18/01/2012 10:19:16 : INFO  : Run start: Wed Jan 18 10:19:16 GMT 2012
18/01/2012 10:19:16 : INFO  : Initialised job
18/01/2012 10:19:16 : INFO  : Renaming log file 'phyre2_20120118_101916.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/phyre_20120118_101916.log'
18/01/2012 10:19:16 : INFO  : Initialised job:
Sequence
>batch____
MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQR
LWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQ
LLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHL
LVLLQDQGLDLTTVIENLRKRHQ

18/01/2012 10:19:16 : INFO  : Checked sequence
18/01/2012 10:19:16 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 10:19:16 : INFO  : PSI-BLAST 3 iterations
18/01/2012 10:21:12 : INFO  : PSI-BLAST 5 iterations
18/01/2012 10:22:43 : INFO  : Finished PSI-BLAST
18/01/2012 10:22:43 : INFO  : Running Buildali to generate a3m file
18/01/2012 10:27:57 : INFO  : Converting to HMM
18/01/2012 10:27:57 : INFO  : Calibrating HMM
18/01/2012 10:28:03 : INFO  : Searching HMM database
18/01/2012 10:32:26 : INFO  : Finished buildali
18/01/2012 10:32:26 : INFO  : Predicting secondary structure
18/01/2012 10:32:27 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 10:32:27 : INFO  : Predicting Disordered regions
18/01/2012 10:32:27 : INFO  : Predicted Disorder (Disopred)
18/01/2012 10:32:27 : INFO  : Running memsat_svm check
18/01/2012 10:36:54 : INFO  : Globular protein
18/01/2012 10:36:54 : INFO  : Predicted Transmembrane (memsat_svm) ID '5e0299ff3582fa48'
18/01/2012 10:36:54 : INFO  : Initialising fold library search
18/01/2012 10:36:54 : INFO  : Initialised search input
18/01/2012 10:36:54 : INFO  : Building Ensemble models
18/01/2012 10:36:55 : INFO  : Building hh.d1zpsa1.model.1.pdb
18/01/2012 10:36:55 : INFO  : Building hh.d2a7wa1.model.2.pdb
18/01/2012 10:36:55 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/hh.d2a7wa1.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/d2a7wa1.2.pdb
18/01/2012 10:36:55 : INFO  : Building hh.c2a7wF_.model.3.pdb
18/01/2012 10:36:56 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/hh.c2a7wF_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/c2a7wF_.3.pdb
18/01/2012 10:36:56 : INFO  : Building hh.d1yvwa1.model.4.pdb
18/01/2012 10:36:56 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/hh.d1yvwa1.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/d1yvwa1.4.pdb
18/01/2012 10:36:56 : INFO  : Building hh.c1yvwD_.model.5.pdb
18/01/2012 10:36:56 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/hh.c1yvwD_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/c1yvwD_.5.pdb
18/01/2012 10:36:57 : INFO  : Building hh.d1y6xa1.model.6.pdb
18/01/2012 10:36:57 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/hh.d1y6xa1.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/d1y6xa1.6.pdb
18/01/2012 10:36:57 : INFO  : Building hh.d1yxba1.model.7.pdb
18/01/2012 10:36:57 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/hh.d1yxba1.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5e0299ff3582fa48/d1yxba1.7.pdb
18/01/2012 10:36:57 : INFO  : Building d1zpsa1.1.pdb
18/01/2012 10:36:58 : INFO  : Building d2a7wa1.2.pdb
18/01/2012 10:36:58 : INFO  : Building c2a7wF_.3.pdb
18/01/2012 10:36:59 : INFO  : Building d1yvwa1.4.pdb
18/01/2012 10:36:59 : INFO  : Building c1yvwD_.5.pdb
18/01/2012 10:36:59 : INFO  : Building d1y6xa1.6.pdb
18/01/2012 10:37:00 : INFO  : Building d1yxba1.7.pdb
18/01/2012 10:37:00 : INFO  : Building c3crcB_.8.pdb
18/01/2012 10:37:00 : INFO  : Building c2yxhB_.9.pdb
18/01/2012 10:37:01 : INFO  : Building d1vmga_.10.pdb
18/01/2012 10:37:01 : INFO  : Building d2a3qa1.11.pdb
18/01/2012 10:37:01 : INFO  : Building c3obcB_.12.pdb
18/01/2012 10:37:01 : INFO  : Building d2gtad1.13.pdb
18/01/2012 10:37:02 : INFO  : Building c2q4pA_.14.pdb
18/01/2012 10:37:02 : INFO  : Building d2gtaa1.15.pdb
18/01/2012 10:37:02 : INFO  : Building c2q9lA_.16.pdb
18/01/2012 10:37:03 : INFO  : Building d2oiea1.17.pdb
18/01/2012 10:37:03 : INFO  : Building c2yf3F_.18.pdb
18/01/2012 10:37:04 : INFO  : Building c2rfpA_.19.pdb
18/01/2012 10:37:04 : INFO  : Building c2p06A_.20.pdb
18/01/2012 10:37:08 : INFO  : Finished HH model building
18/01/2012 10:37:08 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 10:37:12 : INFO  : html domain output complete ID '5e0299ff3582fa48'
18/01/2012 10:44:21 : INFO  : Run end  : Wed Jan 18 10:44:21 GMT 2012
