66 c1atiA_ Probab=99.02   E-value=6.6e-09  Score=71.99  Aligned_columns=118  Identities=17%

Q ss_pred             HHHHHHHHHHHHHHH--HHCCCEEECCCEEEE---------------------CCCCCCCCEEEE---ECCCCCCEEEEE
Q ss_conf             999999999999999--728847923970340---------------------578887631675---314688204750
Q batch____       184 FVVRSKILAAIRQFM--VARGFMEVETPMMQV---------------------IPGGASARPFIT---HHNALDLDMYLR  237 (505)
Q Consensus       184 l~~Rs~i~~~iR~fl--~~~gF~EVeTPiL~~---------------------~~~g~~a~~F~t---~~~~~~~~~yL~  237 (505)
                      ++++.+|...+|+-+  .+.||.||.||+|.+                     .........|.+   +.+..+...+|+
T Consensus        39 ~~v~~~i~~~~r~~~v~~~~g~~ev~~P~l~~~elw~~Sg~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr  118 (437)
T c1atiA_          39 VELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNWTPPRYFNMMFQDLRGPRGGRGLLAYLR  118 (437)
T ss_dssp             HHHHHHHHHHHHHHHTTSCSSEEEECCCSEEETTHHHHTSHHHHCEEEECCCCCCCEEEECBEEEECSSCCCGGGEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCEEEEC
T ss_conf             99999999999998642325976643477668889976485100284442013453221002321035555544312323


Q ss_pred             CCCH-----HHHHHHHHCCCC---CEEEEEEEEECCCCCCC----CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf             7837-----999999842368---43999744546899876----078502677764079899999999999999999
Q batch____       238 IAPE-----LYLKRLVVGGFE---RVFEINRNFRNEGISVR----HNPEFTMMELYMAYADYHDLIELTESLFRTLAQ  303 (505)
Q Consensus       238 ~Spq-----l~lq~liv~g~~---rVfeI~~~FR~E~~~~~----H~pEFt~le~e~af~d~~d~m~~~E~li~~i~~  303 (505)
                      ....     .|.+.+..+.=+   |+||||++||+|.+ .+    +..||||.|+| .|.+-+.......+++.....
T Consensus       119 p~~~~~~~~~~~~~~~~~~~~LP~~lyqig~~fR~E~~-~r~Gl~R~REF~q~D~~-~F~~~~~~~~~~~~~~~~~~~  194 (437)
T c1atiA_         119 PETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEIT-PRNFIFRVREFEQMEIE-YFVRPGEDEYWHRYWVEERLK  194 (437)
T ss_dssp             SSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSS-CCTGGGSCSEEEEEEEE-EEECGGGHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCC-CCCCCCCHHHEEEECEE-EECCHHHHHHHHHHHHHHHHH
T ss_conf             77888999998989874126697789888844317876-66765220230010111-011888999999999999999