A++ ++P+ I D V KL + + + T + Sbjct: 72 GYPQLRLALA-AISGSGTENTIPLGVDIVAADSAGEVMAKLAEFESEQLKGTAQLTDPAA 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V+ +RSARR+ + GIGASG+VAQ+ KL +I N D A + + PDD Sbjct: 131 LEEVVSRIRSARRVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLDRDAAMVSASLLGPDD 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ R G AITG + L ++ H L T E SA+ Sbjct: 191 IAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHHVLLTAGREFGFRSAA 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ Q ++ D +F + A ++ S + Sbjct: 251 MASRTGQLLVVDTIFAMVAHSLP-SALSALQRSHDAI 286 >UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor) n=2 Tax=Bacillus RepID=Q9K6Z8_BACHD Length = 284 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 137/278 (49%), Gaps = 2/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I Q ++ K+A+Y+L P+ ++++QLA +A SQSS+V+F ++LG + Sbjct: 6 LLAKIEQELASFPAAETKVANYVLKHPELVPTMTTKQLAEQANASQSSIVRFCKRLGLES 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP LKLAL++ L + + + + DD ++ +K+ N A+ +E+ Sbjct: 66 FPKLKLALAKELTRKEAYINSA--SLLETDDSPPILFQKVSSLNQMALDMATKAMNEQAF 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V + A++I G+G S + +K M++GF++ A D H ++ + D+ Sbjct: 124 TEAVEQMVKAKKIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGDYHQMIPFITMMDEQDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ +S +G +E+ AD K++ IT + +AL ++A+ L E SI Sbjct: 184 VICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDIEVQQRIGSI 243 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +Q + D L++++ + + S ++ Sbjct: 244 ASRTSQLNVIDALYVSVFHRIGSDLLDAFDASRKKTEE 281 >UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EB66_BRASB Length = 270 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 4/271 (1%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L +++A+ + QP+ H S ++A VS+ ++V F +++G +GF LK+ Sbjct: 1 MLPELPPKARQIAELIAAQPEPFVHKSITEVAEACDVSEGTIVSFCRRVGVRGFQELKIM 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L+ L P I + D V + + + A++ T + S E L E +L Sbjct: 61 LARDLIE----PVRLIQEDLHRGDDPATVTDHIFAAHAASLQETRRLLSMEALAEATRLL 116 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 R A+RI + GIG+S +AQ+ +++L+++G A A+ D H + + P + +S++ Sbjct: 117 REAQRIEIYGIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTGPGVATVTVSHS 176 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E LA G + + IT + L LYT+A E ++S+ AQ Sbjct: 177 GSTVETVLATRLAQAAGARTIGITRLGKSPLAAHCEVLLYTVANETRYRPEAMSSRVAQL 236 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + D L D E + R++H+ ++ + Sbjct: 237 AIIDTLVSCCALTDTERSVGRLQHAARILSE 267 >UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=Burkholderia RepID=Q13K65_BURXL Length = 287 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 6/276 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + IR L +++K+AD +L D A S +LA A VS+ SV +F + +G Sbjct: 5 NLIPHIRSALANLRPAERKVADMVLSDVDFAMRASITELAQRAEVSEPSVTRFCRAIGAH 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G K+ L++++A S + DD ++ + +K+ + + Sbjct: 65 GLRDFKMQLAQSVAGGVPYAS----TAVARDDDVQTLMDKVGEAAIGGITHARGALDPAV 120 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L SARR+ G+G+ SGLVAQ+ A + +++ + A D H P Sbjct: 121 VESAIAALSSARRVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLMEPG 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ AIS++G E+N + G +A+T + L L + Sbjct: 181 DVAFAISHSGRSVEVNESIQIAKERGATTIALTNVG-SRLAWLVDIPLLLRVPSPIDPNT 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + D L I + + E++RH++A Sbjct: 240 PGVSRLVHLCIMDALAIGVALKAGPKTLEKMRHAKA 275 >UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDH7_9FIRM Length = 281 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 122/277 (44%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++Q L +S + +A+YL+ A++LS LA E V++++V +F + LG++ Sbjct: 4 NFWELLQQHQGDLTKSGRTVAEYLVQHAAEAQYLSISSLARECQVAEATVFRFCRALGFE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +++AL++A A+ + D + E A+ T N S + Sbjct: 64 GYHEMRIALAQANATGVLVNQ----QEPAPDADTATLCEHASALFMTAINGTQNALSPQA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L SAR++ G G S A+ + I AV D H + + D Sbjct: 120 VDQAVALLHSARQVFCMGQGGSMAAAKEICARFACITNKFRAVADSHMQVMAASLMTEQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L +SY+G R+L G K++ IT + + + A L A+E +S S Sbjct: 180 VVLFVSYSGATRDLMETLRTAKANGAKIILITHYEDSPGAKLADIVLLCGAQESPLDSGS 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I A + ++L + I D + E + + Sbjct: 240 IPIKVAVLYVAEVLVLRYILDDKPGSTEAQERTTEAL 276 >UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax=Enterobacteriaceae RepID=MURR_SALAR Length = 287 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 95/284 (33%), Positives = 157/284 (55%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++R ++++K+A +LL + +SS+ +A + +SQSS+VKFAQKLG Sbjct: 1 MLYLAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGA 60 Query: 61 KGFPALKLALSEA---LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 GF L++AL E + +V +H+ I +D L ++ KL +E A+ T N+ Sbjct: 61 NGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLM 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E+L + + ++ A I +TG+G S LV ++ ++KLMKIGF A D H QA Sbjct: 121 DYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQAL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A + L T++ E Sbjct: 181 RQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLADYTLDTVSGETEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+S+S AQ +TDLLF+ ++Q + + I S L+ L Sbjct: 241 RSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIERSSELITLL 284 >UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEV7_ACHLI Length = 281 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 134/281 (47%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L + + + L+ +++ + DYL+ + S +++A A S +SVV+ +KLGY Sbjct: 1 MSVMLNMLKNKEALSMAERIVLDYLIENKTLLKDFSVEKIAEAAYTSPASVVRMCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ A + + + I D G+K I+ N A+ T+N+ E+ Sbjct: 61 NGFKDFKIDFILANSKVEIPETSEYTDVILIKDQNN--GKKAIENNIRALEETINLYDEK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +++ +AR+I++ G G+S LV ++ KL +I A + H + Sbjct: 119 TYTKAASLIMNARKILIFGKGSSFLVCKDLEMKLRRINKFCVAQGESHDQFVDASFINNK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ +A +++IT + L + LYT A E SA Sbjct: 179 DVVIFISNSGKTKEIISSALLAKENKTPIISITRIGSSILADISDVVLYTSALESEFRSA 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ +Q + D L+ D++ + + + + +KK Sbjct: 239 AMTSRISQMSVVDALYAKCAYTDIDRSIQALETTYRTIKKF 279 >UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales RepID=C6JFM8_9FIRM Length = 285 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 1/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I ++Y L +S KKLADY+ ++LS LA VS++++ +F + LG Sbjct: 4 SILDSITEQYHSLTKSGKKLADYVFSHTTETQYLSITSLAENCKVSEATITRFCRGLGLS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A KLAL++A + S + +D + + K+ N ++ + + EE+ Sbjct: 64 GYNAFKLALAQADRTTDLGDSSNSAEPVSSEDSISTICAKVHAANLLSLNESYALYDEEE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + +++L S+RRI G G S ++A + N + D H + + + D Sbjct: 124 MSKAISILSSSRRIYCFGQGGSMIMAMEAWARFSTASPNFVHICDSHMQASAIAMADSKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L SY+G R++ V+ IT F +A + AS L E S S Sbjct: 184 AILFFSYSGSTRDMCDTLQIASSRHVPVILITHFPKSAGAEFASVVLQCGYNESPLQSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV-KKLV 282 ++A Q L D LF Q + + + KL+ Sbjct: 244 VAAKVGQLFLIDCLFYGYCSQKPDTCSAARSATAHAIANKLL 285 >UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=Bifidobacterium RepID=B7GUA9_BIFLI Length = 289 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 108/278 (38%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 RI Y L +++ +A Y+ + A L+ Q+A+ A VSQ +V++FA+KLG+ Sbjct: 6 GIRERIDHVYPSLRPAERAVAQYIRDHIEEAADLTVGQMADIAHVSQPTVIRFARKLGFG 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ L A + + + D + K A + + + Sbjct: 66 GYRELRYVLRHPAAEHKVTFNPLDGFDLNPWDGEDEIPSKAADGAKALIDELHSALDPKA 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V +L + I + G+ S A + KL +G D + + Sbjct: 126 YRKAVALLAESEFIDIFGVENSLTPAMDLFTKLGYLGLTCRLNTDAYLQQIGAGHLTHGA 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A S++G + A G K +AIT L A L T + + Sbjct: 186 VAVAFSHSGSSADTVKALRLAKSHGAKTIAITNAIGAPLASWADVTLLTGRDSHTIYGNA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I +C A L D+L++ +I D + S +++ Sbjct: 246 IFSCVADTALVDMLYMGVILSDYGRFSTALDESGRMIR 283 >UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=Gammaproteobacteria RepID=C4L7F8_TOLAT Length = 292 Score = 252 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 140/277 (50%), Gaps = 4/277 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR GL+ +++++A++LL + + S + +A + VS+ +VK ++KLG+ GF Sbjct: 13 AKIRMALPGLSNTERQIAEWLLAKGNVESKTSIKSVAEQLEVSEPLIVKLSKKLGFAGFR 72 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+ AL E L+ S + +I D + V K+ + AM +V + Sbjct: 73 ELRQALVEYLS----SLPIDSEQEIEPTDSVESVLNKVFANSIQAMKEARSVADPILIAN 128 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ +A+ +++ G+G S V Q+F KL++IG + A D H +L +D+++ Sbjct: 129 AAQLIFNAKNVVIFGVGGSAAVCQDFEHKLLRIGILSRAYSDFHMMLMVSSQLDENDVIV 188 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G REL A + + +V+ IT +AL Q A + +++ A+ + A Sbjct: 189 VISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQLADYAIFSPAKGGILLGQNAVA 248 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q L D+LFIA++ QD + E++ +V+ L Sbjct: 249 RIVQLNLLDVLFIAILLQDHDKNREKLTRGSRVVRHL 285 >UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9G3_9ACTN Length = 285 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 131/280 (46%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I+ A+ ++ +A ++L +++ +LA++ GV+ S++ KFAQK+GYK Sbjct: 5 SVTAKIKSLLPSCAEKEQAIAQFILQHVRETSYMTIHELADKLGVADSTIFKFAQKMGYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + L ++ P V +H I D L + + + +++ TL + +E+ Sbjct: 65 GFRDFR----NDLLTEAYDPEVSVHEHITTRDSLATIAATIFHSSVTSLHNTLALLNEDN 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++++ +A + G G S +VA + K ++ + D H + D Sbjct: 121 LKRALSLINNAHTLTFFGCGGSNIVAADAYHKFLRSPLHCQNAIDEHIQIMQASLLGAQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G+ R A+ + ++ IT + + + A + +EE S S Sbjct: 181 VAIIISHSGLSRTTLQIAEILRENRVPIIFITSYLNTPITRFADVVFISASEETGYRSES 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKK 280 +++ AQ ++ D LF A++ + + + + + + + + Sbjct: 241 LASRVAQLVILDTLFCAVMFKSDDKNVAQTLHNIRSAINR 280 >UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulator TM_0326 n=7 Tax=Thermotogaceae RepID=Y326_THEMA Length = 280 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 143/282 (50%), Gaps = 5/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLG 59 M+ + RI+++Y ++KK+AD +L P S L+ +AGV S++SVVKF +KLG Sbjct: 1 MDVIQRIKEKYDEFTNAEKKIADTILSDPKGIIESSISDLSEKAGVKSEASVVKFYKKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ L+++++ +P ++ + +D + + EK+ K A+ TLN Sbjct: 61 LNSFQQFKVLLAQSIS---RAPLEIVYEDVSSEDDTKTITEKIFKATVRAILDTLNWLDI 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + V + ++A+RII G AS VA + K +IG N D H + A + +SP Sbjct: 118 DSIERTVDLFKNAQRIIFIGFAASAAVAFDAFHKFTRIGKNCLFSNDEHIIAAILATASP 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DLL+AIS+TG + A + + V+ ITG + L + + L T +E + Sbjct: 178 SDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETKIRT 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ Q ++ D ++ L +D A E + S V +L Sbjct: 238 DAMTSRIVQLVILDTIYTLLAARDP-RAIENLNKSRLAVSEL 278 >UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU66_9CLOT Length = 285 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+ IR Y L + +KK+ADY+L P ++ +L+N GV ++V +F + + Sbjct: 5 NLLISIRSCYDRLTRLEKKVADYVLQHPQEVVKMTINELSNSCGVGDTTVFRFCRSMNVG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL+ + S N + D L + +++ T A+ TL+ + Sbjct: 65 GYQDFKLALALSSNVNDMLDSKGEFNLAQSHD-LHELAQQVSGVFTDAVNETLSSLDYDA 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + +AR + L G G SG+ A ++M+I N D+H L + D Sbjct: 124 ISRTVEAILNARSVHLFGFGNSGVSALMMQNRMMRILPNIFYTSDVHMQLTSAATMQEDS 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +G+ ++ A G + IT F A L + A E S Sbjct: 184 VAIIFCNSGITKDSIRIAQMTHEAGAFTVFITKFMQTPAAPYADVLLCSGATEGPIQGGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS +Q + LL+ L ++ A E + + + Sbjct: 244 ISGVASQMYIVMLLYSELFRRMETRAQENKIKAAHAIAE 282 >UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteobacteria RepID=Q7MD38_VIBVY Length = 278 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 121/281 (43%), Gaps = 10/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+R+R + ++ + +ADY+L + + LA S+++VV+ + +GYK Sbjct: 6 NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ L+ I + + + ++ T + + Sbjct: 66 GYSDFRMALAVDLSQTESRQQNHIEGD---------ICDVSAQSAVDSLQDTAKLIDRKS 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A I G+GAS +V + A++L++IG A D H + SS D Sbjct: 117 LARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQGD 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L A+S +G +E+ AA + V+++T + L ++ L E + Sbjct: 177 LWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGPLTGGA 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++ +L D+L +L++ + ++ + +V L+ Sbjct: 237 FASKVGALLLVDVLVNSLLES-YPEYKDSVQETAEVVIPLM 276 >UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUN7_9ACTO Length = 294 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 1/261 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR L +++++A+ +L P + QLA + S ++V +F + LG G Sbjct: 4 IETRIRGLVPTLTPAEQRVAEQVLADPLGTHRGTIGQLAERSRTSLTTVTRFCRALGMAG 63 Query: 63 FPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+ AL+ ++ I DDP++ V L+ + A+ T + Sbjct: 64 YQELRFALATEAGEASSRDWTLGAAADIGPDDPMQSVLANLVATDVRALQETASQLDLAV 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + +ARR+ L + S V + +L ++G D+H LA+ P+D Sbjct: 124 AEQLVDAITTARRVDLYAVSGSAAVTNDLQRRLHQLGITCHLWIDVHDALASATLLGPED 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E+ G A+T F +A+ A L T A E S S Sbjct: 184 VAIGISHSGETIEVIEPLTAARDAGAVTAAVTNFPRSAITSVAGLLLTTSAREATYRSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 +S H Q ++ D L + Q+ Sbjct: 244 LSGRHTQLLVIDCLVTGVAQR 264 >UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=A0JVW9_ARTS2 Length = 309 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 124/283 (43%), Gaps = 8/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RI R L S +++A+ +L P+ A+ ++ +LA AGV +S+V +F ++LG Sbjct: 9 GLLHRISGRLPYLPPSLRQVAEAVLKSPEQAQTMTISELAVAAGVGESTVSRFVKELGID 68 Query: 62 GFPALKLALSEAL------ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 G+ ++ L L+EA S + S ++ + D + K+ + + ++ T Sbjct: 69 GYKSMLLGLAEATFISKAATSARTADSEVVYEGVNRGDTAAEIAGKVERSSVQSLRRTGQ 128 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 E + V ++ ++ +I + +G+S + A+ + + G RD + Sbjct: 129 RQDVEAIQRAVDLIDASNTVIFSCMGSSSIAAEEAVMRFTRAGKKCMLYRDTTIQVMLAA 188 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--E 233 P DLL+ IS +G + A + G +AITG + L+ A LYT Sbjct: 189 IIEPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLRNYADVVLYTATVPS 248 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S+++ Q ++ D+L+ + + E ++ + Sbjct: 249 GGELYGESVTSKWGQLLVIDILYATYASRHYDATVEHLKQTYQ 291 >UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=22 Tax=Enterococcus faecalis RepID=C2JLW7_ENTFA Length = 290 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 139/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L I+ R Q L +S++K+A+Y+L +T +++Q+LA +AG S +++++F + Sbjct: 12 NIVLSIQDRLQQLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSMDVN 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS L + ++ ++ + + +KL + + + Sbjct: 72 GFTELKLLLSANLGQMKQQ----MYTEVTKGESTADIKQKLQARFVHVVERSGQTLEDVA 127 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++E V +L I + G+GAS LVAQ+ K ++G D H + + ++ Sbjct: 128 VNEAVDLLEKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPS 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSA 240 + + IS +G +E + AD + G +++IT + + +++ L T + E SA Sbjct: 188 VFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQTSSGEDVPLRSA 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + AQ + D+LF A ++ + E+I+ S V++L Sbjct: 248 ATVSLVAQLYVVDVLFFAYAAKNYKETLEKIQISRKNVERL 288 >UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q61_LACBA Length = 286 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR Y L++++KK+A L P ++ ++LA+ GVS +++ +F +++ Y Sbjct: 4 STIGKIRGTYDQLSRTEKKVAQMALNTPAVVSEMTIKELASATGVSTATISRFVKRMDYA 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + +AL+ LA + ++ D L + K +++ AT SE+ Sbjct: 64 NYREFTMALAH-LAIEDGGEHQSSFPELAEGDSLATIANKTFHYTISSLEATNEALSEKD 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ G+G S + A + K ++ + D L S D Sbjct: 123 LARAVLKLINAEKVTFFGLGGSSIAALDGYHKFLRTALSVTYYPDFDIQLMQAARLSDQD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G E +E+ R ++AIT ++ + L Q A ++ +E S Sbjct: 183 CAVVISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAADVTFLSLTDEVNYRSEG 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + +Q + D LF+ + + + ++++ Sbjct: 243 MYSLISQLAILDTLFMMTVLRVSSRTGNVMTKVHDVIEQ 281 >UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH25_PETMO Length = 283 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 127/277 (45%), Gaps = 4/277 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLL-QPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 + R +S+KK+A+Y+L + + ++ +LA + G S++++ +F +K G++ F Sbjct: 8 LNSRMPTFTKSEKKVAEYILNSKKEDITRITITELATKCGTSEATIARFVKKAGFETFQD 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL L+ I I +D + + K+ + ++ +T ++ + Sbjct: 68 FKLTLALDNNEDIFEEEKDI--TIFKNDSPQEILRKVKLGSLKSIESTTSILDINNFLQA 125 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +RSA+RI + G+G+S VA+ +KL ++GF + A+ D H + + DL + Sbjct: 126 ANFIRSAKRIEIYGVGSSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATLNFGDLAIG 185 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G ++ + + + G +++T + + + + L + E +++ + Sbjct: 186 ISQSGSTKDTVDSLNVAKKHGATTISLTEHANSPITKYSDVVLEIFSGENPVKTSAGRSI 245 Query: 246 HAQGMLTDLLFIALIQQDLELAPER-IRHSEALVKKL 281 Q ++L L + E A + A+V KL Sbjct: 246 LVQIFAVEILSGLLYSIEYEKALTTGKDTARAVVNKL 282 >UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG49_SEBTE Length = 283 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 125/276 (45%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++++R+ + ++ A Y++ D LS +LA + S +++++ +K+G Sbjct: 1 MSLIIKLREA-KNFTPNEIGAAKYIISHSDEVIRLSCTELAKKTYTSPATIIRLCKKIGI 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ L+ + S + +N+I D + + +K+ + ++ T + + Sbjct: 60 GGYQEFKVILATEINFFIKNSMEINKNNEIDKKDSISDIIDKISSLSIDSLKETKILTDK 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + M+ +A + L G GAS VA + +K M+IG A + S+ Sbjct: 120 NVVKSVIDMINNAEILDLYGSGASHFVALDANYKFMRIGKVTATYALYDQQYVQAKNSNE 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + SY+G E+ A + K++ IT + N L++ A LY A+E S Sbjct: 180 NHAAIIFSYSGETAEMIEIAKILTENKAKIITITKNSDNTLEKFADKSLYVTAKENLYRS 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 A+I + + + D+L+ A E A E + + Sbjct: 240 AAIYSRISMLNVIDILYTAYFNLIYEKALEALGKTR 275 >UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI4_9GAMM Length = 278 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L + ++S K+A ++ P+ ++ LA +AGVS+ +V +F LGY Sbjct: 1 MTLLTDLADPLSKRSKSAHKIAACVVANPEAILASTTASLAAQAGVSEPTVNRFCTGLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP KL+L+ LA + + I DD V K+ + A++ T + Sbjct: 61 KGFPDFKLSLAAELARKQ----PRMTRDIDPDDSAAKVAAKIFESTQASLSNTQDHLDLA 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + +AR I L G+GAS VA + KL++ A D+ D Sbjct: 117 ALQDVVAAMSNARSIALCGLGASASVALDAQHKLLRFPIPIMAHTDIINQRVVAAGLGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ ISYTG + A+ + G +V IT + L L + E Sbjct: 177 DLLICISYTGRTTAMIELAELAVSRGCQVAGITS-PHSPLANTCPLVLGVESGEDTDRYT 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ AQ ++ D+L L + E + ++ + + + Sbjct: 236 PMTSRIAQLVIIDILATCLALEQGEAFADHLQEVKRNLSQ 275 >UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PED1_BACCO Length = 289 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ + L++S+KKL +Y+L + ++ +LA +AGVS ++VV+F + +G Sbjct: 6 NIILQIKSKLTSLSKSEKKLGEYILSHAVETVNDNTSELAKKAGVSPATVVRFCRSIGLS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L A I+ I ++ + ++ +KL ++ T N+ Sbjct: 66 GFSQLKIRL---YADASGGLDREIYTDITPNEDITMIADKLALRFNQSITQTANLLETSC 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + M+ + I + GIGAS + A++F K +IG D H L +++ +S D Sbjct: 123 IEKITAMVDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDHHLLGSSLINASKDC 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSA 240 + +AIS +G E + G + IT + L L E SA Sbjct: 183 MFVAISNSGETNEAIKLTQIAKQNGLFTVGITQKRDSTLASIVDAPLIHHGGEAVLLRSA 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ AQ D+L+ A + + R+++S+ ++ Sbjct: 243 ATTSLAAQLFTIDVLYFAYVAKHYHEIMGRLKNSKINIQ 281 >UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocaceae RepID=Q03YQ8_LEUMM Length = 284 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 136/279 (48%), Gaps = 2/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + ++R + + +++KL D+++ AR + Q+++ +GVS +++ +F +K+G + Sbjct: 4 NIIAQLRAQRKQYNTTEQKLIDFIINHVSEAREANIQEMSELSGVSTATISRFVKKIGLE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++L+ A+ + SV + +I D V +K+ A+ AT++ + + Sbjct: 64 SFREFSVSLAS--AATQMAASVDLFGEIADTDDTIAVAQKVFGGAENALAATVSNLTATQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E L SARR+ GIG S +VA N K ++ + A D L + +D Sbjct: 122 LDEATLALISARRVGFFGIGGSSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLNSND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G ++ L A ++ K++A+T F + L + A L ++AEE S S Sbjct: 182 TAVVISHSGRNKDTLLIAKKLHEQHVKIIAVTSFKDSPLAKLADLVLLSLAEEVNFRSES 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + + ++++ Sbjct: 242 MSSLIAQLTIIDTLFTLVGSHLSQDTQSVVDTMRDVIEE 280 >UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=Pediococcus RepID=Q03HR4_PEDPA Length = 270 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 136/278 (48%), Gaps = 14/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + Q+Y L++ ++K+A ++ P + ++ L+ +A VS ++V +F +K+GY Sbjct: 1 MNIIDVVEQKYPSLSRQERKIALKVVQHPADVKKMNINTLSKKAEVSTATVTRFVKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+EA ++ I + + +++ + T +++ Sbjct: 61 PDFSQFKLGLAEATSN------------ITENVDNAPLPDQVTDFYNQMITGTWKRINQK 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ ++++A R+ + G+G+SG AQ + +LM++G NA A D H + + D Sbjct: 109 TLNQVAMLIKNAPRVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISSSIMQKD 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ +S +G E+N A + KV++IT F + L + + + L E N+ Sbjct: 169 DLLIVLSVSGKSNEVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQLSVQYSEFVDNTQ 228 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ + D+L L+Q E R + + A + Sbjct: 229 FINSQLGVVYIIDILSTMLLQN--ETYKARYQQTVAAI 264 >UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI5_9CLOT Length = 294 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 2/279 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +L IR + Q + K +A+Y+L + + LA E+ VS+++V +F + +GY+ Sbjct: 14 IVLDIRSKMQDFNPAQKAVANYILNNFYDMEGMPIRDLAVESEVSEATVSRFVKAMGYEN 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A +L ++++ A + S+ + ++ +D + K+ + N A+ TL V + L Sbjct: 74 YRAFQLEVTKSKAER-RKGSLKGYAEVTEEDNAPGICRKIFESNIQALQDTLTVIDYDAL 132 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ARR+ + G S + A + +L ++G D H P+D+ Sbjct: 133 ERAADLIARARRLCIFAQGRSKVTANSIRLRLHRLGIEGTLYTDPHEQAIASSLMGPEDV 192 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSAS 241 + IS G R + ++ G ++ +T + L++ A L +E S Sbjct: 193 AVGISTFGRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEADILLRTVNNDEADFGSEP 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A Q ++ D L++ + ++ A ER + + +++ Sbjct: 253 SCASVTQMVMLDCLYMLVAKRMEGKAEERFKITRDAIQQ 291 >UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM70_9ACTN Length = 283 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 4/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R+R L+ +++LA++LL P A ++ Q+A G++ S+V KF QKLG++G Sbjct: 6 IRVRVRALESSLSDKERQLAEFLLADPHKASKMTISQIAQTLGMADSTVFKFTQKLGFEG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + L+ P V IH I + + E + + + ++ T + SE+ + Sbjct: 66 FRDFRGELAAE----GFDPEVSIHEHITHKSTPKQMAETVFESSIRSLTDTKELFSEQDI 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++ G+G S +VA + K ++ A D H L S+ DD Sbjct: 122 IHAAKLIEDCYQLTFYGMGGSSVVAADAYHKFLRTPKRVAYDADFHLQLMRASRSNGDDC 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L +S++G + A+++ VG + IT + L A CL TIAEE A S S+ Sbjct: 182 ALLVSHSGRCIQTIQIAEKLREVGASTIVITSNPSSPLTALADACLVTIAEETAYRSESL 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +Q L D L+ ++ D A ++ ++ Sbjct: 242 ASRISQLALVDALYTIVMFSDENAASRSLKEVREVIS 278 >UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales RepID=D1PSB4_9FIRM Length = 282 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 5/282 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +R RY L +S +++ADYL + A++LS LA E GV+++++ +F + LG+ Sbjct: 5 NFWELLRSRYSELTRSGRRVADYLTRHAEEAQYLSISSLAAECGVAEATIFRFCRSLGFD 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +K++L++A A P+ +++ + A+ T +V + E Sbjct: 65 GYNEMKISLAQANA----IPTAAGADKLEPGADTATLCTHASAVALEAINGTRSVLNPEA 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + T+L+ AR++ G G S ++A + + + D H P+D Sbjct: 121 IDAAATLLQRARQVFCFGQGGSQILANDIWARFATVSTKFRTAGDSHMQTIAASLMVPED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L ISY+G R++ + G KV+ +T + A L A+E + S Sbjct: 181 VVLFISYSGSTRDMMETLRIVKGNGAKVILLTHYADAPGTALADVVLLCGAKESPLDGGS 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLE-LAPERIRHSEALVKKLV 282 I+A A + ++L + + E A R R S+AL KL+ Sbjct: 241 IAAKIAVLFVAEVLVLRFTLDNQELAAIARERTSKALAPKLL 282 >UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R285_BRAHW Length = 285 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 141/281 (50%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L IR +Y+ +++ KK+++Y+L P L++ ++ GVS +SVV+FA+ LG+ Sbjct: 1 MNAYLIIRDKYEDFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG LK++++ + + I+ I DD + + K++ ++ +E Sbjct: 61 KGLDELKISIAS--KNGDDDNKYNINTIISADDNVEELCNKIMLLIKSSNEDFFYQLDKE 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++R+AR I + GIGAS L A + KL + FNA D H + + Sbjct: 119 ALEKAFKLIRNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYLTEE 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++A SY+G E+ ++A+T N L + A + E+ T Sbjct: 179 DVVIAFSYSGRTNEVIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELTRMG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ +++DLL+ IQ+D E E + ++ L ++L Sbjct: 239 AITSKYSSLIVSDLLYFGAIQKDFENIKENLINTSILTREL 279 >UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enterobacteriaceae RepID=A1JQZ2_YERE8 Length = 286 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 167/284 (58%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I LA++ KK+A +L P++ +SS Q A +AGVSQS++VKF+QK+G Sbjct: 1 MSILNEITWLLPELAENQKKIAKCILDNPESILSISSSQFAEDAGVSQSAIVKFSQKIGM 60 Query: 61 KGFPALKLALSEALASQP---ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGFPALK+A+SE L+ P +HN I +D L ++ +KL E TA++ T Sbjct: 61 KGFPALKIAISEELSRNNLFKSYPHKALHNSISPEDSLMVMAQKLAHEKTASIMETTRKI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + V+++ +A+R+ + GI +GL A++ ++KL KIG D+H +A Sbjct: 121 NFSVFQQVVSLINAAQRVQIVGIWGAGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +P D+ + +S+TG R+++ +AA G V+AITG + L + A + L +I++E Sbjct: 181 TPKDVQIVLSFTGRRKDMKIAATVAKAQGATVIAITGSKVSPLAKIADYVLESISDENEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+QQ E+A I ++ + L Sbjct: 241 RSSSISSRTAQNTLTDLIFLALMQQRKEMAKPLILNASMTINNL 284 >UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DKU0_9LACO Length = 284 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 139/281 (49%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI + Y L +S + +AD +L P + +++++ N S +SV++F ++L Y Sbjct: 1 MNVRDRILENYTELKKSSRIIADAVLENPKILLNKNAKEIGNYTNTSAASVIRFCKQLNY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L+++ Q + + + + DD V KL + + Sbjct: 61 KGLKDFQIDLAQSTVKQSQLKPIDM--IVTKDDKADEVMTKLRVSLSQNFEDLSKTIDIK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++++ +R + + GIGAS A++ +KL++ G D+H L + S+P Sbjct: 119 DLQKAVSLIKKSRAVYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYSTPK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ SY+G+ +EL LA + + ++A+T + + L + A L E Sbjct: 179 DVMICFSYSGLTQELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLMRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ AQ ++++L++ I DL + + + L++KL Sbjct: 239 AINSTFAQMFISNVLYLCSISSDLGEVKQEMEATGKLLEKL 279 >UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2JBJ8_FRASC Length = 299 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 4/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +R L S +K+ +L P HL+ LA+ G S ++VV+F Q LG KGF Sbjct: 24 IAHLRACLPTLTPSGRKIGQLILDDPREIVHLTVTDLADRTGTSVATVVRFCQDLGLKGF 83 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ L+ P +H + D + EK++ +A+ T Sbjct: 84 ADLKIRLAGE----AIPPERGLHEAVTHADSPATILEKILHSTESALSETTRTVDRAAFT 139 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V L+ A R++L G G S +AQ+ A++ +G A A D H + P Sbjct: 140 RAVDALQCADRVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPADAHVQHVAARLLPPASAC 199 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 LAIS+TG RE A G +A+T F + L + A L + E ++S Sbjct: 200 LAISHTGQTRETLAGAAAARAAGATTIALTSFFRSPLTRLADVALVAGSSETNYRVEAMS 259 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + D LF+A+ + A + + ++ + Sbjct: 260 SRIIHATVLDALFVAVHLAQPDRAQKAQELTAEVLTE 296 >UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID=A0Z4E2_9GAMM Length = 291 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I+ GL++SD K+A +L P+ A H S LA +A VS+ SV +F ++LG Sbjct: 6 NVLTQIQAALPGLSKSDTKIAHVVLADPEAATHASIALLAQQANVSEPSVNRFCKRLGAT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P K+ L+ +L + I + +D + KL+ A+ + Sbjct: 66 GYPDFKIWLARSLVAGVRY----ISQVVDPEDTVTTYPGKLVDNTVNALLLAREQLPLKT 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A RI G+G S VAQ+ K + D L S D Sbjct: 122 LEVAVEHLDAAGRIYFFGMGTSAAVAQDAEHKFFRFQTPVTTHTDPLMLRMLAAGGSQGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG + AA G V+++T + L Q + + A E + Sbjct: 182 VFVFISHTGRTEAIVDAAALASASGATVISLTA-QDSPLAQVSHCVIGLEAPENTEDYLP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ ++ D+L + + E E + + + Sbjct: 241 MTSRIVHLVIIDILVTGVTLKRGEPCIEHLARIKESL 277 >UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=Streptomyces RepID=B5HLI6_9ACTO Length = 317 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 81/275 (29%), Positives = 129/275 (46%), Gaps = 1/275 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++R + +S ++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 37 AKVRTLGPSMTRSMHRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 96 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+LAL+ A Q + I I DDP+ V KL + + T +L Sbjct: 97 DLRLALAGLAAQQQSGRAPAITTDIAVDDPIADVVAKLAYDEQQTLADTAAGLDTAQLGA 156 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V SARRI + G+GASGLVAQ+ KL++IG A A D H + D+ + Sbjct: 157 AVAATASARRIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRSGDVAI 216 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSASIS 243 AI+++G ++ G +AITG A+ Q A H L T E A++S Sbjct: 217 AITHSGATGDVIEPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESELRPAAMS 276 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + +Q ++ D LF+ + Q+ E A + S + Sbjct: 277 SRTSQLLVVDCLFVGVAQRTYETAAPALAASYEAL 311 >UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF6_9LACT Length = 292 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 130/279 (46%), Gaps = 2/279 (0%) Query: 2 NGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 N L ++ R + ++K +AD+ + + + LA++ G+S++++ KF +K+G+ Sbjct: 4 NYLEKLLRPYIKSFNDTEKIIADHFIKLGHDVVNKTLSNLADDTGLSEATIFKFVKKIGF 63 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GFP K++++ + + + + + I +D + +KL+ N A+ + E Sbjct: 64 DGFPNFKISVASNFQNIEERKNELTVFSDISKEDSSYAIAQKLVYSNKLALDNLIGSLDE 123 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E++++ + ++ ++ I G GAS ++A + K ++ F + D H L+ P Sbjct: 124 ERINQALNLIYDSQTIHFFGQGASSVIALDSYHKFLRTRFLCNYISDYHMQLSYATKLGP 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D + S++G E A + ++ +TG L + +S +EE A S Sbjct: 184 NDCVFLFSHSGETNETIEVARILRNNQVNIIVLTGNHHTDLVKLSSISFVVDSEESAFQS 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++ + D+L++AL+ D + + + Sbjct: 244 ETLTSRILYLTIIDILYVALMYHDEAKNKDSLEKIRKAL 282 >UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBM1_9CLOT Length = 266 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 131/279 (46%), Gaps = 14/279 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++++Y + +K +ADY++ D ++++ LA E G S +++ +FA+K+G Sbjct: 1 MDILCEVQRKYNEFSDKEKDIADYIMQHGDKIKNINITDLAKEIGTSGATITRFAKKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +K+ L S + I +D + + + T + +E Sbjct: 61 DSFVDMKIKL----------GSNKVELPINDEDG---IFSYTYQYYNEVIERTKMLIDKE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + V ++ A+ I + G+G+SGL + +L+++GFN + D H ++ S + Sbjct: 108 EIFKVVNEIKKAKNIYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIVSEN 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G +E+ + + G K+++ITGF + + + + S Sbjct: 168 DLVIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYSDIKFIVYNPNFVDRSR 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ + L D L ++ +D+ L+ + A++ Sbjct: 228 FINTQFSAMYLLD-LISMVLLKDINLSNKMQTTINAIIN 265 >UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=Oxalobacteraceae RepID=A6T0F7_JANMA Length = 286 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR +Y L++S+KK+A +L QP+ A + LA +A VS+ +VV+F + +G+ G Sbjct: 2 LLDSIRTQYDSLSKSEKKVALAVLEQPELAIAENITALAKKAEVSEPTVVRFCRAIGFDG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A KL L++ LA P + +D + +K+ + + N + Sbjct: 62 WQAFKLKLAQGLALAPGTGDESP----MLEDMAADLVDKVCNRSINTLLDLRNSLDANAI 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +L A I G G SG++A + K + G A D H D+ Sbjct: 118 EQALQVLGRANTIEFYGQGTSGIIAADAQHKFFRSGVPTVAYSDPHIHSIAASLLKKGDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS G L + G ++ + + L + A+ + I Sbjct: 178 VVAISQRGSSLSLLRSVQLARSSGAAIVVL-APSGTPLAELATVLIPIDLHFHTDPYTPI 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SA A ++ D+L + L + +++ +++ ++K Sbjct: 237 SARLAHLVVIDILAVGLALRLSPERRKKMLNAQKALQKF 275 >UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteriaceae RepID=A4WDW6_ENT38 Length = 274 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 12/281 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+RQ G + + +KL ++L P +L+ +LA E+ S++SV + + LG K Sbjct: 6 NLLLRLRQGVSGYSPTQQKLGSFVLNDPSRVLYLTITELARESDTSEASVTRLCRTLGCK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ + + H ++ D + + E+ + A+ T + E Sbjct: 66 GYTEFKMALALDVQRE--------HVPLKKGDEIDEIVEE----SILALQDTSRLLDREI 113 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +R + + G+ AS ++ +KL+++G A DMH + DD Sbjct: 114 LLKAAQALHQSRSVYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLTSDD 173 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G R+L + G VLA++ + L + L E ++ + Sbjct: 174 LVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAKPEGPLSAGA 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++A +L +LL +I D + + A + L+ Sbjct: 234 LNAKVGVMLLVELLATTMISLDDRYGDASQQTASATLPLLL 274 >UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6X6_RUMHA Length = 297 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQ--GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M R+ + ++++K+A YLL D + H + +LA+E GVS +S+V+F + + Sbjct: 17 MGCRERLIDKRDGEHTKKTERKIAAYLLGNFDKSLHSTLLELADEIGVSDASIVRFCKSI 76 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY GF K+ A Q + + DD + +K+ ++A+ T Sbjct: 77 GYTGFQEYKI----NAALQSVPEPRLYNPSLSVDDNPAEICDKIFAIESSALEQTKQELD 132 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +++ +L ARRI L G G S + A++F KL+KIG A D L + + Sbjct: 133 ISVMNKVADVLLKARRINLVGTGGSAISARDFQHKLLKIGVRAELQEDKDLQLMSASLLT 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D+L AIS++G + + + K++ +T + N L ++A + LY ++E+ Sbjct: 193 EEDVLFAISHSGSNLHVAETIELAQKRNAKIITLTMKSKNILVEKADYPLYVVSEKTIFE 252 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S S SA AQ + D L + ++ + + E ++ + Sbjct: 253 SESFSARLAQLAMLDCLVALMAFKNFDGSLEAMKATRIATS 293 >UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU7_9FIRM Length = 281 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 130/280 (46%), Gaps = 2/280 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ Y L+ S+ ++ Y+L +S+Q+LA ++ S ++V++ ++L Sbjct: 3 MSVLVKLRE-YHTLSNSENEVRMYILRNSKKVISMSTQELAAKSYTSPATVIRLCKRLEL 61 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ LK+ L+ + + + + V + D L + +K+ + ++ T + Sbjct: 62 KGYSELKIQLASEIKAFETMNLDVVDQTTFKKGDSLTELIDKVTDISIHSIEETRLLLDY 121 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + A I L G+GAS +A + +K M+IG + + + + S Sbjct: 122 EVLLCVARQIMDASIIDLYGVGASNNIAFDAGYKFMRIGKSISCLSLIDRQRIQAINSDS 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + ISY+G E+ A + + ++ITG N L + L+ + E + Sbjct: 182 SHFAIIISYSGETPEIIEIAKILEKNNVPAVSITGSIQNQLVNLVEYNLFVSSRESNFRN 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +I + + + DL++I I + + + +R+ + + K Sbjct: 242 GAIVSRTSTLYMLDLIYITCISLNYDDSAKRLGQTLTISK 281 >UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBX8_9LACT Length = 285 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL IR++ L QS+KK+A+ +L P +S+ LA EAG S ++V++F + +G K Sbjct: 4 NVLLTIREKKITLPQSEKKIAETILRDPVKVIQMSATDLATEAGSSSAAVIRFCRSIGIK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS + ++ I D+ L V +K++ T NV ++ Sbjct: 64 GFTELKLQLSAD----SQGIKDNLYTDILADENLEQVKKKMLINTNHLFKETNNVLDTKQ 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + I L G+GAS +VA + K ++G D H L+ ++ + + Sbjct: 120 IERVSELLHESSIIYLYGLGASHIVASDIQQKFSRMGKIVVCSLDQHLLVTSMAVAGENA 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +S +G ++E+ +G K +A+T T NAL A L T A E S Sbjct: 180 VFFGVSNSGEKKEVLALMIMAKELGLKTVALTNNTENALSLEADIALKTAFAHEAPLRSG 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q D+LF ++ +L + S+A +++ Sbjct: 240 ATISLLTQMYAVDILFYDYASKNYDLTVTNLEKSKAAIQR 279 >UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=A2RL41_LACLM Length = 283 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 138/282 (48%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ LL IRQ Y +KK+ADY+ + S+Q++A+E G S +++V+F++KLGY Sbjct: 1 MDTLLIIRQNYSNFTTVEKKIADYIFEVGEKMLEKSAQEVASEIGSSSAALVRFSRKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK LS + A + ++ + + KL + T S++ Sbjct: 61 DGFSQLKQKLSASYA--VHEDDEDYYKEVNDSETPSSIKNKLKVRVNHMVETTNAALSDD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V ++ A I + GIGAS +VAQ+ K +IG ++D H ++++ S Sbjct: 119 EIMAAVALIDEAESIFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSISDRK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNS 239 + + IS G +E+ A + + ++AIT + L Q + + L++++ E + Sbjct: 179 TIFIGISMKGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILHSVSGEDYQMRT 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A+ + AQ + D+LF + + + +++ + +K L Sbjct: 239 AATMSLMAQLYVVDILFYMFVSEHFTESYDKLEKTRDAIKLL 280 >UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n=48 Tax=Gammaproteobacteria RepID=B5FDJ7_VIBFM Length = 283 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 167/283 (59%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + L+ + K+ D++L P + SSQ LA + GVSQSS+VK Q+LG+ Sbjct: 1 MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSSIVKLTQRLGF 60 Query: 61 KGFPALKLALSEALASQPE--SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 KGF A KLA+ E L + P PIHN+I DD + +KL++E T A+ AT N + Sbjct: 61 KGFTAFKLAIIEDLGRKQAILEPERPIHNKINSDDSSLTIAQKLVQEKTHALIATTNAIN 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + T+L A+RI + GIG S L A++ A+KL+KIG A +D H +AT + Sbjct: 121 FSEFELVTTLLNQAQRIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATANTLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + ISY+G R+E+ +AA + G V+A+T + L++ A+ C+ TIA+E+ Sbjct: 181 KQDVQIVISYSGSRKEILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ ++TDLLF+ L+Q + A I + + ++ Sbjct: 241 SSSISSRTAQNVITDLLFMTLLQIKSDKAKLLIDEISSTMNRI 283 >UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QW74_CLOBU Length = 281 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 144/281 (51%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y + +S+KK+ADY+L+ S+ +LAN S SSVV+F++KLG+ Sbjct: 1 MNCSLLIKQIYDKMTESEKKIADYVLVNSSEVYKFSASELANITKTSSSSVVRFSRKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L++ + E+ I +D +R V K +N ++ T+++ E Sbjct: 61 EGFQEFKIELAKDDINPVENIEYDY---IDTEDNIREVIVKTANKNIQSINDTISLLDEH 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E + +++A+ I + GIG S L+ + +KL++I NA + H L+ S D Sbjct: 118 TIEEAIKAIKNAKNIYIFGIGESALIGLDLQYKLLRIHKNAMISLESHVQLSMSANISND 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + ISY G +E+ A + G K + IT F N + + E+ Sbjct: 178 DIAIGISYLGKTKEVYSALSKCKEKGAKCITITKFGENPVSSLGDIKIQVPFVEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ Q + D+LF+ L +++ + ++ + ++++L Sbjct: 238 AISSRIVQLTVIDILFVGLAKENFSDVEKYLKETRNMIEEL 278 >UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C5BVH6_BEUC1 Length = 299 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 1/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ L S++++A+ +L P + +QLA G S++SV +F + +G G Sbjct: 16 VLTRLPGLLPTLRSSERRIAEAILDDPQAVSRDTIEQLAARCGTSKTSVTRFCRTIGLAG 75 Query: 63 FPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+LAL+ + + ES + + +P +V ++L+ N A+ T+ Sbjct: 76 YTELRLALAGDVGRRRDESWRAELGSSADPQNPADVVVDELLTANVRALTETVRTLDRAA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L SA RI L GIG SG VA + + +IG A A + H L D Sbjct: 136 LAASVDALASAGRIDLYGIGGSGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGASD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A+S+TG E+ A G +A+T + +A+ A L T A E+ + Sbjct: 196 VAIALSHTGETSEVAAALALARDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARADG 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ HAQ + D L++ + + + +R + V+ Sbjct: 256 LAGRHAQMFVVDCLYVLVAGVLHDESQSGLRRTSEAVR 293 >UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AH41_LEIXX Length = 289 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L+ ++ ++A ++ P L+ +LA SQ+S+ +F Q L Y Sbjct: 3 DVLSAVRQAVPRLSATEARIAQTVIEHPQRVVDLTIAELAAVCDASQASIARFCQALRYS 62 Query: 62 GFPALKLALSEALASQPESPSV--PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ +LA++ A + + + ++I D L+ V K+ + T A+ T Sbjct: 63 GYREFRLAVAAATSREQATRERFELTESEIDPSDSLQEVVAKIAYQETLAIERTARELDA 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L V + +A R+ L GIG+S L AQ+ KL +IG A D H L++ P Sbjct: 123 EALDAVVAAIIAASRVDLYGIGSSILTAQDLQQKLSRIGLTAFCSVDSHLALSSAALQKP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ +A S++G RE N A G +AIT +++ + L T A E S Sbjct: 183 GNVAIAFSHSGETRETNHALAVARAAGATTVAITNVPESSIAAVSDLLLMTQARENFYRS 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ AQ L D LF+ + Q+ + + +R + V+ Sbjct: 243 GAMASRTAQLALVDFLFVRVAQRLYDQMTDSLRLTYEAVR 282 >UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY6_HAHCH Length = 285 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 132/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L +S++K+A+ +L P+ H+ LA EAGVS+ ++V+F + + + Sbjct: 6 DILSWLRQNRDTLRKSEQKVAECVLRNPNDVIHMRIVDLATEAGVSEPTIVRFCRTICFD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + K++L++ LAS + D L+ +G K+ + +++ N + ++ Sbjct: 66 SFQSFKVSLAQQLASMQRQTPFRARS----GDSLQQLGAKIFSDVQSSLQQVFNQLAWDR 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ R+ G GAS VA + K ++ + A D + +D Sbjct: 122 IEQACAWISNSPRLYFFGYGASAAVAADAQQKFFRLKPSTHACPDPDTQMLIAGLVETND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS++G L + + G KV+AI +AL A+ + +E A Sbjct: 182 VIIAISHSGRTNNLIQSCMQARASGAKVVAI-SPPQSALANIANLNIGVSVDENADAFTP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +++ A M+ D + L Q+ E +++ ++ + L Sbjct: 241 LASRLAHLMILDTIASNLFQKLDEQHVQKLNQAKKNLSSL 280 >UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enterococcus RepID=C0X1P6_ENTFA Length = 285 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 133/283 (46%), Gaps = 13/283 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + I + Y L +S++K+AD++L ++ + + + +A V +++++F QKLG+ Sbjct: 14 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF 73 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ S+ + +++ K + +T + +EE Sbjct: 74 SGFSDLKIEIAKEDFSKKKEQP-----------SSGKYHDEVAKSLIEVLQSTSCLINEE 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + + ++ A + + G+G+SG + + +++G A AV D H + Sbjct: 123 KLTKAIQLINQASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLTDR 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ S +G ++ + G K+LAIT + + + + A L T EE N Sbjct: 183 DLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEE-FLNGG 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKKLV 282 S++ +Q + DLL Q + + + R + +++ K + Sbjct: 242 SLAGKISQLYICDLLVHEYEQNNKINSLDLREKVLRSIIDKRI 284 >UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJX2_STACT Length = 288 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ IR++ + L ++++ +A +LL P+ +S+Q L + S ++V++ A KLG+KG Sbjct: 6 LIIHIREQMKHLTKNEQHIAQFLLEHPEKVLEMSAQTLGDVTKTSSATVIRCAHKLGFKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LKL+LS L + +I D+ R + KL+ + T + ++ L Sbjct: 66 FVDLKLSLSRNLPQHEAHN----YKEIAQDESPREIKRKLLSRAAYTLETTEVLLEDQAL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD- 181 V L ++I++ G+GAS +VA++ K + G D H L + D Sbjct: 122 EALVDKLYDVQKIVVFGVGASHIVAEDIYQKFTRAGMEVIQSADAHVLATVLAGYHKKDN 181 Query: 182 -LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATNS 239 L + +S +G +E A G V AIT + + L A L + E++ Sbjct: 182 VLFIGVSNSGHNQETLRLAHVAHYYGATVAAITSRSDSKLAGEADIVLLHDASSEKSLRL 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ S+ AQ M D+LF + +D + + ++ V+ Sbjct: 242 AATSSLIAQLMTVDILFYTYLSKDYQAHVAHLSETKKAVE 281 >UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7REF2_ANAPD Length = 279 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 153/281 (54%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++I++R + SD K+A Y+L +P ++SQ+LA+ G SQS++++F QK+GY Sbjct: 1 MTYTIKIKERSEDFTPSDTKIAKYILDKPGEVIKINSQKLADLTGTSQSAIIRFVQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ +LKL ++++L + + + I DD + + EK +++ T + E+ Sbjct: 61 KGYTSLKLDIAKSLENDEINLKSEV---ISADDKVGDIIEKSKINVISSIEKTYALIDED 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + + + A + L GIG+SGLV ++F +KL + G A D H L+ + D Sbjct: 118 QISKAIDNIVYANFVYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTNIKED 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ I+YT + +E+ +AA+ +G K+++IT L + + E+ Sbjct: 178 DLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLANMSDILIPIPEIEKKMRYG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A ++TD+LF I ++++ + + S+ L KL Sbjct: 238 AISSRFASQIITDILFYGYISKNMDEVVKNLMVSKELTDKL 278 >UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1Y9_BEUC1 Length = 307 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 1/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +R+ L S ++ A+ +L P + + LA +G S S+V + ++LG Sbjct: 16 GILAELRRLLPDLPDSVRRTAERVLADPVASVAGTITDLAEASGTSPSAVSRLCRRLGVD 75 Query: 62 GFPALKLAL-SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PAL++A+ ++A AS + I I D L V L + A++ TL + Sbjct: 76 GYPALRIAVVADATASASSPWEIDISRTIGPTDSLEDVAGTLGAATSRAVHDTLAGLDLD 135 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + ARR+ L G+ S ++ +L +IG + D+H L P Sbjct: 136 VLRDVAHAVAGARRVHLYGVSGSAVMTAELQLRLHRIGIATWSFADVHEGLTGAALLGPG 195 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+SYTG E +A+TG ++L A L T+ EE Sbjct: 196 DVAIAVSYTGETIETLEMLRAAGSRDALTVAVTGAPRSSLAAVADRILVTVTEETTFREG 255 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++A ++ + +LL++A+ Q E E + + V++ Sbjct: 256 PLAARFSELTVVELLYLAVGQLTYERTTELLTQTALAVRR 295 >UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 Tax=Vibrio shilonii AK1 RepID=A6D304_9VIBR Length = 289 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 4/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR L ++++ +A+ L + S ++A VS + +VK ++KLG+ G Sbjct: 13 VIPNIRMMMPSLTKTEQSIAENFLQPHFLQKSTSINEVAERLSVSPALIVKVSKKLGFSG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK E+L +Q E+ S ++ DD + K+++ + A+ LN + Sbjct: 73 FKQLK----ESLYAQSETQSYAPSERLLPDDSAEKIVSKVLQNSINALTEILNFVDVSMV 128 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 L AR I L +G S ++ ++F KL++IG ++ +D H +L + + D+ Sbjct: 129 DAAAEALLKARNIELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMTDQDV 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + + G V++IT L + LY A + + Sbjct: 189 VLVVSHSGQTVDLMDAVRQAKQSGATVISITNNYHAELSSLSDIPLYAPASPEPVLGKNG 248 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A + + D L+ + + LA E + + V++L Sbjct: 249 TARLVKLAMIDSLYATMASKMPSLAEESLSKTIRAVERL 287 >UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KLH9_PECWW Length = 320 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 I GL+ +++ +A+Y+L P L ++LA E GVS++++V+F + +GY Sbjct: 35 KVRTYIANILHGLSDTNQTIANYVLQNPSMVAQLPVKKLAVEIGVSEATIVRFCKHIGYA 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK AL+ L S+P+ I +D V +K+ A+ T+++ + Sbjct: 95 GLLELKSALNREL-FDDSDLSLPVTPDILMNDTRHDVAQKIALTVDRAVKETIDLIDMQT 153 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ V++ SARR++ G GASGL A K+ +IG ++ A D ++ + PDD Sbjct: 154 INQIVSLFISARRVMFIGFGASGLAALEARDKMNRIGIDSDAFTDRFSMTLKLANLKPDD 213 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A S++G E+ A + G LAIT T + L ++ L T E + S Sbjct: 214 LVVAFSHSGETPEVVNAFKLAEKAGATRLAITHSTHSPLTSLGNYVLLTCGESERYQGDS 273 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I +Q + + L L +Q+ + + +AL+ K Sbjct: 274 IGTRVSQLFMIEFLCTELTKQNFKDFSSQSISIKALLIK 312 >UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q040R4_LACGA Length = 283 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ Y + KK+ADYLL P T +Q L S +S+++F Q+LG+ Sbjct: 1 MDLSTKVLNNYPNFKGASKKIADYLLAHPKTFLQEDAQGLGKMTKTSAASMIRFCQQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L++ E PI + D +V +KL+ T ++ Sbjct: 61 KGLKDFQIQLAQDTPQDNEETIDPI---VDHHDNPHIVLQKLLSSIEKNTEQTAHLIDGL 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L++A RI L G+GAS L AQ+ +K ++ N +D+H L + S Sbjct: 118 ALNQAINFLKNADRIYLAGVGASSLPAQDLYYKFIRSDKNVVFNQDIHIALERICYSHST 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L+ SY+G+ +E+ L AD+ + ++ +T + L + A L +E+ Sbjct: 178 DALVIFSYSGLTQEILLMADQARKNHTPIIVVTRSRQSPLVELADVVLGVSTDEKLLRVG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ ++ +LF+A I Q+L ER R +E + +L Sbjct: 238 AINSLFSEMFVSSVLFLATINQELPRLEERFRETELITNQL 278 >UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGH5_VIBHA Length = 296 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR R L ++++ +A+ L + S +++A GVS + +VK ++KLG+ G Sbjct: 20 VIPNIRMRMPSLTRTEQSIAENFLKPHFMQKSTSIKEVAERLGVSTALIVKVSKKLGFSG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK AL+ S +PS Q++ DD + K+++ + A+ LN + Sbjct: 80 FKQLKDALNAHHHSDSYAPS----EQLQPDDSCEQIVTKVLQNSINALTEILNFVDANMV 135 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +AR I L G S ++ ++F KL++ G A+ RD H +L + S D+ Sbjct: 136 SAAAEAIINARNIELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLSEKDV 195 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + G +++IT L Q + + LY A + + Sbjct: 196 VLVVSHSGQTVDLMDAVRLAKQSGATIISITNNFHAELSQLSDYPLYAPASPEPLLGKNG 255 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + + D L+ + + + A E + + V Sbjct: 256 IARLVKLAMIDSLYATIASKIPDQAEENLEKTTKAV 291 >UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0I0X8_VIBCH Length = 282 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 127/274 (46%), Gaps = 6/274 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R+R +G + K +AD+++ D+A++L+ +LA + S+++V++ + LG+K Sbjct: 8 NLLSRLRYGMEGYSPKLKTVADFIVSNADSAQYLTITELARDTMTSEATVIRLCRDLGFK 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ ++ P +N + +D + + ++ T + ++ Sbjct: 68 GYSDFRMALAIEISQ----PQFTKNNDVAKEDG--DRIDDATQSAITSLQDTSILIDRKQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ M+ A I G+GAS +V + +++L +IG ++ D H S+P D Sbjct: 122 INRICQMIHQADNIHCVGVGASSIVGRYLSFRLTRIGKSSTMFEDTHIAAMRAVKSTPSD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L AIS +G +++ A + V+++T + L + + E + Sbjct: 182 LWFAISSSGSTKDVVYVATRAKKQQSPVVSLTNIRHSPLSVTSDEVMVAARPEGPLTGGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++ + +L D+L L+ + E A +E Sbjct: 242 FASKVSALLLVDILINQLVAEHAEYAESVKDTAE 275 >UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0W9_9CLOT Length = 310 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 129/277 (46%), Gaps = 1/277 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI +Y L++S+KK+AD++ A L+ +++A EAGVS+ S+++F++ +G G Sbjct: 31 LLFRIATKYMALSKSEKKVADFIKNFNGKAEKLTMKKVAKEAGVSEPSIMRFSKSIGLDG 90 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L + + I +D + ++ K++ + + L S + Sbjct: 91 FNELKYCLMKTKKDDEGTMKPLHGFDINREDTIDMIPGKIVMTVENQINSMLESISLKSY 150 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +A+ + + + S A + A KL+ +G N D + + + +D+ Sbjct: 151 SDMINCIINAKNVDIYSVENSVSSANDLATKLLYLGINVKMYTDSYLQKISAYNLTSEDV 210 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + ISY+G ++ + G + IT + + + + A L + +Q +I Sbjct: 211 AIGISYSGNSKDTVEMIKTAKKRGATTVVITNYKDSKIVKYADI-LICTSSDQMLYGDAI 269 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + Q ++ D++++ +I D + E + +E ++ Sbjct: 270 FSRAIQLVINDMIYMGIIHSDYDKYIEILNKNEKAIR 306 >UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus RepID=D0R5V5_LACJF Length = 272 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 11/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + R Q L +S+ KLA+Y+ + + + + L +++V+ +KLGY Sbjct: 1 MEFIQRYNQNKDKLTKSENKLANYIATHTEHVIYDTIKSLGTANNTGDATIVRLCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL++ + K++ +++ T + + Sbjct: 61 SGFSDLKIALAQDSMMTTSKSHEEAQ-------TSSELSSKVL---ISSIEKTEELINPS 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L ARRI + G+G SG A+++ ++IG A A D H + S D Sbjct: 111 VLKQAVSLLAKARRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLLSKD 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G ++ + G K++AIT + + Q L T E N Sbjct: 171 DLVVGLSLSGHTKDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSE-FMNIG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ +Q L D+L + + + + A V K Sbjct: 230 TVAGQVSQLYLCDVLAREYEKLNKVDVDKIKEQALAAVMK 269 >UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=Shigella flexneri 2002017 RepID=D2AGN5_SHIF2 Length = 333 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 151/265 (56%), Gaps = 3/265 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +IR +++K+AD+L + + +SS+Q+A + G+SQSS+VKFAQKLG Sbjct: 68 MLYLTKIRNAESEFTGNEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGA 127 Query: 61 KGFPALKLALSEALA---SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 +GF L++AL + + + ++ +H+ I DD L ++ KL +E A+ T + Sbjct: 128 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALF 187 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +L + + ++ A I +TG+G S LV ++ ++KLMKIG+ A D H QA Sbjct: 188 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 247 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A L T++ E Sbjct: 248 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW 307 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 S+S+S AQ +TDLLF+ L+Q Sbjct: 308 RSSSMSTRTAQNSVTDLLFVGLVQH 332 >UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYS8_9CLOT Length = 282 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 4/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I Y L ++KK+ADYL+ P A +S +LA+ SQ+++++F +K+G KG Sbjct: 7 VRDQIFSTYDSLYDAEKKVADYLISHPSEAIEMSVSELASHCDASQATIIRFCKKIGCKG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ Q E + I D ++ + AT + + E+L Sbjct: 67 FHQLKIKLAGE-QRQQEEQVISNEIDIDQMDKS---LNNIMISKVEEIKATFHNFNPEEL 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V ++ A I +G + +A + ++K ++G A + + A + D+ Sbjct: 123 REIVDLIIHANLIEFAAMGDTIPIALDGSYKFNQLGLKAVSSTIWESQEAFSRTLRKGDV 182 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 AIS +G + L + + G +AIT + + L + H L T E + Sbjct: 183 FFAISASGASKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCDHVLLTATREHIFHDQVS 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + D LF+ L + +H +++ ++ Sbjct: 243 FTRMAAMSVIDTLFLLLFSTKWDSFENVAQHEQSVAEE 280 >UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillaceae RepID=Q03CI3_LACC3 Length = 280 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++++ L+ +KKLA YL PD A + +L+ GVS +++ +FA+ LGY Sbjct: 3 DFLVQLQIYKPNLSGQEKKLAAYLQAHPDHASQANISELSQLTGVSTATISRFAKALGYT 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F AL++AL++ + ++ D + + +K+ N A+ TL + Sbjct: 63 NFQALRMALAQ----TSPEDDHALFAELSPKDSVDTLAQKIFTSNIDALRTTLANLDTDA 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + A + L G+GAS LVA + K ++ A D H L P D Sbjct: 119 LTKAVKWITHAEHLGLFGLGASNLVALDGYHKFLRTAIPVAYAADYHMQLMAATHLGPRD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ S++G ++ A+ + ++ ITG + L + A +AEE + + Sbjct: 179 AMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMADAAFVAVAEESRYRTEA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A A+ + D LF+ + R A + Sbjct: 239 LHALIAEISIMDTLFMISAIKTDSQTAPLFRQVRATID 276 >UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q03CT7_LACC3 Length = 289 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 5/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + L++++KK+ DY++ +S LA AG S +SV + A++L + Sbjct: 1 MSVKGNYQSTRSELSETEKKIVDYVMAHSQAVLTMSVHDLAKAAGTSPASVSRAARRLQF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK+ L+ L +I+ + L + +KL+ + ++ T++ +E Sbjct: 61 SGYNELKMQLAADLKGDTNQSD---DQEIQKNATLTTIKQKLLIDANQSLRETVDQINEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS-P 179 + + ++ + R+++ G+GAS L AQN A K ++G+ D++ L + Sbjct: 118 NVDTIINLIHQSDRLLVFGVGASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATADVE 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATN 238 L IS +G E+ LAA + G +V+ T N+L + A + T E Sbjct: 178 QTLCWFISNSGESPEVVLAAKLAKKAGLQVIVTTKLGKNSLTKYADVSIQTSQPMEARNR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ + H Q ML D+L+ A + + + A S+A V Sbjct: 238 FAATQSLHTQFMLIDILYYAYVSRYYDAAKIATDQSKAAVT 278 >UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945F6 Length = 248 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 126/242 (52%) Query: 40 LANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVG 99 LA A VS++++V+ ++ L KG+ LKL ++ LA S + +I D + + Sbjct: 3 LAELAEVSEATIVRLSRSLNLKGYQELKLRIAADLAQSLNSNLAESYQEIHMDASSQSLV 62 Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 E + N ++ T++V + ++L + +L AR+I L GIGAS ++AQ+F KL +I Sbjct: 63 ESISHNNMRSIQDTMSVLNIKELDRAIEVLGGARKITLFGIGASAVIAQDFKQKLTRINR 122 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A D + D +L ISY+G +++ LA G ++++T F N Sbjct: 123 WCEAAYDFDSQATLAANLQEKDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFGHNP 182 Query: 220 LQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++A L+T + E++ S ++++ AQ + D+L++ + +Q+ E + ++ VK Sbjct: 183 VAEQAHIRLFTSSLEKSIRSGAMASRIAQLNVIDILYVGIARQNYEENILALENTRKAVK 242 Query: 280 KL 281 + Sbjct: 243 MM 244 >UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SX74_9RHIZ Length = 314 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 114/275 (41%), Gaps = 5/275 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ Y L ++++++AD +L A S+ LA AGVS+ +V +F + +G + Sbjct: 27 DIISLVKDSYSELRRAERRVADVVLDDVKYAVDASNAALAQRAGVSEPTVTRFCRAIGCE 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL L+++L + G + E A+ + Sbjct: 87 GLRDFKLKLAQSLVVGALY---LAKSPAPGSGNGMPFWNAVFGEARRALQEAERQLDPVE 143 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ AR++ + G+ G+S +AQ ++L + G A D + + T P Sbjct: 144 LQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRYGITVNAQCDPYLMRMTASTLKPG 203 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG RE+ A + + +T L + L E Sbjct: 204 DLVIAISATGRTREVIEAVELAKHYRANAIGVTA-PDTELARACDVRLAVAVPEYPDTLK 262 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++ +A + DLL +A + A E +R + Sbjct: 263 PTASRYAFLAMIDLLAVASAYKLDASARETVRRIK 297 >UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNS3_LACPJ Length = 292 Score = 239 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 2/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR Y L+ +D+K+ADY++ P S LA GVS ++V +F +++ + Sbjct: 12 VLTLIRSYYPNLSVTDRKIADYIIADPIKTAAQSISDLAAAVGVSTATVSRFVKRISFSS 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ A E + + + + E +++ T V +E L Sbjct: 72 FRDFSRELTA--AEPIEQTNAEAFQDVEKQTTFKGIAESTFNSIRSSLDQTSQVMTEADL 129 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L +AR I G+G S + A + K ++ G A D L + D+ Sbjct: 130 KRAVELLLNARSIGFYGLGGSAVAALDGYHKFVRTGIPCAHNSDYDMQLMQAAQMNASDV 189 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG ++ + V+A+T F + L + ++ ++AEE S + Sbjct: 190 AVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTVAFISVAEEINYRSEGL 249 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ AQ + D LF+ E + + + Sbjct: 250 TSLIAQMSIIDSLFLMTAVHGNIEMAESLGRVREAISQ 287 >UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=Q1WQV4_LACS1 Length = 274 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 133/278 (47%), Gaps = 11/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I + L++ ++K+A +L P + ++ +LA +AGVS +++ +F +++ Sbjct: 1 MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+ + AS PE P +G+K+ + + T + Sbjct: 61 SDFHDFKLKLAISAASSPEVPVSS---------ESDSMGDKVYEFYQKVLQGTWKQLDTD 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +H V + ARR+ + G+G+SG AQ F +L+++G A D H + + D Sbjct: 112 TIHNIVHAITKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSD 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G ++N+A + G K+++ITGF + L + ++ N+ Sbjct: 172 DVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWSAVVKNSNFVDNTR 231 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ A + D++ + L+++ + + L+ Sbjct: 232 FINSQLAIVYVIDIITMELMEK--SEYSSTMNKTVELI 267 >UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EPZ9_9FIRM Length = 295 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 124/289 (42%), Gaps = 12/289 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I++ Y L +S++K ADY L +S +A AGVSQ +V++F + LG +G Sbjct: 5 LEYEIKRIYASLRKSEQKAADYYLGYDGPVETMSIAAMARAAGVSQPTVMRFVKALGLEG 64 Query: 63 FPALKLALSEALASQPESPS-----------VPIHNQIRGDDPLRLVGEKLIKENTAAMY 111 F K + +A S + +I D V +++ ++ + + Sbjct: 65 FKEFKYQVLKASMGGNGSGMGEEEGGRSEEVLRYGYEISARDRPEEVPGRVVAQSVSYLD 124 Query: 112 ATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL 171 L S + ++ AR+I + + S VA + KLM +GFN D++ Sbjct: 125 DALKHISPSSIGRAAKLICGARQIAVYYVENSASVAGDLVTKLMYLGFNCIMYNDIYLQH 184 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 + D+ + ISY+G + + G +AIT F + + A L T Sbjct: 185 ISAGNLDSRDVAIGISYSGSSKNTVDVMKLAKKKGAATIAITNFEHSLIAGHADILLCTS 244 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ Q +I + +Q + D++++ +I +D E++ S ++++ Sbjct: 245 SQ-QLLYGNAIFSRMSQTAVVDMIYMGIILRDYGHFTEKLDESSRIIRR 292 >UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C246_9CLOT Length = 292 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 115/278 (41%), Gaps = 3/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R L ++K++A+++L P +S ++LA ++++V+ + +G Sbjct: 9 NILATTRFLLPSLTAAEKRVAEFVLASPKEVTRMSLKKLAVRCECGEATIVRLCKTIGVS 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK L L ++ + + ++ + N + TL V + E+ Sbjct: 69 GYAELKSLLETQLQLPAVKEESV---RLSTGQGMGEIVARVFELNILNLRRTLEVAAVEE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +L +A +I IG + + + +IG++ A D + D Sbjct: 126 YENACEVLSTANKICFFAIGDAMFPCSYASLRFRRIGYDCYADSDADVQIVNACNMKEGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G +++ A G + IT + L + + LY + + + Sbjct: 186 VAIAISHSGRTKQVVEAMRIAKSRGAVTICITKAGKSELTKYSDIVLYNVTTDTTVDKEI 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ A+ + D +++ ++Q+ + R++ +K Sbjct: 246 IARRVAEQAMLDAVYMGVLQKMEANSFARLQEVSENLK 283 >UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=16 Tax=Enterococcus RepID=C2H8J8_ENTFC Length = 286 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 140/280 (50%), Gaps = 6/280 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI + + ++KKLA+Y++ + +++ +LA +G+S +VV+F++K+G+ Sbjct: 5 MSVISRIESMMEDYSSAEKKLANYIIGNIEKVPTMTANELAEASGLSAPTVVRFSKKIGF 64 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + K+ +S L + + + I ++ + KL A+ T+++ EE Sbjct: 65 QSLTDFKITISTELQTGIDEG----FSDIEANESFYSIKNKLGNNAQVAIKETVDILEEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V L +A + L G+GAS LV ++ K ++G +D+H LL + ++ Sbjct: 121 TIQKVVECLETAESVFLYGVGASSLVVEDILQKWSRVGKPIIFEKDIHVLLPQLVSNEKK 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNS 239 +L +S +G ++ A+ + +++A+T F N L + A + T +E S Sbjct: 181 KVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVLVQTSRPKEITNRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ D++F + ++ E E+++ + ++ Sbjct: 241 AATNSLLAQFATIDIIFYFYMAKN-ESLSEKVKKTREAIQ 279 >UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n=3 Tax=Listeria monocytogenes RepID=C8JWL0_LISMO Length = 273 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 10/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I + L++S++K+A +L PD +LS LA A V +S++V+F++K+G Sbjct: 1 MDLLATISSYFPSLSKSEQKVAQLILSNPDEVENLSINDLALMANVGESTIVRFSRKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL + SQ + D + + ++ + T + +E Sbjct: 61 TGFQDLKIALVKYQTSQKQ----------NITDESNEAKDLVYRQFVDGLQDTKSFIEQE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + M+ A + + +G S +A + +L ++G V D H V Sbjct: 111 KLEQAAKMIHRAEHVYILSVGTSAFIAMQLSNRLKRLGKFVEFVPDGHLQSIYVTMVKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ + + G V+ ++ F + + Q L ++E +++ Sbjct: 171 DIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQMGDVSLVASSKEFLSDAG 230 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S SA +Q L D L L+ + + + K + Sbjct: 231 SFSAEVSQLYLLDTLIKVLVDINPSSYHNIRSLTNKALVKRI 272 >UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2J8J9_FRASC Length = 293 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 4/260 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR L+ +++++A +L P H S +LA +G S ++VV+F Q LG +G Sbjct: 18 VLERIRALSASLSSAEQRVARQVLADPVAMIHQSVSELAQVSGSSPATVVRFCQSLGLRG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKLAL + +++ D + K++ +A+ L Sbjct: 78 YQELKLALIRE----TLPVERQLVDEVSAADGPDEIAGKVLGGAASALTEAARGIDGGVL 133 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ +A R + +G S +A + A++L +G +A D H T + + DL Sbjct: 134 AAIADLVVAAPRTLFVAVGTSAPLAMDAAYRLTTVGVDARFAGDAHVQHVTARMLAAGDL 193 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +A+S+TG E A + G AIT F + L + H + + E A ++ Sbjct: 194 CVAVSHTGSTAETLAAMRAAVDAGAHTAAITSFARSPLTELVRHAVVVGSRETAYRIEAM 253 Query: 243 SACHAQGMLTDLLFIALIQQ 262 ++ + D LF ++ + Sbjct: 254 TSRIVHLSVLDALFALVVVR 273 >UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus RepID=C2HLD1_LACAC Length = 284 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 134/278 (48%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ + L + ++ L DY++ P+ S Q+L+ + G+S +++V+F +++G Sbjct: 3 NIFSIIKGKKSQLPKKEQLLGDYIIANPENVISSSIQKLSKDTGISTATIVRFCREIGTN 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL L A S + +++ + + + + +A+ AT + ++ Sbjct: 63 GFSDLKLQLVAA----QSSVNNNDYHEFDAGEGIAAIKNTMAARFESAIEATQSGLNDNS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V + ++ I++ G GASG+VA + K M++G N + D+H LA + + + DD Sbjct: 119 VEKAVRKIYNSSSILVYGAGASGIVASDMYQKFMRVGKNINYISDLHVALAQLASFTSDD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSA 240 LL+ IS G E++ + G L +T + + ++A L T E + S Sbjct: 179 LLILISNDGKTTEVSDIQKVADKFGIPTLLLTANPRSFVAKKADLVLLTQDIGEPSIRSG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + ++ +Q + D+L + + + ++++ S Sbjct: 239 ATTSLISQMFVVDVLVFSYVSVHSDEVLKKLKRSNEAT 276 >UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=Firmicutes RepID=B1R0U2_CLOBU Length = 284 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 122/277 (44%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y +++KK+ADY+L ++ +LA AG S ++V +F +K K Sbjct: 6 SIIDTIYAEYNSFFEAEKKIADYILKYGTKLIEMTISELAEAAGTSDATVTRFCRKCNMK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L++ L+ + + + ++ ++ ++ M T+ +EEK Sbjct: 66 GFHHLKITLAKELSESQKEDTRVSGD--VSEENIKESLNNILFNKIEEMKQTILTINEEK 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 E + +LR+A + +G + VA + +K ++G + A +A +D Sbjct: 124 FKEILQILRNAGIVQFVAVGNTIPVALDGCYKFNQVGVASVANTIWETQIAYTYNLKEND 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + L + G +AIT + L + +++ + T E+ Sbjct: 184 VVIAISNSGASKRLIDVIEIAKEKGAVTIAITNSDKSPLAKLSNYHIKTATREKLFLEEY 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + ++LF+ + + + + E + Sbjct: 244 YFSRISAMTVIEILFLFMTVGKHD-VYKTLSRHEQSI 279 >UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB20_PARDP Length = 280 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 3/267 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIRQ +++++A+ +L P TA S A A VS+ S+++F ++L G Sbjct: 15 MLDRIRQSLASFTPAERRVAEAVLDTPSTAITWSISDAARIAKVSEPSIIRFCRRLDCDG 74 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP +L L++ LA +P DDPL + + + + A+ L Sbjct: 75 FPDFRLKLAQQLAKHQPAPQPLARPGSGNDDPLAAMVDDIFQRAGQAIEEARRDLDLGAL 134 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V ML ARR+ + G G+SG +A +L + A A D + + P DL Sbjct: 135 RAAVAMLGKARRVDIYGYGSSGFMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGPGDL 194 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSAS 241 L +S++G+ L + + G VLAI + + A L + + A Sbjct: 195 LFVLSFSGLTSYLISNIEIARKAGAPVLAI-SPKGSIVASLADVNLNLNAYRQSSGRMAV 253 Query: 242 ISACHAQGML-TDLLFIALIQQDLELA 267 + A + D LF A+ ++ Sbjct: 254 PTGRVAPMYVLLDALFAAMAEEMGGEH 280 >UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BCAC Length = 283 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 129/274 (47%), Gaps = 2/274 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L++R+ L+ +K++A+Y++ + +S Q LA E VS +++++ KLGY+G Sbjct: 2 IDLKLREARDSLSTKEKQVAEYIIANKKNMQSMSIQSLAQENKVSTTTILRLCHKLGYQG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L ++ + S + I +D + V K+ +++ T + + Sbjct: 62 FSDLKIDLISSINHK--SYGTLLQEDIDINDSMETVNHKVGLIEKSSIEETCALVNLNAF 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ +++I++ G G+SGLVA+ F ++L+KI + D + V +DL Sbjct: 120 KLANELISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLDQNDL 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS++G E + +AIT +++ A L+TI+ E + I Sbjct: 180 VIVISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVLHTISTEHVSRLIPI 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +Q + ++L L + + ++ + A Sbjct: 240 RSKISQLTVINMLITNLFIKQYDERIQKQISTRA 273 >UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillales RepID=Q02YU6_LACLS Length = 273 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 15/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+++Y+ L +S+KK+A+Y+L + + + + V +++V+F QKLGY Sbjct: 1 MKIETVIKEKYELLTKSEKKIANYVLASKERIVYGTMNDIKKAIKVGDATIVRFCQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ SQ S + ++ ++ T + E Sbjct: 61 SGFSDLKIEVAKESYSQKSSNRTDLTLFFDENE----------NSIIEILHETKSKLDLE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ A I + G+G SG A++ ++IG A+ H L T Sbjct: 111 QFEKSSKLISEASAIYIFGVGLSGNTAKDLEAMFLRIGVPVKAISGSHFQLQTAALLKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G EL + +++ IT + L Q + L T E+ + Sbjct: 171 DLIIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQT-VNEEFFDGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S++ +Q + ++L ++ L ++ S + Sbjct: 230 SLTGKISQLYICEIL----VKNHERLYKDKSIQSREAI 263 >UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD92E Length = 288 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 2/268 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y L ++K+LADY+L ++ LA G S ++VV+F +K G Sbjct: 6 SILEKIFSIYPVLFDAEKRLADYVLQNEAKVVDMTVSDLAAACGTSDATVVRFCKKCGCN 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ +A++P + + + + + + + TL Sbjct: 66 GFHHLKINMAKEMATKPSDGAPIVGSNELDCARMDVSLRNIFASKQEELRQTLAEIDPAV 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V +R+AR I +G + VA + A+K ++G A + +LA + ++PDD Sbjct: 126 FRSVVERIRAARFIFCAAMGNTIPVAMDAAYKFNELGLTAISAPVWENMLAMMHTATPDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSA 240 +LLAIS +G ++L G ++ +T +++ + + L+ +++E+ + Sbjct: 186 VLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQERMFFRTF 245 Query: 241 SISA-CHAQGMLTDLLFIALIQQDLELA 267 S S+ + + + ++ L+ + + Sbjct: 246 SFSSTRLSMTAVIEAVYYMLLSVKRDSS 273 >UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=A6LRG7_CLOB8 Length = 291 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 130/279 (46%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y+ L +++KK+ADY++ + ++ +LA E+ VS++++V+F +K K Sbjct: 15 SVLDKILCIYKSLHEAEKKIADYIINNKERVIEMTVSELALESSVSEATIVRFCKKCDLK 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ + + S + + + ++ + T+++ +E Sbjct: 75 GFYDLKIKIAKEMVNLKSSNISNE----LDSNNIMQSLQNILANKIEELKQTISMMNEGN 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ AR + +G + VA + A+K ++G ++ LA + +D Sbjct: 131 IKRILEAIKGARIVQFAAVGNTIPVAMDGAYKFNQLGISSVTNTIWETQLAFSYTLTKED 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +EL + ++IT + + ++ + + T E+ Sbjct: 191 VVIVISNSGASKELVALLEIANERQATTISITNHENSPVANKSKYHINTSTREKLFLDEF 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + ++ ++L++ L+ +D E A I E + + Sbjct: 251 SFSRVSAMVVIEILYL-LLTRDKEDAYNWISQHEQSIAE 288 >UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=Deinococcus RepID=Q1J2N3_DEIGD Length = 290 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 5/252 (1%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++ D +L+ P+ L+ +L+ AG S ++VV+ Q LG+ G+ KL LS ALA Sbjct: 28 RVIDQILMDPERFLSLTIAELSEAAGTSDATVVRLVQHLGFGGYQEFKLQLSRALAV--- 84 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 S + D + K+ + A+ TL + E V + AR I L G Sbjct: 85 --SRKADLTVEPQDASVTILRKIFDSSNTALDDTLEHLNLEAFSAAVQAMTLARHIELIG 142 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 +GASG+VA + ++ +++G + A D L+T P D+L+A+S++G R ++ AA Sbjct: 143 MGASGVVALSGQYRGLRLGLSCRASTDPGTFLSTCSLLEPTDVLIAVSFSGTRPQVVQAA 202 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 + G V+A+TG L + H L A ++ Q + D LF +L Sbjct: 203 RLARQAGAIVVALTGLGRTPLSKVVHHTLTVSAPGDRYRPEGLATQIPQVAILDALFTSL 262 Query: 260 IQQDLELAPERI 271 ER+ Sbjct: 263 HVAQDPYLSERL 274 >UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F2FF2 Length = 285 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 1/276 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 I R L Q++ ++ ++ +S +LA+ V ++S+++F +KLGYKG Sbjct: 9 TLINTRINELTQTEIRIYQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCKKLGYKGLS 68 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L ++ + + + + + ++L N A+ TL + E+ L Sbjct: 69 ELKTTLRLE-TDTDDTLLSKVTSLDEQTNSMTGIAQQLANNNYFAINETLALQEEQALVR 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 L +A ++ GIG S + ++ M+I N A+ D H + D+++ Sbjct: 128 AADYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNVGKKDVVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AIS++G R++ A + G + I+ ++L Q A L T S S + Sbjct: 188 AISHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPYQSDSSTI 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D+LF AL+ + E+I S ++ K Sbjct: 248 TAAQSFMVDVLFNALLFINRGGNVEKIISSLDIINK 283 >UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteraceae RepID=B9NXN7_9RHOB Length = 320 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + LA ++K+ADY+ + ++ LA VS+ +VV+F + LG + Sbjct: 33 DLIPALHNSQTKLAVQEQKVADYVKDHLNEISSMTIGNLAERCSVSKPTVVRFCRSLGCE 92 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A + ++ + ++++ A + E+ Sbjct: 93 GFRDFKLRLAQNVAVSAQYLYRNAGDESSDANSA---IDQVLGALFATLDVMRGQIDTER 149 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E R+I+ GI G S LVAQ + + ++G + V D + L A + Sbjct: 150 LEEARDACLDRRQILFAGIGGGSSLVAQEASNRFFRLGIPSFFVNDSYVLQMRAAALGLE 209 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L +S +G + AA+ G ++IT L + L T E + Sbjct: 210 DVLFLVSASGEADAIVSAAEVANGYGATTISITK-PNTRLSDISKIALLTELPEDSDIYK 268 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +A + D L + + Q+ + E +R A + Sbjct: 269 PTASRYAHLAIVDALAMTVAQEMTDETKENLRRIRASLT 307 >UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MLD6_SALAR Length = 293 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 2/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + + L ++D K+A Y+L QP ++LA E GVS++++V+F +K+GY Sbjct: 7 NVRVYLANILGSLGETDAKIAGYILQQPGLVVQFPVKKLAQEIGVSEATIVRFCKKVGYG 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK L L ++ + S+P I DD V +K+ + T+ + + Sbjct: 67 GLLNLKADLKRELLAEND-LSLPSSPDIFLDDSRNDVAQKIALTIETSARETIGLLDMKI 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V SARR++ G GASGL A K+ ++G ++ A D + + DD Sbjct: 126 VKPVVERFLSARRVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLKRDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A S++G E+ A + G LAIT + L + A+ T E S Sbjct: 186 LVVAFSHSGETPEVVNAFRLAQKKGAYTLAITHSPHSPLNELANTFWLTSGEAGPMQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQD-LELAPERIRHSEALVKKLV 282 IS +Q + + L + + + + + E L+K+ + Sbjct: 246 ISTRISQLFIIEFLCTEITRHNLRDSGMTGLSIKEILIKERI 287 >UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family n=11 Tax=Escherichia RepID=B7UNF1_ECO27 Length = 281 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 118/284 (41%), Gaps = 8/284 (2%) Query: 1 MNGLL---RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 MN + I+ Y L Q++KK+ADY+L + S +L+ ++ S++++V+ +K Sbjct: 1 MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 LGY+G+ LK+AL++ + + S + + + L+K+ + + Sbjct: 61 LGYQGYYHLKIALAKEVINPDNS-----YPDNTDFTDITSLATFLLKKQAEDLIQSTQFF 115 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + E L + +L + I G S +A A+K ++G + + Sbjct: 116 NAEVLESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSM 175 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DL + IS +G + + G K + IT + + L + ++H L T ++ Sbjct: 176 GKRDLAIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIF 235 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A S + D+L + + ++ + E L + Sbjct: 236 FEAFDSTRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRF 279 >UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK0_9FIRM Length = 364 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 130/281 (46%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +++ + +K + +Y++ P+ ++ + LA E S+S++ +F +K GY Sbjct: 81 MSFFLELQKNHSS-TPVEKSIINYIINHPNEVIEMTMEDLARETYTSRSTISRFCKKNGY 139 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF +LK+ L+ L + S D + + + ++T ++ T+ N Sbjct: 140 EGFNSLKMQLAIELNLFLKDEMSSSTSLLFEKGDNASSIIDNITSQDTYSIIETVRTNPV 199 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + + + + R ++ G+ SG++A + + ++G +L + P Sbjct: 200 EHIEKLADKILNCRHVVFLGVQFSGIIAYDAHLRFSRLGIPCKYFNTECDILTYSYFADP 259 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ SY+G + AAD + G + ++T N L + + LY + + N+ Sbjct: 260 QDVVIIFSYSGKTAVILEAADHIRGKGTFLASVTKNYNNELLEISDLHLYINSIDDPENN 319 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+S+ A L D+++ L+ + + +++ + L KK Sbjct: 320 LSLSSRIAALCLVDMIYAVLVNKKSDNFYDKLMQTNKLYKK 360 >UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X148_ENTFA Length = 295 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 133/280 (47%), Gaps = 3/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR + L+ ++KK++DY + ++ + LANE GVSQSSV +F +K+GY G Sbjct: 6 LDQRIRIKKPNLSLTEKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKKIGYSG 65 Query: 63 FPALKLALSEALASQPESPSVPIHN---QIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ ++ QP +V N I DD + +K+++ N ++ ++ Sbjct: 66 FQEFKIDIARNSNYQPTFQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTK 125 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + ++ SA+ + G G S +VA + K ++ + + D H L+ V + Sbjct: 126 ELLDNVLALMYSAKTLHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTS 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D + S++G +E A ++ + K++ +TG + + L + + + EE + Sbjct: 186 EDCVFIFSHSGKTKESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEEGLFRA 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+++ + + D+L+ + + + + ++ + Sbjct: 246 ESLASRISYLTVMDILYTNTMYHNFDQNADSLKKIRDNIS 285 >UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2D0_9BACL Length = 284 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L +S++K A Y+L LS +A++AG S +++ + + LG Sbjct: 5 SVLTQMEAMLEQLPESERKAAQYILTASAEVSGLSIHAVADKAGTSAAAITRLCRSLGLS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP LK+ LS A P P + I + ++ V +K + + A+ + E Sbjct: 65 GFPDLKMRLSVDNAK----PQRPGYYDIERGETIQNVIQKTVSNSLQAIQDMMLHLQPEL 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V R A I + G+GAS +VA + A K +++G A A++D H + A + ++ P Sbjct: 121 IEQVVDSFREASVIHMYGVGASAIVAADAAQKWLRLGKQAFALQDEHLIAAALASAPPGA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 L + ISY+G +E+ + G + + ++ F + + + A LYT A E S Sbjct: 181 LFMGISYSGNTKEVLQLFRVAQKYGVRTIGLSRFGNHKVAELADLMLYTPQAPEATLRSG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + S+ AQ ++ D+LF A E R+ + Sbjct: 241 ASSSRLAQLVMIDILFFAYASTQYEETILRLSQTHEAT 278 >UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK55_BACSK Length = 268 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 130/279 (46%), Gaps = 17/279 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I+ Y L+ ++K++ADY++ P+ ++ + LA + VS +++ +F +K+G Sbjct: 4 MLQQIQVNYHALSAAEKRIADYVMSAPEELANIHIKDLAAKCSVSVATITRFCRKVGAAN 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+++ +++ ++ E + ++ A + + + +++ + Sbjct: 64 FVEFKMSVRDSIRTEEEGG---------------ELIAEMESIYKAIIGGSRELINQDDI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + T+L +A RI + GIG+SGL Q ++LM++G D H ++ + D+ Sbjct: 109 VQAATLLENANRIEIYGIGSSGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTAADV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +LAIS +G ++ A G V+ +T L + A L + + + + Sbjct: 169 VLAISNSGHTVDIQEAVALAKENGATVILLTNHEHTPLSEMADLLLLSFSPKPFYARGFL 228 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A + + D L ++ Q+ E A R R + + +L Sbjct: 229 NAQLSIVHVLD-LISLVLAQNEERAKAR-RKTLHALSQL 265 >UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RHA3_9MOLU Length = 288 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 2/275 (0%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI+ Y L S+KK+ADY+L LS LA E VSQ +V++F + +GY F Sbjct: 8 RIKTIYNILRPSEKKVADYILNYCGKLEDLSMTLLAKEVAVSQPTVMRFVKAIGYDSFKQ 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL L++ + + + I DD + + K++ T+ + L S + Sbjct: 68 FKLELAKNY-DKENNIDILYGFSINTDDKIMDLPGKIVATATSMLENALKSLSLVNYQKT 126 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V ++ ++ I + + S VA + KL+ +G + D + + D L + Sbjct: 127 VALINQSQHISIYAVENSMGVAHDLMTKLIYLGKSVTCHSDYYLQSIDASNLTRDSLAIG 186 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 ISY+G + G + +AI F L + L T + +Q +I + Sbjct: 187 ISYSGNSKNTVEVLKIAKDAGAQTIAIVNFENTMLTRYGDIVLST-SNDQFLYGDAIFSR 245 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ L D++++ +I D + +++ H L+K Sbjct: 246 TAQIALVDMIYMGVIISDYDNYTKKLDHYSRLIKH 280 >UniRef50_P46117 Uncharacterized HTH-type transcriptional regulator in aarA 3'region n=5 Tax=Enterobacteriaceae RepID=YARA_PROST Length = 282 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 4/282 (1%) Query: 1 MNGLL-RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ L ++ ++++LA +LL D ++ +LA AGVS +SV++F +++G Sbjct: 3 MSTLTSKLESLLNRGKGTEQRLARFLLDSRDNFVAMNVAELAQAAGVSSASVIRFTRQMG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+G+ K+ L+ + + + + + D + K + A+ +L + Sbjct: 63 YRGYSDFKVD---YLSDEKQYKAESLSGSLNPYDDTEQIIAKSGQMFITAIEKSLELLDP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E + A+RI+L G+G S +VA + +KL+++ A D+H L+ Sbjct: 120 NTMDEIAQKIVEAKRIVLFGVGTSAIVAYDIFYKLIRVNKYALFSPDLHVQLSYSSNVDA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++AI+ G ++N + G + +T F + + A L +EQ + Sbjct: 180 DDLVIAITAKGNTPDINHMLKLANKKGCSTIVLTRFGQDEAVRLADLVLPYFYDEQLFQT 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I+ Q ++ D LF + E ++ + +L Sbjct: 240 GVITPQVLQMVVFDTLFFKYLTLTNEDVVLALQKEREAIIQL 281 >UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLA4_9RHOB Length = 317 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 108/279 (38%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R+ LA ++K+A+Y+ + ++ +LA VS +V++F + LG Sbjct: 30 DVISALRRHDGHLATQEQKVANYVKAHLEDISAMTIAELAGHCDVSTPTVIRFCRTLGCD 89 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ LA + S + D +++ A+ E Sbjct: 90 GFREFKLRLAQNLAVSMQYLSADPQPEPADGDTA---INQILGGIYASANVMRRQIDPEV 146 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + L R ++ GI G S V+Q A + ++G + + D + L Sbjct: 147 LDRAKSALLKTRHLLFAGIGGGSSNVSQEAANRFFRLGIPSFSTSDSYILQMRAATLQAG 206 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L IS +G + AA+ G + IT L + + E Sbjct: 207 DVLFLISASGEADAIVGAAEIAGGYGATTICITKSG-TRLANVCNIPILIDLPEDRDIHK 265 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + ++ D L +++ Q E +R A + Sbjct: 266 PTASRYIHMIIVDALAMSVAQDLAHETTENLRRIRASLT 304 >UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=Streptomyces RepID=B5GNW3_STRCL Length = 354 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 1/275 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++R + +S +++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 70 SKVRTLVPSMTRSMQRVAEAVADDPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 129 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+LAL+ A Q S + I DDPL V KL ++ + T L Sbjct: 130 DLRLALAGLAAHQQSGRSPSVTADISVDDPLPDVVAKLARDEQQTLADTAATLDTAALAA 189 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+ +ARRI + G+GAS LV + A KL++IG A A D H + D+ + Sbjct: 190 AVSAAATARRIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGDVAV 249 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASIS 243 AI+++G ++ G +AITG + Q A H L T + E A++S Sbjct: 250 AITHSGSTGDVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESELRPAAMS 309 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + Q ++ D LFI + Q+ A + S + Sbjct: 310 SRTGQLLVVDCLFIGVAQRTYASAAPALAASYEAL 344 >UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=Alphaproteobacteria RepID=Q28KP3_JANSC Length = 306 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 86/247 (34%), Positives = 139/247 (56%), Gaps = 1/247 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L+ D+++AD +L PD LSS +LA AG SQSSVVKF QKLG+ Sbjct: 27 SILTIMQAQLPTLSAGDRQIADTILGDPDRMARLSSGELARAAGRSQSSVVKFCQKLGFS 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+LA++ A A+Q +P+ +H+ I D + +KL+ A+ TL++N + Sbjct: 87 GYQDLRLAVTRAAATQK-APNDAVHSSIEVSDDASMTAQKLLASKIHALQETLSINPAKN 145 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L A R+ L+G+GAS LVA++F +KL K+G + D H +A +PDD Sbjct: 146 LDAARDALNGAARVQLSGVGASSLVARDFVYKLQKLGISVLFDADSHIQMAHSATLTPDD 205 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+++S +G E A+ + G ++ +TG PN L A L T+ +E S++ Sbjct: 206 VLVSLSQSGFSLETLRIAEAAAKRGATIITVTGLHPNPLADVADKALCTVTDEDQVRSSA 265 Query: 242 ISACHAQ 248 I++ AQ Sbjct: 266 ITSRDAQ 272 >UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK74_SEBTE Length = 284 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 135/276 (48%), Gaps = 6/276 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +++ Y L +S+KK+A++++ + + ++S ++ + V Q++V++F++KLGY F Sbjct: 13 KLKSVYNDLTKSEKKIANFIMKNFEKTKTMTSYDISKKVNVGQATVIRFSKKLGYSSFNE 72 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L ++ + I D + K+ + + TL +N E Sbjct: 73 LINSI------NKLDQEDILEKNISLGDDIATTNTKIANQYIDVIKLTLELNPVYVFEEV 126 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + + +A RI++ GIG S +V+ +F KL ++G NA D H + + +DLL+ Sbjct: 127 IEAIIAAERIVVLGIGNSAIVSTDFVNKLARVGMNAFTNLDTHLQFSMISNLGKNDLLIL 186 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G RE+ AA + ++++IT FT N L + L T + + + ++ Sbjct: 187 ISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTASFDINLRLDATTSR 246 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q + D++FI +++ D E I +S+ VK L Sbjct: 247 ITQFTIIDMIFINILKTDFSKYKEIITNSDNAVKLL 282 >UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=Lactobacillales RepID=D0RS60_9STRE Length = 277 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 14/279 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Y L +KK+ADY L LS+Q ++ VS S+ +FA+K G+ Sbjct: 4 NILPVIESVYGSLTHLEKKIADYFLSAEALTADLSAQAVSQRLYVSVPSLTRFAKKCGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ E+ + R + ++ + + T ++ EE+ Sbjct: 64 GYRQFIFEFQESSSESKNVS--------------RDLTRNVLSDYGELLNKTFSLIDEEQ 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ML +A R+ + G G+SGLVA+ ++ M++G A+ D H + +PD Sbjct: 110 FLRVGDMLNNAGRVYIYGQGSSGLVAREMEFRFMRLGMVCKAITDDHMIRMNRVMLNPDC 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G + + A +VG K + +T + L+Q+ + ++ + Sbjct: 170 LVIGISISGETKIITQAIQNAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNN 229 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS ++ D+ + + D + + ++ + +++ Sbjct: 230 ISPQFPVLVVMDIFYAYYMDLDRDHRSQIFTNTLSALEE 268 >UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax=Gammaproteobacteria RepID=RPIR_ECOL6 Length = 296 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 130/273 (47%), Gaps = 4/273 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R + +G+ +++ ++ ++LL + + + + +A VS++ +VK ++ LG+ GF L Sbjct: 20 LRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNL 79 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + AL + + + + +++ D+ + V K+ + ++ + +++H Sbjct: 80 RSALEDYFSQSEQV----LPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAA 135 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 AR+ L G G S + + K ++IG A D H ++ + D++L + Sbjct: 136 RFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVV 195 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 +++G ++ A + + G K++ IT + + + A + + + A E + SA Sbjct: 196 THSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARI 255 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 Q L D F+++ Q ++E A ++ + A+V Sbjct: 256 LQLTLLDAFFVSVAQLNIEQANINMQKTGAIVD 288 >UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C842_9FIRM Length = 276 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 122/279 (43%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Y S+KK+ADY++ P +++ +QLA SQ+SV +FA+K Sbjct: 2 ILDTIHGHYNSFFDSEKKIADYIIQHPKEVVNMTIKQLAQACNTSQASVSRFARKCQMDS 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ ++ E S I + E ++ + + AT+ ++ Sbjct: 62 FHHLKVNLARDCVNEIEQKSNTI-----STSDISGSLETILSNKISELTATIRNIDVDQF 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++++++A+ +++ +G + VA + +K +IG ++ +D+ Sbjct: 117 SVILSLIQNAKHVLVCAVGNTVPVALDCMFKFNEIGILTFTSTIWENQVSYALGLDSNDV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS +G ++ EM + G + IT + + + + + T E+ + Sbjct: 177 VIAISNSGESSQVLAVCKEMKKRGVPTIGITNNEDSVVAKECVYHIQTSTREKLFLNEFC 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + ++L++ L + + +RI E L L Sbjct: 237 FSRISAATIIEILYLFLTNA-SDNSYDRISQCEELYASL 274 >UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=Fusobacteriaceae RepID=D1AYR1_STRM9 Length = 281 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 139/275 (50%), Gaps = 1/275 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ S+K +A +L+ + + ++++A E S S+V + +K+G Sbjct: 1 MSILVKLREN-NDFTSSEKDIAKFLMNNYKNIKKIDARKIAKETFTSVSAVTRTCKKIGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L E LA+ + +++ I ++ R++ EKL K + +++ T + + Sbjct: 60 RGFQEFKIDLIEELANLEQQKLEFVNSDIERNNDTRMIIEKLNKLSISSLKETKLLQDPD 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V +++ + I GIGAS +V + +K M+IG A S+ D Sbjct: 120 IIDKVVKLIKKKKVIDFYGIGASHIVCLDAQYKFMRIGKVCNAFGPFDLQYIQAVNSTDD 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L + ISY+G+ ++ ++ + G + ++IT + N + A+H LY ++E SA Sbjct: 180 NLAIIISYSGMTEDIIKISEVLRNKGIETVSITMYGSNKVASNANHNLYVTSKESLKRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +I + + L D++++ + + +I ++ Sbjct: 240 AIYSRISMLNLIDVIYLKYSNMNFDEVSVKINETQ 274 >UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A71F3 Length = 300 Score = 229 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 115/279 (41%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I R LA + + +A L +P+ A ++A AGVS+ +VV+F + LG+ Sbjct: 11 DLFSLIHARLPDLAAAQRLVAKVFLDKPEWAMQAHVNEIAVFAGVSEPTVVRFCRALGFH 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL +++ +A SV +H + D + + K+++ + + E+ Sbjct: 71 GLRDFKLRVAQQVAL----GSVALHRNVTAVDSIDEIVGKVLRSSADILLDIERQLPREQ 126 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ L SA R+ G+G SG VA + +L + G A D + + + SP Sbjct: 127 IKRAISALGSAHRVDCYGVGTTSGFVAADAQARLFRFGIQAQTYTDANMQMFSAATLSPG 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++A+S+ G L A G V+ I L L Sbjct: 187 DGVIAVSHFGRMPFLLEAVRVARERGAVVIGI-CEPGTPLAGECDIPLTFALPASVNAYI 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AC A + D+L + + + E++R + ++ Sbjct: 246 GSDACIAHLAIIDILIVGVAFERGAAGIEQLRRLQNVLS 284 >UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 RepID=C3RI81_9MOLU Length = 296 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 116/283 (40%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ + ++ ++ +A ++L S++ +A S ++V++ +KL + Sbjct: 1 MLIIEKLN-LKEKMSDGEESIAAFILTLGKELHKYSTRNIAEATLTSPATVIRLCKKLDF 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF K + + + V + +D + K+ + T+ + Sbjct: 60 KGFDDFKEQFLKEINYLDQQYGKVDANFPFNRNDTMMKTAHKISHLYEDTVTDTMTLLHH 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L+++ I + G + +A++F K++KIG N +++ L V Sbjct: 120 DDLQKALRLLKNSNSIHIFSTGTALNLAESFKEKMLKIGKNVVISNNLNYQLYEVSCIPK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D+ + ISY+G A ++AIT F N L + AS L +E N Sbjct: 180 GDIAIIISYSGETINTIKIAQTCKNNKIPIIAITSFGENTLAKLASCKLTISTKESLYHN 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S A ++ D+L+ +D + + ++ L Sbjct: 240 LGDFSTHLATHLMLDILYSVFFLEDYDQNYDNKIKITKDLEAL 282 >UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RM35_9MOLU Length = 284 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 126/271 (46%), Gaps = 2/271 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + ++ L Y+L + ++S+++LA S +S+V+F +KL Y+G+ K+AL+ Sbjct: 3 NNFSSVERILGKYVLENGEKVLNMSTKELAKATFTSPASIVRFCRKLEYEGYNDFKIALA 62 Query: 72 EALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L S+ + + + +G D + V + + ++ T+ E+L V M+ Sbjct: 63 AQLQYSRLSNDDINANYPFKGTDSVYTVASNIANLSKESIDITMKNLDLEELRLVVLMIT 122 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A+ I + G+ +A +F +K+ +IG + + ++ L S+ + L + ISY+G Sbjct: 123 KAKVIDIYGVSGPLRIASDFQYKMFRIGKDVRISQMINEQLFQAAQSTSEHLAILISYSG 182 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHAQG 249 E+ AA + R +AIT F N L + LY + E A+ S+ + Sbjct: 183 ETEEVIEAAKILYRRKIPAIAITSFGENRLVKYTQRVLYLNSSEFIYSKIATFSSTLSLH 242 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +L D+++ + ++ E ++ L+ Sbjct: 243 LLLDIIYGCVFSKNYEDNLNYKIETDNLIDH 273 >UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=Enterococcus RepID=C0X6G8_ENTFA Length = 283 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 68/282 (24%), Positives = 133/282 (47%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + IRQ+Y+ ++ +K++ADY+L P L++ ++A+ + S +SV +F+++LG+ Sbjct: 1 MEPIRSIRQKYKDFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + LKL+++ + I + DD + + K+ A + ++ Sbjct: 61 DSWEELKLSIAA--VQAASNGKKDIDPIVAADDSVDTICMKVESLLNATIEDLFYTVDKQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ A +I L GIGAS L N K + G A D H +L + ++ Sbjct: 119 ALERAIAHVKKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYATAQ 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +SY+G+ +E +A + G V+ IT ++ + L E Sbjct: 179 DILITVSYSGLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLIRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLE-LAPERIRHSEALVKKL 281 +IS+ + + D+L++ IQ DL+ + + LV +L Sbjct: 239 AISSIASSMAIGDVLYLGSIQDDLDTEIERNMIETSQLVSRL 280 >UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWK5_9FIRM Length = 297 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 118/273 (43%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + +++ A+Y L D + + +A E S +S+ KF +KLG+KG+ Sbjct: 21 ILSKKSTFTKTENFYAEYFLKLDDEILNKTISNVAEETESSTASIFKFIKKLGFKGYKDF 80 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 +L L+ + + + + +D + K++ N +MY C+ Sbjct: 81 QLNLATNINKNSDDSLLTAITSVNENDSPDEIANKIMAFNIQSMYTLKEDIKNIPFESCL 140 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +++ +++I G+G S +A + K ++ + + D H L+ +D + Sbjct: 141 NLIKKSKKIHFFGMGGSATIAYDSYHKFLRTKYMVNYISDSHMQLSACTKMDQNDCIFVF 200 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G E+ + + K++A+TG + + + + + + E + S++A Sbjct: 201 SHSGRTLEVIEVSKVAKKNKAKIIALTGNPKSEMVKISDEAMILPSIESEHGTESLNARI 260 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + D+L I+L+ ++E + ++ +K Sbjct: 261 LYLTVMDILLISLMYDNVEENKKYMKKRLDALK 293 >UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=Clostridiales RepID=A3DDB2_CLOTH Length = 299 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 125/281 (44%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI+ G ++ K +A++++ D A ++++ +L E GVS+S+VV+FA ++G+ Sbjct: 8 DLLKRIQAGMPGFSKGQKLIANFIINHYDKAAYMTAAKLGEEVGVSESTVVRFANEIGFD 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ L E S+ + R ++ + + +++ + + ATL +E Sbjct: 68 GYPKLQKVLREMNKSKLTAVQRIEVTSSRINEG--NILKSVLQSDMEKIKATLEEIDQES 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV--RDMHALLATVQASSP 179 + V + +AR+I + G+ +S +A + I N V + + + +S Sbjct: 126 FNNIVKSILNARKIYILGVRSSAPLASFLGFYFNLIFDNVRLVHTTSVSEMFEQIIHASR 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ IS+ + A G V+AIT + L + A H + ++ + Sbjct: 186 GDVVIGISFPRYSKRTINAMRFAQNQGATVVAITDSLYSPLAKNADHVITARSDMASF-- 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +A+ E E + + Sbjct: 244 --VDSLVAPLSVINALIVAIGMSRKPHVQETFERLEKIWDE 282 >UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU45_9FIRM Length = 277 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 127/284 (44%), Gaps = 17/284 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L RI + L+ ++ LA Y++ + +++ ++A E GVS +++ +F +K+G Sbjct: 1 MGVLERIEANFVHLSPKEQLLATYIMQESPYFTNITISEMAKETGVSAATITRFCRKVGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F LK+ L + + + + + + + T + SE Sbjct: 61 ESFVDLKIQLQASEGESASNHQN------------HDMFDTVSEFYNRIIQRTSELQSEY 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +L A RI++ G+G+SGL A+ A +L ++G A + D H ++ + + Sbjct: 109 QLRQLIQVLSQANRIMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVTRSS 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +++ A + G ++AIT ++L + A L + Sbjct: 169 DVVIAISNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKLADETLLVHNSRFVNSEF 228 Query: 241 SISACHAQGMLTDLLFIA-----LIQQDLELAPERIRHSEALVK 279 ++ L D + + + Q+++ + I ++ Sbjct: 229 FVNTQLPIFFLIDAITLMMLENPVFSQNMQKTIQEITSINQKLQ 272 >UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=D2BPE4_LACLK Length = 273 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 123/280 (43%), Gaps = 10/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ +Q +S+KK+A+++L P + LA + VS++S+ +F +KL Sbjct: 1 MNILDQIQVNFQNFFESEKKIAEFILKNPKKVIDMPIALLARNSNVSEASISRFCKKLNL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + ++ + L + + + K T + A + + Sbjct: 61 TGFHQLKIELAR--------IQDNENIKVNKNTSLNELIKNISKIKTTELIAATDNLDID 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ + + G + VA++ +++ ++G + D A + Sbjct: 113 NLQSIIKIITNVKLTHFVASGNTIPVAEDASYRFNQLGITSVVFDDWQVQTAFTLNMRKE 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ IS +G + L + +++IT + + + ++ L + + + ++ Sbjct: 173 DLLIVISNSGESKSLIKLINIAKEKKIPIISITNHPDSPIARLSNFHLTSFSRDYFFHND 232 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + L +L+F+ L Q + E I+ E ++ + Sbjct: 233 YYFSRLSAMYLIELIFLILSQD--KSRLENIKLHEQIISE 270 >UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=Lactobacillus crispatus RepID=C2KD15_9LACO Length = 279 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 124/264 (46%), Gaps = 7/264 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ R L Q ++K+A ++L P + + QLA+ VS +++ +FA+++ Sbjct: 1 MTFLTDLQNRLPDLPQQERKIALFILQDPQFIQSANINQLASTIKVSNATITRFARRVNC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ L+ A AS N I D + ++ + T N + Sbjct: 61 SSFTDLKVKLAAAAASSQV-------NTITNQDNSKTTAHQVYDFYNRVLSETQNKLDIK 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +++SA+R+ GIG+SG + +L+++G +A A + + + T S D Sbjct: 114 QLKKIIQLIKSAKRVYFYGIGSSGYTSLEATQRLLRMGISAFAETESNNMFMTSSIISKD 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG L A + + V+A+T + + L Q A + ++ Sbjct: 174 DLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLADIVVGVQDTNYINDAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDL 264 I++ + + D++ L++ + Sbjct: 234 FINSQFSIMYVIDVITTLLLKNNK 257 >UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB00_9FIRM Length = 291 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 116/281 (41%), Gaps = 4/281 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RI ++ + +K +ADYLL +++S LA S S++ +F KLG G Sbjct: 2 IIERIIKQ-EEFTDVEKSIADYLLKNGYEVKNMSISSLAQVTYSSTSTITRFCHKLGLDG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ + + + V ++ G+D + ++L + N + T++ + +L Sbjct: 61 YKKFQILFNSEYEAYEKKGLVNVNYPFTGEDSYEQIAKQLERLNQETIAKTISCFNYNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V + A I + +G S VA F K+++ G + L A + + + Sbjct: 121 NRIVRRMDKADMINIFSVGTSVTVAMEFQQKMLRFGKIVNLTQQACFLPGYALAGTENTV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ---ATNS 239 L IS +G R++ + + + G + +T + + + + EE Sbjct: 181 NLVISLSGENRDVVESLNLLKEQGRYTVGMTSTPNSTVARECKEVILVDIEENNSYEAKI 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + D LF L + + + + + ++++ Sbjct: 241 DTFAIYSAFHFVLDCLFSFLYKYNFDSNTKITKEKAYMIER 281 >UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAC9_9ACTN Length = 270 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 17/284 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDT-ARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + +I +++ +A ++L + L+ E GV ++++V+F +KLG Sbjct: 1 MSIIGKIESCLPSFTKTETIIARFILDHREDGVEQYLLGDLSRELGVGEATIVRFCRKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK LS + + +++ T ++ S Sbjct: 61 LGGFTELKFLLSVENEEHTAARENSGE---------------IKDILISSIKMTDSMVSS 105 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + V + +A + GIG SGL A +L + G A+ + HA Sbjct: 106 KDISDVVDLAGAASEVFFFGIGMSGLSASMGESRLFRFGKRTKAITEAHAQNMQASLCDE 165 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L++A+S +G +L A G KV+AIT + + L + A + L + + N+ Sbjct: 166 NSLIVAVSISGETIDLIEAVSLAKESGAKVVAITSYLRSTLAELADYVLLSFGKPNYINA 225 Query: 240 ASISACHAQGMLTDLLFIALIQQ-DLELAPERIRHSEALVKKLV 282 + S +Q + DL+ + E A + R + +++ K+V Sbjct: 226 GAFSTVVSQLYILDLITSEYALRFSAEAARSKKRIARSIINKMV 269 >UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, RpiR family n=15 Tax=Firmicutes RepID=Q71VW8_LISMF Length = 268 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 15/279 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I+Q Y L +K++A Y+L + D ++++ ++LA E G S S++ +F + + Sbjct: 1 MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEETGTSISTITRFCRHVRC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ V + + E++ + T+ + Sbjct: 61 DSFVDLKMR-------------VNTAATMVPSLGYDDLFEEVYSFYHKVIDNTVKLIEPA 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E V ++ A+R+ + G+G+SGL A + +L+++G N +V D H ++ T ++ + Sbjct: 108 KIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITTKE 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ IS +G EL A + KV T F + + + + + + Sbjct: 168 DFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPVYNTLFVSKRY 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + + D++ + L+Q E + + + V Sbjct: 228 FANSQFSIMYVMDIISMMLLQN--ESYRDNMEKTINTVT 264 >UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0W4_ERYRH Length = 285 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + RI+ L+ ++ K+A Y+L P L+ +L+ S S++ +F +K+ Sbjct: 1 MLLINRIKNS-TQLSDTESKIAQYILENPQLVTQLTIHELSEITYASASTITRFCRKMKT 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF K+ L+ L+S + + + + + ++ N +M T N Sbjct: 60 EGFSDFKVKLAGELSSFSITENRIRDDVPFQSNHTSTEIVQSILSLNYQSMSDTYNNIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E+L + A I L G G S ++AQ+F +KL +I + + Sbjct: 120 EQLERIAHKIYYAPHIYLYGSGQSLILAQDFQYKLFRIELDCNLETSLGFQSLKANTQPL 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + L ISY G D ++ + ITG N L AS ++ +E+ Sbjct: 180 DSIALIISYYGQNEHNKTIVDSLVERNIPYILITGPLNNPLCTHASEVVHVSPQEELVTK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AS S+ + ++ D ++ + D E + I +KK Sbjct: 240 MASFSSRTSMQLVLDFIYALIFAIDYEKNQKIIEKHPWYIKK 281 >UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FC5_PEDPA Length = 280 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 136/281 (48%), Gaps = 9/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L + ++ ++S++K+A +++ P ++++++++ VS ++VV+ A+K+ Sbjct: 3 NILFTLSNDFEKFSRSEQKVARFMIDYPREVIQMNAEEISDRTQVSPATVVRLAKKICKS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK+ ++ + ++ ++ D L ++ KL + A+ T + + Sbjct: 63 GLPGLKIQVASEIK-----VDDSLYTEVNPSDDLDVMKHKLEFRISHAIGQTNQILLKND 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ A I + G+GAS LVA++F K ++IG + D H L V + P+ Sbjct: 118 VKKATDIVEQADDIYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTH--LMAVGLAKPNS 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNS 239 +L+ +S +G +E + ++AIT + + + ++ L E + Sbjct: 176 VLIVVSDSGETKESCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESGVLRT 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A+ ++ AQ + DLL+ A + QD R+ S+ ++ + Sbjct: 236 AATTSLLAQLYVVDLLYYAYLTQDFSNNKARLVKSKTIIAE 276 >UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF8_9LACT Length = 283 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 138/279 (49%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RI+ L S++K+ +Y+L P+ +++ QL A + ++V++ ++G Sbjct: 5 NILGRIKSVLDDLPNSERKIGEYILTYPEETIKMTTSQLGIAAESNSTAVIRLCNRIGVN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ LS + S ES + +I ++ + + KL+ +M T+++ +E Sbjct: 65 GFTKLKVNLSAEIVSVDESG----YAEIEAEETIGTIKNKLLTNAFKSMEETISLMNEFD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ SA + + G+G S ++A+N K ++G D H L++ + A+ + Sbjct: 121 IERVIELIESASMVYVYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAPKNA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L IS +G RE+ + K + +T F N+L +A + + T+ ++ + Sbjct: 181 LFFGISNSGETREIIELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDSQFI 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+ HAQ + D+LF + + ++ ERI+ S + + Sbjct: 241 SSSLHAQLIAIDVLFYSFLSKNYVAGTERIKQSREEMNQ 279 >UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillales RepID=Q03HW7_PEDPA Length = 295 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 122/282 (43%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ ++ +++++ADY+L ++ +L+ S S+VV+ +KLG+ Sbjct: 1 MLLIDKL-SNHENFTNTEQRIADYILKNITDIPPMNIDKLSKVTYTSHSAVVRLTKKLGF 59 Query: 61 KGFPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF K+A+SEA+ SQ + SV + +D + + +K+ + + ++ T E Sbjct: 60 EGFKDFKVAISEAVYSQTTNMNSVDANFPFDSNDSVSTISKKVAELSVESIQRTFAQLDE 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E + + RI L G S + A++F KL+K+ A + T + Sbjct: 120 RLIEEAANTIAKSERIFLFAQGDSQIRARSFQNKLVKLNRFAILGEEYSDEDWTAANLTK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISY G + + +TG + L + A + T E Sbjct: 180 KDCAIFISYGGRISQYERMLTHFSENKIPSVVLTGNQKSPLIRLAQTAIVTTQNEYDFLK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ S+ L D +F + ++ + +++ L+++ Sbjct: 240 ISTFSSQITFEYLLDTIFSVIYAKEYQQNIINLKNKFNLIQR 281 >UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU1_PETMO Length = 269 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 117/265 (44%), Gaps = 12/265 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +I+ Y L +K+ A Y++ +P H S +L+N AG S++++ + +K+GY G+ Sbjct: 4 SKIKGIYNSLTNKEKQAAQYIIERPGDVIHYSITELSNWAGTSETTIYRVLKKVGYSGYQ 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KL L+ L++ + + + + A+ L +K+ Sbjct: 64 KFKLELARELSTPTLDSKES-----------KDLFDMIYNRTVNALTDILRQVDRDKITH 112 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ ++++++ +G S +A + + K +GF + A D H + DD+++ Sbjct: 113 ASEIIMNSKKLLFYAVGRSFPIALDASLKFAALGFASTAYSDPHMQVIVASNLEKDDVVI 172 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AIS++GV R+ +A G + +T + L + + LYT A E S + Sbjct: 173 AISHSGVIRDTYKSAQVAKEAGAFTIGMTAGVNSPLSKIVNLVLYTSA-EMPQESEFTVS 231 Query: 245 CHAQGMLTDLLFIALIQQDLELAPE 269 + + +LL+ ++ + E Sbjct: 232 RIGEMFMVELLYNSVASKMSLKNKE 256 >UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=Alphaproteobacteria RepID=C6B6F5_RHILS Length = 287 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 7/277 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +++ L+ S+ ++A+ ++ + A + S +LA A VS +V +F ++LG Sbjct: 1 MDIFSTLQEDKGRLSPSESRIAEIIVNDFEFAVNASIIELAERAKVSPPTVTRFCRRLGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F K+ L+ V V + +I + A++ Sbjct: 61 ESFSDFKVQLAR-----TAHIGVRYLKPESKSTDPADVAQDIITKAQNALFLLHRSLDLA 115 Query: 121 KLHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + V+ + A I G G S ++A +L ++G A D L A+ P Sbjct: 116 AIEAAVSHIAKADMIYAFGSGGNSSMIADELQNRLFRLGLRITASSDHSMQLMMAAAARP 175 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ S++G EL A + + K +A+T + + + A + E Sbjct: 176 GDVLIGSSFSGRNMELVRAFELARQTKVKTIALTQT-DSPVAKAAEIVVPIDLPEGHNIY 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S A D+L + A +R + Sbjct: 235 RPTSTRIAYIATIDILSSLVAYAVQPKATTTLRRIKQ 271 >UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VMT8_LACPJ Length = 282 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 12/284 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL--- 58 + L I R + +++++K+ Y+L + +S+ +LA GVS ++V +F + L Sbjct: 3 SVLFTIHNRLENFSKAEQKIGRYILDHTNAVIKMSTAELAAATGVSTATVARFGKTLIPD 62 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G G+PALKL LS + ++++I D L + KL T + T Sbjct: 63 G--GYPALKLRLSAE-----STVDQTLYDEINPKDSLDAIKSKLALRITHTIDETNRSLD 115 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + L ++ + + G+GAS +VA +F K ++IG +D H L + Sbjct: 116 DAALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQDPHLLAVGMTTQR 175 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE--QA 236 + +LL IS +G + E A+ + V+ ++ + L + A L E Q Sbjct: 176 QNVVLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEENQT 235 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +A+ ++ AQ + DLL+ I D E +++ S +K+ Sbjct: 236 ARAAATTSLMAQLYVVDLLYYTFITNDYERHIKQLVASREAIKE 279 >UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X566_COMTE Length = 282 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 123/283 (43%), Gaps = 10/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++ + L ++K++ ++ P +S+ ++A+E VSQ +VV+F + LGY G Sbjct: 1 MLDQVMATLETLTPAEKRVGKLVIENPRRFASMSTSEIASECFVSQPTVVRFCKGLGYGG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L +H+ + D V K++ + A + + + Sbjct: 61 LTQFKQKLRGD----RSDGVPYVHSSVDAGDTSFNVALKVVDSSIATLALFRTYVPKISI 116 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L +A R + G G SG+VAQ+ + ++GFN+ A+ D ++ + + Sbjct: 117 ERASNTLAAAYSEQRSLSFYGSGHSGVVAQDAQLRFSRLGFNSTALNDGYSQVLNAASRK 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++A+S +G +EL + D R G V+A+TG L S L T E Sbjct: 177 EGDVVVALSCSGRTKELLESVDVAKRQGATVIAVTGSG-TPLATMGSIHLATDHLEDIDR 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDL-ELAPERIRHSEALVKK 280 +S+ ++ D++ A+ Q +++ ++ ++ Sbjct: 236 YLPMSSRLLHLVVIDIVATAVALQIGCGRLQDQLERTQNHLRH 278 >UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVK6_9LACO Length = 280 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 131/274 (47%), Gaps = 14/274 (5%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++ + L + +KK+A L +P+ R ++ +LAN+AGV ++V +F +++G K F Sbjct: 2 EQVQNLFINLPRQEKKVARVTLQKPELVRRMNITELANQAGVGVATVSRFTKRVGCKNFA 61 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KLAL P++ + + + +K+ + T+ + S ++L + Sbjct: 62 DFKLALV-----TPDTMQRESEQNVSTPNDIHNYYQKI-------LAETMAMVSTKQLRQ 109 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ A+R+ + GIG+SG AQ FA +LM++G A A+ + + + +D+++ Sbjct: 110 AANLIHGAKRVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESNMMTIASATMQDNDIVI 169 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A+S +G E+ A + + G ++A+T F + L + + + E + I++ Sbjct: 170 ALSVSGSTPEVCSAVRDSRKNGATIIAVTAFKNSLLGKMSDLLFQIKSTELVGDYDFINS 229 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + D+L L+Q + + + Sbjct: 230 QFAVTYVIDMLTQMLLQ--FTDFRATMNKTVEAI 261 >UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR8_PEDAC Length = 280 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 123/280 (43%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ + + +K++A +++ P +++Q+A++ G S ++V++ A+++ Sbjct: 5 SVVFTLKNQLGDFTKKEKQVARFIIKYPQAVIDSNAKQVADQVGTSAATVIRLAKRVCKN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK L + +I D L ++ +K+ + T Sbjct: 65 GLPELKERLKNETMVNDKF-----FEEIDPADTLEVMKQKMEYRINHTIEQTNRTVKGGA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ A + GIGAS LVA + K ++G A +D+H L + S Sbjct: 120 VRNAAKLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVH--LLAAEMSKGRG 177 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNS 239 +++ IS +G +E + V+AIT + L ++++ L E S Sbjct: 178 VVVLISNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRS 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ + DLL+ + ++ E +++ S ++K Sbjct: 238 AATTSLMAQLYVVDLLYYSFLKLHFEDNVDQLTKSRKIIK 277 >UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYQ0_EXISA Length = 267 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 116/277 (41%), Gaps = 17/277 (6%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +I+ Y + S+KK+ADYL+ + A ++ LAN S ++ +F +K+G + Sbjct: 3 EQIKHVYSEMTGSEKKIADYLMANMNEAIEMNITDLANAIATSPGTITRFCKKIGVGSYS 62 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +LKL + + L + + + + + T ++ +++L Sbjct: 63 SLKLMMQKTLTETNLPQTTSLEP--------------MQRSYIELIQTTAHLIDQDELLA 108 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + S+R + L G+G +GLVAQ ++L ++G A D H+++ + +D+++ Sbjct: 109 ICKEITSSRSVHLYGLGNAGLVAQEMEYRLRRMGLLATTAFDSHSMVMDASIVTSEDVVI 168 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S +G RE+ A G +A G+ + L + + L T I+ Sbjct: 169 AFSNSGESREVVQAMQLAKESGCTTVAFVGYQHSPLAELVDYRLLTAGASGEAFL--INT 226 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 D + L++ + E + + +L Sbjct: 227 QLPLLFTADAVTKTLMETN-EALKAHYLQTLKALDRL 262 >UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YGT9_MOBAS Length = 305 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 120/282 (42%), Gaps = 6/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+RQ + ++D+ +AD LL D A S + +A AGVS+ SV++FA+ +G + Sbjct: 17 SLIDRMRQELPAMKRADRAVADALLENIDAATRSSVKAVAGRAGVSEPSVIRFARHMGCE 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L++ A S + + V + + + A+ + Sbjct: 77 GFSDFKIRLAQDYAIGRMYLSADYQHPAK---TGSDVAGHVYEATSQALASAFAQRDPAA 133 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ +RR+ G+ G+S VA +L ++ A+A D + T + D Sbjct: 134 LDRAADLIDGSRRVFCFGVGGSSANVAAEAENRLFRLDLAASATADAYKQRITAATAGKD 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNS 239 D+ L S TG R L +A + G ++A+T L A + +E+ Sbjct: 194 DVFLMFSVTGRPRSLIESARSAKQCGASIIAVT-TAGTPLAIEADVLIPLIAFDEEKFFY 252 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + Q + D L L + ++ ++ ++ ++ L Sbjct: 253 MPNRGRYGQLFILDCLATLLGGRRMKHISSKLWNARTMLADL 294 >UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=Ralstonia RepID=B2UK47_RALPJ Length = 280 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 7/232 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RIR L+ +++++AD++L QP T L +A EAGVSQ +V++F + +G Sbjct: 16 DLRERIRAARPSLSPAERQVADWVLRQPGTVLSLPVAAIAREAGVSQPTVIRFCRSMGCH 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL L++ A+ + + + +++++ A+ A + Sbjct: 76 GLSDFKLRLAQGNAAHDKPRGAAAPSNVPRSGT------RVLQDTIDALAAMRDRFDPLA 129 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V ++ +A RI L G G+SG+VA++ K + G A A D + + ++ D Sbjct: 130 LDAAVALVDTAHRIDLYGFGSSGVVARDAQTKFFRYGIPANAYSDPYLVSMSLNVLQAGD 189 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 +++AIS +G EL A + + +G V+A+T + L A L + Sbjct: 190 VVIAISKSGALPELQTAVERVRELGVHVIAVTA-PGSPLAALADVVLPADVD 240 >UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteobacteria RepID=B7LQI9_ESCF3 Length = 301 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 11/279 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I +R+ L ++K++A ++L A L +LA SQ+SV +FA+ LG K Sbjct: 20 DIISCITERFMALTATEKRIAQFILDDVPAAVELPIAELARLTQTSQASVTRFARALGCK 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK+ L+++LA + + + + + Sbjct: 80 DVRELKVKLAQSLAIGQRFILDVPDLDG---------VQGIYESIISVLETHRRSLDMNA 130 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V+ L AR+I+ G G S + +Q ++L ++G + D + A P Sbjct: 131 ISQAVSWLSQARQILALGTGGGSTICSQEIQYRLFRLGLPVVSQNDALMMRMMCSAVMPQ 190 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ +S G E+ +A + G +V+AIT L ++ L + +E Sbjct: 191 DVVIVLSLGGYTPEIIESAAIARQYGARVIAIT-PAQTPLAEQVDLVLPLLVQESDYIFK 249 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + +A + D+L L + A +R+R + ++ Sbjct: 250 PTPSRYAMLAMVDVLATELAMANKAQAKDRLRRIKLVLD 288 >UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X0S9_ENTFA Length = 285 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 121/285 (42%), Gaps = 4/285 (1%) Query: 1 MNGLLRIR--QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 MN L I ++ + ++ + D++L + H+S +LA S S++V+ +K Sbjct: 1 MNPLNLIECLEQKERYTYNEGLIIDFILSHTERVLHMSIYELAEATNSSTSTIVRLCKKT 60 Query: 59 GYKGFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 GF K+ LS L +V + D L+ +K+ + T + +T + Sbjct: 61 ETSGFKEFKIRLSRDLEIHYQAIRNVDANMPFLAQDSDLLIAKKIAQLTTETVQSTQQLL 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +E L++ + +L +A I+ G+ S + +F KL++I + + Sbjct: 121 TEAMLNKSIDLLLTAENILAVGVSNSYIRLTDFQTKLLRIQLFIHLIPYQAEQFYLAINA 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-A 236 + +D+ + +SY+G E+ A G ++AIT + L + A+ L E Sbjct: 181 TKNDVAILVSYSGNTAEIVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIPNVEHAD 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ S+ A + ++L+ + ++ + +++ + K Sbjct: 241 FKVSTFSSQLAIEYILNVLYSCIFSRNFDKNYTSQKNTPTSILKF 285 >UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM Length = 289 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 7/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L++S++KL +Y+L P +S+ L+ +S+ ++++F ++LG++G Sbjct: 6 ILTRIESLMPFLSKSEQKLGNYILTHPKDVTDMSTSALSQACDISEPTLIRFTRRLGFQG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL LS S + ++ +D + KL ++ +TLN L Sbjct: 66 YKDFKLHLSANFISNQIDSTPV---KVNLNDSAIEIYRKLASFTINSLNSTLNTLDANDL 122 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + A R+I L+G+GAS ++ F K+M++ D+H L Sbjct: 123 ENATNYIYVAAKQNRKIFLSGMGASTVLIHEFQIKMMRLNIQTIFFEDIHLRLEACANLK 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +DL + + G +E D K++ IT F + + ++A LYT E Sbjct: 183 KNDLFICFTTLGASKENYELIDIAHERKAKIIVITQFGNSQIAEKADIALYTSIIENNLR 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 AS ++ Q M+ D+LF+ + +D ++ K+L Sbjct: 243 LASQTSIILQSMVIDVLFLTIACKDYASITNSVKDFREKFKQL 285 >UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D4L1_GEOSW Length = 282 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 120/282 (42%), Gaps = 6/282 (2%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN I ++ ++++ +K+A Y+L P+ + +LA AGVS+++VV+FA LG Sbjct: 1 MNEVYRLIAEKLPEMSRAQRKIAKYVLNNPEAVPFFTVGKLAKMAGVSEATVVRFATFLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + G+P + A+ E++ Q + ++ D + + E + +E+ + A Sbjct: 61 FSGYPEWQQAMQESMKRQLTTVERLKISEEVYDSEDKSIFE-MFQEDIERIKAMSVQIDM 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ V + A+RI + ++ + + + NA +R+ H + + + Sbjct: 120 DLFYQAVQYITDAKRIFIIANRSAVSLGLFLEFYFDILFENAELIRNPHGISEKLFRLNK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ +S+ + A G K++ IT + L L E + Sbjct: 180 DDVVIGLSFARYTKSTIEAVAFAKDRGAKIIVITDHLLSPLVSYGDVTLCAPTEMPSF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I + A L + L + ++ + + E + ++ Sbjct: 238 --IDSFVAPLSLVNALITEVGRRKRSEVEKHLSDLEEIWERF 277 >UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R5_9FIRM Length = 314 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 118/283 (41%), Gaps = 5/283 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ Y + ++ +K+ADYL+ D + +LA +GVS +SV +F + +GYK Sbjct: 27 SVIPEIKSLYPQMNEAMQKIADYLIDTEDKKCVERASELARRSGVSTASVSRFVKMMGYK 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRG-DDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +L + + ++ + + + ++ + T + + Sbjct: 87 EFRDFRLKIVMEKQEENRQEENELNYNGEPITGDAHSICKTIFSKSVRELEETWGILDFD 146 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ ARRI++ G+G S + + +L +IG+ D H ++ Sbjct: 147 TMQTVADLIHEARRIVVIGVGRSKVTMEALYSRLYRIGYPIMMFSDAHEIVNITSIMEKK 206 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +S G + + A + G +V+ I+ + L + + + L++ + Sbjct: 207 DILICVSNFGQSKSVVEGARRAKKRGIQVVGISSIKESPLAKISDYTLFSAYDYNNAQDG 266 Query: 241 SI----SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ S AQ ++ D L++ + ++ + + Sbjct: 267 NLFDPSSENLAQLVIVDCLYMLVAHKNKRKNITYFKTFSNEIH 309 >UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D858_9CLOT Length = 275 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 112/257 (43%), Gaps = 6/257 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 ++R L +++ A+YLL LA EA VS+++VV+ K+GY G Sbjct: 12 KLRGVIGSLGAQERRFAEYLLNSFAGIEKEPIAVLAKEAQVSEATVVRVCHKMGYSGLKE 71 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK+ ++ + + + E++ A+ T+N+ E+++ + Sbjct: 72 LKIVVARENETAGSFDGGIGGQY------MDELKERVFMGAIRALQDTMNLIDEDEVEKA 125 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +L +A I + G+G S VA++ +LMK+G + + + + + D+ + Sbjct: 126 TKVLCNANYISIYGVGGSVPVARSLKHQLMKLGIPSNVYNEFQPTIIAAEKYNKGDVAIG 185 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++G ++ A G + IT + +A+ + +T +E + A Sbjct: 186 ISHSGESSQVVEALRIARGKGATTICITSYGDSAITHCSDVKFFTTSETLLNGGDNSLAR 245 Query: 246 HAQGMLTDLLFIALIQQ 262 AQ + +LL++ + + Sbjct: 246 IAQTSIINLLYLNVALK 262 >UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15N75_PSEA6 Length = 282 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 162/281 (57%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I+ L+ S+ KLA ++L + R LSSQ+LAN GVSQSSVVKFAQKLGY Sbjct: 1 MSTFTKIKAIKDTLSNSELKLAKFVLSSSNAVRDLSSQELANVVGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+PA KL + +AL S + +H +I +D + V EKL+ A + T N+N E Sbjct: 61 KGYPAFKLGVIDALNSTASEGN--LHGKITLNDSFKQVSEKLLSSKVAVLTETKNLNEEA 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 H+ V +L+SA+RI++ G+G S LV ++F++KL K+G A DMHA LA S + Sbjct: 119 AFHQAVELLKSAKRILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATLSEN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+ AIS +G RE+ + + KV+ +T + + A LY++AEE++ + Sbjct: 179 DLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESARLS 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI A AQ + D+LFIA+ Q + + + ++V Sbjct: 239 SIMARTAQEFIIDILFIAITQS-SRQGRQLLEKTNSVVSDF 278 >UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus RepID=C2KAY2_9LACO Length = 281 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 137/280 (48%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I Y L ++ K +AD +P + + Q+L S +SVV+F + LG+K Sbjct: 3 NLANKISDVYPNLNKTSKLIADVYFKEPRIFLNKNLQELGTITQTSGASVVRFCRNLGFK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF ++A ++ + ++ + I +D V KL + + Sbjct: 63 GFKDFQIACAQEMPNKQ---DAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKTIDHKS 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V ++RSA++I + G GASGL AQ+ +KL++ G N V+ H L V + +D Sbjct: 120 LDAAVDLMRSAQQIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKED 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+ SY+G+ +E L A + + K++A+T + L+ A + + E+ + Sbjct: 180 ILIVFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYGA 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ A+ + LL+++LI +LE +++ ++ L +L Sbjct: 240 INSLFAEIFASSLLYLSLISPNLEELNMKMKTTQNLTNQL 279 >UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XD02_9LACO Length = 294 Score = 222 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 114/282 (40%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++R++ + ++ ++K +A+YLL + + + +A + S S++++ KLG+ Sbjct: 1 MLIKDQLREK-KNMSNNEKIVANYLLKADENIEKDTVRTVAEKTYTSPSTIIRLCHKLGF 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K + + +V ++ R +D R V K+ + T V Sbjct: 60 TGFSDFKNKFLNEVKYFNLQFQNVDVNFPFRREDTAREVMSKITDLYIETIKDTEKVVDM 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L C + + I + G A +F K+MKIG +++ L + Sbjct: 120 RTLLRCRKICSESEEIHIFSYGTYLNQAYSFKEKMMKIGKKVMISSNLNYQLYEAEIMQA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D+ + ISY+G L A + + +AIT N L + LY +E N Sbjct: 180 GDIAIIISYSGETNNSLLIAKQCRKNNIPTIAITSIGENDLTKICDETLYISTKESLYKN 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S + + D+L+ + Q D E E + ++K Sbjct: 240 IGDYSIHLSVSYVLDVLYSLIFQNDFEHFYETKMNLAMSLEK 281 >UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAG5_FUSMR Length = 283 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 124/277 (44%), Gaps = 3/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L + Q + +++K+A ++L ++ + ++ + G S +S+ +F +K+G++ F Sbjct: 7 LFLLDQLLPSFSPAEQKIALFILENTFAVIDMTIEDMSEKIGTSVASISRFTKKIGFENF 66 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL +++ + S + I + + + + K N+A + ++ + +K+ Sbjct: 67 YLLKLGIAKEFVN---SSNKTISLNVNKNSNATDIYTNVAKTNSAILEESIEYFNTDKME 123 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E ++ +A I L +GASG++A+ +K +++G + + D H+ L D+ Sbjct: 124 EISEIILNANHIYLFAMGASGILAKESWYKFIRLGLKCSMIEDFHSQLLQASILDDTDVA 183 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 L S++G+ +++ + + + IT + Q CL+ + S Sbjct: 184 LIFSHSGINKDVLTLLEIINETPAYSIGITNYARTPFSQSVDICLFFSENSTPMDKVGFS 243 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ + L+ L + + + + + KK Sbjct: 244 SRIPQLIIIESLYRILSLKLGKKSKICQERYKQIFKK 280 >UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B715 Length = 282 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 124/277 (44%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I Y S+KK+A Y++ +++ L+ +G S++SV +F +++G K Sbjct: 4 NVIDEIYSSYDHFFDSEKKIAKYIMHHTSEVVNMTVGDLSQASGASEASVSRFCKRIGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK++L++ L S + I N+I D + + ++ + T+ + K Sbjct: 64 GFHHLKISLAQELVE-IPSCNTTISNRISITD-VNNSLDSILANKVEELTQTITMMKSNK 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E + + +R I +G + VA + +K +IG ++ + L + S +D Sbjct: 122 LDEILDCILKSRHIYFVAVGNTVPVALDGCFKFNQIGIPSSTSSILETELGMILNVSKED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + A E L+IT +++ + + + T E+ Sbjct: 182 MVIAISNSGESSGVLTAIKEAHNQKATTLSITNSDKSSIALESDYHITTATREKVYLEGY 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + ++L++ L E A E+ E L+ Sbjct: 242 CFSRVSATAVIEILYLFLT-TMKEDAHEKSAQHEDLI 277 >UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q9_9CLOT Length = 287 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 5/278 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLGYKG 62 L +I + Y L + K+LADY+L P + S L + + S++SVVKF + LG+ G Sbjct: 11 LAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVVKFYRLLGFDG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + K+ L++ L ++ S + I DD + +K+ +++ ++ + E + Sbjct: 71 FKSFKIKLAQELVNRTFYHS---ESDITIDDEPTEIKKKVFLGAMSSLSKNADIAAGECM 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +L SA+RII+ G GAS + Q ++L ++G N +D H A + P D+ Sbjct: 128 D-AQKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHPRPGDV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S +G +L + + + ITG +++ + + L T++EE+ + ++ Sbjct: 187 ILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNILTDAL 246 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +Q L D LF + + R++ + KK Sbjct: 247 NSRVSQFCLIDALFSMISIANANEMLPRLQDTRNTFKK 284 >UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A459_ENTGA Length = 268 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 127/266 (47%), Gaps = 8/266 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I L+ +D KLADY++ D ++S LA + S ++V++F++KLG+ Sbjct: 1 MSVVTTIESIKNELSTTDLKLADYIVENLDEIPTMTSNVLAVHSNTSPAAVIRFSKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KLAL++ + ++ + ++ I+ DD + K+++ N + AT + E+ Sbjct: 61 SKFSDFKLALTKDIENRIYNE----YSDIQNDDSFQTAKNKILRNNKMIIDATDPILDEQ 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V + A+RI + G+G S L A++ K +IG +D + L ++ D Sbjct: 117 TVQQVVDKMFHAKRIYVYGVGTSVLAAEDIRQKWTRIGKTVIFDKDRYLLTQQMKNDGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ----A 236 L IS++G R++ + +G L ++ N L ++ ++T E Sbjct: 177 SLFWGISHSGKNRDVLSLVEIAKSLGMPTLGMSQLGQNQLTKKVDTPIHTARTEDIKNGH 236 Query: 237 TNSASISACHAQGMLTDLLFIALIQQ 262 S + + Q + DLLF +++ Sbjct: 237 YGSGATHSIILQIVTIDLLFYFYMRR 262 >UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C459_LISGR Length = 284 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 4/271 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I+ ++K +ADY+L L+ Q+LA + S +S+++F +KLG G Sbjct: 2 LLQKIKT-MTNFTNTEKVIADYILANTANMEQLTIQELARKTYTSHASIIRFTRKLGLDG 60 Query: 63 FPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + K+ L + + + + DD + + ++++ + + ++ E+K Sbjct: 61 FKSFKIELLKTNQQENHVLSEINPNIPFEHDDSILKISREMMELTQQTITESYHLLDEQK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L A+RI L +G S + A++F KL KI A D + +D Sbjct: 121 LFQATRQLYDAKRIFLFALGDSQIRAESFQNKLWKINQYAILATDRSEWAVHTANITSED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE--QATNS 239 L ISY AA+ + G ++ +T + L + A C+ E Sbjct: 181 CALFISYDAKSPHDITAAEWLKSRGVPIILLTSHITSKLSKIADICIAVPNLEDKSELKI 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPER 270 A+ ++ A + +++F L Q D E + Sbjct: 241 ATFASQIAFDYILNVIFSTLYQIDYEKNKDY 271 >UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J381_DEIGD Length = 286 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 12/253 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L R+ L + +++A Y++ P+ + + +LA AGV +S+V + ++LG+ Sbjct: 18 SALARLHAERAQLPPTLERIAAYVVAHPEEVIYQTITELAATAGVVESAVTRLCRRLGFS 77 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF A K+ALS ++ + + ++ A+ T V Sbjct: 78 GFHAFKIALSGDVSQAQGAAEATDPFSVA------------ARQAVQAIEGTRQVADPAA 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + +A R+ + G SGL AQ A KL ++G A A D H SP Sbjct: 126 LERVAQAIAAATRVDVVGQSNSGLSAQFLANKLARVGVPAFAYTDPHLAAVAAATQSPRG 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ + +G + G +A+T + + + A L T + E + Sbjct: 186 VVVGFTRSGSTIDTVQTLRLAASKGACTVAVTHRASSPVTRYAREVLATSSPESPLAGGA 245 Query: 242 ISACHAQGMLTDL 254 +S+ +Q +L + Sbjct: 246 LSSLVSQVLLVEA 258 >UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=Q71W74_LISMF Length = 283 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 2/277 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L++IR+ L S+K+LA+Y+L P ++LA A VS +++ + KLG Sbjct: 1 MNILIKIRE-LTNLTNSEKELANYILANPKKTLQCKPKELATAAFVSAATIYRLINKLGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK+ ++ +L E + I D + L + + TLN E Sbjct: 60 NGIGELKIEIASSLRETNEEKDLNYDYPILESDTPYQIMTNLNQIYKGTIDETLNNADPE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L A+ I + A+ AQNF +++ +IG + + + S + Sbjct: 120 ELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAANSDEN 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS- 239 + + +SY G R L + ++ IT N L + A+H +Y + E N Sbjct: 180 HIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENHYNKV 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 +S S + + D L+ Q+ E + + Sbjct: 240 SSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQ 276 >UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK66_PROMI Length = 283 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 8/284 (2%) Query: 1 MNGLLRIRQRYQGLA----QSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 M+ L + + + L ++++LA YLL D +++ +LA +AGVS +SV++F++ Sbjct: 1 MSTLTK---KLENLRLQGKGTEQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSR 57 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 ++GY G+P K+ Q +S S ++ + D + K T A+ ++ + Sbjct: 58 QMGYGGYPEFKIDYLSE-EKQQKSSSDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIAL 116 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 + + SA+RI+L G+GAS +VA + KL+++ N D+HA LA Sbjct: 117 LDAATIDLLAEKMISAKRIVLFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSAN 176 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 S DDL +A++ G ++N + G +A+T F + + A++ L +EQ Sbjct: 177 LSADDLAIAVTARGNTADINRMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQH 236 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + I+ Q + D+LF + A + + V + Sbjct: 237 SQLGVITPQVLQMVAFDVLFFKYMTLAKGSAEKALLKGRQAVMQ 280 >UniRef50_Q38V38 Putative transcriptional regulator with a sugarisomerase domain, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38V38_LACSS Length = 276 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 126/278 (45%), Gaps = 9/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+Q+Y L+ ++K+A ++ + + + + +LA E VS S++ +F +K+G Sbjct: 1 MAIIEHIKQQYSFLSPQEQKVALAVIQKGASIQRIGIDELAAELQVSNSTISRFVRKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F KL SE P + D ++ + + T + Sbjct: 61 QNFVDFKLQFSE-------GPQPTMTGVQGQVDHESQTSVEIYQFYQDVITKTQARIKQA 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V+ +++++++ + G+G+SG F +L ++G A V + H +L T + + Sbjct: 114 DLDQLVSWIKTSQQLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRIINKT 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G E+N A G K AIT T + L + L+ ++ Sbjct: 174 DLVIGLSNSGNTEEVNQAVQNARENGAKTAAITSGTDSPLAAASDLTLFVEDSIGFASAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ A + D+L + L++ E R++ + + Sbjct: 234 FVNSQFALTYVIDILAMLLLED--EQYNWRMKQTVDTI 269 >UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=Proteobacteria RepID=Q0BBX6_BURCM Length = 324 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI + L ++++K+A Y+L A H S LA +AGVS ++V +FA+ +G + Sbjct: 38 DIVARIAECAPELREAERKVAAYILADLARAAHASIGALARDAGVSVATVTRFAKAVGCR 97 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK+ +++A A + P +V +++ A+ + Sbjct: 98 DVRELKVLVAQAAAVGQRFLVPSDAHPAEDASPASVVYDEI----RVALAHNHQLLRNTS 153 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L A+ + + G G S +A ++L++ G A+ +D S D Sbjct: 154 FDAAADLLAGAKMVYVYGQGGGSTALADELRFRLVRFGRPVASYQDSLLQRMVAATLSRD 213 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++A+S +G EL + R G ++AIT + L + A H + +A E Sbjct: 214 AVVVALSVSGRVPELLESCRLAKRYGATLIAITA-PASPLAKLADHLIPVVAFETDFIYK 272 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +A M D+L + + + E +R + + Sbjct: 273 PSTSRYAMMMAIDVLVTGVALRLGDAGRESLRRIKHALD 311 >UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=Micrococcineae RepID=A9WVK2_RENSM Length = 346 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 2/249 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R++ + ++ + K+A YL+ +P LS ++LA+E G S ++V +F + +GY Sbjct: 36 GVVNRLKAQLPEMSGAMSKIARYLIEKPLAPLELSIKELADETGTSAATVTRFCRLIGYT 95 Query: 62 GFPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ ++ ++ L ES I DD R V L+ + ++ T V Sbjct: 96 GYAPFRVGVASDLGRSDARESWKTDIGRAFGPDDSPRDVLSTLMNAHARSLQETAAVLDL 155 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + + + GIG S ++A+ +L +IG +++A L + + Sbjct: 156 RLMKNLARRIALSEHVDIYGIGGSAVMAKELQNRLYRIGIPCHHCTEVYAGLTSASLQNS 215 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + IS TG E + G +A++ + L + A + T EQ Sbjct: 216 QCIAIGISNTGRTEETIQMLRQAGLAGATTVALSNNPNSTLAESADFQITTSVHEQFLQP 275 Query: 240 ASISACHAQ 248 +SA H Q Sbjct: 276 DDLSAKHVQ 284 >UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTD9_9FIRM Length = 282 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 129/278 (46%), Gaps = 7/278 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I++ Y G++ S KK+A+YLL D A L++++L GVS+++V++FA L YK Sbjct: 4 SLVKNIQEHYHGMSASHKKIAEYLLDHYDKAVFLTAKELGQTLGVSEATVIRFAVALNYK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL + + ++ + ++ D + K + + + + T+ + Sbjct: 64 GYPELQQALQDMVKNKITTVERL---RLALLDGQTNLPHKALSTDISNIQLTMEEVTSAD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + AR I + + ++ + + L + N+ + + ++ + P D Sbjct: 121 FEKAVNEIIQARNIYIVSLRSATALGYFLHFYLQLLLQNSRLIHGVGTFFEEIRPAGPGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS+ R+ G +VLAIT + L + H L +++ + Sbjct: 181 LVIGISFPRYTRQTVEGLKYARENGARVLAITDSLTSPLAPYSHHVLTARSQQISF---- 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I + A L + L +A+ +D + +R EA+ + Sbjct: 237 IDSFAAPLSLINALILAVGARDSAKTADVLRQMEAVWE 274 >UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T6_9FIRM Length = 277 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 6/275 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++Q L Q++K +AD+ AR +S QLA+ + QS++++F++KLGY+ F Sbjct: 4 EKLKQVQNELTQTEKIIADFFQNHSLEARSFTSYQLADRLNIGQSTIIRFSKKLGYRSFR 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L LS +L + + +I ++ +K+I++ TL N + + + Sbjct: 64 ELLEDLSTSLTEEK------VKEEIVVNEGTSSTNQKIIQQYQKMAQLTLEFNPPQVIDQ 117 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+ L+ AR+II+ G G S L A+ + + +K+G ++ + H + + + P D+L Sbjct: 118 TVSALKKARKIIVFGFGNSNLFAEYISNQWLKMGLDSFCSANSHIIFSMLSQFGPQDVLF 177 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G E+ AA V+A+T N L + L T+ E T +++ Sbjct: 178 LISESGETPEILKAARIAGHQNVTVIAMTRIQKNRLHGYSDIVLKTVNYETNTRLNAMTL 237 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +Q L D++++ L + D E + I SE L+ Sbjct: 238 RCSQLCLLDMIYLNLYKTDFEHYEKIIAESEKLLD 272 >UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU4_9MOLU Length = 285 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 129/281 (45%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + +G + +K +A+Y++ + ++ +LA S +++ +F +KLG Sbjct: 1 MSLLSKL-EYKKGFSDIEKGIANYIIDHKEEVANMRLVELAEATFTSTATISRFCKKLGE 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K + + K+ + ++ + ++ V + + +D ++ V +L + + AT + + Sbjct: 60 KNYNSFKINFASSVLTSYQT-DVDYNRPFKENDSIQEVTNQLGELYKDTIEATKALLDYD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L I + +GAS L F +++ I + + + Sbjct: 119 VLNQVIEKLLKTSVIDIFAVGASYLSGLLFEHRMISIDHFVNFKSSPNDQDKRSLFVNKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NS 239 + + ISY+G E+ D ++ G ++AIT + L++RA++CL ++E Sbjct: 179 TVAIVISYSGESHEIKTIVDRIVDNKGTIIAITSINDSYLRKRANYCLTMCSKENIVSKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + S+ + L DL+F L Q+D R + E +K Sbjct: 239 ETYSSKLSSDYLMDLIFSILFQKDYYPNLIRKINCEQKYEK 279 >UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus casseliflavus RepID=C9A857_ENTCA Length = 297 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 126/281 (44%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++R +GL ++K++ADY+L + L+ + +A S SSV++ A+K+GY Sbjct: 1 MLLGDKLR-LQEGLTNTEKRIADYILQNINDVPSLTIEVIAKHTYTSHSSVIRLAKKMGY 59 Query: 61 KGFPALKLALSEALASQPESPS-VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF + +L L+E +Q +P+ V + D + +K+ +++ T + Sbjct: 60 EGFKSFRLGLAEIAHNQMFNPTFVDANFPFSPKDQTPDILKKMADLTINSIHKTHAQVAP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + V L +A+RI L G S + A++F KL+KI + + Sbjct: 120 EMMEAVVQSLEAAQRIFLFARGDSQIRARSFQNKLVKINKYLILADEYGDDAWNASNVTQ 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 +D + I+Y G + VG V+ I+G + A+H + +E+ Sbjct: 180 NDCAVFITYRGKNTQYEKIMQHFRDVGVPVIVISGNAHAKIIPLATHAIIASHDERDFLK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + S+ A + D LF L ++ + +R + +++ Sbjct: 240 VGTFSSQVAFEYILDSLFALLYAKEYQKNIVELRKKQTVLE 280 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.184 0.526 Lambda K H 0.267 0.0563 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,970,503,853 Number of Sequences: 3077464 Number of extensions: 104298950 Number of successful extensions: 400711 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3685 Number of HSP's successfully gapped in prelim test: 763 Number of HSP's that attempted gapping in prelim test: 392244 Number of HSP's gapped (non-prelim): 4991 length of query: 282 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 155 effective length of database: 649,558,428 effective search space: 100681556340 effective search space used: 100681556340 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.0 bits)