Phyre 2 alignment of P06989 with c3a4cA_

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Job Description | P06989
Confidence | 9.70% | Date | Thu Jan 5 10:59:47 GMT 2012
Rank | 57 | Aligned Residues | 32
% Identity | 16% | Template | c3a4cA_
PDB info | PDB header:cell cycle, replication | Chain: A: PDB Molecule:dna replication factor cdt1; | PDBTitle: crystal structure of cdt1 c terminal domain
Resolution | 1.89 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | E | A | S | D | L | M | Y | H | L | L | V | L | L | Q | D | Q | G | L | D | L | T | T | V | I | E | N | L | R | K | R | H | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | L | A | R | V | L | R | N | V | F | V | S | E | R | K | P | A | L | T | M | E | V | V | C | A | R | M | V | D | S | C | Q
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 468 | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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