20 c3rjtA_ Probab=82.40   E-value=3.6  Score=20.60  Aligned_columns=160  Identities=16%

Q ss_pred             HHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             89999984467883899952637861220887765555644333333557861589999999999720689728999985
Q batch____        99 IARKLLPFIPDNAGILIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRTRAALAKNPQNKFLGACWM  178 (326)
Q Consensus        99 Fgr~L~~~lp~~vpIgLI~~A~GGtsi~~w~~~~~~~~~~~~~~~~~~~~gg~lY~~~i~~~k~Al~~~~~~~i~GilW~  178 (326)
                      +++.|....+ +..+-.+.++.+|..                            ...+..+.+.......+-.+   ++.
T Consensus        40 ~~~~l~~~~~-~~~~~~~n~~~~g~~----------------------------~~~~~~~~~~~~~~~~~~~~---~~~   87 (213)
T c3rjtA_          40 VDAHLQVLHP-DWRIRVVNVGTSGNT----------------------------VADVARRWEDDVXALQPDYV---SLX   87 (213)
T ss_dssp             HHHHHHHHCG-GGCCEEEECCCTTCC----------------------------HHHHHHHHHHHTGGGCCSEE---EEE
T ss_pred             HHHHHHHHCC-CCCEEEEECEECCCC----------------------------HHHHHHHHHHHHHCCCCCEE---EEC
T ss_conf             9999830158-861589802004787----------------------------88898522212102588744---631


Q ss_pred             ECCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCCCCCCC
Q ss_conf             05342-----------3466634799999999999997613100112333588689873012100112223332112222
Q batch____       179 QGEFD-----------LMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNNITDAPWFCGDTTWYWKENFPHSYEAIYGNYQ  247 (326)
Q Consensus       179 QGEsD-----------~~~~~~a~Y~~~l~~lI~~~R~DL~~~~~~~~~~~~~P~~~ge~~~~~~~~~~~~~~~~~~~~~  247 (326)
                      -|-+|           .......+|.++++.||+.+|+....           ++++....+........+.....-...
T Consensus        88 ~g~nd~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~-----------~~i~~~~~~~~~~~~~~~~~~~~~~~~  156 (213)
T c3rjtA_          88 IGVNDVWRQFDXPLVVERHVGIDEYRDTLRHLVATTKPRVRE-----------XFLLSPFYLEPNRSDPXRKTVDAYIEA  156 (213)
T ss_dssp             CCHHHHHHHHHSTTCGGGCCCHHHHHHHHHHHHHHHGGGSSE-----------EEEECCCCCCCCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-----------CEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             455320136776765455889999999999999999971897-----------179982478887520357899999888


Q ss_pred             CCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHH
Q ss_conf             332344024320456765556511332211000001110136655346777610036898777779999999
Q batch____       248 NNVLANIIFVDFQQQGERGLTNAPDEDPDDLSTGYYGSAYRSPENWTTALRSSHFSTAARRGIISDRFVEAI  319 (326)
Q Consensus       248 ~~~~~n~~~~~~~~~g~~~~~~~~~e~p~~~~~~~~~~a~~s~~~~~~~~~~~Hf~~~~~r~~ig~r~a~a~  319 (326)
                      ........-+.+.+.............+..                 ...|..|++..+++ +|.+.+++++
T Consensus       157 ~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~-----------------~~~DgiHPn~~G~~-~iA~~i~~al  210 (213)
T c3rjtA_         157 XRDVAASEHVPFVDVQAEFDRLLAHLNTWV-----------------LAPDRVHPYLNGHL-VIARAFLTAV  210 (213)
T ss_dssp             HHHHHHHHTCCEECHHHHHHHHHTTSCHHH-----------------HCSSSSSCCHHHHH-HHHHHHHHHT
T ss_pred             HHHHHHHCCCEEEECHHHHHHCCCCCCHHH-----------------HCCCCCCCCHHHHH-HHHHHHHHHC
T ss_conf             776555419758647688640223369655-----------------12588571889999-9999999962