BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (317 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P23485 Protein fecR n=30 Tax=Enterobacteriaceae RepID=F... 643 0.0 UniRef50_Q14F31 FecR (Fragment) n=6 Tax=Enterobacteriaceae RepID... 319 7e-86 UniRef50_Q4KED4 Sigma factor regulatory protein FecR n=2 Tax=Pse... 248 2e-64 UniRef50_C3K1F9 Putative iron transport-related protein n=1 Tax=... 217 3e-55 UniRef50_C1DFE7 Anti-sigma factor, FecR family n=2 Tax=Pseudomon... 210 5e-53 UniRef50_Q1GXU4 Putative FecR n=1 Tax=Methylobacillus flagellatu... 209 9e-53 UniRef50_A6T3T9 Fe2+-dicitrate sensor, membrane component n=1 Ta... 206 6e-52 UniRef50_B3PJT3 Transmembrane sensor n=1 Tax=Cellvibrio japonicu... 206 7e-52 UniRef50_B0KIL8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas... 206 1e-51 UniRef50_Q7N8I4 Similarities with probable transmembrane sensor ... 199 2e-49 UniRef50_A6T3T5 Fe2+-dicitrate sensor, membrane component n=2 Ta... 198 2e-49 UniRef50_A6T0J4 Fe2+-dicitrate sensor, membrane component n=1 Ta... 197 3e-49 UniRef50_B0KIR0 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 195 2e-48 UniRef50_A6SVZ8 Fe2+-dicitrate sensor, membrane component n=1 Ta... 193 5e-48 UniRef50_C6CDZ5 Anti-FecI sigma factor, FecR n=5 Tax=Enterobacte... 192 2e-47 UniRef50_B0KPG4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 191 3e-47 UniRef50_C6XBX8 Anti-FecI sigma factor, FecR n=2 Tax=Betaproteob... 190 7e-47 UniRef50_B0KJM3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 188 3e-46 UniRef50_C6XE50 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 187 3e-46 UniRef50_A9BWH6 Anti-FecI sigma factor, FecR n=2 Tax=cellular or... 187 5e-46 UniRef50_A6V0K5 Probable transmembrane sensor n=6 Tax=Pseudomona... 187 5e-46 UniRef50_B0KMC8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas... 187 6e-46 UniRef50_A9BW97 Anti-FecI sigma factor, FecR n=1 Tax=Delftia aci... 186 1e-45 UniRef50_Q82VT5 Putative transmembrane sensor n=1 Tax=Nitrosomon... 184 3e-45 UniRef50_A6SXC7 Fe2+-dicitrate sensor, membrane component n=1 Ta... 184 3e-45 UniRef50_A9C159 Anti-FecI sigma factor, FecR n=2 Tax=cellular or... 184 4e-45 UniRef50_B3PJT6 Transmembrane sensor n=1 Tax=Cellvibrio japonicu... 183 6e-45 UniRef50_B0KG70 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonad... 183 6e-45 UniRef50_A9C156 Anti-FecI sigma factor, FecR n=3 Tax=Comamonadac... 183 7e-45 UniRef50_Q02NL2 Possible Fe2+-dicitrate sensor n=1 Tax=Pseudomon... 181 3e-44 UniRef50_A6T180 Fe2+-dicitrate sensor, membrane component n=3 Ta... 180 5e-44 UniRef50_A6SXA7 Fe2+-dicitrate sensor, membrane component n=1 Ta... 179 1e-43 UniRef50_B4WXE6 Sigma factor regulatory protein, FecR/PupR famil... 179 1e-43 UniRef50_A5VYE0 Anti-FecI sigma factor, FecR n=4 Tax=Pseudomonas... 179 1e-43 UniRef50_A6SX53 Fe2+-dicitrate sensor, membrane component n=1 Ta... 178 3e-43 UniRef50_C6DJA8 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacter... 178 3e-43 UniRef50_B7VAW3 Probable transmembrane sensor n=7 Tax=Pseudomona... 177 5e-43 UniRef50_UPI00016AFA6E putative FecR protein n=1 Tax=Burkholderi... 174 5e-42 UniRef50_B4X4W9 Sigma factor regulatory protein, FecR/PupR famil... 171 2e-41 UniRef50_B7WXN1 Anti-FecI sigma factor, FecR n=2 Tax=Comamonas t... 171 4e-41 UniRef50_B0KNB6 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 170 5e-41 UniRef50_Q88Q30 Transmembrane sensor, putative n=1 Tax=Pseudomon... 170 6e-41 UniRef50_B8ECR9 Anti-FecI sigma factor, FecR n=3 Tax=Shewanella ... 169 1e-40 UniRef50_A6VD04 Probable transmembrane sensor n=6 Tax=Pseudomona... 168 2e-40 UniRef50_Q4KBG4 Sigma factor regulatory protein, FecR/PupR famil... 168 2e-40 UniRef50_B8L6A8 Sigma factor regulatory protein, FecR/PupR famil... 167 5e-40 UniRef50_D0J628 Putative FecR n=1 Tax=Comamonas testosteroni CNB... 167 5e-40 UniRef50_A4VS46 Probable transmembrane sensor n=1 Tax=Pseudomona... 167 5e-40 UniRef50_Q82SB2 Putative transmembrane sensor n=1 Tax=Nitrosomon... 165 2e-39 UniRef50_Q39ES0 Putative FecR n=1 Tax=Burkholderia sp. 383 RepID... 164 3e-39 UniRef50_A1K836 Putative transmembrane sensor n=1 Tax=Azoarcus s... 164 5e-39 UniRef50_C9NLK7 Transmembrane sensor n=1 Tax=Vibrio coralliilyti... 162 1e-38 UniRef50_C6XBX0 Anti-FecI sigma factor, FecR n=4 Tax=Proteobacte... 162 2e-38 UniRef50_C3K7W7 Putative iron uptake regulator protein n=2 Tax=P... 161 3e-38 UniRef50_A3NJI2 Sigma factor regulatory protein, FecR/PupR famil... 158 2e-37 UniRef50_A9BUB2 Anti-FecI sigma factor, FecR n=5 Tax=Proteobacte... 158 3e-37 UniRef50_A6SZM2 Fe2+-dicitrate sensor, membrane component n=1 Ta... 157 4e-37 UniRef50_Q1LER3 Putative FecR n=1 Tax=Cupriavidus metallidurans ... 157 5e-37 UniRef50_Q48ML1 Sigma factor regulatory protein, FecR/PupR famil... 157 5e-37 UniRef50_Q88IB4 Transmembrane sensor, putative n=3 Tax=Pseudomon... 156 1e-36 UniRef50_B0KIQ3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 155 1e-36 UniRef50_C1DJ04 Anti-sigma factor, FecR family n=1 Tax=Azotobact... 154 3e-36 UniRef50_D0S2I9 Transmembrane sensor n=1 Tax=Acinetobacter calco... 154 4e-36 UniRef50_Q4ZTA2 FecR protein n=11 Tax=Pseudomonas RepID=Q4ZTA2_P... 154 4e-36 UniRef50_A1BCE6 Putative FecR n=2 Tax=Proteobacteria RepID=A1BCE... 153 7e-36 UniRef50_A6T3S7 Fe2+-dicitrate sensor, membrane component n=4 Ta... 153 9e-36 UniRef50_Q4ZM65 FecR protein n=23 Tax=Pseudomonas RepID=Q4ZM65_P... 151 3e-35 UniRef50_UPI00016A4649 FecR family protein n=2 Tax=Burkholderia ... 149 1e-34 UniRef50_Q4KKG0 Sigma factor regulatory protein, FecR/PupR famil... 149 2e-34 UniRef50_Q887T2 Regulatory protein, putative n=4 Tax=Pseudomonas... 148 2e-34 UniRef50_B7X231 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas t... 148 3e-34 UniRef50_C6D936 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacter... 147 4e-34 UniRef50_Q2KXL7 Regulator of iron dicitrate transport (Fragment)... 147 4e-34 UniRef50_B0KLJ0 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonad... 147 6e-34 UniRef50_A6W1Y1 Anti-FecI sigma factor, FecR n=1 Tax=Marinomonas... 146 1e-33 UniRef50_C6X944 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 145 2e-33 UniRef50_A6SZL9 Fe2+-dicitrate sensor, membrane component n=1 Ta... 144 4e-33 UniRef50_A9BW91 Anti-FecI sigma factor, FecR n=1 Tax=Delftia aci... 144 4e-33 UniRef50_A6SZL6 Fe2+-dicitrate sensor, membrane component n=1 Ta... 141 3e-32 UniRef50_B7X445 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas t... 138 2e-31 UniRef50_A9IDD5 Transmembrane sensor n=1 Tax=Bordetella petrii D... 137 5e-31 UniRef50_Q82WX3 Putative transmembrane sensor n=1 Tax=Nitrosomon... 136 8e-31 UniRef50_C6XBM0 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 135 2e-30 UniRef50_C6X948 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 134 3e-30 UniRef50_Q13G72 Putative FecR n=1 Tax=Burkholderia xenovorans LB... 131 3e-29 UniRef50_Q6FBE6 Membrane bound regulator in multi-component regu... 130 6e-29 UniRef50_B7X004 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas t... 130 7e-29 UniRef50_Q4KDP8 Sigma factor regulatory protein PupR n=2 Tax=Pse... 126 9e-28 UniRef50_Q4KAZ6 Sigma factor regulatory protein, putative n=1 Ta... 126 1e-27 UniRef50_B0KIR3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 125 2e-27 UniRef50_C1DGX1 Anti-sigma factor, FecR-like protein n=1 Tax=Azo... 125 2e-27 UniRef50_C1DGN9 PupR/FecR-like anti-sigma factor protein n=1 Tax... 125 2e-27 UniRef50_Q4KE62 Sigma factor regulatory protein, FecR/PupR famil... 124 3e-27 UniRef50_C4SII2 Fe2+-dicitrate sensor, membrane component n=2 Ta... 123 8e-27 UniRef50_B6IXY0 Sigma factor regulatory protein, FecR n=1 Tax=Rh... 121 3e-26 UniRef50_B0KMC5 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 119 1e-25 UniRef50_Q3SUQ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb... 119 2e-25 UniRef50_Q1IGG4 Putative FecR-like transmembrane sensor n=2 Tax=... 118 3e-25 UniRef50_Q7WEI1 Heme uptake transmembrane sensor n=2 Tax=Bordete... 117 4e-25 UniRef50_C1DGE4 Anti-sigma factor protein, FecR family n=1 Tax=A... 115 2e-24 UniRef50_C6DBT1 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacter... 115 3e-24 UniRef50_B1J6G1 Anti-FecI sigma factor, FecR n=2 Tax=Gammaproteo... 114 3e-24 UniRef50_D0KIJ1 Anti-FecI sigma factor, FecR n=1 Tax=Pectobacter... 114 3e-24 UniRef50_Q82VI9 Putative transmembrane sensor n=1 Tax=Nitrosomon... 114 4e-24 UniRef50_A1BAQ4 Putative FecR n=1 Tax=Paracoccus denitrificans P... 111 3e-23 UniRef50_B7VA52 Probable transmembrane sensor n=5 Tax=Pseudomona... 111 4e-23 UniRef50_Q2KUB5 Heme uptake transmembrane sensor n=2 Tax=Bordete... 110 6e-23 UniRef50_A6W3B6 Sigma factor regulatory protein, FecR/PupR famil... 109 1e-22 UniRef50_Q2RUF5 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC... 109 1e-22 UniRef50_A5VYP7 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas... 108 2e-22 UniRef50_Q2KZD9 Putative transmembrane sensor protein (Fragment)... 108 3e-22 UniRef50_A7IJ25 Anti-FecI sigma factor, FecR n=3 Tax=Alphaproteo... 108 3e-22 UniRef50_A9VXG0 FecR protein n=6 Tax=Methylobacterium RepID=A9VX... 107 4e-22 UniRef50_B9JNI9 FecR iron sensor protein n=1 Tax=Agrobacterium r... 107 7e-22 UniRef50_Q3SR62 FecR protein n=3 Tax=Bradyrhizobiaceae RepID=Q3S... 107 8e-22 UniRef50_C5BRF0 Transmembrane sensor n=1 Tax=Teredinibacter turn... 106 1e-21 UniRef50_D1T576 Transmembrane sensor, putative n=1 Tax=Burkholde... 106 1e-21 UniRef50_Q7VZ09 Putative signal transduction protein n=2 Tax=Bor... 104 3e-21 UniRef50_Q15XC6 Putative FecR n=1 Tax=Pseudoalteromonas atlantic... 104 4e-21 UniRef50_C1DIF1 Anti-sigma factor protein, FecR family n=1 Tax=A... 104 5e-21 UniRef50_Q4K9E6 Sigma factor regulatory protein, FecR/PupR famil... 103 6e-21 UniRef50_B1ZHY6 Anti-FecI sigma factor, FecR n=2 Tax=Methylobact... 103 8e-21 UniRef50_Q88PI4 Transmembrane sensor, putative n=6 Tax=Pseudomon... 103 1e-20 UniRef50_D1ST92 Anti-FecI sigma factor, FecR n=1 Tax=Acidovorax ... 102 1e-20 UniRef50_B7V267 Probable transmembrane sensor n=7 Tax=Pseudomona... 102 3e-20 UniRef50_B0T8M8 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 102 3e-20 UniRef50_D2LKP6 Anti-FecI sigma factor, FecR n=2 Tax=Rhodomicrob... 101 3e-20 UniRef50_Q3SSZ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb... 101 4e-20 UniRef50_B7UW19 Probable transmembrane sensor n=6 Tax=Pseudomona... 101 4e-20 UniRef50_Q2L2C5 Transmembrane sensor protein n=1 Tax=Bordetella ... 100 5e-20 UniRef50_Q1I5S1 Putative FecR-like transmembrane sensor n=1 Tax=... 100 9e-20 UniRef50_C1DDL2 Anti-sigma factor, FecR family n=1 Tax=Azotobact... 100 1e-19 UniRef50_Q4K5N6 Sigma factor regulatory protein, FecR/PupR famil... 100 1e-19 UniRef50_B2HV65 Fe2+-dicitrate sensor, membrane component n=5 Ta... 99 2e-19 UniRef50_B4W7I5 Sigma factor regulatory protein, FecR/PupR famil... 99 2e-19 UniRef50_Q82TB4 Putative transmembrane sensor n=1 Tax=Nitrosomon... 99 3e-19 UniRef50_B3PLQ9 Sigma factor regulatory protein, FecR/PupR famil... 99 3e-19 UniRef50_C6X7E8 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 98 3e-19 UniRef50_A9C118 Anti-FecI sigma factor, FecR n=1 Tax=Delftia aci... 97 5e-19 UniRef50_Q0AEB9 Putative FecR n=2 Tax=Nitrosomonas RepID=Q0AEB9_... 97 7e-19 UniRef50_Q82WU9 Putative transcriptional regulator, putative n=1... 97 9e-19 UniRef50_Q3SN47 FecR protein n=2 Tax=Nitrobacter RepID=Q3SN47_NITWN 96 2e-18 UniRef50_A6X2N0 Anti-FecI sigma factor, FecR n=1 Tax=Ochrobactru... 96 2e-18 UniRef50_C6XBX5 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 95 4e-18 UniRef50_B0KMD4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 94 5e-18 UniRef50_B0U8Q5 Anti-FecI sigma factor, FecR n=1 Tax=Methylobact... 94 7e-18 UniRef50_B9K518 Two component sensor kinase n=1 Tax=Agrobacteriu... 94 9e-18 UniRef50_Q3SNK9 FecR protein n=2 Tax=Nitrobacter RepID=Q3SNK9_NITWN 93 1e-17 UniRef50_Q82W78 Putative transmembrane sensor n=1 Tax=Nitrosomon... 92 2e-17 UniRef50_Q2RRS2 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC... 92 2e-17 UniRef50_Q1LPC1 Putative FecR n=1 Tax=Cupriavidus metallidurans ... 91 5e-17 UniRef50_Q3SQY3 Probable FecR, iron siderophore sensor protein n... 91 8e-17 UniRef50_Q15VP5 Putative FecR n=1 Tax=Pseudoalteromonas atlantic... 90 8e-17 UniRef50_D0Y1A0 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 90 9e-17 UniRef50_C5SQ91 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 90 9e-17 UniRef50_B8L287 Anti-FecI sigma factor, FecR n=1 Tax=Stenotropho... 90 1e-16 UniRef50_C7JHQ2 Two component sensor histidine kinase FecR/PupR ... 90 1e-16 UniRef50_B0SXJ1 Anti-FecI sigma factor, FecR n=2 Tax=Caulobacter... 90 1e-16 UniRef50_C1DE50 Anti-sigma factor protein, FecR family n=1 Tax=A... 90 1e-16 UniRef50_B7VA09 Probable transmembrane sensor n=6 Tax=Pseudomona... 89 2e-16 UniRef50_A5W6B0 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonas... 89 3e-16 UniRef50_A8EWQ5 Sigma factor regulatory protein, FecR/PupR famil... 89 3e-16 UniRef50_B7S234 Sigma factor regulatory protein, FecR/PupR famil... 88 5e-16 UniRef50_Q3SU82 FecR protein n=5 Tax=Rhizobiales RepID=Q3SU82_NITWN 87 7e-16 UniRef50_Q1N723 Regulatory protein PupR, putative n=1 Tax=Sphing... 87 9e-16 UniRef50_Q7M8T7 PUTATIVE TRANSMEMBRANE SENSOR n=1 Tax=Wolinella ... 87 9e-16 UniRef50_Q4KBX2 Sigma factor regulatory protein, FecR/PupR famil... 87 1e-15 UniRef50_C5SN43 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 86 1e-15 UniRef50_A9BM35 Anti-FecI sigma factor, FecR n=2 Tax=Comamonadac... 86 1e-15 UniRef50_A8ICQ2 Putative iron siderophore sensor protein n=1 Tax... 86 1e-15 UniRef50_Q3HKE5 FecR protein n=3 Tax=Rhodobacter sphaeroides Rep... 86 1e-15 UniRef50_D1NXK1 Sigma factor regulatory protein, FecR/PupR famil... 86 2e-15 UniRef50_Q217A2 Putative FecR n=1 Tax=Rhodopseudomonas palustris... 85 3e-15 UniRef50_A9BUI6 Anti-FecI sigma factor, FecR n=1 Tax=Delftia aci... 85 3e-15 UniRef50_B4SLV2 Anti-FecI sigma factor, FecR n=3 Tax=Stenotropho... 85 4e-15 UniRef50_A3WYF9 Putative FecR n=1 Tax=Nitrobacter sp. Nb-311A Re... 85 4e-15 UniRef50_Q79AD3 HasS protein n=1 Tax=Serratia marcescens RepID=Q... 85 4e-15 UniRef50_D0XYL4 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 84 5e-15 UniRef50_Q0C5P1 Sigma factor regulatory protein, FecR/PupR famil... 84 7e-15 UniRef50_B1J3A1 Anti-FecI sigma factor, FecR n=6 Tax=Pseudomonas... 84 7e-15 UniRef50_Q82VA6 Putative transmembrane sensor n=1 Tax=Nitrosomon... 84 9e-15 UniRef50_A9CLD9 Transmembrane sensor n=1 Tax=Agrobacterium tumef... 84 1e-14 UniRef50_A4Y0Z0 Putative FecR n=1 Tax=Pseudomonas mendocina ymp ... 83 1e-14 UniRef50_Q4KI13 Sigma factor regulatory protein, FecR/PupR famil... 83 1e-14 UniRef50_C5SGH1 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 83 1e-14 UniRef50_C6XPM9 Anti-FecI sigma factor, FecR n=1 Tax=Hirschia ba... 83 1e-14 UniRef50_A9CFJ7 Two component sensor kinase n=1 Tax=Agrobacteriu... 83 1e-14 UniRef50_B7UVL1 Probable transmembrane sensor n=7 Tax=Bacteria R... 83 1e-14 UniRef50_Q82WV2 Possible transmembrane sensor n=1 Tax=Nitrosomon... 83 1e-14 UniRef50_B4WD83 Sigma factor regulatory protein, FecR/PupR famil... 83 2e-14 UniRef50_B4WBG4 Sigma factor regulatory protein, FecR/PupR famil... 82 3e-14 UniRef50_B8H128 FecR family protein n=3 Tax=Caulobacter RepID=B8... 82 3e-14 UniRef50_B7WWP0 Anti-FecI sigma factor, FecR n=2 Tax=Comamonas t... 82 4e-14 UniRef50_D0XU60 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 82 4e-14 UniRef50_Q4KE34 Sigma factor regulatory protein, FecR/PupR famil... 82 4e-14 UniRef50_A3RU50 FecR protein n=4 Tax=Ralstonia solanacearum RepI... 81 4e-14 UniRef50_B4RFZ1 Transcriptional regulator n=2 Tax=Phenylobacteri... 81 4e-14 UniRef50_B4WCX7 Sigma factor regulatory protein, FecR/PupR famil... 81 5e-14 UniRef50_Q1NHX0 Putative transcriptional regulator, putative n=1... 80 7e-14 UniRef50_C6DD79 Anti-FecI sigma factor, FecR n=5 Tax=Pectobacter... 80 7e-14 UniRef50_B1ZVB4 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus te... 80 1e-13 UniRef50_B6YYD9 FecR protein n=1 Tax=Pseudovibrio sp. JE062 RepI... 79 1e-13 UniRef50_Q7WE93 Inner membrane sensor protein n=2 Tax=Bordetella... 79 2e-13 UniRef50_B0KF87 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 79 2e-13 UniRef50_B4WC07 Sigma factor regulatory protein, FecR/PupR famil... 79 2e-13 UniRef50_B4SMM9 Anti-FecI sigma factor, FecR n=3 Tax=Stenotropho... 79 3e-13 UniRef50_Q1NEQ4 Two-component system sensor protein n=1 Tax=Sphi... 79 3e-13 UniRef50_B0SVT6 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 79 3e-13 UniRef50_Q07N91 Putative FecR n=1 Tax=Rhodopseudomonas palustris... 78 3e-13 UniRef50_Q21KS4 FecR protein n=1 Tax=Saccharophagus degradans 2-... 78 3e-13 UniRef50_B1KES8 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonad... 78 4e-13 UniRef50_Q5R0S8 Iron-dicitrate sensor, membrane component n=1 Ta... 78 4e-13 UniRef50_A9CF44 Two component sensor kinase n=1 Tax=Agrobacteriu... 78 5e-13 UniRef50_A8EUR0 Sigma factor regulatory protein, FecR/PupR famil... 78 5e-13 UniRef50_B0T2B1 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 78 5e-13 UniRef50_A8EV42 Sigma factor regulatory protein, FecR/PupR famil... 77 9e-13 UniRef50_D0J1W8 Putative FecR n=1 Tax=Comamonas testosteroni CNB... 77 1e-12 UniRef50_B0SYA7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 76 1e-12 UniRef50_A3UKH4 Transcriptional regulator, putative n=1 Tax=Ocea... 75 2e-12 UniRef50_Q7M9Y4 PUTATIVE TRANSMEMBRANE SENSOR n=1 Tax=Wolinella ... 75 2e-12 UniRef50_A6T0M6 Fe2+-dicitrate sensor, membrane component n=1 Ta... 75 3e-12 UniRef50_C5SKV9 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 75 3e-12 UniRef50_C7JBI1 Two component sensor histidine kinase FecR/PupR ... 75 5e-12 UniRef50_Q3SUW8 FecR protein n=3 Tax=Rhizobiales RepID=Q3SUW8_NITWN 74 6e-12 UniRef50_B4WB56 Sigma factor regulatory protein, FecR/PupR famil... 74 6e-12 UniRef50_B3Y996 Anti-sigma factor n=5 Tax=Ralstonia solanacearum... 74 9e-12 UniRef50_A6GRF6 Putative transmembrane sensor n=1 Tax=Limnobacte... 73 1e-11 UniRef50_B4SL10 Anti-FecI sigma factor, FecR n=3 Tax=Stenotropho... 73 1e-11 UniRef50_Q1G4X2 BhoE n=1 Tax=Bordetella holmesii RepID=Q1G4X2_9BORD 73 1e-11 UniRef50_D0XTN6 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 73 1e-11 UniRef50_D0J6Z7 Putative FecR n=1 Tax=Comamonas testosteroni CNB... 73 2e-11 UniRef50_B0T7R5 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 72 2e-11 UniRef50_Q47F02 FecR protein n=1 Tax=Dechloromonas aromatica RCB... 72 2e-11 UniRef50_Q1NGV4 Transcriptional regulator, putative n=1 Tax=Sphi... 72 3e-11 UniRef50_B6QYF1 FecR protein, putative n=1 Tax=Pseudovibrio sp. ... 71 4e-11 UniRef50_A4C3P5 Putative regulatory protein n=1 Tax=Pseudoaltero... 71 4e-11 UniRef50_B4S0Z9 Putative regulatory protein n=2 Tax=Alteromonas ... 71 6e-11 UniRef50_D0XTD7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 71 6e-11 UniRef50_B8H0G1 FecR family protein n=2 Tax=Caulobacter vibrioid... 71 7e-11 UniRef50_Q2IVD7 Putative FecR n=2 Tax=Rhodopseudomonas palustris... 70 8e-11 UniRef50_A1B6B7 Putative FecR n=1 Tax=Paracoccus denitrificans P... 70 1e-10 UniRef50_B1ZXK1 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus te... 70 1e-10 UniRef50_B8KN81 CytoChrome c oxidase Cbb3-type, subunit I n=1 Ta... 70 1e-10 UniRef50_Q1YSL3 Putative regulatory protein n=1 Tax=gamma proteo... 70 1e-10 UniRef50_Q1YUD9 Sigma factor regulatory protein, FecR/PupR famil... 70 1e-10 UniRef50_B3PGL0 Probable transmembrane sensor n=1 Tax=Cellvibrio... 69 1e-10 UniRef50_B0T3U4 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 69 2e-10 UniRef50_B0T4N7 Anti-FecI sigma factor, FecR n=2 Tax=Caulobacter... 69 3e-10 UniRef50_C7JHQ5 Two component sensor histidine kinase FecR/PupR ... 69 3e-10 UniRef50_Q213I4 Putative FecR n=2 Tax=Rhodopseudomonas palustris... 69 3e-10 >UniRef50_P23485 Protein fecR n=30 Tax=Enterobacteriaceae RepID=FECR_ECOLI Length = 317 Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL Sbjct: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR Sbjct: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL Sbjct: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST Sbjct: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL Sbjct: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 Query: 301 PVKIQSITRYWINISPL 317 PVKIQSITRYWINISPL Sbjct: 301 PVKIQSITRYWINISPL 317 >UniRef50_Q14F31 FecR (Fragment) n=6 Tax=Enterobacteriaceae RepID=Q14F31_ECOLX Length = 158 Score = 319 bits (818), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 158/158 (100%), Positives = 158/158 (100%) Query: 25 GERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMK 84 GERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMK Sbjct: 1 GERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMK 60 Query: 85 GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAH 144 GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAH Sbjct: 61 GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAH 120 Query: 145 QRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 QRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT Sbjct: 121 QRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 158 >UniRef50_Q4KED4 Sigma factor regulatory protein FecR n=2 Tax=Pseudomonas RepID=Q4KED4_PSEF5 Length = 323 Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 126/312 (40%), Positives = 196/312 (62%), Gaps = 2/312 (0%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 L+ RQA+ A+ WYA L S Q++A W++W D ++ AW++++ L Q+ +P Sbjct: 8 LSVGERQAISGAARWYAQLRSGSASEQEQAAWREWLAADPLHRQAWERMQQLGEQMSALP 67 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQL 123 G +A L +RR +M+ L++L AG GW W+S++ + L ADYRT G + +L Sbjct: 68 GGLAGSTLRGAGRSRRELMRNLVVLASAGSLGWLGWRSDSAQQLLADYRTQIGERRQVRL 127 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DG+ L LNT ++ +V+FD+ QR V+L +GE+ ++TA D LQRPFRV TR ++ ALGT Sbjct: 128 ADGTSLLLNTNTSINVQFDSQQRKVQLLWGEMLVSTAADPLQRPFRVFTRDAEVLALGTR 187 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F +R + Q+ V +HAV+V L + A +R V AG+ L FSA F A++P D +W Sbjct: 188 FVLRSDEREEQVAVLEHAVQVSLGAGLAPRR-VEAGQQLAFSAGGFAALRPNDAAVGAWR 246 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + + D+PLGE++A L+RYR GV++CDP +AGL++SG FP+ +TD L + ++ Sbjct: 247 QGSIIAIDRPLGELLADLSRYRRGVVQCDPQIAGLKISGAFPIDDTDRALAALESGFSLQ 306 Query: 304 IQSITRYWINIS 315 I+ TRYW+ + Sbjct: 307 IKRYTRYWVRVC 318 >UniRef50_C3K1F9 Putative iron transport-related protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K1F9_PSEFS Length = 314 Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 125/306 (40%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 R+ +A+ WY + + + WQQW D +Q AW Q+E L+ LG +P D Sbjct: 6 RKTFEAAASWYVQFQSQTPTAAERHAWQQWLNGDPSHQAAWNQMEQLQRSLGALPQDFTR 65 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 RAL T RR V+K +L+L G G GW + Q + ADYRT+ G R +L DG+ Sbjct: 66 RAL-STSQQRRQVLKWMLVLGGTGYLGWNVQQHTPLGNVWADYRTSVGERRRVELADGTR 124 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ 188 + LNT++A DV FD QR +RL GE+ I T K Q PF V TRQG++ ALGT F VRQ Sbjct: 125 IDLNTRTAIDVVFDGRQRLIRLREGEVLIHTGKRGGQTPFYVETRQGRIQALGTTFNVRQ 184 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 + T++ V + V V P+ R+++AGES F G +W L Sbjct: 185 LPDSTRVGVLEDRVSVAPGDQPSHARLLSAGESADFDRQHVGVNHAYRSSQAAWVDGQLI 244 Query: 249 FSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 + LGEVI L RYR GVL+CD A A LR+SGTF L +TDA+L + TLP++++ T Sbjct: 245 VLNARLGEVIEDLARYRPGVLQCDLASARLRVSGTFRLDSTDAVLANLQATLPIQVKYFT 304 Query: 309 RYWINI 314 RYW+++ Sbjct: 305 RYWVSV 310 >UniRef50_C1DFE7 Anti-sigma factor, FecR family n=2 Tax=Pseudomonadaceae RepID=C1DFE7_AZOVD Length = 317 Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 133/315 (42%), Positives = 182/315 (57%), Gaps = 7/315 (2%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 +D +R ALR A+ W+AVL + V + A W+ W Q +NQWAWQ++E L+ QL +PG Sbjct: 3 SDRQRDALRMAARWHAVLCSDEVREEDRAAWRAWRAQAPENQWAWQRMELLQRQLQDLPG 62 Query: 66 DVASRAL-HDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQL 123 ++A + + + RL RR ++KG++L GA GW Q + AD R+A G R L Sbjct: 63 NLAFQTMSEEPRLGRRTLLKGVILAGGAATLGWTARQGLPWQEWLADQRSAIGERRRLTL 122 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTALG 181 EDGS L LNT SA DVRFD +R + L GEI + TA+ +RPF V T G + ALG Sbjct: 123 EDGSRLVLNTDSAVDVRFDGQRRLIELHRGEILVETARSLGGDERPFVVSTHDGLIRALG 182 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTS 241 T F VRQ F+++ V +HAV V ++A + IV AG++L F A + D + Sbjct: 183 TRFIVRQHRTFSEVTVLEHAVAV--SNAAPGETIVQAGQALAFDAGR-NLPRRFDPLAAE 239 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 W L D L +++ L RYR G L DPAVA LRLSG +PL +TD L I LP Sbjct: 240 WANGRLVIDDWRLADLLDELARYRPGFLSADPAVADLRLSGAYPLDDTDRALAAIVHALP 299 Query: 302 VKIQSITRYWINISP 316 V++ S TRYW+ + P Sbjct: 300 VRLSSHTRYWVRLLP 314 >UniRef50_Q1GXU4 Putative FecR n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXU4_METFK Length = 320 Score = 209 bits (533), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 118/320 (36%), Positives = 173/320 (54%), Gaps = 6/320 (1%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M PL D L A+ W + + +A ++W Q + ++ AWQ+ + + Sbjct: 1 MKPLDIDP--SILEQAADWLVQMHSGEGNAVNDAEIERWRSQSEQHEVAWQRAQQFIGIV 58 Query: 61 GGVPGDVASRALH-DTRLTRRHVMKGLLLLLG-AGGGWQLWQSETGEGLRADYRTAKGTV 118 +P ++ AL RR +K L +LL + WQ W+++ G +DY A G Sbjct: 59 HTLPPELGKAALQRPVSPARRRAIKKLAVLLALSPAAWQAWRTQPWLGYTSDYHVATGRQ 118 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQ 176 +L DG+ L LNT ++ DV +D HQR VRL GE+ ITTA D RPFRV TR G Sbjct: 119 QHIKLADGTALVLNTATSIDVIYDQHQRLVRLKRGELHITTATDPSGRNRPFRVQTRDGM 178 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ALGT F++RQ D+ + L V AVE+ S+P +K I+ AG +F A + +P+ Sbjct: 179 ARALGTRFSIRQLDHSSHLAVFDSAVEITPKSSPNRKTIIQAGSQTEFGAMDVQQPRPVS 238 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + +WT +L D+PL V+ L RY GVLRC P + LR+SGTFPL LN++ Sbjct: 239 EAQEAWTHGMLVVRDQPLAAVVDELRRYHVGVLRCHPDIGRLRVSGTFPLTEIGRTLNLL 298 Query: 297 AQTLPVKIQSITRYWINISP 316 +TLP+ + ++ YWIN+SP Sbjct: 299 QRTLPISVARVSPYWINLSP 318 >UniRef50_A6T3T9 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T3T9_JANMA Length = 340 Score = 206 bits (525), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 128/320 (40%), Positives = 179/320 (55%), Gaps = 11/320 (3%) Query: 7 DSR---RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 DSR R R A+ W A L + S + A ++W D +++ AWQ+ + + + G V Sbjct: 17 DSRPIDRAIAREAAQWLASLYDGQ-SEEDIAACKRWRAADPEHERAWQRAQRINQKFGIV 75 Query: 64 PGDVASRAL-HDTRLTRRHVMKGLL-LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 P V AL R+ RR +K LL L++ A G+ ++ + ADYRTAKG Sbjct: 76 PKAVGLPALGRKVRVDRRRAIKTLLVLMMAAPVGYVSYRYAPWVAMTADYRTAKGEHREI 135 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA---LQRPFRVLTRQGQLT 178 QL DG+ + L T ++ D+ FD QR +RL GEI + T D+ RPF V T G + Sbjct: 136 QLADGTRVHLGTATSIDIEFDGAQRLLRLHAGEIEVRTGSDSGHPAYRPFIVKTTHGYIR 195 Query: 179 ALGTEFTVRQQDNFT--QLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ALGT F VR+ + T ++ V +HAVE+ +A + ++NAG+ +F+ S F V+ LD Sbjct: 196 ALGTRFVVRRDEGATTTRVSVLEHAVEIRPQAASGKLIVLNAGQQTRFNESGFEQVEALD 255 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 WT +L S L E A L RYR G+LRCDPAVAGLR++G F L NTD ILN + Sbjct: 256 PHVADWTSGVLFASRMRLDEFAAELNRYRPGLLRCDPAVAGLRITGAFQLDNTDNILNAL 315 Query: 297 AQTLPVKIQSITRYWINISP 316 TLPV++ TRYW+ I P Sbjct: 316 PDTLPVEVLFRTRYWVTIVP 335 >UniRef50_B3PJT3 Transmembrane sensor n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJT3_CELJU Length = 332 Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 116/320 (36%), Positives = 176/320 (55%), Gaps = 17/320 (5%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 D RRQA+ WY +++ + + + + W + AW +++++RN L GVPG+ Sbjct: 14 DIRRQAI----AWYVLMNSGEATAAERSACEHWLALHPQHADAWSRLDSVRNALAGVPGN 69 Query: 67 VASRALHDTRLTRRHVMKG-LLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 +A L RR ++KG L LG G G +W+ + AD++T G + L+D Sbjct: 70 IAIPTLTGGNTNRRGLLKGGAWLALGLGSGALMWREQPWRTYMADFKTRTGEQRQFTLDD 129 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD-----------ALQRPFRVLTRQ 174 GS L LNT + D+RF H R + L +GE+ I TA D RPF + T Q Sbjct: 130 GSQLLLNTDTQIDLRFSNHTRLLHLLHGEVLIQTAADQSGSFDESRSRKASRPFEIQTAQ 189 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G++ ALGT F VR Q ++T + V +HAVE+ L + A R+ AG+ ++FS +P Sbjct: 190 GRIRALGTRFVVRDQQDYTLVTVLEHAVEIRLQNRSAPVRL-EAGQQVRFSRERVEQPQP 248 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 + + +W L+ +D+PLGEVI L RYR G+LR P + +R+SG FP+K+TD L Sbjct: 249 VSANADAWVHGQLAVNDQPLGEVITELARYRPGILRISPEASAIRVSGVFPVKDTDRTLA 308 Query: 295 VIAQTLPVKIQSITRYWINI 314 V+A P++I + T YWI I Sbjct: 309 VLASRFPIRINATTPYWIRI 328 >UniRef50_B0KIL8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas RepID=B0KIL8_PSEPG Length = 307 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 125/307 (40%), Positives = 174/307 (56%), Gaps = 8/307 (2%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 ++ L A WY L VS WQ W D + AWQ++E L+ +LG P +A Sbjct: 2 KRTLAQAVDWYVRLHDSAVSDTTRREWQAWLAADPQHAQAWQRIEQLQQRLGQAPAGLAG 61 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQ-SETGEGLRADYRTAKGTVSRQQLEDGS 127 L R RR +K L +LLG G GW+ +Q S G ADY T G L DGS Sbjct: 62 TTLEQARQQRRAAVKMLAMLLGVGVVGWRGYQVSPWG----ADYSTRVGQRRHFTLADGS 117 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 L L+T S ADV+FD QR + L GEI + TAKD RP V T +G++ ALGT FTVR Sbjct: 118 RLVLDTDSRADVQFDGTQRLIVLHQGEILVETAKDT--RPLSVQTAEGRVLALGTRFTVR 175 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 Q +++ V+ HAVEV A Q AG+++ F+A G + P + ++WT+ +L Sbjct: 176 QGAGISRVTVEAHAVEVQPRLAIGQTLRAEAGQAVSFTADTAGPLLPAVAQGSAWTQGML 235 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 D L +V+A L+RYR+G L C P VAGLRLSGTF L +++ +L + +LPV+++ + Sbjct: 236 VVVDWRLEDVVAELSRYRHGYLGCAPEVAGLRLSGTFLLDDSEGVLANLEDSLPVRLRRL 295 Query: 308 TRYWINI 314 TRYW+ + Sbjct: 296 TRYWVRV 302 >UniRef50_Q7N8I4 Similarities with probable transmembrane sensor n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N8I4_PHOLL Length = 337 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 113/308 (36%), Positives = 171/308 (55%), Gaps = 7/308 (2%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L A+ W +L S W Q ++ AW+ + L +L +P +AS L Sbjct: 29 LAEAAEWLTILHDSHASEADRNACAAWCAQSPEHAQAWEHAQCLLARLHHLPPHIASPLL 88 Query: 73 HDTR-LTRRHVMKGL--LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 ++ + L+RR ++ L +LL+ AG W+S+ + L DY T G + L D S L Sbjct: 89 NNKQPLSRREAIRKLTLMLLIPAGASSLFWRSDQFQLLTGDYHTQTGQIQHWSLPDNSQL 148 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEFTVR 187 TLNTQS+ DV +D QR + L GEI I T KD RPF+V T+QG + ALGT+F+VR Sbjct: 149 TLNTQSSTDVHYDDTQRLISLKLGEIYIETHKDNRHPARPFKVQTKQGVIVALGTKFSVR 208 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 QQ + Q+++ + AV + I++AGE+ F+ S SW + ++ Sbjct: 209 QQASHAQVEIVEGAVRI--TPDNGLPHILHAGEATHFTQFTVAPQHTRSITSLSWLQGMM 266 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 + PL V+ L RYR+G++RCD AVA LR+SG FPL++TD L+++ QT P+ I+ + Sbjct: 267 VADNLPLATVVTELNRYRSGIIRCDDAVAHLRVSGAFPLRDTDLALHMLLQTYPLSIRRL 326 Query: 308 TRYWINIS 315 TRYWI ++ Sbjct: 327 TRYWITLT 334 >UniRef50_A6T3T5 Fe2+-dicitrate sensor, membrane component n=2 Tax=Betaproteobacteria RepID=A6T3T5_JANMA Length = 329 Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 128/327 (39%), Positives = 174/327 (53%), Gaps = 29/327 (8%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 D Q R A W L VS +EA Q W Q D+ AWQ++E++ N+L GV Sbjct: 11 DVSPQIARRAVEWLVALQSGDVS--REA-LQAWLAQHPDHVRAWQRIESVNNKLRGVASP 67 Query: 67 VASRALHDTRLT------RRHVMKGLLLLLGAGGG---------WQLWQSETGEGLRADY 111 + + H T LT RR +K L G W+ W AD Sbjct: 68 LTTALAHAT-LTAPRSNKRRAAIKTLATFFFVGATAYMAEEYLPWRAWS--------ADE 118 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFR 169 RTA G L DG+ L LNT +A +VRF +R V L +GEI ITTAKDAL+ RPF Sbjct: 119 RTALGERRTIVLVDGTELVLNTDTAVNVRFTEQERRVVLLWGEIMITTAKDALELPRPFV 178 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V T QG+L +GT F VRQQ ++LDV + AVE+ KR++ AG+ +QF+ Sbjct: 179 VQTAQGELQPVGTRFVVRQQTEVSRLDVFEGAVEIRPKDGAGLKRVIQAGQRVQFTHDGI 238 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 L + +WT+ ++ S L + +A L+RYR G L CDPA+A +R+SG++PL +T Sbjct: 239 SDPVILKSDDGAWTEGMIVASGMRLQDFLAELSRYRRGRLTCDPAIADMRVSGSYPLTDT 298 Query: 290 DAILNVIAQTLPVKIQSITRYWINISP 316 D IL + TLPV+I +TRYW+ I P Sbjct: 299 DLILTALGSTLPVEIHFMTRYWVTIRP 325 >UniRef50_A6T0J4 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0J4_JANMA Length = 327 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 122/312 (39%), Positives = 171/312 (54%), Gaps = 11/312 (3%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 ++ + A++W L + + A ++W EQ ++Q AW L G VP + Sbjct: 18 KRIVMDAANWLVKLHSQEMDASDHASLKRWCEQSTEHQRAWHAANELARNFGAVPAGLGL 77 Query: 70 RALHDTRLTRRHVMKGLLLLLG-AGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 L R RR MK L ++ A W W R +Y+TA G S L DGS Sbjct: 78 TTLGRQR-NRRAAMKTLAIVCTLAPTSWLAWTHMA----RDNYQTATGERSTYTLADGSS 132 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEFTV 186 L LNT S+ D+ FD QR +RL GE+ + TAKD+ RPF V T QG + ALGT F V Sbjct: 133 LMLNTGSSVDIVFDDKQRLLRLRAGEVLVQTAKDSAPNPRPFIVQTGQGSVRALGTRFIV 192 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE--STSWTK 244 RQ+++ T++ V +HAVEV A A I+ AG F ++ A+ PL + +++WT+ Sbjct: 193 RQREDATEVAVLEHAVEVR-ALGVADPVIIAAGYGGSFGKTDIAALTPLANNVNASAWTQ 251 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 IL + L + +A L RYR G+LRCDPAVA LR+SG F NT+ LNV+ +TLPV + Sbjct: 252 GILIADRQRLEDFLAELGRYRPGILRCDPAVADLRISGVFQTSNTEQALNVLQETLPVTV 311 Query: 305 QSITRYWINISP 316 S TRYW+ + P Sbjct: 312 LSRTRYWVTVLP 323 >UniRef50_B0KIR0 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIR0_PSEPG Length = 315 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 124/307 (40%), Positives = 168/307 (54%), Gaps = 5/307 (1%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 R L +A+ WY L E A ++W D +Q AW+++ L+ L V +A Sbjct: 9 RNTLEAAARWYVELRCE-ADEATRAAHRRWLLSDPRHQQAWERLGRLQGTLQQVAPGIAR 67 Query: 70 RALHDTRLTRRHVMKGL--LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 L+ R RR V+K L LL+ GA GG L + L AD T G QL+DGS Sbjct: 68 PMLNSARAKRREVLKVLSVLLMAGAAGGLALREGGVAS-LMADLSTGVGKRRSLQLDDGS 126 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 L LNT +A +VR+ A R + L GEI + T DAL RPF V TRQG + ALGT FTVR Sbjct: 127 QLQLNTDTAVNVRYTADIRALELLKGEILVQTVPDALSRPFIVHTRQGSVRALGTRFTVR 186 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 +++ V +HAVEV A A R V AG+ L F E GA+ P + +W +++L Sbjct: 187 CDSETSRVCVLEHAVEVRSARGAAVVR-VGAGQQLAFRLEEIGALTPAAAMADAWAREML 245 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 D L +V++ L RYR G L CD AV+ LRLSG F L + D++L + TLPV+I+ Sbjct: 246 VVDDWRLADVVSELQRYRPGYLGCDEAVSDLRLSGAFHLSDIDSVLENLTTTLPVRIRRF 305 Query: 308 TRYWINI 314 +RYW + Sbjct: 306 SRYWTRV 312 >UniRef50_A6SVZ8 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SVZ8_JANMA Length = 334 Score = 193 bits (491), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 123/317 (38%), Positives = 180/317 (56%), Gaps = 14/317 (4%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVEN----LRNQLGGVPGD 66 Q + A W L A WQ+W D +++ AW +E+ LR ++ GV D Sbjct: 12 QVIDKAVEWLVHLWSGSADLDSRAAWQKWRAADPEHERAWLHIEDVNQQLRGRMNGVSAD 71 Query: 67 --VASRALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 +AS A +R +RR +K +++ G W ++ + L ++ RTA G +L Sbjct: 72 TAIASIAQPASR-SRRKALKTFSVVVTVGTAAWLSSETMLWKTLTSEIRTATGERLNFKL 130 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALG 181 DG+ L LNT +A +VR+D+ R V+L GE+ ITTAKD++ RPF T G++ ALG Sbjct: 131 ADGTQLELNTDTAVNVRYDSALRLVQLVRGELLITTAKDSVSPARPFMAETVAGRILALG 190 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST- 240 T+FTVRQ + +Q+ V + AVE++ A+ P Q ++AG++ F+A GA+ P S Sbjct: 191 TKFTVRQDGDISQVAVLEGAVELIPANNPGQVVRLDAGQAGSFNAE--GALTPPQAISAQ 248 Query: 241 -SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +WT+ +L SD L + IA L RYR G L CDPA AGLRLSG FPL + IL + + Sbjct: 249 AAWTEGVLIASDMRLDDFIAELKRYRPGHLSCDPASAGLRLSGVFPLNDMQKILTSLTEV 308 Query: 300 LPVKIQSITRYWINISP 316 LPV++Q+ TRYW I P Sbjct: 309 LPVRVQTFTRYWTRIVP 325 >UniRef50_C6CDZ5 Anti-FecI sigma factor, FecR n=5 Tax=Enterobacteriaceae RepID=C6CDZ5_DICDC Length = 327 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 124/317 (39%), Positives = 175/317 (55%), Gaps = 12/317 (3%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV--- 67 QAL+ A+ WYA L + ARW QW ++ AWQ VE + + + GDV Sbjct: 13 QALQQAADWYAQLLEADHDSELHARWLQWLSASDAHRQAWQYVETISQRFQPLRGDVTPL 72 Query: 68 ASRAL--HDTRLTRRHVMK-GLLLLLGAGGGWQLWQS----ETGEGLRADYRTAKGTVSR 120 AS+ L T LTRR+ ++ G LL G+ W W+ E+ L ADYRT G + Sbjct: 73 ASQTLLQPSTPLTRRYTLRLGALLATGSLLSWLTWRHTPVRESLLALAADYRTGTGEIRH 132 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DG+ L L+T SA DVR+ +R + L GEI + TA D L RP V +R+G + AL Sbjct: 133 VSLSDGTQLWLDTASALDVRYTDVRRQLHLIAGEILLDTAPDTL-RPLFVASREGDMQAL 191 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 G+ F++RQ + TQL V +V V A R ++AG +F A+ G P+ + Sbjct: 192 GSRFSLRQLADSTQLTVYTGSVAVTPRQA-GPLRQIDAGRQWRFDANGAGFETPMGAQDA 250 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W + +L SD PLG+V+A L RYR+G L C P VA LR+ GTFPL +TD L ++++ L Sbjct: 251 DWRQGMLHASDTPLGDVVARLARYRHGYLACAPNVAALRVVGTFPLMDTDRALAMLSRAL 310 Query: 301 PVKIQSITRYWINISPL 317 PV+I +WI + P+ Sbjct: 311 PVRIHRRFDWWITVEPV 327 >UniRef50_B0KPG4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KPG4_PSEPG Length = 313 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 125/313 (39%), Positives = 170/313 (54%), Gaps = 20/313 (6%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 Q R A++W+ ++ + VSP Q A +W +++ AWQ+ ++ QLG +P +A Sbjct: 11 QVARQAANWHMLMLEDAVSPAQRAACNRWRSAAPEHERAWQKALRVQAQLGLLPPQLAMG 70 Query: 71 ALHDTRLTRRHVMKGLLLL-----LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 L+ R R VMK LL L LG G QL Y T G + L D Sbjct: 71 TLNRER---RQVMKQLLALAIVAPLGYVGYRQLAPQNA-------YATDVGQHKQLTLAD 120 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL---QRPFRVLTRQGQLTALGT 182 G+LL LNT +A DV FDAHQR + L GEI I + +D+ RP RV QG L ALGT Sbjct: 121 GTLLDLNTDTAVDVNFDAHQRLISLRRGEILIDSGRDSSSPQHRPLRVACEQGLLEALGT 180 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 F VRQ++ TQL V Q AV V + P Q ++AG+ + F A+ GAV P ++ + W Sbjct: 181 RFLVRQREGATQLTVFQGAVLVTPSHGPRQ--TLDAGQQVTFDAAGQGAVTPAREQDSQW 238 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + L + PL E + L RYR G LRC VA L +SG F L+NTDAIL + TLPV Sbjct: 239 IRGQLLVDEMPLREFLGELGRYRPGWLRCQSDVAQLLISGAFQLENTDAILAALPATLPV 298 Query: 303 KIQSITRYWINIS 315 ++ TRYW+ ++ Sbjct: 299 QVDYRTRYWVTVN 311 >UniRef50_C6XBX8 Anti-FecI sigma factor, FecR n=2 Tax=Betaproteobacteria RepID=C6XBX8_METSD Length = 348 Score = 190 bits (482), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 123/313 (39%), Positives = 174/313 (55%), Gaps = 21/313 (6%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDT 75 A+ W +L S RWQQW + D++ AWQ +E + +L + A + L + Sbjct: 39 AAEWLTLLMSGEASEDDRQRWQQWRMEHADHERAWQHIETIIGRLKIMEPHAAYKTL--S 96 Query: 76 RLTRRHVM------KGLLLLL--GAGGGWQLWQSETG--EGLRADYRTAKGTVSRQQLED 125 TRR + K +++LL GA G L S T + + ADY + GT L+D Sbjct: 97 PYTRREGLHSPDRRKAIVMLLWAGAAGASGLLASRTPAWQQMVADYHSDTGTQRTITLDD 156 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTA---KDALQRPFRVLTRQGQLTALGT 182 G+++TLNT SA +V F QR VRL GE+ ITT DA RPF V T +G++ ALGT Sbjct: 157 GTVITLNTASAINVHFSHQQRLVRLVAGEVLITTGHATSDA--RPFLVETAEGRIRALGT 214 Query: 183 EFTVRQQ-DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTS 241 F VRQQ D +++ V + AVE+ L AP+ + + AG+S F+ + + L D T+ Sbjct: 215 RFAVRQQPDGSSRVAVLESAVEITLEQAPSHR--LPAGQSATFTRNSL-IINSLQDSDTA 271 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 WTK + LG+ L+RYR G++RC+PAVA LR SG FPL++TD IL + LP Sbjct: 272 WTKGQIIADQMRLGDFATELSRYRPGLIRCNPAVADLRFSGVFPLEDTDRILATLPSVLP 331 Query: 302 VKIQSITRYWINI 314 V+I TRYW+ I Sbjct: 332 VRILLRTRYWVTI 344 >UniRef50_B0KJM3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KJM3_PSEPG Length = 327 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 113/312 (36%), Positives = 169/312 (54%), Gaps = 6/312 (1%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + L A+ W LS V+ Q A W W AWQ+ E L +L G+P ++ Sbjct: 13 EVLEEAAEWLMTLSAGDVTEAQRADWLAWRSSSPARAQAWQRAERLMGKLEGLPPALSMS 72 Query: 71 AL-HDTRLTRRHVMKGLLLLLGA-GGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 AL RR ++ + LLL GW W+ G ADYR++ G + L DG+ Sbjct: 73 ALDRPADPGRRAMISRVALLLAVLPAGWASWRLTDQHGWAADYRSSVGECRQLTLADGTQ 132 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALGTEFTV 186 + LNT SA D+RFD ++R ++L GEI + TA D + RP RV TR+G++ ALGT F+V Sbjct: 133 VYLNTDSAIDIRFDGNERFIQLRRGEILVQTAPDIVVPARPLRVGTREGRMQALGTRFSV 192 Query: 187 RQQDNFTQLDVQQHAVEV-LLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 R++D T L V + AV + +V AGE + F+A G P+D +T+WT+ Sbjct: 193 RERDGRTWLAVVEGAVRIEPAGGGANAGAVVQAGERVDFNAHRVGRPMPVDLTATAWTQG 252 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 +L L E +A L RY+ G +RCDP +AGLR+SG FP+ +T L+++ T +++ Sbjct: 253 MLLADSMRLDEFVAELARYQRGFIRCDPRIAGLRISGAFPVSDTRRSLSMLESTYALQVS 312 Query: 306 S-ITRYWINISP 316 + + YW +SP Sbjct: 313 AHMNGYWTLLSP 324 >UniRef50_C6XE50 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE50_METSD Length = 333 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 111/311 (35%), Positives = 164/311 (52%), Gaps = 7/311 (2%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L+ A+ W+A+L QQ A WQ W EQD ++ AWQQVE++ + V D A + L Sbjct: 18 LQQAAEWFAMLHAGEFDAQQRAAWQAWLEQDNTHRMAWQQVESVLRKFQHVEDDAARQTL 77 Query: 73 HDTRLTRRHVMKGLL-LLLGAGGGWQLWQSETGEG----LRADYRTAKGTVSRQQLEDGS 127 RR +K ++ L L + GGW + + + L A + T G R QL DGS Sbjct: 78 RTISQGRRRAVKSIMALCLLSAGGWGIARQPAVQQWSGILMAQHTTRIGERRRMQLADGS 137 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEFT 185 +L +NT SA ++ + + + + L GE+ + TA D +Q RPF + TR G+L ALGT F Sbjct: 138 ILWMNTASAINMHYSSKEPRIELIAGEVWVQTATDPMQPGRPFLISTRHGELQALGTRFN 197 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 V + + V + AV + L A IV AGE F D SWT Sbjct: 198 VLDDGQCSHVAVFEGAVAIRLPQAGQPGLIVQAGEQSSFDGISIRPAHEADPAMESWTHG 257 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 +L + PL E ++ L RYR G L DPA++ LR+ G FPL++TD L+++ QTLPV++ Sbjct: 258 MLVADNLPLPEFVSRLERYRRGHLGYDPALSHLRIVGAFPLQDTDRALHLLEQTLPVRVH 317 Query: 306 SITRYWINISP 316 + +W+ + P Sbjct: 318 RLLPWWVTLEP 328 >UniRef50_A9BWH6 Anti-FecI sigma factor, FecR n=2 Tax=cellular organisms RepID=A9BWH6_DELAS Length = 323 Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 117/313 (37%), Positives = 167/313 (53%), Gaps = 3/313 (0%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 L + R+AL A+ W+ L G + + WQ+W++ D +Q AW +V+++ QL +P Sbjct: 6 LEGNDRRALHEAAAWHVKLRGASATEGLQQDWQKWHDADPAHQRAWLRVQSVTAQLSHLP 65 Query: 65 GDVASRAL-HDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQ 122 +A +AL TRR V++GL L LG+G W W+ E +A RTA G + Sbjct: 66 APLARQALGRRASPTRRSVVRGLALGLGSGATAWMAWKGAPLESWQAGQRTATGERRDLK 125 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 L DGSL+ L+T +A D FD QR +RL G I + T DAL RPF V T QG + ALGT Sbjct: 126 LPDGSLVALDTATALDTVFDDRQRVLRLHRGRILVATEPDALGRPFSVQTPQGHVLALGT 185 Query: 183 EFTVR-QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTS 241 FTV D + V + AV + A + AG+ FS+S D + S Sbjct: 186 RFTVHLADDGLCHVTVLEKAVRLQPLDGDAPSAQLQAGQQAAFSSSATQPPTSADPFAAS 245 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 W + L D PLG++I L RYR G L C VAG+ +SG FP+ +TD L + P Sbjct: 246 WHEGGLVALDMPLGQLIDALARYRPGYLGCSAEVAGMLVSGAFPVDDTDRALAALVSRFP 305 Query: 302 VKIQSITRYWINI 314 ++++S TRYW+ + Sbjct: 306 LQLRSRTRYWVEV 318 >UniRef50_A6V0K5 Probable transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=A6V0K5_PSEA7 Length = 317 Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 109/308 (35%), Positives = 171/308 (55%), Gaps = 6/308 (1%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 Q A W L G + WQ+W + +++ AW+ +E + +L G+ +A Sbjct: 12 QVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAGIGTPLALA 71 Query: 71 ALHDTRLT-RRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 ++ R RR +K LL++L AGGG W L ++ + + ADY T+ G R L DGS Sbjct: 72 VVNAPRSAQRRRALKTLLVMLAAGGGAWGLRENGSLQRWSADYATSVGERRRLALADGSR 131 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ 188 + LN+ +A DVRFDA +R + L GEI ++T D RP V + +G+L +GT F VRQ Sbjct: 132 VELNSDTAVDVRFDAGERRLLLLRGEIQLSTGHDP--RPLHVYSAEGRLRPVGTRFDVRQ 189 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 T++ V + AV+V + Q ++ +G L F GA +PL S +WT +L Sbjct: 190 FAGRTRVAVHEGAVQV--ENRGGQGLLLPSGRQLDFDRERLGAPQPLPVGSGAWTDGMLV 247 Query: 249 FSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 + L E +A ++RYR G L CDP + GLR+SG++PL +++ IL + LPV+++ +T Sbjct: 248 AAGMRLDEFLAEVSRYRPGRLGCDPRIGGLRISGSYPLDDSERILATLPTVLPVEVRRVT 307 Query: 309 RYWINISP 316 RYW+ + P Sbjct: 308 RYWVGVHP 315 >UniRef50_B0KMC8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas RepID=B0KMC8_PSEPG Length = 318 Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 120/308 (38%), Positives = 173/308 (56%), Gaps = 14/308 (4%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH-- 73 ASHW + + Q+ R+ +W D ++ AWQ++E+L++ L GV D A L Sbjct: 17 ASHWLMLQWSGELDKAQQRRFAEWRNADPEHARAWQRLEHLQHTLSGVSADTALAVLREQ 76 Query: 74 -DTRLTRRHVMKGLLLLLGAGGGWQLWQSETG--EGLRADYRTAKGTVSRQQLEDGSLLT 130 D R RR +K L LL AGG + QS+ E + AD R+ G ++ L DGS L Sbjct: 77 PDAR--RRQTLKLLSALLLAGGSGYIVQSQLPWREAM-ADLRSGTGERLQRTLADGSRLG 133 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD 190 LN+ SA D++F A +R +RL GE+ + + D QRP V T G + ALGT F+V Q D Sbjct: 134 LNSGSAVDIQFSASERRIRLLAGELLLDSGHDPAQRPLIVDTIAGDVLALGTRFSVYQHD 193 Query: 191 NFTQLDVQQHAVEVLLASAPAQKRIV--NAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 + Q+D+ + +E+ P Q R + AG+ FS ++ G + P + + +W L Sbjct: 194 DKCQVDLFEGELEL----RPRQARAIRLQAGQGCWFSTTQIGDIAPANLNAIAWHDGRLI 249 Query: 249 FSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 PLG+ A L R+R G+LRCDPAVA L L+G FPL +TD +L + Q+LPVK+ +T Sbjct: 250 AERMPLGQFTAELARHRAGMLRCDPAVAALPLTGVFPLADTDRVLTALEQSLPVKVHRLT 309 Query: 309 RYWINISP 316 RYW ISP Sbjct: 310 RYWTTISP 317 >UniRef50_A9BW97 Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BW97_DELAS Length = 327 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 111/317 (35%), Positives = 176/317 (55%), Gaps = 6/317 (1%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 +P+ + RQA++ W+ L+ + +Q Q+W +++ AWQ++E++ +Q+ Sbjct: 9 SPISAEVARQAVQ----WWLQLNSGKAQARQHDGLQRWRAASPEHEAAWQRIESMGSQMA 64 Query: 62 GVP-GDVASRALHDTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVS 119 G+P + RR ++ L +LL +G G + +S+ G AD A G Sbjct: 65 GIPMPLARAALAAPGSAGRRRAVQALAVLLVSGAGSAAVVRSQAWRGWTADQVAAVGEQR 124 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L DG + LNT SA ++R+ A +R + L GEI + TA D+L RPF V T G + A Sbjct: 125 TLPLPDGGSVVLNTGSALNLRYGAAERVLELVRGEILVQTAPDSLHRPFIVQTAMGAVQA 184 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT FTVRQ+++ ++ V Q AV++ A AP + + AGE F+A + LD + Sbjct: 185 LGTRFTVRQRESAVEVGVLQGAVQLRPAHAPHAPQRIAAGEQGTFTAQQAVHSGALDTAA 244 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 ++W + +L S L + + L RYR G L CDPAVAGL +SG +PL +TD +L + + Sbjct: 245 SAWAEGMLVASRMRLEDFLVELGRYRRGRLGCDPAVAGLHVSGAYPLADTDRVLAALTSS 304 Query: 300 LPVKIQSITRYWINISP 316 LPV+I S +RYW+ + P Sbjct: 305 LPVEIHSFSRYWVMVRP 321 >UniRef50_Q82VT5 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82VT5_NITEU Length = 347 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/313 (33%), Positives = 164/313 (52%), Gaps = 8/313 (2%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 +Q A+ W +L + A+WQQW + D++ AWQ +E Q+ + +A Sbjct: 29 KQVTLQAAKWLVMLQAPNTTQATRAKWQQWRDVHPDHERAWQHIEASATQMRAMHSPLAH 88 Query: 70 RALHDTRLTRRHVMKGLLLLLGA-----GGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 L +RH + + LLG W L + AD+RTA L Sbjct: 89 GTLIRDDTEKRHARRRAIKLLGVIAFTGTSTWLLRDNPVWREWHADHRTATSERRTIVLA 148 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQGQLTALG 181 DG+ + LNT S DV FD R V L GEI +TTA D+ +PF V T QG+L ALG Sbjct: 149 DGTRIMLNTASIIDVHFDNAIRLVTLIRGEILVTTAPDSASGTGQPFIVETDQGRLRALG 208 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTS 241 T F VRQ++N + + + + VE+ A A Q R++ AGE + F+ + + +D + S Sbjct: 209 TRFAVRQRENDSHVSLFEGMVEIRPADASDQARVLQAGEQISFTRNAIETPQTIDTHAAS 268 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 W +L + PL + I L RYR G L CDP ++ L++SG +P+++T+ +L+++ P Sbjct: 269 WVTGMLVVQEMPLTDFIDELARYRPGYLSCDPELSHLKVSGIYPIEDTERVLDMLLHVHP 328 Query: 302 VKIQSITRYWINI 314 ++I S+TRYW+ I Sbjct: 329 IEIYSLTRYWVAI 341 >UniRef50_A6SXC7 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXC7_JANMA Length = 330 Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 114/312 (36%), Positives = 166/312 (53%), Gaps = 11/312 (3%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L A+ W+AVL VS ++ +W W + ++++ AWQ+VE + N L +P A Sbjct: 16 LEQAAEWFAVLRSGAVSDEERQQWHAWLDLREEHRLAWQRVEAISNGLA-LPKAAPEAAN 74 Query: 73 HDTR---LTRRHVMKGLLLLLGAG-GGWQLWQSETGE----GLRADYRTAKGTVSRQQLE 124 L RR +K L L G GW + ++ + L ADYR+A G + L Sbjct: 75 AALSAAVLQRRRSLKMLSLFAVTGLAGWGVSRNSAVQTVLADLNADYRSAVGEIRNLTLA 134 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTALGT 182 DGS + LNT S+ D +DA R ++L GE+ I T D + RPF V + +G L ALGT Sbjct: 135 DGSEIWLNTNSSLDQDYDAQIRRIKLRKGEVLIATHPDTQSPARPFIVYSAEGSLRALGT 194 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 F VRQ D T+L V + VEV AP +RI+ +G+ + F+ SE AV D +W Sbjct: 195 RFNVRQLDGKTRLSVLEGRVEVAPLDAPGARRIIESGQQVDFNRSEVLAVAAADPTQQAW 254 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 ++ +L + PL I L RYR+G L CDPAVA LR+ G FPL D L ++ +LPV Sbjct: 255 SQGLLVADNMPLASFIEELARYRSGYLACDPAVADLRVVGGFPLNQPDQALAMLEASLPV 314 Query: 303 KIQSITRYWINI 314 ++ +W+ + Sbjct: 315 RVHQTLPWWVTV 326 >UniRef50_A9C159 Anti-FecI sigma factor, FecR n=2 Tax=cellular organisms RepID=A9C159_DELAS Length = 353 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 124/317 (39%), Positives = 171/317 (53%), Gaps = 20/317 (6%) Query: 19 WYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLT 78 WYA L + A WQ+W+E ++Q AW+ + L++ L VPG +A+ L +R + Sbjct: 39 WYARLCSGDATDADRAAWQRWHEAHPEHQRAWRHFDALQSMLQRVPGHLAASTLQASRRS 98 Query: 79 RRHVMKGLLLLLGAGGGWQL-WQSETGEG-LR---ADYRTAKGTVSRQQLEDGSLLTLNT 133 RR V++G+ L+G+G L WQ G+G +R ADYRT G L DGS LTLNT Sbjct: 99 RRRVLRGIGALVGSGAVAGLSWQLAGGQGGVRSWLADYRTGTGERRTVTLADGSELTLNT 158 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTA----------KDALQRPFRVLTRQGQLTALGTE 183 +++ DV D +R + L GEI + TA KD RPF V T QG++ ALGT Sbjct: 159 RTSVDVSMDPVRRLLVLREGEILVQTAHSLSGPGAGAKDG--RPFMVHTPQGRILALGTR 216 Query: 184 FTVRQQDNF---TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 FTVR Q T + V Q AVE+ P++ + AG+ FS + + D Sbjct: 217 FTVRSQGGAGGDTVVSVLQDAVEIQPLQDPSRSLRLQAGQQANFSRNGMLPAQAADPAQV 276 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 SW L L +V+ L RYR G L CDPAVAGLR+SG FPL +TD L VI + Sbjct: 277 SWVGGSLIVDGWRLDDVVRELARYRPGRLACDPAVAGLRVSGVFPLADTDKALAVITRAF 336 Query: 301 PVKIQSITRYWINISPL 317 PV+ ++RYW+ + P+ Sbjct: 337 PVRAAGLSRYWLTLVPV 353 >UniRef50_B3PJT6 Transmembrane sensor n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJT6_CELJU Length = 329 Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 116/318 (36%), Positives = 172/318 (54%), Gaps = 13/318 (4%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 D + L A W L VSPQ ++ W + Q +Q AW +V+ + QLG VP Sbjct: 14 DLSQDILHRAMEWQVTLWSGEVSPQDMRAFECWLQVSQQHQLAWHKVQQVNQQLGQVPDQ 73 Query: 67 VASRALHDTRLT---RRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQ 122 +ASR L T + RR ++ GL ++ G G+ + QS + ADYRT +G Sbjct: 74 LASRVLRQTAVVDHRRRQLLVGLGIIGSLGALGFGVSQSPQWQMASADYRTGRGQRRELI 133 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD---ALQRPFRVLTRQGQLTA 179 L DG+ L LNT SA DV F A R + L+ GE+ I T D + RP V T G + Sbjct: 134 LPDGTQLMLNTASAMDVVFSADSRRLILYRGEVQIVTGADTGAGIARPLWVETAAGVVRP 193 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIV--NAGESLQFSASEFGAVKPLDD 237 +GT+FT+RQ ++DV + AVE+L P Q + + AG++ QFS + +++ Sbjct: 194 IGTQFTLRQCGKDVKVDVAEGAVELL----PKQGQGIRLEAGQAAQFSRQQVSSIQTAVA 249 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 ++WT+ +L + LG+ IA L+RY G+LRCDPA A L +SG + LK+T +IL + Sbjct: 250 TDSAWTRGLLIAEQQRLGDFIANLSRYHTGILRCDPAAADLIVSGVYLLKDTHSILRTLE 309 Query: 298 QTLPVKIQSITRYWINIS 315 Q LPV++ + YW +S Sbjct: 310 QVLPVRVDTRLGYWTTLS 327 >UniRef50_B0KG70 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonadaceae RepID=B0KG70_PSEPG Length = 311 Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 111/307 (36%), Positives = 165/307 (53%), Gaps = 1/307 (0%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + L +A+ WY L+ S + W+QW + + AW +VE L+ Q +P A Sbjct: 4 KTLEAAATWYVQLNDGANSEARTQAWRQWLQASPQHAAAWARVEKLQQQWAMLPPQAALS 63 Query: 71 ALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 +L + RR V+K L LLL G GGW + L A RT S QL DGS L Sbjct: 64 SLGAAQAQRREVLKVLSLLLAMGAGGWLAAEQVPYRSLLAQQRTGSRERSTLQLVDGSQL 123 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 LN +A DVR+DA R ++L+ GEI + D QRPF V T G + A TEF++R+ Sbjct: 124 ELNVGTALDVRYDAKVRAIQLYQGEILVRPVSDLQQRPFIVHTDDGSVLARSTEFSIRKL 183 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSF 249 T++ V Q +VEV + + AG+ + F +F + L +ST+W + +LS Sbjct: 184 ARQTRVGVLQGSVEVRPQRHLDRLLQLQAGQQVSFDQDDFATAQALPADSTAWLQGMLSV 243 Query: 250 SDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 +D LG+ I L RYR GVLRC A+ + +SG F + +TD L + +TLPV++ ++R Sbjct: 244 NDWRLGDFIEELGRYRPGVLRCASAIRAMSISGAFRIDDTDIALANLPKTLPVRVHYLSR 303 Query: 310 YWINISP 316 YW+++ P Sbjct: 304 YWVSVEP 310 >UniRef50_A9C156 Anti-FecI sigma factor, FecR n=3 Tax=Comamonadaceae RepID=A9C156_DELAS Length = 327 Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 114/307 (37%), Positives = 164/307 (53%), Gaps = 6/307 (1%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L A+ W A S ++A +W Q ++ WQ E L+ + VPG V L Sbjct: 19 LDEAARWLARRHASDFSAAEQAELARWRSQSSRHEQIWQCAEQLKGRFNTVPGAVGMATL 78 Query: 73 HDTR--LTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 + R RR +++ +L L GW W+ + ADYRTAKG L DGS + Sbjct: 79 NRARPSAARRQLLRSAVLALATPALGWLAWRHLPWQDWTADYRTAKGERRAVTLADGSRV 138 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQLTALGTEFTVR 187 LN SA VR D R +R GEI + TA +PF V T GQ+ ALGT F VR Sbjct: 139 QLNMASAISVRMDGTARRIRQHAGEILVETAHAPPYASQPFMVQTDDGQMQALGTRFIVR 198 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 + ++ T L V + AV V A A A+ +V+AGE L F A +P+ ++WT +L Sbjct: 199 KLEHGTALAVLEGAVRVTPA-ASAKAVVVHAGEQLHFDGHGASATRPVAARDSAWTLGVL 257 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 + L + +A L+RYR G+++CD VA LR+SGT+ L++TD IL ++AQTLPV++ Sbjct: 258 YAENLRLQDFLAELSRYREGLVQCDDDVADLRVSGTYQLQDTDRILALLAQTLPVRVHER 317 Query: 308 TRYWINI 314 +RYW+ + Sbjct: 318 SRYWVTV 324 >UniRef50_Q02NL2 Possible Fe2+-dicitrate sensor n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02NL2_PSEAB Length = 316 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 113/315 (35%), Positives = 170/315 (53%), Gaps = 3/315 (0%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M L + + L +A+ WY E + + W++W E D ++ AW+++E L+ Q Sbjct: 1 MQGLTMELEIEVLEAAATWYVRFGAEPPNDGERQAWREWLEADPRHRRAWERIERLQGQW 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGA-GGGWQLWQSETGEGLRADYRTAKGTVS 119 +P + + L R RR ++K L LL A G GW L A RT G Sbjct: 61 AALPAETSLHTLAGVRARRRALLKTLALLACAAGSGWLASGGLPYRALLAGERTGVGERR 120 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 + +L DG+ + L++ +A D+ +D R LW GEI + +A+ A RPF V T QG + A Sbjct: 121 QLRLADGTRVDLSSATALDLAYDESLRQAYLWRGEILVESAQSA--RPFLVHTAQGSVRA 178 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F+VR + T++ V HAVE+ P + + AG+ F + PL + Sbjct: 179 LGTRFSVRCEGPRTRVCVLSHAVELRPLQTPTRPMRLPAGQQALFDERRGYSSTPLREGE 238 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 SWT+ +L+ D PLGE IA L+RYR GVLRC VA LRLSG + L DA+L + ++ Sbjct: 239 GSWTQGVLTVVDWPLGEFIAELSRYRTGVLRCAAEVAELRLSGAYRLDRIDAVLQNLGKS 298 Query: 300 LPVKIQSITRYWINI 314 LPV+++ +TRYW+ + Sbjct: 299 LPVRVRYLTRYWVTV 313 >UniRef50_A6T180 Fe2+-dicitrate sensor, membrane component n=3 Tax=Betaproteobacteria RepID=A6T180_JANMA Length = 341 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 107/313 (34%), Positives = 176/313 (56%), Gaps = 13/313 (4%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 + A+ W L + V+ +WQ+W + D+ AWQ++E +L + +A AL Sbjct: 27 KRAAEWLVELQADTVTDDTRKQWQRWRDAHPDHLRAWQKIEAFGEKLQTLSSPLAHAALT 86 Query: 74 DT-RLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTL 131 RR +K L ++L AGG W + + AD RT G + L DG+LL L Sbjct: 87 TPGSAGRRQAIKTLAIMLFAGGTTWLVEEQLPWRQWSADRRTGVGERATITLADGTLLEL 146 Query: 132 NTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ------RPFRVLTRQGQLTALGTEFT 185 N +++ D+ + QR VRL G+I ITTA D Q RPF V TRQG + ALGT+F+ Sbjct: 147 NAETSVDIHYSDTQRIVRLLSGDIMITTAHDPRQASGGKARPFLVETRQGSIRALGTQFS 206 Query: 186 VRQQDN----FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTS 241 V+Q++ +++ V + AVE+ + + RI+ AG+ F+A F A++ +D+ T+ Sbjct: 207 VQQRNEQRGGASKVSVFEGAVEIR-PNLKGEARILQAGQQTSFTADGFSAIEAVDEAVTA 265 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 W + ++ D PL + + L YR G + CD +A L ++GT+PLK+TD +L+++ TLP Sbjct: 266 WRQGMIVAQDLPLRDFLKELGNYRPGHIDCDDKIAQLPVTGTYPLKDTDKVLDMLQTTLP 325 Query: 302 VKIQSITRYWINI 314 ++++ +TRYW+ + Sbjct: 326 LQVRFVTRYWVTL 338 >UniRef50_A6SXA7 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXA7_JANMA Length = 333 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 115/320 (35%), Positives = 162/320 (50%), Gaps = 22/320 (6%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG------- 65 L+ A+ W+A+L + +S WQ+W + +++ AW +VE + Q Sbjct: 15 LQQAAKWFALLRSDSISDSDRISWQKWLSANAEHRRAWARVEAVSQQFETFTPEPEQSAA 74 Query: 66 ----DVASRALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGE----GLRADYRTAKG 116 D ASRA R RR +K L LL G W + Q E + +DY TA G Sbjct: 75 VNALDAASRA----RKQRRRALKMLTLLCTTGAVSWSVGQLEPVQRSWLAFSSDYSTAVG 130 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQ 174 L DGS + LNT SA + R+ A R + L GEI I TAKD RPF V T Q Sbjct: 131 ETRDVMLADGSQVWLNTASALNARYQADLRRLVLLGGEILIETAKDPAVPTRPFVVDTAQ 190 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G+L ALGT FTVRQ D TQL V + AVE+ +A +I++AG+ + FSA Sbjct: 191 GRLRALGTRFTVRQLDGITQLSVYKGAVEITPVAASGSAQIIDAGQQVLFSADGIEIPSA 250 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 +D + +W K +L D L E + L+RY G L C P VAGLR+ G +PL + Sbjct: 251 VDPANEAWAKGVLFADDLTLAEFVVELSRYHKGYLACAPEVAGLRVVGAYPLHDMQQTFA 310 Query: 295 VIAQTLPVKIQSITRYWINI 314 ++ LPV +++ +W++I Sbjct: 311 MLETALPVTVKATFPWWVSI 330 >UniRef50_B4WXE6 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alcanivorax sp. DG881 RepID=B4WXE6_9GAMM Length = 326 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 114/319 (35%), Positives = 164/319 (51%), Gaps = 16/319 (5%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 Q L A+ W+A+L + + RWQQW Q D+ WQ VE++ Q + + Sbjct: 9 HQILSDAADWFALLRSGQACESDKLRWQQWLRQHPDHLRGWQMVEHIEQQFSTASANHPA 68 Query: 70 -------RALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSET----GEGLRADYRTAKGT 117 +A H+ R+ RR V+ GL L +G GG GW W+ G A YRT G Sbjct: 69 HTEATLKQARHN-RIQRRSVITGLALAIGTGGLGWMSWRHSPLPTLVAGWNAQYRTGTGE 127 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 + +L DGS L LNT SA + D QR +++ GE+ I T K A RP V T QGQL Sbjct: 128 IRALELADGSRLWLNTNSAINTVLDGPQRHIQVIQGEVLIETGK-ADPRPLVVFTPQGQL 186 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 LGT FTV ++ + T L V AVE+ + QK +++ + +FSA+ + P D Sbjct: 187 QPLGTRFTVCRETDTTFLAVYDGAVEI--TNQARQKSVLHPQQQTRFSANALQPIHPADP 244 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +W K IL D LG+++ L RY++G + PAVA LR+ G FPL + L+++A Sbjct: 245 ARETWHKGILVADDIRLGDLVDELGRYQHGYINLSPAVADLRVFGGFPLTDPQQALDMLA 304 Query: 298 QTLPVKIQSITRYWINISP 316 LP+++ W NI P Sbjct: 305 SALPIRVTRPLPGWTNIHP 323 >UniRef50_A5VYE0 Anti-FecI sigma factor, FecR n=4 Tax=Pseudomonas putida RepID=A5VYE0_PSEP1 Length = 318 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 113/304 (37%), Positives = 170/304 (55%), Gaps = 9/304 (2%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL--- 72 A W L + SP+ E ++Q W N+ AWQ+V +L ++L G+P D++ R L Sbjct: 16 AIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAWQRVSHLGDELAGLPKDLSRRTLDAS 75 Query: 73 HDTRLTRRHVMKGLLLLLGAGG--GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 + +RR +K LL LL GG GW + L AD TA G + Q DGS + Sbjct: 76 QHPKASRRDHLK-LLGLLAVGGSLGWAAREPLGLPQLLADTSTATGERRQWQGSDGSRIQ 134 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD 190 LNT SA D+ + A QR ++L +GE+++ + + RPF V T G LT + +R+ Sbjct: 135 LNTASAIDLHYSAEQRQLKLIHGEVSLDSNPND-NRPFHVATPVGPLTTFDGQLLLRENS 193 Query: 191 NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFS 250 L V++ V + ASA A R V GE+LQ SA+ + L ++ WT+ +LS Sbjct: 194 QGLLLSVRRGEVTLFPASASA--RQVLPGETLQVSANGSIQARTLHNDPWGWTEGVLSVQ 251 Query: 251 DKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 PL E ++ L RYR G+LRC P VAGL++SGT+ L +T IL ++ ++LPV+++ TRY Sbjct: 252 QMPLAEFVSELGRYRPGLLRCAPEVAGLKVSGTYQLDDTGQILQLLTRSLPVRVEYRTRY 311 Query: 311 WINI 314 W++I Sbjct: 312 WVSI 315 >UniRef50_A6SX53 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SX53_JANMA Length = 330 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 119/320 (37%), Positives = 164/320 (51%), Gaps = 28/320 (8%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 ++ A W L SP E + W D ++ AWQ++ L +AS L Sbjct: 17 VKQAIVWLVTLQSGGASPTDERACEAWRAADSRHEQAWQRLHGLGQDFRASSNVLASPLL 76 Query: 73 HDT-----RLTRRHVMKGLLLLLGAGGGWQL------WQSETGEGLRADYRTAKGTVSRQ 121 R RR V+K L L GG + WQS E ++TA G R Sbjct: 77 RSVLRNSERNNRRIVLKSLFGLALIGGTATVVRKQPAWQSAMAE-----HQTATGEQRRI 131 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 L DG+ + LNT +A DV FD R V L GEI I TA+D RPF + T G + +G Sbjct: 132 VLADGTRILLNTATAIDVHFDDQLRLVILHRGEILIETAQDEAGRPFELATSNGTIRPIG 191 Query: 182 TEFTVRQQD--NFTQLDVQQHAVEVLLASAPAQKRIV--NAGESLQFSASEFGAVKP--L 235 T FTVR D + T + V + AV V P Q V NAGE F+ E A+ P L Sbjct: 192 TRFTVRHSDRPSSTAVAVLEGAVRV----TPGQGNSVRINAGEQTHFT--ELAALAPFAL 245 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 DD + +WT +L L + + L RYR GVLRCDPAVA L +SG+FPL++ DA+L + Sbjct: 246 DDSAAAWTDGVLVVERMRLADFVTELDRYRPGVLRCDPAVADLLVSGSFPLRDPDAVLAL 305 Query: 296 IAQTLPVKIQSITRYWINIS 315 +A+TLP++++++TRYW ++ Sbjct: 306 LAETLPLQVRTLTRYWATVT 325 >UniRef50_C6DJA8 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacterium RepID=C6DJA8_PECCP Length = 329 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 115/324 (35%), Positives = 172/324 (53%), Gaps = 21/324 (6%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P+ DS R+A+ W L + V+ Q WQ+W E DN+ AWQ +E++ L Sbjct: 14 PIQPDSAREAV----AWLTQLMSDSVTEQDRREWQRWREASSDNEQAWQHIESVCANLSQ 69 Query: 63 VPGDVASRALHDTR-LTRRHVMKGLLLLLGAGGGW------QLWQSETGEGLRADYRTAK 115 + A ++L + RR V+K L +L GG LWQS L ADY+T Sbjct: 70 LNARAAHQSLSTLNGMQRRSVLKALAILCLTGGAGVAGSRTDLWQS-----LTADYQTQV 124 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTA---KDALQ-RPFRVL 171 G L+DG+ L LNTQ+A +V + R + L GE+ I T K AL RPF V Sbjct: 125 GEQQHAVLDDGTTLLLNTQTALNVAYGDDLRHLMLIRGEVMIETGQAEKAALYPRPFIVT 184 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T QG++ ALGT F++R QD T++ V AV++ ++V +G++ F+ G Sbjct: 185 TAQGKVQALGTRFSLRVQDEHTRVTVYDGAVKLHPQQNGQDVQVVKSGQTATFTTQRCGQ 244 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 ++ E +W K L ++ L + + L+RYR+GV+RC P V LR SG FPL +TD Sbjct: 245 IETAKAEP-AWVKGQLLADNQRLVDFVDELSRYRSGVIRCQPEVESLRFSGVFPLSDTDN 303 Query: 292 ILNVIAQTLPVKIQSITRYWINIS 315 IL + + LPV+++ +RYW+ I+ Sbjct: 304 ILAALVEALPVQVRYFSRYWVQIA 327 >UniRef50_B7VAW3 Probable transmembrane sensor n=7 Tax=Pseudomonas aeruginosa RepID=B7VAW3_PSEA8 Length = 316 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 116/306 (37%), Positives = 158/306 (51%), Gaps = 6/306 (1%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L A+ W L + QW ++ + AW++ E L LG +P +A L Sbjct: 14 LDEAAEWLVRLQDSGCTDDTRQACAQWRQRSPQHAHAWERAERLLQCLGRLPPALALPTL 73 Query: 73 HDTR-LTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 R L RR +K L L+LG G WQ+E AD RT G R L DGSLLT Sbjct: 74 GRERGLDRRRAIKHLALVLGGASLGLATWQAEPLRDWLADQRTGVGEQRRLTLPDGSLLT 133 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD 190 LNT SA D+ FDA QR VRL GEI + + D RPFRV T + +L A F VRQ+ Sbjct: 134 LNTDSAVDLAFDASQRLVRLLRGEIFVDSRADP--RPFRVATAEARLHAGAARFNVRQEM 191 Query: 191 NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFS 250 T++ V VE L+ + R + +GES++ A D +WT+ +L Sbjct: 192 AATRVAVLAGRVE--LSPLHGRGRWLESGESVRLGADGEARRLAFDGLPDAWTRGMLMAD 249 Query: 251 DKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 PL EV+A L RYR GVLRCDP +A L +SG +PL + L ++ T P+K++ +T Y Sbjct: 250 RMPLAEVLAELARYRRGVLRCDPQLARLAVSGAYPLLDLRRTLGMLQATYPLKVRGVTDY 309 Query: 311 WINISP 316 WI++ P Sbjct: 310 WISLVP 315 >UniRef50_UPI00016AFA6E putative FecR protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFA6E Length = 337 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 113/318 (35%), Positives = 167/318 (52%), Gaps = 16/318 (5%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 ++L A++WYA+L + S + W QW + +++ AW VE + + + G+ A+ Sbjct: 19 ESLEQAANWYALLHADGGSGEHRPAWAQWLAERPEHRRAWAHVEAVSLRFEPLRGESAAE 78 Query: 71 A--------LHDTRL-TRRHVMKGLLLLLGAG-GGWQLWQ----SETGEGLRADYRTAKG 116 + TR +RRHV+ L L G G GW W E LR+DYRT G Sbjct: 79 RNAAAAAVHVSSTRAASRRHVLGSLAALAGTGLAGWLAWHFTPLPERIVALRSDYRTGIG 138 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 QL DG+ + LN SA DV +D +R + L GEI I TAKD RPF V T G+ Sbjct: 139 ERRDVQLADGTRVWLNANSAFDVHYDDTRRLLTLTMGEILIDTAKDRQGRPFFVDTPNGR 198 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 + ALGT FTVRQ D T L V VE+ + IV AG+ QF+A A + D Sbjct: 199 MQALGTRFTVRQSDTHTLLAVFNGRVEI--RNRAGHVEIVPAGQQRQFTAEAILAPERAD 256 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 +W++ ++ D LG +IA L RY++G + DP+VAG+R+ G FP N +L ++ Sbjct: 257 PAREAWSRGVILADDVTLGALIAELDRYQHGHIGVDPSVAGIRVVGRFPADNPGRMLAML 316 Query: 297 AQTLPVKIQSITRYWINI 314 + LP++++ +W+ I Sbjct: 317 ERDLPIRVRRTLPWWVTI 334 >UniRef50_B4X4W9 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4W9_9GAMM Length = 327 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 110/323 (34%), Positives = 164/323 (50%), Gaps = 28/323 (8%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS--- 69 L+ A+ W+A + E V Q +WQ W ++Q AW VE + + + Sbjct: 12 LQQAAQWFATMLDEDVRQQDRDQWQAWLNAHPEHQRAWHYVEQVGQRFQQAQQQAGTTGA 71 Query: 70 -RALHDTR---LTRRHVMKGLLLLLGAG----GGWQLWQSETGEG--------LRADYRT 113 + +HDTR +TRR LLG+G W +W T G L ADYRT Sbjct: 72 RQIIHDTRSSRITRR-------TLLGSGLASVATWLIWSQTTLPGTARQLAHTLSADYRT 124 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 A G + L DG L LNT +A D+ + R ++L GEI I TAKDAL RPF V T Sbjct: 125 ATGEQRQLTLSDGGQLWLNTATAVDISYTDTIRHIKLRDGEILIETAKDALARPFVVTTL 184 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 QG L ALGT F+V+Q+D TQ+ V + AVE+ + Q+ + AGE F+AS Sbjct: 185 QGSLRALGTRFSVQQRDANTQISVYEGAVEI--NATTGQRLTLQAGEQTSFTASAIAKPH 242 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 +W + ++ + L E++ L+RYR+G L D +VA L++ GT+P+ D L Sbjct: 243 KAQHSRVAWQQGLIVADNISLQELVEELSRYRHGYLAVDASVANLKVMGTYPIDKPDHTL 302 Query: 294 NVIAQTLPVKIQSITRYWINISP 316 ++ LP++ + + +W+ + P Sbjct: 303 TMLENALPIRTRRVLPWWVTLEP 325 >UniRef50_B7WXN1 Anti-FecI sigma factor, FecR n=2 Tax=Comamonas testosteroni RepID=B7WXN1_COMTE Length = 317 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 110/310 (35%), Positives = 165/310 (53%), Gaps = 7/310 (2%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L A+ W L+ E ++ + A +++W +++ AW + E L +LGG+P +A L Sbjct: 6 LDEAADWLVRLNDEGLTAAEHAAFERWRHTSAEHEGAWMRAERLMGKLGGLPTALAMPTL 65 Query: 73 HDTRLTRRHVMKGLLLLLGAG--GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 ++ R L +L A GGW W+ +G AD RT G L DGS L Sbjct: 66 DRSQRRSRRAAVARLAVLLAAVPGGWMSWRMAQQQGWTADLRTVTGEQRSVTLADGSRLL 125 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTALGTEFTVRQ 188 L+T SA D+RFDAHQR + L G I + TA D + RP V T G+L ALGT F+V+Q Sbjct: 126 LDTASAVDIRFDAHQRLIHLRRGSILLETAADPSGVDRPLLVATAVGRLRALGTRFSVQQ 185 Query: 189 --QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 + F L V Q AVEV +A ++V AG + +A GA++ + +W + + Sbjct: 186 DSEGQFVDLAVTQGAVEVTPHAASRPAQVVPAGNWARLTAQGAGALQTASAQQLAWAQGM 245 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 L P+ EV A L RYR+G+L C P V +++SG +PL +TD L ++A+T V + Sbjct: 246 LVADAMPMAEVCARLARYRSGLLHCAPEVMAIKVSGAYPLADTDRALAMLAETYAVSVHQ 305 Query: 307 ITR-YWINIS 315 R YW+ ++ Sbjct: 306 RWRGYWVTVA 315 >UniRef50_B0KNB6 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KNB6_PSEPG Length = 314 Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 108/281 (38%), Positives = 148/281 (52%), Gaps = 3/281 (1%) Query: 37 QQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL-HDTRLTRRHVMKGLLLLLGAGGG 95 Q+W ++ AWQ++ +LG +P AS+AL + R T + LL G Sbjct: 35 QRWRGLHPSHEQAWQRLAVFDGRLGAMPPPQASQALRYRDRRTVLKGLALLLGGSAVVGS 94 Query: 96 WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEI 155 L G A RTA G R QL DG L +N+ SA D+ FD+ QR + L GE+ Sbjct: 95 ASL--GMRGSPWLAGQRTAMGERRRLQLPDGGWLQMNSGSALDLAFDSQQRRINLLAGEV 152 Query: 156 AITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI 215 I T K +RPF V T G L ALGT F+VR D L V++ AV V + + Sbjct: 153 MIQTGKQGAERPFWVETPLGTLQALGTGFSVRLNDESALLAVEEGAVAVRPGTLLQSAAV 212 Query: 216 VNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV 275 + AGE ++F+ A +PLD ++ +W L PL + A L RYRNGVLRCDPAV Sbjct: 213 IRAGEQVRFNRQRVFATQPLDRDALAWRDGYLVVRQWPLARLCAELGRYRNGVLRCDPAV 272 Query: 276 AGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 A L +SG FPL D L + +TLPV+ + +TR+W+ + P Sbjct: 273 ADLLISGVFPLDEPDRALAALGRTLPVRTRYLTRWWVTLEP 313 >UniRef50_Q88Q30 Transmembrane sensor, putative n=1 Tax=Pseudomonas putida KT2440 RepID=Q88Q30_PSEPK Length = 321 Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 110/314 (35%), Positives = 164/314 (52%), Gaps = 12/314 (3%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA-SRA 71 L++A+ W+A L +A+W W +D ++ AW VEN+ + GG+ G +R Sbjct: 11 LQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVENINQRFGGLSGQAEQARQ 70 Query: 72 LHDT----RLTRRHVMKGLLLLLGAG----GGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 + D+ R +RR V+ L + AG GGWQ ++ A YRT G V L Sbjct: 71 VFDSVRRDRHSRRAVLGSLCVAGVAGVLGWGGWQRGWVDSPRAWFATYRTGLGEVRPVTL 130 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS L LN +A DV+FD R +RL+ GEI I + KD RP V+TR G++ LGT Sbjct: 131 ADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGKDP--RPLSVVTRAGRVQPLGTR 188 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F+VR Q T L V AV+ S ++ + AG+ + F A + GA W+ Sbjct: 189 FSVRDQGLQTTLSVFAGAVQAT-CSGSGRQTTLQAGQMMVFDAQQVGAPSTAQRLREDWS 247 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + +L D PL ++I L YR+G L DPA+ LR GTFPL +TD L ++ + LP++ Sbjct: 248 RGVLVAEDMPLVQMIDILRDYRHGHLGIDPAIGSLRAVGTFPLLDTDRALAMLERALPIR 307 Query: 304 IQSITRYWINISPL 317 + +W++I + Sbjct: 308 VVRTLPWWVSIEAV 321 >UniRef50_B8ECR9 Anti-FecI sigma factor, FecR n=3 Tax=Shewanella baltica RepID=B8ECR9_SHEB2 Length = 329 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 109/311 (35%), Positives = 162/311 (52%), Gaps = 8/311 (2%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA 71 A+ +A+ W A L + + Q QQW +Q ++ AWQ++ + + +P + Sbjct: 19 AIEAAAGWMARLLADDATEQDSINCQQWRDQSSLHEQAWQRMCQITGKFASLPKGTGIQV 78 Query: 72 LHDTR---LTRRHVMKGLLLL-LGAGGGWQLWQSET--GEGLRADYRTAKGTVSRQQLED 125 L ++RR + L L +G W L S+T G L+A YRT LED Sbjct: 79 LEKVSQSVVSRRRFLNVLALAGIGVTATW-LGASQTRLGRSLQAQYRTGANETRTFTLED 137 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 G+ LTLN +A DV F A +R ++L GEI I T ++ +R F V T GQLTALGTEF Sbjct: 138 GTRLTLNIDTAVDVDFSAEKRQIQLHQGEILIKTGHESPRRQFLVTTHFGQLTALGTEFC 197 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VRQ +++ ++ V + AVE AS +R V+AG+ +F + KPL + + SW Sbjct: 198 VRQYEHYARVAVTEGAVEAYAASGVKPQR-VDAGQQTRFDKTMIAPPKPLQNAAISWRHG 256 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 L + + I + RYR G D AVA L +SG F L++TD L +A +L V++Q Sbjct: 257 KLVAEGMRVADFIEEIGRYRPGFTLYDSAVANLTISGVFSLQDTDLALQSLASSLSVELQ 316 Query: 306 SITRYWINISP 316 T YW+ + P Sbjct: 317 YRTAYWVKVIP 327 >UniRef50_A6VD04 Probable transmembrane sensor n=6 Tax=Pseudomonas RepID=A6VD04_PSEA7 Length = 340 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 107/305 (35%), Positives = 171/305 (56%), Gaps = 15/305 (4%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 Q L A+ W ++ ++P Q+A + W + ++Q AW++ E L +G +P +A R Sbjct: 29 QVLGEAASWLLLMQEGPLAPAQQAELESWRLRSAEHQRAWRRAERLLANIGSLPPALARR 88 Query: 71 ALHDTRLT-RRHVMKGLLLLLGAGG----GW--QLWQSETGEGLRADYRTAKGTVSRQQL 123 L + RR V++GL L +G GW Q W+ +G AD+ TA G L Sbjct: 89 TLERPGGSGRRAVLRGLALFIGGAPLAWWGWRAQFWR----DGFGADHLTAVGERRHLTL 144 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALG 181 EDGS + +NT SA D+R+DA QR +RL+ GEI + TA D + RPF V T QG + ALG Sbjct: 145 EDGSQVEMNTDSALDLRYDAGQRLLRLYRGEIYLRTAADRREPPRPFLVRTEQGLMRALG 204 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLL--ASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 T F+VR++ T L V + AV+V A++ A R++ AG+ ++F GAV+ + + Sbjct: 205 TAFSVRREGTETVLAVYEGAVQVRPEDAASAADGRVIEAGQRVRFDRQRIGAVESAGEAA 264 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W + +L + PL + L RY + + C+P++ LR+SGTFP+ + L ++AQT Sbjct: 265 LAWRQGLLVADEMPLRQWAGELMRYGSESIECEPSLGPLRVSGTFPVDDLPLALAMLAQT 324 Query: 300 LPVKI 304 +++ Sbjct: 325 HGLRL 329 >UniRef50_Q4KBG4 Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Pseudomonas fluorescens RepID=Q4KBG4_PSEF5 Length = 325 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 123/317 (38%), Positives = 174/317 (54%), Gaps = 18/317 (5%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP------G 65 L+ A+HWY L + S +Q +WQ W+EQ +++ AW VE + +L +P Sbjct: 13 CLQQAAHWYVQLQDQGSSDEQRRQWQDWFEQSAEHRQAWSYVERVSQRL--LPLQEANTR 70 Query: 66 DVASRALHDTR---LTRRHVMKGLLLLLGAGGGWQLWQSETGEGL---RADYRTAKGTVS 119 ASRAL R L RR V+ LLL G W+ S + L RADY T G V Sbjct: 71 PSASRALSAARHPVLARRQVLGALLLAGLGWGTWR--NSPLPQALSRWRADYATGTGEVR 128 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L DG+ L LN SA DVR+ QR + L GEI I TAKD +RPF V T G+L A Sbjct: 129 DTLLSDGTRLWLNALSAVDVRYSTEQRLLALHLGEILIDTAKDP-RRPFLVQTEHGRLRA 187 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F+VR + + L+V AVEV AS Q ++VNAG+ L+F G ++ Sbjct: 188 LGTRFSVRCGASDSLLNVYAGAVEVRSASG-LQVQVVNAGQQLRFDGRTLGPLQAASAAR 246 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W+ +L + PL +++ L RYRNG L CDPA+A L + G+FPL ++D L ++ Sbjct: 247 EAWSHGLLLADNLPLEQLLEELGRYRNGHLGCDPAIAQLPVMGSFPLHDSDQALALLEAA 306 Query: 300 LPVKIQSITRYWINISP 316 LPV+++ + +W+ + P Sbjct: 307 LPVRVKRLASWWVTLEP 323 >UniRef50_B8L6A8 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6A8_9GAMM Length = 322 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 117/307 (38%), Positives = 168/307 (54%), Gaps = 10/307 (3%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L A+ W L E S + A+WQ W++ D + AWQ+ E L VP +A R L Sbjct: 16 LEQAADWMMRLH-EDDSAARRAQWQHWHDADPAHARAWQRAERLLALTAQVPTALAQRTL 74 Query: 73 HD-TRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 RR V++G+ LL A GGW W+ A RTA G S+Q L+DGS+L Sbjct: 75 QPPASAGRRAVLRGVAALLVAPLGGWLAWRLWDDAAWDASARTAMGERSQQVLDDGSVLH 134 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEFTVRQ 188 L+T +A D+ FDAH R +RL +G++ + TA D + RPFRV T G L ALGT F+VR Sbjct: 135 LDTSTAVDIAFDAHARLLRLRHGQMLVETAADPQRPARPFRVATPYGTLQALGTRFSVRL 194 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 L VQ AV + S P Q+R V+AG+ L+++ + KP + +W + +L Sbjct: 195 FAEDALLVVQHGAVRI---STPGQQRQVDAGQQLRWNLTRLPPPKPAPPGADAWVRGMLV 251 Query: 249 FSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 PL +V+ L RY++ LR DP VAGL +SG FPL + L+++A T ++I+ Sbjct: 252 ADAMPLQQVLQELGRYQHRWLRVDPRVAGLPVSGAFPLDDLQRSLSMLAATHALRIEQ-- 309 Query: 309 RYWINIS 315 WI++S Sbjct: 310 GLWIHVS 316 >UniRef50_D0J628 Putative FecR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J628_COMTE Length = 338 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 117/333 (35%), Positives = 162/333 (48%), Gaps = 20/333 (6%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL-- 60 P D A R A+ W L A +W D ++ AWQ+ E + +L Sbjct: 6 PSALDIDPSAARQAAQWLVRLHAGDADKTVHAELMRWRNSDPSHEMAWQRAELVLGKLNA 65 Query: 61 ---------GGVPGDVASRALHDT-RLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRA 109 G G +++ AL + R RR V + L + AG G+ +W+ A Sbjct: 66 TRAGNSAEAGNTLGGLSAAALREANRSQRRAVARLLATAIVAGPIGYGVWRLAPWHAWSA 125 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 D RT G L DGS + L+T SA D+ F + +R + L G I + TA DA RPF Sbjct: 126 DMRTDTGESRESTLADGSRIQLDTGSAVDMAFTSSERRLILRAGAIWVQTAADAALRPFL 185 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQ------LDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 V T QG + ALGT FTVR F + + VQQ AVE+ + RI +AG+ Q Sbjct: 186 VQTAQGTVRALGTRFTVRIAPPFARTEYSCLIAVQQGAVELSPVNDDTSVRI-DAGKQAQ 244 Query: 224 FSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGT 283 SA G + S WT +L PLG A L+RYR G++RCDPAVA L +SG Sbjct: 245 MSAGNVGVPEAAGLASDGWTHGVLYAEKTPLGIFAAELSRYRPGIVRCDPAVAALPVSGA 304 Query: 284 FPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 F L++TD L +A ++P++I +RYW+ I P Sbjct: 305 FQLRDTDQALAALAASMPIRILQRSRYWVTIVP 337 >UniRef50_A4VS46 Probable transmembrane sensor n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VS46_PSEU5 Length = 320 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 110/318 (34%), Positives = 162/318 (50%), Gaps = 24/318 (7%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA- 71 L+ A+ W+A+L VS + W W EQ + Q AW +VE + Q + D RA Sbjct: 8 LQQAAEWFALLQSGSVSASERRAWAAWLEQPEHAQ-AWAKVERISGQFQPLTSDAIGRAA 66 Query: 72 ---LHDTRLTRRHVMKGLLLLLG------AGGG--WQLWQSETGEGLRADYRTAKGTVSR 120 L + TRR +K L +L G AGG WQ W AD RTA G V Sbjct: 67 GAMLQQRQSTRRQALKVLSVLCGGAVLTVAGGALPWQRWA--------ADERTAVGEVRD 118 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL-TA 179 +L DG+ L LNT SA D+RFDA +R + L +GE+ I RP + +R+G + + Sbjct: 119 LRLADGTRLWLNTDSALDIRFDAKERRLALRHGELLIDAPASRRGRPLVLSSREGHVRSE 178 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 F++RQ++ T+L V V++ L V AG+ F G + E Sbjct: 179 QAARFSLRQEEGRTRLSVFAGVVDIQLEGFGVTS--VPAGQQAAFDRRHVGPLAAARAEH 236 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W +L ++ L + +A L+RYR+G L CDP +A LR+ G FPL +TD +L +A T Sbjct: 237 QAWATGVLLADNQRLEDFLAELSRYRHGYLGCDPRIADLRVVGAFPLADTDRVLQALAAT 296 Query: 300 LPVKIQSITRYWINISPL 317 LPV+I+ +W+++ PL Sbjct: 297 LPVRIERRMAWWVSLEPL 314 >UniRef50_Q82SB2 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82SB2_NITEU Length = 338 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/309 (34%), Positives = 157/309 (50%), Gaps = 5/309 (1%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS--R 70 L+ A W + + + RWQ W D + AW QV+ QL + A R Sbjct: 26 LQQALQWQVIFWSGEATDRDRMRWQSWLAADPAHARAWAQVQRTDEQLQTLASPAAEVLR 85 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGG--GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 + R R + G+ LL G G L Q+ + + AD T G +L DG+ Sbjct: 86 SADARRCKARRTVLGMAGLLAGAGIMGCGLRQTAQWQMMMADDHTGYGERRNIELADGTQ 145 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ 188 +TL + +A DV + A R + L GEI I TA D+ RPF V T +G + ALGT F VR+ Sbjct: 146 VTLGSATAIDVCYSAQARQLLLRTGEIFIVTAPDSADRPFLVQTTRGSVQALGTRFNVRE 205 Query: 189 QDNFTQLDVQQHAVEVLLASA-PAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 Q+ VQ AV + A P ++AG+ F ++ A + L +T+WT+ +L Sbjct: 206 SGEQIQVAVQDGAVAIRPAGMNPGDVVRLDAGQQTCFDHTKVEAAEALQISATAWTRGLL 265 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 L + + L RYR+GVLRCDPAV L +SG + L +TD L ++AQ LPV++Q++ Sbjct: 266 VAERMRLEDFLVELGRYRSGVLRCDPAVRDLIVSGVYSLDDTDQSLRLLAQALPVQVQTV 325 Query: 308 TRYWINISP 316 TR+W + P Sbjct: 326 TRWWTIVGP 334 >UniRef50_Q39ES0 Putative FecR n=1 Tax=Burkholderia sp. 383 RepID=Q39ES0_BURS3 Length = 321 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 109/306 (35%), Positives = 151/306 (49%), Gaps = 13/306 (4%) Query: 19 WYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLT 78 W A L + R W + +++ AWQ++ + +LG VP D A L Sbjct: 20 WLARLWSGDATDDNRRRCAAWRAEHPEHERAWQRLAGIDAKLGSVPADTARGVLLAQPAR 79 Query: 79 RRHVMKGLLL-----LLGAGGGWQ---LWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 L L GA G + LWQS T +DY + G V L DG+ + Sbjct: 80 PARRRAMRALGWAITLGGASYGVRSTRLWQSAT-----SDYASGVGEVRDVTLADGTRVW 134 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD 190 L+T+SA DVRFDA +R + L G + + TA D RP RV RQG ALGT FT + Sbjct: 135 LDTESAIDVRFDARERRIVLVRGAVHVETAHDTAGRPLRVEMRQGMARALGTRFTASDEG 194 Query: 191 NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFS 250 ++DV AVE+ A A + + AGE+++F A F +P D +++WT+ L Sbjct: 195 MRARVDVFDGAVEIRPARAADRLLRLEAGEAVRFDADGFAPREPADVRASAWTQGRLIAE 254 Query: 251 DKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 + A L RYR GVLRCDPA+A L +SG F L +TD L + LPV + TRY Sbjct: 255 RMRVDAWCAELARYRPGVLRCDPALARLSVSGVFSLTDTDRALASLRTALPVDVVYRTRY 314 Query: 311 WINISP 316 W+ + P Sbjct: 315 WVTVVP 320 >UniRef50_A1K836 Putative transmembrane sensor n=1 Tax=Azoarcus sp. BH72 RepID=A1K836_AZOSB Length = 328 Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 106/299 (35%), Positives = 159/299 (53%), Gaps = 5/299 (1%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA 71 AL A+ W+ +L+ + RW W ++ AWQ+VE+L + VP AS A Sbjct: 19 ALEQAAEWFVLLASGEADAEDHRRWLAWRAGCPSHEAAWQRVESLSGRFREVPPPFASVA 78 Query: 72 LHDTR--LTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 + RR +K L +LL G G W + +S G A TA G L DGS Sbjct: 79 IVGPSRGAGRRRALKQLAVLLATGAGAWGVQRSYQGMVWSASATTAIGEQRDWVLADGSR 138 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQLTALGTEFTV 186 LTL+T SA V F QR +RL G + + TA D + R V T QG++ ALGT F+V Sbjct: 139 LTLDTDSALAVDFGLGQRLIRLQRGRVLVETAPDPAPIARSIAVETAQGRVIALGTRFSV 198 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 RQ+ +Q+ V + V++ A I+ AG++++F+ + F +PL T+W K + Sbjct: 199 RQEAGTSQVVVLEARVDIRPADNANAGTILAAGDAVRFTRAGFKDRQPLGLHDTAWAKGL 258 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 L + L ++ A L+RYR L CDP +A LR+SG FPL+++DA L + +LPV+++ Sbjct: 259 LMADNWSLLDLAAELSRYRRQPLSCDPRIAALRISGVFPLRDSDAALAAVTDSLPVRVE 317 >UniRef50_C9NLK7 Transmembrane sensor n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NLK7_9VIBR Length = 314 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 102/316 (32%), Positives = 172/316 (54%), Gaps = 21/316 (6%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 R+++ AS W A + + V+ Q + + W + DN +AW+Q+E+L+ + +P + Sbjct: 6 RKSIEQASLWMARMWSDDVTEQDKRAFHLWRTRHPDNDYAWRQMESLQQKFTSLPDPQSG 65 Query: 70 RALHDT---RLTRRHVM-------KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 + T R++RR V+ + L+L + + Q ET +Y +A G V Sbjct: 66 SKVLGTYRQRVSRRQVLIWGGVSLATMSLVLSSDAA--MPQGET------EYASATGEVK 117 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 +L DG+++ LNT S V F+ HQR +RL GEI +TT PF V+T QG +T Sbjct: 118 PIKLSDGTVVVLNTASRMRVDFNQHQRVIRLMEGEIMVTTGHHLT--PFHVITPQGSVTP 175 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 +GT+F+VR + T++ V + V + + AQ + + AGE +FSA G + L Sbjct: 176 IGTKFSVRLEPEQTRVSVFEGEV-IAKSQRQAQGQHLLAGEKSEFSAYHQGRKQSLLATD 234 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 W ++ + D PL E IA L+RYR GV++ P ++ LR+SG + +++TD L + Q Sbjct: 235 ALWLEEKILAHDTPLPEFIAELSRYRRGVIKVSPELSALRISGVYSIRDTDQTLENLRQI 294 Query: 300 LPVKIQSITRYWINIS 315 LP+++ TR+W++I+ Sbjct: 295 LPIEVHFRTRFWVSIA 310 >UniRef50_C6XBX0 Anti-FecI sigma factor, FecR n=4 Tax=Proteobacteria RepID=C6XBX0_METSD Length = 333 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 114/314 (36%), Positives = 160/314 (50%), Gaps = 14/314 (4%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR-- 70 L A+ WYA L S + ARWQ W +++Q AWQ VE++ L + V R Sbjct: 18 LTQAAEWYARLRDGSASSHETARWQAWLHAAEEHQAAWQYVEDISRGLDPLRTTVDPRQT 77 Query: 71 -----ALHDTRLTRRHVMKGLLLLLGAGG-GWQLW-QSETGEGL---RADYRTAKGTVSR 120 H TRR V+ L L G G W QS + AD+RT G Sbjct: 78 THALTKAHARLHTRRRVLITLAALASGGTLGLLSWRQSMLPASMLAWTADHRTPTGEQRT 137 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DG+ L LNT SA +V F A +R + L GE+ I TA D RPF V T G++ AL Sbjct: 138 LTLADGTQLWLNTASALNVHFSASERRIELVQGEVFIETAHDE-TRPFLVETPHGRMRAL 196 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F V + TQLDV AVE+ AS+ A R+V AG+ +F ++ A+ Sbjct: 197 GTRFNVYLNEAHTQLDVYAGAVEIRTASS-AISRVVRAGQQSRFDRADITAMATAGAARE 255 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +WT+ IL + PL +V+ L RYR G L VA L++ G+FPL++TD +L ++A L Sbjct: 256 AWTQGILVADNIPLRDVVQELRRYRPGHLGVADGVAELKVYGSFPLQDTDRVLRMLASAL 315 Query: 301 PVKIQSITRYWINI 314 P++++ +W + Sbjct: 316 PIRVEQPLPWWTTL 329 >UniRef50_C3K7W7 Putative iron uptake regulator protein n=2 Tax=Proteobacteria RepID=C3K7W7_PSEFS Length = 317 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 111/313 (35%), Positives = 159/313 (50%), Gaps = 15/313 (4%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L A+ W L + + QW + + AWQ+ E + VPG +A L Sbjct: 10 LGEAADWMVQLQSGSATDEDRRAIAQWQGRSAQHAQAWQRAEAILGDFNSVPGAIAGDTL 69 Query: 73 ----HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 L RR + LLL A W ++ + + AD TA G L DG+ Sbjct: 70 KRIGRKQSLGRRQALGLLLLAGPAT--WLAYRQKPWQPWTADQHTAIGEQRHLTLPDGTR 127 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALGTEFTV 186 L +NT S+ ++ F R + L GE+ ITTAKD R F V TR G ALGT F+V Sbjct: 128 LLINTASSLNIAFTDQVRRIELLQGEVMITTAKDPAPRHRAFIVQTRHGTARALGTHFSV 187 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKR---IVNAGESLQFSASEFGAVKPLDDESTSWT 243 R + +++ V AVE+L P R I+ AGE F + AV+PL+ +T+W Sbjct: 188 RVAEQSSRVAVLDGAVEML----PEHARHGLILKAGEQSAFGSDGVAAVQPLEISATTWE 243 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 +L L +++ L RYR+GVLRC +VAGL +SG FPL++TDA L ++ +TLPVK Sbjct: 244 NGMLLAQQMRLADLLDELGRYRHGVLRCHDSVAGLTVSGAFPLRDTDASLRLLQETLPVK 303 Query: 304 IQSITRYWINISP 316 + S+T YW+ + P Sbjct: 304 VSSLTGYWVTVEP 316 >UniRef50_A3NJI2 Sigma factor regulatory protein, FecR/PupR family n=38 Tax=Burkholderiaceae RepID=A3NJI2_BURP6 Length = 334 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 109/319 (34%), Positives = 166/319 (52%), Gaps = 26/319 (8%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R A W+ L S AR +W + + AW+ +E + +LG V +++RA Sbjct: 19 RRAVQWWVELGAAPASDAMRARLARWRAEHPAHDAAWRHIEAVNGRLGHVASALSARAAR 78 Query: 74 DTRLT-----RRHVMKGLLLLLGAGGG---------WQLWQSETGEGLRADYRTAKGTVS 119 L RR +K L +LL AGGG W+ W AD RTA G Sbjct: 79 AALLPPRSRGRRAALKALAVLLFAGGGAWTGQAYLPWRAWG--------ADVRTALGERR 130 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA---LQRPFRVLTRQGQ 176 L DG+ + LNT +A D+RFD R VRL GEI +T+ +DA + R + T G Sbjct: 131 TITLADGTTVVLNTDTAIDIRFDDATRGVRLLRGEIMVTSGRDAARAVPRALVIATAHGD 190 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF-GAVKPL 235 + +GT F+VR++ + T++DV AV + A + ++ AG F+ G + L Sbjct: 191 VRPVGTRFSVRERGDATRVDVFDGAVRIAPRRAVGRAPLITAGHGADFTRDALAGPPRVL 250 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W IL S+ L +++A + RYR G +RCD AVA LR+SGT+PL +TD IL+ Sbjct: 251 GASAGAWVDGILVASNLRLADLLAEIDRYRPGRVRCDAAVANLRVSGTYPLDDTDRILDT 310 Query: 296 IAQTLPVKIQSITRYWINI 314 + +TLPV ++ ++RYW+ + Sbjct: 311 LRETLPVDVEYLSRYWVTV 329 >UniRef50_A9BUB2 Anti-FecI sigma factor, FecR n=5 Tax=Proteobacteria RepID=A9BUB2_DELAS Length = 356 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 110/315 (34%), Positives = 164/315 (52%), Gaps = 14/315 (4%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV-PGDVASRAL 72 R+A+ W+A+L + S ARWQ+W ++D D+ AW ++ + L G+ PG R L Sbjct: 39 RAAAGWFALLQSGQASAADRARWQRWLDEDADHGRAWAHLQAVTGALTGLNPGGAGYRGL 98 Query: 73 HDTRLTRRHVMKGLLLLLGAGGG--WQLWQSETGEGLRADYRTAKGTVSRQ-QLEDGSLL 129 R + GL LG G W ++ + + ADY A GT R+ L DG+ + Sbjct: 99 SAAPRAARRRLLGLFAGLGTAAGAGWLASRTPQWQQMAADY--ASGTQRRRWTLPDGTDM 156 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL---QRPFRVLTRQGQLTALGTEFTV 186 L SA ++FD +R +RL GE TT A PF V T G++ ALGT F V Sbjct: 157 LLGPGSAVALQFDGSERRLRLMAGEALFTTGHPAGTLGDLPFVVETAHGRVRALGTRFMV 216 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 R ++ V + AVE+ A A R + AGE++ F+ + + V+P +W++ Sbjct: 217 RSSHAGARVAVFERAVELRPAGTGASARRLQAGEAMDFTRTGWSTVQPAGPADDAWSRGQ 276 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPL-----KNTDAILNVIAQTLP 301 L ++ L + +A L RYR G L DPAVAGLR SG FPL TDA+L ++ LP Sbjct: 277 LWVDNQRLDDFLAELNRYRPGWLHADPAVAGLRFSGVFPLDEGGIDGTDAVLAMLPGALP 336 Query: 302 VKIQSITRYWINISP 316 V+++ TR+W+ + P Sbjct: 337 VQLRWRTRWWVVVEP 351 >UniRef50_A6SZM2 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZM2_JANMA Length = 329 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 107/323 (33%), Positives = 158/323 (48%), Gaps = 22/323 (6%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P +TD + +A W L P Q ++QW QD + A + +E + Sbjct: 11 PAVTDP---IVEAAIDWIICLRSGDAGPVQYEAFKQWRLQDVRHDTAIRHLEQVLGTFDS 67 Query: 63 VPGDVASRALHDTRLTRRHVMKG-----------LLLLLGAGGGWQLWQSETGEGLRADY 111 +P + H RR ++K LLL+G+G G + + AD Sbjct: 68 LPA-----SSHVRSSARRALLKSPDRRKLLRNTLALLLVGSGTGLLAQRITPLNTVTADL 122 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT+ G L DGS + LN +SAAD+ FD R + L GEI + A DA QRPF V Sbjct: 123 RTSTGQRKHMHLADGSQIWLNARSAADIDFDESTRRIHLRSGEIVVDVAADA-QRPFIVE 181 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 + +G + ALGT F VRQ++ T L V +V + + R + AGE+ +F S+ Sbjct: 182 SAEGSMRALGTRFLVRQEEGATVLAVLHSSVRI--DAKDGASRTLVAGETARFDQSQITV 239 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 + + +W + D+PL EVIA + YR+G LR P LR++GTFPL ++ Sbjct: 240 IDTASGAAAAWVDGFIEVHDRPLSEVIAAMRPYRSGFLRVTPQAGALRVTGTFPLDDSKR 299 Query: 292 ILNVIAQTLPVKIQSITRYWINI 314 L +A+TLP+ I+S T YWI+I Sbjct: 300 TLAALAETLPIVIRSRTDYWISI 322 >UniRef50_Q1LER3 Putative FecR n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LER3_RALME Length = 328 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 107/320 (33%), Positives = 159/320 (49%), Gaps = 20/320 (6%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + + +A W L S + R+ W D ++ AWQ++++LR+ VP +A Sbjct: 11 EVIDAAIDWAIRLLFNEPSDEMRQRFLVWEGADPRHRLAWQRIQSLRDGFPRVPATLAVE 70 Query: 71 ALHDTRLTRRHVMKGL-----LLLLGAGGGWQL---WQSETGEGLRADYRTAKGTVSRQQ 122 L + R G LL LG + L ++ AD T G R Sbjct: 71 TLRNAETIRGRRQAGRRQAIKLLALGGVSAFGLSMAYRESPWRSWAADVHTGVGEQRRLA 130 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA-LQRPFRVLTRQGQLTALG 181 LEDG+++ LNT++A D+RFD R V L GEI +TT D RPFRV T G + ALG Sbjct: 131 LEDGTVVVLNTETALDIRFDGQHRDVLLRRGEILVTTGHDGDAARPFRVQTPFGAMRALG 190 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS-----ASEFGAVKPLD 236 T F VR + + + VQQ AV + AP+Q + G + + S+ A+ P Sbjct: 191 TRFAVRLEADRACVSVQQGAVALHDGKAPSQA-VATPGTTWTMTQDTSALSDAAALSP-- 247 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 SW +LS S+ L +V+A L RYR+G + CDPAVA L +SG + + +TD L + Sbjct: 248 ---DSWANGLLSGSNMRLADVLAELARYRHGRIDCDPAVADLVISGAYRIDDTDRTLRFL 304 Query: 297 AQTLPVKIQSITRYWINISP 316 + LP+++ TRYW+ + P Sbjct: 305 EKALPIRVSYFTRYWVRVGP 324 >UniRef50_Q48ML1 Sigma factor regulatory protein, FecR/PupR family n=13 Tax=Pseudomonas RepID=Q48ML1_PSE14 Length = 325 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 102/283 (36%), Positives = 154/283 (54%), Gaps = 6/283 (2%) Query: 36 WQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTR-LTRRHVMKGLLLLLGAGG 94 WQ W + ++Q AW ++ + +L G+ +A AL+ + +RRH +K LLLL Sbjct: 41 WQLWLNGNAEHQRAWAHMQRVNQRLSGLSSPLAHAALNAPKSASRRHALKLLLLLGAGSA 100 Query: 95 G-WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYG 153 W L + + L ADY + G + L DGS + LNT SA DVRFDA QR ++L G Sbjct: 101 AGWSLREQIALQPLLADYNSGVGEQRKVALSDGSQVQLNTASAVDVRFDAQQRLIKLLQG 160 Query: 154 EIAITTAKDALQRPFRVLTRQGQLTAL--GTEFTVRQQDNFTQLDVQQHAVEVLLASAPA 211 EI I+ + D+ RP +L+ +G + A + F +RQ D TQL V A+E+ Sbjct: 161 EILISASADS--RPLSLLSTEGTVRASTGASRFNLRQLDGRTQLAVFAGALEIAPLGRSG 218 Query: 212 QKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC 271 ++ A + FS + +VKP+D S +W +L S L + +A L RYR G L C Sbjct: 219 PGLMLRASQQATFSRDAWDSVKPIDAGSGAWADGMLVASRMKLSDFLAELGRYRRGRLNC 278 Query: 272 DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 D VA L +SG +PL +++ IL+++ LPV +Q T YW+N+ Sbjct: 279 DAKVANLLISGNYPLADSERILDMLELALPVHVQRFTWYWVNV 321 >UniRef50_Q88IB4 Transmembrane sensor, putative n=3 Tax=Pseudomonas RepID=Q88IB4_PSEPK Length = 321 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 111/311 (35%), Positives = 152/311 (48%), Gaps = 9/311 (2%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP----GDVA 68 L A+ W L + Q W ++ + AWQ+ E + +P G+ Sbjct: 11 LGEAADWLVQLQSGTATEADHRAVQAWCKRSAQHAQAWQRAEAILGDFRRLPTPVTGETL 70 Query: 69 SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG-EGLRADYRTAKGTVSRQQLEDGS 127 R + ++RR + L L L A L ET + AD TA G L DGS Sbjct: 71 RRLSRNGAVSRRQALHRLGLWLLAAPAAWLAWRETPWQQWTADAHTAVGEQRTLTLADGS 130 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALGTEFT 185 + LNT +A D+ FDA QR + L GEI +T+AKD RP V T GQ TA GT F+ Sbjct: 131 QVLLNTDTAIDITFDARQRRIDLLAGEILLTSAKDPATPARPLSVRTPHGQATARGTRFS 190 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VR TQ+ V + AV+ A ++ AGE F PL+ +W Sbjct: 191 VRIHGPLTQVAVLEGAVDT--RPLHADSLLLKAGERSAFDGDRVLPASPLETGDLAWEHG 248 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 +L D L +++ L RYR GVLRC PAV L++SG FPL +TDA L +++ TLPV IQ Sbjct: 249 MLLARDMRLADLLQELARYRPGVLRCHPAVRELKVSGAFPLADTDASLRLLSDTLPVNIQ 308 Query: 306 SITRYWINISP 316 +TRYW+ + P Sbjct: 309 GMTRYWVTVEP 319 >UniRef50_B0KIQ3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIQ3_PSEPG Length = 317 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 110/322 (34%), Positives = 171/322 (53%), Gaps = 10/322 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ L +R +LR A+HW++ L+ V + WQ W N WAWQQ E L+ ++ Sbjct: 1 MSVHLDAEQRASLRQAAHWFSQLNSGDVQASDYSAWQLWLNATPVNSWAWQQAERLQTRM 60 Query: 61 GGVPGDVASRAL----HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGL-RADYRTAK 115 ++R L H +RR V+K L+LLG G E + AD RT Sbjct: 61 AASENPASARVLALAAHGRHASRRRVVKAGLVLLGGGALSLGGYREVKQSAWLADVRTGV 120 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G L +G+ + LNT SAADV +RL GE+ +T ++ +V+TR G Sbjct: 121 GEQRSLLLNNGTAVVLNTASAADVGDLREAPWLRLRQGELMVTVPA---RQTCKVVTRNG 177 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 + A + F VR ++ + L+V +V LAS Q + +G+ QF+ F +V+ + Sbjct: 178 TIEAGESRFAVRLFEDSSSLEVFAQQAQVKLASG--QTLQLASGQRCQFNEQGFSSVEAV 235 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W + +L +D+ L IA L+RYR G LRC +VAGLR+SGT+ L +TD IL Sbjct: 236 ALAADAWGQGLLIANDQRLDTFIANLSRYRPGWLRCAQSVAGLRISGTYKLSDTDQILRA 295 Query: 296 IAQTLPVKIQSITRYWINISPL 317 +A +LPV++Q+ TRYW+ ++ + Sbjct: 296 LATSLPVQVQARTRYWVTVTAV 317 >UniRef50_C1DJ04 Anti-sigma factor, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJ04_AZOVD Length = 313 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 146/289 (50%), Gaps = 18/289 (6%) Query: 36 WQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLG---- 91 WQ+W D +++ AWQ++E++ +L G+P A A+ L R + G+L L Sbjct: 32 WQRWRAADPEHERAWQRIESVNRRLRGLPPAAARAAVEGAPLHGRRQVLGMLGLAAVAVP 91 Query: 92 ----AGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRT 147 AGG + W ADYRTA G L DGS L+LNT SA ++R + R Sbjct: 92 GLWLAGGRARPWL--------ADYRTAVGERRDIGLADGSRLSLNTDSAVNLRLASDSRW 143 Query: 148 VRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA 207 + L GEI + A F + T QG L F +RQ + +L V V V A Sbjct: 144 LELLRGEIQLEVAPGTAS--FHIATAQGSLLVEQARFNLRQYADHCRLGVLDGTVRVRCA 201 Query: 208 SAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG 267 P + + AG+ ++F + GA +PLD +W +L D L + + L RY G Sbjct: 202 GHPDLQASLAAGQQIRFDSQRLGAPQPLDAAVAAWRDGMLVARDMRLADFLDELGRYHRG 261 Query: 268 VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 L CDP VA L LSGT+PL+++ AIL ++ LPV+I TR+WI++ P Sbjct: 262 WLGCDPRVANLHLSGTYPLRDSLAILAMLEVALPVRISQRTRWWISVQP 310 >UniRef50_D0S2I9 Transmembrane sensor n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S2I9_ACICA Length = 318 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 163/321 (50%), Gaps = 20/321 (6%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 +T L +A+ W +L ++ Q+ +++QW + +++Q A QQ+E + L + Sbjct: 4 ITKIPHHVLDAAADWLVLLHSGEMTALQQQQFEQWKAEKKEHQLALQQMEKFSHGLTNLA 63 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGG----------WQLWQSETGEGLRADYRTA 114 G+ S AL + K +LL +G W+ WQS DY T Sbjct: 64 GNFPSEALVQSNQKFNLAAKRNMLLSLSGLAIVGLSVYFIPWEKWQS--------DYHTK 115 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G + + L+DGS L + + D+ F R ++L GEI I TAKDA RPF V T+ Sbjct: 116 VGEIKKVSLKDGSQLIMASNCYIDINFTQETRQIKLIDGEIYIETAKDAQHRPFIVETKN 175 Query: 175 GQLTALGTEFTVRQQDNF-TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 G + ALGT+F+VRQ+ + T++ V +HAV + ++ ++++I+ G+ F Sbjct: 176 GSVEALGTQFSVRQESSEQTKVKVYKHAVAIEPENS-SKRQILKQGQRAFFDEKYISKSL 234 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 PLD++ WT+ +L PL +V+ L RY+ G DP + +++SG F LKN + L Sbjct: 235 PLDNDQPYWTQQLLVVDQWPLQKVLDELFRYKKGTYSIDPELKDIKISGVFSLKNPEQSL 294 Query: 294 NVIAQTLPVKIQSITRYWINI 314 +A + +++ + Y +NI Sbjct: 295 ETLAYSHQLELTYYSPYLLNI 315 >UniRef50_Q4ZTA2 FecR protein n=11 Tax=Pseudomonas RepID=Q4ZTA2_PSEU2 Length = 321 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 103/319 (32%), Positives = 160/319 (50%), Gaps = 12/319 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 + P ++ R+ +R A+ W A+L S + A Q W + ++ AWQ+ + LR + Sbjct: 2 IRPAPSNEEREVVRKAAQWLALLESGGASEEDHAMLQHWRDSSASHERAWQKAQQLRQRF 61 Query: 61 GGVPGDVASRALHDTRLTRRHVMK---GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 G+P ++A L RR +K G + L+ A W L + E RAD +TA G Sbjct: 62 FGLPANLAMATLDRPDKARRATLKRALGAVALVPAV--WLLGRQLPLEVWRADLQTAVGE 119 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 R L DGS L LNT SA +V D R + L GEIA+ A P + G++ Sbjct: 120 HKRLSLADGSTLQLNTDSAVNV--DMGARRITLVRGEIALKVPGSA---PLTIHGPYGRI 174 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 +E VR D+ ++ V V++ P +NA + + S G V D Sbjct: 175 VVGRSEVCVRLNDSDCRVSVVSGTVQLYPLRGPVVA--LNAQQQVSLKQSGVGPVSAFDA 232 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 W D+L+ ++ LG+ + L RYR G+LR +PA+ LR++G+F L NTD +L+++A Sbjct: 233 LLPGWRDDVLTAQNQSLGDFLRELGRYRPGLLRWEPALENLRVTGSFRLDNTDRVLSLLA 292 Query: 298 QTLPVKIQSITRYWINISP 316 +LPV +Q TRYW+ + P Sbjct: 293 ASLPVDVQMRTRYWVTLVP 311 >UniRef50_A1BCE6 Putative FecR n=2 Tax=Proteobacteria RepID=A1BCE6_PARDP Length = 318 Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 110/321 (34%), Positives = 161/321 (50%), Gaps = 23/321 (7%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP---G 65 R + L A+ W + A +++W Q + AWQ+ + + VP G Sbjct: 6 RAELLEEAADWAMAMRYGAPGEVDGAAFERWLAQSPQHAAAWQRAQAVFQTFERVPRGLG 65 Query: 66 DVASRALHDTRLTRRH--VMKGLLLLLGAG-----GGWQLWQSETGEGLRADYRTAKGTV 118 RA+ RR V+ G LL+ AG WQ W AD TA G Sbjct: 66 KDVLRAMEPLPGRRRALGVLGGALLVPSAGVMAWQQPWQKWG--------ADVATAVGER 117 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQ 176 L D S L LNT SAAD+ F +R + L GEI +TT D + RP V T G+ Sbjct: 118 RALALPDASQLVLNTDSAADIAFTTAERRIHLRAGEILLTTHPDPAPVPRPLLVETAFGE 177 Query: 177 LTALGTEFTVRQQD-NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 + ALGT F+VRQ D + ++ V +HAVE+ +A +++ GE F ++ + Sbjct: 178 VRALGTRFSVRQLDGDLVRVSVFRHAVEIRPRNA--APHVLHQGEQADFDSNGVRPPATV 235 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 D+ + W + +L D LG+VIA + R+R GVLRCDPAVA + +SG L +TD L + Sbjct: 236 DESAAIWEQGMLLAQDMRLGDVIAEMARHRRGVLRCDPAVAAILVSGAISLSDTDGGLAL 295 Query: 296 IAQTLPVKIQSITRYWINISP 316 + +TLPV+IQ T +W+ ++P Sbjct: 296 LERTLPVRIQRRTPWWVVVAP 316 >UniRef50_A6T3S7 Fe2+-dicitrate sensor, membrane component n=4 Tax=cellular organisms RepID=A6T3S7_JANMA Length = 330 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 108/313 (34%), Positives = 165/313 (52%), Gaps = 17/313 (5%) Query: 13 LRSASHWYAVLS-GERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA--- 68 L A+ W LS G R + ++W + ++ AW + + L N+LG +P +A Sbjct: 21 LDEAAEWLMQLSAGARAEDHRAC--ERWSQSSPEHARAWARAQLLLNKLGALPPSLAMPT 78 Query: 69 -SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 +RA R R + + +L A W +W + ADY TA G L D + Sbjct: 79 LNRAPDAGR--RAALTRLAAILALAPASWGIWSVFQAQDWMADYCTAVGEQRVIHLADNT 136 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQLTALGTEFT 185 LTLNT +A DVRF + QR VRL GEI + TA +A + RPF V T QG++ ALGT F+ Sbjct: 137 ELTLNTATAVDVRFSSTQRNVRLRSGEILVQTAHEAAAVYRPFSVNTIQGRMEALGTRFS 196 Query: 186 VRQQDNFTQLDVQQHAVEVLL-ASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 VR + T L V + AV + + ++++ AG+ + F+ + V DD +W + Sbjct: 197 VRMDGDTTHLAVLEGAVRITPDRTGTGAQQVLRAGQQVSFTDNVIADVAGADDAVIAWAR 256 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 +L L + A L+RYR+G++R DPAVAG+R+SG +P+ +TD L ++ T PV Sbjct: 257 GMLVADKMRLADFAAELSRYRSGIVRVDPAVAGVRVSGAYPVGDTDKALAMLVSTYPV-- 314 Query: 305 QSITRY---WINI 314 ++TR WI + Sbjct: 315 DAVTRMRGRWITL 327 >UniRef50_Q4ZM65 FecR protein n=23 Tax=Pseudomonas RepID=Q4ZM65_PSEU2 Length = 327 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/297 (34%), Positives = 152/297 (51%), Gaps = 20/297 (6%) Query: 32 QEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLG 91 +A +W D+++ AW Q+ + NQ +P A +AL + RH ++ L Sbjct: 27 NDAELARWLAADEEHARAWSQL-GMVNQRFALPAGPARKALQQSPGALRHRLRKL----- 80 Query: 92 AGGGWQLWQSETGEGL------------RADYRTAKGTVSRQQLEDGSLLTLNTQSAADV 139 GGG G L AD RTA G +L D +L+ LNT SA DV Sbjct: 81 -GGGLAGVFMALGLALFVGDRYLPIDYWLADQRTATGEQRDVRLADNTLIRLNTHSAIDV 139 Query: 140 RFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQ 199 RFDA QR V L GEI + T RPF V T G++ ALGT F VR++ + T L V Q Sbjct: 140 RFDAQQRRVILQDGEILVQTGDHDDPRPFIVETADGKMRALGTRFLVRRESDGTLLSVLQ 199 Query: 200 HAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIA 259 AV +A ++ ++ G+ + + + G + + +WT+ +L + L +++A Sbjct: 200 SAVVAHPRNASGEQ-VLREGQQVLLTRNGLGPLLGMPSGVDAWTRGMLVVDNARLADMLA 258 Query: 260 TLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 L RYR G L DP VA LR++GTFPL +TD L + TLPV+I+ T +W+++ P Sbjct: 259 ELGRYRTGHLGVDPKVADLRVTGTFPLTDTDLALKALLPTLPVQIEQNTAWWVSVLP 315 >UniRef50_UPI00016A4649 FecR family protein n=2 Tax=Burkholderia RepID=UPI00016A4649 Length = 221 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 4/212 (1%) Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ- 165 L AD RTA G L DG+ + LNT +A DVRFD R VRL GEI +T+ DA + Sbjct: 5 LGADVRTAVGERRAITLADGTTVILNTDTAIDVRFDDTTRRVRLRRGEIMVTSGHDAARA 64 Query: 166 --RPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 RP + T G + +GT F+VR++ + T++DV AV + A +V AG Sbjct: 65 AARPLVIATAHGDVRPVGTRFSVRERGDATRVDVFDGAVRITPLRATGVAPLVAAGRRAD 124 Query: 224 FSASEF-GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSG 282 F+ G + ++ + +W IL S+ L +++A + RYR G +RCD VA LR+SG Sbjct: 125 FTRDALAGPPRAIEGGAGAWADGILVASNLRLADLLAEVDRYRPGRVRCDATVANLRVSG 184 Query: 283 TFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 T+PL +TD IL+ + +TLPV ++ +TRYW+ + Sbjct: 185 TYPLDDTDRILDTLRETLPVDVEYVTRYWVTV 216 >UniRef50_Q4KKG0 Sigma factor regulatory protein, FecR/PupR family n=11 Tax=Pseudomonas RepID=Q4KKG0_PSEF5 Length = 334 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 110/342 (32%), Positives = 163/342 (47%), Gaps = 44/342 (12%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG- 61 PL + ++ A +W L +P+ + + W Q+++ AWQ+V++L+ +L Sbjct: 9 PLKPNPDHLVVKQAINWLLRLRNNGANPKLQQQCDLWRAAHQEHELAWQRVQSLQQELTD 68 Query: 62 ---GVPGDVASRALH-----DTRLTRRH----------------VMKGLLLLLGAGGGWQ 97 VPG A ALH RL RR V K LL GWQ Sbjct: 69 NLRSVPG--AQVALHTLEHSSQRLGRRQALKLLSGALLLGSSAWVGKDLL-------GWQ 119 Query: 98 LWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAI 157 W AD+ TA G QL DG+ L LNT SAAD+ F+A QR ++L GEI + Sbjct: 120 QWN--------ADFATAVGEQRGFQLPDGTRLELNTDSAADLNFNAEQRLIKLRRGEIMV 171 Query: 158 TTAKD-ALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA-SAPAQKRI 215 + D RP V +R L F VR +D T+L V +V + +A + Sbjct: 172 SCGADHGPARPLLVESRHALLEGFDARFVVRVEDRCTRLSVTHGSVAIHAPHTADGRSAR 231 Query: 216 VNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV 275 V AG+S Q S PL + +W ++ + L + + + RYR+G L C AV Sbjct: 232 VEAGQSYQISHGLAEPAAPLAMDVGAWADGLIVTRNMRLDDFLQEVGRYRHGYLGCSAAV 291 Query: 276 AGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISPL 317 LRLSG F L++TD +L ++ QTLPV+++ TR+W+ + P+ Sbjct: 292 GNLRLSGVFRLEDTDKLLAILPQTLPVQLRYRTRWWVTLGPV 333 >UniRef50_Q887T2 Regulatory protein, putative n=4 Tax=Pseudomonas RepID=Q887T2_PSESM Length = 320 Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 112/325 (34%), Positives = 166/325 (51%), Gaps = 21/325 (6%) Query: 5 LTDSRRQALR---SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL---RN 58 ++D R + R A+ W A+L E VS +++W + D +Q A ++++L + Sbjct: 1 MSDQREPSERMITEAASWLALLQDEPVSAADRHAFERWRKADPGHQLALSRMQSLWGSFD 60 Query: 59 QLGGVPGDVASR---ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 +L P +A R A ++ T R V + L L+ GW E AD T Sbjct: 61 ELSDTPARIALRQTFAPAGSKPTSRTV-QALALVGVLVCGWM--SVERLPVWMADRHTDV 117 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G S L DGS + LN+ SA DV+FD QR + L GE+ + AKD +QRPF V T QG Sbjct: 118 GERSEFSLADGSQVQLNSGSALDVKFDGRQRVIELLQGELWVEVAKD-VQRPFVVRTDQG 176 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 +TALGT F VR+ + T + V + A+ A+ ++N Q + P Sbjct: 177 TITALGTRFVVRRGEEGTTVSVLESAI----AAQANTADVINVATGQQALLKDGRVQTPH 232 Query: 236 ---DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDP-AVAGLRLSGTFPLKNTDA 291 D+ WT+ +L D+PL EV+ TL YR+G+LR D A+AGLR+SG F L +TDA Sbjct: 233 ALGSDDPADWTRGVLKVDDQPLSEVLQTLATYRHGLLRYDTQALAGLRVSGVFRLDDTDA 292 Query: 292 ILNVIAQTLPVKIQSITRYWINISP 316 L +A LP+K++ T + + P Sbjct: 293 ALATLADNLPIKVERFTDLLVIVKP 317 >UniRef50_B7X231 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X231_COMTE Length = 326 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 165/318 (51%), Gaps = 16/318 (5%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG---VPGDV 67 + ++ A W L G S + W E ++ AW++++ ++++ VP + Sbjct: 11 EVVQKAIAWLVRLQGGSASAAVWDECRLWREAAPEHALAWERLQGIQSRFAAMPAVPAAL 70 Query: 68 ASRALH--DTRLTRRHVMKGLLLLLGAGGGWQL----WQSETGEGLRADYRTAKGTVSRQ 121 A + L+ + RR M + + +G G + W+ L AD RT G V R Sbjct: 71 AQQTLNGASKHMGRRKAMGLMAIAMGTGCSVLIANRHWRDSA---LLADLRTGVGEVRRM 127 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA---LQRPFRVLTRQGQLT 178 L DGS++ ++T +A ++RFD +R + L G IA+T+ D+ RP V T GQ+ Sbjct: 128 VLADGSVMLMDTSTAVNLRFDEGERRLVLIKGRIALTSGSDSEAQRYRPLFVQTPHGQVR 187 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 ALGT F + +++ TQ+ V AVE L A +Q +++ GE F AS +K D + Sbjct: 188 ALGTRFQTQVREDGTQVQVLSDAVE-LRPQATSQVQLLRQGEQAWFDASGVHELKAGDGD 246 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 +WT +L PL ++A L RYR G L CD VA L +SG F L++T+ L+++ + Sbjct: 247 GDAWTDGLLVARSMPLSVLVAQLGRYRAGYLACDERVAQLPISGVFSLRDTERSLDLLQK 306 Query: 299 TLPVKIQSITRYWINISP 316 T P++++ TRYW+ + P Sbjct: 307 TWPLELRRRTRYWVTLVP 324 >UniRef50_C6D936 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacterium RepID=C6D936_PECCP Length = 315 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 107/316 (33%), Positives = 156/316 (49%), Gaps = 21/316 (6%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 + L +A+ WYA L E S WQ+W QD +Q AWQQVE + + V +AS Sbjct: 11 KDVLYAAAEWYATLYDEDCSEHDRQAWQRWLRQDDTHQLAWQQVEQIHARFHAVDSQLAS 70 Query: 70 RALHDTRLTRRHVMKGLLLL-LGAGGGWQL-WQSETGEGLRADYRTAKGTVSRQQLEDGS 127 L RR ++K L ++ L G G+ L W+S ADYRT G +E G Sbjct: 71 SVLSKRGEERRRMLKLLAIVSLTGGAGFSLPWESYA-----ADYRTGTGETRELSIETGM 125 Query: 128 LLTLNTQSAADVRFD---AHQRTVRLWYGEIAIT--TAKDALQRPFRVLTRQGQLTALG- 181 L LNT SA + + + T +L GE+ + TA A R+ T G L A Sbjct: 126 TLWLNTDSALNQQGSPALSQPLTFQLIKGELMLDNQTAHAA-----RLTTPHGDLAASAH 180 Query: 182 -TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 ++ +R + L V + EVLL +A R V AG+ + F+ + P+++ Sbjct: 181 TSQLALRYTSAHSVLSV--FSGEVLLQTAVPAARRVTAGQQVIFTRDKSSEPTPVENFRQ 238 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 SW K L + PLG+ I ++RY +G D AV LR+SG FPL TD +L+ +A+TL Sbjct: 239 SWRKGQLVADNMPLGQFINEVSRYHSGYFHVDSAVTTLRISGVFPLHETDRLLDAVARTL 298 Query: 301 PVKIQSITRYWINISP 316 PVK+ +W++I P Sbjct: 299 PVKVSRRFSWWVDIQP 314 >UniRef50_Q2KXL7 Regulator of iron dicitrate transport (Fragment) n=3 Tax=Betaproteobacteria RepID=Q2KXL7_BORA1 Length = 318 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 160/311 (51%), Gaps = 18/311 (5%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDT 75 A W L+ P A +++W D++ AW +V+ + +P +A L T Sbjct: 15 AIAWSVKLNFSSPDPGTCAAFERWRRAAPDHEQAWTRVQTVNADFSALPQGLALDTLTAT 74 Query: 76 RLTRRH-VMKGLLLLLG-AGGGWQL-----WQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 RR V+K L L G A GW + WQ+ AD T G R L DG+L Sbjct: 75 TRRRRRAVLKSLAALGGLASTGWVIREHAPWQA-------ADVSTGVGQRDRLTLADGTL 127 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA---LQRPFRVLTRQGQLTALGTEFT 185 L LNT SA +R + +R + L+ GEI+I T DA ++RPF V T G ALGT F Sbjct: 128 LMLNTDSAVGLRMEGAERVLVLYRGEISIQTGADAASPVKRPFFVRTPFGTAQALGTRFV 187 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VR + + ++ VQ+ AV + AS A + I AG++ + + ++ S +W Sbjct: 188 VRLAEAYARISVQEDAVALRPASG-ADRMIAQAGQTWRLDSQRALPMQTPAITSDAWLAG 246 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 + D LG+++A L RYR G + C P VA L++SGT+ + ++D L +A+TLP++++ Sbjct: 247 AIEGQDMRLGDLLAELARYRPGRISCAPEVADLKVSGTYHVDDSDRTLAFLARTLPIRLR 306 Query: 306 SITRYWINISP 316 TRYW+ + P Sbjct: 307 YWTRYWVAVGP 317 >UniRef50_B0KLJ0 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonadaceae RepID=B0KLJ0_PSEPG Length = 324 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 105/284 (36%), Positives = 149/284 (52%), Gaps = 19/284 (6%) Query: 39 WYEQDQDNQWAWQQVEN-LRNQLGGV-------PGDVAS--RALHDTRLTRRHVMKGL-- 86 W +QD +Q AW ++E L + L + PG A R L +RR V+ + Sbjct: 36 WLQQDPAHQQAWNRLEQRLGHPLAALHALDQRAPGQAAEARRLLMQPTRSRRDVLGAMAS 95 Query: 87 LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQR 146 L LLG W W+S+T +G AD T +G L DGS L+LN+ SA DV+FDA QR Sbjct: 96 LGLLGTAL-WGGWRSDTAQGWLADLHTGRGERRSFTLADGSRLSLNSASAVDVQFDAGQR 154 Query: 147 TVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL 206 V L +GE+ I A+D L RP RV T QGQ+ ALGT F V Q+++ T++ V QH+V L Sbjct: 155 LVVLRHGELLIQVARDPL-RPLRVRTAQGQVQALGTRFLVSQEEDATRVVVLQHSVRASL 213 Query: 207 ASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRN 266 A Q + G++ ++ + + +W + L D+PL EV+ L Y+ Sbjct: 214 AD--GQWAELQQGQAALLRSNTLERLTGEQQQRAAWLEGRLEVLDQPLHEVVDALRPYQR 271 Query: 267 GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 G +R PA GLR+ G FPL L +A+ LP+ S+ RY Sbjct: 272 GYIRLAPAARGLRVQGVFPLDQPQQALKALAEALPI---SVERY 312 >UniRef50_A6W1Y1 Anti-FecI sigma factor, FecR n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W1Y1_MARMS Length = 328 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 107/318 (33%), Positives = 160/318 (50%), Gaps = 18/318 (5%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD----VA 68 L +A+ W+AVL+ + VS + WQQW +D+ ++ AWQQVE++ D A Sbjct: 12 LEAAAEWFAVLADKPVSEASQLAWQQWLNEDEAHRKAWQQVESVGAMFSSFQDDKSQQSA 71 Query: 69 SRALHDTRL-TRRHVMKGLLLLLG-AGGGWQLWQSET-----GEGLRADYRTAKGTVSRQ 121 S L +T L RR +MKG+L + G A GW W SET AD+ T G VS Sbjct: 72 SYVLDNTSLINRRQLMKGVLGVTGVAALGWIGW-SETSLPRIASAWMADFHTQVGQVSAY 130 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRT-VRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 LEDG+ + LNT SA + R + H + L GEI + T + R F V G + + Sbjct: 131 DLEDGTKIWLNTNSAMN-RSNGHDYPGLSLVTGEILVQTKASSDSRAFSVSCAHGVIRSG 189 Query: 181 --GTEFTVRQ-QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 T F VRQ D T L V + AV + L + K + G+ + F+A +P Sbjct: 190 VDKTRFCVRQLSDKQTVLAVYEGAVSLALLDSQLSKTLY-VGQEVVFNAQSISDTRPASL 248 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 SW +L D PL +A + RY DP++A LR+ GTFP + D +L++++ Sbjct: 249 LYESWRNGLLIVEDMPLANFMAEIGRYHYVHFNLDPSLADLRVVGTFPTHDMDLVLSMLS 308 Query: 298 QTLPVKIQSITRYWINIS 315 ++ P++I+ +W+ IS Sbjct: 309 KSFPIRIKHPLPWWVGIS 326 >UniRef50_C6X944 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X944_METSD Length = 330 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 111/204 (54%), Gaps = 1/204 (0%) Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 AD RT+ G + + L DGS +TLNT SA D+RFDAH RT+RL GE+ A D QRPF Sbjct: 116 ADERTSTGEIRQISLSDGSRITLNTHSAVDIRFDAHTRTIRLTEGEVLAEVAHDPQQRPF 175 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 V R G TALGT + VRQ + + + V + V V + A V AGE L+F A + Sbjct: 176 IVENRDGTATALGTRYLVRQDADSSTVTVLESTVAVKPRHS-ATISKVYAGEQLRFDAQQ 234 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN 288 + P + SW L F D PL VIA L YR G+L+ R +G P + Sbjct: 235 AYTLMPAPALADSWHMQRLVFEDAPLSAVIARLAEYRPGLLKLRTNTQAFRFTGVLPTDD 294 Query: 289 TDAILNVIAQTLPVKIQSITRYWI 312 +D L+++ Q LP++IQ + Y + Sbjct: 295 SDKALSILQQALPIRIQRFSNYIV 318 >UniRef50_A6SZL9 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZL9_JANMA Length = 340 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 11/307 (3%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDT 75 A+ WYA L + A +++W +QD + A+ ++E L + V A AL+ Sbjct: 33 AAEWYAQLHSGDSGAAELAEFERWRQQDPGHAEAYARMEKLWARFDTVSSKPAVLALNKA 92 Query: 76 RLT-----RRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 + ++ + LLL + W QS G+ + ADYRTA G +L D S +T Sbjct: 93 LKSGAGKRKKLTAQVLLLCIAVFAAWFASQSMFGKYMLADYRTAIGEQRVIELSDQSRIT 152 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD 190 LNTQSA D+ F QR V L GEI I AKD+ RPF V T G ALGT++ V+++ Sbjct: 153 LNTQSAIDIDFSGRQRRVTLQRGEIMIDVAKDS-TRPFIVETAHGTARALGTQYIVKREA 211 Query: 191 NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE-STSWTKDILSF 249 + T++ V + +V+ A A + GE + V ++ + + +W+K +L Sbjct: 212 DATRVTVLESSVQACAAKVEACVTL-TPGEQTTITPDAVQPVSVVNAQAAAAWSKHMLVV 270 Query: 250 SDKPLGEVIATLTRYRNG--VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 D+PL +V+ L RYR G V D +AGLR+SG + L +TD L V+ T P++I+ Sbjct: 271 DDQPLAQVLTELARYRYGRIVFNADE-IAGLRVSGVYALDDTDRTLEVLLATTPIRIKRY 329 Query: 308 TRYWINI 314 T I + Sbjct: 330 TPLLIVV 336 >UniRef50_A9BW91 Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BW91_DELAS Length = 336 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 105/320 (32%), Positives = 164/320 (51%), Gaps = 15/320 (4%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 SR AL++A W+ +L S ++ W + ++ AW + + + G +P + Sbjct: 13 SREIALQAA-EWFVLLHSGEASEADHRAFEAWRARADVHEQAWLRALAVSQRAGSLPPTL 71 Query: 68 ASRALHDTR-----LTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQ 121 + AL + + RR ++ L LL+ A GW W++ + + TA G Sbjct: 72 GAPALARKQRRLGAVGRRDTVRALALLITAAPVGWLAWRAAPWMQWTSTHATATGERREW 131 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTA 179 L DGS + L+T SA DV FD R V L G + I TA D + RPF V T QG++ A Sbjct: 132 TLADGSRIVLDTGSAVDVLFDEALRRVHLSEGAVFIETAPDPQSRHRPFVVTTGQGRVRA 191 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F VR +++ V Q AV++ + + + AG+ L F A G +P D + Sbjct: 192 LGTRFVVRSVRERSEVAVLQGAVQI--TTRGGAAQQLQAGQQLWFDAMGMGRAEPADAGA 249 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN----TDAILNV 295 W + +LS + L + +A L+RYR+G L CDP+VA LR++G F L + TDA+L Sbjct: 250 AQWARGLLSADNMRLADFVAELSRYRSGWLHCDPSVADLRVTGAFQLGDADTGTDAVLAN 309 Query: 296 IAQTLPVKIQSITRYWINIS 315 + LPV++ TRYW+ ++ Sbjct: 310 LVHLLPVQVHYRTRYWVTVA 329 >UniRef50_A6SZL6 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZL6_JANMA Length = 299 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 148/292 (50%), Gaps = 19/292 (6%) Query: 36 WQQWYEQDQDNQWAWQQVENLRNQLGGV--------PGDV--ASRALHDTRLTRRHVMKG 85 ++QW D ++ AW +V L N+ V PG V A RAL +TR RR +++G Sbjct: 9 FEQWRAADPSHELAWNRVAGLLNESLSVVRDAGLRAPGQVQAAQRALLNTR--RRKLLRG 66 Query: 86 LLLLLGAGGGWQLW---QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFD 142 L+ G G L Q G+ L AD +T G L DGS + LN +SA D+ F+ Sbjct: 67 ALVFAGVGTTSVLLAERQIAVGQ-LWADLQTGTGQRQTFALADGSSVQLNARSAVDIDFN 125 Query: 143 AHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAV 202 +R +RL GE+ + A DA RPF V T G + ALGT F V QQD +Q+ V +H+V Sbjct: 126 QDRRQLRLRAGELIASVAPDA-GRPFLVQTTHGIIRALGTRFLVSQQDRQSQVVVLEHSV 184 Query: 203 EVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLT 262 E L + Q + GE F S+ + +W+ +L+ + L EV+A L Sbjct: 185 E--LRTRDGQHMRLREGEGATFDHSQIERIAGNASAHAAWSDGMLAVENATLAEVVAALK 242 Query: 263 RYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 Y +G +R P A LR G FPL++ +L +A TLP+K+ + I+I Sbjct: 243 PYYSGYIRLSPEAASLRTFGVFPLEDPGHVLRTLAHTLPLKMHHYGNWLISI 294 >UniRef50_B7X445 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X445_COMTE Length = 324 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 157/319 (49%), Gaps = 18/319 (5%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVEN--------L 56 ++ S A +A W L ++S +Q ++QW E ++ AWQQ++ L Sbjct: 1 MSPSLNPATEAAIEWLVCLHSGQMSQEQRRGFEQWLEAAPAHRAAWQQLQAPLQTLLQPL 60 Query: 57 RN----QLGGVPGDVASRALHDTRLTRRHVMKGLLLLLG--AGGGWQLWQSETGEGLRAD 110 R+ +G + G +RA TR RR +++G L L G AG GW L + A Sbjct: 61 RSSGPEHVGQLLGQTLARAEAGTR-RRRQILRGALALGGISAGCGWLLDRQTPLAQWSAS 119 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP-FR 169 RT G L DGS +TL+ +SAAD+ FDA QR V L G + A P F Sbjct: 120 LRTDTGQRREFTLPDGSTVTLDARSAADLAFDAGQRRVILRLGALVARAAPQTPGGPAFV 179 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V T GQ+ ALGT F+VR F+ + + +H+V + A Q ++ G S +F Sbjct: 180 VQTMHGQIRALGTRFSVRLNPQFSSVGMLEHSVRITTAGGAQQ--VLAEGHSARFDTQGI 237 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 A +W + +L D PLGEV+ L YR G +R A L++ GT+ L++T Sbjct: 238 WADASAPSSMAAWQQGMLEAHDLPLGEVVQALRAYRRGWIRVSAHAAALQVYGTYSLEDT 297 Query: 290 DAILNVIAQTLPVKIQSIT 308 D L +A+TLP++++S + Sbjct: 298 DRALAALAETLPIRLRSYS 316 >UniRef50_A9IDD5 Transmembrane sensor n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IDD5_BORPD Length = 331 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 104/317 (32%), Positives = 162/317 (51%), Gaps = 17/317 (5%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV------PGD 66 + A+ WYA+L S +ARWQ W ++ AWQ VE++ ++ P Sbjct: 9 MEHAAQWYALLISGEASAADQARWQAWLAAHPHHRQAWQYVESVSQRVLAPLQDTPDPRQ 68 Query: 67 VASR--ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG-----EGLRADYRTAKGTVS 119 +A++ A+H+ RR V+ G+ + GA + ++ ADYRT G + Sbjct: 69 MAAKVYAVHERARMRRRVLAGIGTIAGAAALGWAARPDSPMAGAIAAWTADYRTGAGDIR 128 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK-DALQRPFRVLTRQGQLT 178 + L DGS + LNT SA D R + L GEI ++TA+ DA RPF V T QG++ Sbjct: 129 QFTLADGSQVWLNTASALDADMRGGLRRLTLAAGEILVSTARGDA--RPFVVDTAQGRMR 186 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 ALGT FTVR++ T L V AVE+ A A A + ++ AG +F+A A P D Sbjct: 187 ALGTRFTVRREQGHTFLAVFDGAVEIRTARAGAVQ-VIPAGWQTRFAAGTIEASVPADLA 245 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 +W++ L + L +V+ L RY + P VA R+ GTFPL++ D L +++Q Sbjct: 246 REAWSRGELVAWNLSLADVVDELGRYHPAHISLAPNVAQRRVFGTFPLRDMDGALAMLSQ 305 Query: 299 TLPVKIQSITRYWINIS 315 ++++ +WI+I+ Sbjct: 306 AAALRVRRPWPWWISIT 322 >UniRef50_Q82WX3 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82WX3_NITEU Length = 308 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 150/308 (48%), Gaps = 26/308 (8%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDT 75 A+ W LS ++S Q+A ++ W QD ++ A++Q+ L + Sbjct: 16 AAEWVVRLSDSQISTAQQADFEAWLAQDIRHREAYEQISRLWQSVT-------------P 62 Query: 76 RLTRRHVMKGLL--LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 + R+H GLL ++L G + L S AD RTA G + + L DGS +TL++ Sbjct: 63 QRRRKHRPAGLLASIVLVLIGIYCLPLST----WLADERTATGEIRQVALPDGSTITLDS 118 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQ-----RPFRVLTRQGQLTALGTEFTVRQ 188 SAADV FD H R + L G I DA + RPF + R G ALGT + V Q Sbjct: 119 DSAADVVFDTHARRIILHRGRIFAAVVPDAAEQGAHHRPFIIENRDGTAQALGTRYIVEQ 178 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 + +++ V + +V V P Q V +G+S++F + + +P+ + SW + L Sbjct: 179 TGDHSRVSVVESSVNVTSRDRPDQSITVYSGQSIRFDSEQIHGQEPIPPAAASWVQSRLV 238 Query: 249 FSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 + + PL +VI L RYR G LR A A LR +G P + D L ++ LP+ I T Sbjct: 239 YRNAPLSQVIDDLARYRTGFLRISGAAAQLRFTGVLPADDPDTALKILQHALPIGIDRYT 298 Query: 309 R--YWINI 314 R WIN+ Sbjct: 299 RVLIWINL 306 >UniRef50_C6XBM0 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBM0_METSD Length = 327 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 87/227 (38%), Positives = 125/227 (55%), Gaps = 5/227 (2%) Query: 79 RRHVMKGL-LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAA 137 RR ++ G+ L+L+G G + L +S TG L AD T+ L DGS LTL+ +SA Sbjct: 92 RRRLLNGMALVLVGLGTAYLLKRSPTGMALTADIATSTAERKTVILADGSQLTLDAESAI 151 Query: 138 DVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDV 197 D+ F A +R + L G + A D L RPF V T G +TALGT F VR+Q + + V Sbjct: 152 DIHFSAGKRWLTLHAGACIVQVAAD-LARPFTVATPHGSVTALGTRFMVRRQPDRSLAVV 210 Query: 198 QQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEV 257 QH+V LLA+ P Q+ +++ GES F ++ A + +W +L ++ LGEV Sbjct: 211 LQHSV--LLAAGPHQQ-VLSEGESAWFDSNGIAAAREDMRSYAAWEDGVLDVRNQSLGEV 267 Query: 258 IATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 + L YR LR PA + LR+ G F L + + L +AQ LPV+I Sbjct: 268 VDALRAYRKDYLRVSPAASKLRVFGVFQLDDPERSLRTLAQALPVRI 314 >UniRef50_C6X948 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X948_METSD Length = 348 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 152/319 (47%), Gaps = 16/319 (5%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 ++R +R A+ W +L+ S EA + W + D ++ A + +L V D Sbjct: 13 ETRSAVVRQAAEWLVLLASPEASAADEAAFNAWVQADPAHRNAVVTMRGFVGKLSAVASD 72 Query: 67 VASRA-----LHDTRLTR--RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 + RA LH R R+ + +LLL G WQL + + AD T Sbjct: 73 TSQRAVLQQALHKPASGRGWRNAVAAMLLLGAMLGSWQLLNPWSA--MFADLSTETAEWK 130 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 + L D S L L + +A D+ F AH+R + L GEI + A D +RPF V T G + A Sbjct: 131 NEVLPDQSHLALASATAVDINFSAHERKLALLKGEILVDVAPDP-ERPFIVQTPHGTMRA 189 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F V D+ T L + VE A Q RIV+AGE + SA +D ES Sbjct: 190 LGTRFVVTLTDSGTTLTMLHSKVEA-KTEAQDQTRIVSAGEQVVLSAEHISTPVAIDTES 248 Query: 240 T--SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLRLSGTFPLKNTDAILNVI 296 +W+ L D+P+ +V+ L RYR G++ A + + +S PL +TD L ++ Sbjct: 249 VAAAWSAHQLMVQDQPMDQVLDKLWRYRRGIVMYRTADMEAMHVSALLPLDDTDRALQLL 308 Query: 297 AQTLPVKIQSITRY--WIN 313 A + P++I+ +T + W+ Sbjct: 309 ASSFPLRIRHLTPWLSWVE 327 >UniRef50_Q13G72 Putative FecR n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13G72_BURXL Length = 318 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 148/318 (46%), Gaps = 25/318 (7%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVE---NLRNQLGGVPGDVA 68 AL +A W L+ S + + W ++Q AW +E +L + G A Sbjct: 10 ALDAAIRWAVRLAAGNASEAEFREFLDWKAAAVEHQLAWGSIEQQLHLFSSARERDGGTA 69 Query: 69 SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG--EGLRADYRTAKGTVSRQQLEDG 126 RAL TR++RR +++ L + G G + L AD T G + L D Sbjct: 70 HRALAATRVSRRKLLRDALATVAVVGVVGAAVRRFGLFDSLYADVATDVGARRQLSLADN 129 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 S+L L+ +SA DV F +R +RL G + + A+D+ RPF V TR G +ALGT F V Sbjct: 130 SMLVLDARSAVDVNFGERERAIRLLEGRLFVRVARDS-ARPFVVYTRDGSFSALGTAFGV 188 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK----PL-----DD 237 ++L V AV A AG +L AS+ ++ P+ D Sbjct: 189 GLSSEGSRLAVTHSAVRARCA----------AGATLDVVASQVATLRAGAQPVVERWHAD 238 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +W K ++ D+PL EV+ +L RY G + VA L++SG FPL + + IA Sbjct: 239 SEVTWMKGYVTIVDRPLHEVVESLNRYVRGFISMSDDVAALKISGLFPLDDAQMAIRQIA 298 Query: 298 QTLPVKIQSITRYWINIS 315 QTLPV + T Y+I I+ Sbjct: 299 QTLPVIVTYHTDYFIRIT 316 >UniRef50_Q6FBE6 Membrane bound regulator in multi-component regulatory system with cytoplasmic FecI (Sigma factor) and FecA (Outer membrane receptor) n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FBE6_ACIAD Length = 313 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 84/307 (27%), Positives = 145/307 (47%), Gaps = 7/307 (2%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + R Q L A W + + ++ + ++QW + Q +Q WQQ L + +P Sbjct: 5 NERHQILEEAVEWLMQMKQKPLNEIELLEFEQWKNRSQLHQSIWQQAYQLEEKFQSLPSH 64 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 +A + + H L++L L+ + ADYR +L DG Sbjct: 65 IAIPIIQKQK---SHPDIWLMVLSCLPLLGLLYVMNQQQQWTADYRNGFHAPQTVKLPDG 121 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 + LN+ +A DV++ A +R + L GEI I T D RPF V T+QGQ ALGT++ V Sbjct: 122 GKIILNSNTAIDVKYTAKKRDIILRKGEIWIETQHDVKNRPFTVYTQQGQAQALGTKYLV 181 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 + +Q+ V + AV+V Q I+ G+ + + +V+ D WTK + Sbjct: 182 KIDQKSSQIAVLKGAVKV-QPKTNNQYVIITKGQKISINQYNLHSVEYFDHSEIGWTKGL 240 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 + ++ PL E + L Y++ ++ DP V+ +++SGTFP+ N + ++ T + Sbjct: 241 IMVNEIPLSEFVQKLRPYQSALIYLDPEVSNIKISGTFPIANMAQLYEMLENTYAI---D 297 Query: 307 ITRYWIN 313 + RY +N Sbjct: 298 VDRYAMN 304 >UniRef50_B7X004 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X004_COMTE Length = 350 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 105/318 (33%), Positives = 158/318 (49%), Gaps = 15/318 (4%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R A W+ L E S +++W W QD ++ AWQ+++ ++ +L G+ GD AL Sbjct: 31 RQAVEWWLQLQEEPDSALLQSQWHAWRAQDPLHEQAWQRIQAVQQRLQGL-GDTPLAALA 89 Query: 74 DTRLT-------RRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 + L RR V LLL+LG G WQ+ AD RTA+G R L DG Sbjct: 90 RSALVSRRGGDRRRAVQALLLLVLGGGAAWQMEAHLPWRNWVADVRTARGERRRLTLPDG 149 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEF 184 + L LN SA D+ F A +R + L G+I + TA D+ Q RP V T G++ LGT F Sbjct: 150 TRLVLNGGSALDIAFGATERRLLLRAGDIHVVTAADSQQPARPLVVQTEAGEMWPLGTRF 209 Query: 185 TVRQQDNFTQL-DVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 TV + L V + AV + P Q+R++ AG+ A P +E ++W Sbjct: 210 TVNVAEGQRSLVAVYEGAVRLRPRLQPQQERVLPAGQQAWLDMQGVAAAVPAYEEQSAWI 269 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 +L + L V+ L L C PAVAGL++SGT+PL + I+ + L ++ Sbjct: 270 DGMLVARNMRLDAVLQALQPATTVSLVCHPAVAGLKVSGTYPLDDVPRIMATLGTLLQLQ 329 Query: 304 IQSITRYW----INISPL 317 ++S+ R+W + I P+ Sbjct: 330 VRSMRRWWGGQELAIGPM 347 >UniRef50_Q4KDP8 Sigma factor regulatory protein PupR n=2 Tax=Pseudomonas RepID=Q4KDP8_PSEF5 Length = 344 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 151/306 (49%), Gaps = 6/306 (1%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS---RAL 72 A W L +VS A W +W + ++ AWQ+ E L +L V S RA Sbjct: 35 AMQWQLDLQEPQVSAATLAAWHRWRQAHPLHEKAWQRAETLAQRLQQVRSQGHSELARAT 94 Query: 73 HDTRLTRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 L RR +K GLLL+ GAG W + + ADY T G R L D + + Sbjct: 95 LVPNLGRRRALKQLGLLLVTGAGA-WAARDTALVQDWSADYSTRVGQQRRITLADQTRVQ 153 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD 190 LNT +A +RFD QR ++L GE+ +T A+ V T +G + F+VRQ Sbjct: 154 LNTDTAIALRFDREQRRIKLLRGELLLTLARQDSLPALHVETAEGWIETSTARFSVRQLA 213 Query: 191 NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFS 250 T+L V Q + + + AGE +F+ + + +W++ +L Sbjct: 214 GRTELSVYQGNLTLRPRDGGQPALSLGAGEQARFNRQGLLLRQAQNATQPAWSQGMLVAQ 273 Query: 251 DKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 + L + + L RYR+G L CDP++A L++SGTFPL +TD +L +A+TL ++++ TRY Sbjct: 274 GQALAQFLEELGRYRHGHLGCDPSLAQLKVSGTFPLADTDRVLFAVARTLQLEVRQFTRY 333 Query: 311 WINISP 316 W+ + P Sbjct: 334 WVTLKP 339 >UniRef50_Q4KAZ6 Sigma factor regulatory protein, putative n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KAZ6_PSEF5 Length = 315 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 25/320 (7%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQV----ENLRNQLGGVPG 65 +Q L A W +L P+Q+A W D ++ AWQ++ ++LR+ +P Sbjct: 3 QQVLDQALEWLVLLQSGISPPEQQAACLAWRRADPQHELAWQRLAGIGQDLRDSTRSLPA 62 Query: 66 DVASRALHD-TRLTRRHVMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 A + L + RR ++KG++ L + A W + + L +DY TA G + QL Sbjct: 63 PHARQLLQARSHPGRRTLLKGIVGLGVVAASSWSVRERLLLPQLFSDYHTATGERRQLQL 122 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 G+ L L+T+++ D + +RL G + +T A P +V T G + + Sbjct: 123 AAGASLQLDTRTSLDQKASPQGLQLRLNSGRLLLTLGNAA---PVQVTTTDGHI-----Q 174 Query: 184 FTVRQQ---------DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 R Q N T++ + + V A APA ++ G+ + + A+ Sbjct: 175 LAPRSQLILSVGLPGINGTRVQLLAGSGSVSTAHAPALS--LDPGQQVDIAQQRISALAA 232 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 + + +WT+ +L +PLGEVIA L RYR G+LRC +AGLR+SG+F L DA L Sbjct: 233 VPTTANAWTQGLLIAERRPLGEVIAELDRYRPGLLRCSAEIAGLRVSGSFSLDQPDASLE 292 Query: 295 VIAQTLPVKIQSITRYWINI 314 ++A+TLP++I+ + YW ++ Sbjct: 293 LLARTLPIRIRRVMGYWASV 312 >UniRef50_B0KIR3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIR3_PSEPG Length = 323 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 150/314 (47%), Gaps = 13/314 (4%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP--GDVASR 70 L++A++WYA L Q + RWQ+W NQ AW V+ + + + D + + Sbjct: 12 LQAAANWYAQLLAAPQDLQLQLRWQKWLGTAHANQVAWDHVQRISQRFSPLKLQADASLQ 71 Query: 71 ALHDTRLT----RRHVMKGLLLLLGAG---GGWQLWQSETG-EGLRADYRTAKGTVSRQQ 122 AL R T RR V LL G+ GW+L + + L AD RT G V + Sbjct: 72 ALGSVRRTDLDRRRAVGLLGLLCGGSLLALAGWRLPAARRQLQALSADQRTGTGEVRSLR 131 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 L DG L LN+ +A ++ + A+ R + L GE+ + TA D+ RPF + TR G+L ALGT Sbjct: 132 LPDGGQLWLNSATALNIDYRANLRRLELLAGEVLVETAHDS--RPFVIDTRHGRLQALGT 189 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 F+V Q+D +L V AV + A A +V AG F + +D+ +W Sbjct: 190 RFSVWQRDQAARLSVFDGAVRLHPADG-AGSLVVAAGWQADFDRHGAQPPRAVDESRQAW 248 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 L +D L E L Y G L P V LR+ G FP + + L ++ LP+ Sbjct: 249 RDGRLLANDISLSEFSEQLRAYLPGHLGVAPQVQALRVMGNFPANDPERTLAMLESALPI 308 Query: 303 KIQSITRYWINISP 316 K++ +W +I P Sbjct: 309 KVRKTLPWWYSIEP 322 >UniRef50_C1DGX1 Anti-sigma factor, FecR-like protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGX1_AZOVD Length = 311 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 125/219 (57%), Gaps = 11/219 (5%) Query: 99 WQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAIT 158 WQ G ADYRTA G +L DGS L L ++ D+ FDA +RT+RL+ GE+ + Sbjct: 93 WQGHE-RGWMADYRTAMGEHRHLELADGSQLELAPETRLDLDFDARRRTLRLYTGELYVR 151 Query: 159 TAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI-VN 217 A D RPF V G + ALGT F VR+ + +L V +HAV V + +RI V Sbjct: 152 VASDP-ARPFLVEAADGSIRALGTGFDVRRDGSRVRLVVTEHAVRV----SRGDERIDVQ 206 Query: 218 AGESLQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAV 275 AG+SL++ A +D D +T+W + L F +PLGEV+ L+RY+ G+L D + Sbjct: 207 AGQSLEYGEHGLSAPVAVDIDSATAWRRHRLLFDGQPLGEVLDALSRYQPGLLLVRDERL 266 Query: 276 AGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 L ++G F ++ DA+L ++ ++LP++++ + W+ + Sbjct: 267 RRLPVTGLFDTRDPDALLELLERSLPIRVRRLP--WVTL 303 >UniRef50_C1DGN9 PupR/FecR-like anti-sigma factor protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGN9_AZOVD Length = 324 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 159/288 (55%), Gaps = 12/288 (4%) Query: 36 WQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMK------GLLLL 89 +Q W+E + ++ AWQ+V++L+ + GVP D+A +AL ++L + H+ + LLL Sbjct: 37 FQVWHEASEQHRQAWQRVQSLQGRFAGVPADLAMQAL--SKLPKVHLRRRQLGKLTLLLG 94 Query: 90 LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVR 149 W + + L AD+ TA G R +L DGS L LNT SA + FD+ QR +R Sbjct: 95 ALGATTWGAGEVTPWQRLLADHSTAIGERRRWRLADGSQLDLNTDSAVSLHFDSEQRLLR 154 Query: 150 LWYGEIAITTAKDALQ---RPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL 206 L GE+ + + D Q RP RV TR G L ALGT F+VR + T+L V++ AV + Sbjct: 155 LLRGELHLISGSDTGQFAERPLRVQTRDGLLEALGTRFSVRLDEQATRLAVEEGAVSLRP 214 Query: 207 ASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRN 266 A ++ RI AG+ ++ + W L + PL E++A L+R+R+ Sbjct: 215 ADG-SELRIAGAGQQWLLNSGLALRLPQSHSAPNGWLDGQLIARELPLEELLAELSRHRH 273 Query: 267 GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 G L CDPA+A +SG F L + DA L+ IA++ +++ +TRYW+ + Sbjct: 274 GYLGCDPAIARRPISGNFQLSDIDATLDFIARSHDLRLYRLTRYWVRL 321 >UniRef50_Q4KE62 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KE62_PSEF5 Length = 321 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 150/311 (48%), Gaps = 12/311 (3%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL-------RNQLGGVPGDV 67 SA W + +S QQW + ++++AWQ+V +L N L Sbjct: 13 SAIDWLVRMQSGLMSAADHQALQQWRQASVEHEYAWQRVSSLPLMLQPGANLLADATARR 72 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 A +A RR V+K LL L GG WQ S A YRT G L DG Sbjct: 73 ALQAAGADPQRRRQVLKCLLALGLLGGISWQGADSTLVRSALASYRTGVGERRHWALADG 132 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 + L LNT SA ++ A QR+++L GE+A+ T + ++ T L + G V Sbjct: 133 ASLWLNTASAVNLDLSARQRSLQLIEGELALDTPAGSAS--LQLSTPDAVLYSRGANLLV 190 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-ESTSWTKD 245 R TQ+ V + V+V PA + AG + G P+D + +W + Sbjct: 191 RHDRLGTQVTVLRGLVQVSARQHPA-PLALQAGWQTRVDGRGAGRPSPIDTFLAQAWMRG 249 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 IL L +++A L+RYR G LRC AVAGLR++G+F L +TDA L ++A TLPV+I+ Sbjct: 250 ILPAERMRLDQLLAELSRYRPGFLRCSEAVAGLRVTGSFQLDDTDAALALVANTLPVRIE 309 Query: 306 SITRYWINISP 316 TRYW+ + P Sbjct: 310 RRTRYWVTVVP 320 >UniRef50_C4SII2 Fe2+-dicitrate sensor, membrane component n=2 Tax=Yersinia RepID=C4SII2_YERMO Length = 304 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 93/283 (32%), Positives = 141/283 (49%), Gaps = 20/283 (7%) Query: 29 SPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTR---LTRRHVMKG 85 +P+ WYE Q N+ Q E + Q+ G+ H TR L RR ++ Sbjct: 22 TPEHSKLLDAWYEWCQQNE----QHEKIYQQMSGL--------WHSTRHEPLRRRPALRV 69 Query: 86 LLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQ 145 + L G L Q L AD RT G + L+DGS + LN+ SA ++ + + Q Sbjct: 70 SVWLALMVSGLLLSQLPYHYWL-ADQRTVIGEIKHIALDDGSEIILNSNSAVNIHYSSGQ 128 Query: 146 RTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL 205 R + L GE+ AKD +RPF V +R Q ALGT +TV QQ T++ V + VEV Sbjct: 129 RLIVLQRGEVYAIVAKDPAKRPFVVSSRDAQARALGTRYTVEQQPEETKVSVVESTVEVR 188 Query: 206 LASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYR 265 K + AG+ + + +F + + SW +D L F D PL +VI L+RYR Sbjct: 189 ANGNLQAKVTLAAGQQVSLNQHQFIGPVSHNRNADSWVQDQLIFEDAPLEQVIEQLSRYR 248 Query: 266 NGVLRCDP----AVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 G++ DP A++ LR +G P ++D L+++ Q+LP+K+ Sbjct: 249 PGLMYFDPRSRSALSELRFTGVLPATDSDQALSLLRQSLPLKV 291 >UniRef50_B6IXY0 Sigma factor regulatory protein, FecR n=1 Tax=Rhodospirillum centenum SW RepID=B6IXY0_RHOCS Length = 331 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 17/303 (5%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQ----------QVENLRNQLGGVPG 65 A+ W A L ER + ++ + W QD ++ A++ Q+ L Q+ V Sbjct: 17 AAQWAATLDDERATQEEHDACEAWCRQDPLHRLAFERMRRLDRRFEQLSELDRQVLRVAA 76 Query: 66 DVASRAL--HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 D R+ RR + G+ LL G G W L D RT +G +L Sbjct: 77 DRPGRSAVGRSAGAVRRGALLGICLLFGLG--WLAAGLPQVRALFPDERTERGERRDMRL 134 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS LT++T +A D+R A R + L+ G I A D +RPF V T G +TALGT Sbjct: 135 ADGSGLTIDTDTALDIRLSAGMRRIELFGGRILAEVAHDP-ERPFTVATADGTVTALGTA 193 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE-STSW 242 F+VR+ T + V V A+ A + GE Q + + P+D +T+W Sbjct: 194 FSVRRDGGRTLVTVVASRVRACPATTGAACLELGPGEQAQLAGGSATRLAPVDPAGATAW 253 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDP-AVAGLRLSGTFPLKNTDAILNVIAQTLP 301 T+ L D+PL V+ L RYR +R + + GLR++G+ PL N+ L+ +A L Sbjct: 254 TRGWLVIDDQPLTAVLEELNRYRAVPVRFEARTLQGLRVTGSLPLDNSGRALDALAGMLG 313 Query: 302 VKI 304 +++ Sbjct: 314 LRL 316 >UniRef50_B0KMC5 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KMC5_PSEPG Length = 332 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 107/316 (33%), Positives = 156/316 (49%), Gaps = 25/316 (7%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG-----GVPGDVASR 70 A W+ + +A + W + ++ AW++ L QL G P D+A R Sbjct: 22 AMEWWLDMQEANFDSSAQAAFVAWRSEHPLHELAWEKALALGEQLDSLRTRGDP-DLARR 80 Query: 71 AL---HDTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 AL +L+RR +KGL LLL A G W SE L ADY T G R L Sbjct: 81 ALLLPSQEKLSRRRAIKGLALLLAASAGAWMSRDSEMVSRLSADYTTGVGEQRRVALASD 140 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 L LNT SA + R H+ +RL GE+ I A L + T Q + A FT+ Sbjct: 141 LSLELNTHSAINARATGHRWHLRLLSGEVLIDAA---LNPALYIDTAQVRTQASSARFTI 197 Query: 187 RQQDN-FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-----EST 240 RQ DN TQL V + +++V P Q A ++ Q + FG + LD S Sbjct: 198 RQLDNGSTQLAVYRGSLQV----TPTQAGTWTALQAGQLA--RFGPLGVLDQGVMQASSP 251 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +W + ++ + +PL + L RYR+G L CD A+A LR+ GT+PL ++D +++ +AQTL Sbjct: 252 AWAEGMIVANGQPLQAFLDELGRYRHGYLGCDAALANLRVWGTYPLADSDRVIDAVAQTL 311 Query: 301 PVKIQSITRYWINISP 316 +++Q TR WIN+ P Sbjct: 312 QLEVQRFTRLWINLRP 327 >UniRef50_Q3SUQ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SUQ1_NITWN Length = 330 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 11/300 (3%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R A W+A++ ++V+ + ++ W +D+ ++ A+ +E L + +P + R Sbjct: 32 REAVAWFAIMHADQVAKSDQLAFRAWLRRDERHRVAYADIERLWSGASELPVVKSRRREK 91 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 +TRR G+L + GGGW +Q ADYRT+ G +L D S + + Sbjct: 92 RIAVTRRTFGAGMLAAMAGGGGWVAYQQHPF----ADYRTSAGERRTVRLADDSSVDMAG 147 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ-QDNF 192 +A V F + R V L GE + A D RPF V G+ A GT F V D+ Sbjct: 148 ATALSVDFSSKLRLVTLHRGEAYFSVAPDT-SRPFVVEAAAGRTMAAGTAFNVDYVSDDD 206 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST-SWTKDILSFSD 251 ++ V QHAV++ +A+ A+ ++AG L + G + +D S W L F Sbjct: 207 VRVTVAQHAVDIRVAAEGAR---LDAGSQLTYGRESIGPPQAIDPASELGWRDGRLIFIS 263 Query: 252 KPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 +P G V+A+L R+R G ++ + A+A ++ L+ + IL + TLP+++ ++T Y Sbjct: 264 QPFGRVVASLNRWRQGRLMVMESALAVRPVTLIVDLQKSGNILATLEDTLPIRVVNVTPY 323 >UniRef50_Q1IGG4 Putative FecR-like transmembrane sensor n=2 Tax=Pseudomonas RepID=Q1IGG4_PSEE4 Length = 325 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 112/205 (54%), Gaps = 5/205 (2%) Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP 167 RADY TA G QLEDGS + LNT SA V A +R VRL GE D+ RP Sbjct: 117 RADYATATGESRSIQLEDGSRIQLNTDSALQVELTAGERRVRLLRGEAWFEVTHDS-ARP 175 Query: 168 FRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS 227 F V + G + +GT+F+V + D T++ + + VEV + AP+ + G++L+++AS Sbjct: 176 FLVRSGDGWVRVVGTQFSVARDDRQTRVQLDRGKVEVRVGQAPSV--FLQPGQALEYTAS 233 Query: 228 EFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFP 285 GAV P + + +W + L FS +PL EV+ L RY G L A+ G ++SG F Sbjct: 234 GVGAVHPFEPSRAFAWRQRQLVFSQQPLAEVVEELNRYWPGQTLVLGDALRGRKVSGVFE 293 Query: 286 LKNTDAILNVIAQTLPVKIQSITRY 310 + +A+L + TL V+ + T Y Sbjct: 294 IDKPEAVLKALTHTLGVRAEQYTPY 318 >UniRef50_Q7WEI1 Heme uptake transmembrane sensor n=2 Tax=Bordetella RepID=Q7WEI1_BORBR Length = 305 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 135/305 (44%), Gaps = 11/305 (3%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R A+ W L + S + W +++ AWQ+ L + +P V AL Sbjct: 3 REAARWLVRLGSGQASADEIQACDHWRASHAEHERAWQRARRLTSMFDRIPPAVGQAALG 62 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLW-QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLN 132 R RR ++K L+ +L A + G AD RT G L G+ L LN Sbjct: 63 RAR-DRRAMLKSLVAMLAAPPAAWAALRGARNSGWLADLRTGTGETRTVALGPGTQLRLN 121 Query: 133 TQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF 192 T +A + + ++RL GEI + RP RVLTR G + +RQ D Sbjct: 122 TGTAVSLDDGSGMLSLRLHRGEIYLEA-----DRPCRVLTRGGMIRTEAAHLWLRQDDAD 176 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF-GAVKPLDDESTSWTKDILSFSD 251 L V A A + V AG+ + + GA + LD S W + +L Sbjct: 177 GLLGVV--AGLAFWQGADNRTHSVAAGQRIAWHDGALQGAAQTLDG-SPDWLRGVLRADA 233 Query: 252 KPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYW 311 L + L+RYR G LRCDP VAGLRLSG F L +TD IL + LPV++ +T YW Sbjct: 234 MRLDHFLRELSRYRPGTLRCDPRVAGLRLSGVFQLAHTDDILRALPALLPVQLSYVTPYW 293 Query: 312 INISP 316 I + P Sbjct: 294 ITVGP 298 >UniRef50_C1DGE4 Anti-sigma factor protein, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGE4_AZOVD Length = 317 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 94/307 (30%), Positives = 150/307 (48%), Gaps = 11/307 (3%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ----LGGVPGDVASR 70 +A W A+ R+S + R++ W +++ ++ AW++++ + + G P D+A + Sbjct: 12 AAIEWLALQRSGRMSDTERRRFEGWLAENERHRGAWERLQRRLDSAFAGIAGQPADLAQK 71 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG---EGLRADYRTAKGTVSRQQLEDGS 127 L +RR ++G L L G G G + G +GL AD TA G R L DGS Sbjct: 72 TLLSAGSSRRQALRGALALAGLGLGGLG-LTRPGMPLDGLVADLSTATGERRRFALADGS 130 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 + LN QS D+ +D QR + L G + DA +RPF V T G++ ALGT F++ Sbjct: 131 SVLLNAQSRVDIDYDGQQRRLYLRRGALLAEVTADA-RRPFVVETPFGRVRALGTRFSIA 189 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 + T + VQ+ +V L S ++ AGE + ++ +W L Sbjct: 190 LGERETTVWVQE--AQVRLESRSGDSLVLAAGEGARLDPDGCQRLEAQRRSEFAWQDGWL 247 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 D+PL +IA L Y G LR A LR+SG FPL +++ +L + + LP++I Sbjct: 248 ELHDRPLETLIAALRPYHRGHLRLSRDAADLRISGLFPLDDSEQVLASLEEILPLRIHRY 307 Query: 308 TRYWINI 314 +W NI Sbjct: 308 LGWWTNI 314 >UniRef50_C6DBT1 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacterium RepID=C6DBT1_PECCP Length = 322 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 90/308 (29%), Positives = 145/308 (47%), Gaps = 14/308 (4%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVE----NLRNQLGGVPGDVASRA 71 A W +L + +++W ++ ++ A Q++E + L +P + +A Sbjct: 14 AIEWMVLLRSGEATQTDYDEYRRWRYENPLHERACQRIEQTLGKFQPLLAALPHEPIRQA 73 Query: 72 LHDTRLTRRHVMKGL-LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ--LEDGSL 128 L R+ + GL ++ + + L Q L +D +TA T RQQ L DGS Sbjct: 74 LLAPSGRRKVLQYGLGMVAVASLSSLLLNQHYPLSPLLSDVKTA--TAQRQQVPLSDGST 131 Query: 129 LTLNTQSAADVRFDAHQ--RTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 L LN ++A D+ + R V + G I DA QRPF + T+ G + AL V Sbjct: 132 LMLNARTAVDINVEPKNSIRQVGVLNGGIFAKIKPDA-QRPFIIDTQMGNIVALQANVNV 190 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 R + + V + +V + Q ++AG+ + F S V + +W + Sbjct: 191 RYESGGVHVGVLDNIAKV--TNHAGQSLRLHAGQGVWFDRSTLYQVAVTPETEIAWMQGR 248 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 L D+ L VI+ L Y G++R DPA+A LR+SG FPL N + L+ +AQT+P+ I Sbjct: 249 LEVRDRSLASVISALRDYTPGIIRLDPAIADLRVSGNFPLDNLNYTLDSLAQTMPIAIVH 308 Query: 307 ITRYWINI 314 T YWI+I Sbjct: 309 TTDYWIHI 316 >UniRef50_B1J6G1 Anti-FecI sigma factor, FecR n=2 Tax=Gammaproteobacteria RepID=B1J6G1_PSEPW Length = 309 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 111/208 (53%), Gaps = 13/208 (6%) Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP 167 R+D T G + +L L LNT SA D+ H R +RL GE+ + A Sbjct: 112 RSDVTTGVGEQRQLRLNGDIQLQLNTDSAVDL----HGREIRLRSGEMLVDGAD------ 161 Query: 168 FRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS 227 +RV +QG +R++D +++L V++ EVL+ +A ++R V AG L + Sbjct: 162 WRVRCQQGVCDGHQARAVLRERDGYSELHVERG--EVLVTAAAGRQR-VQAGSGLALYPT 218 Query: 228 EFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLK 287 ++ + +W++ +L +D PL + +A RYR G LRCDPAVA LRLSG F L Sbjct: 219 RLASLDAGVLDPFAWSRGLLIVNDIPLADFLAEAARYRRGWLRCDPAVADLRLSGVFHLD 278 Query: 288 NTDAILNVIAQTLPVKIQSITRYWINIS 315 A+L+ IA LPV+I TR+W+ IS Sbjct: 279 QPGALLDNIAHLLPVRIDQRTRWWVRIS 306 >UniRef50_D0KIJ1 Anti-FecI sigma factor, FecR n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KIJ1_PECWW Length = 315 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 84/285 (29%), Positives = 132/285 (46%), Gaps = 19/285 (6%) Query: 36 WQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGG 95 WQQW D + + Q++ L P + + + R+V + + GG Sbjct: 38 WQQWCLIDARHPVVYHQMQQLWASATITPASTSPKPR-----SSRYVALAIFI----AGG 88 Query: 96 WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEI 155 W L Q L AD RT G V R L+DGS L LN+ SA ++ F + +RTV L GE+ Sbjct: 89 WLLSQLPYAYWL-ADQRTVAGEVRRIVLDDGSELVLNSNSAVNIAFTSQKRTVTLLRGEV 147 Query: 156 AITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI 215 AKD RPF + + Q ALGT ++VR T + V + V + P + Sbjct: 148 YAHVAKDPRSRPFVIDSAQATAQALGTRYSVRDAGEDTLVSVDESRVRITANKNPDIRLD 207 Query: 216 VNAGESLQFSASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDP- 273 + AG+ Q + +P+ + T W + L F + P +VI L+R+ G++ DP Sbjct: 208 LGAGQ--QIGLDQHHITRPVSASTETGWIHNQLIFENAPFIQVIDELSRHYPGLIYLDPR 265 Query: 274 ---AVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY--WIN 313 + LR +G PL N+ L ++ +LP+ ++ Y WI+ Sbjct: 266 QRQELERLRFTGVLPLNNSQQALELLQHSLPISVRQSFGYISWIS 310 >UniRef50_Q82VI9 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82VI9_NITEU Length = 343 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 80/247 (32%), Positives = 126/247 (51%), Gaps = 13/247 (5%) Query: 78 TRRHVMKGLLLLLGAGG----GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 +RR K + L+ A WQL Q L AD RT G L DG+ +TLN+ Sbjct: 89 SRRRFRKTVATLVVACALLLPAWQLLQIYPPAYLMADLRTTTGQWQTHDLPDGTRITLNS 148 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFT 193 SA ++ FD +R + L GEI + A+D RPF + T +G + ALGT F V + + T Sbjct: 149 ISAVNLHFDIERRILELIKGEILVDVAQDT-DRPFLIETAEGSIQALGTRFVVDRHEQTT 207 Query: 194 QLDVQQHAVEVLLASAPAQKR----IVNAGESLQFSASEFGAVKPLDDESTS--WTKDIL 247 L + + V V A A+ +V AGE + +A A++ +D + S W L Sbjct: 208 TLTMLESKVSVQTAEQRAEHSHESTLVQAGERIHITAQGVSAIETIDTRTISDAWQYRHL 267 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLRLSGTFPLKNTDAILNVIAQTLP-VKIQ 305 ++PL EV+ L R+R G + D A + G+ ++ PL +TD L ++ +LP ++I+ Sbjct: 268 VVQNRPLTEVLDELNRHRRGHILYDRAQLQGIDMAVVLPLDDTDRALQLLVDSLPMIRIR 327 Query: 306 SITRYWI 312 ++T Y + Sbjct: 328 TLTPYLV 334 >UniRef50_A1BAQ4 Putative FecR n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAQ4_PARDP Length = 316 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 16/299 (5%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDT 75 A+ W L+ +V+ Q ++ W ++D ++ A+ + + +LG + A D Sbjct: 19 AAEWVIRLADPQVTDQARNAFRDWLDRDPAHRDAFDDAQRVWQELGLI-------AQGDA 71 Query: 76 RLTRRHVMKGLLLLLGAGGGWQLW--QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 RR +G+L ++ G+ LW Q + L+AD+ A G L DGS + L++ Sbjct: 72 NPGRR-CGRGMLAMVALAAGFALWFWQDDLRIRLQADHVAAVGENLAVTLRDGSRVELSS 130 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEFTVRQQDN 191 SA V +D +R VRL G T A Q RPF V R ++TALGT+F+V QD Sbjct: 131 GSALAVDYDGTRRLVRLLEGSAYFTAEPSARQQGRPFVVEARGIRITALGTQFSVDLQDG 190 Query: 192 FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWTKDILSFS 250 + V +H+V V S A ++ G + A P + D + +W L F Sbjct: 191 DVAVLVAEHSVRVEPVSGAAPPVVLAEGMGVDARPDAIPAPAPRNVDFANAWRSGELVFD 250 Query: 251 DKPLGEVIATLTRYRNG--VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 D+PLGEV+ L RYR+G VLR +AG R+SG F + ++ IA L ++ S+ Sbjct: 251 DRPLGEVVRELNRYRHGRIVLRGGD-LAGRRVSGVFHTDDIGRAVDRIAAELGLRRLSV 308 >UniRef50_B7VA52 Probable transmembrane sensor n=5 Tax=Pseudomonas RepID=B7VA52_PSEA8 Length = 317 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 9/313 (2%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQV----ENLRNQ-LGGV 63 R + L A+ W A+L ++ +QQW + D ++ + ++ ++ R++ L G+ Sbjct: 6 RERILDEAAQWMALLQSGHAGAEERLAFQQWRQADAEHGAVFDRLSLGLQSFRDEPLHGL 65 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQ-SETGEGLRADYRTAKGTVSRQQ 122 + AL RR + + L L L + G D T G + Sbjct: 66 RAEQLIGALEAPSARRRFLQRSLALAAFGVATLALGRIGIVGFPWPGDLYTGTGQRQSFR 125 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 LEDGS L L+ +S FD ++R +RL G + + A+D RPF V T +GQ+ A GT Sbjct: 126 LEDGSQLVLDARSRVRPEFDGYRRRLRLREGRLLVDVARDP-ARPFVVDTGRGQVEAQGT 184 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 F V +++ V + V + +A ++ ++ G+S +F AS A P + ++W Sbjct: 185 RFQVSDDGASSRVVVLESRVRI--TTADGRQCLLERGQSARFDASAILARGPAEGGESAW 242 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 L D+PLGEV+ L YR G++ A LR+SG +PL ++ A L ++ Q+LP+ Sbjct: 243 LDGRLEVRDRPLGEVLEALRAYRRGIISVADDAAALRVSGIYPLDDSGAALALLEQSLPI 302 Query: 303 KIQSITRYWINIS 315 ++ YW++I+ Sbjct: 303 RLDYHGPYWVSIA 315 >UniRef50_Q2KUB5 Heme uptake transmembrane sensor n=2 Tax=Bordetella avium RepID=Q2KUB5_BORA1 Length = 307 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 136/309 (44%), Gaps = 17/309 (5%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA- 68 R+ R A+ W L+ + S A ++W D ++ AWQ + + + LGG+P + Sbjct: 9 RRVAREAARWLMHLASGQASADDAAACERWRASDTRHEQAWQHAQRVNDLLGGLPPQLLH 68 Query: 69 ---SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 R H TR M G+ L G W W+ GL ADYR+A G L Sbjct: 69 ATLGRPAHKTRRLALKAMAGMAL--GTPAAWAAWRGGRETGLLADYRSAPGERRDIVLPG 126 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 G+ ++LN+ SA D+ D L GE+ + + QGQ+TA + Sbjct: 127 GTFVSLNSGSALDLSDDG----AVLRAGEVYVRAGLRCVAH-----APQGQVTASHARYA 177 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 +R +++V + V+V A A F A + +W + Sbjct: 178 LRLDAEGCRIEVYEGQVQVRPALGVAATLAAPQAAC--FDAYTVRLRSAALESEPAWLRG 235 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 +L + PL A L RYR G++RC AVA L +SGTF L NT+ IL + LPV ++ Sbjct: 236 VLHVNAMPLAAFAAELGRYRRGLVRCAQAVAALPVSGTFQLDNTEGILRALPALLPVSVR 295 Query: 306 SITRYWINI 314 S T YWI I Sbjct: 296 SRTPYWIVI 304 >UniRef50_A6W3B6 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B6_MARMS Length = 313 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 12/319 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M P D R ++ A+H A L + S + +W D DN+ AWQ + + Sbjct: 1 MQPNQIDLER--IQQAAHLMARLWSDEPSKHDQHACNKWRAADPDNEKAWQCLIQAQAHF 58 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLL----LLGAGGGWQLWQSETGEGLRADYRTAKG 116 G P + +++RRHV+ + L L AGG + + TA G Sbjct: 59 GDAPKETIQIIARSRKMSRRHVLSLMGLSAGGLFFAGGYIHNRSISSHASYYKNLATATG 118 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 V L D + L +NT++ + + HQ +L GE + ++ P+++ T G Sbjct: 119 EVRSFPLSDINKLVMNTKTTLAMPTE-HQ--FKLDDGEFFLDVSQAT---PYQIETMDGI 172 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ++ + +R+ D+ T++ V LL ++ GES+ F+ + D Sbjct: 173 ISFNQGKLNIRRTDDITRISVFSGQSVQLLGKQMHNPLSISPGESVSFNTINTSRISSTD 232 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + W L PL + I L+RYR G++R P + L ++G F + NTD IL + Sbjct: 233 PNTIGWVTGKLVAQRMPLTDFIHELSRYRKGIVRVAPELRQLAVTGVFSIDNTDQILQQL 292 Query: 297 AQTLPVKIQSITRYWINIS 315 +LP+ I +T YW+N++ Sbjct: 293 QASLPINIYQLTPYWVNVT 311 >UniRef50_Q2RUF5 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUF5_RHORT Length = 328 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 98/313 (31%), Positives = 145/313 (46%), Gaps = 28/313 (8%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS--R 70 L+ A+ W+A L R + + W +D A++Q E L L +A+ Sbjct: 18 LKQAAIWHARL---REDDRHRKAFALWLGEDPRKAEAFRQTERLWAALEAPTAALATDGA 74 Query: 71 ALHDTRLTR----------RHVMKGLLLLLGAGGGWQLWQSETGEGL----RADYRTAKG 116 AL R R R V ++L LG L + G+GL RAD TA G Sbjct: 75 ALMVRRQRRPPIIWRRSAGRRVALAVVLALG------LVLAPRGQGLIDSLRADDVTAPG 128 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 L DGS++ LNT SA V R +RL+ GE A DA +RPF V T G Sbjct: 129 ERRSLVLADGSVVALNTDSALAVAMGGDHRRLRLFRGEAWFEVAHDA-RRPFVVETGDGT 187 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 +T GT F +R + T++ + + VE+ A A Q +I+ GE + GA+ D Sbjct: 188 VTVTGTRFNLRIDEAGTRVSLSEGRVELSPAHAAGQVKILRPGEQAVVGKTAVGAIDTFD 247 Query: 237 DES-TSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILN 294 + T W + + F D L +V+A L RYR G +L +A LR+SG F + + + +L Sbjct: 248 ATAVTGWRRGQIVFYDTALRQVVAELNRYRRGPILLARRDLADLRVSGVFDVSDPEGVLA 307 Query: 295 VIAQTLPVKIQSI 307 + TLPV++ + Sbjct: 308 ALTGTLPVRMTKV 320 >UniRef50_A5VYP7 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas putida RepID=A5VYP7_PSEP1 Length = 323 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 90/313 (28%), Positives = 139/313 (44%), Gaps = 14/313 (4%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDN-------QWAWQQVENLRNQLGGV-PGDV 67 A+ W L + + + W + D + Q QV+ LR Q G V G Sbjct: 10 AAEWALCLGEGELDADETREFDAWLQADPRHGATLRRMQGVISQVQALREQRGPVGAGLR 69 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 A + + R + GL L + G L T AD TA Q LEDGS Sbjct: 70 AGAQVSASGSGARRTLLGLALAISLLGTLSL-SGGTPRDWLADLHTAPAEWRSQTLEDGS 128 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 LTL SA DV F +R +RL +G++ + + D RPF + T +G ALGT F V Sbjct: 129 QLTLAGNSAVDVEFSTGERRIRLLHGQVLVDVSHDP-TRPFVIQTEEGSFKALGTRFVVS 187 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST--SWTKD 245 + ++L + + VE A + Q +V GE + G + +D +W Sbjct: 188 EGHARSELTMLESRVEARTAVSGDQL-VVGPGERAWVARDGLGPLPAIDPARVDRAWQHH 246 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 L PL +V+ L R GVLR D A+ +++S PL +++ L ++A+ LP++I Sbjct: 247 QLVADGVPLDQVLDALAEQRRGVLRFDRQAMQAIKVSAVLPLDDSERALRLLAEALPIRI 306 Query: 305 QSITRYWINISPL 317 + R+W + P+ Sbjct: 307 GGVGRWWTTVEPV 319 >UniRef50_Q2KZD9 Putative transmembrane sensor protein (Fragment) n=4 Tax=Bordetella RepID=Q2KZD9_BORA1 Length = 339 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 3/206 (1%) Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 AD TA G R QL DG+ L L+ +S ++ F A R + L G +++T A D RPF Sbjct: 132 ADTATATGERRRYQLTDGTELLLDARSRVNLEFTATSRRLMLLEGAVSVT-APDDPNRPF 190 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 V T +G + + G + VRQQ T V H ++++ + + + G +F A+ Sbjct: 191 VVETAEGLVQSNGKRYMVRQQVRRTL--VVAHEGDLVVETVDGARGHIPQGFGARFDAAR 248 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN 288 A +P +W ++ + +PL E++A L YR+G LR A GL ++G +PL + Sbjct: 249 LDAARPELAAEAAWEGGWINANGRPLAEIVAALRPYRHGTLRVSMAAGGLPVTGMYPLDD 308 Query: 289 TDAILNVIAQTLPVKIQSITRYWINI 314 +DA L +++ +P+ IQ +T +++ I Sbjct: 309 SDAALQALSERMPIAIQRLTPWFVAI 334 >UniRef50_A7IJ25 Anti-FecI sigma factor, FecR n=3 Tax=Alphaproteobacteria RepID=A7IJ25_XANP2 Length = 320 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 92/316 (29%), Positives = 147/316 (46%), Gaps = 10/316 (3%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL---RNQLGG 62 T R A +A W+ + +P + A +QQW DN+ + +E L +Q+G Sbjct: 9 TTVRPTARDAALGWFVKMRSGEATPAEVADFQQWIAAAADNRREYDALEALWGDLDQVGD 68 Query: 63 VPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 AS ++RR + G + A + RT G + Sbjct: 69 PRRVAASVPASRPMMSRRGLFLGAAGVAAAVV--AGVALGVPDWFDGAIRTGVGEQRQLT 126 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 L DGS + L+ SA ++F R + L G A D R F V G TA GT Sbjct: 127 LADGSRVVLDADSALSLQFTPQARRLTLQRGRAFFDVAPDP-ARAFSVTAAGGVTTATGT 185 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-ESTS 241 +F+V N + V + AV + A A A R+ AGE++ + AS G + + D ++++ Sbjct: 186 QFSVHLWSNEVTVAVSESAVSIR-AGAAALSRL-KAGEAVSYDASGIGETEQVSDAQASA 243 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W + L F D+PL +VIA + RYR G ++ D + LR+SG F ++ D +L I ++L Sbjct: 244 WRRGKLIFEDRPLRQVIADVNRYRPGTIMVTDSTLLRLRVSGIFDIRQPDGVLEAITRSL 303 Query: 301 PVKIQSITRYWINISP 316 PV+ ++TRY + + P Sbjct: 304 PVRSMALTRYLVLLYP 319 >UniRef50_A9VXG0 FecR protein n=6 Tax=Methylobacterium RepID=A9VXG0_METEP Length = 324 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 11/308 (3%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R A+ W A LS + ++ W + D + + +++ L +LG +P D R Sbjct: 24 REAAAWVARLSSSDATEADHRAFETWRKADPVHAAVYAEMDALWRRLGHLP-DPRPRKTS 82 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 D + L + G +++ + LRAD + G + L DGS + LNT Sbjct: 83 DKTSNKTPKSLAGLAAVALIAGALAYETGLLDRLRADLWSGVGAIEHATLPDGSRVDLNT 142 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT--ALGTEFTVRQQDN 191 +A VRF +R + L GE + D RPF + R G L+ A+GT F +R Sbjct: 143 DTAIAVRFTEGERGIALLRGEASFDVVPD-RSRPF--VVRGGGLSVRAVGTRFFLRADGA 199 Query: 192 FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSD 251 + V + V+V SA + + +V+AGE ++ + +T+W L +S Sbjct: 200 DRPVGVAEGRVDV---SAESGRVVVSAGEEVRIGGDALHVAAADVERATAWRDGRLIYSG 256 Query: 252 KPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 KPL V+A L RYR G ++ D + R++G F +NTD L+VIA T+ +I+ ++ Sbjct: 257 KPLAAVLAELNRYRRGRIVLLDRGLGERRVTGAFDARNTDDALDVIAATMGTRIRRLSPL 316 Query: 311 WINI-SPL 317 + + SPL Sbjct: 317 LVLVGSPL 324 >UniRef50_B9JNI9 FecR iron sensor protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNI9_AGRRK Length = 317 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 143/306 (46%), Gaps = 13/306 (4%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHD 74 +A+ W A L + A +Q W D + A+ ++ L L P V+ +L Sbjct: 16 AAAGWVARLQSADATDLDRADFQCWLHADPSHAAAYDEMNALWGSLRDAP--VSLDSLKA 73 Query: 75 TRLTRRHVMKGLLLLLG--AGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLN 132 R + + GL ++LG A + + Q + RADY T G V LEDG+ + L+ Sbjct: 74 RRSSGARAV-GLAVMLGVIAASSYTIQQLGLIDRWRADYYTDVGEVRSVVLEDGTQVDLD 132 Query: 133 TQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ-QDN 191 T +A VR+ A +R V L G+ K+ RPF V Q TALGT ++V+ + Sbjct: 133 TDTAIAVRYTAGERRVELLRGQAFFDVTKNP-ARPFVVDEGQLSATALGTHYSVQAPTGS 191 Query: 192 FTQL-DVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWTKDILSF 249 Q+ V++ VEV ++ AG+++ AS + D T+W + L F Sbjct: 192 LPQMVQVEEGIVEVKTGD---NDTVLRAGDAMTVDASGKATLAKADVANETAWRQGKLVF 248 Query: 250 SDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 S PL +V TL RYR G VL D A ++SG F L NTD L +I LPV + +T Sbjct: 249 SATPLSKVAETLARYRRGRVLVVDAQAADRKVSGVFDLSNTDEALAIIESNLPVSVTRVT 308 Query: 309 RYWINI 314 + I Sbjct: 309 DALVFI 314 >UniRef50_Q3SR62 FecR protein n=3 Tax=Bradyrhizobiaceae RepID=Q3SR62_NITWN Length = 377 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 93/303 (30%), Positives = 134/303 (44%), Gaps = 21/303 (6%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS---RAL 72 A W+ +L E + + + W DQ ++ AWQ VE + L + +V + Sbjct: 13 AVQWFVLLRDEDATAEDRRAFAHWLAFDQTHETAWQSVERMWGGLDALAPEVVRQRRKPR 72 Query: 73 HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLN 132 ++RL R + LL +G G WQ+ + GL ADYRTA G L+DGS + L Sbjct: 73 RNSRLKRGAAVALLLAAIGIG--WQMAPT----GLFADYRTAIGERRMIVLQDGSQVDLG 126 Query: 133 TQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF 192 SA DV F +R VRL GE T KDA RPF V G++ LGT F V+ D Sbjct: 127 AASALDVSFGTGERRVRLLTGEAFFTVTKDA-ARPFIVAAENGEVKVLGTAFDVKIADGV 185 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNA---------GESLQFSASEFGAVKPLDDEST-SW 242 AS A R G+ +++ + AV D ES +W Sbjct: 186 AVAVAHNAVQVSAQASTQAPDRPDVVPDAPVVVRQGQIVRYDFAGISAVGAADLESIQAW 245 Query: 243 TKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 L F D PL V+ L RYR G ++ + R++ F T+ L+ IA++L Sbjct: 246 RHGQLVFRDVPLDTVLTELQRYRFGRIVLIGGTLGQRRVTAVFDAAKTEQALDTIAESLS 305 Query: 302 VKI 304 ++I Sbjct: 306 LRI 308 >UniRef50_C5BRF0 Transmembrane sensor n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRF0_TERTT Length = 345 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 26/215 (12%) Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 + A+Y+TA G + + L DGS + LNT+S V F AH+R + L GE AKD +R Sbjct: 112 IHAEYQTATGEIEQYLLPDGSRIKLNTRSNVVVDFSAHERAIHLQEGEANFEVAKDP-KR 170 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASA----------------- 209 PF V T +G +TA+GT F VR Q + L V + V+V AS+ Sbjct: 171 PFVVYTNRGSITAVGTAFNVRVQSSGIDLVVTEGKVKVDAASSVLEPVRYDDKPSTRTEL 230 Query: 210 ---PAQKRI-VNAGESLQFSASEFGAVKPLD---DESTSWTKDILSFSDKPLGEVIATLT 262 AQ+ + V+AGE L+F + P D SW + +L+F PL E + ++ Sbjct: 231 PDRSAQQIVAVSAGEKLRFGNTTQHHTNPSQQEIDRQLSWQQGMLAFDSTPLAEAVREIS 290 Query: 263 RYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 RY + ++ DPA+A L + G F DA+L V+ Sbjct: 291 RYTDTHIIIEDPALAELPVGGYFKAGEVDAMLEVL 325 >UniRef50_D1T576 Transmembrane sensor, putative n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T576_9BURK Length = 224 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/252 (31%), Positives = 116/252 (46%), Gaps = 50/252 (19%) Query: 79 RRHVMKGLL-LLLGAGGGWQL----WQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 RR +K L L + A GW W++ T AD+RTA G + LEDG+ +TL + Sbjct: 5 RRRALKRLSWLAIAAPAGWLTSRLPWRTWT-----ADFRTATGELHDALLEDGTQITLGS 59 Query: 134 QSAADVRFDAHQRTVRLWYGE--------IAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 SA D F+A+ R L GE + T A P V T +G + A GT+F Sbjct: 60 ASAIDAAFEANVRRGHLLEGETMGRPLSDVRGTVGTRATHPPLLVQTAEGVVEARGTQFG 119 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 V+Q+D FT+ A LD WT+ Sbjct: 120 VQQRDGFTR--------------------------------DGIAAPHTLDPREAMWTRG 147 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 +L +D + +++ L RY GVLRC VA LR+SG + L +TDA L ++ +T P++++ Sbjct: 148 LLDANDMRIADLVDELARYHAGVLRCAADVADLRVSGIYQLTDTDATLALLQRTYPIRLR 207 Query: 306 SITRYWINISPL 317 SIT YW + + Sbjct: 208 SITPYWTLVEAI 219 >UniRef50_Q7VZ09 Putative signal transduction protein n=2 Tax=Bordetella RepID=Q7VZ09_BORPE Length = 320 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 108/222 (48%), Gaps = 8/222 (3%) Query: 96 WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEI 155 W WQ L AD T G + G L L + SA +R DA +R + L GE+ Sbjct: 103 WAPWQR-----LVADASTGVGERRQIVPGPGVRLVLASDSAVRLRIDATRRAIALLRGEM 157 Query: 156 AITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP-AQKR 214 + A Q +V T G A F V + ++ V +V+V ASAP A Sbjct: 158 LVDVHSGAAQPALQVDTGYGMALAEQARFGVCRAGGSARIGVYAGSVQV--ASAPHAPWH 215 Query: 215 IVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPA 274 AGESL+ + + + ++W +L L + A L RYR GV+R DPA Sbjct: 216 RGEAGESLRLDGAGVPRRGRVAADESAWEDGLLVVHGWRLDRLAAQLARYRLGVIRVDPA 275 Query: 275 VAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 VAGLRLSG FPL + + L + Q+LP++I+ T YW++++P Sbjct: 276 VAGLRLSGVFPLDDAERALAAVRQSLPIEIRRHTAYWLSVTP 317 >UniRef50_Q15XC6 Putative FecR n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XC6_PSEA6 Length = 350 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 21/222 (9%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y T G L DGS L LNT S +V + QR + L+ GE A+D RPF V Sbjct: 125 YFTKIGEQKNIILTDGSELLLNTNSIVEVNYTRKQRNITLFQGEANFGVARDK-SRPFTV 183 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL-------------LASAPAQKRIVN 217 G + ALGT F+VR + N + V V V A + IV+ Sbjct: 184 KAGTGDVRALGTNFSVRLKGNLVNVLVSHGTVRVRANENIDATHHADNFAHKDKNQVIVS 243 Query: 218 AGESLQFSASEFGAVKPLDDESTS----WTKDILSFSDKPLGEVIATLTRYRN-GVLRCD 272 AG ++ F E +V+ + DES + W K LSF D+PL +V+A L+RY N ++ D Sbjct: 244 AGNNVVFDDIEVESVEQVSDESIAKKLYWRKGFLSFDDEPLSDVVAELSRYTNLNIVIAD 303 Query: 273 PAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT--RYWI 312 ++ +++ G +P+ N + + + L + ++ ++ Y+I Sbjct: 304 KSIQAMKVGGFYPIDNLETVFTTLELNLGLHVKKMSGGYYYI 345 >UniRef50_C1DIF1 Anti-sigma factor protein, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DIF1_AZOVD Length = 335 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 99/337 (29%), Positives = 152/337 (45%), Gaps = 34/337 (10%) Query: 5 LTDSRR-QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 +TD+R L A W +L P++ A + W E + ++ AW++ E + +L V Sbjct: 1 MTDTRNDNLLEQALEWCVLLQDPNAGPEERAGFAAWLETSEAHRQAWRRAEEVWRRLDPV 60 Query: 64 PGDVAS--------------------RALHDT--RLTRRHVMKGLLLLLGAGGGWQLWQS 101 +AS +AL R TR +LLLGA GW+ Sbjct: 61 AERLASGAGPSPDRLAATPAVAPVRPQALKPAFRRKTRALRALAAMLLLGAILGWRY--- 117 Query: 102 ETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK 161 ADYRTA +LEDGSL+ L SA DV + +R +RL GE A Sbjct: 118 --DPAWLADYRTAVAEQREWRLEDGSLIRLAPDSALDVDYGTARRRIRLHRGEAWFRVAA 175 Query: 162 DALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGES 221 D RPF V + G ALGT F +R++ + ++ V +H V+V L Q++ + G++ Sbjct: 176 DP-ARPFVVESATGHTQALGTAFDIRRRGDRVRVLVSEHQVQVSLDR---QRQRLEPGQA 231 Query: 222 LQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLR-CDPAVAGLR 279 L + A F V+ +D +W L F D PL +V+A L RY G L+ D A+ L Sbjct: 232 LTYDADGFSPVRNVDVANELAWQNQRLVFQDAPLAQVLAELQRYMPGRLQLTDSALGSLS 291 Query: 280 LSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 ++ F + L +A L +++ I + + P Sbjct: 292 VTAVFDTRQPRQALESLADVLALRLTRIGPWLTLVRP 328 >UniRef50_Q4K9E6 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K9E6_PSEF5 Length = 326 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 28/310 (9%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV--ASRALH 73 A+ W+ L VSP+Q+ R+QQW +D ++ +Q +E L VP A A Sbjct: 17 AAAWFTRLQEPEVSPEQQLRFQQWLAEDPQHRHEFQLLEALWAATDLVPRARLQALCATP 76 Query: 74 DTRLTRRHVMKGLL------LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 + RR +++ L L +G G L Q + A + TA G L DGS Sbjct: 77 PAKARRRPLLRFALAAGVATLAVGLGLFSGLNQPVS---YSAQFVTALGERRHVALPDGS 133 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 + LN++S VR+ +QR + L GE D RPF V G++T GT F VR Sbjct: 134 QIDLNSRSHLQVRYARNQRLIELVEGEALFNVEHDT-DRPFVVAAGAGKVTVTGTRFDVR 192 Query: 188 QQDNFTQLDVQQHAVEV---------LLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 + + T++ V+Q V+V +A P Q V+ + ++ AV P + Sbjct: 193 RDERQTRVAVEQGRVKVQGRDAATDDFIALTPGQGTHVDEHGKV----AQAYAVNP--EA 246 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAG-LRLSGTFPLKNTDAILNVIA 297 T+W L F++ L EV+A ++RYR LR A G LRL+ F +T A+L + Sbjct: 247 LTAWRSGKLVFNNASLAEVVAEVSRYREQPLRVASAAVGELRLTSVFKSDDTQALLKALP 306 Query: 298 QTLPVKIQSI 307 LPV+++++ Sbjct: 307 SILPVEVRTL 316 >UniRef50_B1ZHY6 Anti-FecI sigma factor, FecR n=2 Tax=Methylobacterium RepID=B1ZHY6_METPB Length = 325 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 144/318 (45%), Gaps = 28/318 (8%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVE------NLRNQLGGVPGDVA 68 +A W ++ +S Q ++ W D N+ AW +++ + + G + DV Sbjct: 14 AAIQWMVEINSGEMSESQVRAFEAWLRTDHANEAAWVRLQEGLMPCGIAARSGTMGHDVL 73 Query: 69 SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLR----------ADYRTAKGTV 118 S+ L R +RR + GL L+G G G G+ AD T+ G Sbjct: 74 SKRLAAGRQSRRTFIAGLAGLIGVG--------TIGSGIADRFVPLGNILADRFTSTGGQ 125 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 L DGS L L ++SA ++ ++ R V+L GE+ + A A PF + L Sbjct: 126 ETVALADGSELVLASRSAINIVYETGLRAVQLLDGEVLVRAAPRAT--PFEIRAGSMALE 183 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 G F V +D +L + AP + + G+ ++F+ K + Sbjct: 184 TFGGTFLV--EDRAERLAATGVEGSGRIRHAPGKPESIAPGDMVEFTGGYRRWRKVDIEA 241 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 +T+W + +L D L + L RY +G+++ DP++A LR +G F L++ +A L+ +A+ Sbjct: 242 ATAWLEGLLVAKDSDLLAITTRLQRYFSGIIQVDPSIADLRATGVFSLRHPEAALDALAE 301 Query: 299 TLPVKIQSITRYWINISP 316 +L + + ++R WI + P Sbjct: 302 SLNLSLTRVSRLWIKLGP 319 >UniRef50_Q88PI4 Transmembrane sensor, putative n=6 Tax=Pseudomonas RepID=Q88PI4_PSEPK Length = 328 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 98/189 (51%), Gaps = 8/189 (4%) Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 +L DGS L LN + V F A QR VRL GE+ + A D+ RPF V T QG + G Sbjct: 133 ELPDGSHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDS-NRPFVVDTAQGSVIVTG 191 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVL-LASAPAQKRIVNAGESLQFSASEFGAVKPLDDES- 239 T F VR T++ V+Q +V V +PAQ + AG+ A A + Sbjct: 192 TRFDVRLDPASTRVAVEQGSVRVQGKGDSPAQ---LTAGQGSHIDAQGLVAAPYAVNTGA 248 Query: 240 -TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLRLSGTFPLKNTDAILNVIA 297 T+W + L F + L EV+A +RYR LR P VA LRLSGTF +TDA+L + Sbjct: 249 ITAWRQGKLVFDNATLAEVVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTDALLRALP 308 Query: 298 QTLPVKIQS 306 LPV I++ Sbjct: 309 SILPVAIKA 317 >UniRef50_D1ST92 Anti-FecI sigma factor, FecR n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1ST92_9BURK Length = 325 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 9/212 (4%) Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 AD R+ +G Q L+DGS LTL+ A R DA QR V L G + + A DA RPF Sbjct: 107 ADLRSTEGQWRHQVLDDGSQLTLSGAGALRWRLDAQQRVVELLRGSVLVQVAHDA-SRPF 165 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA----SAPAQKRIVNAGESLQF 224 V T G++ ALGT FTV ++++ + V V S + V+AG+ + Sbjct: 166 YVQTPLGRVRALGTRFTVTYDAAGVRVEMLESRVAVQTPQQWQSGSHEAVEVSAGQRVTL 225 Query: 225 SASEFGAVKPLDDEST--SWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLS 281 + G V+ LD + W + L D+PL EV+ L R+ G L D A++ +R++ Sbjct: 226 GDAGVGRVERLDPQGVEQGWRRHQLVVDDRPLSEVLDELARHHTGSLHFDRAALSTVRMT 285 Query: 282 GTFPLKNTDAILNVIAQTLP-VKIQSITRYWI 312 G PL +T L ++ QT P ++++S+ W+ Sbjct: 286 GVLPLDDTGQALQLLQQTFPQLRVRSLASRWV 317 >UniRef50_B7V267 Probable transmembrane sensor n=7 Tax=Pseudomonas aeruginosa RepID=B7V267_PSEA8 Length = 331 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 115/225 (51%), Gaps = 7/225 (3%) Query: 86 LLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQ 145 LL +L GG WQ + + RADY A G V+ +L DGS L+L+ SA VR D Q Sbjct: 103 LLAMLWLGGWWQ--PGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQ 160 Query: 146 RTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL 205 R V L G A+ +DAL PF V +G+ LGTEF VR+ T++ V Q V V Sbjct: 161 RRVELLRGAAALRVKRDAL--PFVVEAGEGRARVLGTEFEVRRGAGATRVTVLQGRVAVS 218 Query: 206 LAS-APAQKRIVNAGESLQFSASEFG-AVKPLDDESTSWTKDILSFSDKPLGEVIATLTR 263 + A A + ++ AG+ + F+ + G V + +W + LSF +PL EV+ L R Sbjct: 219 AGTGAGAAEEVLGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDELAR 278 Query: 264 YRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 Y G +L D A+ +SG+F + +A L + L + Q + Sbjct: 279 YYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQIL 323 >UniRef50_B0T8M8 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0T8M8_CAUSK Length = 333 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 16/301 (5%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD---- 66 +A R A+ W+ L+ + + + W + + N+ A++++E++ + G+ D Sbjct: 10 RATREAADWFTRLNEPPIEVDELEAFSAWNARPE-NRAAYERLEDISRAMAGLQDDPDMR 68 Query: 67 -VASRALHDTRLTR----RHVMKGLLLLLGAGGGWQLWQSETGEGLRAD-YRTAKGTVSR 120 + AL R R R V++ +++ L T LRA Y T G Sbjct: 69 QATAEALQRGRTRRERQARFVVRPRIIIGALAAACVLAAIATSVFLRAPTYSTRVGESLS 128 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 LEDGS + LNT SA VRF A QR V L G+ A +A QRPF V+ Q+ AL Sbjct: 129 ATLEDGSRIQLNTDSAVKVRFTAGQRRVDLVRGQAMFEVAHNA-QRPFVVVAGDAQVRAL 187 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLAS-APAQKRI-VNAGESLQFSASEFGAVKPLDDE 238 GT F VR+ ++ + Q +VE+ S +PA R+ G +L+ + S A KP+D Sbjct: 188 GTRFDVRRVGQEVRVVLAQGSVEITDRSLSPAPWRLKAGQGLALKPAQSVAAAAKPVDVP 247 Query: 239 S-TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRL-SGTFPLKNTDAILNVI 296 S TSWT L+F PL + +A + RY + P+V G RL G F ++D + + Sbjct: 248 SATSWTVGKLTFQGVPLTDAVAEVNRYSRDKIVLAPSVPGDRLVGGVFTAGDSDDFIAAV 307 Query: 297 A 297 + Sbjct: 308 S 308 >UniRef50_D2LKP6 Anti-FecI sigma factor, FecR n=2 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKP6_RHOVA Length = 326 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 135/311 (43%), Gaps = 32/311 (10%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV---------PGD 66 A W+ VL + + R+ W + D + AW ++E L + L V PG Sbjct: 13 AVEWF-VLRDASATDEDRERFLAWRDADPVHARAWGEIERLWSNLDHVSPQSLGLRRPGR 71 Query: 67 VASRALHDTRLTRRHVM-----------KGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 L + HV+ G L+L A W W + ADYR+ Sbjct: 72 ENVSLLMPSHTPPPHVVGRRALSFGSRVSGAALVLCALLIWA-WMPHSF----ADYRSGI 126 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G L+D S + L + +A DV F R VRL GE T AKDA RPF V T QG Sbjct: 127 GERRTVLLDDHSEIELGSATAIDVAFSPTHREVRLLEGEAFFTVAKDA-ARPFIVATAQG 185 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 ++ GT F V+ D + V +H+V V SA V G+ ++F Sbjct: 186 EIEVRGTAFNVKITDA-VAVAVAEHSVSV--TSAGGNTASVQQGKMVRFDQKAVSPASNA 242 Query: 236 D-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAG-LRLSGTFPLKNTDAIL 293 D D +W +D L F D PL V+A L RYR G + AVAG R++ F D L Sbjct: 243 DLDAIQAWRRDQLVFIDTPLEAVLADLRRYRVGRIDLLSAVAGQKRITAVFEKNRIDDAL 302 Query: 294 NVIAQTLPVKI 304 + IA++L +++ Sbjct: 303 DTIAESLDLRV 313 >UniRef50_Q3SSZ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SSZ1_NITWN Length = 319 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 85/289 (29%), Positives = 140/289 (48%), Gaps = 23/289 (7%) Query: 29 SPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRL------TRRHV 82 S + +++W ++ ++N+ A++ + L G+ + L+D L R V Sbjct: 30 SAHESRAFEEWLDRGEENRAAYEAAQRLM-------GEARTAILNDPALRNFKVKPRPRV 82 Query: 83 MKGLLL-LLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVR 140 K L + LGA G S+ L A+ + G + +L DG+ + LN SA R Sbjct: 83 AKTLAVAFLGAALAGSAFVYSDGPMRLLANAISGTGEMPTIELADGTTIQLNAFSAISYR 142 Query: 141 FDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQH 200 F A RTV L G+ AKDA RPF V GQ TALGT F +R N T++ V +H Sbjct: 143 FTAETRTVTLLRGQAFFQVAKDA-SRPFVVEANGGQTTALGTAFDIRLGQNSTEVTVTEH 201 Query: 201 AVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST----SWTKDILSFSDKPLGE 256 AV V + + VN G+ + A G VK + T +W + L + P+ + Sbjct: 202 AVSVTPHTHAEPEVRVNEGQQAVYDAD--GKVKDVRQADTHAVLAWRRGQLVVDNAPVAD 259 Query: 257 VIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 V+A + R+ G ++ + +A R+SGTF + +TD+ L ++ ++L + + Sbjct: 260 VVAEIDRHFAGRIIISNSDLAARRVSGTFTVTDTDSALALLRESLGLSV 308 >UniRef50_B7UW19 Probable transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=B7UW19_PSEA8 Length = 327 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 92/318 (28%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 1 MNPLLTDSRRQAL-RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 + PL D + + A++W++ S A + W D ++ A + +E L + Sbjct: 7 LEPLFADETEEDIDHRAAYWFSRRRSGHFSAACRAELEDWLRADPRHREALEGMERLWRE 66 Query: 60 LGGVPGDVASRALHDT-------RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYR 112 G+P AL D RL R + + A L+ + G Y Sbjct: 67 FDGLP----RPALDDIPEPVPAWRLPR--ALAAAFFVFCALLVATLFWRDQSLGPNLAYG 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 TA G L DGS L L+ + VR+ R V L GE+ + D RPFRV + Sbjct: 121 TAPGEQREVVLADGSKLFLDVDTQVQVRYAERTRDVLLKKGEVFFVVSHDP-ARPFRVGS 179 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS----E 228 ++T LGT+F+VR+ + V+Q V + + + ++ AG+S + + E Sbjct: 180 GDSRVTVLGTQFSVRRNAQALAVAVKQGRVALQPSLEKDAEHVLLAGDSARLDLADQRLE 239 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLK 287 G V P ++ SW L F DKPLGE++ L+RYR +R DP +AG R+SGT + Sbjct: 240 LGHVAP--EQVASWRDGQLVFRDKPLGELVEELSRYRAAPIRLGDPRLAGKRVSGTVRIA 297 Query: 288 NTDAILNVIAQTLPVKIQ 305 D L + LPV++Q Sbjct: 298 RPDDFLLALPALLPVRVQ 315 >UniRef50_Q2L2C5 Transmembrane sensor protein n=1 Tax=Bordetella avium 197N RepID=Q2L2C5_BORA1 Length = 303 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 24/318 (7%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + D+RR+A+ W+ VL S A+ W D +Q AW +V + + VP Sbjct: 1 MLDARRRAI----EWWVVLQSGTASASDRAQLNDWLLADPRHQEAWSRVLEVEQGVRRVP 56 Query: 65 GDVASRALHDTRLTRRHVMKGL-LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 +A T +RR V++GL + A GW +++ + L AD T G V + Sbjct: 57 AALAQAVFKPT--SRRAVLRGLGAASIAALSGWAVYRHTPWQRLIADRSTGLGEVDTLAM 114 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 G + L + +A V + +RL GE+ + A F + T + A Sbjct: 115 APGLDVALASDTAVQVYRKRGHQALRLLRGEVFVHAQGVA----FTLDTDSASIAADSAR 170 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQK-----RIVNAGESLQFSASEFGAVKPLDDE 238 F V LD Q VE+L ++ R+ A + L+ SAS+ + + Sbjct: 171 FCV-------SLDEQGCRVELLDGELAIERGDYSLRVAGA-QGLRLSASDGLTRLAPNPD 222 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 + +W +L D L E++A L R+R+GV+ D +AGLR+SG FPL + + L +A+ Sbjct: 223 AAAWVDGMLVAHDWSLRELVARLARHRHGVIHVDADIAGLRVSGVFPLYDAERALAAVAR 282 Query: 299 TLPVKIQSITRYWINISP 316 +LP+ + W+++ P Sbjct: 283 SLPIALHRRGPLWLSVVP 300 >UniRef50_Q1I5S1 Putative FecR-like transmembrane sensor n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I5S1_PSEE4 Length = 320 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 83/274 (30%), Positives = 126/274 (45%), Gaps = 22/274 (8%) Query: 39 WYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMK---GLLLLLGAGGG 95 W E +Q WQ V L QL ++ H RR +++ L L+LGAGG Sbjct: 49 WREAEQR----WQMVHRLTPQL------RSAVQPHACDTGRRRLLRQGGALALVLGAGG- 97 Query: 96 WQLWQSETGEGLRADYRTAKGTVSRQ-QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGE 154 W W + + +TA R L DGS L + +S V FD +R V L +G Sbjct: 98 WLGWMFKRTAPFQYGLQTAHAEAPRSLTLPDGSQLLVAAESNLRVHFDHGERRVMLLHGN 157 Query: 155 IAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKR 214 A + L RPF V TR G + LGT FTV + + Q+ V + V+V ++ Sbjct: 158 AFFDVAHE-LWRPFLVSTRLGLVQVLGTAFTVSDRGDRVQVAVARGRVQV--RGLEGGEQ 214 Query: 215 IVNAGESLQFSA-SEFGAVKP---LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLR 270 ++ AGE + + G ++ + W + SF+D+PL EVI L Y + Sbjct: 215 VLQAGERICLDGQGQLGTLRAGGAFGPDLAHWQRGWWSFTDQPLSEVIGELNAYVTRPVA 274 Query: 271 CDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 DP + LRL+G+FP + +L + + LPV++ Sbjct: 275 LDPGASALRLTGSFPSDQPEVLLEALPRVLPVRL 308 >UniRef50_C1DDL2 Anti-sigma factor, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DDL2_AZOVD Length = 323 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 101/322 (31%), Positives = 151/322 (46%), Gaps = 26/322 (8%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ- 59 M P D+ Q SA W L ER + + + W D + AWQ+V L Q Sbjct: 1 MKPPRLDAPTQ---SAVDWTLRLDPERATSEDRQAFAAWLAADSRHVAAWQRVNGLLQQP 57 Query: 60 LGGV-------PG--DVASRALHDTRLT---RRHVMKGLLLLLGAGGGWQLWQSETGEGL 107 L + PG D A RAL DT + RR + LL LG G + + GL Sbjct: 58 LADLQRAEVRSPGQLDAAKRAL-DTPASAQRRRLLGGLSLLALGLSGTAAVDRLAPLHGL 116 Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP 167 AD+ T+ L DG+ L LN ++A DV F+ +R + L GE+ A D L RP Sbjct: 117 LADHHTSTAQRKSVTLADGTQLILNARTALDVHFNDARRRIHLHEGELLAQVAADPL-RP 175 Query: 168 FRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS 227 F ++T QGQ+ A T VRQ+ + + V + + L + +++ G++ F Sbjct: 176 FVIVTAQGQVKASETRLLVRQEAGRSLVSVLRQ--DAWLQQRDGSETLLHPGQAAWFD-- 231 Query: 228 EFGAVKPLDDE---STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTF 284 E G ++P D +W++ L D+PLG +I + Y G+LR PA A +R G F Sbjct: 232 ERG-MRPADASLLTRATWSQGYLESRDEPLGRLIEAMRPYYPGLLRISPAAAEIRTFGIF 290 Query: 285 PLKNTDAILNVIAQTLPVKIQS 306 + + L +A+TLPV++ S Sbjct: 291 QVDDIQQALRSLAETLPVRVTS 312 >UniRef50_Q4K5N6 Sigma factor regulatory protein, FecR/PupR family n=10 Tax=Pseudomonas RepID=Q4K5N6_PSEF5 Length = 337 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 120/227 (52%), Gaps = 12/227 (5%) Query: 87 LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQR 146 +L+L GW L + L+ADY T KG V QL DGS + L++ SA + + +R Sbjct: 102 MLVLAVALGW-LQGPQALLYLQADYLTGKGEVRTVQLADGSQVELDSGSAIRLDYSGDKR 160 Query: 147 TVRLWYGEIAITTAKDA--LQRPFRVLTRQGQLTALGTEFTV-RQQDNFTQLDVQQHAVE 203 V+L G A A +RPF V + GQ ALGT F V R+ + V QH+V Sbjct: 161 QVQLLAGSAVFDVAPMAGEEKRPFIVQSAGGQTRALGTRFVVGRESAQQAWVGVLQHSVA 220 Query: 204 VLLASAPAQK----RIVNAGESLQFSA-SEFGAVKPLD-DESTSWTKDILSFSDKPLGEV 257 V L APAQ+ R++ G+S+++ S A+ LD +TSW + +L F +PLG V Sbjct: 221 VSL-DAPAQRGASERVLQEGQSVRYDPQSGVVALDGLDLQRATSWRRGVLVFDRQPLGLV 279 Query: 258 IATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + L RYR G V+ + A+A ++SG F L DA L + Q L V+ Sbjct: 280 VERLNRYRPGRVVLTNSALAQRQVSGVFRLDMLDAALVTLTQELQVQ 326 >UniRef50_B2HV65 Fe2+-dicitrate sensor, membrane component n=5 Tax=Acinetobacter RepID=B2HV65_ACIBC Length = 338 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 24/330 (7%) Query: 9 RRQALRSASHWYAVLSGE-----RVSPQQEARWQQWYEQDQ----DNQWAWQQVENLRNQ 59 Q + A+HW LS + + + Q+ W++ EQ + D + ++ L Sbjct: 8 HHQLVEEAAHWIVQLSSDDENSRKTAKQKFEEWKKTSEQHRQVAADIEQCIGSIQKLSQT 67 Query: 60 LGGVP-GDVASRALHDTRLTRRHVMKGL---LLLLGAGGGWQLWQSETGEGLRADYRTAK 115 +G VA +A ++ +H+ G ++ + G T + AD + Sbjct: 68 IGHKKVTKVALKAGLNSGKAYKHLRAGTAFAVVFVAMSGALFYLTDTTVAYVTADIQGHS 127 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G + Q L DGS L L +SA ++ F +QR V L G+I + AKD RPF V T G Sbjct: 128 GQWTTQTLPDGSRLILRGKSAVNLDFKTNQRVVELVQGQIYVDVAKDKT-RPFLVKTSHG 186 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP------AQKRIVNAGESLQFSASEF 229 ++ ALGT F+V + T+L++ V+V ++ IV AG++++ + Sbjct: 187 KIQALGTAFSVTYDPSATELNMLHSKVKVEATQVKTTQLHTTRQAIVEAGQAIKMDQNGV 246 Query: 230 GAVKPLD--DESTSWTKDILSFSDKPLGEVIATLTR-YRNGVLRCDPAVAGLRLSGTFPL 286 + L+ +E W K L + PL +V+ L R Y+ ++ D A+ +R++ PL Sbjct: 247 QKLPALNVYNEQQKWQKHQLMVENLPLNQVLQELDRNYKGKIIFNDAALQHVRVNAVLPL 306 Query: 287 KNTDAILNVIAQTLP-VKIQSITRYWINIS 315 T L ++A P +KI+ IT + + +S Sbjct: 307 DQTTESLKLLATVFPDLKIKQITPFVVMVS 336 >UniRef50_B4W7I5 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W7I5_9CAUL Length = 321 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 L AD T G +L+DGS++ +NT SA DV + +RTVRL GE A T A DA QR Sbjct: 114 LHADVLTRPGEQRTVRLDDGSVVQVNTDSAIDVAYAPDRRTVRLLRGEAAFTVAPDA-QR 172 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA 226 PF V G TALGT F VR++ TQ+ V +H V + S V E++ + Sbjct: 173 PFTVEAGGGSATALGTRFVVRRRAAMTQVSVTEHRVRIATRSGS-----VTTPETMTSTY 227 Query: 227 SE---FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSG 282 A P + +WT+ L F D+PL EV+ + RY + AV R+SG Sbjct: 228 RPDQAPSAPTPSSPDVDAWTQGWLVFEDRPLAEVVEEIARYSPTPITVFGRAVRNRRVSG 287 Query: 283 TFPLKNTDAILNVIAQTLPVK 303 F + L + QTL V+ Sbjct: 288 AFGIDQPSRTLARLEQTLGVR 308 >UniRef50_Q82TB4 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82TB4_NITEU Length = 336 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 17/227 (7%) Query: 99 WQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGE--IA 156 WQ + ++DY T G + + D S +TLNT SA V F A +R VRL GE Sbjct: 115 WQQDWVTRWQSDYMTVIGQETSFLMADNSRITLNTDSALAVDFTAERRQVRLLKGEAWFE 174 Query: 157 ITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKR-- 214 +T+A + RPF V T G + GT F +R + + + + VE+ S P Sbjct: 175 VTSADN---RPFIVATSAGSVRVTGTRFNIRLHQDTAIVSLDEGQVEL---STPDHSNNP 228 Query: 215 -----IVNAGESLQFSASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNG- 267 ++ G+ S + P D + T+W ++ L F D PL EV+ TL R+R+G Sbjct: 229 NGSPIVLFPGQQATLSPQGISSPSPFDHTAITAWLRNQLVFYDTPLAEVVDTLNRHRHGR 288 Query: 268 VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 + + + L++SG F D L+V+ TLP+ + +T Y + I Sbjct: 289 IFITNQKLKALKVSGVFSTDEPDTALDVMINTLPIHLLRLTDYLVLI 335 >UniRef50_B3PLQ9 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PLQ9_CELJU Length = 322 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 100/330 (30%), Positives = 155/330 (46%), Gaps = 42/330 (12%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL-RNQLGGV 63 +TD++ ASHW+A++ VS Q+ +QQWY D ++ A+ +++L R+ + Sbjct: 1 MTDTQIAIDEQASHWFALMLEPPVSASQQQAFQQWYNSDPRHRQAYSALQSLWRDSAVAL 60 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGG-----GW---QLWQSETGEG--------- 106 A+ DT + + GAGG W + WQ+ TG Sbjct: 61 AVPAAN---DDTSIG----------VSGAGGRRLSQAWYRQRPWQALTGLAACLFLAVVL 107 Query: 107 ----LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD 162 + ADYRT G L DGS LN+ SA V + +R + + G++ A + Sbjct: 108 WPFSISADYRTGIGQQQVVLLPDGSRAHLNSDSALAVHYSDKERRLEVLSGDVWFDVAPN 167 Query: 163 ALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESL 222 QRPFRV+ G+ ALGT F V Q + V +H V V L +RI+NAGE L Sbjct: 168 P-QRPFRVMAAGGETVALGTAFAVSLQPRGADVVVTEHQVRVSLEGDSQNQRILNAGEGL 226 Query: 223 QFSASEFGAVKPLDDES--TSWTKDILSFSDKPLGEVIATLTRYRNG--VLRCDPAVAGL 278 + A F A+ + DES SW L F ++PL EV+A L + G VL D ++A Sbjct: 227 SYRAGSFSAIG-VADESLLLSWRNQQLVFLNQPLIEVMAILEHWHPGKLVLLGD-SLAQH 284 Query: 279 RLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 +++ + + +L+ + Q L +K S+ Sbjct: 285 QVTLILDTRQPEQLLDKLVQGLNLKTFSVA 314 >UniRef50_C6X7E8 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7E8_METSD Length = 335 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 27/322 (8%) Query: 5 LTDSRRQALRSAS-HWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + +R LR A+ W+ L + + ++++QW Q +Q A++QV L + Sbjct: 1 MAANREHQLRQAAIRWFVRLQTAAMDDPERSKFEQWLLASQAHQQAYEQVATLWERFDSA 60 Query: 64 P-----GDVASRALHDTRLTRR--------HVMKGLLLLLGAGGGWQLWQS-ETGEGLRA 109 P D + + + R V+ +L+ G G+Q ++ + L+A Sbjct: 61 PALENLADAMEQQAYFKKPQRNGRIKKTVAGVLSAAVLVFGLTHGYQEYERWQAAPVLQA 120 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 + G +SRQ+L+DGS LTLN+ S A+V F +R V L GE A+D RPF Sbjct: 121 VAQAGFGQISRQRLQDGSELTLNSGSDAEVTFYRDRREVHLKRGEAIFDVARDP-DRPFI 179 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 VL+ ++T GT F V + ++ V V+V + A + GE + Sbjct: 180 VLSGNARVTVYGTRFAVNRLQRLVRISVDHGLVKVEPQNTTASPLWLRKGEVAEVP---- 235 Query: 230 GAVKPLDD-----ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV--AGLRLSG 282 A PL ++ S+T+ ++SF L E++ TL+RYR L+ A+ + +++ Sbjct: 236 NAAAPLRSSHQAADAFSFTQGMISFDHADLSEIVETLSRYRRPPLQLQAALQHSPAQVTA 295 Query: 283 TFPLKNTDAILNVIAQTLPVKI 304 +N + ++ + Q PV+I Sbjct: 296 VIKTRNIEKFISQLPQLAPVRI 317 >UniRef50_A9C118 Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C118_DELAS Length = 375 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 114/242 (47%), Gaps = 15/242 (6%) Query: 75 TRLTRRHVMKGLL----LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 +RL +R + L L L G GW WQ + + + T +G L DG+ L+ Sbjct: 123 SRLLQRPALAALCCTVALALAVGVGWHQWQQQ--PTFTSSHLTPRGQARTITLPDGTALS 180 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR--- 187 L+ + A V +R VR+ G+I A D+ RPF VL ++T GT F+VR Sbjct: 181 LDADTQAQVTLYRDRREVRITQGQILFAVAPDS-DRPFHVLAGPARVTVGGTRFSVRYRA 239 Query: 188 --QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS-ASEFGAVKPLDDESTS-WT 243 + Q+ VQ+ V V A A + AG++L S A G V + S + W Sbjct: 240 TGMEAGSAQVAVQEGHVRVAGAQGAATPADLVAGQALSVSPAGVLGPVAAVAPGSIALWR 299 Query: 244 KDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 K ++ F + PL + +A L RY G++ DPAVA LR+ GT+ ++ Q LPV Sbjct: 300 KGLIRFENTPLADALAELERYGPTGLVVHDPAVAALRIGGTYQTSRPAEFARMLVQILPV 359 Query: 303 KI 304 + Sbjct: 360 TL 361 >UniRef50_Q0AEB9 Putative FecR n=2 Tax=Nitrosomonas RepID=Q0AEB9_NITEC Length = 320 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 23/308 (7%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 Q L+ A W+ +L E + + + ++ +W+ +++ +Q A+ E L ++ + Sbjct: 10 QLLKQALKWFFLLQSEHCTDEDKRKFNRWFCKNEAHQAAYTHAERLWSETDKLKETPDIP 69 Query: 71 ALHDTRLTR-RHVMKG-----LLLLLGAG---GGWQLWQSETGEGLRADYRTAKGTVSRQ 121 LH+ R R +H G L L+ + W + +ET Y T G Sbjct: 70 GLHEARRRRPKHQPAGIFGWALFFLISSALMSISWLEYNAET-----VTYSTRLGEQRLI 124 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 L DGS + +NT + VR QR + L GE A + RPF V T + Q+ +G Sbjct: 125 SLADGSRINMNTATRLHVRISYLQRKITLDAGEAVFDVAHETW-RPFVVHTDKLQIQDIG 183 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES-T 240 T+F V +Q + + V + AVE+ R+ + S S+ ++P+D E Sbjct: 184 TQFNVHRQQDEISVTVLEGAVEI------DGVRLDEGYQQYYSSRSDHAVLRPVDTEQIA 237 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W L F PL V L RY + DPA+A LSGTF ++ L+ + + Sbjct: 238 AWQHGRLIFRQTPLAAVTTELERYHPVHFIFTDPAIAHETLSGTFGTRDLPLFLSSLEKA 297 Query: 300 LPVKIQSI 307 LPV+++ + Sbjct: 298 LPVRVKKL 305 >UniRef50_Q82WU9 Putative transcriptional regulator, putative n=1 Tax=Nitrosomonas europaea RepID=Q82WU9_NITEU Length = 343 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 33/322 (10%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 D R + + A W+ + + V+ + A + W + +N A+ E L ++L + G Sbjct: 20 DDRNHSGKEALDWFVRMQSDSVTEAERAAFIAWRDAKPENAQAYADTELLSHKLAALKG- 78 Query: 67 VASRALHDTRLTR------------RHVMKGLLLLLGAGGGWQLWQSETGEGLRAD-YRT 113 A H RLT + LL++ + G W WQ+ G+ +D Y T Sbjct: 79 --HSAYHIPRLTPDQKPSLMTMQSFNRIALFLLIIFSSAGLW--WQT----GIVSDEYVT 130 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 + G LEDGS L LNT S ADVR+ +R V L+ GE A + +R F VL Sbjct: 131 SAGEQRHIPLEDGSKLELNTASHADVRYTRLERIVTLYSGEAYFDIADENYRR-FVVLAG 189 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS-------APAQKRIVNAGESLQFSA 226 Q+ +GT F VR + + V + VE+ + PA ++ AG+ + Sbjct: 190 GLQVRDIGTRFIVRHDNEQVTVTVLEGEVELTRPALSDRSGELPATLTLL-AGQQSHYRN 248 Query: 227 SEFGAVKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTF 284 + P+D + +W + L F PL EV+ L RY + DPA+A ++G+F Sbjct: 249 EVITSAIPIDSVAAAAWREGKLIFKATPLREVVQELARYHPLRFVIHDPALADETVTGSF 308 Query: 285 PLKNTDAILNVIAQTLPVKIQS 306 + + L + Q L ++I + Sbjct: 309 HIGELSSFLRALEQVLQIQIDT 330 >UniRef50_Q3SN47 FecR protein n=2 Tax=Nitrobacter RepID=Q3SN47_NITWN Length = 318 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 80/306 (26%), Positives = 140/306 (45%), Gaps = 10/306 (3%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 + A+ W+A + + S + W D + A+ ++ L +PG Sbjct: 19 VEEAAVWFATMHDGKPSAADTKALKAWLAADPRHVRAYADIDRLWTGAIELPGMKDRHRA 78 Query: 73 HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLN 132 +TRR + +++ G W+ S ADYRTA G L DGS + L Sbjct: 79 ARKAVTRRRFGEAVVIGAVGLGAWRYLASHP----FADYRTATGERRTVNLADGSTVDLA 134 Query: 133 TQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF 192 ++ + F +R + L GE T AKDA RPF V +G+ TALGT F V +D+ Sbjct: 135 AETKLSLAFTRERRGLTLHEGEAFFTVAKDA-GRPFVVEAGEGRTTALGTAFGVDYRDDS 193 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST-SWTKDILSFSD 251 + V V+V L A+ V+AG + + + G ++ + + +W + L F+ Sbjct: 194 ATVIVTDSTVDVALGEESAR---VSAGSLVTYDSRHIGELRQSETGTELAWREGRLVFTQ 250 Query: 252 KPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 PLG+ + L R+R+G ++ ++A ++ L T+ I+ +A+ +P++I + T Y Sbjct: 251 APLGQAVQALNRWRSGRIVVMSTSLAQRPITLIVNLNRTETIVAQLAEEVPIRIVAATPY 310 Query: 311 WINISP 316 + P Sbjct: 311 LTLLFP 316 >UniRef50_A6X2N0 Anti-FecI sigma factor, FecR n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X2N0_OCHA4 Length = 314 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/295 (28%), Positives = 134/295 (45%), Gaps = 12/295 (4%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG--DVASRALH 73 A W+ +L + VS + W D ++ A+++ + L + V D ++ H Sbjct: 13 ALEWFVLLQDKTVSADDRRAFSAWIASDPAHRVAYERAQTLWQRFDAVKPEYDRIRQSGH 72 Query: 74 --DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTL 131 D R+ RR V+ G L L G L GL A Y+T G L DGS + L Sbjct: 73 KSDGRVGRRGVVLGGLAALVLLPGAYLLSRP---GLFATYQTGVGERRSFTLADGSTVEL 129 Query: 132 NTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDN 191 + SA + F + R + L G+ A D RPF V G +TALGT F V+ D Sbjct: 130 GSYSALSLDFSGNGRNLVLHEGQGFFQVASDP-SRPFVVSANGGTITALGTAFDVKLIDR 188 Query: 192 FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST-SWTKDILSFS 250 + V +HAV V + + ++ G + + E + D ++ +W D + F Sbjct: 189 AVTVSVVEHAVSVAFGQSDPVR--LDEGWQITYGGDEAALPQRADPQTVEAWRNDRIIFE 246 Query: 251 DKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 D PL V++ L RYR G + D + + ++ F ++ +A L IA+TLPV++ Sbjct: 247 DVPLSRVLSELERYRRGRIFLTDTEIGNMPVTAIFDTRDAEAALATIAETLPVRV 301 >UniRef50_C6XBX5 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBX5_METSD Length = 331 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 88/315 (27%), Positives = 138/315 (43%), Gaps = 23/315 (7%) Query: 19 WYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH--DTR 76 W L+ + + + + QW + ++ AWQ+++ L L +P + A++ D Sbjct: 18 WSVKLASGQATERDYEDFHQWRASNPAHEQAWQKLQALEANLVNMPETAKTLAINTLDAA 77 Query: 77 LTRRHVMKG---LLLLLGAG-----GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 +R V G L LLG G G L +Y G + L DG+ Sbjct: 78 SRQRAVHHGRRKALKLLGIGLVLVTSGACFLNDHGPWALETEYAVPIGKKMQLDLADGTR 137 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA----LQRPFRVLTRQGQLTALGTEF 184 L LNT + V + +R + L GEI I T D+ R F V T L ALGT+F Sbjct: 138 LMLNTNTRIKVHYSLLKREIVLTSGEIYIATGSDSEGPWAHRSFWVQTPNASLEALGTQF 197 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD--ESTSW 242 T Q T+L H +E +A AQ V+AGES A+ +K D + T W Sbjct: 198 TADQNKQRTRL----HVIESAVAIHGAQTLNVHAGESYDIYAANQDPIKTADTHFDPTGW 253 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPL-KNTDAI--LNVIAQT 299 +L L + L+RY+ ++ D VA + +SG F L + A+ L +A++ Sbjct: 254 MDGVLVAKGMRLDNFASELSRYQAVHIQMDSEVAAMTVSGVFQLNQQYPAVHALRAVARS 313 Query: 300 LPVKIQSITRYWINI 314 LP+K+ ++ + I Sbjct: 314 LPIKLSPLSATQLQI 328 >UniRef50_B0KMD4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KMD4_PSEPG Length = 309 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 92/299 (30%), Positives = 136/299 (45%), Gaps = 15/299 (5%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R+A W L+ V P + W Q ++Q A+ VE R L + G + + A Sbjct: 16 RAAQAWVVRLTSGDVRPGDVEAARAWCAQAPEHQQAF--VEARR--LWALSGQLQAPARR 71 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 + + +L+LG G W + G ADYRT G L DGS ++L+ Sbjct: 72 RAPARQWALASAAVLVLGVGVALA-WHGQWG----ADYRTGVGERRVVTLSDGSRISLDA 126 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFT 193 +SA DV + R + L GE A D RPF V Q TALGT + V ++ Sbjct: 127 ESAVDVEMNDRARRITLRKGEAVFEVAHDP-ARPFTVQAGAVQATALGTVYAVSREGASV 185 Query: 194 QLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWTKDILSFSDK 252 + V++ V V S A + ++AGE++ A G LD D + +W + L F Sbjct: 186 GVVVKRGRVAV---SDTADRVELSAGEAVGREAGRLGGKHGLDVDSALAWQQGRLVFEQA 242 Query: 253 PLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 PL +V+ L RYR G +L D + GL++SGTF L D L + Q P+ I + + Sbjct: 243 PLAQVLKALERYRPGWLLIGDEQLRGLKVSGTFQLDRLDEGLATLEQAFPLSIHRYSDF 301 >UniRef50_B0U8Q5 Anti-FecI sigma factor, FecR n=1 Tax=Methylobacterium sp. 4-46 RepID=B0U8Q5_METS4 Length = 327 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 90/320 (28%), Positives = 145/320 (45%), Gaps = 25/320 (7%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 Q + +A W LS V+ +Q ++ W D ++ AW L+ L +P VA+R Sbjct: 10 QPVEAAIGWMVELSSGAVTERQRRAFEAWLAADPGHEAAWL---GLQESL--MPCGVAAR 64 Query: 71 A-LHDTRLT---------RRHVMKGLLLLLGAGGGWQLWQSE--TGEGLRADYRTAKGTV 118 L RLT RR V+ G+ LG G L +GL AD+ T Sbjct: 65 QRLPPGRLTQRLLARQPNRRAVLTGVAAALGLGAAGSLVADRFVPLDGLLADHVTRTAEQ 124 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +R +L+DGS + L ++A DV + +R +RL GE+ + A A PFR+ LT Sbjct: 125 NRLRLDDGSEVVLAPRTAIDVDYALGRRAIRLIEGEVLVRVA--ARSAPFRLDAGVLNLT 182 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG--AVKPLD 236 A F V ++ Q +++ + + GE L AV ++ Sbjct: 183 AESGSFLVEKRAEVLAATGLQGTGRLVVGA---AAAAIGRGERLGLEDGRLRRQAVDEVE 239 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 D T+W +L ++ + ++ L Y GV+R DPAVA +R +G FPL++ L+++ Sbjct: 240 D-VTAWLDGVLVAKNRSVASIVRALRPYFPGVIRVDPAVAEIRATGVFPLRHPGEALDIL 298 Query: 297 AQTLPVKIQSITRYWINISP 316 +L + I + YW+ I P Sbjct: 299 GASLGLSITRVAHYWVAIGP 318 >UniRef50_B9K518 Two component sensor kinase n=1 Tax=Agrobacterium vitis S4 RepID=B9K518_AGRVS Length = 319 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 82/304 (26%), Positives = 138/304 (45%), Gaps = 16/304 (5%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV-- 63 +DSR++ R A+ W SP A ++ W ++D +N + E + G Sbjct: 7 SDSRKRRNREAADWLLRNGDPNQSPDDRALFETWLKRDPENCRTYSAAEFVMGDAGRAIQ 66 Query: 64 --PGDVASRALHDTRLTRRHVMKGLL--LLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 PG L D + R++ K ++ LL+ A + + ++AD Sbjct: 67 SDPG------LADIDMRPRNMAKPIIATLLVAALATGAFFAFDGPLRMQADMIAGTDETP 120 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 + LEDGS++ LN SA V F R +RL G+ A A RPF V+ + ++ A Sbjct: 121 IRTLEDGSIVQLNASSAIAVDFTGGHRVIRLLRGQAFFQVAH-APDRPFTVVAGETKVIA 179 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS-ASEFGAVKPLDD- 237 LGT F VR T++ V ++AV++ A VN GE + A + AV P+D Sbjct: 180 LGTAFDVRYGKEDTEVTVTENAVQLERDGKQAASLRVNEGEQAIYDYARKTTAVTPVDGL 239 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTR-YRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + +W + ++ + PL V+ + R +R ++ A+A R+SGT + +T L + Sbjct: 240 VALAWRRGQIAVDNAPLSYVVEEMNRHFRGRIIIAGSALARRRVSGTIKVADTKDALAFV 299 Query: 297 AQTL 300 + L Sbjct: 300 KKAL 303 >UniRef50_Q3SNK9 FecR protein n=2 Tax=Nitrobacter RepID=Q3SNK9_NITWN Length = 334 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 3/194 (1%) Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 L+ADY TA G L DGS LTLNT SA + F QR VR+ GE A + L Sbjct: 125 LQADYVTAAGEQRLVTLPDGSRLTLNTGSAVALDFANGQRDVRVLKGE-AYFDVRSGLPI 183 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA 226 PFRV G + GT F+V+ D+ + + + VEV + P + ++ GE++ +A Sbjct: 184 PFRVAGHFGDVEVKGTAFSVKLDDSEDNVVLSRGVVEVANRAHPREHASLSPGETVSVTA 243 Query: 227 SEFGAVKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTF 284 + V+ +D E S +W + + F D+P GEV+ L RY G + A+ + +SG + Sbjct: 244 TSISPVRKIDAERSLAWLEGRIRFDDRPFGEVLNDLRRYYPGRIFVATSAIEQVSVSGNY 303 Query: 285 PLKNTDAILNVIAQ 298 L ++ +A+ Sbjct: 304 KLDQPLLVIQSLAE 317 >UniRef50_Q82W78 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82W78_NITEU Length = 334 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 144/328 (43%), Gaps = 32/328 (9%) Query: 1 MNPLLTDSRRQALRSASHWYA-VLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 MN +D +A++W+A V SG QEA + W + D N+ +Q ++ + Sbjct: 1 MNRKHSDIPAHPRDAAAYWFARVHSGSFTQSDQEA-FDSWLQADDLNRKEYQALDKIWQV 59 Query: 60 LGGV--------------PGDVASRALHDTRLTRRHVMKGLLLLLGAGG-----GWQLWQ 100 G + P + L RLT V +++++G G GW Sbjct: 60 AGQISAHELRAMLAEEPEPPQQIQKRLKRWRLTISAVAATIIIVIGFAGLFMPYGW---- 115 Query: 101 SETGEGLR-ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITT 159 GE A+Y T +G + L DGS+L +NTQ+ A V + ++R VRL GEI + Sbjct: 116 --LGEPFYTAEYVTDRGERRTEVLPDGSILEINTQTTALVEYFENRRNVRLAGGEIMFSV 173 Query: 160 AKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS-APAQKRIVNA 218 DA RPF V G + GT F V + + Q+ V+ +VE+ + + Sbjct: 174 ETDA-ARPFTVDAGSGTVLVTGTRFNVLRDQDQVQIAVESGSVEISSGHWWNRRTEQLTD 232 Query: 219 GESLQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVA 276 G Q P D D T+W + + F D+PL V+ + RY + D + Sbjct: 233 GLGAQIDPDSMTPASPADIDTLTAWRQGKIIFKDQPLASVVKEMNRYLPQPITITDHRLD 292 Query: 277 GLRLSGTFPLKNTDAILNVIAQTLPVKI 304 +R++G F ++ A L + +++PV++ Sbjct: 293 QVRIAGVFNTGDSAAFLQALHKSIPVQV 320 >UniRef50_Q2RRS2 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRS2_RHORT Length = 329 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 3/199 (1%) Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP 167 RADY TA G R L DGS + LNT SA + F +R + L GE DA P Sbjct: 121 RADYLTATGERERVTLPDGSTMILNTASAVALDFAKGERAITLLAGEAFFDVRHDA-DHP 179 Query: 168 FRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS 227 F V R G++ GT F+V +D+ ++ +++ AV V A Q ++ GE++ +A+ Sbjct: 180 FTVTGRFGEVRVEGTAFSVEMKDDRDEIVLERGAVAVRCVGASGQAAALHPGEAVSVTAT 239 Query: 228 EFGAV-KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFP 285 V + + +W + F ++PLG V+ L RY G + + A G +SG + Sbjct: 240 ALSPVRRAAPEHDLAWRNGRIRFDERPLGAVVEDLRRYHKGPIFVLNDAAEGTVVSGNYR 299 Query: 286 LKNTDAILNVIAQTLPVKI 304 L + L +A ++ Sbjct: 300 LDDIAGALRTLAAATGAEV 318 >UniRef50_Q1LPC1 Putative FecR n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LPC1_RALME Length = 357 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 105/234 (44%), Gaps = 20/234 (8%) Query: 93 GGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWY 152 G GW WQ + A+Y+TA G L+DGS + LNT+S ++ + A R V L Sbjct: 115 GIGWIGWQHDAAVATNAEYQTAPGERRTLTLDDGSRIELNTRSRLEIHYSAGTRRVTLRE 174 Query: 153 GEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEV-------L 205 GE + DA RPF V G +T GT F VR+ + + V+ +V+V + Sbjct: 175 GEAMFEVSHDA-ARPFVVDAGMGTVTVTGTRFDVRRDTSGVDVSVESGSVDVRGSVRGSV 233 Query: 206 LASA-----------PAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPL 254 SA P + G + + GA +W + L F+D PL Sbjct: 234 RGSAKDSVKGNAGRTPDTRLSAGLGARIASDGTVTGAASIDLPGVLAWREGKLVFNDAPL 293 Query: 255 GEVIATLTRYRNGVLR-CDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 V A ++RYR +R D A LR+S F +T +L + Q LPV ++++ Sbjct: 294 SAVAAEVSRYRQQPVRVADAATGSLRVSSVFSADDTSGLLAALPQMLPVGVRNL 347 >UniRef50_Q3SQY3 Probable FecR, iron siderophore sensor protein n=3 Tax=Rhizobiales RepID=Q3SQY3_NITWN Length = 329 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 91/304 (29%), Positives = 136/304 (44%), Gaps = 27/304 (8%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA---SRA 71 +A W L + + A + W Q +++ A ++ E + + +G V GD A R Sbjct: 29 AAIDWLVRLKSGQATNDDHAAFAAWRGQSMEHELAAREAEAVWHGVG-VAGDRARTLERK 87 Query: 72 LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSET-GEGLRADYRTAKGTVSRQQLEDGSLLT 130 ++TRR V+ G L A G+ L S G AD+ T G L DGS + Sbjct: 88 ERRAKVTRRAVLGGGTL---AVAGFVLAGSGVIGPRAFADHVTGVGEQRTVGLADGSSVF 144 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF--TVRQ 188 LN S V+F AH+R + L G+ T A D RPF V GQ A+GT F +R Sbjct: 145 LNASSGFSVKFSAHERRLSLLEGQATFTVAHDT-ARPFIVEAGDGQTRAVGTVFDIDIRA 203 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES------TSW 242 + + A+ + P R+ L +P ES T+W Sbjct: 204 GEVVVTVVEGVVAITTDQSPDPVVARVDQRVRYLPRG-------RPSGPESADAYIETAW 256 Query: 243 TKDILSFSDKPLGEVIATLTRYRNG--VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 + L F+ +PL +V+A + RYR G VL D + L ++G F L + +AIL+ I TL Sbjct: 257 RRGKLIFNRRPLADVVADIERYRRGRIVLMGD-GLRSLEVTGVFDLNDPEAILHTIEDTL 315 Query: 301 PVKI 304 PV++ Sbjct: 316 PVQM 319 >UniRef50_Q15VP5 Putative FecR n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VP5_PSEA6 Length = 336 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 13/212 (6%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y TA G +S L DGS +TLNT SA + F QR V L GE AKD R F + Sbjct: 119 YHTAIGEISTVGLPDGSAVTLNTDSAIRINFTGQQRRVWLERGEAFFDVAKDE-SRIFSI 177 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI-VNAGESLQFSAS-- 227 T + + +GT+F VR+ D ++ V + V + ++ + + I E+L + S Sbjct: 178 NTGEKTIRVIGTKFNVRKSDATLKVSVTEGLVAIQPSALASSEHIDFEEAETLLPAGSVG 237 Query: 228 EFGAVKPLDDESTS--------WTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGL 278 F + TS W + I F+++PL VI RYR + + + L Sbjct: 238 AFNGTSEVITHVTSKEVLANQQWRQGIFRFNNEPLANVITEFNRYRLKKITLQNRDLGKL 297 Query: 279 RLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 ++SG F LK+ D+IL+ + LPV+I Y Sbjct: 298 KISGVFKLKDGDSILSALEAALPVEIDRYPEY 329 >UniRef50_D0Y1A0 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y1A0_9CAUL Length = 331 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 85/309 (27%), Positives = 133/309 (43%), Gaps = 21/309 (6%) Query: 5 LTDSRRQALR---SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + D R++ LR A+ W+ +LS V + R+ +W ++D N+ A++++E++ G Sbjct: 1 MIDDRQKTLRQDKEAAAWFTLLSDTEVETEALERFDKWIQRD-GNRAAYRRIEDISTAAG 59 Query: 62 GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRAD----------- 110 + D RA L RR L G +LW G+ A Sbjct: 60 DLRDDPEMRAAAREALGRRKPRASASSLFRLGPP-RLWGGLALAGVIASAVLFATLTRPK 118 Query: 111 -YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 Y TA G QL DGS + LNT +A V+F +R + L G+ A D RPF Sbjct: 119 TYETAVGGRMTAQLSDGSTVQLNTDTALRVKFSHGERRLELVRGQAFFNVAHDP-ARPFL 177 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF--SAS 227 V ++ ALGT F VR + + Q V V + Q ++ G+ L Sbjct: 178 VRAGAMEVRALGTRFDVRHDSADASVALAQGQVRVRQRTGQRQAWTLSPGQGLTVLSDGR 237 Query: 228 EFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AGLRLSGTFPL 286 G + T WT++I++F D LG+ +A + RY + P V A +LSG F Sbjct: 238 STGPARIDVAALTGWTRNIITFHDIALGDAVAEMNRYDRAKITLAPGVPAHAKLSGVFTT 297 Query: 287 KNTDAILNV 295 + + L+ Sbjct: 298 GDQEEFLDA 306 >UniRef50_C5SQ91 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQ91_9CAUL Length = 325 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 88/303 (29%), Positives = 134/303 (44%), Gaps = 20/303 (6%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDN-------QWAWQQVENLRNQLGGVPGD 66 R A+ W L + PQ EA++ W D + + AW+Q E LR + G Sbjct: 18 REAAEWLVKLEEGPLDPQTEAQFAVWLSADPAHAAALSRAREAWRQAEALRPGREALMGR 77 Query: 67 --VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 ++ L R + LL G ++ S T AD RT G V +L Sbjct: 78 QVYGAQVLEPVLSAMRQPLAAAACLLLGISGMAIYGSVTA----ADLRTGPGEVRTFRLA 133 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTA--KDALQRPFRVLTRQGQLTALGT 182 DGS LTL+ SA D+ F+ R + L G + A + A RPF V+ R G+ ALGT Sbjct: 134 DGSQLTLDGNSAVDLAFNTGTRRIALRKGAAYVIAAPRQGAETRPFVVVARGGESQALGT 193 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-ESTS 241 EF V D ++ V +H V V S + ++ G+S+ + + AV+ ++ + Sbjct: 194 EFAVEYLDTGVRVTVTEHLVRV---SHDHGQAVLAEGQSVIYGLEGWQAVQTAPSLQAAT 250 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLR-CDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W + F PL +V+A L RYR L +A R+SG F ++ L+ I L Sbjct: 251 WRDGRMVFDRAPLKDVVAQLNRYRRDRLYIAGTGLAERRVSGVFDTRDPQNALSSITTGL 310 Query: 301 PVK 303 ++ Sbjct: 311 KLR 313 >UniRef50_B8L287 Anti-FecI sigma factor, FecR n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L287_9GAMM Length = 384 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 16/226 (7%) Query: 96 WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEI 155 W WQ + TA+G +R +L DGS L L+T + ADV R VRL G++ Sbjct: 155 WNAWQR--APIFEQSFATARGEQTRVELPDGSTLWLDTATRADVSLYRTHREVRLSTGQV 212 Query: 156 AITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF------TQLDVQQHAVEVLLASA 209 D + PF VL ++T +GT F+VR+ + + V+Q V V A Sbjct: 213 FFAVHPD-REHPFNVLVANTRVTVVGTRFSVRRTGSALGGSGEVSVAVEQGHVRVAKAQD 271 Query: 210 PAQKRIVN---AGESLQFSASEFGAVKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYR 265 A++ AG+S+ A G P+ E TSW +SFS L + +A RY Sbjct: 272 MAEQGAAVDLLAGQSVIVGAG--GKPGPVGSEVDTSWRDGRISFSGTRLDQALAEFERYG 329 Query: 266 N-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 + G++ DPAVA L++ G+F L+ A + Q LPV++ + R+ Sbjct: 330 DTGLVIHDPAVAALKVQGSFNLRRAGAFARALPQVLPVRLDARGRH 375 >UniRef50_C7JHQ2 Two component sensor histidine kinase FecR/PupR n=8 Tax=Acetobacter pasteurianus RepID=C7JHQ2_ACEP3 Length = 341 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/319 (27%), Positives = 134/319 (42%), Gaps = 18/319 (5%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD-- 66 R+QA R A+ W +L E P+ A ++ W N+ AW Q + + + D Sbjct: 26 RQQASREATQWLILLQEEPDDPEVRAGFEAWLGAAPVNREAWAQTQTAMGLVNYLSPDNT 85 Query: 67 ---------VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 + L R + R G L L A + ++AD T Sbjct: 86 GNWQQKKRNIVPLPLRH-RFSSRATRAGFALALVACLALFFAGPDFMLHMQADAITGTAE 144 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 L DGS +TL SA + R+V L GE + D RPF V Sbjct: 145 TRVLSLSDGSSITLAPGSAVSINTQGIHRSVSLLAGEALFSIVHDP-ARPFAVKAGGFTT 203 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 T +GT F V+ + V+ V V + PAQ R + G++L SA+E + Sbjct: 204 TDIGTVFDVQWAQGAVNVAVRTGRVRVNGGAIPAQGRELGTGQALTASATEVYNNNLPAE 263 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W +L +D+PLGEV+A L Y +G++ P +A R+SG + L N L IA Sbjct: 264 QVGAWADGLLVANDEPLGEVVAKLKPYLHGMVIVSPHLALQRVSGVYSLSNPARALEAIA 323 Query: 298 QTLPVKIQSITRY--WINI 314 Q + +++ RY W+ + Sbjct: 324 QA---RQRTVRRYSPWLTV 339 >UniRef50_B0SXJ1 Anti-FecI sigma factor, FecR n=2 Tax=Caulobacter RepID=B0SXJ1_CAUSK Length = 342 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 141/307 (45%), Gaps = 29/307 (9%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL-- 72 +A+ W+A L G+ V + +++W D N AW + + + ++L + D A AL Sbjct: 17 AATTWFARLQGDAVLVEDRRAFERWLGADARNAAAWDRCKGVWDRLSLLDSDPALAALRA 76 Query: 73 --------HDTRLTRRHVM--KGLLLLLGAGGG--WQLW-----QSETGEGLRADYRTAK 115 +RL+RR ++ G++ ++G+G W+L S + + TA Sbjct: 77 DALGASDASSSRLSRRGLLTAAGVVAMVGSGAAVAWRLMPKGASSSTSTASADPTFTTAV 136 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G +S L DGS++TL+T SA V +R + L G+ AKDA RPF V Sbjct: 137 GELSTFHLADGSVVTLSTDSAVKVDPWNRERRLSLLRGQAFFKVAKDA-ARPFVVAVGDK 195 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE-----FG 230 +TA+GT F VR + + + V + +P R+V +F A++ Sbjct: 196 LVTAVGTAFDVRLDPGKLSVTLLEGRVRI-AGPSPRGDRMVEMSAGSKFVAADAADWNIA 254 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNT 289 AV + + +SW + L F +PL V+A + R+ LR DP VA +SG F Sbjct: 255 AVDAV--KESSWLQGRLVFDGEPLSAVVAEMNRFSTRKLRVSDPRVAATPVSGVFKTGQV 312 Query: 290 DAILNVI 296 DA + I Sbjct: 313 DAFVAAI 319 >UniRef50_C1DE50 Anti-sigma factor protein, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DE50_AZOVD Length = 264 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 16/230 (6%) Query: 80 RHVMKGLLLLLGAGGGWQL---WQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSA 136 R GL +LL AG W L W++E D RTA G +L DGS LNT S Sbjct: 32 RLAAGGLSMLLLAGAVWMLDPAWRTE-------DIRTAVGERGTIRLADGSEAILNTGSH 84 Query: 137 ADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLD 196 V R + L GE + A + +PF V ++ ++ +GT FTVR + Sbjct: 85 LRVESRLRSRRLELVRGEAGFSVAHAS--KPFIVRSQGVEVRDIGTVFTVRSDGRGVLVS 142 Query: 197 VQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLG 255 V + VEV P ++ + G+ ++ GA + +D D T+W + L F PLG Sbjct: 143 VVEGTVEVSGRQTPVRR--LETGQQVRAGREGIGATRRIDPDAVTAWQRGKLRFDGTPLG 200 Query: 256 EVIATLTRYRNGVLRCDPA-VAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 E I + RYR +R A +A LRLSG + +++++++ LPV + Sbjct: 201 EAIVDIQRYRQAPVRLGEARLASLRLSGEYDTDAIESLIDLLPAILPVSL 250 >UniRef50_B7VA09 Probable transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=B7VA09_PSEA8 Length = 318 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 111/257 (43%), Gaps = 6/257 (2%) Query: 62 GVPGDVASRALHDTRLTRRHV--MKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 G P RAL RR V GL +LL G G + W + G GL + T G Sbjct: 65 GQPSATVLRALEQPSSRRRFVGGALGLFVLLAGGAGLERW-VQAGMGLPGELATGTGERR 123 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L DGS L LN +S A D QR + L G + + +D + F + G++ Sbjct: 124 DWLLADGSRLRLNARSKARPLLDGAQRRLELRRGAMRLEVKEDP-RGAFALDCAAGRVDC 182 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 + ++ +L + + L + ++ V A SL F A P+ Sbjct: 183 ASGSLLLAEERGAIRLVTLRGSAR--LTTGEGRQLAVAARRSLLFDAGGLLEQGPMQAGE 240 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W L D+ L V Y G+L+ D +AG R+SG FPL + L+++ ++ Sbjct: 241 DAWASGWLEVHDRSLAWVAEAFRPYLPGILQLDAEIAGNRVSGLFPLDDMHTSLDMLGRS 300 Query: 300 LPVKIQSITRYWINISP 316 LP+++ + YWI++ P Sbjct: 301 LPIRVLRYSDYWISLRP 317 >UniRef50_A5W6B0 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonas putida RepID=A5W6B0_PSEP1 Length = 374 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 108/230 (46%), Gaps = 32/230 (13%) Query: 76 RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQS 135 RL + V ++LL+ A GWQ L ADY TA G L DG+ +TLN+ S Sbjct: 166 RLKQAGVAASVVLLVAAVAGWQ-----QAPMLLADYHTAVGERQVITLTDGTRVTLNSAS 220 Query: 136 AADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQL 195 A V F H+R V L GE TA D+ RPF V T ++ F+V Q+D Sbjct: 221 ALSVVFSEHERRVVLDAGEALFETADDS--RPFVVETAGARVQGNAATFSV-QRDG---- 273 Query: 196 DVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLG 255 V+LA A+ GE A++ G +W + L F+ KPLG Sbjct: 274 -------HVVLARGEAK-----VGEHELAVAADAGT-------QMAWQRGKLIFNGKPLG 314 Query: 256 EVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 +V+ L RYR+G ++ D +A + +SG F L +A+L + Q +K+ Sbjct: 315 QVLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKV 364 >UniRef50_A8EWQ5 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWQ5_ARCB4 Length = 318 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 74/308 (24%), Positives = 142/308 (46%), Gaps = 27/308 (8%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD----VASRA 71 A HW A E ++ +QE ++ W ++D+++Q A+++ + + +P + ++ A Sbjct: 9 AIHWVAC-KKEGLTFEQEKEFEIWLKEDEEHQKAFEEANLVYSIFQNIPKNHTQTLSKNA 67 Query: 72 LHDTRLTR--RHVMKGLL----LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 L + + + +K + +L G G++ + E DY+T ++ ++ L D Sbjct: 68 LKEAKKIKFIEKTVKPFIGMAAILCGLFIGYKFFIPE----YEKDYKTQFSSLKQEILPD 123 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 GS L+++T+S + + +R V L G++ AKD RPF + + + + +GT+F Sbjct: 124 GSKLSIDTKSNLQIEYFKDKRKVFLENGQVLFEVAKDK-SRPFIITSGKTSIEVVGTKFE 182 Query: 186 VRQQDNFTQLDVQQHAVEVLLASA---PAQK-RIVNAGESLQFSASEFGAVKPLD----D 237 V+ ++ T + V++ V+V + P Q ++ GE + S+ G + L + Sbjct: 183 VKNLEHITTVSVEEGVVKVSFNNHTLLPNQDISLLKKGEKI--VISDLGKITYLGKTDIE 240 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 E W D L F L E T +RY++ V + SG F D L I Sbjct: 241 EIAPWRNDELIFRKITLKEAFDTFSRYQDLKVEFQNKNFENKLFSGKFNTLEIDKFLFAI 300 Query: 297 AQTLPVKI 304 + P+KI Sbjct: 301 QKIYPIKI 308 >UniRef50_B7S234 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S234_9GAMM Length = 322 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 145/329 (44%), Gaps = 39/329 (11%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN Q +A +W A L + VS + W + ++ A + + L + L Sbjct: 1 MNEETNKQYEQVCEAALNWVACLRSDAVSEGDRQAFALWLGKHNSHRRAMDEAQALWDDL 60 Query: 61 G---GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 +P ++ +A + +R ++ L+L LW + + YR+A G Sbjct: 61 AVVRHIPVNI-DKAANRSRWLATAMVAAACLVLAVF----LWPQLPSDPVSTQYRSAMGE 115 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 L DGS++ LNT S V + QR V L GE+ + + QRPF V + ++ Sbjct: 116 RRTVDLPDGSVIHLNTNSTISVTYTDDQRHVDLERGEVWFQVSPNK-QRPFHVDAGEARI 174 Query: 178 TALGTEFTVRQQDNFTQL----------DVQQ-----HAVEVLLASAPAQKRIVNAGESL 222 TA+GT F + DN T + D+ Q HA E+LL + +R++ + Sbjct: 175 TAVGTAFNIYLDDNSTDVTVTEGVVEVSDIGQTGRRLHAAELLLEN----QRLITGIDGW 230 Query: 223 QFSASEFGAVKPLDDES--TSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLR 279 + S+S DD S +W + L + PL +I L RY+ ++ DP VA L Sbjct: 231 ELSSS--------DDVSKQMAWQRGELVAEEMPLPALIEQLERYQQTRIIIADPNVAALT 282 Query: 280 LSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 +SG L +A L+ IA +L ++I ++ Sbjct: 283 VSGVLQLDQPEASLSAIAVSLDLQITPLS 311 >UniRef50_Q3SU82 FecR protein n=5 Tax=Rhizobiales RepID=Q3SU82_NITWN Length = 320 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 18/288 (6%) Query: 39 WYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTR-----LTRRHVMKGLLLLLG-A 92 W + +++ W +V + G G + ++ R LTRR+++ G L+ LG A Sbjct: 38 WRARSPEHERIWARVAKVH----GASGKILTQRRKTERREKLGLTRRNLVIGGLIGLGTA 93 Query: 93 GGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWY 152 G G+ + G AD+ TAKG + LEDGS++TL SA V F H R V+L Sbjct: 94 GAGYSILPEMLLRGW-ADHITAKGEIRSVTLEDGSVVTLGPDSAIAVDFTTHFRRVQLLA 152 Query: 153 GEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA-SAPA 211 G A + QR F V + TALGT F V + V VE + SA A Sbjct: 153 GMSFFDVAAEP-QRAFTVQAAELTATALGTAFDVAHDAGMLSISVDHGVVEARASGSAIA 211 Query: 212 QKRIVNAGESLQFSASEFGAVKPLDDES---TSWTKDILSFSDKPLGEVIATLTRYRNG- 267 ++AGE + F ++ + A++ E+ SW +++ + + ++A + R+ G Sbjct: 212 AGTKLSAGEWVTFDSATY-AIERGSREAGQIASWRDNLIMAEKEAVSVLVARIGRWIPGR 270 Query: 268 VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 ++ DP + R+SG F L N L + ++ ++ Y IS Sbjct: 271 IVMADPFIGSQRVSGIFDLNNPKRALEAVVHPAGAHVRQVSSYLTVIS 318 >UniRef50_Q1N723 Regulatory protein PupR, putative n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N723_9SPHN Length = 341 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 17/289 (5%) Query: 29 SPQQEARWQQWYEQDQDNQWA-------WQQVENLRNQLGGV--PGDVASRALHDTRLTR 79 SP EA W E D + A W E L++ + P + D R Sbjct: 32 SPDDEAEICAWIEADPRHAVAFARAEAAWDASERLKSAAADITLPPIQQIISEADQRRLS 91 Query: 80 RHVM--KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAA 137 R++M G+ +LL ++ +G Y T G + LEDGS+L LN+ S Sbjct: 92 RNIMVAAGVAILLFVVAAIVTVRTFSGV---ERYETGVGQMRDIALEDGSILHLNSDSEV 148 Query: 138 DVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDV 197 + RF ++ R VR+ GE + + D RPF V R + A+GT F VR + + +L V Sbjct: 149 EARFTSNGRKVRVMKGEASFEISHDP-ARPFDVEARAAVIRAVGTAFNVRLRPSLVELTV 207 Query: 198 QQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP-LDDESTSWTKDILSFSDKPLGE 256 V V +P Q+ +G +Q + + P + ++ T+W ++ + + + Sbjct: 208 THGKVTVHCGDSPLQQVAAGSGAVIQPRSISLTRLGPKIVEQRTAWRAQMVELDGETVEQ 267 Query: 257 VIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 RYR +L D V+ LR+ G F ++ L+ + +LP+++ Sbjct: 268 AADEFNRYRKAPILIGDTRVSALRIGGRFRTTDSQEFLSALQLSLPIRV 316 >UniRef50_Q7M8T7 PUTATIVE TRANSMEMBRANE SENSOR n=1 Tax=Wolinella succinogenes RepID=Q7M8T7_WOLSU Length = 320 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 21/305 (6%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP--GDVASRALH 73 A+ W+ V E + Q+ ++ W + ++Q A ++++ L +P A+ + Sbjct: 9 AATWW-VRCNEGLDEAQKVDFEAWLGESPEHQAALERMKRTWRALDSLPLKNRAANNPQY 67 Query: 74 DTRLTRRHVMKGLL------LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 +T RR KG++ +LL AG W+ Q Y T +G + +L DGS Sbjct: 68 ETPKNRRAWQKGIVVAMFACMLLVAGLQWREGQP----SFEGHYATQRGELREVELPDGS 123 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 L L+T S VRF ++R VRL G+ A +K A +RPFRVL + +GT+F VR Sbjct: 124 HLVLDTASRVWVRFYKNRREVRLEEGQAAFEVSKSA-KRPFRVLAGDLAVEVVGTKFGVR 182 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRI---VNAGESLQFSASEFGAVK--PLDDESTSW 242 + V++ V V + + R ++ GE ++ + G +K L + + Sbjct: 183 HLKEGVSVAVEEGRVRVGQRFSEDEYRFFEELSGGEGVRIKG-DGGIIKREGLFLGTIPF 241 Query: 243 TKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 L F + L E I RY G++ D +R++G+F ++ D+ + + + +P Sbjct: 242 LAGRLEFDEVTLQEAIDEFARYGETGIVLEDEGAKRMRITGSFEIRRLDSFVRALPKIIP 301 Query: 302 VKIQS 306 V+++S Sbjct: 302 VRVRS 306 >UniRef50_Q4KBX2 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KBX2_PSEF5 Length = 308 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 12/212 (5%) Query: 96 WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEI 155 WQ W + T +DY T G L DGS +TLN+ SA V + A +R V L GE Sbjct: 96 WQQWPAST-----SDYHTGVGQQQSITLADGSRVTLNSASALSVAYSADERRVILRSGEA 150 Query: 156 AITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI 215 D QRPF V + QL + + F+VR+ + + V++ V+ AP + Sbjct: 151 LFEPLADP-QRPFVVQAQAQQLQSAASAFSVRRDGHQLTVVVREGQVQFSGDHAPV---L 206 Query: 216 VNAGESLQFSASE-FGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCD 272 + A + LQ+ + A + +D S T+W + L F+ +PLGEVI L RY++G +L D Sbjct: 207 LQADQRLQYQPGQPLLAQQTVDAASLTAWQRGKLIFNGRPLGEVIGELERYQHGRILISD 266 Query: 273 PAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 +A L +SG F L + L + Q P+ + Sbjct: 267 GQLAALAISGVFDLHDPQGSLKALQQRYPLHV 298 >UniRef50_C5SN43 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SN43_9CAUL Length = 325 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 84/302 (27%), Positives = 133/302 (44%), Gaps = 24/302 (7%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA--LH 73 A+ W A L + P+ EA +++W E D Q+ + + ++ L P V +R L Sbjct: 26 AAVWMARLKSDCRLPETEAAFRRWLEVTPDAQFLFDEATDVWEML---PSAVPTRRARLV 82 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 ++RR M + + A Y T KG L D S++TLNT Sbjct: 83 SPVMSRR--MALVGAMAAAVVVTVGGGVYAVNLRPVVYETQKGEQRSMSLTDTSMVTLNT 140 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFT 193 + VR+ ++R V+L GE A D L RPF V TR ++TALGT F VR Sbjct: 141 DTKLSVRYSRNRRYVQLERGEAVFQVAHD-LSRPFVVETRNQRVTALGTVFLVRSDPTEV 199 Query: 194 QLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV---------KPLDDESTSWTK 244 Q+ + VE+ K+ V+A + E V +P D +W + Sbjct: 200 QVALFSGKVEL------RAKQKVSASNGMILKPGERATVREGMTPVVDRPPSDVIRAWQR 253 Query: 245 DILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + FS L E + L RY R ++ D VA L+++G F N++A + +A+ +K Sbjct: 254 QEVVFSGVTLAEAVNELNRYSRLQIVVADSGVASLKVAGVFQTGNSEAFVRSMARIHGLK 313 Query: 304 IQ 305 ++ Sbjct: 314 VR 315 >UniRef50_A9BM35 Anti-FecI sigma factor, FecR n=2 Tax=Comamonadaceae RepID=A9BM35_DELAS Length = 344 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 40/282 (14%) Query: 58 NQLGGVPG-------------DVASRALHDTRLTRRHVMKGLLLLLGAG-----GGWQLW 99 N LGG+ G D ASR+ R RR ++ LLG G G + W Sbjct: 57 NLLGGMSGGLREQFQETALLADRASRSTQAVR--RRKLLLSFAGLLGTGALAGRGAYWYW 114 Query: 100 QSETGEGLRADYRTAKGTVSRQQLEDG------SLLTLNTQSAADVRFDAHQRTVRLWYG 153 Q + Y T + + L DG SL+ L QSA V +R+V + G Sbjct: 115 QQPIHT---SAYATRNSQILKITLADGKLPLQASLVELAPQSAIAVTLYRQRRSVSMARG 171 Query: 154 EIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL------- 206 E+ A D RPF V+TR+ ++ +GT FTVR + + V+ V V + Sbjct: 172 EVRFDVAPDP-DRPFEVITREARIEVVGTVFTVRDRGGPVTVGVEHGHVRVRVLGRDAQD 230 Query: 207 ASAPAQKRI-VNAGESLQFSASEFGAVKPLDDESTS-WTKDILSFSDKPLGEVIATLTRY 264 A+ PA + + G+ + + AV+ D + S W + L F + PL E +AT+ Y Sbjct: 231 ATGPAAATLDLLPGQIVDIRNGQAEAVRQADAATLSAWREGWLVFENTPLAEALATVNAY 290 Query: 265 RNGVLR-CDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 R ++ D VA LRL+G F ++ +L V+ LP++++ Sbjct: 291 RTQPIKAADARVAALRLTGRFRANDSAGLLAVLPSILPLRVR 332 >UniRef50_A8ICQ2 Putative iron siderophore sensor protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8ICQ2_AZOC5 Length = 333 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 89/306 (29%), Positives = 141/306 (46%), Gaps = 20/306 (6%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDT 75 A W L + + A ++ W + A +Q E L +G AL Sbjct: 25 ALEWLVFLHSGQETDADWAAYEDWRASGVAERKAAEQAERLWAGIGP--------ALRRP 76 Query: 76 R--LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 R L RR V+ G + L G G + + L AD RTA G L DG+ + L+ Sbjct: 77 RAGLPRRSVLAGAGIALVGGAGLAAFLGMRRD-LFADVRTAVGERRTLTLADGTRIELDA 135 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFT 193 ++ D+ + A R + L G I ++ A D RPF V G ALGT F + + + Sbjct: 136 ATSLDLHYSAKTRRIELLEGRIFVSVAADP-NRPFIVDAGGGAARALGTAFEISRSGDMV 194 Query: 194 QLDVQQHAVEVLLASAPAQKRI-VNAGESLQFSASEFGAVKPLDDESTS---WTKDILSF 249 + V +H V V + V+AG ++FS + G +P + S W +L+F Sbjct: 195 NVVVSEHTVRVCYPRETDGPHVDVDAGSEVEFSRAG-GLARPHAADVVSRMSWRNGLLAF 253 Query: 250 SDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 D+PL EV+A ++RYR+G ++ D +A L +SG F +T A+L+ ++ LPV I + Sbjct: 254 QDRPLAEVVAQISRYRHGRIVIVDGELARLPVSGLFESADTAALLDALSAALPVTIDQLP 313 Query: 309 RYWINI 314 W+ + Sbjct: 314 --WLTL 317 >UniRef50_Q3HKE5 FecR protein n=3 Tax=Rhodobacter sphaeroides RepID=Q3HKE5_RHOS4 Length = 324 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 82/288 (28%), Positives = 127/288 (44%), Gaps = 22/288 (7%) Query: 37 QQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKG----------- 85 Q W E+D + AW +VE L + PG+ + A M Sbjct: 33 QVWLEEDPAHVAAWAEVEALWGETR-APGERLAEAEAGALSVYLAAMDRGARRRRVLRGG 91 Query: 86 ----LLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRF 141 L L +G GG W L Q + L ADY +A+G L DGS + L+ SA V Sbjct: 92 TVAVLALAIGLGGLW-LRQPHLLQDLGADYASARGERRSVSLPDGSRVLLDADSAIRVDM 150 Query: 142 DAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHA 201 D R +RL G + + RPFRV +G++T GT F VR ++ Q+ ++Q Sbjct: 151 DGPDRLLRLLRGAASFEVTRSP--RPFRVRFGKGEVTVHGTVFDVRLLEDGGQIVLRQGR 208 Query: 202 VEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIAT 260 V V P ++ +V GE +V+ +D E++ W +F LG+++AT Sbjct: 209 VSVRYPGLPVEQPLV-PGEQFSVDGPGRPSVEAVDLAEASGWQDGRFAFYRMRLGDLVAT 267 Query: 261 LTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 L RY G +L + R+SG+ L + +A L + T+ + I + Sbjct: 268 LERYLPGHILIASRDLGDRRVSGSLDLDHPEAALESLRDTVGLTITRL 315 >UniRef50_D1NXK1 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1NXK1_9ENTR Length = 318 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 15/288 (5%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV---ASRAL 72 A+ W + + ++ Q+E +QQW + ++ A+ + L G+ V +SR Sbjct: 20 AAFWVIKTTQKNLTSQEEHEFQQWVTTSEQHRNAYFKARQLWGLTSGIALSVQKGSSRKT 79 Query: 73 HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLN 132 + + R + L+L + +W + E + DY+ G + L DGS + L+ Sbjct: 80 GNIKFAPRWIAMASALILSVFS-FAIWSFLSQESV--DYQAKNGEILHIILPDGSQVDLD 136 Query: 133 TQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEFTVRQQD 190 + +A + F+ R V L G + A + Q RPFRV G + ALGTEF + Q+ Sbjct: 137 SGAAITLEFNEGYRQVNLHSGRAYFSAAPISTQEPRPFRVKANNGTVQALGTEFEIDTQE 196 Query: 191 NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFS 250 + V +H V++ L S Q+ I AG+ + V SW K ++ F Sbjct: 197 KQVNVAVYEHQVQITLLSGETQRVI--AGDQASYQQHISPMVPANIQHGVSWRKGLIIFQ 254 Query: 251 DKPLGEVIATLTRYRNG--VLRCDPAVAGLRLSGTFPLKNTD-AILNV 295 + VI L+RYR +L +P A +SG F + + + A+L V Sbjct: 255 QSSVDHVIHELSRYREKPIILLGNPPQA--MISGVFQIDSVENALLTV 300 >UniRef50_Q217A2 Putative FecR n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q217A2_RHOPB Length = 334 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 3/191 (1%) Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 ADY TA G + L DGS +TLNT SA +RF +R+VRL GE DA PF Sbjct: 127 ADYMTATGDRQQVILPDGSRMTLNTASAVALRFSNGERSVRLLQGEAFFDVVPDATH-PF 185 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 V R ++ GT F+VR D + + + +VEV A+ + G S+ SA+ Sbjct: 186 TVAGRFAEVGVKGTAFSVRTDDQQDVVVLARGSVEVARLPDRAETARLEPGYSVSASATA 245 Query: 229 FGAVKPLDDEST-SWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFPL 286 +D S+ +W + F+D+PL +V+ + RY VL D + + +SG++ L Sbjct: 246 LSGASHIDIASSLAWLDGRIVFNDRPLRQVLDEVKRYYPRPVLIADRRIGDVTVSGSYRL 305 Query: 287 KNTDAILNVIA 297 N + + +A Sbjct: 306 ANPEGTIRSLA 316 >UniRef50_A9BUI6 Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BUI6_DELAS Length = 440 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 109/237 (45%), Gaps = 15/237 (6%) Query: 76 RLTRRHVMKGLLLLLGAGGG-------WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 R RR + LL + G G G W+ W + + TA G + Q L DGS Sbjct: 190 RTGRRRALSTLLGMAGLGVGSPAIWLAWRQWMPQ----YQVRLATATGRLLNQPLPDGSS 245 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ 188 LTL+ S A+V F A +R VRL G A+D + PF V Q+T LGT F V Sbjct: 246 LTLDAASRAEVDFYATRRQVRLLAGSAFFAVARDT-EWPFMVQAADVQVTVLGTRFEVAL 304 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 +D+ + V V+V S + + AG+ L+ + + AV+ +W + L Sbjct: 305 EDDAVLVAVDAGRVQVRDGSGAPHE--LGAGQMLRLAPGQTAAVQ-TVAAVAAWREGWLD 361 Query: 249 FSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 F + PL EV+ L RY LR +P A L + G + L ++ +TLPV +Q Sbjct: 362 FQNTPLAEVVRRLERYSLQPLRVEPDAAALPVLGRVRIAAAQGWLRMLPRTLPVSVQ 418 >UniRef50_B4SLV2 Anti-FecI sigma factor, FecR n=3 Tax=Stenotrophomonas RepID=B4SLV2_STRM5 Length = 314 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 90/318 (28%), Positives = 144/318 (45%), Gaps = 24/318 (7%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA 71 AL A+ W+A L + S ++ RW+ W + D + AW++VE++ + A+ A Sbjct: 9 ALEQAAEWFA-LREQGWSDDEQYRWRAWLQADAGHADAWRRVESVWQSFAPLSAPAAATA 67 Query: 72 LHDTRLTRRHVMKGL--------LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 L RR ++GL + LLG G +T GL+ RTA G L Sbjct: 68 LDAAGRRRRQALRGLGGALGIGAVSLLGLHG------LQTQRGLQTQ-RTAAGHTGHWIL 120 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALG 181 DGS L LN S + + +R + L GE+ + T P V +L +G Sbjct: 121 ADGSQLWLNADSEVTIDIGSDRRALHLLRGELLLQTGHHPAFADMPLSVHVPGARLQPIG 180 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL--DDES 239 T F V ++ ++LDV V L + V AG ++Q G + P+ D Sbjct: 181 TRFAVGREAQGSRLDVFDGVVRCLPLFGASLD--VPAGGAVQIG--PMGGLSPVAADPLR 236 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 W + L D PL VI L R+ G L CDPA+A L+++ P ++ L+++A+ Sbjct: 237 GDWQEGRLQVQDTPLIRVIDELARHHQGYLGCDPALAALKVTAVLPRLDSTQALHLLARA 296 Query: 300 LPVKIQSITRYWINISPL 317 LP++++ +W + PL Sbjct: 297 LPIRVEQRWPWWTVVRPL 314 >UniRef50_A3WYF9 Putative FecR n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYF9_9BRAD Length = 326 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 23/310 (7%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG--------- 65 +A W+ L GE S A +++W ++ A+++V++L + PG Sbjct: 15 TALEWFTRLRGE-TSAADRAAFERWVAASPSHRQAFRRVQSLWSAAES-PGVRVAQEESK 72 Query: 66 ------DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 D RA + +R V ++ L GG L + + +RAD +A+G Sbjct: 73 NLSAYLDAMDRAKTRRKARKRGVATVIVGLAVLGGVIALERPNLFQDMRADAVSARGERR 132 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 +L DGS + L+ SA RF +R V L G + K A + F V G + Sbjct: 133 TIELPDGSTVLLDADSALTQRFTNGERRVVLLRGGAYFSVVKAA--QSFVVEASSGTVEV 190 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DE 238 LGT+F VR ++ T + V Q V V S Q+ ++ G+ + F G V+ D Sbjct: 191 LGTKFDVRLSNDDTVVTVAQGRVAV--TSPSMQRALLEPGQQVTFDKVGVGPVRNADLAA 248 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 S +W + F +VI L RYR G ++ A+A R+SG+F L + DA L + Sbjct: 249 SMAWHEGRFVFYQARFADVIGELQRYRPGRMVIASAALADSRVSGSFTLDDPDAALESLR 308 Query: 298 QTLPVKIQSI 307 T+ + SI Sbjct: 309 STVNFETYSI 318 >UniRef50_Q79AD3 HasS protein n=1 Tax=Serratia marcescens RepID=Q79AD3_SERMA Length = 317 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 5/200 (2%) Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK--DAL 164 L+ADY+T +G V L DGS + L++ SA + + A +R VRL G A A Sbjct: 109 LQADYQTVRGEVREVALPDGSRVALDSGSAIALAYSADERKVRLLSGAAYFIVAPLGGAE 168 Query: 165 QRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF 224 RPFRV + G ALGTEF+V + + + V QH+V V L + +V ++ + Sbjct: 169 SRPFRVEAKNGVTQALGTEFSVARTEQGVDVSVHQHSVRVTLERG-ERSLVVAQRQAAHY 227 Query: 225 SASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGT 283 + + + +W + L +PL + +A L RYR ++ +PA+ +SG Sbjct: 228 RNGQLQLTRQTAGDD-AWRRGWLVIDRQPLTQALAQLNRYRGTRIVAVNPALRTRTVSGV 286 Query: 284 FPLKNTDAILNVIAQTLPVK 303 F L D + I Q L + Sbjct: 287 FALNKLDDGVGAIRQELSAR 306 >UniRef50_D0XYL4 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XYL4_9CAUL Length = 323 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 30/294 (10%) Query: 28 VSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL---GGVPGDVASRALHDTRLT---RRH 81 +S Q +A + W QD A+ + + L G+ D A A H T RR Sbjct: 29 LSDQDQAALEAWAAQDPRRAGAYAKALAVNAHLDRAAGLGADFAP-ASHPTAKAADRRRL 87 Query: 82 VMKGLLL----LLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAA 137 + G LL ++GA G L LR TAKG + R LEDGS +TLNT + Sbjct: 88 LATGGLLAAASVVGAVGYAAL-------SLRGRVTTAKGDIRRAPLEDGSAVTLNTDTTI 140 Query: 138 DVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF-TQLD 196 FD R V L GE AKD RPF V+ ++ A+GT FTVR D+ + Sbjct: 141 RAAFDGKMRRVDLLRGEALFDVAKDP-ARPFVVVAGDVRVRAVGTSFTVRTHDDGQVGVI 199 Query: 197 VQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD------DESTSWTKDILSFS 250 V++ VEV + R+ +A ++Q + + GA+ P D + +W + + Sbjct: 200 VREGVVEVWRGAEGKPVRL-SAEHAVQVATA--GALVPTTVGSAAVDRAMAWRQGQIDLD 256 Query: 251 DKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 LG+ RY + ++ DPAVA L+++G F + D A +L ++ Sbjct: 257 GLTLGQAADEFARYSDRRIVIDDPAVAKLKMTGLFSASDPDGFAKAAALSLGLR 310 >UniRef50_Q0C5P1 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5P1_HYPNA Length = 344 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 36/311 (11%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP---------G 65 +A W L P + A + W D + A+++ E L + L +P G Sbjct: 14 AARSWAVYLHSGDAKPDKIAEFDAWLAADAAHVHAFRRYEKLMSDLVLIPELGEVGLFEG 73 Query: 66 DVASRALHDTRLTRR---HVMKGLLLLLGAGGGWQLWQS-----ETGEGLRADYRTAKGT 117 A+ + ++ RR V ++++ GGG ++ + + + Y T Sbjct: 74 TRAAPGVIAAKVPRRSSQRVAAFVMMIALVGGGITVFGAGRTFQDASPAMVPGYETTIAE 133 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 + QL DGS++TL +S + F R V+L+ GE A D RPF V + Sbjct: 134 IRDVQLADGSVVTLGARSRIEPTFTDKMRIVKLYEGEAFFDVAPDP-ARPFYVEAGDRLI 192 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQ---------KRIVNAGESL--QFSA 226 +GT F VRQ ++ V + VEVL A P + K ++ AG+ + + + Sbjct: 193 RVVGTRFDVRQGPETVRIAVVEGVVEVLQADNPRKAEAAREGIAKDVLRAGDEVVARIGS 252 Query: 227 SE--FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRY--RNGVLRCDPAVAGLRLSG 282 E G ++P E+ W + L++ + LGE++A RY R V + +A LR++ Sbjct: 253 GEKTIGEIEPA--EAAPWRRGWLTYENASLGEIVADANRYSPRQIVFEGE-GIADLRMTA 309 Query: 283 TFPLKNTDAIL 293 F ++ D + Sbjct: 310 AFSVEKIDQFI 320 >UniRef50_B1J3A1 Anti-FecI sigma factor, FecR n=6 Tax=Pseudomonas RepID=B1J3A1_PSEPW Length = 328 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 12/226 (5%) Query: 86 LLLLLGAGGGWQ--LWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDA 143 L+L +G GGW W + L+AD+ ++ + + L D S +TL+ SA V F Sbjct: 103 LVLAVGVAGGWHPGYWVQD----LQADF-SSTDAIRQVTLADQSQVTLDAGSAIAVDFQQ 157 Query: 144 HQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVE 203 QR VRL +G PF V GQ+ LGTEF VR+Q Q+ V+ V Sbjct: 158 GQRHVRLLHGAAFFKVTHTGA--PFVVQAAGGQVRVLGTEFEVREQAEGAQVTVRNGRVA 215 Query: 204 VLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLT 262 V A A R + A + L ++ + G +D +S +W + +++ PL +V+ L Sbjct: 216 VTPAQGQA-ARELTANQQLAYARGQAGDTASVDSDSRLAWRQGWVNYYQVPLAQVVGDLG 274 Query: 263 RYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 RY G ++ D + ++SG+FP++ A L+ + + + Q++ Sbjct: 275 RYYPGRIVLLDSELGQRKVSGSFPVREPLAALDSLGKVMGFSRQTV 320 >UniRef50_Q82VA6 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82VA6_NITEU Length = 408 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%) Query: 95 GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGE 154 GW WQ + + + TA+G + L DGS L L+T + A+V +R VRL G+ Sbjct: 174 GWSTWQHQPT--FQQSFATARGEQKKVNLPDGSTLWLDTATRAEVALYRQRREVRLTDGQ 231 Query: 155 IAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF----TQLDVQQHAVEVLLASAP 210 A+ + +PF VLT ++T +GT F+VR+ + + V V +AS Sbjct: 232 -ALFAVQSNPDQPFDVLTGGTRITVVGTRFSVRRTRSGLGAEGSVSVVVEEGRVRVASRS 290 Query: 211 AQKRI-------VNAGESLQFSASEFGAVKPL---DDESTSWTKDILSFSDKPLGEVIAT 260 A ++ ++AG+S+ A+ GA+ P+ D + +W + +SFS PL + +A Sbjct: 291 AAHKMDSSSSVELSAGQSIIADAA--GALGPVNRDDAPAATWREGRVSFSGTPLMQALAE 348 Query: 261 LTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 RY + G++ DPAVA L+++G+F L+ A + + LPV++ + Sbjct: 349 FERYGDTGLVIRDPAVAALKVNGSFDLRQIGAFARALPRVLPVQLST 395 >UniRef50_A9CLD9 Transmembrane sensor n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CLD9_AGRT5 Length = 311 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/311 (27%), Positives = 136/311 (43%), Gaps = 16/311 (5%) Query: 5 LTDSRRQALR-SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + D +ALR A+ W ++ + + +W + ++ A+QQ L LG Sbjct: 1 MLDENFEALRREATAWIVRITSGTATTEDAEALLRWRSRSDAHEQAFQQSARLWKNLGSA 60 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG-----EGLRADYRTAKGTV 118 G+ +R + +TRR + + GA G + SE G + + ADY T G Sbjct: 61 LGE--TRKTSASTVTRRSFIAAGSVAAGAAGVGVVL-SELGFLPSVDAMLADYATGVGEQ 117 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +L DGS L+ + + + R + L G DA RPF V G T Sbjct: 118 RTVELVDGSTAILDGGTTLSLDYSPSSRHLVLTSGAAVFDVVHDA-ARPFVVTAANGDTT 176 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 A GT F+V+ + DV +E + +N GE + +S + G D E Sbjct: 177 ATGTSFSVKHGEE----DVSIECLEGHITVQCLGDSQLNGGEGISYSRAGLGKKVAADIE 232 Query: 239 STS-WTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + + W + +L F D+PL +V++ L R+R G V+ + R+SG F L D IL + Sbjct: 233 TAAAWRRGLLIFEDRPLADVVSDLNRHRRGRVVIASSDLRSRRMSGVFHLNRPDEILAHL 292 Query: 297 AQTLPVKIQSI 307 +TL V+ S+ Sbjct: 293 EETLQVRPVSL 303 >UniRef50_A4Y0Z0 Putative FecR n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0Z0_PSEMY Length = 338 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 4/201 (1%) Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 LRAD+ TA G QL DGS + LNT SA R D QR +L GE AKD+ R Sbjct: 131 LRADHVTAVGQRQSLQLADGSRVLLNTDSAFTSRIDERQRVTQLLRGEAYFDVAKDS-SR 189 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA 226 PF V +++ GT F VR + ++ V+ +EV A + + G+S++ Sbjct: 190 PFEVSAGPVRVSVRGTAFAVRYLGDAAEVSVEHGEIEV-HARGNDTRIHLRGGDSIRVGP 248 Query: 227 SEFGA-VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTF 284 G + +W + L F D+PL EV+ L RY G ++ + + LR++G + Sbjct: 249 DGVGQRTRASSASQLAWVQGRLVFDDRPLHEVLDELRRYYPGWIINGNARLNDLRITGNY 308 Query: 285 PLKNTDAILNVIAQTLPVKIQ 305 L +I+ +AQ ++ Sbjct: 309 RLSEPASIMRSLAQVTSAQLH 329 >UniRef50_Q4KI13 Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Pseudomonadaceae RepID=Q4KI13_PSEF5 Length = 329 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 11/212 (5%) Query: 93 GGGWQL--WQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRL 150 G GWQ W + G ADY +A G V L D S +TL+ SA V F +R V+L Sbjct: 110 GAGWQPGRWVDDLG----ADYVSAPGQVRTLTLADQSQVTLDADSAIAVDFSRGERHVQL 165 Query: 151 WYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP 210 G + + PF V ++G+ LGT+F VR Q Q+ V V V A Sbjct: 166 RRGAGFFSVSHTG--EPFVVDAQEGEARVLGTQFEVRLQPGGAQVTVLSGRVGVTPAKGA 223 Query: 211 AQKRIVNAGESLQFSASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNG-V 268 AQ+ ++ AG+ + + + +D E+ +W + L++ PL EV+ L RY G + Sbjct: 224 AQQ-VLGAGQQVAYGHGVAAPLHAVDSEAQLAWRQGWLNYYHAPLAEVVDDLRRYFPGRI 282 Query: 269 LRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 L + +A R+SG+F K+ A+L+ + L Sbjct: 283 LLLNDELAARRISGSFSSKDPQAVLDSLQAVL 314 >UniRef50_C5SGH1 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGH1_9CAUL Length = 307 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 7/185 (3%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y T G L DGS +TLNT S R + R V L GE A PF V Sbjct: 101 YETKVGKRQAVVLADGSRVTLNTGS----RIEVRGRKVDLMRGEALFEVAHRPDASPFDV 156 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS-ASEF 229 T Q+ GT FTVR+++ T +++ + VEV AQ + AG+++ A + Sbjct: 157 RTDMAQVRVTGTRFTVRREETGTDVNLIEGRVEVRGERPGAQIVKLKAGQAVAVGRAGDL 216 Query: 230 GAVKPLDDESTS-WTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLK 287 G V P D S W + L+FS PL E +A + RY + ++ D ++ LR+ G F Sbjct: 217 GPVHPADTAGVSDWLQGRLTFSRTPLKEAVAEMNRYSDRKLIVADARLSALRIDGEFEAG 276 Query: 288 NTDAI 292 NT+A+ Sbjct: 277 NTEAL 281 >UniRef50_C6XPM9 Anti-FecI sigma factor, FecR n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPM9_HIRBI Length = 349 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 34/334 (10%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQW-------AWQQVENL 56 L T RR+A A+ W L + VS AR+ QW + N+ AW +++L Sbjct: 10 LPTRQRREA--QAAEWVTKLDADTVSAIDRARFDQWMSSSEKNRECYYRIAKAWSALDDL 67 Query: 57 RNQLGGVPGDVASRALHDTRLTRRHVMKGL-----LLLLGAGGGWQL-WQSETGEGLRAD 110 D + L R R +++ + +L++G L + + A Sbjct: 68 EELQHLAESDDVAELLKQNRRQSRKIVQSIGAMAAMLIIGFSTWVALPYLNTQTYKYEAF 127 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 TA G + QL DGSL+ NT + + + + R + L GE A A RPF V Sbjct: 128 ISTAVGEMQNIQLPDGSLIKANTNTHLVIHYSKNSRDINLLRGE-AFFEVAHAPDRPFSV 186 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASA-----------PAQKRI-VNA 218 + Q+ A+GT F VR ++ + V++ V ++ A AQ+ ++A Sbjct: 187 VAGDRQVRAVGTAFNVRLREAKLAVTVEEGRVALINKKAMLVQNKNPENNAAQELTQISA 246 Query: 219 GESLQFSASEFGAVKPLDDES----TSWTKDILSFSDKPLGEVIATLTRYRNGVLR-CDP 273 G+ F ++ ++ L E+ SW ILSFS +PL +I+ ++RY N + D Sbjct: 247 GQRAVFD-TDIEELEVLQAENLQRRLSWRNGILSFSGEPLSFMISEVSRYSNVEIEIADE 305 Query: 274 AVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 ++ + ++G F + DA+L V+ V I+ I Sbjct: 306 SLKDMPVAGYFKVGEVDAMLEVLDLMSDVTIERI 339 >UniRef50_A9CFJ7 Two component sensor kinase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CFJ7_AGRT5 Length = 323 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 11/310 (3%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQE-ARWQQWYEQDQDNQWAWQQVENLRNQL-GG 62 LT +R+ R A+ W + + P+ E A +++W E D +N A+ + + + Sbjct: 10 LTRDQRKRNREAADWV-FRNRDPDQPETELAEFRRWMELDPENCRAYTAAKRILGEARTA 68 Query: 63 VPGDVASRALHDTRLTR-RHVMKGLLLLLGAGGGWQLWQSETGEG-LRADYRTAKGTVSR 120 + D R + +R R+ + ++ + A G L+ + G + AD + + Sbjct: 69 IRSDAGLREAPVSSSSRGRNAIISSVVAIAAAG--TLFIALDGPMRMSADIMSDTDEMPE 126 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 LEDGS + LN SA + F + +RTVRL G+ + DA +RPF V +TAL Sbjct: 127 VTLEDGSRVQLNASSAIALDFTSERRTVRLLRGQAFFQVSPDA-KRPFSVSADDTLVTAL 185 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGES-LQFSASEFGAVKPLD-DE 238 GT F VRQ T++ V +H+V V A V GE L + + ++ D + Sbjct: 186 GTAFDVRQSATDTRIAVTEHSVRVDFKEPGALPVKVGEGEEVLHLNETGKSTIRKTDANT 245 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W + L+ + PL VI + R+ +G ++ + A A +SGT + +T++ LN + Sbjct: 246 ALAWRRGQLTVDNMPLSYVIEEIQRHFHGRIVIGNEATARRVVSGTLFVTDTESALNFLR 305 Query: 298 QTLPVKIQSI 307 L ++ I Sbjct: 306 TALNIQTYKI 315 >UniRef50_B7UVL1 Probable transmembrane sensor n=7 Tax=Bacteria RepID=B7UVL1_PSEA8 Length = 280 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 3/199 (1%) Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP 167 R + TA G L DGS L L++ S +V + R V L G++ + A RP Sbjct: 66 RERFATAIGERRDVTLADGSQLLLDSGSQIEVSWHPLSRRVALRAGQVLFEVSP-ARYRP 124 Query: 168 FRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS 227 F V + LGT F VR+ D+ ++ +++ VEV ++ ++ G+ + Sbjct: 125 FVVSAGSTDIRVLGTRFNVRRLDDDVRVTLERGRVEVGTSATAQAPVVLLPGQQVDAIGG 184 Query: 228 EFGAVKPLDDEST-SWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFP 285 + + +D + +W D L F PLGE +A L YR +L DP++A LRL+G F Sbjct: 185 QLMPLAKVDAATAMAWKDDRLVFERTPLGEAVALLRHYRKAPILLDDPSLASLRLTGVFA 244 Query: 286 LKNTDAILNVIAQTLPVKI 304 N D +L+++ LPV + Sbjct: 245 AHNADRLLDLLPSILPVAV 263 >UniRef50_Q82WV2 Possible transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82WV2_NITEU Length = 309 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 3/193 (1%) Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 TA G + L DG+ + +NT S + R V L GE A+ D R F V Sbjct: 104 TAIGEHQQIILADGTTIDINTDSTLRLALYGFTRKVTLERGE-ALFRIGDERLRSFEVHA 162 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 G L +GTEF V +++ + V + AVEV + R+++ GE L +SA + + Sbjct: 163 GNGILRDIGTEFNVIKEEGNVTVAVLEGAVEVGIDHQNDTVRLLHGGEQLTYSAYDLSEI 222 Query: 233 KPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTD 290 D E+ T+W K L F + PL EVI + RY + +R DP + LR+SG F + Sbjct: 223 SSTDKETVTAWRKSRLIFRETPLEEVIRQINRYHSRPVRLGDPQLNTLRVSGEFNSADRA 282 Query: 291 AILNVIAQTLPVK 303 ++ + LP++ Sbjct: 283 GLVQALITLLPLR 295 >UniRef50_B4WD83 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WD83_9CAUL Length = 332 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 43/321 (13%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQ----QVENLRNQLGGVPGDVAS 69 R+A W A + V + +A + W E+D DN A++ ++ L G GD+A Sbjct: 14 RTAEDWLARMRRPTVPARDQAAFLDWLEKD-DNLPAYETAKARLAGLAPLAGAFEGDLAR 72 Query: 70 -RALHDTRLTRRHVMKGL---------LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 R RR ++ GL +L++ G G Q ++ G + Y +A G ++ Sbjct: 73 LRGRKPVNTGRRILIGGLATSAVAAIAVLMILPGLGSQ--SADKGAVV---YASAPGEIT 127 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 LEDGS +TL+ + VRF+ R V L G + RPF+V + Sbjct: 128 DLALEDGSRVTLDADTQIRVRFEDDARRVALLQGAAYFDVVHNP-ARPFQVAVADRNVIV 186 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEV-------------LLASAPAQKRIVNAG-ESLQFS 225 GT FT + N ++ + + V + + AP QK + G + + S Sbjct: 187 TGTRFTTTLRRNRAEVSLLEGRVAIGRHDVGKRRSLDHAVMLAPGQKAVFTPGLDRVHLS 246 Query: 226 ASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTF 284 +P + +T+W + L F D PL +VIA RY + ++ DPA+A R++ Sbjct: 247 -------RPDVESATAWRERRLIFHDAPLSDVIAEAARYADRPMVIADPALAKTRVTVVL 299 Query: 285 PLKNTDAILNVIAQTLPVKIQ 305 PL +++ + LP+ I+ Sbjct: 300 PLTGQVGLIDRMDDLLPISIE 320 >UniRef50_B4WBG4 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBG4_9CAUL Length = 331 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 84/307 (27%), Positives = 137/307 (44%), Gaps = 17/307 (5%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 D RR R A+ W+A L+ +RV+ + QW + N A+ ++E + G + GD Sbjct: 8 DVRR---REAASWFATLNQKRVAASDITAFSQW-RRTPANAEAYARIETMWEAAGSLKGD 63 Query: 67 V-------ASRALHD-TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRA-DYRTAKGT 117 +RA D +R + + KGL+ + + T R Y T G Sbjct: 64 ADIAALTAGARARADASRKLQGRLAKGLIPIGAVAAVAAVVVGVTMWSARPLSYETGLGE 123 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 L DGS +TL+T+S VR +R V L G+ D RPF V + Sbjct: 124 RRIVVLADGSKVTLDTESRITVRLTGRRRAVELASGQAFFDVEGDP-ARPFVVRAGATDV 182 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 TA+GT F VR+ Q+ + + V+V+ + + G+ + +AS AV+ +D Sbjct: 183 TAVGTRFDVRRAGGGAQVTLVEGKVDVVDRGQATPRWSLAPGQQI-VTASPRPAVRSVDA 241 Query: 238 ES-TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNV 295 S TSWT L F+ + +A + RY + D PA+A + +SG F + + ++ Sbjct: 242 ASETSWTSGRLIFAGDTVEAAVAEVNRYTASKVVLDAPAIADIAVSGAFNTGDVEGFVSA 301 Query: 296 IAQTLPV 302 + + PV Sbjct: 302 LTELYPV 308 >UniRef50_B8H128 FecR family protein n=3 Tax=Caulobacter RepID=B8H128_CAUCN Length = 357 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/322 (27%), Positives = 136/322 (42%), Gaps = 33/322 (10%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 R+A A+ WY +SG+RVS A + W E N A+ ++E L + + D Sbjct: 24 RRARDEAAAWYGKMSGQRVSNADLAAFFAWRENSL-NDAAYTRIEALTTSVRALADDPRL 82 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSET-------------GEGLRADYRTAKG 116 +A+ +T R + L LG G G + G+ + YRT G Sbjct: 83 QAIAETAARRPRGVVARLRSLGQGAGLRTAGVGAALVAAMVIGAVLLGQVGQQTYRTQIG 142 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 L+DGS + LNT S VR QR++ L G+ A DA RPF V Sbjct: 143 ERRAVSLDDGSTIELNTNSQVRVRLSKTQRSLILDRGQAMFIVAHDA-ARPFVVTAGDTS 201 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLA-------------SAPAQKRIVNAGESLQ 223 + A+GT F V + ++ + + V+V A S P I+NAG+ + Sbjct: 202 VRAIGTRFEVYRAAGAVRVTLAEGRVQVSKAGRRNDGGGQGGERSTPV---ILNAGQRVD 258 Query: 224 FSASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AGLRLS 281 + + + +D + T WT+ L+F D L E +A + RY + P A R++ Sbjct: 259 MAPAAPASPVAVDVAAVTGWTRGRLTFKDASLAEAVAEVNRYSRRQVVLGPGTPADQRVN 318 Query: 282 GTFPLKNTDAILNVIAQTLPVK 303 G F +T+ +A L +K Sbjct: 319 GEFDAGDTETFARGMAVLLDLK 340 >UniRef50_B7WWP0 Anti-FecI sigma factor, FecR n=2 Tax=Comamonas testosteroni RepID=B7WWP0_COMTE Length = 331 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 80/263 (30%), Positives = 117/263 (44%), Gaps = 18/263 (6%) Query: 65 GDVASRALHDTRL--TRRHVMK-----GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 G++ H R+ TRR + G+ L G G W Q L T G Sbjct: 71 GEMPLPGTHSARVQQTRRRALSVLGVAGVAGLAGMLGRWHWLQPTEQMALH----TGHGQ 126 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 + L DGS L L + A V +R V L GEI + A DA +RP V T G++ Sbjct: 127 HLSRHLPDGSQLDLAPGTDASVLLHRQRREVHLQQGEIRLNVAHDA-ERPLEVHTALGRV 185 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK---RIVNAGESLQFSASEFGAVKP 234 LGT F+V + Q+ V Q V V A A + ++ AG+ L+ A A Sbjct: 186 RVLGTVFSVALRPAGLQVSVAQGRVAVWKQGAMADRPPDALLTAGQGLRLDAGGRLAPYS 245 Query: 235 LDDEST-SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVA--GLRLSGTFPLKNTDA 291 L+ +W++ L F PL EV+A Y L D AV+ LRL+G+F L+ Sbjct: 246 LNAADVGAWSEGWLVFDHTPLPEVVARWNDYLTQPLVLDDAVSLQALRLTGSFKLREPAT 305 Query: 292 ILNVIAQTLPVKIQSITRYWINI 314 + + ++LPV++QS+ + I Sbjct: 306 FIASLPRSLPVRVQSLPDGRVTI 328 >UniRef50_D0XU60 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XU60_9CAUL Length = 337 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 85/324 (26%), Positives = 132/324 (40%), Gaps = 31/324 (9%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL---- 56 M LTD Q A+ W+A L + +Q W E D ++ A++ +E L Sbjct: 1 MTAPLTDPISQV---AADWFARLRDDDADLDAWTTFQAWLEADPAHRLAYEAMETLWLDL 57 Query: 57 --------RNQLGGV--------PGDVASRALHDTRLTRRHVMKGLLLLLGAGG---GWQ 97 N G P A+ A R +R + + L+ +G G Sbjct: 58 EDDAPQALLNAAGATATVETLTRPSGPATPAPTPARASRPGHRRPIPWLIASGAIAAGLV 117 Query: 98 LWQSET--GEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEI 155 W + + DY TAKG V L DGS LTL + V +A +R V L GE Sbjct: 118 AWVAASRWSPSAPIDYATAKGEVRAVTLVDGSRLTLGGATRITVEMNARRRAVTLSEGEA 177 Query: 156 AITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI 215 A +A RPF V ++ LGTEF + + T + V++ V V + R+ Sbjct: 178 TFDVAHEA-NRPFVVELGDQRVRVLGTEFNISRDQGHTAVTVRRGVVAVAQVGG-GEVRL 235 Query: 216 VNAGESLQFSASEFGAVKPLDDEST-SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPA 274 + L S V+ D ++ +W L + PL V+A RY +R DP+ Sbjct: 236 TRGQQVLHAEGSTVQEVREADPDAVFAWRSGKLIYDKAPLAMVVADFNRYGGPPIRVDPS 295 Query: 275 VAGLRLSGTFPLKNTDAILNVIAQ 298 A + +SG F + + A++ +A+ Sbjct: 296 AAKVTVSGVFLVDSPRAMVERLAR 319 >UniRef50_Q4KE34 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KE34_PSEF5 Length = 324 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 10/221 (4%) Query: 86 LLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQ 145 +L++LGAG W + L+AD+ +A G + R L DGS + L + SA F + Sbjct: 101 VLVMLGAG-----WFGDLPLRLQADHLSAVGELQRFDLADGSHIVLGSDSAISSDFSNAR 155 Query: 146 RTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL 205 R ++L GE+ + D RP + +T +GT F+V +Q + + V++ V Sbjct: 156 RRIQLLRGELYVEAFHDP-SRPLTIEAGSATVTVVGTRFSVSRQADGVTVAVREGRVR-- 212 Query: 206 LASAPAQKRIVNAGESLQFSASEFGAVKPLDDE-STSWTKDILSFSDKPLGEVIATLTRY 264 LA Q+ ++ AG Q + P E SW LSF D PL +V+ L RY Sbjct: 213 LADENGQQSLLQAGNWQQLQGHRLLPLNPEGSERQLSWINGRLSFQDAPLAQVLQELGRY 272 Query: 265 -RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 R +L + A ++SG + L + AI+ +++ ++ Sbjct: 273 HRAPILLFNADAAQQKVSGNYQLDDPQAIVRALSKVTATEL 313 >UniRef50_A3RU50 FecR protein n=4 Tax=Ralstonia solanacearum RepID=A3RU50_RALSO Length = 274 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 113/257 (43%), Gaps = 30/257 (11%) Query: 68 ASRALHDTRLTRRHVM----------KGLLLLLG--AGGGWQLWQSETGEGLRADYRTAK 115 AS A H L +R M +G L++ G A G LW R Y TA Sbjct: 13 ASLARHHAALRQRFTMPPSPARTPRRRGPLIVAGMVAALGALLWADPAFHTQR--YATAA 70 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G + L DG+ +TLNT++ A+V + R VRL GE A+ +PF V Sbjct: 71 GARQQIDLSDGTAVTLNTRTVAEVEWHLRSRQVRLVEGEALFDVAR--AWQPFIVRAGGT 128 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS------APAQKRIVNAGESLQFSASEF 229 ++ +GT F VR+ D + V + V V AS P Q AG +A + Sbjct: 129 KVRVVGTAFNVRRADPRVTVTVLRGRVHVEDASGDAVLLGPRQAADTGAGTLNAHTAPDP 188 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKN 288 A + +W L F PL + +A + RYR V DPA+ L++SG F Sbjct: 189 AA-------AVAWKDGKLLFDHTPLAQAVADINRYRVAPVTLADPALERLQISGVFDNAR 241 Query: 289 TDAILNVIAQTLPVKIQ 305 TD +L+++ LPV I+ Sbjct: 242 TDTLLDLLPSILPVTIR 258 >UniRef50_B4RFZ1 Transcriptional regulator n=2 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFZ1_PHEZH Length = 328 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 140/331 (42%), Gaps = 41/331 (12%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 RQ L A+ W+A L+ V+ +++W ++D DN A+ VE ++ + D Sbjct: 10 RQEL-EAAEWFAKLNKLSVTTDALRTFREW-KKDPDNAAAYAAVERTWSEARSLRSDPDI 67 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLR-----------------ADYR 112 R D L RR A +LW + L Y Sbjct: 68 RRAADEALARRPARPA------ASRASRLWPAAVVAALLVAVLLVGAAAVALTQRPVSYA 121 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 TA G LEDGS L LNT +A V F R + L G+ A D RPF V Sbjct: 122 TAHGEQRLVVLEDGSRLRLNTDTAVTVSFRGEARRLALKRGQAFFEVAHDP-SRPFIVTA 180 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS------APAQKRIVNAGESLQFSA 226 + ALGT F V ++++ ++ + + V V AP+Q +V + L Sbjct: 181 GDTTVRALGTRFEVWRRNDGARVTLVEGKVSVTRGQQAPTVLAPSQS-VVATRDGL---- 235 Query: 227 SEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLR-LSGTFP 285 + +V P+ ++T WT L+F D PL E +A + RY + DPA R +SG F Sbjct: 236 TPVTSVDPV--QTTGWTTGRLTFRDTPLSEAVAEINRYSAQTIALDPAAPASRPVSGVFD 293 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINISP 316 +TDA ++ + L ++ + R I +SP Sbjct: 294 AGDTDAFVDAVGVLLNLEAERQGRI-IRLSP 323 >UniRef50_B4WCX7 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCX7_9CAUL Length = 294 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 112/247 (45%), Gaps = 23/247 (9%) Query: 70 RALHDTRLTRRHVMKGLLLLLG-AGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 RA + RR + G L G A GG LW+ + Y T G L DGS Sbjct: 51 RAATGRVVNRRAWIAGGTLAAGVALGGVFLWRQQP-----VIYETEVGERRTIALPDGSQ 105 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGE--IAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 +TLNT S RF +R V L GE A+ DA PF VL+ ++ GT F V Sbjct: 106 VTLNTASRISARFAGREREVVLESGEAFFAVAHQDDA---PFDVLSHAARIRVTGTRFNV 162 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRI-VNAGESLQF-SASEFGAVKP-----LDDES 239 + FT +D+ Q V V A+ P+Q R+ + AG++++ SA + G V +DD Sbjct: 163 YRHATFTDVDLLQGGVAVGPAAEPSQARLHLRAGQAVRLSSAGDPGPVSAAQGGRIDD-- 220 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQ 298 W + +SF L + + RY N LR +P++ L + G F +T A + + Sbjct: 221 --WRQGRISFDRTSLRAAVVEMNRYSNAPLRILNPSLNALEIDGVFEAGDTAAFAKALGR 278 Query: 299 TLPVKIQ 305 V ++ Sbjct: 279 LHGVSVR 285 >UniRef50_Q1NHX0 Putative transcriptional regulator, putative n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHX0_9SPHN Length = 318 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 142/329 (43%), Gaps = 35/329 (10%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQD--NQWAWQQVENLRNQLGGVP 64 +S Q + A+ W A L ++P ++A W D WA + R +L Sbjct: 5 ESSAQIEQQAAIWAARLDARALTPAEQADLDAWLSGDSRRLGAWAMARAALARVELAQAS 64 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGE---GLRAD---YRTAKGTV 118 G A LTRR +++G G L S G GL +D Y T KG + Sbjct: 65 GSTHP-AARIPWLTRRFLLRG--------AGMALAASAVGAVALGLWSDGDHYATGKGQM 115 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 R L DGS++ LNT S DV+F QRT+ L GE AKDA RPF V+ ++ Sbjct: 116 LRIALSDGSIVNLNTASEMDVQFTDRQRTIILRGGEALFAVAKDA-SRPFVVIAGDARVR 174 Query: 179 ALGTEFTVRQQDNF-TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 A+GT FTVR + + V + VEV A A A R+ ++ + A P++ Sbjct: 175 AVGTAFTVRHEARRPVDVIVSEGVVEVSEARA-APVRVSQGTRAV----VDPRAATPIET 229 Query: 238 ESTS---------WTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLK 287 + + W + ++F D L A RY + ++ DP +A ++G F Sbjct: 230 AAIASDTIEQELYWREGKIAFRDTTLASAAAQFARYNDEHIVIADPVLAQETITGLFIAN 289 Query: 288 NTDAILNVIAQTLPVKIQSITRYWINISP 316 + +A++L V + I I +SP Sbjct: 290 DPRGFAQAVAESLGV-VTRIEAGRIILSP 317 >UniRef50_C6DD79 Anti-FecI sigma factor, FecR n=5 Tax=Pectobacterium RepID=C6DD79_PECCP Length = 317 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 88/315 (27%), Positives = 136/315 (43%), Gaps = 17/315 (5%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + D + + A+ W L+ + +QE +Q W QD ++ A +Q L + LG + Sbjct: 1 MNDYPPEIQQQAARWAIRLAEAPLDDEQELAFQHWLAQDPRHRHALEQAGMLWHGLGSLS 60 Query: 65 GD---VASRALHDTRLTRR-----HVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKG 116 + V T L +R LLLLG G W S+ LR+DY A Sbjct: 61 AEQRQVLQPQPPATFLIKRVNRATQWKIAALLLLGFSVG-TTWISDGILMLRSDYH-AVH 118 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQ 174 V L DGS + ++ SA + + +R V L G T A Q RPF V Sbjct: 119 QVKHVTLPDGSEVDMDAGSAISLAYTPQERRVTLLQGSAWFTVAPTTTQEKRPFLVDAAS 178 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G ALGT+F V+ T + V +H+V+V +A Q ++ ++ +++ + Sbjct: 179 GTTQALGTQFIVQNASQTTTVGVVEHSVQV---TANGQSLQLDEQQAARYTEQGMTRLPG 235 Query: 235 LDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLR-LSGTFPLKNTDAI 292 + E W + +L F +PL VIA + +YR G + + R +SG F L D Sbjct: 236 WNSRERGDWRRGLLIFDQQPLAVVIARINQYRAGTIVIPTSALRQRQVSGIFSLNELDGA 295 Query: 293 LNVIAQTLPVKIQSI 307 L IA L K S+ Sbjct: 296 LQTIATELGAKTVSL 310 >UniRef50_B1ZVB4 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZVB4_OPITP Length = 348 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 87/325 (26%), Positives = 134/325 (41%), Gaps = 65/325 (20%) Query: 19 WYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTR-- 76 W A L G ++P + A + +W E D + A+ ++E RALH+ R Sbjct: 21 WLARLDGG-ITPDERAEFFRWREADSRHAAAFARLEQ------------TWRALHELRSY 67 Query: 77 --LTRRHVMKGLLLLLGAGG------------------GWQLWQ------SETGEGLRAD 110 L R H + LL G GW LW G G Sbjct: 68 RPLARLHPDRDLLAPPPRGVFRRRFPMIALAAAAAVIIGWTLWSWAPRSLQNGGSGATQI 127 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 + T G R L DGS++ LN QS V + +R ++L GE AK+ RPF V Sbjct: 128 FATTSGGYERLTLSDGSVVELNGQSEVRVAYRPEERRIQLTRGEAHFIVAKNH-ARPFIV 186 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEV-----------LLASAPAQ-----KR 214 + + A+GT F VR D T++ V + V++ +APA + Sbjct: 187 TADKVAVRAVGTAFDVRLADRATEVLVTEGRVQLDHPGSRNPPATGAVAAPATLDAGWRA 246 Query: 215 IVN--AGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRY-RNGVLRC 271 +V +GE L A+ E+ +W + L F++ PL EVIA ++ R + Sbjct: 247 VVGHASGEPLALEQLSAAAIS----EALAWQRPRLVFTETPLREVIARFNQHNRVQLALA 302 Query: 272 DPAVAGLRLSGTFPLKNTDAILNVI 296 DP + L + G+F +N DA + ++ Sbjct: 303 DPELGSLPVGGSFRAENVDAFVRLL 327 >UniRef50_B6YYD9 FecR protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYD9_9RHOB Length = 333 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 12/291 (4%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL--RNQLGGVPGDVASRALH 73 A +W+ L E S +Q ++ W+ + +Q + ++E + + G++ + + H Sbjct: 28 ALNWFLKLQ-EDTSDEQRKQFSAWFNTSEQHQQEFARLEEIWGASAFRKAVGELKTVSAH 86 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG-----LRADYRTAKGTVSRQQLEDGSL 128 T+ H K L G + L T L+ADY T + + L DGS Sbjct: 87 PP-ATKTHPQKTFRKLTGVAAAFALMIGATQFSDWWIYLQADYTTQSAEMRQISLPDGSS 145 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ 188 + +N+++A + F+ QR V + GE DA QRPF+V G++T LGT F+V Sbjct: 146 MLMNSETAVALDFEGSQRHVHILRGEAYFDVLHDA-QRPFQVTGGFGEVTVLGTAFSVLA 204 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-ESTSWTKDIL 247 ++ +++ VE+ A+ R + GE + S K ++ E +W + L Sbjct: 205 SRTEDRVVLERGRVELTRANDAETARELKPGELSRISKIGIEESKKINPAEVLAWREGRL 264 Query: 248 SFSDKPLGEVIATLTR-YRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 D PL + + + R Y + + A+ +R+SG F N + +A Sbjct: 265 VLEDVPLSKAVEEIERYYSSSIFITSSALRDIRVSGYFKTDNLIEAIETLA 315 >UniRef50_Q7WE93 Inner membrane sensor protein n=2 Tax=Bordetella bronchiseptica RepID=Q7WE93_BORBR Length = 344 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 37/293 (12%) Query: 33 EARWQQWYEQDQDNQWA-------WQQVENLRNQ-LGGVPGDVASRALHDTRLTRRH--- 81 +AR++ W EQD ++ A W ++ L+ L PG TRRH Sbjct: 53 QARFRNWLEQDPRHRPAYDACARDWARLAPLQTHYLATRPG------------TRRHRGA 100 Query: 82 ----VMKGLLLLLGAGGGWQLWQSETGE-----GLRADYRTAKGTVSRQQLEDGSLLTLN 132 L+L++ GG WQ+ T G R + T + ++ DG+ + ++ Sbjct: 101 WRAACALALVLVVTTIGGLA-WQAHTYADFSLLGAR-QFDTPLEQTAALRMRDGTRVDMD 158 Query: 133 TQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF 192 + V +D +R V L G A+D+ QRPF + T G++ LGT F V++ + Sbjct: 159 VGTTLTVAYDDARREVVLESGAAFFDVARDS-QRPFLIRTPAGEVHVLGTAFEVQRLADG 217 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWTKDILSFSD 251 ++V + V + +PA ++ G+S++ S F AV+P+ ++ +W + L F + Sbjct: 218 LLVNVARGHVRIAAPESPAGVELLT-GQSVRLRQSRFDAVRPIGVNQVAAWRHNRLVFDN 276 Query: 252 KPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 + LGEV +TR + + DPA A L ++ L + L + + L V + Sbjct: 277 RTLGEVAQAITRRGDWTVHVDPAAARLPITLAVQLNDVANSLQALPEILAVDV 329 >UniRef50_B0KF87 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KF87_PSEPG Length = 314 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 13/175 (7%) Query: 105 EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK--D 162 +GL ADY+T G V L DGS L L ++S + +D +R VRL +GE + + + Sbjct: 95 QGLGADYQTGYGEVRHVTLGDGSQLVLGSRSILSIAYDGQRRMVRLKHGEAVFSPSPVGE 154 Query: 163 ALQRPFRVLTRQGQLTALGTEF--TVRQQDNFTQLDVQQHAVEVLLASA----PAQKRIV 216 A RPF V T +TA GT + V + D + V QH+VE+ L S + ++ Sbjct: 155 AEPRPFTVSTPGATITARGTRYLVAVDKDDRSGWVGVLQHSVEINLVSHGLDDASASAVL 214 Query: 217 NAGESLQFSASEFGAVKPLD---DESTSWTKDILSFSDKPLGEVIATLTRYRNGV 268 G+SL F +KPL+ +E SW + + + L + + L RYR G+ Sbjct: 215 QQGDSLYF--GPHAGLKPLEQSPEELASWQEGRVVLRQQTLAQAVEQLGRYRAGL 267 >UniRef50_B4WC07 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WC07_9CAUL Length = 325 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/298 (29%), Positives = 132/298 (44%), Gaps = 31/298 (10%) Query: 8 SRRQALRS-ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 SRR +R+ A+ W + E + Q W D +++ A+QQV L G Sbjct: 7 SRRDRVRAEAAVWLTRIQRETGVEESRQALQDWLALDPEHRLAFQQVTETWEFLPGAAAL 66 Query: 67 VASRALHDTRLTR-----RHVMKGLLLLLG------AGGGWQLWQSETGEGLRADYRTAK 115 ++ + R +R R ++ L+ LG A G + + + Y T + Sbjct: 67 MSPKHSAPARSSRGSAPRRSAVRPALVGLGLAACVLAAVGIMVIKGGS------VYVTEE 120 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G L DGS LTLNT S A V + A +R VRL GE A A D PF V+ Sbjct: 121 GQHRAMTLADGSRLTLNTDSRAKVIYSATERRVRLDRGEAAFDVAHDPAH-PFVVVAGTT 179 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQ--KRIVNA---GESLQFSASEFG 230 ++ ALGT F VR+Q + + + + V++ A A A+ KR++ G+ LQ + Sbjct: 180 EIRALGTAFVVRRQGDRVSVTLVRGKVQISGAGADARGAKRVLATLIPGQRLQVAPQ--- 236 Query: 231 AVKPLDDES----TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTF 284 A LD S T+W + + F L E + RY + D V+GLR+SG F Sbjct: 237 AQPQLDTPSIEMVTAWEQGEVIFESATLAEAANEMNRYGPIKVTVDADVSGLRISGVF 294 >UniRef50_B4SMM9 Anti-FecI sigma factor, FecR n=3 Tax=Stenotrophomonas RepID=B4SMM9_STRM5 Length = 308 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 4/156 (2%) Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RTA G + + L DGS + L+ S VR DA +R ++L G+ A DA RPF+V Sbjct: 98 RTAAGEIREETLRDGSHMLLSPGSEVHVRVDAQRRQLQLQRGQAWFKVAADA-DRPFQVH 156 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T QG +TALGT F + Q + + + V +H+V V ++ Q + G+ L+F+ + Sbjct: 157 TPQGTVTALGTAFDLAVQGDSSVVTVTEHSVRVESGASSVQ---ASEGQQLRFNGNTPAI 213 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG 267 D +W + L + PL EV L R+ G Sbjct: 214 ATEADSSVLAWRERRLHWVSAPLAEVTRGLDRWHGG 249 >UniRef50_Q1NEQ4 Two-component system sensor protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ4_9SPHN Length = 329 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 92/201 (45%), Gaps = 10/201 (4%) Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 A Y TA G + L DGS LTL+T + V A +R V L G A D +RPF Sbjct: 120 ATYETALGEIRTISLADGSQLTLDTATRVRVTLSASERKVSLERGRARFRVAPDG-KRPF 178 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL----LASAPAQKRIVNAGESLQF 224 V G + A T F V + + V + V++ AS PA R + AG++ Sbjct: 179 TVTVPGGTVVARSTLFDVSVERESPVVAVIEGRVDLTSTSDAASHPA--RTLAAGQTADL 236 Query: 225 SASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLR-CDPAVAGLRLSGT 283 ++ +P T W +L+ PLGE +A + RY +R DP +A L ++G Sbjct: 237 GNADMP--RPTLPAETQWVSGMLALDGGPLGEAVAAINRYNRIQIRLADPDLARLSVTGA 294 Query: 284 FPLKNTDAILNVIAQTLPVKI 304 F ++N DA +A T + I Sbjct: 295 FQVRNPDAFARAVAATFGLGI 315 >UniRef50_B0SVT6 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0SVT6_CAUSK Length = 324 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 8/204 (3%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y+T G L DG+ + L+ S VR R V + + AKD RPF + Sbjct: 119 YQTKPGETREVALADGTRIRLDAASTLTVRLGWRARRVEMADAQATFDVAKDP-ARPFLI 177 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEV---LLASAPAQKRIVNAGESLQFSAS 227 Q+ +GTEF +R D ++ V++ VEV L S P + + AG+SL Sbjct: 178 SVGDQQVRVVGTEFNIRHYDKTVRVTVRRGIVEVRQPALGSTPVARLV--AGQSLSHVEG 235 Query: 228 EFGAVKPLDDESTS--WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFP 285 +++ D + + WT+ + D+ LGE++A L R ++ PA+AG R SG Sbjct: 236 APRSIQTATDPNPAFAWTQGRMVCDDETLGEMVAYLNRRYPIPIKVSPALAGKRFSGVLE 295 Query: 286 LKNTDAILNVIAQTLPVKIQSITR 309 L + D ++N +A + R Sbjct: 296 LGDEDLVVNRLAGYFSASVHRTDR 319 >UniRef50_Q07N91 Putative FecR n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07N91_RHOP5 Length = 346 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 7/212 (3%) Query: 97 QLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIA 156 LW S G ADYRTA G + D + +NTQ++ R + L GE+A Sbjct: 133 HLWPSLAELG--ADYRTATGEQRQVGFADAVSVQMNTQTSIAARTPDGAPGIELISGEVA 190 Query: 157 ITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIV 216 +T A PF V+ G++TA F++R+ D L V V S + + Sbjct: 191 VTIGP-AASSPFVVVAGAGRITAQHGTFSLRRDDAVASLTCLDGEVAV---SCDGRSLTL 246 Query: 217 NAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAV 275 A + + + + G V D E+ +W +L F D PL +VI + RYR G ++ D A+ Sbjct: 247 GAAQRIAYDSRGLGDVAAADPEAVAWRDGMLVFHDMPLSKVIDEVNRYRAGKIVLLDSAL 306 Query: 276 AGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 ++ F L D ++ I ++++ Sbjct: 307 GRRTVTARFELSRLDTVMLQIRHVFKATVRTL 338 >UniRef50_Q21KS4 FecR protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KS4_SACD2 Length = 320 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 16/169 (9%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 ++TAKG L DGS + LNT SA DV + + QRTV L GE AKD +RPF V Sbjct: 110 FQTAKGQQLHIDLNDGSKVLLNTSSALDVAYTSSQRTVSLLQGEAFFDVAKDT-KRPFDV 168 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA-------SAPAQKRIVNAGESLQ 223 T QG + +GT F V+ T+LD +E +A S Q ++ + Sbjct: 169 ETHQGTVRVVGTRFAVQH----TELDTVITVLEGKVALGDKSDSSIFEQAVLLTPNQQTT 224 Query: 224 FSASEFGAVKP--LDDEST-SWTKDILSFSDKPLGEVIATLTRYRNGVL 269 F+ ++ G +KP +D E SW K L F +PL +V+ L RY + V+ Sbjct: 225 FAETKLG-LKPKVIDAEKNLSWRKQHLVFRGQPLRDVVEELNRYSSTVI 272 >UniRef50_B1KES8 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonadales RepID=B1KES8_SHEWM Length = 354 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 91/346 (26%), Positives = 154/346 (44%), Gaps = 49/346 (14%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG--GVPGDV 67 Q L AS W A + E + ++EA QW D +N ++ + +++ G D+ Sbjct: 15 EQRLDIASDWIAKMDRELTAEEREA-LAQWLHCDVENLHVLLEIAQMWDKMDELGRLSDI 73 Query: 68 ASRALHDTRLTRRHV---MKGL---LLLLGAGGGWQLWQSE------TGE-GLRADYRTA 114 +A + TR+ M G+ +LL + G +Q Q TG +++ Y+TA Sbjct: 74 FPKA----KPTRKKTPVWMGGIAASILLFLSIGLYQFAQDVEPNAQVTGVIAMQSSYQTA 129 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G + L D S+L LNT S V++ A++R + L GEI I A D RP VL Sbjct: 130 VGESNTINLPDDSILVLNTNSFVQVKYTANERIIELQRGEINIEVAHDK-SRPLSVLAGG 188 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVL----------------------LASAPAQ 212 + A+GT F V + + +L V V V+ LA A + Sbjct: 189 KVIRAVGTAFNVDVRPSGVELIVTDGKVLVVKKSAEAFLKESHADQPKLMGTALAVAKDE 248 Query: 213 KRIVNAGESLQFSASEFGAVKPLDDEST-SWTKDILSFSDKPLGEVIATLTRYRN--GVL 269 + ++N E L AS+ V P + + SW L F + L E +A ++RY + L Sbjct: 249 RVMLNNREPLPSVASK---VAPGEIATKLSWRTGNLIFRGESLEEAMAEISRYTDIHFEL 305 Query: 270 RCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 D + ++++G F + + +LN++ Q V + ++R I ++ Sbjct: 306 ADDENLKKIKVAGMFKTGDVNGLLNILDQNFNVSHEKLSRNNIKLN 351 >UniRef50_Q5R0S8 Iron-dicitrate sensor, membrane component n=1 Tax=Idiomarina loihiensis RepID=Q5R0S8_IDILO Length = 319 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 5/202 (2%) Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 T + QL DGS L L S V + QR +R+ G+ + AKD +RPF V Sbjct: 121 TENTHQLSDGSALQLQLSSEVMVNYSEQQRDLRIESGQAYFSVAKDK-KRPFVVSVGDAS 179 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 +TA+GTEF + + + + V + VEV A + ++ AGE ++ S FG VK +D Sbjct: 180 VTAVGTEFNIDRGTDQIDVTVYEGIVEV-QAEQESFPVLLKAGEKMRLSRGRFGVVKKVD 238 Query: 237 -DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILN 294 + W + S++ L +I L R+ + ++ DP + ++G F L +T+ L Sbjct: 239 VNNLIDWRSGWIEISNENLTYLIERLNRHSSTPIVLADPNLGSREVAGRFRLNDTEQTLK 298 Query: 295 VIAQTLPVKIQSITRYWINISP 316 +++Q + ++ + + I ++P Sbjct: 299 LLSQMYALNVEYLPQQ-IRLTP 319 >UniRef50_A9CF44 Two component sensor kinase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CF44_AGRT5 Length = 331 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 83/317 (26%), Positives = 133/317 (41%), Gaps = 39/317 (12%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQ--------------QVENLRNQLG 61 A+ W L G P+ +A +++W Q+N+ AW+ + +NL Sbjct: 19 AADWLLRLQGGATEPRLKAEFERWLAASQENRLAWERTCKIWRNLGLVEPEFKNLWEDAA 78 Query: 62 GVPGDVASRALHDTRLTRRHVMK------GLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 +PG A R + RH L L++ L+ L ADY+T+ Sbjct: 79 HLPGKAAINPTR-RRWSVRHYAGAAVAAASLCLVV-------LFIPTFSVRLEADYQTST 130 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 + LEDGS + L SA F +RTV++ GE D RPF V + Sbjct: 131 AEMRTITLEDGSTVELAAASALSADFRDGRRTVKVLKGEAFFDVVPDK-ARPFVVEAKNV 189 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK-- 233 + LGT F V D TQ+ + +VE +AP + + GE L A+ GA++ Sbjct: 190 TVQVLGTAFDVDLTDGVTQVALAHGSVEASFRNAPPTRLV--PGEMLVVDAA--GAIRKE 245 Query: 234 --PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTD 290 P++D W K L D +G V+ + RY L D +A +++G + L++ D Sbjct: 246 NVPVEDIG-GWRKGELYVVDATIGSVVEQIQRYHPAWLTMADKRLAEQKVTGFYDLRDPD 304 Query: 291 AILNVIAQTLPVKIQSI 307 L + + K+ +I Sbjct: 305 RALEALVEPYSGKVHAI 321 >UniRef50_A8EUR0 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUR0_ARCB4 Length = 319 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/313 (20%), Positives = 140/313 (44%), Gaps = 14/313 (4%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA- 68 ++ ++ + ++ + + +QE + W +++ +++ A++ V+ ++ + D Sbjct: 2 KENIKEKAAYFFTCKKDGFTKEQEIEFNSWIDENIEHKKAYENVQRVQQMFLSLSKDTKE 61 Query: 69 --SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG-----EGLRADYRTAKGTVSRQ 121 S+ +H R K L + A + + S G G++ + T K + Sbjct: 62 KISQEVHQGIKRERIFRKTQFLKIAASILFVIVVSFFGIEYLNFGIKHSFTTNK-EIKNI 120 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 L DGS + L+ ++ D+++ ++R V + G++ AK+ +PF V ++ LG Sbjct: 121 VLPDGSRVILDAKTKVDIKYFENKREVNIISGKVLFDVAKNP-NKPFIVNANMIKVEVLG 179 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVL--LASAPAQKRIVNAGESLQFSASEFGAV-KPLDDE 238 T F V+ +++ +DV V+V + + I+ +G+ + F + K +D + Sbjct: 180 TNFEVKNEEDKISIDVISGKVKVEENKDNKFEELAILTSGKCISFDKENNKIILKDIDIK 239 Query: 239 ST-SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + SW IL F D L + I +Y++ + D + +SG+F + D L ++ Sbjct: 240 NIASWKDGILFFQDYSLEKSINEFRKYKDINIFIDNNIKKYMISGSFKIDEFDKFLFALS 299 Query: 298 QTLPVKIQSITRY 310 + +KI Y Sbjct: 300 KIYSLKIDRKDNY 312 >UniRef50_B0T2B1 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0T2B1_CAUSK Length = 359 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 88/324 (27%), Positives = 141/324 (43%), Gaps = 47/324 (14%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQ-------WAWQQVENLRNQLGGVPGDVA 68 A+ W L+ ++ ++AR Q W+E D+ ++ AW+ VE ++ PG +A Sbjct: 17 AALWCVRLADADLTLAEQARLQAWFEVDEAHRGLLDEAVIAWRAVEEQASR----PGIIA 72 Query: 69 SR--ALHDTRLTRRHV-----------MKGLLLLLGAGGGWQLWQSETGEGLRAD-YRTA 114 R AL D R +R L+ A WQ+ R D YRT Sbjct: 73 LRGEALEDLRRAQRERWARPERRPALWTALAASLVVAVAAGAAWQAN-----RPDVYRTT 127 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 +G +L DGS +L++ + VR+++ +R + L G + AKD L RPF V Sbjct: 128 EGERRIVELADGSRASLDSATVLKVRYESGRRRLWLDSGRAKFSVAKDPL-RPFSVAAGD 186 Query: 175 GQLTALGTEFTVRQ----------QDNFTQLDVQ----QHAVEVLLASAPAQKRIVNAGE 220 + A GT F+V + + + LD + AV V + APA + + E Sbjct: 187 KLVVATGTVFSVERLTGQMRVVLYEGHVAVLDDKTGRADTAVPVKIGGAPADRLLTPDHE 246 Query: 221 SLQFSASEFGAVKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGL 278 + + + V LD + +W L F D+P+ + + RY L+ DP V L Sbjct: 247 LVTSTQTNATVVSQLDPVRAKAWENGQLVFQDEPMDLAVERVNRYARDKLKIGDPGVGRL 306 Query: 279 RLSGTFPLKNTDAILNVIAQTLPV 302 R+SG F +T A ++ + LPV Sbjct: 307 RISGVFTSGDTGAFVDGVTAVLPV 330 >UniRef50_A8EV42 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EV42_ARCB4 Length = 324 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 62/309 (20%), Positives = 147/309 (47%), Gaps = 25/309 (8%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQ---VENLRNQLGGVPGDVASRAL 72 A++W +L E ++ +Q+ W +D +N+ A+ + V + L + ++ + Sbjct: 11 ATYW-LILEKEGLNNEQKENLNLWL-KDDNNKKAYNRIKFVHQMSKSLSKENSQILTQEI 68 Query: 73 HDTRLTRRHVMKGL--------LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 H+ +++++ + + +LL+ +++++ + T K ++SR+ L Sbjct: 69 HN-KISKKKLSSRIKHFSSAAAILLIFCFFAFKVYEYNFKVQFSQNLMTDKSSLSRE-LP 126 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DGS++ ++ ++ ++ + +R V L G AKD +PF + ++ + +GT+F Sbjct: 127 DGSIIFVDAKTNLNIEYFNGKREVNLINGRAMFEVAKDE-NKPFIIKSKDINIEVVGTKF 185 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKR---IVNAGESLQFSASEFGA---VKPLDDE 238 V +++ T ++V+ V+ + K+ I+ +SL +S +E GA +K ++ E Sbjct: 186 EVIHKEDTTTINVENGVVKTYYSKYFFDKKNQAILTKAQSLTYS-NEIGAISQIKIIEPE 244 Query: 239 STS-WTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + W ++ + F L E + ++Y + VL + ++G F D + I Sbjct: 245 KIALWRENKILFDKTTLKEALEEFSKYSDISVLFLSKELENYSITGEFSSTQLDIFIKTI 304 Query: 297 AQTLPVKIQ 305 ++ P+KI+ Sbjct: 305 SKIYPIKIE 313 >UniRef50_D0J1W8 Putative FecR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J1W8_COMTE Length = 386 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 16/227 (7%) Query: 93 GGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWY 152 G GW W + + Y KG L DG+ L ++T + A V +R VR+ Sbjct: 151 GIGWHQWMLQPT--FESSYVAQKGQQKLVTLPDGTELAMDTDTQAQVTMYRDRREVRIAD 208 Query: 153 GEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD-----NFTQLDVQQHAVEVLLA 207 G+I + A D ++PF VL ++T LGT F+VR + + V++ V V A Sbjct: 209 GQIMFSVAADP-KKPFHVLAGPARVTVLGTRFSVRYRSQGADAGAVNVSVEKGHVRVTSA 267 Query: 208 SAPAQKRI-----VNAGESLQFSASE-FGAVKPLDDESTS-WTKDILSFSDKPLGEVIAT 260 + A + + AG+ L+ S++ G V + S + W K ++ F + L + + Sbjct: 268 YSTANAKADLPVELLAGQGLRVSSNGVLGQVASVSPGSVALWRKGLVRFDNTSLADALLE 327 Query: 261 LTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 L RY G+ DPAVA + + G++ + ++ Q LPVK+ S Sbjct: 328 LERYGPTGLEIRDPAVAAMTIGGSYQIDRPGEFARMLTQILPVKLVS 374 >UniRef50_B0SYA7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0SYA7_CAUSK Length = 325 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 8/201 (3%) Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 A Y T G LEDG+ + LN S VRF+ H R VRL E AKD +RPF Sbjct: 114 ATYVTGVGEHKTIALEDGTRIELNAASRLTVRFERHARRVRLGDAEAFFDVAKDP-RRPF 172 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL--LASAPAQKRIVNAGESLQFS- 225 + Q+ +GT+F VR++D + VQ+ VEV L S R+ G+ L Sbjct: 173 LIEAGDTQVRVVGTQFDVRRRDGRVAVAVQRGLVEVRPDLQSGATPFRL-RPGQGLSHEE 231 Query: 226 --ASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTR-YRNGVLRCDPAVAGLRLSG 282 A + DE W + L + D+PL E++ L R + V D A +RLSG Sbjct: 232 GRADDARVAAVAVDEVMGWRQGRLIYRDRPLSEIVRDLNRLFPRPVKLGDDRAADMRLSG 291 Query: 283 TFPLKNTDAILNVIAQTLPVK 303 + A+++ ++ LPV+ Sbjct: 292 VLIVDEQGAMVDRLSHLLPVR 312 >UniRef50_A3UKH4 Transcriptional regulator, putative n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UKH4_9RHOB Length = 356 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 91/337 (27%), Positives = 139/337 (41%), Gaps = 53/337 (15%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVE---NLRNQLGGV 63 D+ R+A A+ W L P AR+++W D + A++Q E L + Sbjct: 14 DTHREA---AALWSERLREAGADPDLRARFEEWCGDDPAKREAFRQAEAAWRLARSVADE 70 Query: 64 P------GDVASRALHDTR----LTRRHVMKG-LLLLLGAGGGWQLWQSETGEGLR---- 108 P V SRA + + R V+ +L+ +G G W + GE + Sbjct: 71 PEMLELRNKVLSRAASERKPVFSAARLSVLAASVLVCVGFGFVLANW-AMPGESVEPSMV 129 Query: 109 ------ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD 162 +D+ T G L DGS +TL T S A V F +R V L G+ A + Sbjct: 130 IAEQAASDFETQIGERLTTPLADGSTMTLGTSSRARVAFSDQERLVELVSGQAYFDVAHE 189 Query: 163 ALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESL 222 R F VL ++TA+GT F VR + QL V V++ AP V+ G + Sbjct: 190 D-GREFVVLAAGRRVTAVGTAFEVRV--DSAQLSVTLVEGNVVV-DAPVS---VDQGAAG 242 Query: 223 QFSASEFGAVKPLDD-----------------ESTSWTKDILSFSDKPLGEVIATLTRY- 264 +F+ SE + P + TSW +L F D+PL +A + RY Sbjct: 243 EFARSERAELSPGEQLVQVADAPPSVATVDARRLTSWLDGLLIFEDEPLSAAVAEMNRYA 302 Query: 265 RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 R ++ D ++ LRLSG F + + +A+ P Sbjct: 303 RRPIVIADEQLSALRLSGAFSAGQSSGFVEALAEYFP 339 >UniRef50_Q7M9Y4 PUTATIVE TRANSMEMBRANE SENSOR n=1 Tax=Wolinella succinogenes RepID=Q7M9Y4_WOLSU Length = 320 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/284 (25%), Positives = 130/284 (45%), Gaps = 21/284 (7%) Query: 36 WQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTR-----LTRRHVMKGLLLLL 90 + +W +D+ +Q A+ + + L ++ +P + ++ R + R+ ++ L+ L Sbjct: 30 FARWLSEDEGHQQAFLEEKRLVEEVKALPREFLLEIKNEVRGRREQIKRQRILIKRLIPL 89 Query: 91 GAGG---GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRT 147 A G+ + E + Y S L D S ++L+ +++A+VR+ +R Sbjct: 90 SACMLLVGYLAFFMEIA-SFKQLYVATHKVQSDIALPDDSRISLDAKTSAEVRYYKSKRL 148 Query: 148 VRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA 207 V+L G+ A+ + + PF + T +G++ +GT+F V D+F ++ V + VEV Sbjct: 149 VQLSEGK-AVFDVRPNPKAPFIIETERGEIWVVGTKFEVINHDSFLRVSVSEGIVEVRSP 207 Query: 208 SAPAQKRIVNAGESLQFSA----SEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTR 263 A V GESL A SE + P D+ SW F L EV+ + Sbjct: 208 KDRATVLRVGRGESLSLDAKHQTSEIQKIDP--DKVASWQYGRYLFHQASLQEVLEEFGK 265 Query: 264 YRNGVLRCD---PAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 + + LR + +A L +SG+F + D L V+ PV+I Sbjct: 266 HID--LRVNIEGSKIASLPISGSFDVNRLDDFLKVLPLVHPVRI 307 >UniRef50_A6T0M6 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0M6_JANMA Length = 326 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 80/303 (26%), Positives = 134/303 (44%), Gaps = 29/303 (9%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL----------RNQLGGV 63 R A W L+ V+ ++QW Q++ + A+ Q ++ Q + Sbjct: 10 REAQAWVVRLASHAVTENDANAFRQWCAQNRAHATAFSQARSVWGAMRPAAMQLKQHEAI 69 Query: 64 PGDVASRALHDTRLTRRHVMKGLLL----LLGAGGGWQLWQS--ETGEGLRADYRTAKGT 117 D AS R RR + G + L +LW S E G ADY+TA G Sbjct: 70 RQDAAS----GVRKGRRAFLGGAVAASVAYLAFRPPMELWPSLGEVAAGFAADYQTATGE 125 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRT-VRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 + DG L+ +NTQ+ +V+ DA+ T + L GE I T + R V Sbjct: 126 QRSLAMHDGLLVQMNTQTRINVQADANNETDLELLSGEAEIQTDFNKENRVTVVAGGG-V 184 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ++AL F +R N + Q V+V A + ++AG+ L + A +FG + ++ Sbjct: 185 VSALRARFNIRYTGNNVCVTCLQGRVQVGQA---IHRATLDAGQQLTYRADDFGVPQAVN 241 Query: 237 DES-TSWTKDILSFSDKPLGEVIATLTRYRNG--VLRCDPAVAGLRLSGTFPLKNTDAIL 293 + T+W K +L F+ L EV+A + RYR G +LR + + ++ +F + D ++ Sbjct: 242 TSNVTAWRKRMLVFNQVALSEVVAEVNRYRPGKLILRSEE-LGRSKVQASFSIDRLDDVI 300 Query: 294 NVI 296 +I Sbjct: 301 ALI 303 >UniRef50_C5SKV9 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKV9_9CAUL Length = 319 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 4/197 (2%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y T KG L DG+ L LNT + V+ RTV L GE+++T A A Q PFR+ Sbjct: 112 YATHKGERQTITLADGTQLRLNTDTHLSVKMTRSARTVTLDKGEVSVTVAHKADQ-PFRL 170 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS-EF 229 LT + LT +GTEF V + + ++ V++ +E+ SA ++ + G + S + + Sbjct: 171 LTGKLTLTDIGTEFNVARFNGEVRVAVREGQIEMADHSAASRLLPGDLGTYREASGTRQL 230 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 V P E+ +W + + PL +V A L RY + + A LRL+ L + Sbjct: 231 AKVDPA--EAFAWQSSRAIYRNLPLSDVAADLNRYFEKPIIVEGDAAQLRLNAILTLDSQ 288 Query: 290 DAILNVIAQTLPVKIQS 306 A+ I + LPV ++ Sbjct: 289 TAVAGRITEFLPVDART 305 >UniRef50_C7JBI1 Two component sensor histidine kinase FecR/PupR n=8 Tax=Acetobacter pasteurianus RepID=C7JBI1_ACEP3 Length = 321 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 79/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEA---RWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 R+ ++A+ WY L R P E R+++W E D ++ AW + + + +P Sbjct: 4 RKTPAQAAAGWYLYL---REDPDDEGLKNRFKEWLESDPAHKQAWADMNTTASVMAEIPS 60 Query: 66 DV-ASRALHDTRLTRR-HVMKGLLLLLGAGGGWQ-------LWQSETGEGLRADYRTAKG 116 + S ++ + ++ + G LL G G + LRAD+ Sbjct: 61 FLHTSTSIAPAFVPQKPERVLGRRLLSGCGLALMAACAAMIFVAPDMLVRLRADHYAPVA 120 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 +L DGS + L Q+A + +A +R++ L GE D +R FRV T Sbjct: 121 ETRDVRLADGSEIILAPQAAISITMNASERSIHLLQGEALFNVHHDP-KRLFRVTTENAV 179 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS-ASEFGAVKPL 235 +T +GT F VR + T + V++ +V V+ +P R + AGE + S A+ V P+ Sbjct: 180 ITDIGTIFDVRMEGAATVVAVREGSVRVIARRSPVAGRDLRAGEWERVSGAASASGVVPV 239 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILN 294 +W +L ++ G +I L + + ++ D ++ R++GT+ L +A L Sbjct: 240 ATIG-AWRDGLLVARNETFGNMIGALRPWTSTRIILTDRKLSDKRVTGTYNLHQPEAALR 298 Query: 295 VIAQTLPVKIQSITRYWINI 314 I T + S W++I Sbjct: 299 QIVDTYGGHVSSWAS-WVDI 317 >UniRef50_Q3SUW8 FecR protein n=3 Tax=Rhizobiales RepID=Q3SUW8_NITWN Length = 337 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 3/191 (1%) Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 ADY TA G ++ L DGS + LNT SA + F +R V L GE D PF Sbjct: 130 ADYITATGGRAQVSLPDGSTMLLNTASAVSIDFTNGRRQVTLLEGEAFFDVRHDPAH-PF 188 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 RV G+ GT F VR + + + +++ VEV S ++ GE + +A Sbjct: 189 RVAAHYGETEVKGTAFAVRTESDQDTIVLERGRVEVSRLSDSGDHVELDPGEMVTATAKA 248 Query: 229 FGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPL 286 V D E +W + F ++ L V+ L RY +G V+ D V L ++G + L Sbjct: 249 LSVVARRDPSEILAWRDGRIIFENQRLAHVLDELRRYYDGIVIVADARVGDLVVTGNYRL 308 Query: 287 KNTDAILNVIA 297 + + +A Sbjct: 309 DDVPGAIRTLA 319 >UniRef50_B4WB56 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WB56_9CAUL Length = 326 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%) Query: 115 KGTVSRQ---QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 +GT R L+DGS + LN S F +R V L GE + AKDA +RPF V+ Sbjct: 117 EGTAGRSLQAALDDGSSVQLNGDSRVRTAFGPERRDVWL-SGEGFFSVAKDA-RRPFSVI 174 Query: 172 TRQGQLTALGTEFTVRQQD-NFTQLDVQQHAVEVLLASAPAQKRIVNAGESL--QFSASE 228 T ++TALGT F V ++ ++ V + VEV+ + P + +++NAG L + + Sbjct: 175 TATHRITALGTRFNVDERSGGAVEVTVLEGRVEVVPLNHPERGQVLNAGGRLLSDGATAR 234 Query: 229 FGAVKPLDDE--STSWTKDILSFSDKPLGEVIATLTRYRNGVLR--CDPAVAGLRLSGTF 284 GA++ LD E + WT+ + + L +++ L R G+ DPA++ R+SG F Sbjct: 235 AGAIERLDPEVRAPDWTEGWIDADNMSLADLLIELKRRSPGLEAEFADPALSRRRISGRF 294 Query: 285 PLKNTDAILNVIA--QTLPVKIQSITRYWIN 313 +L V+A Q L ++ + R I+ Sbjct: 295 AASRPQDVLTVVADMQDLTLRRDASGRLLID 325 >UniRef50_B3Y996 Anti-sigma factor n=5 Tax=Ralstonia solanacearum RepID=B3Y996_RALSO Length = 316 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 132/318 (41%), Gaps = 30/318 (9%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV-------PGDVA 68 A W +L S R+ W E + + + V L LG V P A Sbjct: 13 AIQWLVLLRSGMASEADRQRFAAWREANPAHA---EAVRRLEGGLGAVALPSVPMPHRQA 69 Query: 69 SRALHDTRLTR--RHVMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 +R L DT + +H + LL+ LGAG + L AD RTA +L Sbjct: 70 ARRLLDTPPSSPMQHARRALLVGGLGAGVAALVDLHMPLSDLAADMRTATAERRDFKLAG 129 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 G L LN +SA DV H VRL G ++ A +R RV + +GT Sbjct: 130 GHELRLNARSAVDVVPVVHGYDVRLRRG--SVLAMAGAWER-LRVTS------PVGTAEC 180 Query: 186 VRQQDNFTQLDVQQHAVEVLL-----ASAP-AQKRIVNAGESLQFSASEFGAVKPLDDES 239 R LD Q + +L SAP +V++G +F + ++ Sbjct: 181 ARGM-LCASLDAQGRMIVAVLDGSAALSAPEGAVTVVHSGGVHRFGPAGIEPLRRSARSV 239 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +WT+ ++ +PL +VI L Y G++ P+ A + ++G FPL A L ++ T Sbjct: 240 AAWTQGMVEVEHRPLADVIDALRPYHAGMIEVQPSAASMHVTGRFPLDPRRA-LQMLVDT 298 Query: 300 LPVKIQSITRYWINISPL 317 LP+ ++ I W+ IS L Sbjct: 299 LPLDVRYIAGLWVRISRL 316 >UniRef50_A6GRF6 Putative transmembrane sensor n=1 Tax=Limnobacter sp. MED105 RepID=A6GRF6_9BURK Length = 350 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 64/320 (20%) Query: 32 QEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD----VASRALHD-----------TR 76 +E ++ W + DNQ A Q E + L V + + ++ L D T+ Sbjct: 36 EEKAFRAWLADNPDNQSAMAQCEAVNATLQNVQAEQLAGLRAQLLIDKSRLNLSSPPKTK 95 Query: 77 LTRRHV--MKGLLLLLGAG--GGW-QLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTL 131 L + M L +LL A W Q W E + ++TA G + + +L DG+ +TL Sbjct: 96 LKPLQIAAMASLPVLLTAALSAAWYQFWPVEQHQ-----FQTAVGEIKKVKLGDGTQVTL 150 Query: 132 NTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF------- 184 +T + +V++ +RTV + G+ +D RPF V Q ++ LGT F Sbjct: 151 DTNTQLEVQYTRARRTVEISRGQARFDVHRDP-SRPFAVTVPQARVQVLGTVFDIRWTPD 209 Query: 185 ---------TVRQ---------QDNFTQLDVQQHAVEVLLASAPAQKRIVNA-GESLQFS 225 TV+Q DN+ + H E++ P Q+ ++A G++++ Sbjct: 210 HSGIEGPVITVKQGHVAVEHLINDNWASFNNYAHRTELI----PVQQLALDAKGKTIELR 265 Query: 226 ASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTF 284 + A+ WT ++ + L E++A L RY R D +A L++S +F Sbjct: 266 NLQASALP-------EWTSHRITVVNTRLDELLAELNRYSTIPWRLGDQELASLKVSASF 318 Query: 285 PLKNTDAILNVIAQTLPVKI 304 ++N AI V+ Q LP+K+ Sbjct: 319 DVRNKRAIAEVLNQALPLKV 338 >UniRef50_B4SL10 Anti-FecI sigma factor, FecR n=3 Tax=Stenotrophomonas RepID=B4SL10_STRM5 Length = 318 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 18/311 (5%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 S RQA R A W S + +Q+ Q+W + D + AW+Q + L +V Sbjct: 7 SPRQA-RQALRWVIRCSAGPLPERQQRTLQRWLQADPRHALAWRQQQAFWQGLDAAGPEV 65 Query: 68 ASRALHDTRLTRRHVM-----KGLLLLLGAGGGWQLWQSETGEGL---RADYRTAKGTVS 119 + AL + R + + L LL + L + L R+D R++ Sbjct: 66 LA-ALPELTTDREGLRPIAPRRRLPWLLASAAAVVLMVTAAPHALLLARSDLRSSDAP-R 123 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 QLEDGS L+ +A + FD QR + L G+ A +A RPF+V G++ Sbjct: 124 VVQLEDGSTAVLDAGTALALEFDGQQRRLHLLRGQAWFQVAHEA--RPFQVEAAGGRVRD 181 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 +GT F+V QD V + V+V Q+ ++AG+S F + L+D Sbjct: 182 IGTAFSVSIQDTTVTTQVSEGVVDVRPGDGSVQR--LHAGQSRAFRDGRWLQPVQLEDPE 239 Query: 240 --TSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 W + ++ + P + IA L RYR V A +R+SG F L+ + ++ + Sbjct: 240 AMAPWRRGEVAIDNLPAAQAIADLARYRRAPVWVLGGQGANVRVSGLFHLQQPETAIDAV 299 Query: 297 AQTLPVKIQSI 307 A +++Q + Sbjct: 300 AAQAGLRVQRL 310 >UniRef50_Q1G4X2 BhoE n=1 Tax=Bordetella holmesii RepID=Q1G4X2_9BORD Length = 305 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 11/304 (3%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R A+ W +G + + +++WY ++ + + L Q+ V G R + Sbjct: 7 RRAAQWVVRRNGVAPAALPDPSFEKWYRARDEHASCYDSIAELWQQMNHVDGPTLRRNVR 66 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 + RR + L+ G QSE + A+ + G V +L DGS + L+ Sbjct: 67 GAQ--RRRALAALVCATLVAGLLVSRQSEPPANVIAN---SNGQVQTARLPDGSEVVLDA 121 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV-RQQDNF 192 +A ++ F QR ++L G T A DA RPF VLT Q + TALGT + V R + Sbjct: 122 GAAIELDFRPQQRQIQLLRGRALFTVAPDA-ARPFVVLTPQARSTALGTRYEVDRTHADE 180 Query: 193 TQLDVQQHAVEV-LLASAPAQKRIVNA-GESLQFSASEFGAVKPLDDESTSWTKDILSFS 250 T + V + V V L P V A G+ +Q + + +WT+ +L Sbjct: 181 TVVSVLESHVRVECLPCGPGTPPAVLAPGQRVQAGQNGMQETRFDAASDQAWTEGLLLLR 240 Query: 251 DKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 D L + + L+RY + + LR+S +++ A L+ +A+ K++ + + Sbjct: 241 DVTLQDAVDQLSRYTGMRVWISTGLRELRISSLVTVQHPQA-LDTLARAAGAKVKRLGNW 299 Query: 311 -WIN 313 WI+ Sbjct: 300 AWIS 303 >UniRef50_D0XTN6 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XTN6_9CAUL Length = 316 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 4/175 (2%) Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T +G Q L DGS +TLN + A V R VRL GE A D RPF V Sbjct: 110 TPQGRQQIQVLADGSSVTLNGDTEARVALARRARDVRLDRGEAFFKVAHDP-SRPFTVHA 168 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF-GA 231 R +TALGT F V + + T++ V++ V V+ A+ P + +V AGES++ SA G Sbjct: 169 RDASVTALGTAFNVNRLADATEVTVREGKVRVVSAADPDRSAVVAAGESVRVSARGIEGR 228 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTR--YRNGVLRCDPAVAGLRLSGTF 284 ++ + W + ++ LG+++ L R R + +PA+A LRL+G F Sbjct: 229 LRFDPTAADDWRSGWIELNNGRLGDLVIELNRANARRPLRLGEPALAELRLTGRF 283 >UniRef50_D0J6Z7 Putative FecR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J6Z7_COMTE Length = 455 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 11/220 (5%) Query: 96 WQLW--QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYG 153 WQ W +T +A + +A+G R L DGS L L+ S+A V++ + +R V L G Sbjct: 224 WQQWLLYRQTHVQWQASWSSARGQQVRHGLPDGSSLLLDAASSARVQYFSARRMVTLVQG 283 Query: 154 EIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR-----QQDNFTQLDVQQHAVEVLLAS 208 A+D QRPF V ++T LGT F V Q + V V+V Sbjct: 284 AAFFEVARDE-QRPFMVEAAGVRVTVLGTRFGVDIEEGGQGGQRVSVQVASGRVQVQTLG 342 Query: 209 APA---QKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYR 265 A A Q + AG+ L+ + ++ +W L F+D LGE + L RY Sbjct: 343 ADARSWQTHELGAGQGLRLERGAVVRTQAASGDAAAWRDGELVFADTTLGEALQRLGRYA 402 Query: 266 NGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 L+ P A L LSG + A + + + LPV+++ Sbjct: 403 PFELQATPEAARLPLSGRVRIAQAHAWVRALPRALPVQVR 442 >UniRef50_B0T7R5 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0T7R5_CAUSK Length = 333 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 4/198 (2%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y TA G + L DGS++TL+T + + D R + L G A D PF+V Sbjct: 125 YTTAVGEIREVTLADGSVVTLDTATTLRAKVDGKFRRLALDKGGAYFAVAHDKAH-PFQV 183 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 Q+ GT F +D ++++ + +VEV A+ + G+ + + + Sbjct: 184 ALADRQVIVTGTHFATSLRDGRARVELLEGSVEVSQPRPSAEPVRLIPGDRVSYQVGDAV 243 Query: 231 AVKPLDDEST--SWTKDILSFSDKPLGEVIATLTRYRNGVLR-CDPAVAGLRLSGTFPLK 287 +P D T +W + L F D L EV+A L RY + +R DPA+ R++ PL Sbjct: 244 RREPRIDPVTAVAWRQRRLVFQDAALSEVLAELGRYTDARIRLADPALGRQRVTVMLPLD 303 Query: 288 NTDAILNVIAQTLPVKIQ 305 +++ A+ LPV ++ Sbjct: 304 GRGTVIDRAAKVLPVMLK 321 >UniRef50_Q47F02 FecR protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47F02_DECAR Length = 306 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 15/229 (6%) Query: 82 VMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ-LEDGSLLTLNTQSAADV 139 V+ LLL+ L G+ S G R + + A+ +RQQ L+DG++ L+ S + Sbjct: 77 VLTALLLISLATVAGFHAMLSSEG---RIETKVAE---TRQQVLDDGTIAELDADSQLLI 130 Query: 140 RFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQ 199 + +R V + +G++ A A RPF V + +GT F + + + ++ VQ+ Sbjct: 131 DYSPWRRLVVVLHGQVQFKVA--AGLRPFEVRAAGATVRDIGTTFNLYVRHDSARISVQE 188 Query: 200 HAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP-LDDESTSWTKDILSFSDKPLGEVI 258 VEV L A + R VNAG+ L + A++ P + D W + F PL EVI Sbjct: 189 GIVEVTL-DAGGKARRVNAGQQLDYLAADRALPWPKVADAVPPWREGRWVFEATPLDEVI 247 Query: 259 ATLTRY--RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 + R+ R VL DP + R+SG F + +L + LP++++ Sbjct: 248 EEINRHHARPAVL-ADPRLGSYRVSGVFEQVDRKGLLQALVAVLPLRLE 295 >UniRef50_Q1NGV4 Transcriptional regulator, putative n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGV4_9SPHN Length = 332 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 109/241 (45%), Gaps = 12/241 (4%) Query: 86 LLLLLGAGGGWQLWQSET----GEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRF 141 L LL+GA +Q+ ++++ G A + T G V +L DGS L L+T +A V Sbjct: 92 LGLLIGASILFQIMRTQSPQMAGAETPAAFVTKVGEVRSVKLADGSQLVLDTDTAISVAM 151 Query: 142 DAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHA 201 A +R + L G A DA RPF V ++ A GT F V ++N + + + Sbjct: 152 TADRRDIVLKRGRARFIVAHDA-ARPFFVRAGGMEVRATGTVFDVLFRNNVA-VHLIEGG 209 Query: 202 VEVLLASA---PAQKRIVNAGESLQFSASEFG--AVKPLDDESTSWTKDILSFSDKPLGE 256 VEV LAS PA+K ++ G L FS V P W + SF + P+ E Sbjct: 210 VEVELASQQTQPARKILLRPGHILAFSHGHESQSIVIPARRSDEQWVNGVKSFDNVPIRE 269 Query: 257 VIATLTRYRNGVLRCDPAVAGLR-LSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 VIA Y + + PA G R + +++ + + I+ L + I + + +S Sbjct: 270 VIAEANSYSDTRIELMPASLGDREIFADIHIRDIERVAEAISGFLDLDIDRTEKGRLILS 329 Query: 316 P 316 P Sbjct: 330 P 330 >UniRef50_B6QYF1 FecR protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QYF1_9RHOB Length = 331 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 83/323 (25%), Positives = 131/323 (40%), Gaps = 28/323 (8%) Query: 15 SASHWYAVLSGERVSPQQEARWQQ---WYEQDQDNQWAWQQVENLRNQLG---------- 61 +A W+ +L GE P+ W++ W+ QD +Q AW +V LG Sbjct: 17 AAISWF-ILLGEY--PEDLKLWEEFDDWFLQDPTHQEAWLKVSQTSEVLGQLELSSTEQG 73 Query: 62 ---GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 G+ + A + ++ G LL G + Q T L AD++T Sbjct: 74 SKQGIDVEPAFAFQNFFARSKMFFAAGFSFLLLLYIGLTVPQHLTV-WLYADHKTEVAQT 132 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +LEDGS + L+ SA D+ F R V L GE +D +RPF V Sbjct: 133 KEVELEDGSTIYLSAYSAIDLDFTDEMRKVSLLRGEALFDVDRDE-ERPFVVTAGDTTTK 191 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV---KPL 235 LGT F V + + + V+ V+V A + ++ ++ E G P Sbjct: 192 VLGTRFNVNKGLSAVSVGVEHGHVQV--AGSSDVNEVIELRDADWVRMHEDGHPDIRSPN 249 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 + +W + L D+ EV+ L R+ + VL DP + R++G F L LN Sbjct: 250 AEYIAAWQRGKLYVDDQSFEEVLFKLRRFMKTPVLVLDPRINSKRVTGVFDLSKPRQSLN 309 Query: 295 VIAQTLPVKIQSITRYWINISPL 317 I VK++ ++I IS + Sbjct: 310 AIVAAHTVKLRDFD-FFITISKI 331 >UniRef50_A4C3P5 Putative regulatory protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C3P5_9GAMM Length = 348 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 34/313 (10%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN + R + A++W +L E S Q + +Q W EQD +Q A+ +++ + Sbjct: 1 MNKITIPERNRIADEAANWLLILD-EDNSKQTQQAFQVWLEQDAHHQQAFSKLQIMWGLA 59 Query: 61 GGVPGDVASRALHD-TRL---TRRHVMKGLLLL---------------------LGAGGG 95 +P D + TR T RH +K L L + Sbjct: 60 VDLPTDCLTELPQPITRTWWQTLRHTIKNRLALTPLIWPVGSAAFALLVATFSFIAINQP 119 Query: 96 WQLWQSETGEGLRAD----YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLW 151 Q+ + T + + + Y+T + L DGS +TL S V F +R + L Sbjct: 120 QQIDNTLTTQIVAIEDPIIYQTTTASHQSWLLADGSQITLGADSKISVVFKPKKRAIELL 179 Query: 152 YGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA 211 G AKD +RPF V TA+GTEF V+ + + V + V V+ A+ P Sbjct: 180 QGIAVFKVAKDP-KRPFVVSHHGHSATAIGTEFVVKAHLSHVSVAVLEGKVAVMAANNP- 237 Query: 212 QKRIVNAGESLQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRN-GVL 269 + GE + +P + + W +L + D PLGEV+ + R+ + Sbjct: 238 NGLTLELGEQAELDQHSPLTKQPYNLQQELEWQSPLLEYHDVPLGEVLHDIRRFTTLNIY 297 Query: 270 RCDPAVAGLRLSG 282 D +A + SG Sbjct: 298 LADNDIAAYKYSG 310 >UniRef50_B4S0Z9 Putative regulatory protein n=2 Tax=Alteromonas macleodii RepID=B4S0Z9_ALTMD Length = 368 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 26/212 (12%) Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T G LEDGS L LNT S ++ F R ++L GE+ I AKD RP VL Sbjct: 147 TKPGEHKSISLEDGSTLWLNTNSQVNIAFTDTSRIIQLVKGELHINVAKDK-SRPLNVLA 205 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK----RIVNA---------- 218 + A+GT F V+ +L V + VEV AS K IVN Sbjct: 206 AGKAIQAVGTAFNVQYHRGDLELVVTEGVVEV--ASYTLNKANGESIVNPIIKPQARPLT 263 Query: 219 ---GE----SLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLR 270 GE SL S E + K + ++ SW + + F +PL +VI ++RY + V+ Sbjct: 264 LVQGEKSLLSLPNSTVETVSDKDIAND-LSWREGKIVFRGEPLIDVIEEVSRYTDKTVVL 322 Query: 271 CDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 D A+A ++++G F + DA++ +A L + Sbjct: 323 GDAALANMQVAGLFNTNDVDALIAALADNLQI 354 >UniRef50_D0XTD7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XTD7_9CAUL Length = 324 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 5/195 (2%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y TAKG QL DG+ + LNT S VR + R V + G+ A D+ RPF + Sbjct: 114 YATAKGESRALQLADGTHIDLNTDSHLSVRLEKDARRVTVHEGQALFDVAHDS-ARPFLI 172 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL--ASAPAQKRIVNAGESLQFSASE 228 + +GT F VR++D + V + VEV P Q R E ++ AS Sbjct: 173 TAGDETVRVVGTRFDVRRRDGQLSVTVLRGLVEVSTDGNDTPIQLRPGQMLEHVE-GASG 231 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLK 287 ++ W L + D+PLG +++ + Y + +R + A LR SG + Sbjct: 232 VSVRSVAAEDQVGWRSGRLIYRDQPLGRIVSDMNHYFDRPIRLEGENTATLRFSGVLIVD 291 Query: 288 NTDAILNVIAQTLPV 302 DA++ + +P+ Sbjct: 292 GQDAMVRRLTSLMPI 306 >UniRef50_B8H0G1 FecR family protein n=2 Tax=Caulobacter vibrioides RepID=B8H0G1_CAUCN Length = 329 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 4/197 (2%) Query: 104 GEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA 163 G+G + T G L+DGS L LNT+S +VR + +R VR+ GE A Sbjct: 115 GQGDVETFATGAGERRIVALKDGSRLELNTRSHLEVRISSRERHVRMLDGEALFMVAARP 174 Query: 164 LQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 +PF + ++ GT+F VR+ + T++D+ + VEV A R+ AG+++ Sbjct: 175 DHQPFTIDAGAARIKVTGTQFNVRKTSDQTRVDLLEGHVEVRGRDAEQTLRL-GAGQAVT 233 Query: 224 FSASEFGAVK-PLDDESTS-WTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRL 280 SAS V+ P D + + W ++ + L +A + RY R + +PA+ L + Sbjct: 234 VSASGATLVRQPADRAAVNDWRAGRVTLTRARLDAAVAHINRYARKPLTLAEPALGDLTV 293 Query: 281 SGTFPLKNTDAILNVIA 297 G F ++T +A Sbjct: 294 DGVFEARDTGTFARAVA 310 >UniRef50_Q2IVD7 Putative FecR n=2 Tax=Rhodopseudomonas palustris RepID=Q2IVD7_RHOP2 Length = 326 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 11/214 (5%) Query: 98 LWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAI 157 LW S + L +DYRT G R E G+ + LNT+++ D+R + L GE AI Sbjct: 112 LWSSLSE--LTSDYRTVTGQQRRVTTEGGATIELNTRTSVDIRLAGDTERIELIAGEAAI 169 Query: 158 TTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVN 217 TTA A R L GQ TA F +R+ + V V P R Sbjct: 170 TTAVRA-ARSIVALAGDGQATATDAMFNMRRDGPSVCITCVSGTVLVEQRGVPVTLR--- 225 Query: 218 AGESLQFSASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAV 275 + + ++ + G + +D T+W + IL+F D+PLG V+ + RY G ++ + ++ Sbjct: 226 QKQQVSYTDAGLGPLVEIDPAGVTAWQQGILAFHDEPLGRVVDEVNRYWPGKIIVANASL 285 Query: 276 AGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 A ++ F L D + + I Q V S+TR Sbjct: 286 AKRPVTARFKL---DRLEDAITQIQLVFHASVTR 316 >UniRef50_A1B6B7 Putative FecR n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B6B7_PARDP Length = 328 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 11/202 (5%) Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 L DGS +TLN SA V + R V L G++ A D RPF V + + ALGT Sbjct: 127 LPDGSRVTLNAMSAIGVDYSPQARQVVLIEGQVYFEVAADP-SRPFEVRAGEIGVLALGT 185 Query: 183 EFTVRQ--QDNFTQLDVQQHAVEV--LLASAPAQ-KRIVNAGESLQF-SASEFGAVKPLD 236 F V + + + V +H+V V L + P Q IV GE L SA GA P D Sbjct: 186 AFDVDRTLPGHALAVSVARHSVSVRRLDDAEPRQSPTIVREGERLVIPSAGPVGAPVPQD 245 Query: 237 DEST-SWTKDILSFSDKPLGEVIATLTRYRNG--VLRCDPAVAGLRLSGTFPLKNTDAIL 293 + +W I ++ L EVIA Y G V+R + + LR++ L+ + L Sbjct: 246 GSAVAAWRDGIHVAENRRLEEVIAAFRPYHRGWIVIRGE-RLKALRVNAVLDLRTPETSL 304 Query: 294 NVIAQTLPVKIQSITRYWINIS 315 + LP+++ ++RY I+ Sbjct: 305 AALEGGLPIRVCVVSRYLTVIT 326 >UniRef50_B1ZXK1 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXK1_OPITP Length = 342 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 88/340 (25%), Positives = 141/340 (41%), Gaps = 40/340 (11%) Query: 1 MNPLLTDSRRQALR------SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVE 54 MNP D + LR +A+ W + G ++ + A + W+ D + A+ +VE Sbjct: 1 MNP--GDVSAEILRDEHLTQAAAEWL-IRRGAGLNSAEAAEFAAWH-ADPRHAIAFARVE 56 Query: 55 NLRNQLGGVP-----------GDVASRALHDTRLTRRHVMKGLLLLLGAG----GGWQLW 99 ++ L +P D R + +R H + L A W W Sbjct: 57 KTQHLLFRLPQAPTAAALMAEADSLMRRARPAKPSRLHGWPTYVTLAAAACVTVALWLAW 116 Query: 100 QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITT 159 + E R + T G L DGS L LN S V F A +R V+L GE Sbjct: 117 PTLRPE--RDIFATLAGQRQSVTLNDGSTLVLNGDSEVQVAFAAAERRVQLHRGEAHFFV 174 Query: 160 AKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA-----SAPAQKR 214 AKD RPF V + + A+GT F VR++ N + V + V+V A A Sbjct: 175 AKDP-ARPFFVSADKVTIRAVGTAFNVRREANAIDVLVTEGKVQVTHGVTGANGAAALPI 233 Query: 215 IVNAGESLQFSASEFGAVKPLDDESTSWTKDI-----LSFSDKPLGEVIATLTRYRNGVL 269 + +GES+ A+ D + + K + L FSD PLGEV+A RY + Sbjct: 234 YLVSGESVHIDTLS-SAIAVASDAAPAGEKLLHSAPRLVFSDTPLGEVVALFNRYNQLQI 292 Query: 270 R-CDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 +P +A + G F N ++ + ++ ++ +I+ ++ Sbjct: 293 EIAEPELALRAVRGNFDADNAESFIALMERSGDAQIERVS 332 >UniRef50_B8KN81 CytoChrome c oxidase Cbb3-type, subunit I n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KN81_9GAMM Length = 332 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 16/211 (7%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y TA G L DGS + LNT + V + +R + L GE A D QR F V Sbjct: 113 YATAVGEKQTIVLPDGSTIQLNTATRLRVSYSPQRRELFLLAGEAFFDVAHDP-QRAFLV 171 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA----SAPAQKRIVNA---GESLQ 223 + + A+GT F++ + + ++ V + VE+ +A R++ G+ ++ Sbjct: 172 NAGERTVRAVGTAFSIHRDSDVLEVLVTEGVVELSRGAEGTTAHDTSRVLGKVLRGQRVR 231 Query: 224 FS-ASEFGAVKPLDDESTS----WTKDILSFSDKPLGEVIATLTRYRNG--VLRCDPAVA 276 + +E A + + DE + W + +LSFS +PL V+ + RY N V+R D ++ Sbjct: 232 LAREAEPSAPEAVSDEELTRELAWRQGMLSFSGEPLAVVVDEIGRYTNTRIVIR-DASIE 290 Query: 277 GLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 LR+ G F +TD +L+ + P++I + Sbjct: 291 NLRIGGYFRAGDTDTMLDALEAGFPIEIHRL 321 >UniRef50_Q1YSL3 Putative regulatory protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSL3_9GAMM Length = 348 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 44/335 (13%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + DSR + L A W A L + +S E Q W D +N+ + Q+ + +++ Sbjct: 6 ILDSRDRRLNEAGLWIAKLD-KGLSKDDEKSLQHWLAVDAENREVFLQMAEMWDKM---- 60 Query: 65 GDVASRA---LHDTRLTRRHVMKGLL------LLLGAGGGWQLWQSETGEGLRAD----- 110 D+ SR T +R ++ +L L+L G W + +A+ Sbjct: 61 -DMLSRLSELFPKTPEKQRRPVRSVLAIAASVLILTVVGLWGMMGISPDISGKANISELA 119 Query: 111 -----YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ 165 Y T+ G S L DG+ L LNT S + + +R + L GE+ + A+D + Sbjct: 120 VVGGIYETSVGEYSIVTLPDGTELVLNTNSLVRMNYTDQRRILLLERGEVHVKVARD-IS 178 Query: 166 RPFRVLTRQGQLTALGTEFTVR-QQDNFTQLDVQQHAV-------------EVLLASAPA 211 RP + ++ A+GTEF V D +L V + V E+LL + P+ Sbjct: 179 RPLSLFAGTQEIRAVGTEFNVEINSDQKIELVVTEGKVLVGVHQQMTKDETELLLVNLPS 238 Query: 212 QKRIVNAGESLQFSAS--EFGAVKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRN-G 267 V+ GE++ ++ E + P + SW + L F + L + + RY Sbjct: 239 STTSVSEGEAIILGSADEEVDEISPEEIAVKLSWQQGNLIFRGESLAAAVDEIGRYTTVE 298 Query: 268 VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + D + LR+SG F + D +L + + + Sbjct: 299 FVILDENLKKLRISGLFKAGDVDGLLTTLEENFNI 333 >UniRef50_Q1YUD9 Sigma factor regulatory protein, FecR/PupR family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD9_9GAMM Length = 343 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 85/354 (24%), Positives = 142/354 (40%), Gaps = 57/354 (16%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + Q + A+ W+ ++ VS Q W + D+ A++Q+E L L Sbjct: 1 MSEIYMQFSDQVNQQAAEWFTLMQSGDVSASDREALQAWLAEHSDHDKAFKQMELLWQDL 60 Query: 61 GGVPGDVASRALHDT--------RLTR----------------RHVMKGLLLLLGAGGGW 96 G V RAL + RL + + M ++ + G Sbjct: 61 GDVADTAEGRALRQSVESESIAARLQQLLMAPLINLKNIFSVPTYAMALAVVCIAVGA-- 118 Query: 97 QLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIA 156 L E + Y T G + L D S +TL +SA RTV L GE Sbjct: 119 -LMLPIAKEPVTVYYSTQHGEIKTIVLADNSEITLGAKSAIRTHISESDRTVELLNGEAF 177 Query: 157 ITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP------ 210 AKD Q+PF V + +GT+F V++ + + V + V+V +A Sbjct: 178 FDIAKDR-QKPFSVAVNDVLIEVVGTQFNVQKIRDAVNVAVLEGIVKVFEQAASQTVSLP 236 Query: 211 -----AQKRIVN----AGESL-QFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIAT 260 A +++V A ES+ S+S+ GA W L + D L +++A Sbjct: 237 DVVLTAGQKVVKSNDRAFESVTAVSSSDLGA----------WRLGRLIYRDISLADIVAD 286 Query: 261 LTRYRNG--VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWI 312 RY +G +L+ D + ++++ T + ++AQTLP+K+Q I+ I Sbjct: 287 AGRYFDGKIILQSDD-LDEVKVTMTLRTDQVGQLPEMLAQTLPLKVQVISEKLI 339 >UniRef50_B3PGL0 Probable transmembrane sensor n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PGL0_CELJU Length = 340 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 84/332 (25%), Positives = 138/332 (41%), Gaps = 46/332 (13%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAW---QQVENLRNQLGGVPGDVAS 69 +R+A+ W ++ + SP + + QW +QD ++ A+ +QV L QL + Sbjct: 18 VRAAADWCMLIHSDECSPADQVAFNQWLKQDPAHEQAYNKIRQVWGLSEQLTPTISSPWA 77 Query: 70 RALHDTRLTRR-----------------HVMKGLLLLLGAGG-GWQLWQSETGEGLRADY 111 +A + T+ V +LL+ G GW L E R Sbjct: 78 QANTSPKTTQPLPIAAKTPYWPWQSIAWAVSLASILLVTLGYLGWTL-NCVPNEYHRYST 136 Query: 112 RTAKGTVSRQQLEDGSL--LTLNTQ-SAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 A+ V L DG+ + LNTQ S A+ R +R V + A + PF Sbjct: 137 EQARSHVI---LPDGTRVEMNLNTQISYANYR---DRRHVSINGNGEAFFNVSHNTKHPF 190 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEV-----LLASAPAQKRIVNAGESLQ 223 ++ G +T GT F V + + V + +V V + P K A SL+ Sbjct: 191 KISAANGTITVTGTAFNVWKYGKDVAVTVTEGSVIVQNGKDTVHLTPGMKAEYTAKYSLK 250 Query: 224 FSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSG 282 S FG + D++ +W L D+PL + I + RY + ++ D VA LR+ G Sbjct: 251 VS---FGDL----DQALAWQSGKLILDDQPLAKAIPQIARYLDESIILTDATVANLRIGG 303 Query: 283 TFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 + +N D ++ + Q LP+ I+ R+W I Sbjct: 304 IYNTENLDDLITALPQILPLSIKK--RFWSGI 333 >UniRef50_B0T3U4 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0T3U4_CAUSK Length = 316 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 8/200 (4%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y TA G + R + DGS+ +NT SA +V R VRL GE AKDA RPF V Sbjct: 107 YGTALGEIRRLPMADGSVAAINTDSAIEVAMRQRLRAVRLDRGEAWFEVAKDA-ARPFVV 165 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 + + A+GT F+VR+++ + + V + VEV + R ++AG+ + F+ + G Sbjct: 166 ESGPVRARAVGTAFSVRRRETGSDILVTEGVVEVWVKDGKIPPRRISAGQRV-FADNTLG 224 Query: 231 AVKPLDDE-----STSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTF 284 + P + E +W + + L E A RY + + D +A R G F Sbjct: 225 ILTPPEPEVDLNRQLAWRDGQIVLDGQTLAEAAAEFNRYNKRKIEIADLRLADARFVGWF 284 Query: 285 PLKNTDAILNVIAQTLPVKI 304 + + A T ++ Sbjct: 285 RTSDPEGFAQAAAATFKGRV 304 >UniRef50_B0T4N7 Anti-FecI sigma factor, FecR n=2 Tax=Caulobacter RepID=B0T4N7_CAUSK Length = 332 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 9/209 (4%) Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y V+R L DGS +TL+ R H RT+ L G+ + DA +RPF V Sbjct: 122 YVAPPHAVARLILADGSHVTLSPGGRLTARLSRHARTLALIDGDAFFDVSHDA-RRPFTV 180 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 LT LGT F V T + + Q A+ V AP ++ GE ++ ++E G Sbjct: 181 AVSDRTLTVLGTRFNVAGGRRLT-VSLVQGALRVSQTDAP--DVLLQPGE--RYLSAERG 235 Query: 231 AVKPLDDES--TSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLK 287 D + +WT L F+D L EV L+R V+ DP +A LRLSG+ ++ Sbjct: 236 GRAEAGDVAGDAAWTSGRLVFADVGLVEVAERLSRAAGRKVILADPTLADLRLSGSVRVE 295 Query: 288 NTDAILNVIAQTLPVKIQSITRYWINISP 316 D + + LPVK + + I P Sbjct: 296 RLDDVRAALEVALPVKTHTTPDGSLVIIP 324 >UniRef50_C7JHQ5 Two component sensor histidine kinase FecR/PupR n=8 Tax=Acetobacter pasteurianus RepID=C7JHQ5_ACEP3 Length = 325 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/329 (22%), Positives = 135/329 (41%), Gaps = 30/329 (9%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 D ++A A W +L+ E +++W + + AWQQV + + + P + Sbjct: 2 DESQKAEAEAIDWSLLLNEEPDDQALRHEFEKWLSEKPAHAIAWQQVTAISDIIRSAPPN 61 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLR------------------ 108 + R ++ LL+ L + W+ G G+ Sbjct: 62 RQVAPVRPVAFQSR--IQALLVFLQ-----KRWRLLFGSGVAATALCAALLLIIPDLITR 114 Query: 109 --ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 AD GT L DGS + L +SA ++ A +R + L GE A T R Sbjct: 115 FLADQYAPAGTTRTLHLADGSDVVLAPRSAISIQISAQERHIDLIQGE-AFFTVHHENSR 173 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA 226 PF V + + +GT F ++ + T + V+ V + ++ R ++ GE + S Sbjct: 174 PFIVQAGKVRAQDIGTAFDIQIAHHETTVRVRDGVVHIAASTPRIYARDLHGGEWARVSD 233 Query: 227 SEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFP 285 ++ G + +W + +L + +G++I L + ++ A+ G R++G + Sbjct: 234 TDIGDGTLPPETVGAWKEGVLIARNDKVGDMITALRPWSGKRIVVMKQALLGKRVTGVYD 293 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINI 314 L+N DA L +I L KI +T W N+ Sbjct: 294 LRNPDAALRLIVSPLGGKIIHVTP-WANL 321 >UniRef50_Q213I4 Putative FecR n=2 Tax=Rhodopseudomonas palustris RepID=Q213I4_RHOPB Length = 327 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 14/207 (6%) Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 L ADYRTAKG + Q+ L LNTQ++ +R Q T+ L GE+ + + Sbjct: 121 LSADYRTAKGEQRKVQVTPEVSLELNTQTSIALRSQQGQPTIELISGEVLVNALRPT-SG 179 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA 226 P VL GQ+ A +F D + V+V + Q + G+ L +++ Sbjct: 180 PLVVLAAGGQIGASEAQFNAHCFDAAVSVTCLNGTVDVQHS---GQSVRIGKGQQLSYTS 236 Query: 227 SEFGAVKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRL----- 280 + G +D + T+W +L F D+PL V+ + RYR G + + G L Sbjct: 237 AGVGPSMNVDPAQVTAWQSGLLIFRDRPLAAVVEEVNRYRPGKI----VIVGAELRWRAV 292 Query: 281 SGTFPLKNTDAILNVIAQTLPVKIQSI 307 +G F + D+ + + Q + S+ Sbjct: 293 NGDFEINKLDSFVTQVEQLFGARATSL 319 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P23485 Protein fecR n=30 Tax=Enterobacteriaceae RepID=F... 409 e-113 UniRef50_A6T3T9 Fe2+-dicitrate sensor, membrane component n=1 Ta... 324 3e-87 UniRef50_Q4KED4 Sigma factor regulatory protein FecR n=2 Tax=Pse... 319 7e-86 UniRef50_Q7N8I4 Similarities with probable transmembrane sensor ... 319 1e-85 UniRef50_C3K1F9 Putative iron transport-related protein n=1 Tax=... 315 2e-84 UniRef50_A6T180 Fe2+-dicitrate sensor, membrane component n=3 Ta... 311 2e-83 UniRef50_Q82VT5 Putative transmembrane sensor n=1 Tax=Nitrosomon... 310 3e-83 UniRef50_Q1GXU4 Putative FecR n=1 Tax=Methylobacillus flagellatu... 310 5e-83 UniRef50_C6XE50 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 309 6e-83 UniRef50_B3PJT3 Transmembrane sensor n=1 Tax=Cellvibrio japonicu... 308 1e-82 UniRef50_A6SVZ8 Fe2+-dicitrate sensor, membrane component n=1 Ta... 304 3e-81 UniRef50_A6V0K5 Probable transmembrane sensor n=6 Tax=Pseudomona... 303 5e-81 UniRef50_A6T3T5 Fe2+-dicitrate sensor, membrane component n=2 Ta... 302 8e-81 UniRef50_B0KIL8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas... 302 8e-81 UniRef50_A6SXC7 Fe2+-dicitrate sensor, membrane component n=1 Ta... 299 7e-80 UniRef50_A6T0J4 Fe2+-dicitrate sensor, membrane component n=1 Ta... 298 2e-79 UniRef50_A9C159 Anti-FecI sigma factor, FecR n=2 Tax=cellular or... 297 3e-79 UniRef50_B8ECR9 Anti-FecI sigma factor, FecR n=3 Tax=Shewanella ... 296 6e-79 UniRef50_B4X4W9 Sigma factor regulatory protein, FecR/PupR famil... 295 2e-78 UniRef50_A6SX53 Fe2+-dicitrate sensor, membrane component n=1 Ta... 294 3e-78 UniRef50_B0KG70 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonad... 294 3e-78 UniRef50_C6XBX8 Anti-FecI sigma factor, FecR n=2 Tax=Betaproteob... 293 7e-78 UniRef50_C3K7W7 Putative iron uptake regulator protein n=2 Tax=P... 293 7e-78 UniRef50_B0KJM3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 292 9e-78 UniRef50_Q82SB2 Putative transmembrane sensor n=1 Tax=Nitrosomon... 292 1e-77 UniRef50_B4WXE6 Sigma factor regulatory protein, FecR/PupR famil... 292 2e-77 UniRef50_B7VAW3 Probable transmembrane sensor n=7 Tax=Pseudomona... 291 2e-77 UniRef50_A9C156 Anti-FecI sigma factor, FecR n=3 Tax=Comamonadac... 291 2e-77 UniRef50_A9BW97 Anti-FecI sigma factor, FecR n=1 Tax=Delftia aci... 290 4e-77 UniRef50_B0KMC8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas... 290 6e-77 UniRef50_C6XBX0 Anti-FecI sigma factor, FecR n=4 Tax=Proteobacte... 289 9e-77 UniRef50_C6DJA8 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacter... 289 1e-76 UniRef50_D0S2I9 Transmembrane sensor n=1 Tax=Acinetobacter calco... 289 1e-76 UniRef50_A6SXA7 Fe2+-dicitrate sensor, membrane component n=1 Ta... 286 8e-76 UniRef50_B0KPG4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 286 8e-76 UniRef50_B3PJT6 Transmembrane sensor n=1 Tax=Cellvibrio japonicu... 285 1e-75 UniRef50_C1DJ04 Anti-sigma factor, FecR family n=1 Tax=Azotobact... 285 1e-75 UniRef50_Q02NL2 Possible Fe2+-dicitrate sensor n=1 Tax=Pseudomon... 285 2e-75 UniRef50_C6CDZ5 Anti-FecI sigma factor, FecR n=5 Tax=Enterobacte... 283 6e-75 UniRef50_Q4ZTA2 FecR protein n=11 Tax=Pseudomonas RepID=Q4ZTA2_P... 282 2e-74 UniRef50_B0KIR0 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 282 2e-74 UniRef50_Q39ES0 Putative FecR n=1 Tax=Burkholderia sp. 383 RepID... 281 2e-74 UniRef50_Q88IB4 Transmembrane sensor, putative n=3 Tax=Pseudomon... 280 4e-74 UniRef50_D0J628 Putative FecR n=1 Tax=Comamonas testosteroni CNB... 280 4e-74 UniRef50_UPI00016AFA6E putative FecR protein n=1 Tax=Burkholderi... 279 7e-74 UniRef50_A6SZL9 Fe2+-dicitrate sensor, membrane component n=1 Ta... 279 8e-74 UniRef50_C1DFE7 Anti-sigma factor, FecR family n=2 Tax=Pseudomon... 278 1e-73 UniRef50_A5VYE0 Anti-FecI sigma factor, FecR n=4 Tax=Pseudomonas... 278 2e-73 UniRef50_B0KNB6 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 277 3e-73 UniRef50_A6T3S7 Fe2+-dicitrate sensor, membrane component n=4 Ta... 277 5e-73 UniRef50_A9BWH6 Anti-FecI sigma factor, FecR n=2 Tax=cellular or... 276 6e-73 UniRef50_A9BW91 Anti-FecI sigma factor, FecR n=1 Tax=Delftia aci... 275 1e-72 UniRef50_A1BCE6 Putative FecR n=2 Tax=Proteobacteria RepID=A1BCE... 275 2e-72 UniRef50_A4VS46 Probable transmembrane sensor n=1 Tax=Pseudomona... 273 4e-72 UniRef50_Q1LER3 Putative FecR n=1 Tax=Cupriavidus metallidurans ... 273 5e-72 UniRef50_C9NLK7 Transmembrane sensor n=1 Tax=Vibrio coralliilyti... 271 2e-71 UniRef50_Q88Q30 Transmembrane sensor, putative n=1 Tax=Pseudomon... 271 2e-71 UniRef50_A1K836 Putative transmembrane sensor n=1 Tax=Azoarcus s... 271 3e-71 UniRef50_A9BUB2 Anti-FecI sigma factor, FecR n=5 Tax=Proteobacte... 270 3e-71 UniRef50_Q887T2 Regulatory protein, putative n=4 Tax=Pseudomonas... 270 4e-71 UniRef50_B7X231 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas t... 269 8e-71 UniRef50_A6VD04 Probable transmembrane sensor n=6 Tax=Pseudomona... 269 8e-71 UniRef50_Q4ZM65 FecR protein n=23 Tax=Pseudomonas RepID=Q4ZM65_P... 268 2e-70 UniRef50_Q48ML1 Sigma factor regulatory protein, FecR/PupR famil... 267 5e-70 UniRef50_A6SZM2 Fe2+-dicitrate sensor, membrane component n=1 Ta... 266 7e-70 UniRef50_Q4KKG0 Sigma factor regulatory protein, FecR/PupR famil... 264 2e-69 UniRef50_B7WXN1 Anti-FecI sigma factor, FecR n=2 Tax=Comamonas t... 264 3e-69 UniRef50_A6W3B6 Sigma factor regulatory protein, FecR/PupR famil... 264 3e-69 UniRef50_A6W1Y1 Anti-FecI sigma factor, FecR n=1 Tax=Marinomonas... 263 6e-69 UniRef50_A9IDD5 Transmembrane sensor n=1 Tax=Bordetella petrii D... 261 2e-68 UniRef50_Q82TB4 Putative transmembrane sensor n=1 Tax=Nitrosomon... 261 3e-68 UniRef50_A3NJI2 Sigma factor regulatory protein, FecR/PupR famil... 260 4e-68 UniRef50_B8L6A8 Sigma factor regulatory protein, FecR/PupR famil... 257 6e-67 UniRef50_Q4KDP8 Sigma factor regulatory protein PupR n=2 Tax=Pse... 257 6e-67 UniRef50_Q82WU9 Putative transcriptional regulator, putative n=1... 256 6e-67 UniRef50_B9JNI9 FecR iron sensor protein n=1 Tax=Agrobacterium r... 256 7e-67 UniRef50_A9VXG0 FecR protein n=6 Tax=Methylobacterium RepID=A9VX... 255 1e-66 UniRef50_Q1IGG4 Putative FecR-like transmembrane sensor n=2 Tax=... 255 2e-66 UniRef50_A6X2N0 Anti-FecI sigma factor, FecR n=1 Tax=Ochrobactru... 253 4e-66 UniRef50_Q2RUF5 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC... 253 4e-66 UniRef50_B7X445 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas t... 252 1e-65 UniRef50_C6DBT1 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacter... 252 1e-65 UniRef50_Q0AEB9 Putative FecR n=2 Tax=Nitrosomonas RepID=Q0AEB9_... 251 2e-65 UniRef50_Q4K9E6 Sigma factor regulatory protein, FecR/PupR famil... 251 2e-65 UniRef50_Q2KXL7 Regulator of iron dicitrate transport (Fragment)... 251 3e-65 UniRef50_Q6FBE6 Membrane bound regulator in multi-component regu... 250 4e-65 UniRef50_C6XBM0 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 250 7e-65 UniRef50_C6D936 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacter... 249 1e-64 UniRef50_C1DGX1 Anti-sigma factor, FecR-like protein n=1 Tax=Azo... 249 1e-64 UniRef50_B0KLJ0 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonad... 248 3e-64 UniRef50_Q15XC6 Putative FecR n=1 Tax=Pseudoalteromonas atlantic... 247 3e-64 UniRef50_Q4KBG4 Sigma factor regulatory protein, FecR/PupR famil... 247 4e-64 UniRef50_Q88PI4 Transmembrane sensor, putative n=6 Tax=Pseudomon... 246 9e-64 UniRef50_D0KIJ1 Anti-FecI sigma factor, FecR n=1 Tax=Pectobacter... 246 9e-64 UniRef50_Q3SUQ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb... 245 1e-63 UniRef50_C1DGE4 Anti-sigma factor protein, FecR family n=1 Tax=A... 244 3e-63 UniRef50_Q3SN47 FecR protein n=2 Tax=Nitrobacter RepID=Q3SN47_NITWN 244 4e-63 UniRef50_Q82W78 Putative transmembrane sensor n=1 Tax=Nitrosomon... 243 5e-63 UniRef50_B7X004 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas t... 243 5e-63 UniRef50_Q48JU1 FecR protein superfamily n=19 Tax=Pseudomonas Re... 243 7e-63 UniRef50_Q4KE62 Sigma factor regulatory protein, FecR/PupR famil... 243 8e-63 UniRef50_Q82WX3 Putative transmembrane sensor n=1 Tax=Nitrosomon... 242 1e-62 UniRef50_A3WYF9 Putative FecR n=1 Tax=Nitrobacter sp. Nb-311A Re... 242 1e-62 UniRef50_B0KIR3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 241 3e-62 UniRef50_Q3SR62 FecR protein n=3 Tax=Bradyrhizobiaceae RepID=Q3S... 241 3e-62 UniRef50_A7IJ25 Anti-FecI sigma factor, FecR n=3 Tax=Alphaproteo... 240 5e-62 UniRef50_Q4KAZ6 Sigma factor regulatory protein, putative n=1 Ta... 240 6e-62 UniRef50_C1DIF1 Anti-sigma factor protein, FecR family n=1 Tax=A... 239 8e-62 UniRef50_Q82VI9 Putative transmembrane sensor n=1 Tax=Nitrosomon... 239 8e-62 UniRef50_Q15VP5 Putative FecR n=1 Tax=Pseudoalteromonas atlantic... 239 8e-62 UniRef50_C6X948 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 238 1e-61 UniRef50_A6SZL6 Fe2+-dicitrate sensor, membrane component n=1 Ta... 238 1e-61 UniRef50_Q3SSZ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb... 238 2e-61 UniRef50_A1BAQ4 Putative FecR n=1 Tax=Paracoccus denitrificans P... 238 2e-61 UniRef50_B3PGL0 Probable transmembrane sensor n=1 Tax=Cellvibrio... 237 4e-61 UniRef50_B6IXY0 Sigma factor regulatory protein, FecR n=1 Tax=Rh... 237 4e-61 UniRef50_B7VA52 Probable transmembrane sensor n=5 Tax=Pseudomona... 236 1e-60 UniRef50_B0KIQ3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 235 1e-60 UniRef50_UPI0001AF4CF8 FecR protein superfamily protein n=1 Tax=... 235 2e-60 UniRef50_C5BRF0 Transmembrane sensor n=1 Tax=Teredinibacter turn... 235 2e-60 UniRef50_Q1YUD9 Sigma factor regulatory protein, FecR/PupR famil... 235 2e-60 UniRef50_C6X944 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 235 2e-60 UniRef50_Q21KS4 FecR protein n=1 Tax=Saccharophagus degradans 2-... 235 2e-60 UniRef50_B7UW19 Probable transmembrane sensor n=6 Tax=Pseudomona... 234 3e-60 UniRef50_B6YYD9 FecR protein n=1 Tax=Pseudovibrio sp. JE062 RepI... 233 9e-60 UniRef50_B9K518 Two component sensor kinase n=1 Tax=Agrobacteriu... 232 1e-59 UniRef50_Q92NX5 Putative iron transport regulator transmembrane ... 232 1e-59 UniRef50_A4Y0Z0 Putative FecR n=1 Tax=Pseudomonas mendocina ymp ... 231 2e-59 UniRef50_A9CLD9 Transmembrane sensor n=1 Tax=Agrobacterium tumef... 231 3e-59 UniRef50_Q82WV2 Possible transmembrane sensor n=1 Tax=Nitrosomon... 230 4e-59 UniRef50_A5VYP7 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas... 230 5e-59 UniRef50_Q2KUB5 Heme uptake transmembrane sensor n=2 Tax=Bordete... 230 5e-59 UniRef50_Q7WEI1 Heme uptake transmembrane sensor n=2 Tax=Bordete... 230 6e-59 UniRef50_Q3SUW8 FecR protein n=3 Tax=Rhizobiales RepID=Q3SUW8_NITWN 229 9e-59 UniRef50_C7JHQ2 Two component sensor histidine kinase FecR/PupR ... 229 1e-58 UniRef50_B7S234 Sigma factor regulatory protein, FecR/PupR famil... 229 1e-58 UniRef50_D2LKP6 Anti-FecI sigma factor, FecR n=2 Tax=Rhodomicrob... 228 2e-58 UniRef50_Q7M8T7 PUTATIVE TRANSMEMBRANE SENSOR n=1 Tax=Wolinella ... 228 2e-58 UniRef50_B0KMC5 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 227 4e-58 UniRef50_C6DD79 Anti-FecI sigma factor, FecR n=5 Tax=Pectobacter... 226 6e-58 UniRef50_Q3SQY3 Probable FecR, iron siderophore sensor protein n... 226 6e-58 UniRef50_B8KN81 CytoChrome c oxidase Cbb3-type, subunit I n=1 Ta... 225 1e-57 UniRef50_Q7W4H6 Putative inner membrane sensor for iron transpor... 225 2e-57 UniRef50_C1DGN9 PupR/FecR-like anti-sigma factor protein n=1 Tax... 225 2e-57 UniRef50_Q1LPC1 Putative FecR n=1 Tax=Cupriavidus metallidurans ... 225 2e-57 UniRef50_C4SII2 Fe2+-dicitrate sensor, membrane component n=2 Ta... 224 3e-57 UniRef50_B7V267 Probable transmembrane sensor n=7 Tax=Pseudomona... 224 4e-57 UniRef50_C6XPM9 Anti-FecI sigma factor, FecR n=1 Tax=Hirschia ba... 223 4e-57 UniRef50_Q3SNK9 FecR protein n=2 Tax=Nitrobacter RepID=Q3SNK9_NITWN 223 5e-57 UniRef50_Q4KBX2 Sigma factor regulatory protein, FecR/PupR famil... 223 6e-57 UniRef50_C6XBX5 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 223 7e-57 UniRef50_A9CFJ7 Two component sensor kinase n=1 Tax=Agrobacteriu... 223 7e-57 UniRef50_Q2RRS2 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC... 221 2e-56 UniRef50_B1ZHY6 Anti-FecI sigma factor, FecR n=2 Tax=Methylobact... 221 2e-56 UniRef50_D0Y1A0 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 220 6e-56 UniRef50_Q4KI13 Sigma factor regulatory protein, FecR/PupR famil... 220 7e-56 UniRef50_B0KMD4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 219 8e-56 UniRef50_B4RFZ1 Transcriptional regulator n=2 Tax=Phenylobacteri... 219 1e-55 UniRef50_B2Q6M2 Putative uncharacterized protein n=2 Tax=Provide... 218 3e-55 UniRef50_C5SQ91 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 217 3e-55 UniRef50_B0SXJ1 Anti-FecI sigma factor, FecR n=2 Tax=Caulobacter... 217 4e-55 UniRef50_Q2L2C5 Transmembrane sensor protein n=1 Tax=Bordetella ... 216 1e-54 UniRef50_B3PLQ9 Sigma factor regulatory protein, FecR/PupR famil... 216 1e-54 UniRef50_C1DDL2 Anti-sigma factor, FecR family n=1 Tax=Azotobact... 216 1e-54 UniRef50_Q217A2 Putative FecR n=1 Tax=Rhodopseudomonas palustris... 215 2e-54 UniRef50_B4WC07 Sigma factor regulatory protein, FecR/PupR famil... 215 2e-54 UniRef50_B2HV65 Fe2+-dicitrate sensor, membrane component n=5 Ta... 215 2e-54 UniRef50_B0T8M8 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 215 2e-54 UniRef50_B4SJG6 Anti-FecI sigma factor, FecR n=2 Tax=Stenotropho... 215 3e-54 UniRef50_A9CF44 Two component sensor kinase n=1 Tax=Agrobacteriu... 214 3e-54 UniRef50_C6X7E8 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 214 4e-54 UniRef50_Q2RW10 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC... 214 4e-54 UniRef50_Q3HKE5 FecR protein n=3 Tax=Rhodobacter sphaeroides Rep... 214 4e-54 UniRef50_Q0C5P1 Sigma factor regulatory protein, FecR/PupR famil... 213 9e-54 UniRef50_D0XU60 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 212 1e-53 UniRef50_B4W7I5 Sigma factor regulatory protein, FecR/PupR famil... 212 1e-53 UniRef50_Q2KZD9 Putative transmembrane sensor protein (Fragment)... 212 1e-53 UniRef50_Q07HV9 Putative FecR n=2 Tax=Rhodopseudomonas palustris... 212 1e-53 UniRef50_A4C3P5 Putative regulatory protein n=1 Tax=Pseudoaltero... 211 2e-53 UniRef50_B4WBG4 Sigma factor regulatory protein, FecR/PupR famil... 211 2e-53 UniRef50_D1B2C8 FecR protein n=1 Tax=Sulfurospirillum deleyianum... 210 6e-53 UniRef50_B4RTZ4 Putative regulatory protein n=2 Tax=Alteromonas ... 209 9e-53 UniRef50_Q13G72 Putative FecR n=1 Tax=Burkholderia xenovorans LB... 209 9e-53 UniRef50_B0SYA7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 209 9e-53 UniRef50_Q6FD18 Putative transmembrane sensor n=1 Tax=Acinetobac... 209 1e-52 UniRef50_D1NXK1 Sigma factor regulatory protein, FecR/PupR famil... 209 1e-52 UniRef50_A5V4S3 Anti-FecI sigma factor, FecR n=1 Tax=Sphingomona... 209 1e-52 UniRef50_B7VA09 Probable transmembrane sensor n=6 Tax=Pseudomona... 209 1e-52 UniRef50_UPI00016A4649 FecR family protein n=2 Tax=Burkholderia ... 209 1e-52 UniRef50_B6QYF1 FecR protein, putative n=1 Tax=Pseudovibrio sp. ... 209 1e-52 UniRef50_Q1I5S1 Putative FecR-like transmembrane sensor n=1 Tax=... 208 2e-52 UniRef50_A6T0L2 Fe2+-dicitrate sensor, membrane component n=1 Ta... 208 3e-52 UniRef50_B1J3A1 Anti-FecI sigma factor, FecR n=6 Tax=Pseudomonas... 208 3e-52 UniRef50_Q1YSL3 Putative regulatory protein n=1 Tax=gamma proteo... 207 4e-52 UniRef50_A4ABA5 Fe2+-dicitrate sensor, membrane component n=1 Ta... 207 5e-52 UniRef50_C7JHQ5 Two component sensor histidine kinase FecR/PupR ... 206 6e-52 UniRef50_B4S0Z9 Putative regulatory protein n=2 Tax=Alteromonas ... 206 6e-52 UniRef50_Q4KE34 Sigma factor regulatory protein, FecR/PupR famil... 206 7e-52 UniRef50_B1J6G1 Anti-FecI sigma factor, FecR n=2 Tax=Gammaproteo... 206 7e-52 UniRef50_Q4K5N6 Sigma factor regulatory protein, FecR/PupR famil... 206 7e-52 UniRef50_A5V578 Anti-FecI sigma factor, FecR n=1 Tax=Sphingomona... 206 9e-52 UniRef50_B8H3N4 FecR family protein n=3 Tax=Caulobacter RepID=B8... 206 9e-52 UniRef50_B8L287 Anti-FecI sigma factor, FecR n=1 Tax=Stenotropho... 206 1e-51 UniRef50_C5SN43 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 206 1e-51 UniRef50_B0SVT6 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 205 2e-51 UniRef50_B6X9X8 Putative uncharacterized protein n=2 Tax=Provide... 204 3e-51 UniRef50_Q7VZ09 Putative signal transduction protein n=2 Tax=Bor... 204 3e-51 UniRef50_A8ICQ2 Putative iron siderophore sensor protein n=1 Tax... 204 3e-51 UniRef50_Q1N723 Regulatory protein PupR, putative n=1 Tax=Sphing... 204 4e-51 UniRef50_Q88P46 Transmembrane sensor, putative n=12 Tax=Pseudomo... 203 5e-51 UniRef50_C7JBI1 Two component sensor histidine kinase FecR/PupR ... 203 5e-51 UniRef50_Q82VA6 Putative transmembrane sensor n=1 Tax=Nitrosomon... 203 5e-51 UniRef50_Q47F02 FecR protein n=1 Tax=Dechloromonas aromatica RCB... 203 6e-51 UniRef50_Q4KD29 Sigma factor regulatory protein, FecR/PupR famil... 203 7e-51 UniRef50_Q5R0S8 Iron-dicitrate sensor, membrane component n=1 Ta... 203 8e-51 UniRef50_B4SLV2 Anti-FecI sigma factor, FecR n=3 Tax=Stenotropho... 202 1e-50 UniRef50_B1KES8 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonad... 202 1e-50 UniRef50_Q3SU82 FecR protein n=5 Tax=Rhizobiales RepID=Q3SU82_NITWN 202 1e-50 UniRef50_B0T5T9 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 202 2e-50 UniRef50_B6ITM8 Sigma factor regulatory protein, FecR n=1 Tax=Rh... 202 2e-50 UniRef50_B8H128 FecR family protein n=3 Tax=Caulobacter RepID=B8... 201 2e-50 UniRef50_Q6NA51 Probable FecR, iron siderophore sensor protein n... 201 2e-50 UniRef50_B1KDJ5 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonad... 201 3e-50 UniRef50_B1ZTJ9 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus te... 201 3e-50 UniRef50_Q213I4 Putative FecR n=2 Tax=Rhodopseudomonas palustris... 201 3e-50 UniRef50_B3QG97 Anti-FecI sigma factor, FecR n=5 Tax=Bradyrhizob... 200 5e-50 UniRef50_A3UKH4 Transcriptional regulator, putative n=1 Tax=Ocea... 200 5e-50 UniRef50_Q8PKI1 Two-component system sensor protein n=1 Tax=Xant... 199 8e-50 UniRef50_B1ZXK1 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus te... 199 8e-50 UniRef50_B4WD83 Sigma factor regulatory protein, FecR/PupR famil... 199 9e-50 UniRef50_Q4KAM0 Sigma factor regulatory protein, FecR/PupR famil... 199 1e-49 UniRef50_A8EWQ5 Sigma factor regulatory protein, FecR/PupR famil... 199 1e-49 UniRef50_C5SKV9 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 198 2e-49 UniRef50_C5SQB3 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 198 2e-49 UniRef50_Q14F31 FecR (Fragment) n=6 Tax=Enterobacteriaceae RepID... 198 2e-49 UniRef50_D0XTD7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 198 3e-49 UniRef50_Q47X54 Putative regulatory protein n=1 Tax=Colwellia ps... 198 3e-49 UniRef50_B0U8Q5 Anti-FecI sigma factor, FecR n=1 Tax=Methylobact... 198 3e-49 UniRef50_D0XPS8 Anti-FecI sigma factor, FecR n=1 Tax=Brevundimon... 197 4e-49 UniRef50_A6T0M6 Fe2+-dicitrate sensor, membrane component n=1 Ta... 197 4e-49 UniRef50_Q79AD3 HasS protein n=1 Tax=Serratia marcescens RepID=Q... 197 6e-49 UniRef50_A6SZB6 Fe2+-dicitrate sensor, membrane component n=1 Ta... 196 6e-49 UniRef50_B4SP26 Anti-FecI sigma factor, FecR n=3 Tax=Stenotropho... 196 7e-49 UniRef50_Q1H1L7 Putative FecR n=1 Tax=Methylobacillus flagellatu... 196 8e-49 UniRef50_A8EUR0 Sigma factor regulatory protein, FecR/PupR famil... 196 8e-49 UniRef50_Q1NEQ4 Two-component system sensor protein n=1 Tax=Sphi... 196 1e-48 UniRef50_B4EXQ7 FecR-like transcriptional regulator n=4 Tax=Prot... 196 1e-48 UniRef50_Q15XS4 Putative FecR n=1 Tax=Pseudoalteromonas atlantic... 196 1e-48 UniRef50_A9C118 Anti-FecI sigma factor, FecR n=1 Tax=Delftia aci... 194 3e-48 UniRef50_D0J1W8 Putative FecR n=1 Tax=Comamonas testosteroni CNB... 194 3e-48 Sequences not found previously or not previously below threshold: >UniRef50_P23485 Protein fecR n=30 Tax=Enterobacteriaceae RepID=FECR_ECOLI Length = 317 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL Sbjct: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR Sbjct: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL Sbjct: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST Sbjct: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL Sbjct: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 Query: 301 PVKIQSITRYWINISPL 317 PVKIQSITRYWINISPL Sbjct: 301 PVKIQSITRYWINISPL 317 >UniRef50_A6T3T9 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T3T9_JANMA Length = 340 Score = 324 bits (830), Expect = 3e-87, Method: Composition-based stats. Identities = 125/314 (39%), Positives = 176/314 (56%), Gaps = 8/314 (2%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 R R A+ W A L + S + A ++W D +++ AWQ+ + + + G VP V Sbjct: 23 RAIAREAAQWLASLYDGQ-SEEDIAACKRWRAADPEHERAWQRAQRINQKFGIVPKAVGL 81 Query: 70 RAL-HDTRLTRRHVMKGLLLLL-GAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 AL R+ RR +K LL+L+ A G+ ++ + ADYRTAKG QL DG+ Sbjct: 82 PALGRKVRVDRRRAIKTLLVLMMAAPVGYVSYRYAPWVAMTADYRTAKGEHREIQLADGT 141 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQGQLTALGTEF 184 + L T ++ D+ FD QR +RL GEI + T D+ RPF V T G + ALGT F Sbjct: 142 RVHLGTATSIDIEFDGAQRLLRLHAGEIEVRTGSDSGHPAYRPFIVKTTHGYIRALGTRF 201 Query: 185 TVRQQDNFT--QLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 VR+ + T ++ V +HAVE+ +A + ++NAG+ +F+ S F V+ LD W Sbjct: 202 VVRRDEGATTTRVSVLEHAVEIRPQAASGKLIVLNAGQQTRFNESGFEQVEALDPHVADW 261 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 T +L S L E A L RYR G+LRCDPAVAGLR++G F L NTD ILN + TLPV Sbjct: 262 TSGVLFASRMRLDEFAAELNRYRPGLLRCDPAVAGLRITGAFQLDNTDNILNALPDTLPV 321 Query: 303 KIQSITRYWINISP 316 ++ TRYW+ I P Sbjct: 322 EVLFRTRYWVTIVP 335 >UniRef50_Q4KED4 Sigma factor regulatory protein FecR n=2 Tax=Pseudomonas RepID=Q4KED4_PSEF5 Length = 323 Score = 319 bits (819), Expect = 7e-86, Method: Composition-based stats. Identities = 125/307 (40%), Positives = 194/307 (63%), Gaps = 2/307 (0%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 RQA+ A+ WYA L S Q++A W++W D ++ AW++++ L Q+ +PG +A Sbjct: 12 ERQAISGAARWYAQLRSGSASEQEQAAWREWLAADPLHRQAWERMQQLGEQMSALPGGLA 71 Query: 69 SRALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 L +RR +M+ L++L AG GW W+S++ + L ADYRT G + +L DG+ Sbjct: 72 GSTLRGAGRSRRELMRNLVVLASAGSLGWLGWRSDSAQQLLADYRTQIGERRQVRLADGT 131 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 L LNT ++ +V+FD+ QR V+L +GE+ ++TA D LQRPFRV TR ++ ALGT F +R Sbjct: 132 SLLLNTNTSINVQFDSQQRKVQLLWGEMLVSTAADPLQRPFRVFTRDAEVLALGTRFVLR 191 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 + Q+ V +HAV+V L + A +R V AG+ L FSA F A++P D +W + + Sbjct: 192 SDEREEQVAVLEHAVQVSLGAGLAPRR-VEAGQQLAFSAGGFAALRPNDAAVGAWRQGSI 250 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 D+PLGE++A L+RYR GV++CDP +AGL++SG FP+ +TD L + ++I+ Sbjct: 251 IAIDRPLGELLADLSRYRRGVVQCDPQIAGLKISGAFPIDDTDRALAALESGFSLQIKRY 310 Query: 308 TRYWINI 314 TRYW+ + Sbjct: 311 TRYWVRV 317 >UniRef50_Q7N8I4 Similarities with probable transmembrane sensor n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N8I4_PHOLL Length = 337 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 113/311 (36%), Positives = 171/311 (54%), Gaps = 7/311 (2%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 + L A+ W +L S W Q ++ AW+ + L +L +P +AS Sbjct: 26 EKILAEAAEWLTILHDSHASEADRNACAAWCAQSPEHAQAWEHAQCLLARLHHLPPHIAS 85 Query: 70 RALH-DTRLTRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 L+ L+RR ++ L+LL+ AG W+S+ + L DY T G + L D Sbjct: 86 PLLNNKQPLSRREAIRKLTLMLLIPAGASSLFWRSDQFQLLTGDYHTQTGQIQHWSLPDN 145 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEF 184 S LTLNTQS+ DV +D QR + L GEI I T KD RPF+V T+QG + ALGT+F Sbjct: 146 SQLTLNTQSSTDVHYDDTQRLISLKLGEIYIETHKDNRHPARPFKVQTKQGVIVALGTKF 205 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 +VRQQ + Q+++ + AV + + I++AGE+ F+ S SW + Sbjct: 206 SVRQQASHAQVEIVEGAVRITPDN--GLPHILHAGEATHFTQFTVAPQHTRSITSLSWLQ 263 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 ++ + PL V+ L RYR+G++RCD AVA LR+SG FPL++TD L+++ QT P+ I Sbjct: 264 GMMVADNLPLATVVTELNRYRSGIIRCDDAVAHLRVSGAFPLRDTDLALHMLLQTYPLSI 323 Query: 305 QSITRYWINIS 315 + +TRYWI ++ Sbjct: 324 RRLTRYWITLT 334 >UniRef50_C3K1F9 Putative iron transport-related protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K1F9_PSEFS Length = 314 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 125/314 (39%), Positives = 174/314 (55%), Gaps = 2/314 (0%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + R+ +A+ WY + + + WQQW D +Q AW Q+E L+ LG +P Sbjct: 1 MAAPDRKTFEAAASWYVQFQSQTPTAAERHAWQQWLNGDPSHQAAWNQMEQLQRSLGALP 60 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 D RAL T RR V+K +L+L G G GW + Q + ADYRT+ G R +L Sbjct: 61 QDFTRRAL-STSQQRRQVLKWMLVLGGTGYLGWNVQQHTPLGNVWADYRTSVGERRRVEL 119 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DG+ + LNT++A DV FD QR +RL GE+ I T K Q PF V TRQG++ ALGT Sbjct: 120 ADGTRIDLNTRTAIDVVFDGRQRLIRLREGEVLIHTGKRGGQTPFYVETRQGRIQALGTT 179 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F VRQ + T++ V + V V P+ R+++AGES F G +W Sbjct: 180 FNVRQLPDSTRVGVLEDRVSVAPGDQPSHARLLSAGESADFDRQHVGVNHAYRSSQAAWV 239 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L + LGEVI L RYR GVL+CD A A LR+SGTF L +TDA+L + TLP++ Sbjct: 240 DGQLIVLNARLGEVIEDLARYRPGVLQCDLASARLRVSGTFRLDSTDAVLANLQATLPIQ 299 Query: 304 IQSITRYWINISPL 317 ++ TRYW+++ + Sbjct: 300 VKYFTRYWVSVKRI 313 >UniRef50_A6T180 Fe2+-dicitrate sensor, membrane component n=3 Tax=Betaproteobacteria RepID=A6T180_JANMA Length = 341 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 107/321 (33%), Positives = 178/321 (55%), Gaps = 13/321 (4%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 ++ + A+ W L + V+ +WQ+W + D+ AWQ++E +L + +A Sbjct: 22 PQEVRKRAAEWLVELQADTVTDDTRKQWQRWRDAHPDHLRAWQKIEAFGEKLQTLSSPLA 81 Query: 69 SRALH-DTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 AL RR +K L ++L AGG W + + AD RT G + L DG Sbjct: 82 HAALTTPGSAGRRQAIKTLAIMLFAGGTTWLVEEQLPWRQWSADRRTGVGERATITLADG 141 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ------RPFRVLTRQGQLTAL 180 +LL LN +++ D+ + QR VRL G+I ITTA D Q RPF V TRQG + AL Sbjct: 142 TLLELNAETSVDIHYSDTQRIVRLLSGDIMITTAHDPRQASGGKARPFLVETRQGSIRAL 201 Query: 181 GTEFTVRQQ----DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 GT+F+V+Q+ +++ V + AVE+ + + RI+ AG+ F+A F A++ +D Sbjct: 202 GTQFSVQQRNEQRGGASKVSVFEGAVEIRP-NLKGEARILQAGQQTSFTADGFSAIEAVD 260 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + T+W + ++ D PL + + L YR G + CD +A L ++GT+PLK+TD +L+++ Sbjct: 261 EAVTAWRQGMIVAQDLPLRDFLKELGNYRPGHIDCDDKIAQLPVTGTYPLKDTDKVLDML 320 Query: 297 AQTLPVKIQSITRYWINISPL 317 TLP++++ +TRYW+ + + Sbjct: 321 QTTLPLQVRFVTRYWVTLHAV 341 >UniRef50_Q82VT5 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82VT5_NITEU Length = 347 Score = 310 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 108/322 (33%), Positives = 167/322 (51%), Gaps = 8/322 (2%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 P +Q A+ W +L + A+WQQW + D++ AWQ +E Q+ Sbjct: 21 TPEGPPLPKQVTLQAAKWLVMLQAPNTTQATRAKWQQWRDVHPDHERAWQHIEASATQMR 80 Query: 62 GVPGDVASRAL----HDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKG 116 + +A L + R RR +K L ++ G W L + AD+RTA Sbjct: 81 AMHSPLAHGTLIRDDTEKRHARRRAIKLLGVIAFTGTSTWLLRDNPVWREWHADHRTATS 140 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTR 173 L DG+ + LNT S DV FD R V L GEI +TTA D+ +PF V T Sbjct: 141 ERRTIVLADGTRIMLNTASIIDVHFDNAIRLVTLIRGEILVTTAPDSASGTGQPFIVETD 200 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 QG+L ALGT F VRQ++N + + + + VE+ A A Q R++ AGE + F+ + + Sbjct: 201 QGRLRALGTRFAVRQRENDSHVSLFEGMVEIRPADASDQARVLQAGEQISFTRNAIETPQ 260 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 +D + SW +L + PL + I L RYR G L CDP ++ L++SG +P+++T+ +L Sbjct: 261 TIDTHAASWVTGMLVVQEMPLTDFIDELARYRPGYLSCDPELSHLKVSGIYPIEDTERVL 320 Query: 294 NVIAQTLPVKIQSITRYWINIS 315 +++ P++I S+TRYW+ I Sbjct: 321 DMLLHVHPIEIYSLTRYWVAIR 342 >UniRef50_Q1GXU4 Putative FecR n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXU4_METFK Length = 320 Score = 310 bits (794), Expect = 5e-83, Method: Composition-based stats. Identities = 117/320 (36%), Positives = 172/320 (53%), Gaps = 6/320 (1%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M PL D L A+ W + + +A ++W Q + ++ AWQ+ + + Sbjct: 1 MKPLDIDPS--ILEQAADWLVQMHSGEGNAVNDAEIERWRSQSEQHEVAWQRAQQFIGIV 58 Query: 61 GGVPGDVASRALHDT--RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 +P ++ AL RR + K +LL + WQ W+++ G +DY A G Sbjct: 59 HTLPPELGKAALQRPVSPARRRAIKKLAVLLALSPAAWQAWRTQPWLGYTSDYHVATGRQ 118 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQ 176 +L DG+ L LNT ++ DV +D HQR VRL GE+ ITTA D RPFRV TR G Sbjct: 119 QHIKLADGTALVLNTATSIDVIYDQHQRLVRLKRGELHITTATDPSGRNRPFRVQTRDGM 178 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ALGT F++RQ D+ + L V AVE+ S+P +K I+ AG +F A + +P+ Sbjct: 179 ARALGTRFSIRQLDHSSHLAVFDSAVEITPKSSPNRKTIIQAGSQTEFGAMDVQQPRPVS 238 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + +WT +L D+PL V+ L RY GVLRC P + LR+SGTFPL LN++ Sbjct: 239 EAQEAWTHGMLVVRDQPLAAVVDELRRYHVGVLRCHPDIGRLRVSGTFPLTEIGRTLNLL 298 Query: 297 AQTLPVKIQSITRYWINISP 316 +TLP+ + ++ YWIN+SP Sbjct: 299 QRTLPISVARVSPYWINLSP 318 >UniRef50_C6XE50 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE50_METSD Length = 333 Score = 309 bits (793), Expect = 6e-83, Method: Composition-based stats. Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 7/312 (2%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA 71 L+ A+ W+A+L QQ A WQ W EQD ++ AWQQVE++ + V D A + Sbjct: 17 TLQQAAEWFAMLHAGEFDAQQRAAWQAWLEQDNTHRMAWQQVESVLRKFQHVEDDAARQT 76 Query: 72 LHDTRLTRRHVMKGL-LLLLGAGGGWQLWQSETGEGL----RADYRTAKGTVSRQQLEDG 126 L RR +K + L L + GGW + + + A + T G R QL DG Sbjct: 77 LRTISQGRRRAVKSIMALCLLSAGGWGIARQPAVQQWSGILMAQHTTRIGERRRMQLADG 136 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEF 184 S+L +NT SA ++ + + + + L GE+ + TA D +Q RPF + TR G+L ALGT F Sbjct: 137 SILWMNTASAINMHYSSKEPRIELIAGEVWVQTATDPMQPGRPFLISTRHGELQALGTRF 196 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 V + + V + AV + L A IV AGE F D SWT Sbjct: 197 NVLDDGQCSHVAVFEGAVAIRLPQAGQPGLIVQAGEQSSFDGISIRPAHEADPAMESWTH 256 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 +L + PL E ++ L RYR G L DPA++ LR+ G FPL++TD L+++ QTLPV++ Sbjct: 257 GMLVADNLPLPEFVSRLERYRRGHLGYDPALSHLRIVGAFPLQDTDRALHLLEQTLPVRV 316 Query: 305 QSITRYWINISP 316 + +W+ + P Sbjct: 317 HRLLPWWVTLEP 328 >UniRef50_B3PJT3 Transmembrane sensor n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJT3_CELJU Length = 332 Score = 308 bits (790), Expect = 1e-82, Method: Composition-based stats. Identities = 113/318 (35%), Positives = 172/318 (54%), Gaps = 13/318 (4%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 R A WY +++ + + + + W + AW +++++RN L GVPG++A Sbjct: 13 PDIRRQAIAWYVLMNSGEATAAERSACEHWLALHPQHADAWSRLDSVRNALAGVPGNIAI 72 Query: 70 RALHDTRLTRRHVMKGLL-LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 L RR ++KG L LG G G +W+ + AD++T G + L+DGS Sbjct: 73 PTLTGGNTNRRGLLKGGAWLALGLGSGALMWREQPWRTYMADFKTRTGEQRQFTLDDGSQ 132 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD-----------ALQRPFRVLTRQGQL 177 L LNT + D+RF H R + L +GE+ I TA D RPF + T QG++ Sbjct: 133 LLLNTDTQIDLRFSNHTRLLHLLHGEVLIQTAADQSGSFDESRSRKASRPFEIQTAQGRI 192 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT F VR Q ++T + V +HAVE+ L + A R + AG+ ++FS +P+ Sbjct: 193 RALGTRFVVRDQQDYTLVTVLEHAVEIRLQNRSAPVR-LEAGQQVRFSRERVEQPQPVSA 251 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W L+ +D+PLGEVI L RYR G+LR P + +R+SG FP+K+TD L V+A Sbjct: 252 NADAWVHGQLAVNDQPLGEVITELARYRPGILRISPEASAIRVSGVFPVKDTDRTLAVLA 311 Query: 298 QTLPVKIQSITRYWINIS 315 P++I + T YWI I Sbjct: 312 SRFPIRINATTPYWIRIE 329 >UniRef50_A6SVZ8 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SVZ8_JANMA Length = 334 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 116/316 (36%), Positives = 169/316 (53%), Gaps = 8/316 (2%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVE----NLRNQLGGVP 64 Q + A W L A WQ+W D +++ AW +E LR ++ GV Sbjct: 10 NPQVIDKAVEWLVHLWSGSADLDSRAAWQKWRAADPEHERAWLHIEDVNQQLRGRMNGVS 69 Query: 65 GDVA-SRALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 D A + +RR +K +++ G W ++ + L ++ RTA G + Sbjct: 70 ADTAIASIAQPASRSRRKALKTFSVVVTVGTAAWLSSETMLWKTLTSEIRTATGERLNFK 129 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQLTAL 180 L DG+ L LNT +A +VR+D+ R V+L GE+ ITTAKD+ RPF T G++ AL Sbjct: 130 LADGTQLELNTDTAVNVRYDSALRLVQLVRGELLITTAKDSVSPARPFMAETVAGRILAL 189 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT+FTVRQ + +Q+ V + AVE++ A+ P Q ++AG++ F+A Sbjct: 190 GTKFTVRQDGDISQVAVLEGAVELIPANNPGQVVRLDAGQAGSFNAEGALTPPQAISAQA 249 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +WT+ +L SD L + IA L RYR G L CDPA AGLRLSG FPL + IL + + L Sbjct: 250 AWTEGVLIASDMRLDDFIAELKRYRPGHLSCDPASAGLRLSGVFPLNDMQKILTSLTEVL 309 Query: 301 PVKIQSITRYWINISP 316 PV++Q+ TRYW I P Sbjct: 310 PVRVQTFTRYWTRIVP 325 >UniRef50_A6V0K5 Probable transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=A6V0K5_PSEA7 Length = 317 Score = 303 bits (777), Expect = 5e-81, Method: Composition-based stats. Identities = 110/316 (34%), Positives = 172/316 (54%), Gaps = 6/316 (1%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P Q A W L G + WQ+W + +++ AW+ +E + +L G Sbjct: 4 PAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAG 63 Query: 63 VPGDVASRALHDTR-LTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSR 120 + +A ++ R RR +K LL++L AGGG W L ++ + + ADY T+ G R Sbjct: 64 IGTPLALAVVNAPRSAQRRRALKTLLVMLAAGGGAWGLRENGSLQRWSADYATSVGERRR 123 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS + LN+ +A DVRFDA +R + L GEI ++T D RP V + +G+L + Sbjct: 124 LALADGSRVELNSDTAVDVRFDAGERRLLLLRGEIQLSTGHDP--RPLHVYSAEGRLRPV 181 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F VRQ T++ V + AV+V + Q ++ +G L F GA +PL S Sbjct: 182 GTRFDVRQFAGRTRVAVHEGAVQVE--NRGGQGLLLPSGRQLDFDRERLGAPQPLPVGSG 239 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +WT +L + L E +A ++RYR G L CDP + GLR+SG++PL +++ IL + L Sbjct: 240 AWTDGMLVAAGMRLDEFLAEVSRYRPGRLGCDPRIGGLRISGSYPLDDSERILATLPTVL 299 Query: 301 PVKIQSITRYWINISP 316 PV+++ +TRYW+ + P Sbjct: 300 PVEVRRVTRYWVGVHP 315 >UniRef50_A6T3T5 Fe2+-dicitrate sensor, membrane component n=2 Tax=Betaproteobacteria RepID=A6T3T5_JANMA Length = 329 Score = 302 bits (775), Expect = 8e-81, Method: Composition-based stats. Identities = 121/322 (37%), Positives = 167/322 (51%), Gaps = 11/322 (3%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 D Q R A W L VS Q W Q D+ AWQ++E++ N+L G Sbjct: 7 ESTLDVSPQIARRAVEWLVALQSGDVS---REALQAWLAQHPDHVRAWQRIESVNNKLRG 63 Query: 63 VPGDVASRALH-----DTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKG 116 V + + H RR +K L G + + AD RTA G Sbjct: 64 VASPLTTALAHATLTAPRSNKRRAAIKTLATFFFVGATAYMAEEYLPWRAWSADERTALG 123 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQ 174 L DG+ L LNT +A +VRF +R V L +GEI ITTAKDAL+ RPF V T Q Sbjct: 124 ERRTIVLVDGTELVLNTDTAVNVRFTEQERRVVLLWGEIMITTAKDALELPRPFVVQTAQ 183 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G+L +GT F VRQQ ++LDV + AVE+ KR++ AG+ +QF+ Sbjct: 184 GELQPVGTRFVVRQQTEVSRLDVFEGAVEIRPKDGAGLKRVIQAGQRVQFTHDGISDPVI 243 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 L + +WT+ ++ S L + +A L+RYR G L CDPA+A +R+SG++PL +TD IL Sbjct: 244 LKSDDGAWTEGMIVASGMRLQDFLAELSRYRRGRLTCDPAIADMRVSGSYPLTDTDLILT 303 Query: 295 VIAQTLPVKIQSITRYWINISP 316 + TLPV+I +TRYW+ I P Sbjct: 304 ALGSTLPVEIHFMTRYWVTIRP 325 >UniRef50_B0KIL8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas RepID=B0KIL8_PSEPG Length = 307 Score = 302 bits (775), Expect = 8e-81, Method: Composition-based stats. Identities = 121/306 (39%), Positives = 169/306 (55%), Gaps = 4/306 (1%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 ++ L A WY L VS WQ W D + AWQ++E L+ +LG P +A Sbjct: 2 KRTLAQAVDWYVRLHDSAVSDTTRREWQAWLAADPQHAQAWQRIEQLQQRLGQAPAGLAG 61 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 L R RR +K L +LLG G W+ ADY T G L DGS L Sbjct: 62 TTLEQARQQRRAAVKMLAMLLGVGVV--GWRGYQVSPWGADYSTRVGQRRHFTLADGSRL 119 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 L+T S ADV+FD QR + L GEI + TAKD RP V T +G++ ALGT FTVRQ Sbjct: 120 VLDTDSRADVQFDGTQRLIVLHQGEILVETAKDT--RPLSVQTAEGRVLALGTRFTVRQG 177 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSF 249 +++ V+ HAVEV A Q AG+++ F+A G + P + ++WT+ +L Sbjct: 178 AGISRVTVEAHAVEVQPRLAIGQTLRAEAGQAVSFTADTAGPLLPAVAQGSAWTQGMLVV 237 Query: 250 SDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 D L +V+A L+RYR+G L C P VAGLRLSGTF L +++ +L + +LPV+++ +TR Sbjct: 238 VDWRLEDVVAELSRYRHGYLGCAPEVAGLRLSGTFLLDDSEGVLANLEDSLPVRLRRLTR 297 Query: 310 YWINIS 315 YW+ + Sbjct: 298 YWVRVE 303 >UniRef50_A6SXC7 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXC7_JANMA Length = 330 Score = 299 bits (767), Expect = 7e-80, Method: Composition-based stats. Identities = 114/314 (36%), Positives = 166/314 (52%), Gaps = 11/314 (3%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA 71 L A+ W+AVL VS ++ +W W + ++++ AWQ+VE + N L +P A Sbjct: 15 TLEQAAEWFAVLRSGAVSDEERQQWHAWLDLREEHRLAWQRVEAISNGL-ALPKAAPEAA 73 Query: 72 LHDTR---LTRRHVMKGLLLLLGAG-GGWQLWQSETGE----GLRADYRTAKGTVSRQQL 123 L RR +K L L G GW + ++ + L ADYR+A G + L Sbjct: 74 NAALSAAVLQRRRSLKMLSLFAVTGLAGWGVSRNSAVQTVLADLNADYRSAVGEIRNLTL 133 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTALG 181 DGS + LNT S+ D +DA R ++L GE+ I T D + RPF V + +G L ALG Sbjct: 134 ADGSEIWLNTNSSLDQDYDAQIRRIKLRKGEVLIATHPDTQSPARPFIVYSAEGSLRALG 193 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTS 241 T F VRQ D T+L V + VEV AP +RI+ +G+ + F+ SE AV D + Sbjct: 194 TRFNVRQLDGKTRLSVLEGRVEVAPLDAPGARRIIESGQQVDFNRSEVLAVAAADPTQQA 253 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 W++ +L + PL I L RYR+G L CDPAVA LR+ G FPL D L ++ +LP Sbjct: 254 WSQGLLVADNMPLASFIEELARYRSGYLACDPAVADLRVVGGFPLNQPDQALAMLEASLP 313 Query: 302 VKIQSITRYWINIS 315 V++ +W+ + Sbjct: 314 VRVHQTLPWWVTVR 327 >UniRef50_A6T0J4 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0J4_JANMA Length = 327 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 122/312 (39%), Positives = 170/312 (54%), Gaps = 11/312 (3%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 ++ + A++W L + + A ++W EQ ++Q AW L G VP + Sbjct: 18 KRIVMDAANWLVKLHSQEMDASDHASLKRWCEQSTEHQRAWHAANELARNFGAVPAGLGL 77 Query: 70 RALHDTRLTRRHVMKGLLLLLG-AGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 L R RR MK L ++ A W W R +Y+TA G S L DGS Sbjct: 78 TTLGRQR-NRRAAMKTLAIVCTLAPTSWLAWTHMA----RDNYQTATGERSTYTLADGSS 132 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTALGTEFTV 186 L LNT S+ D+ FD QR +RL GE+ + TAKD RPF V T QG + ALGT F V Sbjct: 133 LMLNTGSSVDIVFDDKQRLLRLRAGEVLVQTAKDSAPNPRPFIVQTGQGSVRALGTRFIV 192 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE--STSWTK 244 RQ+++ T++ V +HAVEV A A I+ AG F ++ A+ PL + +++WT+ Sbjct: 193 RQREDATEVAVLEHAVEVR-ALGVADPVIIAAGYGGSFGKTDIAALTPLANNVNASAWTQ 251 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 IL + L + +A L RYR G+LRCDPAVA LR+SG F NT+ LNV+ +TLPV + Sbjct: 252 GILIADRQRLEDFLAELGRYRPGILRCDPAVADLRISGVFQTSNTEQALNVLQETLPVTV 311 Query: 305 QSITRYWINISP 316 S TRYW+ + P Sbjct: 312 LSRTRYWVTVLP 323 >UniRef50_A9C159 Anti-FecI sigma factor, FecR n=2 Tax=cellular organisms RepID=A9C159_DELAS Length = 353 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 122/329 (37%), Positives = 172/329 (52%), Gaps = 16/329 (4%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 ++ + + A WYA L + A WQ+W+E ++Q AW+ + L++ L VP Sbjct: 25 PAQAQARIRQEAIAWYARLCSGDATDADRAAWQRWHEAHPEHQRAWRHFDALQSMLQRVP 84 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQL-WQSETGEG----LRADYRTAKGTVS 119 G +A+ L +R +RR V++G+ L+G+G L WQ G+G ADYRT G Sbjct: 85 GHLAASTLQASRRSRRRVLRGIGALVGSGAVAGLSWQLAGGQGGVRSWLADYRTGTGERR 144 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--------ALQRPFRVL 171 L DGS LTLNT+++ DV D +R + L GEI + TA RPF V Sbjct: 145 TVTLADGSELTLNTRTSVDVSMDPVRRLLVLREGEILVQTAHSLSGPGAGAKDGRPFMVH 204 Query: 172 TRQGQLTALGTEFTVRQQDN---FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 T QG++ ALGT FTVR Q T + V Q AVE+ P++ + AG+ FS + Sbjct: 205 TPQGRILALGTRFTVRSQGGAGGDTVVSVLQDAVEIQPLQDPSRSLRLQAGQQANFSRNG 264 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN 288 + D SW L L +V+ L RYR G L CDPAVAGLR+SG FPL + Sbjct: 265 MLPAQAADPAQVSWVGGSLIVDGWRLDDVVRELARYRPGRLACDPAVAGLRVSGVFPLAD 324 Query: 289 TDAILNVIAQTLPVKIQSITRYWINISPL 317 TD L VI + PV+ ++RYW+ + P+ Sbjct: 325 TDKALAVITRAFPVRAAGLSRYWLTLVPV 353 >UniRef50_B8ECR9 Anti-FecI sigma factor, FecR n=3 Tax=Shewanella baltica RepID=B8ECR9_SHEB2 Length = 329 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 107/311 (34%), Positives = 160/311 (51%), Gaps = 6/311 (1%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 A+ +A+ W A L + + Q QQW +Q ++ AWQ++ + + +P + Sbjct: 18 DAIEAAAGWMARLLADDATEQDSINCQQWRDQSSLHEQAWQRMCQITGKFASLPKGTGIQ 77 Query: 71 ALHDTR---LTRRHVMKGLLLL-LGAGGGWQLW-QSETGEGLRADYRTAKGTVSRQQLED 125 L ++RR + L L +G W Q+ G L+A YRT LED Sbjct: 78 VLEKVSQSVVSRRRFLNVLALAGIGVTATWLGASQTRLGRSLQAQYRTGANETRTFTLED 137 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 G+ LTLN +A DV F A +R ++L GEI I T ++ +R F V T GQLTALGTEF Sbjct: 138 GTRLTLNIDTAVDVDFSAEKRQIQLHQGEILIKTGHESPRRQFLVTTHFGQLTALGTEFC 197 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VRQ +++ ++ V + AVE AS +R V+AG+ +F + KPL + + SW Sbjct: 198 VRQYEHYARVAVTEGAVEAYAASGVKPQR-VDAGQQTRFDKTMIAPPKPLQNAAISWRHG 256 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 L + + I + RYR G D AVA L +SG F L++TD L +A +L V++Q Sbjct: 257 KLVAEGMRVADFIEEIGRYRPGFTLYDSAVANLTISGVFSLQDTDLALQSLASSLSVELQ 316 Query: 306 SITRYWINISP 316 T YW+ + P Sbjct: 317 YRTAYWVKVIP 327 >UniRef50_B4X4W9 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4W9_9GAMM Length = 327 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 107/326 (32%), Positives = 160/326 (49%), Gaps = 14/326 (4%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P L+ A+ W+A + E V Q +WQ W ++Q AW VE + + Sbjct: 2 PQPDLPAHHILQQAAQWFATMLDEDVRQQDRDQWQAWLNAHPEHQRAWHYVEQVGQRFQQ 61 Query: 63 VPGDVA----SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG--------LRAD 110 + +HDTR +R L L + W +W T G L AD Sbjct: 62 AQQQAGTTGARQIIHDTRSSRITRRTLLGSGLASVATWLIWSQTTLPGTARQLAHTLSAD 121 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 YRTA G + L DG L LNT +A D+ + R ++L GEI I TAKDAL RPF V Sbjct: 122 YRTATGEQRQLTLSDGGQLWLNTATAVDISYTDTIRHIKLRDGEILIETAKDALARPFVV 181 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 T QG L ALGT F+V+Q+D TQ+ V + AVE+ + Q+ + AGE F+AS Sbjct: 182 TTLQGSLRALGTRFSVQQRDANTQISVYEGAVEINATT--GQRLTLQAGEQTSFTASAIA 239 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTD 290 +W + ++ + L E++ L+RYR+G L D +VA L++ GT+P+ D Sbjct: 240 KPHKAQHSRVAWQQGLIVADNISLQELVEELSRYRHGYLAVDASVANLKVMGTYPIDKPD 299 Query: 291 AILNVIAQTLPVKIQSITRYWINISP 316 L ++ LP++ + + +W+ + P Sbjct: 300 HTLTMLENALPIRTRRVLPWWVTLEP 325 >UniRef50_A6SX53 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SX53_JANMA Length = 330 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 111/317 (35%), Positives = 160/317 (50%), Gaps = 10/317 (3%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + ++ A W L SP E + W D ++ AWQ++ L Sbjct: 11 EIDASIVKQAIVWLVTLQSGGASPTDERACEAWRAADSRHEQAWQRLHGLGQDFRASSNV 70 Query: 67 VASRALHDT-----RLTRRHVMKGLLLLLGAGGGWQLWQSET-GEGLRADYRTAKGTVSR 120 +AS L R RR V+K L L GG + + + + A+++TA G R Sbjct: 71 LASPLLRSVLRNSERNNRRIVLKSLFGLALIGGTATVVRKQPAWQSAMAEHQTATGEQRR 130 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DG+ + LNT +A DV FD R V L GEI I TA+D RPF + T G + + Sbjct: 131 IVLADGTRILLNTATAIDVHFDDQLRLVILHRGEILIETAQDEAGRPFELATSNGTIRPI 190 Query: 181 GTEFTVRQQDN--FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 GT FTVR D T + V + AV V +NAGE F+ A LDD Sbjct: 191 GTRFTVRHSDRPSSTAVAVLEGAVRVTPGQ--GNSVRINAGEQTHFTELAALAPFALDDS 248 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 + +WT +L L + + L RYR GVLRCDPAVA L +SG+FPL++ DA+L ++A+ Sbjct: 249 AAAWTDGVLVVERMRLADFVTELDRYRPGVLRCDPAVADLLVSGSFPLRDPDAVLALLAE 308 Query: 299 TLPVKIQSITRYWINIS 315 TLP++++++TRYW ++ Sbjct: 309 TLPLQVRTLTRYWATVT 325 >UniRef50_B0KG70 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonadaceae RepID=B0KG70_PSEPG Length = 311 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 111/307 (36%), Positives = 165/307 (53%), Gaps = 1/307 (0%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + L +A+ WY L+ S + W+QW + + AW +VE L+ Q +P A Sbjct: 4 KTLEAAATWYVQLNDGANSEARTQAWRQWLQASPQHAAAWARVEKLQQQWAMLPPQAALS 63 Query: 71 ALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 +L + RR V+K L LLL G GGW + L A RT S QL DGS L Sbjct: 64 SLGAAQAQRREVLKVLSLLLAMGAGGWLAAEQVPYRSLLAQQRTGSRERSTLQLVDGSQL 123 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 LN +A DVR+DA R ++L+ GEI + D QRPF V T G + A TEF++R+ Sbjct: 124 ELNVGTALDVRYDAKVRAIQLYQGEILVRPVSDLQQRPFIVHTDDGSVLARSTEFSIRKL 183 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSF 249 T++ V Q +VEV + + AG+ + F +F + L +ST+W + +LS Sbjct: 184 ARQTRVGVLQGSVEVRPQRHLDRLLQLQAGQQVSFDQDDFATAQALPADSTAWLQGMLSV 243 Query: 250 SDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 +D LG+ I L RYR GVLRC A+ + +SG F + +TD L + +TLPV++ ++R Sbjct: 244 NDWRLGDFIEELGRYRPGVLRCASAIRAMSISGAFRIDDTDIALANLPKTLPVRVHYLSR 303 Query: 310 YWINISP 316 YW+++ P Sbjct: 304 YWVSVEP 310 >UniRef50_C6XBX8 Anti-FecI sigma factor, FecR n=2 Tax=Betaproteobacteria RepID=C6XBX8_METSD Length = 348 Score = 293 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 116/317 (36%), Positives = 164/317 (51%), Gaps = 13/317 (4%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 A+ W +L S RWQQW + D++ AWQ +E + +L + Sbjct: 31 VSEAVANQAAEWLTLLMSGEASEDDRQRWQQWRMEHADHERAWQHIETIIGRLKIMEPHA 90 Query: 68 ASRALHD-------TRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVS 119 A + L RR + LL AG G ++ + + ADY + GT Sbjct: 91 AYKTLSPYTRREGLHSPDRRKAIVMLLWAGAAGASGLLASRTPAWQQMVADYHSDTGTQR 150 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK-DALQRPFRVLTRQGQLT 178 L+DG+++TLNT SA +V F QR VRL GE+ ITT + RPF V T +G++ Sbjct: 151 TITLDDGTVITLNTASAINVHFSHQQRLVRLVAGEVLITTGHATSDARPFLVETAEGRIR 210 Query: 179 ALGTEFTVRQQ-DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT F VRQQ D +++ V + AVE+ L AP + AG+S F+ + + L D Sbjct: 211 ALGTRFAVRQQPDGSSRVAVLESAVEITLEQAP--SHRLPAGQSATFTRNSL-IINSLQD 267 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 T+WTK + LG+ L+RYR G++RC+PAVA LR SG FPL++TD IL + Sbjct: 268 SDTAWTKGQIIADQMRLGDFATELSRYRPGLIRCNPAVADLRFSGVFPLEDTDRILATLP 327 Query: 298 QTLPVKIQSITRYWINI 314 LPV+I TRYW+ I Sbjct: 328 SVLPVRILLRTRYWVTI 344 >UniRef50_C3K7W7 Putative iron uptake regulator protein n=2 Tax=Proteobacteria RepID=C3K7W7_PSEFS Length = 317 Score = 293 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 112/322 (34%), Positives = 161/322 (50%), Gaps = 12/322 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MNP + L A+ W L + + QW + + AWQ+ E + Sbjct: 1 MNPSIDPL---ILGEAADWMVQLQSGSATDEDRRAIAQWQGRSAQHAQAWQRAEAILGDF 57 Query: 61 GGVPGDVASRAL----HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKG 116 VPG +A L L RR + LLL W ++ + + AD TA G Sbjct: 58 NSVPGAIAGDTLKRIGRKQSLGRRQALGLLLL--AGPATWLAYRQKPWQPWTADQHTAIG 115 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQ 174 L DG+ L +NT S+ ++ F R + L GE+ ITTAKD R F V TR Sbjct: 116 EQRHLTLPDGTRLLINTASSLNIAFTDQVRRIELLQGEVMITTAKDPAPRHRAFIVQTRH 175 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G ALGT F+VR + +++ V AVE+L A I+ AGE F + AV+P Sbjct: 176 GTARALGTHFSVRVAEQSSRVAVLDGAVEMLPEHARHG-LILKAGEQSAFGSDGVAAVQP 234 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 L+ +T+W +L L +++ L RYR+GVLRC +VAGL +SG FPL++TDA L Sbjct: 235 LEISATTWENGMLLAQQMRLADLLDELGRYRHGVLRCHDSVAGLTVSGAFPLRDTDASLR 294 Query: 295 VIAQTLPVKIQSITRYWINISP 316 ++ +TLPVK+ S+T YW+ + P Sbjct: 295 LLQETLPVKVSSLTGYWVTVEP 316 >UniRef50_B0KJM3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KJM3_PSEPG Length = 327 Score = 292 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 115/312 (36%), Positives = 167/312 (53%), Gaps = 6/312 (1%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + L A+ W LS V+ Q A W W AWQ+ E L +L G+P ++ Sbjct: 13 EVLEEAAEWLMTLSAGDVTEAQRADWLAWRSSSPARAQAWQRAERLMGKLEGLPPALSMS 72 Query: 71 ALHDTRLTRRHVM--KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 AL R M + LLL GW W+ G ADYR++ G + L DG+ Sbjct: 73 ALDRPADPGRRAMISRVALLLAVLPAGWASWRLTDQHGWAADYRSSVGECRQLTLADGTQ 132 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTALGTEFTV 186 + LNT SA D+RFD ++R ++L GEI + TA D RP RV TR+G++ ALGT F+V Sbjct: 133 VYLNTDSAIDIRFDGNERFIQLRRGEILVQTAPDIVVPARPLRVGTREGRMQALGTRFSV 192 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKR-IVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 R++D T L V + AV + A A +V AGE + F+A G P+D +T+WT+ Sbjct: 193 RERDGRTWLAVVEGAVRIEPAGGGANAGAVVQAGERVDFNAHRVGRPMPVDLTATAWTQG 252 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 +L L E +A L RY+ G +RCDP +AGLR+SG FP+ +T L+++ T +++ Sbjct: 253 MLLADSMRLDEFVAELARYQRGFIRCDPRIAGLRISGAFPVSDTRRSLSMLESTYALQVS 312 Query: 306 -SITRYWINISP 316 + YW +SP Sbjct: 313 AHMNGYWTLLSP 324 >UniRef50_Q82SB2 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82SB2_NITEU Length = 338 Score = 292 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 107/310 (34%), Positives = 157/310 (50%), Gaps = 5/310 (1%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA--S 69 L+ A W + + + RWQ W D + AW QV+ QL + A Sbjct: 25 VLQQALQWQVIFWSGEATDRDRMRWQSWLAADPAHARAWAQVQRTDEQLQTLASPAAEVL 84 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGG--GWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 R+ R R + G+ LL G G L Q+ + + AD T G +L DG+ Sbjct: 85 RSADARRCKARRTVLGMAGLLAGAGIMGCGLRQTAQWQMMMADDHTGYGERRNIELADGT 144 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 +TL + +A DV + A R + L GEI I TA D+ RPF V T +G + ALGT F VR Sbjct: 145 QVTLGSATAIDVCYSAQARQLLLRTGEIFIVTAPDSADRPFLVQTTRGSVQALGTRFNVR 204 Query: 188 QQDNFTQLDVQQHAVEVLLAS-APAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 + Q+ VQ AV + A P ++AG+ F ++ A + L +T+WT+ + Sbjct: 205 ESGEQIQVAVQDGAVAIRPAGMNPGDVVRLDAGQQTCFDHTKVEAAEALQISATAWTRGL 264 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 L L + + L RYR+GVLRCDPAV L +SG + L +TD L ++AQ LPV++Q+ Sbjct: 265 LVAERMRLEDFLVELGRYRSGVLRCDPAVRDLIVSGVYSLDDTDQSLRLLAQALPVQVQT 324 Query: 307 ITRYWINISP 316 +TR+W + P Sbjct: 325 VTRWWTIVGP 334 >UniRef50_B4WXE6 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alcanivorax sp. DG881 RepID=B4WXE6_9GAMM Length = 326 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 112/318 (35%), Positives = 160/318 (50%), Gaps = 14/318 (4%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG---- 65 Q L A+ W+A+L + + RWQQW Q D+ WQ VE++ Q Sbjct: 9 HQILSDAADWFALLRSGQACESDKLRWQQWLRQHPDHLRGWQMVEHIEQQFSTASANHPA 68 Query: 66 --DVASRALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGE----GLRADYRTAKGTV 118 + + R+ RR V+ GL L +G GG GW W+ G A YRT G + Sbjct: 69 HTEATLKQARHNRIQRRSVITGLALAIGTGGLGWMSWRHSPLPTLVAGWNAQYRTGTGEI 128 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +L DGS L LNT SA + D QR +++ GE+ I T K A RP V T QGQL Sbjct: 129 RALELADGSRLWLNTNSAINTVLDGPQRHIQVIQGEVLIETGK-ADPRPLVVFTPQGQLQ 187 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 LGT FTV ++ + T L V AVE+ + QK +++ + +FSA+ + P D Sbjct: 188 PLGTRFTVCRETDTTFLAVYDGAVEIT--NQARQKSVLHPQQQTRFSANALQPIHPADPA 245 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 +W K IL D LG+++ L RY++G + PAVA LR+ G FPL + L+++A Sbjct: 246 RETWHKGILVADDIRLGDLVDELGRYQHGYINLSPAVADLRVFGGFPLTDPQQALDMLAS 305 Query: 299 TLPVKIQSITRYWINISP 316 LP+++ W NI P Sbjct: 306 ALPIRVTRPLPGWTNIHP 323 >UniRef50_B7VAW3 Probable transmembrane sensor n=7 Tax=Pseudomonas aeruginosa RepID=B7VAW3_PSEA8 Length = 316 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 116/307 (37%), Positives = 158/307 (51%), Gaps = 6/307 (1%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA 71 L A+ W L + QW ++ + AW++ E L LG +P +A Sbjct: 13 ILDEAAEWLVRLQDSGCTDDTRQACAQWRQRSPQHAHAWERAERLLQCLGRLPPALALPT 72 Query: 72 LHDTR-LTRRHVMKGLLLLLG-AGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 L R L RR +K L L+LG A G WQ+E AD RT G R L DGSLL Sbjct: 73 LGRERGLDRRRAIKHLALVLGGASLGLATWQAEPLRDWLADQRTGVGEQRRLTLPDGSLL 132 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 TLNT SA D+ FDA QR VRL GEI + + D RPFRV T + +L A F VRQ+ Sbjct: 133 TLNTDSAVDLAFDASQRLVRLLRGEIFVDSRADP--RPFRVATAEARLHAGAARFNVRQE 190 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSF 249 T++ V VE+ + R + +GES++ A D +WT+ +L Sbjct: 191 MAATRVAVLAGRVELSPLH--GRGRWLESGESVRLGADGEARRLAFDGLPDAWTRGMLMA 248 Query: 250 SDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 PL EV+A L RYR GVLRCDP +A L +SG +PL + L ++ T P+K++ +T Sbjct: 249 DRMPLAEVLAELARYRRGVLRCDPQLARLAVSGAYPLLDLRRTLGMLQATYPLKVRGVTD 308 Query: 310 YWINISP 316 YWI++ P Sbjct: 309 YWISLVP 315 >UniRef50_A9C156 Anti-FecI sigma factor, FecR n=3 Tax=Comamonadaceae RepID=A9C156_DELAS Length = 327 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 114/316 (36%), Positives = 168/316 (53%), Gaps = 6/316 (1%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + + + L A+ W A S ++A +W Q ++ WQ E L+ + VP Sbjct: 11 MQAADARILDEAARWLARRHASDFSAAEQAELARWRSQSSRHEQIWQCAEQLKGRFNTVP 70 Query: 65 GDVASRALHDTRLT--RRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQ 121 G V L+ R + RR +++ +L L GW W+ + ADYRTAKG Sbjct: 71 GAVGMATLNRARPSAARRQLLRSAVLALATPALGWLAWRHLPWQDWTADYRTAKGERRAV 130 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTA 179 L DGS + LN SA VR D R +R GEI + TA +PF V T GQ+ A Sbjct: 131 TLADGSRVQLNMASAISVRMDGTARRIRQHAGEILVETAHAPPYASQPFMVQTDDGQMQA 190 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F VR+ ++ T L V + AV V A A A+ +V+AGE L F A +P+ Sbjct: 191 LGTRFIVRKLEHGTALAVLEGAVRVTPA-ASAKAVVVHAGEQLHFDGHGASATRPVAARD 249 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 ++WT +L + L + +A L+RYR G+++CD VA LR+SGT+ L++TD IL ++AQT Sbjct: 250 SAWTLGVLYAENLRLQDFLAELSRYREGLVQCDDDVADLRVSGTYQLQDTDRILALLAQT 309 Query: 300 LPVKIQSITRYWINIS 315 LPV++ +RYW+ + Sbjct: 310 LPVRVHERSRYWVTVE 325 >UniRef50_A9BW97 Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BW97_DELAS Length = 327 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 109/313 (34%), Positives = 171/313 (54%), Gaps = 2/313 (0%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP- 64 + + R A W+ L+ + +Q Q+W +++ AWQ++E++ +Q+ G+P Sbjct: 9 SPISAEVARQAVQWWLQLNSGKAQARQHDGLQRWRAASPEHEAAWQRIESMGSQMAGIPM 68 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQL 123 + RR ++ L +LL +G G + +S+ G AD A G L Sbjct: 69 PLARAALAAPGSAGRRRAVQALAVLLVSGAGSAAVVRSQAWRGWTADQVAAVGEQRTLPL 128 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DG + LNT SA ++R+ A +R + L GEI + TA D+L RPF V T G + ALGT Sbjct: 129 PDGGSVVLNTGSALNLRYGAAERVLELVRGEILVQTAPDSLHRPFIVQTAMGAVQALGTR 188 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 FTVRQ+++ ++ V Q AV++ A AP + + AGE F+A + LD +++W Sbjct: 189 FTVRQRESAVEVGVLQGAVQLRPAHAPHAPQRIAAGEQGTFTAQQAVHSGALDTAASAWA 248 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + +L S L + + L RYR G L CDPAVAGL +SG +PL +TD +L + +LPV+ Sbjct: 249 EGMLVASRMRLEDFLVELGRYRRGRLGCDPAVAGLHVSGAYPLADTDRVLAALTSSLPVE 308 Query: 304 IQSITRYWINISP 316 I S +RYW+ + P Sbjct: 309 IHSFSRYWVMVRP 321 >UniRef50_B0KMC8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas RepID=B0KMC8_PSEPG Length = 318 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 115/307 (37%), Positives = 169/307 (55%), Gaps = 4/307 (1%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA 71 + ASHW + + Q+ R+ +W D ++ AWQ++E+L++ L GV D A Sbjct: 13 IVEQASHWLMLQWSGELDKAQQRRFAEWRNADPEHARAWQRLEHLQHTLSGVSADTALAV 72 Query: 72 LH-DTRLTRRHVMKGLLLLLGAGGGWQLWQSE-TGEGLRADYRTAKGTVSRQQLEDGSLL 129 L RR +K L LL AGG + QS+ AD R+ G ++ L DGS L Sbjct: 73 LREQPDARRRQTLKLLSALLLAGGSGYIVQSQLPWREAMADLRSGTGERLQRTLADGSRL 132 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 LN+ SA D++F A +R +RL GE+ + + D QRP V T G + ALGT F+V Q Sbjct: 133 GLNSGSAVDIQFSASERRIRLLAGELLLDSGHDPAQRPLIVDTIAGDVLALGTRFSVYQH 192 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSF 249 D+ Q+D+ + +E+ A + + AG+ FS ++ G + P + + +W L Sbjct: 193 DDKCQVDLFEGELELRPRQA--RAIRLQAGQGCWFSTTQIGDIAPANLNAIAWHDGRLIA 250 Query: 250 SDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 PLG+ A L R+R G+LRCDPAVA L L+G FPL +TD +L + Q+LPVK+ +TR Sbjct: 251 ERMPLGQFTAELARHRAGMLRCDPAVAALPLTGVFPLADTDRVLTALEQSLPVKVHRLTR 310 Query: 310 YWINISP 316 YW ISP Sbjct: 311 YWTTISP 317 >UniRef50_C6XBX0 Anti-FecI sigma factor, FecR n=4 Tax=Proteobacteria RepID=C6XBX0_METSD Length = 333 Score = 289 bits (740), Expect = 9e-77, Method: Composition-based stats. Identities = 112/324 (34%), Positives = 158/324 (48%), Gaps = 14/324 (4%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 L L A+ WYA L S + ARWQ W +++Q AWQ VE++ L + Sbjct: 9 LQPAPSHAVLTQAAEWYARLRDGSASSHETARWQAWLHAAEEHQAAWQYVEDISRGLDPL 68 Query: 64 PGDVASRA-------LHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEG----LRADY 111 V R H TRR V+ L L G G W+ AD+ Sbjct: 69 RTTVDPRQTTHALTKAHARLHTRRRVLITLAALASGGTLGLLSWRQSMLPASMLAWTADH 128 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT G L DG+ L LNT SA +V F A +R + L GE+ I TA D RPF V Sbjct: 129 RTPTGEQRTLTLADGTQLWLNTASALNVHFSASERRIELVQGEVFIETAHDET-RPFLVE 187 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T G++ ALGT F V + TQLDV AVE+ AS+ R+V AG+ +F ++ A Sbjct: 188 TPHGRMRALGTRFNVYLNEAHTQLDVYAGAVEIRTASSAI-SRVVRAGQQSRFDRADITA 246 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 + +WT+ IL + PL +V+ L RYR G L VA L++ G+FPL++TD Sbjct: 247 MATAGAAREAWTQGILVADNIPLRDVVQELRRYRPGHLGVADGVAELKVYGSFPLQDTDR 306 Query: 292 ILNVIAQTLPVKIQSITRYWINIS 315 +L ++A LP++++ +W + Sbjct: 307 VLRMLASALPIRVEQPLPWWTTLE 330 >UniRef50_C6DJA8 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacterium RepID=C6DJA8_PECCP Length = 329 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 109/320 (34%), Positives = 169/320 (52%), Gaps = 11/320 (3%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 P+ DS R A W L + V+ Q WQ+W E DN+ AWQ +E++ L Sbjct: 13 QPIQPDS----AREAVAWLTQLMSDSVTEQDRREWQRWREASSDNEQAWQHIESVCANLS 68 Query: 62 GVPGDVASRALHDTR-LTRRHVMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 + A ++L + RR V+K L +L L G G +++ + L ADY+T G Sbjct: 69 QLNARAAHQSLSTLNGMQRRSVLKALAILCLTGGAGVAGSRTDLWQSLTADYQTQVGEQQ 128 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ----RPFRVLTRQG 175 L+DG+ L LNTQ+A +V + R + L GE+ I T + RPF V T QG Sbjct: 129 HAVLDDGTTLLLNTQTALNVAYGDDLRHLMLIRGEVMIETGQAEKAALYPRPFIVTTAQG 188 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 ++ ALGT F++R QD T++ V AV++ ++V +G++ F+ G ++ Sbjct: 189 KVQALGTRFSLRVQDEHTRVTVYDGAVKLHPQQNGQDVQVVKSGQTATFTTQRCGQIETA 248 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 E +W K L ++ L + + L+RYR+GV+RC P V LR SG FPL +TD IL Sbjct: 249 KAE-PAWVKGQLLADNQRLVDFVDELSRYRSGVIRCQPEVESLRFSGVFPLSDTDNILAA 307 Query: 296 IAQTLPVKIQSITRYWINIS 315 + + LPV+++ +RYW+ I+ Sbjct: 308 LVEALPVQVRYFSRYWVQIA 327 >UniRef50_D0S2I9 Transmembrane sensor n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S2I9_ACICA Length = 318 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 93/316 (29%), Positives = 160/316 (50%), Gaps = 10/316 (3%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 +T L +A+ W +L ++ Q+ +++QW + +++Q A QQ+E + L + Sbjct: 4 ITKIPHHVLDAAADWLVLLHSGEMTALQQQQFEQWKAEKKEHQLALQQMEKFSHGLTNLA 63 Query: 65 GDVASRALHDTR-----LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 G+ S AL + +R+++ L L G E ++DY T G + Sbjct: 64 GNFPSEALVQSNQKFNLAAKRNMLLSLSGLAIVGLSVYF---IPWEKWQSDYHTKVGEIK 120 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 + L+DGS L + + D+ F R ++L GEI I TAKDA RPF V T+ G + A Sbjct: 121 KVSLKDGSQLIMASNCYIDINFTQETRQIKLIDGEIYIETAKDAQHRPFIVETKNGSVEA 180 Query: 180 LGTEFTVRQQ-DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 LGT+F+VRQ+ T++ V +HAV + ++ ++ I+ G+ F PLD++ Sbjct: 181 LGTQFSVRQESSEQTKVKVYKHAVAIEPENSSKRQ-ILKQGQRAFFDEKYISKSLPLDND 239 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 WT+ +L PL +V+ L RY+ G DP + +++SG F LKN + L +A Sbjct: 240 QPYWTQQLLVVDQWPLQKVLDELFRYKKGTYSIDPELKDIKISGVFSLKNPEQSLETLAY 299 Query: 299 TLPVKIQSITRYWINI 314 + +++ + Y +NI Sbjct: 300 SHQLELTYYSPYLLNI 315 >UniRef50_A6SXA7 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXA7_JANMA Length = 333 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 112/317 (35%), Positives = 160/317 (50%), Gaps = 14/317 (4%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV---- 67 L+ A+ W+A+L + +S WQ+W + +++ AW +VE + Q + Sbjct: 14 TLQQAAKWFALLRSDSISDSDRISWQKWLSANAEHRRAWARVEAVSQQFETFTPEPEQSA 73 Query: 68 ---ASRALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGE----GLRADYRTAKGTVS 119 A A R RR +K L LL G W + Q E + +DY TA G Sbjct: 74 AVNALDAASRARKQRRRALKMLTLLCTTGAVSWSVGQLEPVQRSWLAFSSDYSTAVGETR 133 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQL 177 L DGS + LNT SA + R+ A R + L GEI I TAKD RPF V T QG+L Sbjct: 134 DVMLADGSQVWLNTASALNARYQADLRRLVLLGGEILIETAKDPAVPTRPFVVDTAQGRL 193 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT FTVRQ D TQL V + AVE+ +A +I++AG+ + FSA +D Sbjct: 194 RALGTRFTVRQLDGITQLSVYKGAVEITPVAASGSAQIIDAGQQVLFSADGIEIPSAVDP 253 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W K +L D L E + L+RY G L C P VAGLR+ G +PL + ++ Sbjct: 254 ANEAWAKGVLFADDLTLAEFVVELSRYHKGYLACAPEVAGLRVVGAYPLHDMQQTFAMLE 313 Query: 298 QTLPVKIQSITRYWINI 314 LPV +++ +W++I Sbjct: 314 TALPVTVKATFPWWVSI 330 >UniRef50_B0KPG4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KPG4_PSEPG Length = 313 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 122/319 (38%), Positives = 171/319 (53%), Gaps = 12/319 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M Q R A++W+ ++ + VSP Q A +W +++ AWQ+ ++ QL Sbjct: 1 MPNQQPRITAQVARQAANWHMLMLEDAVSPAQRAACNRWRSAAPEHERAWQKALRVQAQL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMK-GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 G +P +A L+ RR VMK L L + A G+ ++ + Y T G Sbjct: 61 GLLPPQLAMGTLNRE---RRQVMKQLLALAIVAPLGYVGYRQLAPQNA---YATDVGQHK 114 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD---ALQRPFRVLTRQGQ 176 + L DG+LL LNT +A DV FDAHQR + L GEI I + +D RP RV QG Sbjct: 115 QLTLADGTLLDLNTDTAVDVNFDAHQRLISLRRGEILIDSGRDSSSPQHRPLRVACEQGL 174 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 L ALGT F VRQ++ TQL V Q AV V + P Q ++AG+ + F A+ GAV P Sbjct: 175 LEALGTRFLVRQREGATQLTVFQGAVLVTPSHGPRQ--TLDAGQQVTFDAAGQGAVTPAR 232 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 ++ + W + L + PL E + L RYR G LRC VA L +SG F L+NTDAIL + Sbjct: 233 EQDSQWIRGQLLVDEMPLREFLGELGRYRPGWLRCQSDVAQLLISGAFQLENTDAILAAL 292 Query: 297 AQTLPVKIQSITRYWINIS 315 TLPV++ TRYW+ ++ Sbjct: 293 PATLPVQVDYRTRYWVTVN 311 >UniRef50_B3PJT6 Transmembrane sensor n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJT6_CELJU Length = 329 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 115/321 (35%), Positives = 170/321 (52%), Gaps = 9/321 (2%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + D + L A W L VSPQ ++ W + Q +Q AW +V+ + QLG Sbjct: 9 SANTADLSQDILHRAMEWQVTLWSGEVSPQDMRAFECWLQVSQQHQLAWHKVQQVNQQLG 68 Query: 62 GVPGDVASRALHDTRL---TRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGT 117 VP +ASR L T + RR ++ GL ++ G G+ + QS + ADYRT +G Sbjct: 69 QVPDQLASRVLRQTAVVDHRRRQLLVGLGIIGSLGALGFGVSQSPQWQMASADYRTGRGQ 128 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQ 174 L DG+ L LNT SA DV F A R + L+ GE+ I T D RP V T Sbjct: 129 RRELILPDGTQLMLNTASAMDVVFSADSRRLILYRGEVQIVTGADTGAGIARPLWVETAA 188 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G + +GT+FT+RQ ++DV + AVE+L Q + AG++ QFS + +++ Sbjct: 189 GVVRPIGTQFTLRQCGKDVKVDVAEGAVELLPKQ--GQGIRLEAGQAAQFSRQQVSSIQT 246 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 ++WT+ +L + LG+ IA L+RY G+LRCDPA A L +SG + LK+T +IL Sbjct: 247 AVATDSAWTRGLLIAEQQRLGDFIANLSRYHTGILRCDPAAADLIVSGVYLLKDTHSILR 306 Query: 295 VIAQTLPVKIQSITRYWINIS 315 + Q LPV++ + YW +S Sbjct: 307 TLEQVLPVRVDTRLGYWTTLS 327 >UniRef50_C1DJ04 Anti-sigma factor, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJ04_AZOVD Length = 313 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 100/309 (32%), Positives = 146/309 (47%), Gaps = 3/309 (0%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 + + A W L WQ+W D +++ AWQ++E++ +L G+P Sbjct: 5 VSERVAQEAVRWLVELQD-DADELLRRDWQRWRAADPEHERAWQRIESVNRRLRGLPPAA 63 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 A A+ L R + G+L L ADYRTA G L DGS Sbjct: 64 ARAAVEGAPLHGRRQVLGMLGLAAVAVPGLWLAGGRARPWLADYRTAVGERRDIGLADGS 123 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 L+LNT SA ++R + R + L GEI + A F + T QG L F +R Sbjct: 124 RLSLNTDSAVNLRLASDSRWLELLRGEIQLEVAPGTAS--FHIATAQGSLLVEQARFNLR 181 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 Q + +L V V V A P + + AG+ ++F + GA +PLD +W +L Sbjct: 182 QYADHCRLGVLDGTVRVRCAGHPDLQASLAAGQQIRFDSQRLGAPQPLDAAVAAWRDGML 241 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 D L + + L RY G L CDP VA L LSGT+PL+++ AIL ++ LPV+I Sbjct: 242 VARDMRLADFLDELGRYHRGWLGCDPRVANLHLSGTYPLRDSLAILAMLEVALPVRISQR 301 Query: 308 TRYWINISP 316 TR+WI++ P Sbjct: 302 TRWWISVQP 310 >UniRef50_Q02NL2 Possible Fe2+-dicitrate sensor n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02NL2_PSEAB Length = 316 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 113/316 (35%), Positives = 170/316 (53%), Gaps = 3/316 (0%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M L + + L +A+ WY E + + W++W E D ++ AW+++E L+ Q Sbjct: 1 MQGLTMELEIEVLEAAATWYVRFGAEPPNDGERQAWREWLEADPRHRRAWERIERLQGQW 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGA-GGGWQLWQSETGEGLRADYRTAKGTVS 119 +P + + L R RR ++K L LL A G GW L A RT G Sbjct: 61 AALPAETSLHTLAGVRARRRALLKTLALLACAAGSGWLASGGLPYRALLAGERTGVGERR 120 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 + +L DG+ + L++ +A D+ +D R LW GEI + +A+ A RPF V T QG + A Sbjct: 121 QLRLADGTRVDLSSATALDLAYDESLRQAYLWRGEILVESAQSA--RPFLVHTAQGSVRA 178 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F+VR + T++ V HAVE+ P + + AG+ F + PL + Sbjct: 179 LGTRFSVRCEGPRTRVCVLSHAVELRPLQTPTRPMRLPAGQQALFDERRGYSSTPLREGE 238 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 SWT+ +L+ D PLGE IA L+RYR GVLRC VA LRLSG + L DA+L + ++ Sbjct: 239 GSWTQGVLTVVDWPLGEFIAELSRYRTGVLRCAAEVAELRLSGAYRLDRIDAVLQNLGKS 298 Query: 300 LPVKIQSITRYWINIS 315 LPV+++ +TRYW+ + Sbjct: 299 LPVRVRYLTRYWVTVE 314 >UniRef50_C6CDZ5 Anti-FecI sigma factor, FecR n=5 Tax=Enterobacteriaceae RepID=C6CDZ5_DICDC Length = 327 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 121/317 (38%), Positives = 170/317 (53%), Gaps = 12/317 (3%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 QAL+ A+ WYA L + ARW QW ++ AWQ VE + + + GDV Sbjct: 13 QALQQAADWYAQLLEADHDSELHARWLQWLSASDAHRQAWQYVETISQRFQPLRGDVTPL 72 Query: 71 ALH-----DTRLTRRHVMK-GLLLLLGAGGGWQLWQSETGE----GLRADYRTAKGTVSR 120 A T LTRR+ ++ G LL G+ W W+ L ADYRT G + Sbjct: 73 ASQTLLQPSTPLTRRYTLRLGALLATGSLLSWLTWRHTPVRESLLALAADYRTGTGEIRH 132 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DG+ L L+T SA DVR+ +R + L GEI + TA D L RP V +R+G + AL Sbjct: 133 VSLSDGTQLWLDTASALDVRYTDVRRQLHLIAGEILLDTAPDTL-RPLFVASREGDMQAL 191 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 G+ F++RQ + TQL V +V V A R ++AG +F A+ G P+ + Sbjct: 192 GSRFSLRQLADSTQLTVYTGSVAVTPRQA-GPLRQIDAGRQWRFDANGAGFETPMGAQDA 250 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W + +L SD PLG+V+A L RYR+G L C P VA LR+ GTFPL +TD L ++++ L Sbjct: 251 DWRQGMLHASDTPLGDVVARLARYRHGYLACAPNVAALRVVGTFPLMDTDRALAMLSRAL 310 Query: 301 PVKIQSITRYWINISPL 317 PV+I +WI + P+ Sbjct: 311 PVRIHRRFDWWITVEPV 327 >UniRef50_Q4ZTA2 FecR protein n=11 Tax=Pseudomonas RepID=Q4ZTA2_PSEU2 Length = 321 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 100/317 (31%), Positives = 156/317 (49%), Gaps = 8/317 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 + P ++ R+ +R A+ W A+L S + A Q W + ++ AWQ+ + LR + Sbjct: 2 IRPAPSNEEREVVRKAAQWLALLESGGASEEDHAMLQHWRDSSASHERAWQKAQQLRQRF 61 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLG-AGGGWQLWQSETGEGLRADYRTAKGTVS 119 G+P ++A L RR +K L + W L + E RAD +TA G Sbjct: 62 FGLPANLAMATLDRPDKARRATLKRALGAVALVPAVWLLGRQLPLEVWRADLQTAVGEHK 121 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 R L DGS L LNT SA +V A R + L GEIA+ P + G++ Sbjct: 122 RLSLADGSTLQLNTDSAVNVDMGA--RRITLVRGEIALKV---PGSAPLTIHGPYGRIVV 176 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 +E VR D+ ++ V V++ P +NA + + S G V D Sbjct: 177 GRSEVCVRLNDSDCRVSVVSGTVQLYPLRGP--VVALNAQQQVSLKQSGVGPVSAFDALL 234 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 W D+L+ ++ LG+ + L RYR G+LR +PA+ LR++G+F L NTD +L+++A + Sbjct: 235 PGWRDDVLTAQNQSLGDFLRELGRYRPGLLRWEPALENLRVTGSFRLDNTDRVLSLLAAS 294 Query: 300 LPVKIQSITRYWINISP 316 LPV +Q TRYW+ + P Sbjct: 295 LPVDVQMRTRYWVTLVP 311 >UniRef50_B0KIR0 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIR0_PSEPG Length = 315 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 123/307 (40%), Positives = 166/307 (54%), Gaps = 3/307 (0%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 R L +A+ WY L E A ++W D +Q AW+++ L+ L V +A Sbjct: 9 RNTLEAAARWYVELRCE-ADEATRAAHRRWLLSDPRHQQAWERLGRLQGTLQQVAPGIAR 67 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG-EGLRADYRTAKGTVSRQQLEDGSL 128 L+ R RR V+K L +LL AG L E G L AD T G QL+DGS Sbjct: 68 PMLNSARAKRREVLKVLSVLLMAGAAGGLALREGGVASLMADLSTGVGKRRSLQLDDGSQ 127 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ 188 L LNT +A +VR+ A R + L GEI + T DAL RPF V TRQG + ALGT FTVR Sbjct: 128 LQLNTDTAVNVRYTADIRALELLKGEILVQTVPDALSRPFIVHTRQGSVRALGTRFTVRC 187 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 +++ V +HAVEV A A V AG+ L F E GA+ P + +W +++L Sbjct: 188 DSETSRVCVLEHAVEVRSARG-AAVVRVGAGQQLAFRLEEIGALTPAAAMADAWAREMLV 246 Query: 249 FSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 D L +V++ L RYR G L CD AV+ LRLSG F L + D++L + TLPV+I+ + Sbjct: 247 VDDWRLADVVSELQRYRPGYLGCDEAVSDLRLSGAFHLSDIDSVLENLTTTLPVRIRRFS 306 Query: 309 RYWINIS 315 RYW + Sbjct: 307 RYWTRVE 313 >UniRef50_Q39ES0 Putative FecR n=1 Tax=Burkholderia sp. 383 RepID=Q39ES0_BURS3 Length = 321 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 104/320 (32%), Positives = 153/320 (47%), Gaps = 4/320 (1%) Query: 1 MNPLLTDS-RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M+ D+ + A W A L + R W + +++ AWQ++ + + Sbjct: 1 MSGRQGDALPEAVVEQAIGWLARLWSGDATDDNRRRCAAWRAEHPEHERAWQRLAGIDAK 60 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKGLLL---LLGAGGGWQLWQSETGEGLRADYRTAKG 116 LG VP D A L L + G + + + + +DY + G Sbjct: 61 LGSVPADTARGVLLAQPARPARRRAMRALGWAITLGGASYGVRSTRLWQSATSDYASGVG 120 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 V L DG+ + L+T+SA DVRFDA +R + L G + + TA D RP RV RQG Sbjct: 121 EVRDVTLADGTRVWLDTESAIDVRFDARERRIVLVRGAVHVETAHDTAGRPLRVEMRQGM 180 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ALGT FT + ++DV AVE+ A A + + AGE+++F A F +P D Sbjct: 181 ARALGTRFTASDEGMRARVDVFDGAVEIRPARAADRLLRLEAGEAVRFDADGFAPREPAD 240 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 +++WT+ L + A L RYR GVLRCDPA+A L +SG F L +TD L + Sbjct: 241 VRASAWTQGRLIAERMRVDAWCAELARYRPGVLRCDPALARLSVSGVFSLTDTDRALASL 300 Query: 297 AQTLPVKIQSITRYWINISP 316 LPV + TRYW+ + P Sbjct: 301 RTALPVDVVYRTRYWVTVVP 320 >UniRef50_Q88IB4 Transmembrane sensor, putative n=3 Tax=Pseudomonas RepID=Q88IB4_PSEPK Length = 321 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 110/312 (35%), Positives = 153/312 (49%), Gaps = 9/312 (2%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP----GDV 67 L A+ W L + Q W ++ + AWQ+ E + +P G+ Sbjct: 10 ILGEAADWLVQLQSGTATEADHRAVQAWCKRSAQHAQAWQRAEAILGDFRRLPTPVTGET 69 Query: 68 ASRALHDTRLTRRHVM-KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 R + ++RR + + L LL A W W+ + AD TA G L DG Sbjct: 70 LRRLSRNGAVSRRQALHRLGLWLLAAPAAWLAWRETPWQQWTADAHTAVGEQRTLTLADG 129 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQLTALGTEF 184 S + LNT +A D+ FDA QR + L GEI +T+AKD RP V T GQ TA GT F Sbjct: 130 SQVLLNTDTAIDITFDARQRRIDLLAGEILLTSAKDPATPARPLSVRTPHGQATARGTRF 189 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 +VR TQ+ V + AV+ A ++ AGE F PL+ +W Sbjct: 190 SVRIHGPLTQVAVLEGAVDTRPLHAD--SLLLKAGERSAFDGDRVLPASPLETGDLAWEH 247 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 +L D L +++ L RYR GVLRC PAV L++SG FPL +TDA L +++ TLPV I Sbjct: 248 GMLLARDMRLADLLQELARYRPGVLRCHPAVRELKVSGAFPLADTDASLRLLSDTLPVNI 307 Query: 305 QSITRYWINISP 316 Q +TRYW+ + P Sbjct: 308 QGMTRYWVTVEP 319 >UniRef50_D0J628 Putative FecR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J628_COMTE Length = 338 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 110/333 (33%), Positives = 159/333 (47%), Gaps = 20/333 (6%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P D A R A+ W L A +W D ++ AWQ+ E + +L Sbjct: 6 PSALDIDPSAARQAAQWLVRLHAGDADKTVHAELMRWRNSDPSHEMAWQRAELVLGKLNA 65 Query: 63 VP-----------GDVASRALHDTRLTRRHVMKGLLL--LLGAGGGWQLWQSETGEGLRA 109 G +++ AL + ++R + LL ++ G+ +W+ A Sbjct: 66 TRAGNSAEAGNTLGGLSAAALREANRSQRRAVARLLATAIVAGPIGYGVWRLAPWHAWSA 125 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 D RT G L DGS + L+T SA D+ F + +R + L G I + TA DA RPF Sbjct: 126 DMRTDTGESRESTLADGSRIQLDTGSAVDMAFTSSERRLILRAGAIWVQTAADAALRPFL 185 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQ------LDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 V T QG + ALGT FTVR F + + VQQ AVE+ + ++AG+ Q Sbjct: 186 VQTAQGTVRALGTRFTVRIAPPFARTEYSCLIAVQQGAVELSPVN-DDTSVRIDAGKQAQ 244 Query: 224 FSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGT 283 SA G + S WT +L PLG A L+RYR G++RCDPAVA L +SG Sbjct: 245 MSAGNVGVPEAAGLASDGWTHGVLYAEKTPLGIFAAELSRYRPGIVRCDPAVAALPVSGA 304 Query: 284 FPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 F L++TD L +A ++P++I +RYW+ I P Sbjct: 305 FQLRDTDQALAALAASMPIRILQRSRYWVTIVP 337 >UniRef50_UPI00016AFA6E putative FecR protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFA6E Length = 337 Score = 279 bits (715), Expect = 7e-74, Method: Composition-based stats. Identities = 110/318 (34%), Positives = 163/318 (51%), Gaps = 16/318 (5%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 ++L A++WYA+L + S + W QW + +++ AW VE + + + G+ A+ Sbjct: 19 ESLEQAANWYALLHADGGSGEHRPAWAQWLAERPEHRRAWAHVEAVSLRFEPLRGESAAE 78 Query: 71 ALHD---------TRLTRRHVMKGLLLLLGAG-GGWQLWQSETGE----GLRADYRTAKG 116 +RRHV+ L L G G GW W LR+DYRT G Sbjct: 79 RNAAAAAVHVSSTRAASRRHVLGSLAALAGTGLAGWLAWHFTPLPERIVALRSDYRTGIG 138 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 QL DG+ + LN SA DV +D +R + L GEI I TAKD RPF V T G+ Sbjct: 139 ERRDVQLADGTRVWLNANSAFDVHYDDTRRLLTLTMGEILIDTAKDRQGRPFFVDTPNGR 198 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 + ALGT FTVRQ D T L V VE+ + IV AG+ QF+A A + D Sbjct: 199 MQALGTRFTVRQSDTHTLLAVFNGRVEIR--NRAGHVEIVPAGQQRQFTAEAILAPERAD 256 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 +W++ ++ D LG +IA L RY++G + DP+VAG+R+ G FP N +L ++ Sbjct: 257 PAREAWSRGVILADDVTLGALIAELDRYQHGHIGVDPSVAGIRVVGRFPADNPGRMLAML 316 Query: 297 AQTLPVKIQSITRYWINI 314 + LP++++ +W+ I Sbjct: 317 ERDLPIRVRRTLPWWVTI 334 >UniRef50_A6SZL9 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZL9_JANMA Length = 340 Score = 279 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 9/311 (2%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + A+ WYA L + A +++W +QD + A+ ++E L + V A Sbjct: 28 DVIARAAEWYAQLHSGDSGAAELAEFERWRQQDPGHAEAYARMEKLWARFDTVSSKPAVL 87 Query: 71 ALHDT-----RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 AL+ ++ + LLL + W QS G+ + ADYRTA G +L D Sbjct: 88 ALNKALKSGAGKRKKLTAQVLLLCIAVFAAWFASQSMFGKYMLADYRTAIGEQRVIELSD 147 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 S +TLNTQSA D+ F QR V L GEI I AKD+ RPF V T G ALGT++ Sbjct: 148 QSRITLNTQSAIDIDFSGRQRRVTLQRGEIMIDVAKDST-RPFIVETAHGTARALGTQYI 206 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-ESTSWTK 244 V+++ + T++ V + +V+ A A + GE + V ++ + +W+K Sbjct: 207 VKREADATRVTVLESSVQACAAKVEA-CVTLTPGEQTTITPDAVQPVSVVNAQAAAAWSK 265 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDP-AVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 +L D+PL +V+ L RYR G + + +AGLR+SG + L +TD L V+ T P++ Sbjct: 266 HMLVVDDQPLAQVLTELARYRYGRIVFNADEIAGLRVSGVYALDDTDRTLEVLLATTPIR 325 Query: 304 IQSITRYWINI 314 I+ T I + Sbjct: 326 IKRYTPLLIVV 336 >UniRef50_C1DFE7 Anti-sigma factor, FecR family n=2 Tax=Pseudomonadaceae RepID=C1DFE7_AZOVD Length = 317 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 133/317 (41%), Positives = 182/317 (57%), Gaps = 7/317 (2%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + +D +R ALR A+ W+AVL + V + A W+ W Q +NQWAWQ++E L+ QL + Sbjct: 1 MPSDRQRDALRMAARWHAVLCSDEVREEDRAAWRAWRAQAPENQWAWQRMELLQRQLQDL 60 Query: 64 PGDVASRALHD-TRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQ 121 PG++A + + + RL RR ++KG++L GA GW Q + AD R+A G R Sbjct: 61 PGNLAFQTMSEEPRLGRRTLLKGVILAGGAATLGWTARQGLPWQEWLADQRSAIGERRRL 120 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK--DALQRPFRVLTRQGQLTA 179 LEDGS L LNT SA DVRFD +R + L GEI + TA+ +RPF V T G + A Sbjct: 121 TLEDGSRLVLNTDSAVDVRFDGQRRLIELHRGEILVETARSLGGDERPFVVSTHDGLIRA 180 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F VRQ F+++ V +HAV V +A + IV AG++L F A + D + Sbjct: 181 LGTRFIVRQHRTFSEVTVLEHAVAVS--NAAPGETIVQAGQALAFDAGR-NLPRRFDPLA 237 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 W L D L +++ L RYR G L DPAVA LRLSG +PL +TD L I Sbjct: 238 AEWANGRLVIDDWRLADLLDELARYRPGFLSADPAVADLRLSGAYPLDDTDRALAAIVHA 297 Query: 300 LPVKIQSITRYWINISP 316 LPV++ S TRYW+ + P Sbjct: 298 LPVRLSSHTRYWVRLLP 314 >UniRef50_A5VYE0 Anti-FecI sigma factor, FecR n=4 Tax=Pseudomonas putida RepID=A5VYE0_PSEP1 Length = 318 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 112/318 (35%), Positives = 176/318 (55%), Gaps = 8/318 (2%) Query: 3 PLLTDSRRQA-LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 P+ + QA + A W L + SP+ E ++Q W N+ AWQ+V +L ++L Sbjct: 2 PMPDGTPAQAQVDQAIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAWQRVSHLGDELA 61 Query: 62 GVPGDVASRAL---HDTRLTRRHVMKGL-LLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 G+P D++ R L + +RR +K L LL +G GW + L AD TA G Sbjct: 62 GLPKDLSRRTLDASQHPKASRRDHLKLLGLLAVGGSLGWAAREPLGLPQLLADTSTATGE 121 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 + Q DGS + LNT SA D+ + A QR ++L +GE+++ + + RPF V T G L Sbjct: 122 RRQWQGSDGSRIQLNTASAIDLHYSAEQRQLKLIHGEVSLDSNPN-DNRPFHVATPVGPL 180 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 T + +R+ L V++ V + ASA A++ + GE+LQ SA+ + L + Sbjct: 181 TTFDGQLLLRENSQGLLLSVRRGEVTLFPASASARQVL--PGETLQVSANGSIQARTLHN 238 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + WT+ +LS PL E ++ L RYR G+LRC P VAGL++SGT+ L +T IL ++ Sbjct: 239 DPWGWTEGVLSVQQMPLAEFVSELGRYRPGLLRCAPEVAGLKVSGTYQLDDTGQILQLLT 298 Query: 298 QTLPVKIQSITRYWINIS 315 ++LPV+++ TRYW++I Sbjct: 299 RSLPVRVEYRTRYWVSIG 316 >UniRef50_B0KNB6 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KNB6_PSEPG Length = 314 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 112/311 (36%), Positives = 158/311 (50%), Gaps = 1/311 (0%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 ++ Q + A W L+ ++ Q+W ++ AWQ++ +LG +P Sbjct: 4 SEPTEQVVAQAIGWRVRLASGLAQVEELEACQRWRGLHPSHEQAWQRLAVFDGRLGAMPP 63 Query: 66 DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 AS+AL R R + LLL G+ G A RTA G R QL D Sbjct: 64 PQASQALRY-RDRRTVLKGLALLLGGSAVVGSASLGMRGSPWLAGQRTAMGERRRLQLPD 122 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 G L +N+ SA D+ FD+ QR + L GE+ I T K +RPF V T G L ALGT F+ Sbjct: 123 GGWLQMNSGSALDLAFDSQQRRINLLAGEVMIQTGKQGAERPFWVETPLGTLQALGTGFS 182 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VR D L V++ AV V + ++ AGE ++F+ A +PLD ++ +W Sbjct: 183 VRLNDESALLAVEEGAVAVRPGTLLQSAAVIRAGEQVRFNRQRVFATQPLDRDALAWRDG 242 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 L PL + A L RYRNGVLRCDPAVA L +SG FPL D L + +TLPV+ + Sbjct: 243 YLVVRQWPLARLCAELGRYRNGVLRCDPAVADLLISGVFPLDEPDRALAALGRTLPVRTR 302 Query: 306 SITRYWINISP 316 +TR+W+ + P Sbjct: 303 YLTRWWVTLEP 313 >UniRef50_A6T3S7 Fe2+-dicitrate sensor, membrane component n=4 Tax=cellular organisms RepID=A6T3S7_JANMA Length = 330 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 106/320 (33%), Positives = 159/320 (49%), Gaps = 9/320 (2%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 P D R L A+ W LS + ++W + ++ AW + + L N+LG Sbjct: 12 RPEAIDPR--ILDEAAEWLMQLSAG-ARAEDHRACERWSQSSPEHARAWARAQLLLNKLG 68 Query: 62 GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGG--GWQLWQSETGEGLRADYRTAKGTVS 119 +P +A L+ R L + A W +W + ADY TA G Sbjct: 69 ALPPSLAMPTLNRAPDAGRRAALTRLAAILALAPASWGIWSVFQAQDWMADYCTAVGEQR 128 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQL 177 L D + LTLNT +A DVRF + QR VRL GEI + TA +A RPF V T QG++ Sbjct: 129 VIHLADNTELTLNTATAVDVRFSSTQRNVRLRSGEILVQTAHEAAAVYRPFSVNTIQGRM 188 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLL-ASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ALGT F+VR + T L V + AV + + ++++ AG+ + F+ + V D Sbjct: 189 EALGTRFSVRMDGDTTHLAVLEGAVRITPDRTGTGAQQVLRAGQQVSFTDNVIADVAGAD 248 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 D +W + +L L + A L+RYR+G++R DPAVAG+R+SG +P+ +TD L ++ Sbjct: 249 DAVIAWARGMLVADKMRLADFAAELSRYRSGIVRVDPAVAGVRVSGAYPVGDTDKALAML 308 Query: 297 AQTLPVKIQSITRY-WINIS 315 T PV + R WI + Sbjct: 309 VSTYPVDAVTRMRGRWITLV 328 >UniRef50_A9BWH6 Anti-FecI sigma factor, FecR n=2 Tax=cellular organisms RepID=A9BWH6_DELAS Length = 323 Score = 276 bits (707), Expect = 6e-73, Method: Composition-based stats. Identities = 117/316 (37%), Positives = 167/316 (52%), Gaps = 3/316 (0%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 L + R+AL A+ W+ L G + + WQ+W++ D +Q AW +V+++ QL Sbjct: 3 ERHLEGNDRRALHEAAAWHVKLRGASATEGLQQDWQKWHDADPAHQRAWLRVQSVTAQLS 62 Query: 62 GVPGDVASRAL-HDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVS 119 +P +A +AL TRR V++GL L LG+G W W+ E +A RTA G Sbjct: 63 HLPAPLARQALGRRASPTRRSVVRGLALGLGSGATAWMAWKGAPLESWQAGQRTATGERR 122 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 +L DGSL+ L+T +A D FD QR +RL G I + T DAL RPF V T QG + A Sbjct: 123 DLKLPDGSLVALDTATALDTVFDDRQRVLRLHRGRILVATEPDALGRPFSVQTPQGHVLA 182 Query: 180 LGTEFTVR-QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 LGT FTV D + V + AV + A + AG+ FS+S D Sbjct: 183 LGTRFTVHLADDGLCHVTVLEKAVRLQPLDGDAPSAQLQAGQQAAFSSSATQPPTSADPF 242 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 + SW + L D PLG++I L RYR G L C VAG+ +SG FP+ +TD L + Sbjct: 243 AASWHEGGLVALDMPLGQLIDALARYRPGYLGCSAEVAGMLVSGAFPVDDTDRALAALVS 302 Query: 299 TLPVKIQSITRYWINI 314 P++++S TRYW+ + Sbjct: 303 RFPLQLRSRTRYWVEV 318 >UniRef50_A9BW91 Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BW91_DELAS Length = 336 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 156/319 (48%), Gaps = 14/319 (4%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 R+ A+ W+ +L S ++ W + ++ AW + + + G +P + Sbjct: 13 SREIALQAAEWFVLLHSGEASEADHRAFEAWRARADVHEQAWLRALAVSQRAGSLPPTLG 72 Query: 69 SRALHDTRLT-----RRHVMKGLLLLL-GAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 + AL + RR ++ L LL+ A GW W++ + + TA G Sbjct: 73 APALARKQRRLGAVGRRDTVRALALLITAAPVGWLAWRAAPWMQWTSTHATATGERREWT 132 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQLTAL 180 L DGS + L+T SA DV FD R V L G + I TA D RPF V T QG++ AL Sbjct: 133 LADGSRIVLDTGSAVDVLFDEALRRVHLSEGAVFIETAPDPQSRHRPFVVTTGQGRVRAL 192 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F VR +++ V Q AV++ AQ+ L F A G +P D + Sbjct: 193 GTRFVVRSVRERSEVAVLQGAVQITTRGGAAQQLQAGQ--QLWFDAMGMGRAEPADAGAA 250 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN----TDAILNVI 296 W + +LS + L + +A L+RYR+G L CDP+VA LR++G F L + TDA+L + Sbjct: 251 QWARGLLSADNMRLADFVAELSRYRSGWLHCDPSVADLRVTGAFQLGDADTGTDAVLANL 310 Query: 297 AQTLPVKIQSITRYWINIS 315 LPV++ TRYW+ ++ Sbjct: 311 VHLLPVQVHYRTRYWVTVA 329 >UniRef50_A1BCE6 Putative FecR n=2 Tax=Proteobacteria RepID=A1BCE6_PARDP Length = 318 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 100/314 (31%), Positives = 152/314 (48%), Gaps = 7/314 (2%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 R + L A+ W + A +++W Q + AWQ+ + + VP + Sbjct: 5 PRAELLEEAADWAMAMRYGAPGEVDGAAFERWLAQSPQHAAAWQRAQAVFQTFERVPRGL 64 Query: 68 ASRALHD--TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 L RR + L L + + + AD TA G L D Sbjct: 65 GKDVLRAMEPLPGRRRALGVLGGALLVPSAGVMAWQQPWQKWGADVATAVGERRALALPD 124 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTE 183 S L LNT SAAD+ F +R + L GEI +TT D RP V T G++ ALGT Sbjct: 125 ASQLVLNTDSAADIAFTTAERRIHLRAGEILLTTHPDPAPVPRPLLVETAFGEVRALGTR 184 Query: 184 FTVRQ-QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 F+VRQ + ++ V +HAVE+ +A +++ GE F ++ +D+ + W Sbjct: 185 FSVRQLDGDLVRVSVFRHAVEIRPRNA--APHVLHQGEQADFDSNGVRPPATVDESAAIW 242 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + +L D LG+VIA + R+R GVLRCDPAVA + +SG L +TD L ++ +TLPV Sbjct: 243 EQGMLLAQDMRLGDVIAEMARHRRGVLRCDPAVAAILVSGAISLSDTDGGLALLERTLPV 302 Query: 303 KIQSITRYWINISP 316 +IQ T +W+ ++P Sbjct: 303 RIQRRTPWWVVVAP 316 >UniRef50_A4VS46 Probable transmembrane sensor n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VS46_PSEU5 Length = 320 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 103/312 (33%), Positives = 159/312 (50%), Gaps = 8/312 (2%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + L+ A+ W+A+L VS + W W EQ ++ AW +VE + Q + D R Sbjct: 6 RVLQQAAEWFALLQSGSVSASERRAWAAWLEQ-PEHAQAWAKVERISGQFQPLTSDAIGR 64 Query: 71 A----LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 A L + TRR +K L +L G + + AD RTA G V +L DG Sbjct: 65 AAGAMLQQRQSTRRQALKVLSVLCGGAVLTVAGGALPWQRWAADERTAVGEVRDLRLADG 124 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA-LGTEFT 185 + L LNT SA D+RFDA +R + L +GE+ I RP + +R+G + + F+ Sbjct: 125 TRLWLNTDSALDIRFDAKERRLALRHGELLIDAPASRRGRPLVLSSREGHVRSEQAARFS 184 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 +RQ++ T+L V V++ L V AG+ F G + E +W Sbjct: 185 LRQEEGRTRLSVFAGVVDIQLEGFGVTS--VPAGQQAAFDRRHVGPLAAARAEHQAWATG 242 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 +L ++ L + +A L+RYR+G L CDP +A LR+ G FPL +TD +L +A TLPV+I+ Sbjct: 243 VLLADNQRLEDFLAELSRYRHGYLGCDPRIADLRVVGAFPLADTDRVLQALAATLPVRIE 302 Query: 306 SITRYWINISPL 317 +W+++ PL Sbjct: 303 RRMAWWVSLEPL 314 >UniRef50_Q1LER3 Putative FecR n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LER3_RALME Length = 328 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 103/325 (31%), Positives = 156/325 (48%), Gaps = 10/325 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ D + + +A W L S + R+ W D ++ AWQ++++LR+ Sbjct: 1 MSSSQADLPSEVIDAAIDWAIRLLFNEPSDEMRQRFLVWEGADPRHRLAWQRIQSLRDGF 60 Query: 61 GGVPGDVASRALHDT--------RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYR 112 VP +A L + R+ + L + A G ++ AD Sbjct: 61 PRVPATLAVETLRNAETIRGRRQAGRRQAIKLLALGGVSAFGLSMAYRESPWRSWAADVH 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA-LQRPFRVL 171 T G R LEDG+++ LNT++A D+RFD R V L GEI +TT D RPFRV Sbjct: 121 TGVGEQRRLALEDGTVVVLNTETALDIRFDGQHRDVLLRRGEILVTTGHDGDAARPFRVQ 180 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T G + ALGT F VR + + + VQQ AV + AP+Q + G + + Sbjct: 181 TPFGAMRALGTRFAVRLEADRACVSVQQGAVALHDGKAPSQ-AVATPGTTWTMTQDTSAL 239 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 SW +LS S+ L +V+A L RYR+G + CDPAVA L +SG + + +TD Sbjct: 240 SDAAALSPDSWANGLLSGSNMRLADVLAELARYRHGRIDCDPAVADLVISGAYRIDDTDR 299 Query: 292 ILNVIAQTLPVKIQSITRYWINISP 316 L + + LP+++ TRYW+ + P Sbjct: 300 TLRFLEKALPIRVSYFTRYWVRVGP 324 >UniRef50_C9NLK7 Transmembrane sensor n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NLK7_9VIBR Length = 314 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 100/314 (31%), Positives = 168/314 (53%), Gaps = 7/314 (2%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + R+++ AS W A + + V+ Q + + W + DN +AW+Q+E+L+ + +P Sbjct: 1 MERVSRKSIEQASLWMARMWSDDVTEQDKRAFHLWRTRHPDNDYAWRQMESLQQKFTSLP 60 Query: 65 GDVASRALHDT---RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 + + T R++RR V+ + L A L +Y +A G V Sbjct: 61 DPQSGSKVLGTYRQRVSRRQVLIWGGVSL-ATMSLVLSSDAAMPQGETEYASATGEVKPI 119 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 +L DG+++ LNT S V F+ HQR +RL GEI +TT PF V+T QG +T +G Sbjct: 120 KLSDGTVVVLNTASRMRVDFNQHQRVIRLMEGEIMVTTGHHLT--PFHVITPQGSVTPIG 177 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTS 241 T+F+VR + T++ V + V + + AQ + + AGE +FSA G + L Sbjct: 178 TKFSVRLEPEQTRVSVFEGEV-IAKSQRQAQGQHLLAGEKSEFSAYHQGRKQSLLATDAL 236 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 W ++ + D PL E IA L+RYR GV++ P ++ LR+SG + +++TD L + Q LP Sbjct: 237 WLEEKILAHDTPLPEFIAELSRYRRGVIKVSPELSALRISGVYSIRDTDQTLENLRQILP 296 Query: 302 VKIQSITRYWINIS 315 +++ TR+W++I+ Sbjct: 297 IEVHFRTRFWVSIA 310 >UniRef50_Q88Q30 Transmembrane sensor, putative n=1 Tax=Pseudomonas putida KT2440 RepID=Q88Q30_PSEPK Length = 321 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 110/326 (33%), Positives = 164/326 (50%), Gaps = 14/326 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ D L++A+ W+A L +A+W W +D ++ AW VEN+ + Sbjct: 1 MSRAPLD--HAVLQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVENINQRF 58 Query: 61 GGVPGDVASR-----ALHDTRLTRRHVMKGLLLLLGAG----GGWQLWQSETGEGLRADY 111 GG+ G ++ R +RR V+ L + AG GGWQ ++ A Y Sbjct: 59 GGLSGQAEQARQVFDSVRRDRHSRRAVLGSLCVAGVAGVLGWGGWQRGWVDSPRAWFATY 118 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT G V L DGS L LN +A DV+FD R +RL+ GEI I + KD RP V+ Sbjct: 119 RTGLGEVRPVTLADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGKDP--RPLSVV 176 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 TR G++ LGT F+VR Q T L V AV+ S ++ + AG+ + F A + GA Sbjct: 177 TRAGRVQPLGTRFSVRDQGLQTTLSVFAGAVQATC-SGSGRQTTLQAGQMMVFDAQQVGA 235 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 W++ +L D PL ++I L YR+G L DPA+ LR GTFPL +TD Sbjct: 236 PSTAQRLREDWSRGVLVAEDMPLVQMIDILRDYRHGHLGIDPAIGSLRAVGTFPLLDTDR 295 Query: 292 ILNVIAQTLPVKIQSITRYWINISPL 317 L ++ + LP+++ +W++I + Sbjct: 296 ALAMLERALPIRVVRTLPWWVSIEAV 321 >UniRef50_A1K836 Putative transmembrane sensor n=1 Tax=Azoarcus sp. BH72 RepID=A1K836_AZOSB Length = 328 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 158/306 (51%), Gaps = 5/306 (1%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 AL A+ W+ +L+ + RW W ++ AWQ+VE+L + VP Sbjct: 15 VPAAALEQAAEWFVLLASGEADAEDHRRWLAWRAGCPSHEAAWQRVESLSGRFREVPPPF 74 Query: 68 ASRALHDTRLT--RRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLE 124 AS A+ RR +K L +LL G G W + +S G A TA G L Sbjct: 75 ASVAIVGPSRGAGRRRALKQLAVLLATGAGAWGVQRSYQGMVWSASATTAIGEQRDWVLA 134 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALGT 182 DGS LTL+T SA V F QR +RL G + + TA D R V T QG++ ALGT Sbjct: 135 DGSRLTLDTDSALAVDFGLGQRLIRLQRGRVLVETAPDPAPIARSIAVETAQGRVIALGT 194 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 F+VRQ+ +Q+ V + V++ A I+ AG++++F+ + F +PL T+W Sbjct: 195 RFSVRQEAGTSQVVVLEARVDIRPADNANAGTILAAGDAVRFTRAGFKDRQPLGLHDTAW 254 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 K +L + L ++ A L+RYR L CDP +A LR+SG FPL+++DA L + +LPV Sbjct: 255 AKGLLMADNWSLLDLAAELSRYRRQPLSCDPRIAALRISGVFPLRDSDAALAAVTDSLPV 314 Query: 303 KIQSIT 308 +++ Sbjct: 315 RVERRA 320 >UniRef50_A9BUB2 Anti-FecI sigma factor, FecR n=5 Tax=Proteobacteria RepID=A9BUB2_DELAS Length = 356 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 107/316 (33%), Positives = 161/316 (50%), Gaps = 12/316 (3%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV-PGDVASR 70 R+A+ W+A+L + S ARWQ+W ++D D+ AW ++ + L G+ PG R Sbjct: 37 VARAAAGWFALLQSGQASAADRARWQRWLDEDADHGRAWAHLQAVTGALTGLNPGGAGYR 96 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGGG--WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 L R + GL LG G W ++ + + ADY + R L DG+ Sbjct: 97 GLSAAPRAARRRLLGLFAGLGTAAGAGWLASRTPQWQQMAADYASGT-QRRRWTLPDGTD 155 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL---QRPFRVLTRQGQLTALGTEFT 185 + L SA ++FD +R +RL GE TT A PF V T G++ ALGT F Sbjct: 156 MLLGPGSAVALQFDGSERRLRLMAGEALFTTGHPAGTLGDLPFVVETAHGRVRALGTRFM 215 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VR ++ V + AVE+ A A R + AGE++ F+ + + V+P +W++ Sbjct: 216 VRSSHAGARVAVFERAVELRPAGTGASARRLQAGEAMDFTRTGWSTVQPAGPADDAWSRG 275 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN-----TDAILNVIAQTL 300 L ++ L + +A L RYR G L DPAVAGLR SG FPL TDA+L ++ L Sbjct: 276 QLWVDNQRLDDFLAELNRYRPGWLHADPAVAGLRFSGVFPLDEGGIDGTDAVLAMLPGAL 335 Query: 301 PVKIQSITRYWINISP 316 PV+++ TR+W+ + P Sbjct: 336 PVQLRWRTRWWVVVEP 351 >UniRef50_Q887T2 Regulatory protein, putative n=4 Tax=Pseudomonas RepID=Q887T2_PSESM Length = 320 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 107/318 (33%), Positives = 156/318 (49%), Gaps = 14/318 (4%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + + + A+ W A+L E VS +++W + D +Q A ++++L + Sbjct: 6 EPSERMITEAASWLALLQDEPVSAADRHAFERWRKADPGHQLALSRMQSLWGSFDELSDT 65 Query: 67 VASRALHDT------RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 A AL T + T R V L L+ GW + AD T G S Sbjct: 66 PARIALRQTFAPAGSKPTSRTVQA-LALVGVLVCGWMSVERLPV--WMADRHTDVGERSE 122 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS + LN+ SA DV+FD QR + L GE+ + AKD +QRPF V T QG +TAL Sbjct: 123 FSLADGSQVQLNSGSALDVKFDGRQRVIELLQGELWVEVAKD-VQRPFVVRTDQGTITAL 181 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL-DDES 239 GT F VR+ + T + V + A + + A V G+ L D+ Sbjct: 182 GTRFVVRRGEEGTTVSVLESA--IAAQANTADVINVATGQQALLKDGRVQTPHALGSDDP 239 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVIAQ 298 WT+ +L D+PL EV+ TL YR+G+LR D A+AGLR+SG F L +TDA L +A Sbjct: 240 ADWTRGVLKVDDQPLSEVLQTLATYRHGLLRYDTQALAGLRVSGVFRLDDTDAALATLAD 299 Query: 299 TLPVKIQSITRYWINISP 316 LP+K++ T + + P Sbjct: 300 NLPIKVERFTDLLVIVKP 317 >UniRef50_B7X231 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X231_COMTE Length = 326 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 10/325 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + + ++ A W L G S + W E ++ AW++++ ++++ Sbjct: 1 MSAAPNEPSPEVVQKAIAWLVRLQGGSASAAVWDECRLWREAAPEHALAWERLQGIQSRF 60 Query: 61 GGVPGDVASRALH-----DTRLTRRHVMKGLLLLLGAGGGWQLW-QSETGEGLRADYRTA 114 +P A+ A + RR M + + +G G + + L AD RT Sbjct: 61 AAMPAVPAALAQQTLNGASKHMGRRKAMGLMAIAMGTGCSVLIANRHWRDSALLADLRTG 120 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVL 171 G V R L DGS++ ++T +A ++RFD +R + L G IA+T+ D+ RP V Sbjct: 121 VGEVRRMVLADGSVMLMDTSTAVNLRFDEGERRLVLIKGRIALTSGSDSEAQRYRPLFVQ 180 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T GQ+ ALGT F + +++ TQ+ V AVE+ A +Q +++ GE F AS Sbjct: 181 TPHGQVRALGTRFQTQVREDGTQVQVLSDAVELRP-QATSQVQLLRQGEQAWFDASGVHE 239 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 +K D + +WT +L PL ++A L RYR G L CD VA L +SG F L++T+ Sbjct: 240 LKAGDGDGDAWTDGLLVARSMPLSVLVAQLGRYRAGYLACDERVAQLPISGVFSLRDTER 299 Query: 292 ILNVIAQTLPVKIQSITRYWINISP 316 L+++ +T P++++ TRYW+ + P Sbjct: 300 SLDLLQKTWPLELRRRTRYWVTLVP 324 >UniRef50_A6VD04 Probable transmembrane sensor n=6 Tax=Pseudomonas RepID=A6VD04_PSEA7 Length = 340 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 108/314 (34%), Positives = 171/314 (54%), Gaps = 7/314 (2%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P Q L A+ W ++ ++P Q+A + W + ++Q AW++ E L +G Sbjct: 21 PAAEAIAPQVLGEAASWLLLMQEGPLAPAQQAELESWRLRSAEHQRAWRRAERLLANIGS 80 Query: 63 VPGDVASRALHDTR-LTRRHVMKGLLLLLG-AGGGWQLWQSETG-EGLRADYRTAKGTVS 119 +P +A R L RR V++GL L +G A W W+++ +G AD+ TA G Sbjct: 81 LPPALARRTLERPGGSGRRAVLRGLALFIGGAPLAWWGWRAQFWRDGFGADHLTAVGERR 140 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQL 177 LEDGS + +NT SA D+R+DA QR +RL+ GEI + TA D + RPF V T QG + Sbjct: 141 HLTLEDGSQVEMNTDSALDLRYDAGQRLLRLYRGEIYLRTAADRREPPRPFLVRTEQGLM 200 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP--AQKRIVNAGESLQFSASEFGAVKPL 235 ALGT F+VR++ T L V + AV+V A A R++ AG+ ++F GAV+ Sbjct: 201 RALGTAFSVRREGTETVLAVYEGAVQVRPEDAASAADGRVIEAGQRVRFDRQRIGAVESA 260 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + + +W + +L + PL + L RY + + C+P++ LR+SGTFP+ + L + Sbjct: 261 GEAALAWRQGLLVADEMPLRQWAGELMRYGSESIECEPSLGPLRVSGTFPVDDLPLALAM 320 Query: 296 IAQTLPVKIQSITR 309 +AQT +++ R Sbjct: 321 LAQTHGLRLVHQGR 334 >UniRef50_Q4ZM65 FecR protein n=23 Tax=Pseudomonas RepID=Q4ZM65_PSEU2 Length = 327 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 11/312 (3%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + L +A W + + + +W D+++ AW Q+ + + +P A + Sbjct: 9 RVLNAAIEWQLNMDSNGGNDAE---LARWLAADEEHARAWSQLGMVNQRF-ALPAGPARK 64 Query: 71 ALHDTRLTRRHVMK---GLLLLLGAGGGWQLW---QSETGEGLRADYRTAKGTVSRQQLE 124 AL + RH ++ G L + G L+ + + AD RTA G +L Sbjct: 65 ALQQSPGALRHRLRKLGGGLAGVFMALGLALFVGDRYLPIDYWLADQRTATGEQRDVRLA 124 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 D +L+ LNT SA DVRFDA QR V L GEI + T RPF V T G++ ALGT F Sbjct: 125 DNTLIRLNTHSAIDVRFDAQQRRVILQDGEILVQTGDHDDPRPFIVETADGKMRALGTRF 184 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 VR++ + T L V Q AV +A ++ ++ G+ + + + G + + +WT+ Sbjct: 185 LVRRESDGTLLSVLQSAVVAHPRNASGEQ-VLREGQQVLLTRNGLGPLLGMPSGVDAWTR 243 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 +L + L +++A L RYR G L DP VA LR++GTFPL +TD L + TLPV+I Sbjct: 244 GMLVVDNARLADMLAELGRYRTGHLGVDPKVADLRVTGTFPLTDTDLALKALLPTLPVQI 303 Query: 305 QSITRYWINISP 316 + T +W+++ P Sbjct: 304 EQNTAWWVSVLP 315 >UniRef50_Q48ML1 Sigma factor regulatory protein, FecR/PupR family n=13 Tax=Pseudomonas RepID=Q48ML1_PSE14 Length = 325 Score = 267 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 108/323 (33%), Positives = 166/323 (51%), Gaps = 11/323 (3%) Query: 1 MNPL-----LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVEN 55 MNP +D + A W + + +++ WQ W + ++Q AW ++ Sbjct: 1 MNPNNESLNKSDISLGVAQQAVGWLLEMQEGTLDARRQQAWQLWLNGNAEHQRAWAHMQR 60 Query: 56 LRNQLGGVPGDVASRALHDTR-LTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRT 113 + +L G+ +A AL+ + +RRH +K LLLL W L + + L ADY + Sbjct: 61 VNQRLSGLSSPLAHAALNAPKSASRRHALKLLLLLGAGSAAGWSLREQIALQPLLADYNS 120 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 G + L DGS + LNT SA DVRFDA QR ++L GEI I+ + D RP +L+ Sbjct: 121 GVGEQRKVALSDGSQVQLNTASAVDVRFDAQQRLIKLLQGEILISASAD--SRPLSLLST 178 Query: 174 QGQLTAL--GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 +G + A + F +RQ D TQL V A+E+ ++ A + FS + + Sbjct: 179 EGTVRASTGASRFNLRQLDGRTQLAVFAGALEIAPLGRSGPGLMLRASQQATFSRDAWDS 238 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 VKP+D S +W +L S L + +A L RYR G L CD VA L +SG +PL +++ Sbjct: 239 VKPIDAGSGAWADGMLVASRMKLSDFLAELGRYRRGRLNCDAKVANLLISGNYPLADSER 298 Query: 292 ILNVIAQTLPVKIQSITRYWINI 314 IL+++ LPV +Q T YW+N+ Sbjct: 299 ILDMLELALPVHVQRFTWYWVNV 321 >UniRef50_A6SZM2 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZM2_JANMA Length = 329 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 108/319 (33%), Positives = 159/319 (49%), Gaps = 12/319 (3%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P +TD + +A W L P Q ++QW QD + A + +E + Sbjct: 11 PAVTDP---IVEAAIDWIICLRSGDAGPVQYEAFKQWRLQDVRHDTAIRHLEQVLGTFDS 67 Query: 63 VPGDV-----ASRALHDTRLTRRHVMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKG 116 +P A RAL + R+ + L LL +G+G G + + AD RT+ G Sbjct: 68 LPASSHVRSSARRALLKSPDRRKLLRNTLALLLVGSGTGLLAQRITPLNTVTADLRTSTG 127 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 L DGS + LN +SAAD+ FD R + L GEI + A DA QRPF V + +G Sbjct: 128 QRKHMHLADGSQIWLNARSAADIDFDESTRRIHLRSGEIVVDVAADA-QRPFIVESAEGS 186 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 + ALGT F VRQ++ T L V +V + + R + AGE+ +F S+ + Sbjct: 187 MRALGTRFLVRQEEGATVLAVLHSSVRI--DAKDGASRTLVAGETARFDQSQITVIDTAS 244 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + +W + D+PL EVIA + YR+G LR P LR++GTFPL ++ L + Sbjct: 245 GAAAAWVDGFIEVHDRPLSEVIAAMRPYRSGFLRVTPQAGALRVTGTFPLDDSKRTLAAL 304 Query: 297 AQTLPVKIQSITRYWINIS 315 A+TLP+ I+S T YWI+I Sbjct: 305 AETLPIVIRSRTDYWISIE 323 >UniRef50_Q4KKG0 Sigma factor regulatory protein, FecR/PupR family n=11 Tax=Pseudomonas RepID=Q4KKG0_PSEF5 Length = 334 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 106/325 (32%), Positives = 162/325 (49%), Gaps = 10/325 (3%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL-- 60 PL + ++ A +W L +P+ + + W Q+++ AWQ+V++L+ +L Sbjct: 9 PLKPNPDHLVVKQAINWLLRLRNNGANPKLQQQCDLWRAAHQEHELAWQRVQSLQQELTD 68 Query: 61 --GGVPG-DVASRALHDT--RLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTA 114 VPG VA L + RL RR +K L L G W + AD+ TA Sbjct: 69 NLRSVPGAQVALHTLEHSSQRLGRRQALKLLSGALLLGSSAWVGKDLLGWQQWNADFATA 128 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD-ALQRPFRVLTR 173 G QL DG+ L LNT SAAD+ F+A QR ++L GEI ++ D RP V +R Sbjct: 129 VGEQRGFQLPDGTRLELNTDSAADLNFNAEQRLIKLRRGEIMVSCGADHGPARPLLVESR 188 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEV-LLASAPAQKRIVNAGESLQFSASEFGAV 232 L F VR +D T+L V +V + +A + V AG+S Q S Sbjct: 189 HALLEGFDARFVVRVEDRCTRLSVTHGSVAIHAPHTADGRSARVEAGQSYQISHGLAEPA 248 Query: 233 KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAI 292 PL + +W ++ + L + + + RYR+G L C AV LRLSG F L++TD + Sbjct: 249 APLAMDVGAWADGLIVTRNMRLDDFLQEVGRYRHGYLGCSAAVGNLRLSGVFRLEDTDKL 308 Query: 293 LNVIAQTLPVKIQSITRYWINISPL 317 L ++ QTLPV+++ TR+W+ + P+ Sbjct: 309 LAILPQTLPVQLRYRTRWWVTLGPV 333 >UniRef50_B7WXN1 Anti-FecI sigma factor, FecR n=2 Tax=Comamonas testosteroni RepID=B7WXN1_COMTE Length = 317 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 109/314 (34%), Positives = 162/314 (51%), Gaps = 7/314 (2%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 L A+ W L+ E ++ + A +++W +++ AW + E L +LGG+P +A Sbjct: 2 EAHLLDEAADWLVRLNDEGLTAAEHAAFERWRHTSAEHEGAWMRAERLMGKLGGLPTALA 61 Query: 69 SRALHDTRLTRRHVMKGLLLLLGA--GGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 L ++ R L +L A GGW W+ +G AD RT G L DG Sbjct: 62 MPTLDRSQRRSRRAAVARLAVLLAAVPGGWMSWRMAQQQGWTADLRTVTGEQRSVTLADG 121 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALGTEF 184 S L L+T SA D+RFDAHQR + L G I + TA D RP V T G+L ALGT F Sbjct: 122 SRLLLDTASAVDIRFDAHQRLIHLRRGSILLETAADPSGVDRPLLVATAVGRLRALGTRF 181 Query: 185 TVRQQDNF--TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 +V+Q L V Q AVEV +A ++V AG + +A GA++ + +W Sbjct: 182 SVQQDSEGQFVDLAVTQGAVEVTPHAASRPAQVVPAGNWARLTAQGAGALQTASAQQLAW 241 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + +L P+ EV A L RYR+G+L C P V +++SG +PL +TD L ++A+T V Sbjct: 242 AQGMLVADAMPMAEVCARLARYRSGLLHCAPEVMAIKVSGAYPLADTDRALAMLAETYAV 301 Query: 303 KIQSITR-YWINIS 315 + R YW+ ++ Sbjct: 302 SVHQRWRGYWVTVA 315 >UniRef50_A6W3B6 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B6_MARMS Length = 313 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 12/319 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M P D R ++ A+H A L + S + +W D DN+ AWQ + + Sbjct: 1 MQPNQIDLER--IQQAAHLMARLWSDEPSKHDQHACNKWRAADPDNEKAWQCLIQAQAHF 58 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLL----LLGAGGGWQLWQSETGEGLRADYRTAKG 116 G P + +++RRHV+ + L L AGG + + TA G Sbjct: 59 GDAPKETIQIIARSRKMSRRHVLSLMGLSAGGLFFAGGYIHNRSISSHASYYKNLATATG 118 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 V L D + L +NT++ + + +L GE + + P+++ T G Sbjct: 119 EVRSFPLSDINKLVMNTKTTLAM---PTEHQFKLDDGEFFLDVS---QATPYQIETMDGI 172 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ++ + +R+ D+ T++ V LL ++ GES+ F+ + D Sbjct: 173 ISFNQGKLNIRRTDDITRISVFSGQSVQLLGKQMHNPLSISPGESVSFNTINTSRISSTD 232 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + W L PL + I L+RYR G++R P + L ++G F + NTD IL + Sbjct: 233 PNTIGWVTGKLVAQRMPLTDFIHELSRYRKGIVRVAPELRQLAVTGVFSIDNTDQILQQL 292 Query: 297 AQTLPVKIQSITRYWINIS 315 +LP+ I +T YW+N++ Sbjct: 293 QASLPINIYQLTPYWVNVT 311 >UniRef50_A6W1Y1 Anti-FecI sigma factor, FecR n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W1Y1_MARMS Length = 328 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 154/316 (48%), Gaps = 14/316 (4%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L +A+ W+AVL+ + VS + WQQW +D+ ++ AWQQVE++ D + ++ Sbjct: 12 LEAAAEWFAVLADKPVSEASQLAWQQWLNEDEAHRKAWQQVESVGAMFSSFQDDKSQQSA 71 Query: 73 -----HDTRLTRRHVMKGLLLLLG-AGGGWQLWQSET----GEGLRADYRTAKGTVSRQQ 122 + + + RR +MKG+L + G A GW W + AD+ T G VS Sbjct: 72 SYVLDNTSLINRRQLMKGVLGVTGVAALGWIGWSETSLPRIASAWMADFHTQVGQVSAYD 131 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT--AL 180 LEDG+ + LNT SA + + L GEI + T + R F V G + Sbjct: 132 LEDGTKIWLNTNSAMNRSNGHDYPGLSLVTGEILVQTKASSDSRAFSVSCAHGVIRSGVD 191 Query: 181 GTEFTVRQQDN-FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 T F VRQ + T L V + AV + L + + + G+ + F+A +P Sbjct: 192 KTRFCVRQLSDKQTVLAVYEGAVSLALLDS-QLSKTLYVGQEVVFNAQSISDTRPASLLY 250 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 SW +L D PL +A + RY DP++A LR+ GTFP + D +L++++++ Sbjct: 251 ESWRNGLLIVEDMPLANFMAEIGRYHYVHFNLDPSLADLRVVGTFPTHDMDLVLSMLSKS 310 Query: 300 LPVKIQSITRYWINIS 315 P++I+ +W+ IS Sbjct: 311 FPIRIKHPLPWWVGIS 326 >UniRef50_A9IDD5 Transmembrane sensor n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IDD5_BORPD Length = 331 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 157/324 (48%), Gaps = 15/324 (4%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ----L 60 ++ + A+ WYA+L S +ARWQ W ++ AWQ VE++ + L Sbjct: 1 MSQPSHAVMEHAAQWYALLISGEASAADQARWQAWLAAHPHHRQAWQYVESVSQRVLAPL 60 Query: 61 GGVPGDVASRA----LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG-----EGLRADY 111 P A +H+ RR V+ G+ + GA + ++ ADY Sbjct: 61 QDTPDPRQMAAKVYAVHERARMRRRVLAGIGTIAGAAALGWAARPDSPMAGAIAAWTADY 120 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT G + + L DGS + LNT SA D R + L GEI ++TA+ RPF V Sbjct: 121 RTGAGDIRQFTLADGSQVWLNTASALDADMRGGLRRLTLAAGEILVSTAR-GDARPFVVD 179 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T QG++ ALGT FTVR++ T L V AVE+ A A +++ AG +F+A A Sbjct: 180 TAQGRMRALGTRFTVRREQGHTFLAVFDGAVEIRTARA-GAVQVIPAGWQTRFAAGTIEA 238 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 P D +W++ L + L +V+ L RY + P VA R+ GTFPL++ D Sbjct: 239 SVPADLAREAWSRGELVAWNLSLADVVDELGRYHPAHISLAPNVAQRRVFGTFPLRDMDG 298 Query: 292 ILNVIAQTLPVKIQSITRYWINIS 315 L +++Q ++++ +WI+I+ Sbjct: 299 ALAMLSQAAALRVRRPWPWWISIT 322 >UniRef50_Q82TB4 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82TB4_NITEU Length = 336 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 83/330 (25%), Positives = 140/330 (42%), Gaps = 20/330 (6%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + + L A+ W A L + + + W D ++ A++++E+L L Sbjct: 7 ITEELPETILEEAAIWQARLQHGETDIELQKAFNIWLAADARHRQAYEEMESLWGALETP 66 Query: 64 PGDV---------ASRALHDTRLTRRHVMKGL----LLLLGAGGGWQLWQSETGEGLRAD 110 + A++ + +L +R + +G L WQ + ++D Sbjct: 67 VTQLMAEQSDHTFAAKTVPLHKLRQRSLGRGFQCLALAACLVLAIVIGWQQDWVTRWQSD 126 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y T G + + D S +TLNT SA V F A +R VRL GE A RPF V Sbjct: 127 YMTVIGQETSFLMADNSRITLNTDSALAVDFTAERRQVRLLKGEAWFEVT-SADNRPFIV 185 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP----AQKRIVNAGESLQFSA 226 T G + GT F +R + + + + VE+ ++ G+ S Sbjct: 186 ATSAGSVRVTGTRFNIRLHQDTAIVSLDEGQVELSTPDHSNNPNGSPIVLFPGQQATLSP 245 Query: 227 SEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTF 284 + P D + T+W ++ L F D PL EV+ TL R+R+G + + + L++SG F Sbjct: 246 QGISSPSPFDHTAITAWLRNQLVFYDTPLAEVVDTLNRHRHGRIFITNQKLKALKVSGVF 305 Query: 285 PLKNTDAILNVIAQTLPVKIQSITRYWINI 314 D L+V+ TLP+ + +T Y + I Sbjct: 306 STDEPDTALDVMINTLPIHLLRLTDYLVLI 335 >UniRef50_A3NJI2 Sigma factor regulatory protein, FecR/PupR family n=38 Tax=Burkholderiaceae RepID=A3NJI2_BURP6 Length = 334 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 103/318 (32%), Positives = 161/318 (50%), Gaps = 10/318 (3%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 + R A W+ L S AR +W + + AW+ +E + +LG V + Sbjct: 13 VPERVARRAVQWWVELGAAPASDAMRARLARWRAEHPAHDAAWRHIEAVNGRLGHVASAL 72 Query: 68 ASRALHD------TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 ++RA +R R + +LL GG W AD RTA G Sbjct: 73 SARAARAALLPPRSRGRRAALKALAVLLFAGGGAWTGQAYLPWRAWGADVRTALGERRTI 132 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQGQLT 178 L DG+ + LNT +A D+RFD R VRL GEI +T+ +DA + R + T G + Sbjct: 133 TLADGTTVVLNTDTAIDIRFDDATRGVRLLRGEIMVTSGRDAARAVPRALVIATAHGDVR 192 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF-GAVKPLDD 237 +GT F+VR++ + T++DV AV + A + ++ AG F+ G + L Sbjct: 193 PVGTRFSVRERGDATRVDVFDGAVRIAPRRAVGRAPLITAGHGADFTRDALAGPPRVLGA 252 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W IL S+ L +++A + RYR G +RCD AVA LR+SGT+PL +TD IL+ + Sbjct: 253 SAGAWVDGILVASNLRLADLLAEIDRYRPGRVRCDAAVANLRVSGTYPLDDTDRILDTLR 312 Query: 298 QTLPVKIQSITRYWINIS 315 +TLPV ++ ++RYW+ + Sbjct: 313 ETLPVDVEYLSRYWVTVV 330 >UniRef50_B8L6A8 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6A8_9GAMM Length = 322 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 116/311 (37%), Positives = 168/311 (54%), Gaps = 10/311 (3%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 + L A+ W L + S + A+WQ W++ D + AWQ+ E L VP +A Sbjct: 12 PPRVLEQAADWMMRLHEDD-SAARRAQWQHWHDADPAHARAWQRAERLLALTAQVPTALA 70 Query: 69 SRALHDT-RLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 R L RR V++G+ LL A GGW W+ A RTA G S+Q L+DG Sbjct: 71 QRTLQPPASAGRRAVLRGVAALLVAPLGGWLAWRLWDDAAWDASARTAMGERSQQVLDDG 130 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQLTALGTEF 184 S+L L+T +A D+ FDAH R +RL +G++ + TA D RPFRV T G L ALGT F Sbjct: 131 SVLHLDTSTAVDIAFDAHARLLRLRHGQMLVETAADPQRPARPFRVATPYGTLQALGTRF 190 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 +VR L VQ AV + S P Q+R V+AG+ L+++ + KP + +W + Sbjct: 191 SVRLFAEDALLVVQHGAVRI---STPGQQRQVDAGQQLRWNLTRLPPPKPAPPGADAWVR 247 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 +L PL +V+ L RY++ LR DP VAGL +SG FPL + L+++A T ++I Sbjct: 248 GMLVADAMPLQQVLQELGRYQHRWLRVDPRVAGLPVSGAFPLDDLQRSLSMLAATHALRI 307 Query: 305 QSITRYWINIS 315 + WI++S Sbjct: 308 EQ--GLWIHVS 316 >UniRef50_Q4KDP8 Sigma factor regulatory protein PupR n=2 Tax=Pseudomonas RepID=Q4KDP8_PSEF5 Length = 344 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 96/307 (31%), Positives = 149/307 (48%), Gaps = 4/307 (1%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD---VASR 70 A W L +VS A W +W + ++ AWQ+ E L +L V +R Sbjct: 33 EQAMQWQLDLQEPQVSAATLAAWHRWRQAHPLHEKAWQRAETLAQRLQQVRSQGHSELAR 92 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 A L RR +K L LLL G G W + + ADY T G R L D + + Sbjct: 93 ATLVPNLGRRRALKQLGLLLVTGAGAWAARDTALVQDWSADYSTRVGQQRRITLADQTRV 152 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 LNT +A +RFD QR ++L GE+ +T A+ V T +G + F+VRQ Sbjct: 153 QLNTDTAIALRFDREQRRIKLLRGELLLTLARQDSLPALHVETAEGWIETSTARFSVRQL 212 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSF 249 T+L V Q + + + AGE +F+ + + +W++ +L Sbjct: 213 AGRTELSVYQGNLTLRPRDGGQPALSLGAGEQARFNRQGLLLRQAQNATQPAWSQGMLVA 272 Query: 250 SDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 + L + + L RYR+G L CDP++A L++SGTFPL +TD +L +A+TL ++++ TR Sbjct: 273 QGQALAQFLEELGRYRHGHLGCDPSLAQLKVSGTFPLADTDRVLFAVARTLQLEVRQFTR 332 Query: 310 YWINISP 316 YW+ + P Sbjct: 333 YWVTLKP 339 >UniRef50_Q82WU9 Putative transcriptional regulator, putative n=1 Tax=Nitrosomonas europaea RepID=Q82WU9_NITEU Length = 343 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 133/319 (41%), Gaps = 19/319 (5%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 D R + + A W+ + + V+ + A + W + +N A+ E L ++L + G Sbjct: 19 DDDRNHSGKEALDWFVRMQSDSVTEAERAAFIAWRDAKPENAQAYADTELLSHKLAALKG 78 Query: 66 DVASRALHDTRLTRRHVMK-------GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 A T + +M L LL+ WQ+ +Y T+ G Sbjct: 79 HSAYHIPRLTPDQKPSLMTMQSFNRIALFLLIIFSSAGLWWQTGIVSD---EYVTSAGEQ 135 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 LEDGS L LNT S ADVR+ +R V L+ GE A D R F VL Q+ Sbjct: 136 RHIPLEDGSKLELNTASHADVRYTRLERIVTLYSGEAYFDIA-DENYRRFVVLAGGLQVR 194 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK------RIVNAGESLQFSASEFGAV 232 +GT F VR + + V + VE+ + + + AG+ + + Sbjct: 195 DIGTRFIVRHDNEQVTVTVLEGEVELTRPALSDRSGELPATLTLLAGQQSHYRNEVITSA 254 Query: 233 KPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTD 290 P+D + +W + L F PL EV+ L RY + DPA+A ++G+F + Sbjct: 255 IPIDSVAAAAWREGKLIFKATPLREVVQELARYHPLRFVIHDPALADETVTGSFHIGELS 314 Query: 291 AILNVIAQTLPVKIQSITR 309 + L + Q L ++I + Sbjct: 315 SFLRALEQVLQIQIDTRNP 333 >UniRef50_B9JNI9 FecR iron sensor protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNI9_AGRRK Length = 317 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 9/313 (2%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + + +A+ W A L + A +Q W D + A+ ++ L L P Sbjct: 8 EIDDRLAEAAAGWVARLQSADATDLDRADFQCWLHADPSHAAAYDEMNALWGSLRDAPVS 67 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 + S + R V ++L + A + + Q + RADY T G V LEDG Sbjct: 68 LDSLKARRSS-GARAVGLAVMLGVIAASSYTIQQLGLIDRWRADYYTDVGEVRSVVLEDG 126 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 + + L+T +A VR+ A +R V L G+ K+ RPF V Q TALGT ++V Sbjct: 127 TQVDLDTDTAIAVRYTAGERRVELLRGQAFFDVTKNP-ARPFVVDEGQLSATALGTHYSV 185 Query: 187 RQQDNFTQ--LDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWT 243 + + V++ VEV ++ AG+++ AS + D T+W Sbjct: 186 QAPTGSLPQMVQVEEGIVEVKTGDND---TVLRAGDAMTVDASGKATLAKADVANETAWR 242 Query: 244 KDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + L FS PL +V TL RYR G VL D A ++SG F L NTD L +I LPV Sbjct: 243 QGKLVFSATPLSKVAETLARYRRGRVLVVDAQAADRKVSGVFDLSNTDEALAIIESNLPV 302 Query: 303 KIQSITRYWINIS 315 + +T + I Sbjct: 303 SVTRVTDALVFIR 315 >UniRef50_A9VXG0 FecR protein n=6 Tax=Methylobacterium RepID=A9VXG0_METEP Length = 324 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 6/309 (1%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 R A+ W A LS + ++ W + D + + +++ L +LG +P Sbjct: 18 DEDPVEREAAAWVARLSSSDATEADHRAFETWRKADPVHAAVYAEMDALWRRLGHLPDPR 77 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 + T + GL + G +++ + LRAD + G + L DGS Sbjct: 78 PRKTSDKTSNKTPKSLAGLAA-VALIAGALAYETGLLDRLRADLWSGVGAIEHATLPDGS 136 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 + LNT +A VRF +R + L GE + D RPF V + A+GT F +R Sbjct: 137 RVDLNTDTAIAVRFTEGERGIALLRGEASFDVVPD-RSRPFVVRGGGLSVRAVGTRFFLR 195 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 + V + V+V S + +V+AGE ++ + +T+W L Sbjct: 196 ADGADRPVGVAEGRVDVSAESG---RVVVSAGEEVRIGGDALHVAAADVERATAWRDGRL 252 Query: 248 SFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 +S KPL V+A L RYR G ++ D + R++G F +NTD L+VIA T+ +I+ Sbjct: 253 IYSGKPLAAVLAELNRYRRGRIVLLDRGLGERRVTGAFDARNTDDALDVIAATMGTRIRR 312 Query: 307 ITRYWINIS 315 ++ + + Sbjct: 313 LSPLLVLVG 321 >UniRef50_Q1IGG4 Putative FecR-like transmembrane sensor n=2 Tax=Pseudomonas RepID=Q1IGG4_PSEE4 Length = 325 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 96/314 (30%), Positives = 144/314 (45%), Gaps = 15/314 (4%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 Q A+ WY L + V+ ++ + W Q + AW +V L L Sbjct: 13 MPDSEQLFAEATAWYYRLQADDVTSAEQQAFAAWRGQGPEQAQAWDEVLALLGALQAPAR 72 Query: 66 DVASRALHDTRLTRRHV------MKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 + + R R ++LLG G W + RADY TA G Sbjct: 73 HLREQQRQQWRRPVRRAWPKVASAAAAMVLLGLLVGQTSWP----DRWRADYATATGESR 128 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 QLEDGS + LNT SA V A +R VRL GE D+ RPF V + G + Sbjct: 129 SIQLEDGSRIQLNTDSALQVELTAGERRVRLLRGEAWFEVTHDS-ARPFLVRSGDGWVRV 187 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE- 238 +GT+F+V + D T++ + + VEV + AP + G++L+++AS GAV P + Sbjct: 188 VGTQFSVARDDRQTRVQLDRGKVEVRVGQAP--SVFLQPGQALEYTASGVGAVHPFEPSR 245 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W + L FS +PL EV+ L RY G L A+ G ++SG F + +A+L + Sbjct: 246 AFAWRQRQLVFSQQPLAEVVEELNRYWPGQTLVLGDALRGRKVSGVFEIDKPEAVLKALT 305 Query: 298 QTLPVKIQSITRYW 311 TL V+ + T Y Sbjct: 306 HTLGVRAEQYTPYL 319 >UniRef50_A6X2N0 Anti-FecI sigma factor, FecR n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X2N0_OCHA4 Length = 314 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 13/306 (4%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH-- 73 A W+ +L + VS + W D ++ A+++ + L + V + Sbjct: 13 ALEWFVLLQDKTVSADDRRAFSAWIASDPAHRVAYERAQTLWQRFDAVKPEYDRIRQSGH 72 Query: 74 --DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTL 131 D R+ RR V+ G L L G L + GL A Y+T G L DGS + L Sbjct: 73 KSDGRVGRRGVVLGGLAALVLLPGAYL---LSRPGLFATYQTGVGERRSFTLADGSTVEL 129 Query: 132 NTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDN 191 + SA + F + R + L G+ A D RPF V G +TALGT F V+ D Sbjct: 130 GSYSALSLDFSGNGRNLVLHEGQGFFQVASDP-SRPFVVSANGGTITALGTAFDVKLIDR 188 Query: 192 FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST-SWTKDILSFS 250 + V +HAV V + ++ G + + E + D ++ +W D + F Sbjct: 189 AVTVSVVEHAVSVAFGQSD--PVRLDEGWQITYGGDEAALPQRADPQTVEAWRNDRIIFE 246 Query: 251 DKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 D PL V++ L RYR G + D + + ++ F ++ +A L IA+TLPV++ + Sbjct: 247 DVPLSRVLSELERYRRGRIFLTDTEIGNMPVTAIFDTRDAEAALATIAETLPVRVLN-GS 305 Query: 310 YWINIS 315 W+ + Sbjct: 306 GWVTVV 311 >UniRef50_Q2RUF5 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUF5_RHORT Length = 328 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 91/319 (28%), Positives = 142/319 (44%), Gaps = 16/319 (5%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 + L+ A+ W+A L + + + W +D A++Q E L L +A Sbjct: 14 PEKFLKQAAIWHARLREDD---RHRKAFALWLGEDPRKAEAFRQTERLWAALEAPTAALA 70 Query: 69 S--------RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG--EGLRADYRTAKGTV 118 + R + RR + + L + G L G + LRAD TA G Sbjct: 71 TDGAALMVRRQRRPPIIWRRSAGRRVALAVVLALGLVLAPRGQGLIDSLRADDVTAPGER 130 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 L DGS++ LNT SA V R +RL+ GE A DA +RPF V T G +T Sbjct: 131 RSLVLADGSVVALNTDSALAVAMGGDHRRLRLFRGEAWFEVAHDA-RRPFVVETGDGTVT 189 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD- 237 GT F +R + T++ + + VE+ A A Q +I+ GE + GA+ D Sbjct: 190 VTGTRFNLRIDEAGTRVSLSEGRVELSPAHAAGQVKILRPGEQAVVGKTAVGAIDTFDAT 249 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLRLSGTFPLKNTDAILNVI 296 T W + + F D L +V+A L RYR G + +A LR+SG F + + + +L + Sbjct: 250 AVTGWRRGQIVFYDTALRQVVAELNRYRRGPILLARRDLADLRVSGVFDVSDPEGVLAAL 309 Query: 297 AQTLPVKIQSITRYWINIS 315 TLPV++ + + + Sbjct: 310 TGTLPVRMTKVGGLLVVLR 328 >UniRef50_B7X445 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X445_COMTE Length = 324 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 103/319 (32%), Positives = 154/319 (48%), Gaps = 18/319 (5%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL---- 60 ++ S A +A W L ++S +Q ++QW E ++ AWQQ++ L Sbjct: 1 MSPSLNPATEAAIEWLVCLHSGQMSQEQRRGFEQWLEAAPAHRAAWQQLQAPLQTLLQPL 60 Query: 61 --------GGVPGDVASRALHDTRLTRRHVMKGLLLLLG--AGGGWQLWQSETGEGLRAD 110 G + G +RA TR RR +++G L L G AG GW L + A Sbjct: 61 RSSGPEHVGQLLGQTLARAEAGTR-RRRQILRGALALGGISAGCGWLLDRQTPLAQWSAS 119 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP-FR 169 RT G L DGS +TL+ +SAAD+ FDA QR V L G + A P F Sbjct: 120 LRTDTGQRREFTLPDGSTVTLDARSAADLAFDAGQRRVILRLGALVARAAPQTPGGPAFV 179 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V T GQ+ ALGT F+VR F+ + + +H+V + A Q ++ G S +F Sbjct: 180 VQTMHGQIRALGTRFSVRLNPQFSSVGMLEHSVRITTAGGAQQ--VLAEGHSARFDTQGI 237 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 A +W + +L D PLGEV+ L YR G +R A L++ GT+ L++T Sbjct: 238 WADASAPSSMAAWQQGMLEAHDLPLGEVVQALRAYRRGWIRVSAHAAALQVYGTYSLEDT 297 Query: 290 DAILNVIAQTLPVKIQSIT 308 D L +A+TLP++++S + Sbjct: 298 DRALAALAETLPIRLRSYS 316 >UniRef50_C6DBT1 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacterium RepID=C6DBT1_PECCP Length = 322 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 87/322 (27%), Positives = 143/322 (44%), Gaps = 12/322 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M D A W +L + +++W ++ ++ A Q++E + Sbjct: 1 MARRHMDDP--IAEQAIEWMVLLRSGEATQTDYDEYRRWRYENPLHERACQRIEQTLGKF 58 Query: 61 G----GVPGDVASRALHDTRLTRRHVMKGL-LLLLGAGGGWQLWQSETGEGLRADYRTAK 115 +P + +AL R+ + GL ++ + + L Q L +D +TA Sbjct: 59 QPLLAALPHEPIRQALLAPSGRRKVLQYGLGMVAVASLSSLLLNQHYPLSPLLSDVKTAT 118 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQ--RTVRLWYGEIAITTAKDALQRPFRVLTR 173 + L DGS L LN ++A D+ + R V + G I DA QRPF + T+ Sbjct: 119 AQRQQVPLSDGSTLMLNARTAVDINVEPKNSIRQVGVLNGGIFAKIKPDA-QRPFIIDTQ 177 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 G + AL VR + + V + +V + Q ++AG+ + F S V Sbjct: 178 MGNIVALQANVNVRYESGGVHVGVLDNIAKVT--NHAGQSLRLHAGQGVWFDRSTLYQVA 235 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 + +W + L D+ L VI+ L Y G++R DPA+A LR+SG FPL N + L Sbjct: 236 VTPETEIAWMQGRLEVRDRSLASVISALRDYTPGIIRLDPAIADLRVSGNFPLDNLNYTL 295 Query: 294 NVIAQTLPVKIQSITRYWINIS 315 + +AQT+P+ I T YWI+I Sbjct: 296 DSLAQTMPIAIVHTTDYWIHIR 317 >UniRef50_Q0AEB9 Putative FecR n=2 Tax=Nitrosomonas RepID=Q0AEB9_NITEC Length = 320 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 15/309 (4%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 Q L+ A W+ +L E + + + ++ +W+ +++ +Q A+ E L ++ + Sbjct: 7 PDEQLLKQALKWFFLLQSEHCTDEDKRKFNRWFCKNEAHQAAYTHAERLWSETDKLKETP 66 Query: 68 ASRALHDTRLTR-RHVMKGLLLLLGAGGGWQLWQSETGEGLRAD---YRTAKGTVSRQQL 123 LH+ R R +H G+ S + A+ Y T G L Sbjct: 67 DIPGLHEARRRRPKHQPAGIFGWALFFLISSALMSISWLEYNAETVTYSTRLGEQRLISL 126 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS + +NT + VR QR + L GE A + RPF V T + Q+ +GT+ Sbjct: 127 ADGSRINMNTATRLHVRISYLQRKITLDAGEAVFDVAHETW-RPFVVHTDKLQIQDIGTQ 185 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAG-ESLQFSASEFGAVKPLDDEST-S 241 F V +Q + + V + AVE+ ++ G + S S+ ++P+D E + Sbjct: 186 FNVHRQQDEISVTVLEGAVEI-------DGVRLDEGYQQYYSSRSDHAVLRPVDTEQIAA 238 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W L F PL V L RY + DPA+A LSGTF ++ L+ + + L Sbjct: 239 WQHGRLIFRQTPLAAVTTELERYHPVHFIFTDPAIAHETLSGTFGTRDLPLFLSSLEKAL 298 Query: 301 PVKIQSITR 309 PV+++ + Sbjct: 299 PVRVKKLPD 307 >UniRef50_Q4K9E6 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K9E6_PSEF5 Length = 326 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 87/312 (27%), Positives = 137/312 (43%), Gaps = 12/312 (3%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 ++ + A+ W+ L VSP+Q+ R+QQW +D ++ +Q +E L VP Sbjct: 9 AQARIRDEAAAWFTRLQEPEVSPEQQLRFQQWLAEDPQHRHEFQLLEALWAATDLVPRAR 68 Query: 68 AS------RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 A R R + + L G G ++ A + TA G Sbjct: 69 LQALCATPPAKARRRPLLRFALAAGVATLAVGLGLFSGLNQPV-SYSAQFVTALGERRHV 127 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 L DGS + LN++S VR+ +QR + L GE D RPF V G++T G Sbjct: 128 ALPDGSQIDLNSRSHLQVRYARNQRLIELVEGEALFNVEHDT-DRPFVVAAGAGKVTVTG 186 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI-VNAGESLQFSASEFGAVKPL--DDE 238 T F VR+ + T++ V+Q V+V A I + G+ A + Sbjct: 187 TRFDVRRDERQTRVAVEQGRVKVQGRDAATDDFIALTPGQGTHVDEHGKVAQAYAVNPEA 246 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIA 297 T+W L F++ L EV+A ++RYR LR AV LRL+ F +T A+L + Sbjct: 247 LTAWRSGKLVFNNASLAEVVAEVSRYREQPLRVASAAVGELRLTSVFKSDDTQALLKALP 306 Query: 298 QTLPVKIQSITR 309 LPV+++++ Sbjct: 307 SILPVEVRTLAD 318 >UniRef50_Q2KXL7 Regulator of iron dicitrate transport (Fragment) n=3 Tax=Betaproteobacteria RepID=Q2KXL7_BORA1 Length = 318 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 102/313 (32%), Positives = 158/313 (50%), Gaps = 8/313 (2%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 + A W L+ P A +++W D++ AW +V+ + +P +A Sbjct: 8 PASVVDEAIAWSVKLNFSSPDPGTCAAFERWRRAAPDHEQAWTRVQTVNADFSALPQGLA 67 Query: 69 SRAL-HDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 L TR RR V+K L L G GW + + + AD T G R L DG Sbjct: 68 LDTLTATTRRRRRAVLKSLAALGGLASTGWVIREHAPWQA--ADVSTGVGQRDRLTLADG 125 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQGQLTALGTE 183 +LL LNT SA +R + +R + L+ GEI+I T DA RPF V T G ALGT Sbjct: 126 TLLMLNTDSAVGLRMEGAERVLVLYRGEISIQTGADAASPVKRPFFVRTPFGTAQALGTR 185 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F VR + + ++ VQ+ AV + AS A + I AG++ + + ++ S +W Sbjct: 186 FVVRLAEAYARISVQEDAVALRPASG-ADRMIAQAGQTWRLDSQRALPMQTPAITSDAWL 244 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + D LG+++A L RYR G + C P VA L++SGT+ + ++D L +A+TLP++ Sbjct: 245 AGAIEGQDMRLGDLLAELARYRPGRISCAPEVADLKVSGTYHVDDSDRTLAFLARTLPIR 304 Query: 304 IQSITRYWINISP 316 ++ TRYW+ + P Sbjct: 305 LRYWTRYWVAVGP 317 >UniRef50_Q6FBE6 Membrane bound regulator in multi-component regulatory system with cytoplasmic FecI (Sigma factor) and FecA (Outer membrane receptor) n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FBE6_ACIAD Length = 313 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 5/310 (1%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + R Q L A W + + ++ + ++QW + Q +Q WQQ L + +P Sbjct: 5 NERHQILEEAVEWLMQMKQKPLNEIELLEFEQWKNRSQLHQSIWQQAYQLEEKFQSLPSH 64 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 +A + + H L++L L+ + ADYR +L DG Sbjct: 65 IAIPIIQKQKS---HPDIWLMVLSCLPLLGLLYVMNQQQQWTADYRNGFHAPQTVKLPDG 121 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 + LN+ +A DV++ A +R + L GEI I T D RPF V T+QGQ ALGT++ V Sbjct: 122 GKIILNSNTAIDVKYTAKKRDIILRKGEIWIETQHDVKNRPFTVYTQQGQAQALGTKYLV 181 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 + +Q+ V + AV+V + Q I+ G+ + + +V+ D WTK + Sbjct: 182 KIDQKSSQIAVLKGAVKVQPKT-NNQYVIITKGQKISINQYNLHSVEYFDHSEIGWTKGL 240 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 + ++ PL E + L Y++ ++ DP V+ +++SGTFP+ N + ++ T + + Sbjct: 241 IMVNEIPLSEFVQKLRPYQSALIYLDPEVSNIKISGTFPIANMAQLYEMLENTYAIDVDR 300 Query: 307 IT-RYWINIS 315 + I I Sbjct: 301 YAMNHIIRIR 310 >UniRef50_C6XBM0 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBM0_METSD Length = 327 Score = 250 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 98/324 (30%), Positives = 149/324 (45%), Gaps = 15/324 (4%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 L +++ + +A W L +A +++W +Q AWQ++ Sbjct: 5 KALASEAVDPVVLTAIDWMVRLDNGHAPADVKAAFERWIAASDRHQQAWQEMTRALQPAS 64 Query: 62 GVPGDVASRALH----------DTRLTRRHVMKGLLL-LLGAGGGWQLWQSETGEGLRAD 110 + RR ++ G+ L L+G G + L +S TG L AD Sbjct: 65 QLQSAQHQSPAQLAVIREVLSAPPSPQRRRLLNGMALVLVGLGTAYLLKRSPTGMALTAD 124 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 T+ L DGS LTL+ +SA D+ F A +R + L G + A D L RPF V Sbjct: 125 IATSTAERKTVILADGSQLTLDAESAIDIHFSAGKRWLTLHAGACIVQVAAD-LARPFTV 183 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 T G +TALGT F VR+Q + + V QH+V LLA+ P Q+ +++ GES F ++ Sbjct: 184 ATPHGSVTALGTRFMVRRQPDRSLAVVLQHSV--LLAAGPHQQ-VLSEGESAWFDSNGIA 240 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTD 290 A + +W +L ++ LGEV+ L YR LR PA + LR+ G F L + + Sbjct: 241 AAREDMRSYAAWEDGVLDVRNQSLGEVVDALRAYRKDYLRVSPAASKLRVFGVFQLDDPE 300 Query: 291 AILNVIAQTLPVKIQSITRYWINI 314 L +AQ LPV+I + I Sbjct: 301 RSLRTLAQALPVRITHYGPWLTLI 324 >UniRef50_C6D936 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacterium RepID=C6D936_PECCP Length = 315 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 102/321 (31%), Positives = 153/321 (47%), Gaps = 13/321 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 ++ + + + L +A+ WYA L E S WQ+W QD +Q AWQQVE + + Sbjct: 2 ISSITSSIPKDVLYAAAEWYATLYDEDCSEHDRQAWQRWLRQDDTHQLAWQQVEQIHARF 61 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 V +AS L RR ++K L ++ GG S E ADYRT G Sbjct: 62 HAVDSQLASSVLSKRGEERRRMLKLLAIVSLTGGAGF---SLPWESYAADYRTGTGETRE 118 Query: 121 QQLEDGSLLTLNTQSAADVRFD---AHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 +E G L LNT SA + + + T +L GE+ + + R+ T G L Sbjct: 119 LSIETGMTLWLNTDSALNQQGSPALSQPLTFQLIKGELMLD---NQTAHAARLTTPHGDL 175 Query: 178 TALG--TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 A ++ +R + L V EVLL +A R V AG+ + F+ + P+ Sbjct: 176 AASAHTSQLALRYTSAHSVLSVFSG--EVLLQTAVPAARRVTAGQQVIFTRDKSSEPTPV 233 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 ++ SW K L + PLG+ I ++RY +G D AV LR+SG FPL TD +L+ Sbjct: 234 ENFRQSWRKGQLVADNMPLGQFINEVSRYHSGYFHVDSAVTTLRISGVFPLHETDRLLDA 293 Query: 296 IAQTLPVKIQSITRYWINISP 316 +A+TLPVK+ +W++I P Sbjct: 294 VARTLPVKVSRRFSWWVDIQP 314 >UniRef50_C1DGX1 Anti-sigma factor, FecR-like protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGX1_AZOVD Length = 311 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 102/322 (31%), Positives = 153/322 (47%), Gaps = 22/322 (6%) Query: 1 MNPLLTDSRRQAL----RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL 56 M L D Q L A W L + ++QW +++ A E L Sbjct: 1 MPALPDDELDQPLPPLIEEALQWLVRLHAGDAADNDWLAYEQWCRSSPEHRSAALVAERL 60 Query: 57 RNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKG 116 +LG V R RR V LL G WQ G ADYRTA G Sbjct: 61 WQELGSVL----------RRPPRRIVPIVGALLALGLGLVLSWQGH-ERGWMADYRTAMG 109 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 +L DGS L L ++ D+ FDA +RT+RL+ GE+ + A D RPF V G Sbjct: 110 EHRHLELADGSQLELAPETRLDLDFDARRRTLRLYTGELYVRVASDP-ARPFLVEAADGS 168 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 + ALGT F VR+ + +L V +HAV V ++ V AG+SL++ A +D Sbjct: 169 IRALGTGFDVRRDGSRVRLVVTEHAVRVSRGD---ERIDVQAGQSLEYGEHGLSAPVAVD 225 Query: 237 -DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILN 294 D +T+W + L F +PLGEV+ L+RY+ G+L D + L ++G F ++ DA+L Sbjct: 226 IDSATAWRRHRLLFDGQPLGEVLDALSRYQPGLLLVRDERLRRLPVTGLFDTRDPDALLE 285 Query: 295 VIAQTLPVKIQSITRYWINISP 316 ++ ++LP++++ + + I P Sbjct: 286 LLERSLPIRVRRL-PWVTLIEP 306 >UniRef50_B0KLJ0 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonadaceae RepID=B0KLJ0_PSEPG Length = 324 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 105/325 (32%), Positives = 155/325 (47%), Gaps = 17/325 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVE-NLRNQ 59 M+ D + A W L R + W +QD +Q AW ++E L + Sbjct: 1 MSRPALD---RVSEQAIDWMVELRAATPDAALLQRVRLWLQQDPAHQQAWNRLEQRLGHP 57 Query: 60 LGGV---------PGDVASRALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRA 109 L + A R L +RR V+ + L G W W+S+T +G A Sbjct: 58 LAALHALDQRAPGQAAEARRLLMQPTRSRRDVLGAMASLGLLGTALWGGWRSDTAQGWLA 117 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 D T +G L DGS L+LN+ SA DV+FDA QR V L +GE+ I A+D L RP R Sbjct: 118 DLHTGRGERRSFTLADGSRLSLNSASAVDVQFDAGQRLVVLRHGELLIQVARDPL-RPLR 176 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V T QGQ+ ALGT F V Q+++ T++ V QH+V LA Q + G++ ++ Sbjct: 177 VRTAQGQVQALGTRFLVSQEEDATRVVVLQHSVRASLAD--GQWAELQQGQAALLRSNTL 234 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 + + +W + L D+PL EV+ L Y+ G +R PA GLR+ G FPL Sbjct: 235 ERLTGEQQQRAAWLEGRLEVLDQPLHEVVDALRPYQRGYIRLAPAARGLRVQGVFPLDQP 294 Query: 290 DAILNVIAQTLPVKIQSITRYWINI 314 L +A+ LP+ ++ + + I Sbjct: 295 QQALKALAEALPISVERYGPWLMLI 319 >UniRef50_Q15XC6 Putative FecR n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XC6_PSEA6 Length = 350 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 144/341 (42%), Gaps = 31/341 (9%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + +++ R AS W A + + ++ + W +++ +++ L +++ + Sbjct: 7 FPNDKKRVKREASEWIARMEQDELTASDKTELNAWLAISPEHEKQLKRLAQLWDKMSEIG 66 Query: 65 GDVASRALHDTRLTR------RHV------MKGLLLLLGAGGGWQLWQSETGEGLRADYR 112 + + + + R L+L + L S Y Sbjct: 67 ERSSLQEQSTEKHKKYSLFGHRLAQLSYKTAAFAALVLAIPIIFYLQGSLENSSKNGQYF 126 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T G L DGS L LNT S +V + QR + L+ GE A+D RPF V Sbjct: 127 TKIGEQKNIILTDGSELLLNTNSIVEVNYTRKQRNITLFQGEANFGVARDK-SRPFTVKA 185 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL-------------LASAPAQKRIVNAG 219 G + ALGT F+VR + N + V V V A + IV+AG Sbjct: 186 GTGDVRALGTNFSVRLKGNLVNVLVSHGTVRVRANENIDATHHADNFAHKDKNQVIVSAG 245 Query: 220 ESLQFSASEFGAVKPLDDESTS----WTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPA 274 ++ F E +V+ + DES + W K LSF D+PL +V+A L+RY N ++ D + Sbjct: 246 NNVVFDDIEVESVEQVSDESIAKKLYWRKGFLSFDDEPLSDVVAELSRYTNLNIVIADKS 305 Query: 275 VAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 + +++ G +P+ N + + + L + ++ ++ + I+ Sbjct: 306 IQAMKVGGFYPIDNLETVFTTLELNLGLHVKKMSGGYYYIT 346 >UniRef50_Q4KBG4 Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Pseudomonas fluorescens RepID=Q4KBG4_PSEF5 Length = 325 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 116/316 (36%), Positives = 167/316 (52%), Gaps = 10/316 (3%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV----- 63 L+ A+HWY L + S +Q +WQ W+EQ +++ AW VE + +L + Sbjct: 10 SHACLQQAAHWYVQLQDQGSSDEQRRQWQDWFEQSAEHRQAWSYVERVSQRLLPLQEANT 69 Query: 64 --PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQ-SETGEGLRADYRTAKGTVSR 120 A A L RR V+ LLL G W+ + RADY T G V Sbjct: 70 RPSASRALSAARHPVLARRQVLGALLLAGLGWGTWRNSPLPQALSRWRADYATGTGEVRD 129 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DG+ L LN SA DVR+ QR + L GEI I TAKD +RPF V T G+L AL Sbjct: 130 TLLSDGTRLWLNALSAVDVRYSTEQRLLALHLGEILIDTAKDP-RRPFLVQTEHGRLRAL 188 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F+VR + + L+V AVEV AS Q ++VNAG+ L+F G ++ Sbjct: 189 GTRFSVRCGASDSLLNVYAGAVEVRSASG-LQVQVVNAGQQLRFDGRTLGPLQAASAARE 247 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +W+ +L + PL +++ L RYRNG L CDPA+A L + G+FPL ++D L ++ L Sbjct: 248 AWSHGLLLADNLPLEQLLEELGRYRNGHLGCDPAIAQLPVMGSFPLHDSDQALALLEAAL 307 Query: 301 PVKIQSITRYWINISP 316 PV+++ + +W+ + P Sbjct: 308 PVRVKRLASWWVTLEP 323 >UniRef50_Q88PI4 Transmembrane sensor, putative n=6 Tax=Pseudomonas RepID=Q88PI4_PSEPK Length = 328 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 91/315 (28%), Positives = 134/315 (42%), Gaps = 17/315 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M TD+ R A+ W+A + + W D+ ++ ++ + + Sbjct: 9 MKQHGTDAVR---EQAAAWFARVQDAPRDAGLHKQLHAWLASDEHHREEYEHLCRVWQAA 65 Query: 61 GGVPGDVASRALHD---TRLTRRHVMK----GLLLLLGAGGGWQLWQSETGEGLRADYRT 113 +P +L RR M+ + ++ G GW W + +T Sbjct: 66 DFIPRQHLEALCRPDPVQQLPRRRFMRQALAASVAVVALGLGWSGWHHLQL-NHQGSLQT 124 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 A + +L DGS L LN + V F A QR VRL GE+ + A D+ RPF V T Sbjct: 125 AFNERRQVELPDGSHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDS-NRPFVVDTA 183 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 QG + GT F VR T++ V+Q +V V + AG+ A A Sbjct: 184 QGSVIVTGTRFDVRLDPASTRVAVEQGSVRV--QGKGDSPAQLTAGQGSHIDAQGLVAAP 241 Query: 234 PLDD--ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDP-AVAGLRLSGTFPLKNTD 290 + T+W + L F + L EV+A +RYR LR P VA LRLSGTF +TD Sbjct: 242 YAVNTGAITAWRQGKLVFDNATLAEVVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTD 301 Query: 291 AILNVIAQTLPVKIQ 305 A+L + LPV I+ Sbjct: 302 ALLRALPSILPVAIK 316 >UniRef50_D0KIJ1 Anti-FecI sigma factor, FecR n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KIJ1_PECWW Length = 315 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 87/314 (27%), Positives = 133/314 (42%), Gaps = 21/314 (6%) Query: 10 RQALRSASHWYAVLSGERVSPQQ----EARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 Q + A+ W S WQQW D + + Q++ L P Sbjct: 8 EQIQQQAAEWILRFSEVEQDSDDAILLYKEWQQWCLIDARHPVVYHQMQQLWASATITPA 67 Query: 66 DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 + + R +R + L + GGW L Q AD RT G V R L+D Sbjct: 68 STSPK----PRSSR-----YVALAIFIAGGWLLSQ-LPYAYWLADQRTVAGEVRRIVLDD 117 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 GS L LN+ SA ++ F + +RTV L GE+ AKD RPF + + Q ALGT ++ Sbjct: 118 GSELVLNSNSAVNIAFTSQKRTVTLLRGEVYAHVAKDPRSRPFVIDSAQATAQALGTRYS 177 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VR T + V + V + P + + AG+ + E T W + Sbjct: 178 VRDAGEDTLVSVDESRVRITANKNPDIRLDLGAGQQIGLDQHHITRPVSASTE-TGWIHN 236 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDP----AVAGLRLSGTFPLKNTDAILNVIAQTLP 301 L F + P +VI L+R+ G++ DP + LR +G PL N+ L ++ +LP Sbjct: 237 QLIFENAPFIQVIDELSRHYPGLIYLDPRQRQELERLRFTGVLPLNNSQQALELLQHSLP 296 Query: 302 VKIQSITRY--WIN 313 + ++ Y WI+ Sbjct: 297 ISVRQSFGYISWIS 310 >UniRef50_Q3SUQ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SUQ1_NITWN Length = 330 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 87/308 (28%), Positives = 147/308 (47%), Gaps = 11/308 (3%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 + R A W+A++ ++V+ + ++ W +D+ ++ A+ +E L + +P + Sbjct: 28 DKISREAVAWFAIMHADQVAKSDQLAFRAWLRRDERHRVAYADIERLWSGASELPVVKSR 87 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 R +TRR G+L + GGGW +Q ADYRT+ G +L D S + Sbjct: 88 RREKRIAVTRRTFGAGMLAAMAGGGGWVAYQQHP----FADYRTSAGERRTVRLADDSSV 143 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ- 188 + +A V F + R V L GE + A D RPF V G+ A GT F V Sbjct: 144 DMAGATALSVDFSSKLRLVTLHRGEAYFSVAPDT-SRPFVVEAAAGRTMAAGTAFNVDYV 202 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES-TSWTKDIL 247 D+ ++ V QHAV++ +A A+ ++AG L + G + +D S W L Sbjct: 203 SDDDVRVTVAQHAVDIRVA---AEGARLDAGSQLTYGRESIGPPQAIDPASELGWRDGRL 259 Query: 248 SFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 F +P G V+A+L R+R G L + A+A ++ L+ + IL + TLP+++ + Sbjct: 260 IFISQPFGRVVASLNRWRQGRLMVMESALAVRPVTLIVDLQKSGNILATLEDTLPIRVVN 319 Query: 307 ITRYWINI 314 +T Y + Sbjct: 320 VTPYLTLL 327 >UniRef50_C1DGE4 Anti-sigma factor protein, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGE4_AZOVD Length = 317 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 12/321 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M P +A W A+ R+S + R++ W +++ ++ AW++++ + Sbjct: 1 MKPPRLSPEES---AAIEWLALQRSGRMSDTERRRFEGWLAENERHRGAWERLQRRLDSA 57 Query: 61 ----GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQL--WQSETGEGLRADYRTA 114 G P D+A + L +RR ++G L L G G G +GL AD TA Sbjct: 58 FAGIAGQPADLAQKTLLSAGSSRRQALRGALALAGLGLGGLGLTRPGMPLDGLVADLSTA 117 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G R L DGS + LN QS D+ +D QR + L G + DA +RPF V T Sbjct: 118 TGERRRFALADGSSVLLNAQSRVDIDYDGQQRRLYLRRGALLAEVTADA-RRPFVVETPF 176 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G++ ALGT F++ + T + VQ+ +V L S ++ AGE + ++ Sbjct: 177 GRVRALGTRFSIALGERETTVWVQE--AQVRLESRSGDSLVLAAGEGARLDPDGCQRLEA 234 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 +W L D+PL +IA L Y G LR A LR+SG FPL +++ +L Sbjct: 235 QRRSEFAWQDGWLELHDRPLETLIAALRPYHRGHLRLSRDAADLRISGLFPLDDSEQVLA 294 Query: 295 VIAQTLPVKIQSITRYWINIS 315 + + LP++I +W NI Sbjct: 295 SLEEILPLRIHRYLGWWTNIE 315 >UniRef50_Q3SN47 FecR protein n=2 Tax=Nitrobacter RepID=Q3SN47_NITWN Length = 318 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 10/308 (3%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + + A+ W+A + + S + W D + A+ ++ L +PG Sbjct: 17 RIVEEAAVWFATMHDGKPSAADTKALKAWLAADPRHVRAYADIDRLWTGAIELPGMKDRH 76 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 +TRR + +++ G W+ S ADYRTA G L DGS + Sbjct: 77 RAARKAVTRRRFGEAVVIGAVGLGAWRYLASHP----FADYRTATGERRTVNLADGSTVD 132 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD 190 L ++ + F +R + L GE T AKDA RPF V +G+ TALGT F V +D Sbjct: 133 LAAETKLSLAFTRERRGLTLHEGEAFFTVAKDAG-RPFVVEAGEGRTTALGTAFGVDYRD 191 Query: 191 NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-ESTSWTKDILSF 249 + + V V+V L + V+AG + + + G ++ + +W + L F Sbjct: 192 DSATVIVTDSTVDVALGE---ESARVSAGSLVTYDSRHIGELRQSETGTELAWREGRLVF 248 Query: 250 SDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 + PLG+ + L R+R+G ++ ++A ++ L T+ I+ +A+ +P++I + T Sbjct: 249 TQAPLGQAVQALNRWRSGRIVVMSTSLAQRPITLIVNLNRTETIVAQLAEEVPIRIVAAT 308 Query: 309 RYWINISP 316 Y + P Sbjct: 309 PYLTLLFP 316 >UniRef50_Q82W78 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82W78_NITEU Length = 334 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 18/321 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN +D +A++W+A + + + + W + D N+ +Q ++ + Sbjct: 1 MNRKHSDIPAHPRDAAAYWFARVHSGSFTQSDQEAFDSWLQADDLNRKEYQALDKIWQVA 60 Query: 61 GGV--------------PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG 106 G + P + L RLT V +++++G G + + Sbjct: 61 GQISAHELRAMLAEEPEPPQQIQKRLKRWRLTISAVAATIIIVIGFAGLFMPYGWLGEPF 120 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 A+Y T +G + L DGS+L +NTQ+ A V + ++R VRL GEI + DA R Sbjct: 121 YTAEYVTDRGERRTEVLPDGSILEINTQTTALVEYFENRRNVRLAGGEIMFSVETDA-AR 179 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS-APAQKRIVNAGESLQFS 225 PF V G + GT F V + + Q+ V+ +VE+ + + G Q Sbjct: 180 PFTVDAGSGTVLVTGTRFNVLRDQDQVQIAVESGSVEISSGHWWNRRTEQLTDGLGAQID 239 Query: 226 ASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGT 283 P D ++ T+W + + F D+PL V+ + RY + D + +R++G Sbjct: 240 PDSMTPASPADIDTLTAWRQGKIIFKDQPLASVVKEMNRYLPQPITITDHRLDQVRIAGV 299 Query: 284 FPLKNTDAILNVIAQTLPVKI 304 F ++ A L + +++PV++ Sbjct: 300 FNTGDSAAFLQALHKSIPVQV 320 >UniRef50_B7X004 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X004_COMTE Length = 350 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 103/316 (32%), Positives = 156/316 (49%), Gaps = 11/316 (3%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 D R A W+ L E S +++W W QD ++ AWQ+++ ++ +L G+ G Sbjct: 23 PDVPADLARQAVEWWLQLQEEPDSALLQSQWHAWRAQDPLHEQAWQRIQAVQQRLQGL-G 81 Query: 66 DVASRALHDTRL-------TRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 D AL + L RR V LLL+LG G WQ+ AD RTA+G Sbjct: 82 DTPLAALARSALVSRRGGDRRRAVQALLLLVLGGGAAWQMEAHLPWRNWVADVRTARGER 141 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQ 176 R L DG+ L LN SA D+ F A +R + L G+I + TA D+ Q RP V T G+ Sbjct: 142 RRLTLPDGTRLVLNGGSALDIAFGATERRLLLRAGDIHVVTAADSQQPARPLVVQTEAGE 201 Query: 177 LTALGTEFTVR-QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 + LGT FTV + + + V + AV + P Q+R++ AG+ A P Sbjct: 202 MWPLGTRFTVNVAEGQRSLVAVYEGAVRLRPRLQPQQERVLPAGQQAWLDMQGVAAAVPA 261 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 +E ++W +L + L V+ L L C PAVAGL++SGT+PL + I+ Sbjct: 262 YEEQSAWIDGMLVARNMRLDAVLQALQPATTVSLVCHPAVAGLKVSGTYPLDDVPRIMAT 321 Query: 296 IAQTLPVKIQSITRYW 311 + L ++++S+ R+W Sbjct: 322 LGTLLQLQVRSMRRWW 337 >UniRef50_Q48JU1 FecR protein superfamily n=19 Tax=Pseudomonas RepID=Q48JU1_PSE14 Length = 342 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 130/328 (39%), Gaps = 29/328 (8%) Query: 2 NPLLTDSRRQAL-RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 +PL + + A+ +A+HW L E + + ++QW + + ++ + + + Sbjct: 3 DPLFSKAEHDAITDAAAHWCMRLHAEDCTAAERKAFEQWLKAHPLHAMEYEAMREVWDIT 62 Query: 61 G---------GVPGDVASRALHDTRLTRR--------HVMKGLLLLLGAGGGWQLWQSET 103 G +P R RR V+ + + G G Q W +T Sbjct: 63 GQIEPLNPAPALPIQATQNNQPVLRRKRRLAPLAAAAAVIALAVPVTGYVGWNQGWLPDT 122 Query: 104 GEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA 163 E AD T L DGS LN + +R+V L GE + D+ Sbjct: 123 YESYNADTAT-----RLVVLADGSRAELNLGTELTYANYKDRRSVTLKKGEAFFEVSHDS 177 Query: 164 LQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL-ASAPAQKRIVNAGESL 222 PF V +G + GT F V + ++ + + +V+V + P+ ++ G Sbjct: 178 TH-PFVVDAGKGSIKVTGTRFNVWMYQDQVRVTLVEGSVQVSSDRAHPSSSHHLDPGMQA 236 Query: 223 QFSASEFGAV---KPLDDESTSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGL 278 + A + + D S +W L F+D PL + + + RY + +L D A + Sbjct: 237 SYKAGDDAPLISQTDTKDSSLAWRNGKLIFNDLPLSQALPLINRYLQTPILLADTATGAM 296 Query: 279 RLSGTFPLKNTDAILNVIAQTLPVKIQS 306 RL G+F ++ ++L + + LPV + Sbjct: 297 RLGGSFNTRDLSSLLASLPKVLPVYVTQ 324 >UniRef50_Q4KE62 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KE62_PSEF5 Length = 321 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 106/325 (32%), Positives = 153/325 (47%), Gaps = 14/325 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL---- 56 M+ D R SA W + +S QQW + ++++AWQ+V +L Sbjct: 1 MSGAAVDPR--VRDSAIDWLVRMQSGLMSAADHQALQQWRQASVEHEYAWQRVSSLPLML 58 Query: 57 ---RNQLGGVPGDVASRALHDTRLTRRHVMK-GLLLLLGAGGGWQLWQSETGEGLRADYR 112 N L A +A RR V+K L L L G WQ S A YR Sbjct: 59 QPGANLLADATARRALQAAGADPQRRRQVLKCLLALGLLGGISWQGADSTLVRSALASYR 118 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T G L DG+ L LNT SA ++ A QR+++L GE+A+ T + ++ T Sbjct: 119 TGVGERRHWALADGASLWLNTASAVNLDLSARQRSLQLIEGELALDTPAGSAS--LQLST 176 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 L + G VR TQ+ V + V+V PA + AG + G Sbjct: 177 PDAVLYSRGANLLVRHDRLGTQVTVLRGLVQVSARQHPA-PLALQAGWQTRVDGRGAGRP 235 Query: 233 KPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 P+D + +W + IL L +++A L+RYR G LRC AVAGLR++G+F L +TDA Sbjct: 236 SPIDTFLAQAWMRGILPAERMRLDQLLAELSRYRPGFLRCSEAVAGLRVTGSFQLDDTDA 295 Query: 292 ILNVIAQTLPVKIQSITRYWINISP 316 L ++A TLPV+I+ TRYW+ + P Sbjct: 296 ALALVANTLPVRIERRTRYWVTVVP 320 >UniRef50_Q82WX3 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82WX3_NITEU Length = 308 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 94/308 (30%), Positives = 143/308 (46%), Gaps = 22/308 (7%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 A+ W LS ++S Q+A ++ W QD ++ A++Q+ L + Sbjct: 14 EQAAEWVVRLSDSQISTAQQADFEAWLAQDIRHREAYEQISRLWQSV----------TPQ 63 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 R R + ++L+ G AD RTA G + + L DGS +TL++ Sbjct: 64 RRRKHRPAGLLASIVLVLIGIY-----CLPLSTWLADERTATGEIRQVALPDGSTITLDS 118 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDAL-----QRPFRVLTRQGQLTALGTEFTVRQ 188 SAADV FD H R + L G I DA RPF + R G ALGT + V Q Sbjct: 119 DSAADVVFDTHARRIILHRGRIFAAVVPDAAEQGAHHRPFIIENRDGTAQALGTRYIVEQ 178 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 + +++ V + +V V P Q V +G+S++F + + +P+ + SW + L Sbjct: 179 TGDHSRVSVVESSVNVTSRDRPDQSITVYSGQSIRFDSEQIHGQEPIPPAAASWVQSRLV 238 Query: 249 FSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 + + PL +VI L RYR G LR A A LR +G P + D L ++ LP+ I T Sbjct: 239 YRNAPLSQVIDDLARYRTGFLRISGAAAQLRFTGVLPADDPDTALKILQHALPIGIDRYT 298 Query: 309 R--YWINI 314 R WIN+ Sbjct: 299 RVLIWINL 306 >UniRef50_A3WYF9 Putative FecR n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYF9_9BRAD Length = 326 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 84/323 (26%), Positives = 135/323 (41%), Gaps = 21/323 (6%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ +A W+ L S A +++W ++ A+++V++L + Sbjct: 1 MDRESRTKPTDIDDTALEWFTRLR-GETSAADRAAFERWVAASPSHRQAFRRVQSLWSAA 59 Query: 61 GGVPGDVAS--------------RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG 106 VA RA + +R V ++ L GG L + + Sbjct: 60 ESPGVRVAQEESKNLSAYLDAMDRAKTRRKARKRGVATVIVGLAVLGGVIALERPNLFQD 119 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 +RAD +A+G +L DGS + L+ SA RF +R V L G + K A Sbjct: 120 MRADAVSARGERRTIELPDGSTVLLDADSALTQRFTNGERRVVLLRGGAYFSVVKAAQS- 178 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA 226 F V G + LGT+F VR ++ T + V Q V V S Q+ ++ G+ + F Sbjct: 179 -FVVEASSGTVEVLGTKFDVRLSNDDTVVTVAQGRVAVT--SPSMQRALLEPGQQVTFDK 235 Query: 227 SEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTF 284 G V+ D S +W + F +VI L RYR G ++ A+A R+SG+F Sbjct: 236 VGVGPVRNADLAASMAWHEGRFVFYQARFADVIGELQRYRPGRMVIASAALADSRVSGSF 295 Query: 285 PLKNTDAILNVIAQTLPVKIQSI 307 L + DA L + T+ + SI Sbjct: 296 TLDDPDAALESLRSTVNFETYSI 318 >UniRef50_B0KIR3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIR3_PSEPG Length = 323 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 145/319 (45%), Gaps = 13/319 (4%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV--PG 65 L++A++WYA L Q + RWQ+W NQ AW V+ + + + Sbjct: 7 PDHATLQAAANWYAQLLAAPQDLQLQLRWQKWLGTAHANQVAWDHVQRISQRFSPLKLQA 66 Query: 66 DVASRALHDTRLT----RRHVMKGLLLLLGAGGGWQLWQSE----TGEGLRADYRTAKGT 117 D + +AL R T RR V LL G+ W+ + L AD RT G Sbjct: 67 DASLQALGSVRRTDLDRRRAVGLLGLLCGGSLLALAGWRLPAARRQLQALSADQRTGTGE 126 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 V +L DG L LN+ +A ++ + A+ R + L GE+ + TA D RPF + TR G+L Sbjct: 127 VRSLRLPDGGQLWLNSATALNIDYRANLRRLELLAGEVLVETAHD--SRPFVIDTRHGRL 184 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT F+V Q+D +L V AV + A +V AG F + +D+ Sbjct: 185 QALGTRFSVWQRDQAARLSVFDGAVRLHPADGAG-SLVVAAGWQADFDRHGAQPPRAVDE 243 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +W L +D L E L Y G L P V LR+ G FP + + L ++ Sbjct: 244 SRQAWRDGRLLANDISLSEFSEQLRAYLPGHLGVAPQVQALRVMGNFPANDPERTLAMLE 303 Query: 298 QTLPVKIQSITRYWINISP 316 LP+K++ +W +I P Sbjct: 304 SALPIKVRKTLPWWYSIEP 322 >UniRef50_Q3SR62 FecR protein n=3 Tax=Bradyrhizobiaceae RepID=Q3SR62_NITWN Length = 377 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 137/319 (42%), Gaps = 17/319 (5%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 + A W+ +L E + + + W DQ ++ AWQ VE + L + +V Sbjct: 7 QSVDDQAVQWFVLLRDEDATAEDRRAFAHWLAFDQTHETAWQSVERMWGGLDALAPEVVR 66 Query: 70 RALHDTRLTR-RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 + R +R + LLL G GWQ+ + GL ADYRTA G L+DGS Sbjct: 67 QRRKPRRNSRLKRGAAVALLLAAIGIGWQMAPT----GLFADYRTAIGERRMIVLQDGSQ 122 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ 188 + L SA DV F +R VRL GE T KDA RPF V G++ LGT F V+ Sbjct: 123 VDLGAASALDVSFGTGERRVRLLTGEAFFTVTKDA-ARPFIVAAENGEVKVLGTAFDVKI 181 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKR---------IVNAGESLQFSASEFGAVKPLDDES 239 D AS A R +V G+ +++ + AV D ES Sbjct: 182 ADGVAVAVAHNAVQVSAQASTQAPDRPDVVPDAPVVVRQGQIVRYDFAGISAVGAADLES 241 Query: 240 T-SWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +W L F D PL V+ L RYR G ++ + R++ F T+ L+ IA Sbjct: 242 IQAWRHGQLVFRDVPLDTVLTELQRYRFGRIVLIGGTLGQRRVTAVFDAAKTEQALDTIA 301 Query: 298 QTLPVKIQSITRYWINISP 316 ++L ++I I P Sbjct: 302 ESLSLRIYRAAGLLTVIIP 320 >UniRef50_A7IJ25 Anti-FecI sigma factor, FecR n=3 Tax=Alphaproteobacteria RepID=A7IJ25_XANP2 Length = 320 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 89/315 (28%), Positives = 142/315 (45%), Gaps = 8/315 (2%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV-- 63 T R A +A W+ + +P + A +QQW DN+ + +E L L V Sbjct: 9 TTVRPTARDAALGWFVKMRSGEATPAEVADFQQWIAAAADNRREYDALEALWGDLDQVGD 68 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 P VA+ + R + + A + A RT G + L Sbjct: 69 PRRVAASVPASRPMMSRRGLFLGAAGVAAAVVAGVALGVPDWFDGA-IRTGVGEQRQLTL 127 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS + L+ SA ++F R + L G A D R F V G TA GT+ Sbjct: 128 ADGSRVVLDADSALSLQFTPQARRLTLQRGRAFFDVAPDP-ARAFSVTAAGGVTTATGTQ 186 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL-DDESTSW 242 F+V N + V + AV + + A + AGE++ + AS G + + D ++++W Sbjct: 187 FSVHLWSNEVTVAVSESAVSIR--AGAAALSRLKAGEAVSYDASGIGETEQVSDAQASAW 244 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 + L F D+PL +VIA + RYR G + D + LR+SG F ++ D +L I ++LP Sbjct: 245 RRGKLIFEDRPLRQVIADVNRYRPGTIMVTDSTLLRLRVSGIFDIRQPDGVLEAITRSLP 304 Query: 302 VKIQSITRYWINISP 316 V+ ++TRY + + P Sbjct: 305 VRSMALTRYLVLLYP 319 >UniRef50_Q4KAZ6 Sigma factor regulatory protein, putative n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KAZ6_PSEF5 Length = 315 Score = 240 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 93/316 (29%), Positives = 157/316 (49%), Gaps = 15/316 (4%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQV----ENLRNQLGGVP 64 +Q L A W +L P+Q+A W D ++ AWQ++ ++LR+ +P Sbjct: 2 EQQVLDQALEWLVLLQSGISPPEQQAACLAWRRADPQHELAWQRLAGIGQDLRDSTRSLP 61 Query: 65 GDVASRALH-DTRLTRRHVMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 A + L + RR ++KG++ L + A W + + L +DY TA G + Q Sbjct: 62 APHARQLLQARSHPGRRTLLKGIVGLGVVAASSWSVRERLLLPQLFSDYHTATGERRQLQ 121 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA--- 179 L G+ L L+T+++ D + +RL G + +T A P +V T G + Sbjct: 122 LAAGASLQLDTRTSLDQKASPQGLQLRLNSGRLLLTLGNAA---PVQVTTTDGHIQLAPR 178 Query: 180 LGTEFTVRQQD-NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 +V N T++ + + V A APA ++ G+ + + A+ + Sbjct: 179 SQLILSVGLPGINGTRVQLLAGSGSVSTAHAPA--LSLDPGQQVDIAQQRISALAAVPTT 236 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 + +WT+ +L +PLGEVIA L RYR G+LRC +AGLR+SG+F L DA L ++A+ Sbjct: 237 ANAWTQGLLIAERRPLGEVIAELDRYRPGLLRCSAEIAGLRVSGSFSLDQPDASLELLAR 296 Query: 299 TLPVKIQSITRYWINI 314 TLP++I+ + YW ++ Sbjct: 297 TLPIRIRRVMGYWASV 312 >UniRef50_C1DIF1 Anti-sigma factor protein, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DIF1_AZOVD Length = 335 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 92/334 (27%), Positives = 145/334 (43%), Gaps = 28/334 (8%) Query: 5 LTDSRRQ-ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 +TD+R L A W +L P++ A + W E + ++ AW++ E + +L V Sbjct: 1 MTDTRNDNLLEQALEWCVLLQDPNAGPEERAGFAAWLETSEAHRQAWRRAEEVWRRLDPV 60 Query: 64 PGDVASRA-------------------LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG 104 +AS A R+ L + G W+ + Sbjct: 61 AERLASGAGPSPDRLAATPAVAPVRPQALKPAFRRKTRALRALAAMLLLGAILGWRYDP- 119 Query: 105 EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL 164 ADYRTA +LEDGSL+ L SA DV + +R +RL GE A D Sbjct: 120 -AWLADYRTAVAEQREWRLEDGSLIRLAPDSALDVDYGTARRRIRLHRGEAWFRVAADP- 177 Query: 165 QRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF 224 RPF V + G ALGT F +R++ + ++ V +H V+V L Q++ + G++L + Sbjct: 178 ARPFVVESATGHTQALGTAFDIRRRGDRVRVLVSEHQVQVSL---DRQRQRLEPGQALTY 234 Query: 225 SASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSG 282 A F V+ +D +W L F D PL +V+A L RY G L D A+ L ++ Sbjct: 235 DADGFSPVRNVDVANELAWQNQRLVFQDAPLAQVLAELQRYMPGRLQLTDSALGSLSVTA 294 Query: 283 TFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 F + L +A L +++ I + + P Sbjct: 295 VFDTRQPRQALESLADVLALRLTRIGPWLTLVRP 328 >UniRef50_Q82VI9 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82VI9_NITEU Length = 343 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 90/336 (26%), Positives = 155/336 (46%), Gaps = 25/336 (7%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEAR--WQQWYEQDQDNQWAWQQVENLRNQL 60 P A+ W L+ + +++A+ ++ W +Q + A ++ + ++ Sbjct: 2 PEKQPIPDDIAEQAADWIVRLTAGDATEREQAQSGFEVWKKQHPLHAEAAASLQQVIGRV 61 Query: 61 GGVPGDV----------ASRALHDTRLTRRHVMKGLLLLLGAGG----GWQLWQSETGEG 106 V AL + +RR K + L+ A WQL Q Sbjct: 62 NEVRATTHGNPEPAHAALKAALAEGNRSRRRFRKTVATLVVACALLLPAWQLLQIYPPAY 121 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 L AD RT G L DG+ +TLN+ SA ++ FD +R + L GEI + A+D R Sbjct: 122 LMADLRTTTGQWQTHDLPDGTRITLNSISAVNLHFDIERRILELIKGEILVDVAQDT-DR 180 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA----QKRIVNAGESL 222 PF + T +G + ALGT F V + + T L + + V V A A + +V AGE + Sbjct: 181 PFLIETAEGSIQALGTRFVVDRHEQTTTLTMLESKVSVQTAEQRAEHSHESTLVQAGERI 240 Query: 223 QFSASEFGAVKPLDDEST--SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLR 279 +A A++ +D + +W L ++PL EV+ L R+R G + D A + G+ Sbjct: 241 HITAQGVSAIETIDTRTISDAWQYRHLVVQNRPLTEVLDELNRHRRGHILYDRAQLQGID 300 Query: 280 LSGTFPLKNTDAILNVIAQTLP-VKIQSITRYWINI 314 ++ PL +TD L ++ +LP ++I+++T Y + + Sbjct: 301 MAVVLPLDDTDRALQLLVDSLPMIRIRTLTPYLVLV 336 >UniRef50_Q15VP5 Putative FecR n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VP5_PSEA6 Length = 336 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 134/332 (40%), Gaps = 25/332 (7%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR--- 57 M+ + Q + A+ + A L +S ++E + W ++ ++Q + + + Sbjct: 1 MSSNMNQEVIQ--QQAATYVARLYSGELSAEEEMQIYVWCDRSPEHQQEFDSMLAIWDTS 58 Query: 58 -NQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRA------D 110 + + + L+ W L +A Sbjct: 59 NQLFQTAQPNKNKKMKKKKKNAYWLTSVAASLVCTVLVMWYLTLPGPAPLYQAAIPKPNT 118 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y TA G +S L DGS +TLNT SA + F QR V L GE AKD R F + Sbjct: 119 YHTAIGEISTVGLPDGSAVTLNTDSAIRINFTGQQRRVWLERGEAFFDVAKD-ESRIFSI 177 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA--------QKRIVNAGESL 222 T + + +GT+F VR+ D ++ V + V + ++ + + ++ AG Sbjct: 178 NTGEKTIRVIGTKFNVRKSDATLKVSVTEGLVAIQPSALASSEHIDFEEAETLLPAGSVG 237 Query: 223 QFSASEFGAVKPLDDESTS---WTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGL 278 F+ + E + W + I F+++PL VI RYR + + + L Sbjct: 238 AFNGTSEVITHVTSKEVLANQQWRQGIFRFNNEPLANVITEFNRYRLKKITLQNRDLGKL 297 Query: 279 RLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 ++SG F LK+ D+IL+ + LPV+I Y Sbjct: 298 KISGVFKLKDGDSILSALEAALPVEIDRYPEY 329 >UniRef50_C6X948 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X948_METSD Length = 348 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 97/320 (30%), Positives = 150/320 (46%), Gaps = 16/320 (5%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 ++R +R A+ W +L+ S EA + W + D ++ A + +L V Sbjct: 11 PAETRSAVVRQAAEWLVLLASPEASAADEAAFNAWVQADPAHRNAVVTMRGFVGKLSAVA 70 Query: 65 GDVASRA-----LHDTRLTR--RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 D + RA LH R R+ + +LLL G WQL + AD T Sbjct: 71 SDTSQRAVLQQALHKPASGRGWRNAVAAMLLLGAMLGSWQL--LNPWSAMFADLSTETAE 128 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 + L D S L L + +A D+ F AH+R + L GEI + A D +RPF V T G + Sbjct: 129 WKNEVLPDQSHLALASATAVDINFSAHERKLALLKGEILVDVAPDP-ERPFIVQTPHGTM 187 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT F V D+ T L + VE A Q RIV+AGE + SA +D Sbjct: 188 RALGTRFVVTLTDSGTTLTMLHSKVEAK-TEAQDQTRIVSAGEQVVLSAEHISTPVAIDT 246 Query: 238 E--STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILN 294 E + +W+ L D+P+ +V+ L RYR G++ + + +S PL +TD L Sbjct: 247 ESVAAAWSAHQLMVQDQPMDQVLDKLWRYRRGIVMYRTADMEAMHVSALLPLDDTDRALQ 306 Query: 295 VIAQTLPVKIQSITRY--WI 312 ++A + P++I+ +T + W+ Sbjct: 307 LLASSFPLRIRHLTPWLSWV 326 >UniRef50_A6SZL6 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZL6_JANMA Length = 299 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 92/297 (30%), Positives = 140/297 (47%), Gaps = 13/297 (4%) Query: 28 VSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDT--------RLTR 79 ++ + ++QW D ++ AW +V L N+ V D RA R Sbjct: 1 MTDSERRAFEQWRAADPSHELAWNRVAGLLNESLSVVRDAGLRAPGQVQAAQRALLNTRR 60 Query: 80 RHVMKGLLLLLGAG--GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAA 137 R +++G L+ G G + L AD +T G L DGS + LN +SA Sbjct: 61 RKLLRGALVFAGVGTTSVLLAERQIAVGQLWADLQTGTGQRQTFALADGSSVQLNARSAV 120 Query: 138 DVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDV 197 D+ F+ +R +RL GE+ + A DA RPF V T G + ALGT F V QQD +Q+ V Sbjct: 121 DIDFNQDRRQLRLRAGELIASVAPDAG-RPFLVQTTHGIIRALGTRFLVSQQDRQSQVVV 179 Query: 198 QQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEV 257 +H+VE+ Q + GE F S+ + +W+ +L+ + L EV Sbjct: 180 LEHSVELRTRD--GQHMRLREGEGATFDHSQIERIAGNASAHAAWSDGMLAVENATLAEV 237 Query: 258 IATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 +A L Y +G +R P A LR G FPL++ +L +A TLP+K+ + I+I Sbjct: 238 VAALKPYYSGYIRLSPEAASLRTFGVFPLEDPGHVLRTLAHTLPLKMHHYGNWLISI 294 >UniRef50_Q3SSZ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SSZ1_NITWN Length = 319 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 79/306 (25%), Positives = 137/306 (44%), Gaps = 5/306 (1%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG-GVPGD 66 + R+ A+ W S + +++W ++ ++N+ A++ + L + + D Sbjct: 9 ASRKRHEEAAAWVLKNRDINQSAHESRAFEEWLDRGEENRAAYEAAQRLMGEARTAILND 68 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 A R R + L A G S+ L A+ + G + +L DG Sbjct: 69 PALRNFKVKPRPRVAKTLAVAFLGAALAGSAFVYSDGPMRLLANAISGTGEMPTIELADG 128 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 + + LN SA RF A RTV L G+ AKDA RPF V GQ TALGT F + Sbjct: 129 TTIQLNAFSAISYRFTAETRTVTLLRGQAFFQVAKDA-SRPFVVEANGGQTTALGTAFDI 187 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE--FGAVKPLDDESTSWTK 244 R N T++ V +HAV V + + VN G+ + A + +W + Sbjct: 188 RLGQNSTEVTVTEHAVSVTPHTHAEPEVRVNEGQQAVYDADGKVKDVRQADTHAVLAWRR 247 Query: 245 DILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L + P+ +V+A + R+ G ++ + +A R+SGTF + +TD+ L ++ ++L + Sbjct: 248 GQLVVDNAPVADVVAEIDRHFAGRIIISNSDLAARRVSGTFTVTDTDSALALLRESLGLS 307 Query: 304 IQSITR 309 + + Sbjct: 308 VIRMGP 313 >UniRef50_A1BAQ4 Putative FecR n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAQ4_PARDP Length = 316 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 91/321 (28%), Positives = 147/321 (45%), Gaps = 13/321 (4%) Query: 1 MNPLLTDSRR---QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR 57 MN +D R A+ W L+ +V+ Q ++ W ++D ++ A+ + + Sbjct: 1 MNGQSSDGLRPGEDIEAEAAEWVIRLADPQVTDQARNAFRDWLDRDPAHRDAFDDAQRVW 60 Query: 58 NQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 +LG + A + R R ++ ++ L AG WQ + L+AD+ A G Sbjct: 61 QELGLIAQGDA----NPGRRCGRGMLA--MVALAAGFALWFWQDDLRIRLQADHVAAVGE 114 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQG 175 L DGS + L++ SA V +D +R VRL G T A Q RPF V R Sbjct: 115 NLAVTLRDGSRVELSSGSALAVDYDGTRRLVRLLEGSAYFTAEPSARQQGRPFVVEARGI 174 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 ++TALGT+F+V QD + V +H+V V S A ++ G + A P Sbjct: 175 RITALGTQFSVDLQDGDVAVLVAEHSVRVEPVSGAAPPVVLAEGMGVDARPDAIPAPAPR 234 Query: 236 DDE-STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAIL 293 + + + +W L F D+PLGEV+ L RYR+G + +AG R+SG F + + Sbjct: 235 NVDFANAWRSGELVFDDRPLGEVVRELNRYRHGRIVLRGGDLAGRRVSGVFHTDDIGRAV 294 Query: 294 NVIAQTLPVKIQSITRYWINI 314 + IA L ++ S+ + Sbjct: 295 DRIAAELGLRRLSVPPLVTVL 315 >UniRef50_B3PGL0 Probable transmembrane sensor n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PGL0_CELJU Length = 340 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 69/334 (20%), Positives = 132/334 (39%), Gaps = 28/334 (8%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR---NQ 59 P ++ +R+A+ W ++ + SP + + QW +QD ++ A+ ++ + Q Sbjct: 8 PSADNNVDAIVRAAADWCMLIHSDECSPADQVAFNQWLKQDPAHEQAYNKIRQVWGLSEQ 67 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKG---------------LLLLLGAGGGWQLWQSETG 104 L ++A + T+ + L +L G+ W Sbjct: 68 LTPTISSPWAQANTSPKTTQPLPIAAKTPYWPWQSIAWAVSLASILLVTLGYLGWTLNCV 127 Query: 105 EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLW-YGEIAITTAKDA 163 Y T + S L DG+ + +N + +R V + GE + + Sbjct: 128 PNEYHRYSTEQA-RSHVILPDGTRVEMNLNTQISYANYRDRRHVSINGNGEAFFNVSHNT 186 Query: 164 LQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 + PF++ G +T GT F V + + V + +V V + G + Sbjct: 187 -KHPFKISAANGTITVTGTAFNVWKYGKDVAVTVTEGSVIV---QNGKDTVHLTPGMKAE 242 Query: 224 FSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLS 281 ++A V D D++ +W L D+PL + I + RY + ++ D VA LR+ Sbjct: 243 YTAKYSLKVSFGDLDQALAWQSGKLILDDQPLAKAIPQIARYLDESIILTDATVANLRIG 302 Query: 282 GTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 G + +N D ++ + Q LP+ I+ R+W I Sbjct: 303 GIYNTENLDDLITALPQILPLSIKK--RFWSGIE 334 >UniRef50_B6IXY0 Sigma factor regulatory protein, FecR n=1 Tax=Rhodospirillum centenum SW RepID=B6IXY0_RHOCS Length = 331 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 95/321 (29%), Positives = 147/321 (45%), Gaps = 18/321 (5%) Query: 1 MNPLLTDSRRQA-LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL--- 56 M+P A + A+ W A L ER + ++ + W QD ++ A++++ L Sbjct: 1 MSPTPAARPTPAMVAQAAQWAATLDDERATQEEHDACEAWCRQDPLHRLAFERMRRLDRR 60 Query: 57 RNQLGGVPGDVASRALHDTRLT---------RRHVMKGLLLLLGAGGGWQLWQSETGEGL 107 QL + V A + RR + G+ LL G G W L Sbjct: 61 FEQLSELDRQVLRVAADRPGRSAVGRSAGAVRRGALLGICLLFGLG--WLAAGLPQVRAL 118 Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP 167 D RT +G +L DGS LT++T +A D+R A R + L+ G I A D +RP Sbjct: 119 FPDERTERGERRDMRLADGSGLTIDTDTALDIRLSAGMRRIELFGGRILAEVAHDP-ERP 177 Query: 168 FRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS 227 F V T G +TALGT F+VR+ T + V V A+ A + GE Q + Sbjct: 178 FTVATADGTVTALGTAFSVRRDGGRTLVTVVASRVRACPATTGAACLELGPGEQAQLAGG 237 Query: 228 EFGAVKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLRLSGTFP 285 + P+D +T+WT+ L D+PL V+ L RYR +R + + GLR++G+ P Sbjct: 238 SATRLAPVDPAGATAWTRGWLVIDDQPLTAVLEELNRYRAVPVRFEARTLQGLRVTGSLP 297 Query: 286 LKNTDAILNVIAQTLPVKIQS 306 L N+ L+ +A L +++ Sbjct: 298 LDNSGRALDALAGMLGLRLLR 318 >UniRef50_B7VA52 Probable transmembrane sensor n=5 Tax=Pseudomonas RepID=B7VA52_PSEA8 Length = 317 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 9/313 (2%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQV----ENLRNQ-LGGV 63 R + L A+ W A+L ++ +QQW + D ++ + ++ ++ R++ L G+ Sbjct: 6 RERILDEAAQWMALLQSGHAGAEERLAFQQWRQADAEHGAVFDRLSLGLQSFRDEPLHGL 65 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQ-SETGEGLRADYRTAKGTVSRQQ 122 + AL RR + + L L L + G D T G + Sbjct: 66 RAEQLIGALEAPSARRRFLQRSLALAAFGVATLALGRIGIVGFPWPGDLYTGTGQRQSFR 125 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 LEDGS L L+ +S FD ++R +RL G + + A+D RPF V T +GQ+ A GT Sbjct: 126 LEDGSQLVLDARSRVRPEFDGYRRRLRLREGRLLVDVARDP-ARPFVVDTGRGQVEAQGT 184 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 F V +++ V + V + +A ++ ++ G+S +F AS A P + ++W Sbjct: 185 RFQVSDDGASSRVVVLESRVRIT--TADGRQCLLERGQSARFDASAILARGPAEGGESAW 242 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 L D+PLGEV+ L YR G++ A LR+SG +PL ++ A L ++ Q+LP+ Sbjct: 243 LDGRLEVRDRPLGEVLEALRAYRRGIISVADDAAALRVSGIYPLDDSGAALALLEQSLPI 302 Query: 303 KIQSITRYWINIS 315 ++ YW++I+ Sbjct: 303 RLDYHGPYWVSIA 315 >UniRef50_B0KIQ3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIQ3_PSEPG Length = 317 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 109/322 (33%), Positives = 171/322 (53%), Gaps = 10/322 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ L +R +LR A+HW++ L+ V + WQ W N WAWQQ E L+ ++ Sbjct: 1 MSVHLDAEQRASLRQAAHWFSQLNSGDVQASDYSAWQLWLNATPVNSWAWQQAERLQTRM 60 Query: 61 GGVPGDVASR----ALHDTRLTRRHVMKGLLLLLGAGGGWQL-WQSETGEGLRADYRTAK 115 ++R A H +RR V+K L+LLG G ++ AD RT Sbjct: 61 AASENPASARVLALAAHGRHASRRRVVKAGLVLLGGGALSLGGYREVKQSAWLADVRTGV 120 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G L +G+ + LNT SAADV +RL GE+ +T ++ +V+TR G Sbjct: 121 GEQRSLLLNNGTAVVLNTASAADVGDLREAPWLRLRQGELMVTV---PARQTCKVVTRNG 177 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 + A + F VR ++ + L+V +V LAS Q + +G+ QF+ F +V+ + Sbjct: 178 TIEAGESRFAVRLFEDSSSLEVFAQQAQVKLAS--GQTLQLASGQRCQFNEQGFSSVEAV 235 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W + +L +D+ L IA L+RYR G LRC +VAGLR+SGT+ L +TD IL Sbjct: 236 ALAADAWGQGLLIANDQRLDTFIANLSRYRPGWLRCAQSVAGLRISGTYKLSDTDQILRA 295 Query: 296 IAQTLPVKIQSITRYWINISPL 317 +A +LPV++Q+ TRYW+ ++ + Sbjct: 296 LATSLPVQVQARTRYWVTVTAV 317 >UniRef50_UPI0001AF4CF8 FecR protein superfamily protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF4CF8 Length = 346 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 128/332 (38%), Gaps = 33/332 (9%) Query: 2 NPLLTDSRRQAL-RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR--- 57 +PL + + A+ +A+HW L + + + + QW + +Q + + Sbjct: 3 DPLFSKAEHDAITDAAAHWCMRLHADDCTDAERKAFDQWLVAHPLHAVEYQAMNEVWYIT 62 Query: 58 --------NQLGGVPGDVASRALHDTRLTRRH----------VMKGLLLLLGAGGGWQLW 99 + + A + + +R R+ V+ + + G +Q W Sbjct: 63 GQIEPLNPAPIASIGSAQAGQPVSRSRQHRKQRWTQRAAAAAVIALAVPVASYVGWYQGW 122 Query: 100 QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITT 159 ++ E A T L DGS LN + ++R V L GE Sbjct: 123 LPDSYESYNASAAT-----RLVVLADGSRAELNLGTELTYANYRNRRAVTLKSGEAFFEV 177 Query: 160 AKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEV-LLASAPAQKRIVNA 218 + D PF V QG + GT F V + ++ + + +V+V + PA ++ Sbjct: 178 SHDTTH-PFVVDAGQGSIAVTGTRFNVWMYQDQVRVTLVEGSVQVNSDRTHPASSHHLDP 236 Query: 219 GESLQFSASEFGAV---KPLDDESTSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPA 274 G + A + + P D S +W L F+D PL + + + RY + +L D A Sbjct: 237 GMQASYKAGDDTPLISQTPAQDASLAWRNGKLIFNDLPLSQALPLINRYLQTPILLADSA 296 Query: 275 VAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 +RL G++ + +L+ + + LP+ + Sbjct: 297 TGAMRLGGSYNTDDLSYLLSSLPKVLPLYVTR 328 >UniRef50_C5BRF0 Transmembrane sensor n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRF0_TERTT Length = 345 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 85/329 (25%), Positives = 147/329 (44%), Gaps = 30/329 (9%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 SR + A+ W + + +S + ++W Q Q ++ ++ + ++ +L G+ + Sbjct: 8 KSREHIEQEAAAWVIKIDQKPLSASERDELERWLAQSQAHRRSFLALADVWQELDGLTSE 67 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLW----QSETGEGLRADYRTAKGTVSRQQ 122 + R +++ + L+ ++ + A+Y+TA G + + Sbjct: 68 SEAVTQQAARPSQKQMPIVWSAAAAVLLAIALFTFHLRTANVPDIHAEYQTATGEIEQYL 127 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 L DGS + LNT+S V F AH+R + L GE AKD +RPF V T +G +TA+GT Sbjct: 128 LPDGSRIKLNTRSNVVVDFSAHERAIHLQEGEANFEVAKDP-KRPFVVYTNRGSITAVGT 186 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLAS---------------------APAQKRIVNAGES 221 F VR Q + L V + V+V AS + Q V+AGE Sbjct: 187 AFNVRVQSSGIDLVVTEGKVKVDAASSVLEPVRYDDKPSTRTELPDRSAQQIVAVSAGEK 246 Query: 222 LQFSASEFGAVKPLDDE---STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAG 277 L+F + P E SW + +L+F PL E + ++RY + ++ DPA+A Sbjct: 247 LRFGNTTQHHTNPSQQEIDRQLSWQQGMLAFDSTPLAEAVREISRYTDTHIIIEDPALAE 306 Query: 278 LRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 L + G F DA+L V+ + + + Sbjct: 307 LPVGGYFKAGEVDAMLEVLELSFNLSAEH 335 >UniRef50_Q1YUD9 Sigma factor regulatory protein, FecR/PupR family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD9_9GAMM Length = 343 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 131/342 (38%), Gaps = 29/342 (8%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + Q + A+ W+ ++ VS Q W + D+ A++Q+E L L Sbjct: 1 MSEIYMQFSDQVNQQAAEWFTLMQSGDVSASDREALQAWLAEHSDHDKAFKQMELLWQDL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMK---------------------GLLLLLGAGGGWQLW 99 G V RAL + + + + L + L Sbjct: 61 GDVADTAEGRALRQSVESESIAARLQQLLMAPLINLKNIFSVPTYAMALAVVCIAVGALM 120 Query: 100 QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITT 159 E + Y T G + L D S +TL +SA RTV L GE Sbjct: 121 LPIAKEPVTVYYSTQHGEIKTIVLADNSEITLGAKSAIRTHISESDRTVELLNGEAFFDI 180 Query: 160 AKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA----QKRI 215 AKD Q+PF V + +GT+F V++ + + V + V+V +A + Sbjct: 181 AKD-RQKPFSVAVNDVLIEVVGTQFNVQKIRDAVNVAVLEGIVKVFEQAASQTVSLPDVV 239 Query: 216 VNAGESLQFSASEF--GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCD 272 + AG+ + S + +W L + D L +++A RY +G ++ Sbjct: 240 LTAGQKVVKSNDRAFESVTAVSSSDLGAWRLGRLIYRDISLADIVADAGRYFDGKIILQS 299 Query: 273 PAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 + ++++ T + ++AQTLP+K+Q I+ I + Sbjct: 300 DDLDEVKVTMTLRTDQVGQLPEMLAQTLPLKVQVISEKLILL 341 >UniRef50_C6X944 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X944_METSD Length = 330 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 101/307 (32%), Positives = 144/307 (46%), Gaps = 10/307 (3%) Query: 11 QALRSASHWYAVLS---GERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 + + A+ W LS + +A Q W +Q + ++Q++ L L D Sbjct: 21 EIRQQAAEWLIQLSEAESDTQRAALQAACQAWQQQHPGHAEIFRQMQTLWQSL----ADH 76 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 A RR + G L A Q T AD RT+ G + + L DGS Sbjct: 77 GDTAKPKRSKGRRKALIG--TALSALLLLGGLQLPTTRYWLADERTSTGEIRQISLSDGS 134 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 +TLNT SA D+RFDAH RT+RL GE+ A D QRPF V R G TALGT + VR Sbjct: 135 RITLNTHSAVDIRFDAHTRTIRLTEGEVLAEVAHDPQQRPFIVENRDGTATALGTRYLVR 194 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 Q + + + V + V V + + V AGE L+F A + + P + SW L Sbjct: 195 QDADSSTVTVLESTVAVKPRHSATISK-VYAGEQLRFDAQQAYTLMPAPALADSWHMQRL 253 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 F D PL VIA L YR G+L+ R +G P ++D L+++ Q LP++IQ Sbjct: 254 VFEDAPLSAVIARLAEYRPGLLKLRTNTQAFRFTGVLPTDDSDKALSILQQALPIRIQRF 313 Query: 308 TRYWINI 314 + Y + + Sbjct: 314 SNYIVLV 320 >UniRef50_Q21KS4 FecR protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KS4_SACD2 Length = 320 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 8/307 (2%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDT 75 A W L+ + V + EA + W + +Q A+ + E L + + + A Sbjct: 14 AIEWLVKLNRDTVPSELEAEFMAWLQSSPAHQAAYIRAEQLWQRGEALQKLAQTTAQQPV 73 Query: 76 RLTRRHVMKGLLLLLGAGGGWQ-LWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQ 134 + +GL +W + + ++TAKG L DGS + LNT Sbjct: 74 KANFYFGWQGLSACAAILIVCLCVWLLPSAQQEILHFQTAKGQQLHIDLNDGSKVLLNTS 133 Query: 135 SAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQ 194 SA DV + + QRTV L GE AKD +RPF V T QG + +GT F V+ + T Sbjct: 134 SALDVAYTSSQRTVSLLQGEAFFDVAKDT-KRPFDVETHQGTVRVVGTRFAVQHTELDTV 192 Query: 195 LDVQQHAVEVLLASAPA---QKRIVNAGESLQFSASEFG-AVKPLDDES-TSWTKDILSF 249 + V + V + S + Q ++ + F+ ++ G K +D E SW K L F Sbjct: 193 ITVLEGKVALGDKSDSSIFEQAVLLTPNQQTTFAETKLGLKPKVIDAEKNLSWRKQHLVF 252 Query: 250 SDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 +PL +V+ L RY + V+ D ++A ++ L + L + + Sbjct: 253 RGQPLRDVVEELNRYSSTVIVLGDASLANKNVTAVIQLGEKGVTAETLGSALQLNVTKDN 312 Query: 309 RYWINIS 315 + +S Sbjct: 313 SGRVVLS 319 >UniRef50_B7UW19 Probable transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=B7UW19_PSEA8 Length = 327 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 84/320 (26%), Positives = 136/320 (42%), Gaps = 8/320 (2%) Query: 1 MNPLLTDSRRQALR-SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 + PL D + + A++W++ S A + W D ++ A + +E L + Sbjct: 7 LEPLFADETEEDIDHRAAYWFSRRRSGHFSAACRAELEDWLRADPRHREALEGMERLWRE 66 Query: 60 LGGVPGDVASRALHDTRLTR--RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 G+P R R + + W+ ++ A Y TA G Sbjct: 67 FDGLPRPALDDIPEPVPAWRLPRALAAAFFVFCALLVATLFWRDQSLGPNLA-YGTAPGE 125 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 L DGS L L+ + VR+ R V L GE+ + D RPFRV + ++ Sbjct: 126 QREVVLADGSKLFLDVDTQVQVRYAERTRDVLLKKGEVFFVVSHDP-ARPFRVGSGDSRV 184 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS--ASEFGAVKPL 235 T LGT+F+VR+ + V+Q V + + + ++ AG+S + Sbjct: 185 TVLGTQFSVRRNAQALAVAVKQGRVALQPSLEKDAEHVLLAGDSARLDLADQRLELGHVA 244 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILN 294 ++ SW L F DKPLGE++ L+RYR +R DP +AG R+SGT + D L Sbjct: 245 PEQVASWRDGQLVFRDKPLGELVEELSRYRAAPIRLGDPRLAGKRVSGTVRIARPDDFLL 304 Query: 295 VIAQTLPVKIQSITRYWINI 314 + LPV++Q + I Sbjct: 305 ALPALLPVRVQPQAGGEVLI 324 >UniRef50_B6YYD9 FecR protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYD9_9RHOB Length = 333 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 131/308 (42%), Gaps = 12/308 (3%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ--LGGVPGD 66 A +W+ L E S +Q ++ W+ + +Q + ++E + G+ Sbjct: 21 PDPIADEALNWFLKLQ-EDTSDEQRKQFSAWFNTSEQHQQEFARLEEIWGASAFRKAVGE 79 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLW-----QSETGEGLRADYRTAKGTVSRQ 121 + + + H T+ H K L G + L S+ L+ADY T + + Sbjct: 80 LKTVSAHPP-ATKTHPQKTFRKLTGVAAAFALMIGATQFSDWWIYLQADYTTQSAEMRQI 138 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 L DGS + +N+++A + F+ QR V + GE DA QRPF+V G++T LG Sbjct: 139 SLPDGSSMLMNSETAVALDFEGSQRHVHILRGEAYFDVLHDA-QRPFQVTGGFGEVTVLG 197 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-EST 240 T F+V ++ +++ VE+ A+ R + GE + S K ++ E Sbjct: 198 TAFSVLASRTEDRVVLERGRVELTRANDAETARELKPGELSRISKIGIEESKKINPAEVL 257 Query: 241 SWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W + L D PL + + + RY + + A+ +R+SG F N + +A Sbjct: 258 AWREGRLVLEDVPLSKAVEEIERYYSSSIFITSSALRDIRVSGYFKTDNLIEAIETLALA 317 Query: 300 LPVKIQSI 307 + + Sbjct: 318 TGADLYQL 325 >UniRef50_B9K518 Two component sensor kinase n=1 Tax=Agrobacterium vitis S4 RepID=B9K518_AGRVS Length = 319 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 9/316 (2%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 +DSR++ R A+ W SP A ++ W ++D +N + E + G Sbjct: 7 SDSRKRRNREAADWLLRNGDPNQSPDDRALFETWLKRDPENCRTYSAAEFVMGDAG--RA 64 Query: 66 DVASRALHDTRLTRRHVMKGLL--LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 + L D + R++ K ++ LL+ A + + ++AD + L Sbjct: 65 IQSDPGLADIDMRPRNMAKPIIATLLVAALATGAFFAFDGPLRMQADMIAGTDETPIRTL 124 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 EDGS++ LN SA V F R +RL G+ A A RPF V+ + ++ ALGT Sbjct: 125 EDGSIVQLNASSAIAVDFTGGHRVIRLLRGQAFFQVAH-APDRPFTVVAGETKVIALGTA 183 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS-ASEFGAVKPLDDE-STS 241 F VR T++ V ++AV++ A VN GE + A + AV P+D + + Sbjct: 184 FDVRYGKEDTEVTVTENAVQLERDGKQAASLRVNEGEQAIYDYARKTTAVTPVDGLVALA 243 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W + ++ + PL V+ + R+ G ++ A+A R+SGT + +T L + + L Sbjct: 244 WRRGQIAVDNAPLSYVVEEMNRHFRGRIIIAGSALARRRVSGTIKVADTKDALAFVKKAL 303 Query: 301 PVKIQSITRYWINISP 316 ++ + I I P Sbjct: 304 GLEATRLGP-LIVIHP 318 >UniRef50_Q92NX5 Putative iron transport regulator transmembrane protein n=1 Tax=Sinorhizobium meliloti RepID=Q92NX5_RHIME Length = 354 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 131/321 (40%), Gaps = 9/321 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M P D+ + + A+ W + P+ +++W +D++ W++ L + Sbjct: 35 MTP--DDNAAELSKEATDWLIRIREAPDDPEMRLHFERWVTTSRDHRREWEKTCRLWLSV 92 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQL--WQSETGEGLRADYRTAKGTV 118 G +P + H+ + RR L + A L W L++DY T Sbjct: 93 GALPAARDKPSAHNFKPGRRGGRASLAIAACAMAICLLVAWVPGLLIVLQSDYHTGTAET 152 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +LEDGS +TL SA + F +R++RL GE A D RPF V ++ Sbjct: 153 RSLELEDGSTVTLAPGSAIAMDFGQSRRSLRLLQGEAYFDVAHDP-ARPFVVDAGGLEIE 211 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA-QKRIVNAGESLQFSASEFGAVKPLDD 237 LGT F V T++ +++ V + A +R + G++L F D Sbjct: 212 VLGTAFDVMVDSESTRVSLERGLVTASPSGKEASAERRLTPGKALVFDRDAQDMTTSDID 271 Query: 238 EST--SWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILN 294 ++ +W + L + + V+ + RY + DP + R++G + L D L Sbjct: 272 AASIGAWRQGRLHVVNATISSVVERIQRYHPAWISLPDPVLGSQRVTGIYDLTAPDEALG 331 Query: 295 VIAQTLPVKIQSITRYWINIS 315 + K++ I+ + IS Sbjct: 332 ALVDPYGGKVRRISSFARVIS 352 >UniRef50_A4Y0Z0 Putative FecR n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0Z0_PSEMY Length = 338 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 84/320 (26%), Positives = 130/320 (40%), Gaps = 18/320 (5%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ-- 59 P T L A W +L + +AR+ QW N A+ + + Sbjct: 26 QPAPTPDSDTPLEQALDWLILL--DDADEACQARFAQWLAASPANAEAFARAQRCWQSPA 83 Query: 60 LGGVPGDVASRALHDTRLTRR-----HVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTA 114 L + R + RR LLL++G S+ LRAD+ TA Sbjct: 84 LVSAAARLEQRRQPTPKRARRLGPGLAFAASLLLVVGITL-----HSDLLLRLRADHVTA 138 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G QL DGS + LNT SA R D QR +L GE AKD+ RPF V Sbjct: 139 VGQRQSLQLADGSRVLLNTDSAFTSRIDERQRVTQLLRGEAYFDVAKDS-SRPFEVSAGP 197 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG-AVK 233 +++ GT F VR + ++ V+ +EV A + + G+S++ G + Sbjct: 198 VRVSVRGTAFAVRYLGDAAEVSVEHGEIEVH-ARGNDTRIHLRGGDSIRVGPDGVGQRTR 256 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAI 292 +W + L F D+PL EV+ L RY G ++ + + LR++G + L +I Sbjct: 257 ASSASQLAWVQGRLVFDDRPLHEVLDELRRYYPGWIINGNARLNDLRITGNYRLSEPASI 316 Query: 293 LNVIAQTLPVKIQSITRYWI 312 + +AQ ++ I Sbjct: 317 MRSLAQVTSAQLHEYPALLI 336 >UniRef50_A9CLD9 Transmembrane sensor n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CLD9_AGRT5 Length = 311 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 14/306 (4%) Query: 5 LTDSRRQALR-SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + D +ALR A+ W ++ + + +W + ++ A+QQ L LG Sbjct: 1 MLDENFEALRREATAWIVRITSGTATTEDAEALLRWRSRSDAHEQAFQQSARLWKNLGSA 60 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQ----LWQSETGEGLRADYRTAKGTVS 119 G+ +R + +TRR + + GA G L + + + ADY T G Sbjct: 61 LGE--TRKTSASTVTRRSFIAAGSVAAGAAGVGVVLSELGFLPSVDAMLADYATGVGEQR 118 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 +L DGS L+ + + + R + L G DA RPF V G TA Sbjct: 119 TVELVDGSTAILDGGTTLSLDYSPSSRHLVLTSGAAVFDVVHDA-ARPFVVTAANGDTTA 177 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE- 238 GT F+V+ + ++ + + V +N GE + +S + G D E Sbjct: 178 TGTSFSVKHGEEDVSIECLEGHITVQCLGDSQ----LNGGEGISYSRAGLGKKVAADIET 233 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W + +L F D+PL +V++ L R+R G V+ + R+SG F L D IL + Sbjct: 234 AAAWRRGLLIFEDRPLADVVSDLNRHRRGRVVIASSDLRSRRMSGVFHLNRPDEILAHLE 293 Query: 298 QTLPVK 303 +TL V+ Sbjct: 294 ETLQVR 299 >UniRef50_Q82WV2 Possible transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82WV2_NITEU Length = 309 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 20/300 (6%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 A+ W+ + + ++ ++ W +++ ++ +QQ L L + Sbjct: 12 EENALTEQAAAWFLRMQQSDTNDVEQKAFEAWLAENEAHRTEYQQYVQLWQTLDHLE--- 68 Query: 68 ASRALHDTRLTRRHVMKGL--LLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 R R + + L +L + W E TA G + L D Sbjct: 69 -----QKPRKKSRSTVTWIVTLAILFSSLHWLTRHEEM-------ITTAIGEHQQIILAD 116 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 G+ + +NT S + R V L GE D R F V G L +GTEF Sbjct: 117 GTTIDINTDSTLRLALYGFTRKVTLERGEALFRIG-DERLRSFEVHAGNGILRDIGTEFN 175 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWTK 244 V +++ + V + AVEV + R+++ GE L +SA + + D + T+W K Sbjct: 176 VIKEEGNVTVAVLEGAVEVGIDHQNDTVRLLHGGEQLTYSAYDLSEISSTDKETVTAWRK 235 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L F + PL EVI + RY + +R DP + LR+SG F + ++ + LP++ Sbjct: 236 SRLIFRETPLEEVIRQINRYHSRPVRLGDPQLNTLRVSGEFNSADRAGLVQALITLLPLR 295 >UniRef50_A5VYP7 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas putida RepID=A5VYP7_PSEP1 Length = 323 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 14/320 (4%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV- 67 + + A+ W L + + + W + D + ++++ + +Q+ + Sbjct: 3 PSRIEQEAAEWALCLGEGELDADETREFDAWLQADPRHGATLRRMQGVISQVQALREQRG 62 Query: 68 -------ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 A + + R + GL L + G L T AD TA Sbjct: 63 PVGAGLRAGAQVSASGSGARRTLLGLALAISLLGTLSL-SGGTPRDWLADLHTAPAEWRS 121 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 Q LEDGS LTL SA DV F +R +RL +G++ + + D RPF + T +G AL Sbjct: 122 QTLEDGSQLTLAGNSAVDVEFSTGERRIRLLHGQVLVDVSHDPT-RPFVIQTEEGSFKAL 180 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F V + ++L + + VE A + Q +V GE + G + +D Sbjct: 181 GTRFVVSEGHARSELTMLESRVEARTAVSGDQ-LVVGPGERAWVARDGLGPLPAIDPARV 239 Query: 241 --SWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVIA 297 +W L PL +V+ L R GVLR D A+ +++S PL +++ L ++A Sbjct: 240 DRAWQHHQLVADGVPLDQVLDALAEQRRGVLRFDRQAMQAIKVSAVLPLDDSERALRLLA 299 Query: 298 QTLPVKIQSITRYWINISPL 317 + LP++I + R+W + P+ Sbjct: 300 EALPIRIGGVGRWWTTVEPV 319 >UniRef50_Q2KUB5 Heme uptake transmembrane sensor n=2 Tax=Bordetella avium RepID=Q2KUB5_BORA1 Length = 307 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 91/307 (29%), Positives = 138/307 (44%), Gaps = 13/307 (4%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 R+ R A+ W L+ + S A ++W D ++ AWQ + + + LGG+P + Sbjct: 9 RRVAREAARWLMHLASGQASADDAAACERWRASDTRHEQAWQHAQRVNDLLGGLPPQLLH 68 Query: 70 RAL-HDTRLTRRHVMKGLL-LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 L TRR +K + + LG W W+ GL ADYR+A G L G+ Sbjct: 69 ATLGRPAHKTRRLALKAMAGMALGTPAAWAAWRGGRETGLLADYRSAPGERRDIVLPGGT 128 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 ++LN+ SA D+ D L GE+ + + QGQ+TA + +R Sbjct: 129 FVSLNSGSALDLSDDGA----VLRAGEVYVRAGLRCVAH-----APQGQVTASHARYALR 179 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 +++V + V+V A A + F A + +W + +L Sbjct: 180 LDAEGCRIEVYEGQVQVRPALGVAATLAAPQ--AACFDAYTVRLRSAALESEPAWLRGVL 237 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 + PL A L RYR G++RC AVA L +SGTF L NT+ IL + LPV ++S Sbjct: 238 HVNAMPLAAFAAELGRYRRGLVRCAQAVAALPVSGTFQLDNTEGILRALPALLPVSVRSR 297 Query: 308 TRYWINI 314 T YWI I Sbjct: 298 TPYWIVI 304 >UniRef50_Q7WEI1 Heme uptake transmembrane sensor n=2 Tax=Bordetella RepID=Q7WEI1_BORBR Length = 305 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 130/304 (42%), Gaps = 9/304 (2%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R A+ W L + S + W +++ AWQ+ L + +P V AL Sbjct: 3 REAARWLVRLGSGQASADEIQACDHWRASHAEHERAWQRARRLTSMFDRIPPAVGQAALG 62 Query: 74 DTRLTRRHVMKGLL-LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLN 132 R RR ++K L+ +L W + G AD RT G L G+ L LN Sbjct: 63 RAR-DRRAMLKSLVAMLAAPPAAWAALRGARNSGWLADLRTGTGETRTVALGPGTQLRLN 121 Query: 133 TQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF 192 T +A + + ++RL GEI + RP RVLTR G + +RQ D Sbjct: 122 TGTAVSLDDGSGMLSLRLHRGEIYLE-----ADRPCRVLTRGGMIRTEAAHLWLRQDDAD 176 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDK 252 L V A + V AG+ + + D S W + +L Sbjct: 177 GLLGVVAGL--AFWQGADNRTHSVAAGQRIAWHDGALQGAAQTLDGSPDWLRGVLRADAM 234 Query: 253 PLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWI 312 L + L+RYR G LRCDP VAGLRLSG F L +TD IL + LPV++ +T YWI Sbjct: 235 RLDHFLRELSRYRPGTLRCDPRVAGLRLSGVFQLAHTDDILRALPALLPVQLSYVTPYWI 294 Query: 313 NISP 316 + P Sbjct: 295 TVGP 298 >UniRef50_Q3SUW8 FecR protein n=3 Tax=Rhizobiales RepID=Q3SUW8_NITWN Length = 337 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 69/321 (21%), Positives = 121/321 (37%), Gaps = 15/321 (4%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 + A W A + ++ ++Q+W + + ++ +E + Sbjct: 18 PDPIVDEALEWLARRQNAPLELAEQRQFQEWLLRSPRHGEEFRYLEAMWRSPELGKAAEG 77 Query: 69 SRALHDTRLTRRHVM-----------KGLLLLLGAGGGWQLWQSETGE-GLRADYRTAKG 116 A + RR ++ +G+ WQ +ADY TA G Sbjct: 78 LPAAARGSVNRRRLLSAARYVQSWSLRGVAAAAILMIAIGAWQYPALMLRWQADYITATG 137 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 ++ L DGS + LNT SA + F +R V L GE D PFRV G+ Sbjct: 138 GRAQVSLPDGSTMLLNTASAVSIDFTNGRRQVTLLEGEAFFDVRHDPAH-PFRVAAHYGE 196 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 GT F VR + + + +++ VEV S ++ GE + +A V D Sbjct: 197 TEVKGTAFAVRTESDQDTIVLERGRVEVSRLSDSGDHVELDPGEMVTATAKALSVVARRD 256 Query: 237 D-ESTSWTKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTFPLKNTDAILN 294 E +W + F ++ L V+ L RY +G+ + D V L ++G + L + + Sbjct: 257 PSEILAWRDGRIIFENQRLAHVLDELRRYYDGIVIVADARVGDLVVTGNYRLDDVPGAIR 316 Query: 295 VIAQTLPVKIQSITRYWINIS 315 +A + + I + Sbjct: 317 TLADAAGATMNRLPGGIILLR 337 >UniRef50_C7JHQ2 Two component sensor histidine kinase FecR/PupR n=8 Tax=Acetobacter pasteurianus RepID=C7JHQ2_ACEP3 Length = 341 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 84/325 (25%), Positives = 130/325 (40%), Gaps = 11/325 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M + R+QA R A+ W +L E P+ A ++ W N+ AW Q + + Sbjct: 18 MTVIDDPVRQQASREATQWLILLQEEPDDPEVRAGFEAWLGAAPVNREAWAQTQTAMGLV 77 Query: 61 GGVPGDVAS----------RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRAD 110 + D R + R G L L A + ++AD Sbjct: 78 NYLSPDNTGNWQQKKRNIVPLPLRHRFSSRATRAGFALALVACLALFFAGPDFMLHMQAD 137 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 T L DGS +TL SA + R+V L GE + D RPF V Sbjct: 138 AITGTAETRVLSLSDGSSITLAPGSAVSINTQGIHRSVSLLAGEALFSIVHDP-ARPFAV 196 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 T +GT F V+ + V+ V V + PAQ R + G++L SA+E Sbjct: 197 KAGGFTTTDIGTVFDVQWAQGAVNVAVRTGRVRVNGGAIPAQGRELGTGQALTASATEVY 256 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTD 290 ++ +W +L +D+PLGEV+A L Y +G++ P +A R+SG + L N Sbjct: 257 NNNLPAEQVGAWADGLLVANDEPLGEVVAKLKPYLHGMVIVSPHLALQRVSGVYSLSNPA 316 Query: 291 AILNVIAQTLPVKIQSITRYWINIS 315 L IAQ ++ + + + Sbjct: 317 RALEAIAQARQRTVRRYSPWLTVLR 341 >UniRef50_B7S234 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S234_9GAMM Length = 322 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 9/320 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN Q +A +W A L + VS + W + ++ A + + L + L Sbjct: 1 MNEETNKQYEQVCEAALNWVACLRSDAVSEGDRQAFALWLGKHNSHRRAMDEAQALWDDL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 V + + R + ++ LW + + YR+A G Sbjct: 61 AVVRHIPVN--IDKAANRSRWLATAMVAAACLVLAVFLWPQLPSDPVSTQYRSAMGERRT 118 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS++ LNT S V + QR V L GE+ + + QRPF V + ++TA+ Sbjct: 119 VDLPDGSVIHLNTNSTISVTYTDDQRHVDLERGEVWFQVSPNK-QRPFHVDAGEARITAV 177 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKR----IVNAGESLQFSASEFGAVKPLD 236 GT F + DN T + V + VEV ++ ++ + L + D Sbjct: 178 GTAFNIYLDDNSTDVTVTEGVVEVSDIGQTGRRLHAAELLLENQRLITGIDGWELSSSDD 237 Query: 237 -DESTSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 + +W + L + PL +I L RY + ++ DP VA L +SG L +A L+ Sbjct: 238 VSKQMAWQRGELVAEEMPLPALIEQLERYQQTRIIIADPNVAALTVSGVLQLDQPEASLS 297 Query: 295 VIAQTLPVKIQSITRYWINI 314 IA +L ++I ++ + + Sbjct: 298 AIAVSLDLQITPLSDTSVLL 317 >UniRef50_D2LKP6 Anti-FecI sigma factor, FecR n=2 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKP6_RHOVA Length = 326 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 91/328 (27%), Positives = 135/328 (41%), Gaps = 32/328 (9%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD--- 66 A W+ L + + R+ W + D + AW ++E L + L V Sbjct: 7 HSVEDDAVEWFV-LRDASATDEDRERFLAWRDADPVHARAWGEIERLWSNLDHVSPQSLG 65 Query: 67 ------------VASRALHDTRLTRRHV-----MKGLLLLLGAGGGWQLWQSETGEGLRA 109 + S + RR + + G L+L A W A Sbjct: 66 LRRPGRENVSLLMPSHTPPPHVVGRRALSFGSRVSGAALVLCALLIWAWMPHSF-----A 120 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 DYR+ G L+D S + L + +A DV F R VRL GE T AKDA RPF Sbjct: 121 DYRSGIGERRTVLLDDHSEIELGSATAIDVAFSPTHREVRLLEGEAFFTVAKDA-ARPFI 179 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V T QG++ GT F V+ D + V +H+V V SA V G+ ++F Sbjct: 180 VATAQGEIEVRGTAFNVKITD-AVAVAVAEHSVSVT--SAGGNTASVQQGKMVRFDQKAV 236 Query: 230 GAVKPLDDEST-SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVA-GLRLSGTFPLK 287 D ++ +W +D L F D PL V+A L RYR G + AVA R++ F Sbjct: 237 SPASNADLDAIQAWRRDQLVFIDTPLEAVLADLRRYRVGRIDLLSAVAGQKRITAVFEKN 296 Query: 288 NTDAILNVIAQTLPVKIQSITRYWINIS 315 D L+ IA++L +++ T + + Sbjct: 297 RIDDALDTIAESLDLRVIRATSLFTALV 324 >UniRef50_Q7M8T7 PUTATIVE TRANSMEMBRANE SENSOR n=1 Tax=Wolinella succinogenes RepID=Q7M8T7_WOLSU Length = 320 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 73/304 (24%), Positives = 136/304 (44%), Gaps = 11/304 (3%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP--GDVAS 69 A+ W+ + + Q+ ++ W + ++Q A ++++ L +P A+ Sbjct: 5 IREEAATWWVRCNEG-LDEAQKVDFEAWLGESPEHQAALERMKRTWRALDSLPLKNRAAN 63 Query: 70 RALHDTRLTRRHVMKGLLLLLGAG--GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 ++T RR KG+++ + A L E Y T +G + +L DGS Sbjct: 64 NPQYETPKNRRAWQKGIVVAMFACMLLVAGLQWREGQPSFEGHYATQRGELREVELPDGS 123 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 L L+T S VRF ++R VRL G+ A +K A +RPFRVL + +GT+F VR Sbjct: 124 HLVLDTASRVWVRFYKNRREVRLEEGQAAFEVSKSA-KRPFRVLAGDLAVEVVGTKFGVR 182 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRI---VNAGESLQF-SASEFGAVKPLDDESTSWT 243 + V++ V V + + R ++ GE ++ + L + + Sbjct: 183 HLKEGVSVAVEEGRVRVGQRFSEDEYRFFEELSGGEGVRIKGDGGIIKREGLFLGTIPFL 242 Query: 244 KDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 L F + L E I RY G++ D +R++G+F ++ D+ + + + +PV Sbjct: 243 AGRLEFDEVTLQEAIDEFARYGETGIVLEDEGAKRMRITGSFEIRRLDSFVRALPKIIPV 302 Query: 303 KIQS 306 +++S Sbjct: 303 RVRS 306 >UniRef50_B0KMC5 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KMC5_PSEPG Length = 332 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 151/312 (48%), Gaps = 13/312 (4%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP----GDVAS 69 A W+ + +A + W + ++ AW++ L QL + D+A Sbjct: 20 EEAMEWWLDMQEANFDSSAQAAFVAWRSEHPLHELAWEKALALGEQLDSLRTRGDPDLAR 79 Query: 70 RAL---HDTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLED 125 RAL +L+RR +KGL LLL A G W SE L ADY T G R L Sbjct: 80 RALLLPSQEKLSRRRAIKGLALLLAASAGAWMSRDSEMVSRLSADYTTGVGEQRRVALAS 139 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 L LNT SA + R H+ +RL GE+ I A + + T Q + A FT Sbjct: 140 DLSLELNTHSAINARATGHRWHLRLLSGEVLIDAALNPA---LYIDTAQVRTQASSARFT 196 Query: 186 VRQQDNF-TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 +RQ DN TQL V + +++V A + AG+ +F + S +W + Sbjct: 197 IRQLDNGSTQLAVYRGSLQVTPTQA-GTWTALQAGQLARFGPLGVLDQGVMQASSPAWAE 255 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 ++ + +PL + L RYR+G L CD A+A LR+ GT+PL ++D +++ +AQTL +++ Sbjct: 256 GMIVANGQPLQAFLDELGRYRHGYLGCDAALANLRVWGTYPLADSDRVIDAVAQTLQLEV 315 Query: 305 QSITRYWINISP 316 Q TR WIN+ P Sbjct: 316 QRFTRLWINLRP 327 >UniRef50_C6DD79 Anti-FecI sigma factor, FecR n=5 Tax=Pectobacterium RepID=C6DD79_PECCP Length = 317 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 84/314 (26%), Positives = 132/314 (42%), Gaps = 15/314 (4%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + D + + A+ W L+ + +QE +Q W QD ++ A +Q L + LG + Sbjct: 1 MNDYPPEIQQQAARWAIRLAEAPLDDEQELAFQHWLAQDPRHRHALEQAGMLWHGLGSLS 60 Query: 65 GDVASRALHDT-------RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 + R+ R K LLL W S+ LR+DY A Sbjct: 61 AEQRQVLQPQPPATFLIKRVNRATQWKIAALLLLGFSVGTTWISDGILMLRSDYH-AVHQ 119 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQG 175 V L DGS + ++ SA + + +R V L G T A Q RPF V G Sbjct: 120 VKHVTLPDGSEVDMDAGSAISLAYTPQERRVTLLQGSAWFTVAPTTTQEKRPFLVDAASG 179 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 ALGT+F V+ T + V +H+V+V A Q ++ ++ +++ + Sbjct: 180 TTQALGTQFIVQNASQTTTVGVVEHSVQVT---ANGQSLQLDEQQAARYTEQGMTRLPGW 236 Query: 236 DD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAIL 293 + E W + +L F +PL VIA + +YR G + A+ ++SG F L D L Sbjct: 237 NSRERGDWRRGLLIFDQQPLAVVIARINQYRAGTIVIPTSALRQRQVSGIFSLNELDGAL 296 Query: 294 NVIAQTLPVKIQSI 307 IA L K S+ Sbjct: 297 QTIATELGAKTVSL 310 >UniRef50_Q3SQY3 Probable FecR, iron siderophore sensor protein n=3 Tax=Rhizobiales RepID=Q3SQY3_NITWN Length = 329 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 9/299 (3%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG--GVPGDVASRA 71 +A W L + + A + W Q +++ A ++ E + + +G G R Sbjct: 28 DAAIDWLVRLKSGQATNDDHAAFAAWRGQSMEHELAAREAEAVWHGVGVAGDRARTLERK 87 Query: 72 LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTL 131 ++TRR V+ G L + G G AD+ T G L DGS + L Sbjct: 88 ERRAKVTRRAVLGGGTLAVA--GFVLAGSGVIGPRAFADHVTGVGEQRTVGLADGSSVFL 145 Query: 132 NTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDN 191 N S V+F AH+R + L G+ T A D RPF V GQ A+GT F + + Sbjct: 146 NASSGFSVKFSAHERRLSLLEGQATFTVAHDT-ARPFIVEAGDGQTRAVGTVFDIDIRAG 204 Query: 192 FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES--TSWTKDILSF 249 + V + V + +P + + +++ + D T+W + L F Sbjct: 205 EVVVTVVEGVVAITTDQSPD-PVVARVDQRVRYLPRGRPSGPESADAYIETAWRRGKLIF 263 Query: 250 SDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 + +PL +V+A + RYR G ++ + L ++G F L + +AIL+ I TLPV++ + Sbjct: 264 NRRPLADVVADIERYRRGRIVLMGDGLRSLEVTGVFDLNDPEAILHTIEDTLPVQMTRL 322 >UniRef50_B8KN81 CytoChrome c oxidase Cbb3-type, subunit I n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KN81_9GAMM Length = 332 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 75/329 (22%), Positives = 138/329 (41%), Gaps = 16/329 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M R + A W A G SP +++W + ++ A +++ +L +L Sbjct: 1 MAEPAVHGRSDIDKEACAWIAQFDGGEPSPADLEAFREWVNRSPRHREAIERLSSLWGEL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRAD--YRTAKGTV 118 + + R R + + +L L +AD Y TA G Sbjct: 61 NDLTLLAVPPPVKTRRAWRSLGLGAVAAVLVLAVAATLRLPFGEPASQADGVYATAVGEK 120 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 L DGS + LNT + V + +R + L GE A D QR F V + + Sbjct: 121 QTIVLPDGSTIQLNTATRLRVSYSPQRRELFLLAGEAFFDVAHDP-QRAFLVNAGERTVR 179 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLA----SAPAQKRIVNA---GESLQFSA-SEFG 230 A+GT F++ + + ++ V + VE+ +A R++ G+ ++ + +E Sbjct: 180 AVGTAFSIHRDSDVLEVLVTEGVVELSRGAEGTTAHDTSRVLGKVLRGQRVRLAREAEPS 239 Query: 231 AVKPLDDE----STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFP 285 A + + DE +W + +LSFS +PL V+ + RY N + D ++ LR+ G F Sbjct: 240 APEAVSDEELTRELAWRQGMLSFSGEPLAVVVDEIGRYTNTRIVIRDASIENLRIGGYFR 299 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINI 314 +TD +L+ + P++I + + + Sbjct: 300 AGDTDTMLDALEAGFPIEIHRLPDGTVQL 328 >UniRef50_Q7W4H6 Putative inner membrane sensor for iron transport n=3 Tax=Bordetella RepID=Q7W4H6_BORPA Length = 323 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 72/326 (22%), Positives = 116/326 (35%), Gaps = 17/326 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M + A W + S Q A Q W E D + ++ V ++ Sbjct: 1 MAVPPSKQDDLLTEQAVQWCVRIHDASCSEQDRAALQAWLEADPRHAREYEAVRDIWTLA 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMK------GLLLLLGAGGGWQLWQSETGEGLRADYRTA 114 +P A R + L L A G W + +D R A Sbjct: 61 QDLPAHEAPAKACAPRRRPYPAARRALGACALGLACWAAGWWFAVLPSSYHRYASDARVA 120 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 L DG+ + +N +A R R VRL GE DA PF V Sbjct: 121 T-----VTLGDGTEVDMNIDTAMVYRNYRDARRVRLSDGEAYFRVFHDASH-PFVVEAGA 174 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G +T GT F V + + + + + V++ ASA + + +++ + Sbjct: 175 GTITVTGTAFNVWKSGDNVVVTLVEGRVDLR-ASATGKTVSLQPLTQARYAGRGEPVTRA 233 Query: 235 LD-DESTSWTKDILSFSDKPLGEVIATLTRYRN---GVLRCDPAVAGLRLSGTFPLKNTD 290 +D +S +W L + L + I + RY DPA+AGLRL GT+ ++N Sbjct: 234 VDGAQSAAWRHGKLVLDNTTLRDAIMQINRYLPAEARYTTVDPAIAGLRLGGTYDVRNVG 293 Query: 291 AILNVIAQTLPVKIQSITRYWINISP 316 + + LPV+ + + P Sbjct: 294 ELARALPDILPVRTVRKADGSLALVP 319 >UniRef50_C1DGN9 PupR/FecR-like anti-sigma factor protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGN9_AZOVD Length = 324 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 159/319 (49%), Gaps = 8/319 (2%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + A W L+ + +Q W+E + ++ AWQ+V++L+ + GV Sbjct: 5 PQEPLPEAVIEQAIDWAVRLTYGEADASTRSAFQVWHEASEQHRQAWQRVQSLQGRFAGV 64 Query: 64 PGDVASRALHDTR----LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 P D+A +AL R+ LLL W + + L AD+ TA G Sbjct: 65 PADLAMQALSKLPKVHLRRRQLGKLTLLLGALGATTWGAGEVTPWQRLLADHSTAIGERR 124 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQGQ 176 R +L DGS L LNT SA + FD+ QR +RL GE+ + + D Q RP RV TR G Sbjct: 125 RWRLADGSQLDLNTDSAVSLHFDSEQRLLRLLRGELHLISGSDTGQFAERPLRVQTRDGL 184 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 L ALGT F+VR + T+L V++ AV + A + RI AG+ ++ + Sbjct: 185 LEALGTRFSVRLDEQATRLAVEEGAVSLRPADGS-ELRIAGAGQQWLLNSGLALRLPQSH 243 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 W L + PL E++A L+R+R+G L CDPA+A +SG F L + DA L+ I Sbjct: 244 SAPNGWLDGQLIARELPLEELLAELSRHRHGYLGCDPAIARRPISGNFQLSDIDATLDFI 303 Query: 297 AQTLPVKIQSITRYWINIS 315 A++ +++ +TRYW+ + Sbjct: 304 ARSHDLRLYRLTRYWVRLG 322 >UniRef50_Q1LPC1 Putative FecR n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LPC1_RALME Length = 357 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 80/339 (23%), Positives = 131/339 (38%), Gaps = 36/339 (10%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 +A+ W++ +SP ++ + W +++ + +E + + D + Sbjct: 17 DVREAAARWFSRNQAPALSPAEQQAFAAWLAASAEHRAEYAALERVWQAAAAIDPDRLRK 76 Query: 71 AL----------------HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTA 114 R + GL L G GW WQ + A+Y+TA Sbjct: 77 LAVDESACPTPPLSPPISRRVSAGWRPALLGLCAALAIGIGWIGWQHDAAVATNAEYQTA 136 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G L+DGS + LNT+S ++ + A R V L GE + DA RPF V Sbjct: 137 PGERRTLTLDDGSRIELNTRSRLEIHYSAGTRRVTLREGEAMFEVSHDA-ARPFVVDAGM 195 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVL------------------LASAPAQKRIV 216 G +T GT F VR+ + + V+ +V+V P + Sbjct: 196 GTVTVTGTRFDVRRDTSGVDVSVESGSVDVRGSVRGSVRGSAKDSVKGNAGRTPDTRLSA 255 Query: 217 NAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAV 275 G + + GA +W + L F+D PL V A ++RYR +R D A Sbjct: 256 GLGARIASDGTVTGAASIDLPGVLAWREGKLVFNDAPLSAVAAEVSRYRQQPVRVADAAT 315 Query: 276 AGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 LR+S F +T +L + Q LPV ++++ I Sbjct: 316 GSLRVSSVFSADDTSGLLAALPQMLPVGVRNLPDGSTEI 354 >UniRef50_C4SII2 Fe2+-dicitrate sensor, membrane component n=2 Tax=Yersinia RepID=C4SII2_YERMO Length = 304 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 91/313 (29%), Positives = 148/313 (47%), Gaps = 21/313 (6%) Query: 11 QALRSASHWYAVLSGERVSPQQE----ARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 Q + A+ W S + W +W +Q++ ++ +QQ+ L + P Sbjct: 3 QIQQDAAQWLLDFSEATPGTPEHSKLLDAWYEWCQQNEQHEKIYQQMSGLWHSTRHEP-- 60 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 L RR ++ + L G L Q AD RT G + L+DG Sbjct: 61 ----------LRRRPALRVSVWLALMVSGLLLSQ-LPYHYWLADQRTVIGEIKHIALDDG 109 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 S + LN+ SA ++ + + QR + L GE+ AKD +RPF V +R Q ALGT +TV Sbjct: 110 SEIILNSNSAVNIHYSSGQRLIVLQRGEVYAIVAKDPAKRPFVVSSRDAQARALGTRYTV 169 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 QQ T++ V + VEV K + AG+ + + +F + + SW +D Sbjct: 170 EQQPEETKVSVVESTVEVRANGNLQAKVTLAAGQQVSLNQHQFIGPVSHNRNADSWVQDQ 229 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDP----AVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 L F D PL +VI L+RYR G++ DP A++ LR +G P ++D L+++ Q+LP+ Sbjct: 230 LIFEDAPLEQVIEQLSRYRPGLMYFDPRSRSALSELRFTGVLPATDSDQALSLLRQSLPL 289 Query: 303 KIQSITRYWINIS 315 K+ + + +S Sbjct: 290 KVATPLPGLVWLS 302 >UniRef50_B7V267 Probable transmembrane sensor n=7 Tax=Pseudomonas aeruginosa RepID=B7V267_PSEA8 Length = 331 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 139/320 (43%), Gaps = 23/320 (7%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA----- 68 ++A W L ++ W Q + A+ + E L +A Sbjct: 17 QTAQAWLVRLR-GTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEAD 75 Query: 69 -----SRALHDTRLTRRHV-----MKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 R +R RR + LL +L GG WQ + + RADY A G V Sbjct: 76 ALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQ--PGDWLQDWRADYVAAPGQV 133 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 + +L DGS L+L+ SA VR D QR V L G A+ +DAL PF V +G+ Sbjct: 134 AEWKLADGSYLSLDAGSAVRVRIDGGQRRVELLRGAAALRVKRDAL--PFVVEAGEGRAR 191 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLA-SAPAQKRIVNAGESLQFSASEFG-AVKPLD 236 LGTEF VR+ T++ V Q V V A A + ++ AG+ + F+ + G V Sbjct: 192 VLGTEFEVRRGAGATRVTVLQGRVAVSAGTGAGAAEEVLGAGQQVGFADGKLGRPVAIDA 251 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W + LSF +PL EV+ L RY G +L D A+ +SG+F + +A L Sbjct: 252 AAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKS 311 Query: 296 IAQTLPVKIQSITRYWINIS 315 + L + Q + + I Sbjct: 312 LQAVLGYRQQILFGRLVVIR 331 >UniRef50_C6XPM9 Anti-FecI sigma factor, FecR n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPM9_HIRBI Length = 349 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 145/341 (42%), Gaps = 30/341 (8%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 L +R++ A+ W L + VS AR+ QW + N+ + ++ + L + Sbjct: 8 LSLPTRQRREAQAAEWVTKLDADTVSAIDRARFDQWMSSSEKNRECYYRIAKAWSALDDL 67 Query: 64 --------PGDVASRALHDTRLTRR-----HVMKGLLLLLGAGGGWQLWQSETGEGLRAD 110 DVA + R +R+ M +L++ + + + A Sbjct: 68 EELQHLAESDDVAELLKQNRRQSRKIVQSIGAMAAMLIIGFSTWVALPYLNTQTYKYEAF 127 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 TA G + QL DGSL+ NT + + + + R + L GE A A RPF V Sbjct: 128 ISTAVGEMQNIQLPDGSLIKANTNTHLVIHYSKNSRDINLLRGEAFFEVAH-APDRPFSV 186 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA------------SAPAQKRIVNA 218 + Q+ A+GT F VR ++ + V++ V ++ +A + ++A Sbjct: 187 VAGDRQVRAVGTAFNVRLREAKLAVTVEEGRVALINKKAMLVQNKNPENNAAQELTQISA 246 Query: 219 GESLQFSAS--EFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPA 274 G+ F E ++ + SW ILSFS +PL +I+ ++RY N + D + Sbjct: 247 GQRAVFDTDIEELEVLQAENLQRRLSWRNGILSFSGEPLSFMISEVSRYSNVEIEIADES 306 Query: 275 VAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 + + ++G F + DA+L V+ V I+ I + + ++ Sbjct: 307 LKDMPVAGYFKVGEVDAMLEVLDLMSDVTIERIDQNKVRLT 347 >UniRef50_Q3SNK9 FecR protein n=2 Tax=Nitrobacter RepID=Q3SNK9_NITWN Length = 334 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 10/310 (3%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV----ASR 70 A W+ L G+ P ++ W + D A+++V + + A+ Sbjct: 26 EALDWFVRLQGQSGDPATSRAFRAWLDGDPRRAAAFEKVTEVWGAAEFLQATKNVADATG 85 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQ---SETGEGLRADYRTAKGTVSRQQLEDGS 127 + TRR + + + + L+ADY TA G L DGS Sbjct: 86 VAAPRQKTRRRSLAKKAAAVASAVIVAFALAKGPDLSLRLQADYVTAAGEQRLVTLPDGS 145 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 LTLNT SA + F QR VR+ GE + L PFRV G + GT F+V+ Sbjct: 146 RLTLNTGSAVALDFANGQRDVRVLKGEAYFDV-RSGLPIPFRVAGHFGDVEVKGTAFSVK 204 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE-STSWTKDI 246 D+ + + + VEV + P + ++ GE++ +A+ V+ +D E S +W + Sbjct: 205 LDDSEDNVVLSRGVVEVANRAHPREHASLSPGETVSVTATSISPVRKIDAERSLAWLEGR 264 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 + F D+P GEV+ L RY G + A+ + +SG + L ++ +A+ + Sbjct: 265 IRFDDRPFGEVLNDLRRYYPGRIFVATSAIEQVSVSGNYKLDQPLLVIQSLAEAAGATVT 324 Query: 306 SITRYWINIS 315 + + + Sbjct: 325 VLPGGIVVLR 334 >UniRef50_Q4KBX2 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KBX2_PSEF5 Length = 308 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 89/314 (28%), Positives = 138/314 (43%), Gaps = 12/314 (3%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 +TD +A W +L +P Q +QQW ++ + A + + L LG Sbjct: 1 MTDHPESLEDAAIDWLVLLHSGNATPAQRMAFQQWRQRSPAHAAAAAEAQQLWGDLGQTE 60 Query: 65 GDVASRALHD-TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 +A R RR LL A G WQ +DY T G L Sbjct: 61 TARQHQAPPVMVRQPRRLWPALAASLLLALGAGLGWQQWPAS--TSDYHTGVGQQQSITL 118 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS +TLN+ SA V + A +R V L GE D QRPF V + QL + + Sbjct: 119 ADGSRVTLNSASALSVAYSADERRVILRSGEALFEPLADP-QRPFVVQAQAQQLQSAASA 177 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES--TS 241 F+VR+ + + V++ V+ AP ++ A + LQ+ + + D + T+ Sbjct: 178 FSVRRDGHQLTVVVREGQVQFSGDHAP---VLLQADQRLQYQPGQPLLAQQTVDAASLTA 234 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W + L F+ +PLGEVI L RY++G +L D +A L +SG F L + L + Q Sbjct: 235 WQRGKLIFNGRPLGEVIGELERYQHGRILISDGQLAALAISGVFDLHDPQGSLKALQQRY 294 Query: 301 PVKIQSITRYWINI 314 P+ + + W+ + Sbjct: 295 PLHVTYLP--WLAV 306 >UniRef50_C6XBX5 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBX5_METSD Length = 331 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 84/323 (26%), Positives = 133/323 (41%), Gaps = 24/323 (7%) Query: 13 LRSA-SHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV---- 67 + A W L+ + + + + QW + ++ AWQ+++ L L +P Sbjct: 11 IEEALVSWSVKLASGQATERDYEDFHQWRASNPAHEQAWQKLQALEANLVNMPETAKTLA 70 Query: 68 -----ASRALHDTRLTRRHVMKGLLL-LLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 A+ RR +K L + L+ G L +Y G + Sbjct: 71 INTLDAASRQRAVHHGRRKALKLLGIGLVLVTSGACFLNDHGPWALETEYAVPIGKKMQL 130 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA----LQRPFRVLTRQGQL 177 L DG+ L LNT + V + +R + L GEI I T D+ R F V T L Sbjct: 131 DLADGTRLMLNTNTRIKVHYSLLKREIVLTSGEIYIATGSDSEGPWAHRSFWVQTPNASL 190 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT+FT Q T+L V + AV + AQ V+AGES A+ +K D Sbjct: 191 EALGTQFTADQNKQRTRLHVIESAVAI----HGAQTLNVHAGESYDIYAANQDPIKTADT 246 Query: 238 --ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN---TDAI 292 + T W +L L + L+RY+ ++ D VA + +SG F L Sbjct: 247 HFDPTGWMDGVLVAKGMRLDNFASELSRYQAVHIQMDSEVAAMTVSGVFQLNQQYPAVHA 306 Query: 293 LNVIAQTLPVKIQSITRYWINIS 315 L +A++LP+K+ ++ + I Sbjct: 307 LRAVARSLPIKLSPLSATQLQIE 329 >UniRef50_A9CFJ7 Two component sensor kinase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CFJ7_AGRT5 Length = 323 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 7/313 (2%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG-GV 63 LT +R+ R A+ W + A +++W E D +N A+ + + + + Sbjct: 10 LTRDQRKRNREAADWVFRNRDPDQPETELAEFRRWMELDPENCRAYTAAKRILGEARTAI 69 Query: 64 PGDVASRALHDTRLTR-RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 D R + +R R+ + ++ + A G + + AD + + Sbjct: 70 RSDAGLREAPVSSSSRGRNAIISSVVAIAAAGTLFIALDGP-MRMSADIMSDTDEMPEVT 128 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 LEDGS + LN SA + F + +RTVRL G+ + DA +RPF V +TALGT Sbjct: 129 LEDGSRVQLNASSAIALDFTSERRTVRLLRGQAFFQVSPDA-KRPFSVSADDTLVTALGT 187 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESL-QFSASEFGAVKPLDDE-ST 240 F VRQ T++ V +H+V V A V GE + + + ++ D + Sbjct: 188 AFDVRQSATDTRIAVTEHSVRVDFKEPGALPVKVGEGEEVLHLNETGKSTIRKTDANTAL 247 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W + L+ + PL VI + R+ +G ++ + A A +SGT + +T++ LN + Sbjct: 248 AWRRGQLTVDNMPLSYVIEEIQRHFHGRIVIGNEATARRVVSGTLFVTDTESALNFLRTA 307 Query: 300 LPVKIQSITRYWI 312 L ++ I + Sbjct: 308 LNIQTYKIGPIIV 320 >UniRef50_Q2RRS2 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRS2_RHORT Length = 329 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 76/323 (23%), Positives = 126/323 (39%), Gaps = 11/323 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ- 59 M + +A W+ L ++ W + D + ++ +E L Sbjct: 10 MTTATYTHEDPVVDAALDWFTRLRAGTPDDATLRAFRAWRDGDPRHAREFRALEELWGAP 69 Query: 60 -----LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTA 114 A+ A RR + L L W + RADY TA Sbjct: 70 TFAKAATLAGARPAAPARPSRAPWRRRLAFAASLALVLAAIW--RSPDAVVAWRADYLTA 127 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G R L DGS + LNT SA + F +R + L GE DA PF V R Sbjct: 128 TGERERVTLPDGSTMILNTASAVALDFAKGERAITLLAGEAFFDVRHDADH-PFTVTGRF 186 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G++ GT F+V +D+ ++ +++ AV V A Q ++ GE++ +A+ V+ Sbjct: 187 GEVRVEGTAFSVEMKDDRDEIVLERGAVAVRCVGASGQAAALHPGEAVSVTATALSPVRR 246 Query: 235 LDDE-STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAI 292 E +W + F ++PLG V+ L RY G + + A G +SG + L + Sbjct: 247 AAPEHDLAWRNGRIRFDERPLGAVVEDLRRYHKGPIFVLNDAAEGTVVSGNYRLDDIAGA 306 Query: 293 LNVIAQTLPVKIQSITRYWINIS 315 L +A ++ + + + Sbjct: 307 LRTLAAATGAEVIELPAGVVILR 329 >UniRef50_B1ZHY6 Anti-FecI sigma factor, FecR n=2 Tax=Methylobacterium RepID=B1ZHY6_METPB Length = 325 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 13/324 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVEN----- 55 M+P A +A W ++ +S Q ++ W D N+ AW +++ Sbjct: 1 MSPTQKLEDVHA-EAAIQWMVEINSGEMSESQVRAFEAWLRTDHANEAAWVRLQEGLMPC 59 Query: 56 -LRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAG--GGWQLWQSETGEGLRADYR 112 + + G + DV S+ L R +RR + GL L+G G G + + AD Sbjct: 60 GIAARSGTMGHDVLSKRLAAGRQSRRTFIAGLAGLIGVGTIGSGIADRFVPLGNILADRF 119 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T+ G L DGS L L ++SA ++ ++ R V+L GE+ + A A PF + Sbjct: 120 TSTGGQETVALADGSELVLASRSAINIVYETGLRAVQLLDGEVLVRAAPRAT--PFEIRA 177 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 L G F V + + + + AP + + G+ ++F+ Sbjct: 178 GSMALETFGGTFLVEDRAERLAATGVEGSGRIR--HAPGKPESIAPGDMVEFTGGYRRWR 235 Query: 233 KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAI 292 K + +T+W + +L D L + L RY +G+++ DP++A LR +G F L++ +A Sbjct: 236 KVDIEAATAWLEGLLVAKDSDLLAITTRLQRYFSGIIQVDPSIADLRATGVFSLRHPEAA 295 Query: 293 LNVIAQTLPVKIQSITRYWINISP 316 L+ +A++L + + ++R WI + P Sbjct: 296 LDALAESLNLSLTRVSRLWIKLGP 319 >UniRef50_D0Y1A0 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y1A0_9CAUL Length = 331 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 86/330 (26%), Positives = 140/330 (42%), Gaps = 21/330 (6%) Query: 5 LTDSRRQALRS---ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + D R++ LR A+ W+ +LS V + R+ +W ++D N+ A++++E++ G Sbjct: 1 MIDDRQKTLRQDKEAAAWFTLLSDTEVETEALERFDKWIQRD-GNRAAYRRIEDISTAAG 59 Query: 62 GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRA------------ 109 + D RA L RR L G +LW G+ A Sbjct: 60 DLRDDPEMRAAAREALGRRKPRASASSLFRLGPP-RLWGGLALAGVIASAVLFATLTRPK 118 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 Y TA G QL DGS + LNT +A V+F +R + L G+ A D RPF Sbjct: 119 TYETAVGGRMTAQLSDGSTVQLNTDTALRVKFSHGERRLELVRGQAFFNVAHDP-ARPFL 177 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF--SAS 227 V ++ ALGT F VR + + Q V V + Q ++ G+ L Sbjct: 178 VRAGAMEVRALGTRFDVRHDSADASVALAQGQVRVRQRTGQRQAWTLSPGQGLTVLSDGR 237 Query: 228 EFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AGLRLSGTFPL 286 G + T WT++I++F D LG+ +A + RY + P V A +LSG F Sbjct: 238 STGPARIDVAALTGWTRNIITFHDIALGDAVAEMNRYDRAKITLAPGVPAHAKLSGVFTT 297 Query: 287 KNTDAILNVIAQTLPVKIQSITRYWINISP 316 + + L+ + ++ + + + P Sbjct: 298 GDQEEFLDAAKASFDLESRRRPDGGVELRP 327 >UniRef50_Q4KI13 Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Pseudomonadaceae RepID=Q4KI13_PSEF5 Length = 329 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 21/319 (6%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR--- 70 ++A W ++L + S +A + QW + D + A+ Q + + +A Sbjct: 15 QAALAWLSLLHDQP-SSGDQATFSQWLQADPAHIEAYAQAQVVWELSEQPARTLADEDAF 73 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGGGW-----------QLWQSETG-EGLRADYRTAKGTV 118 ALH + AG WQ + L ADY +A G V Sbjct: 74 ALHGLLRSMDAARGRARRRWSAGLALAASVLLAVALGAGWQPGRWVDDLGADYVSAPGQV 133 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 L D S +TL+ SA V F +R V+L G + + PF V ++G+ Sbjct: 134 RTLTLADQSQVTLDADSAIAVDFSRGERHVQLRRGAGFFSVSHTGE--PFVVDAQEGEAR 191 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 LGT+F VR Q Q+ V V V A AQ+ ++ AG+ + + + +D E Sbjct: 192 VLGTQFEVRLQPGGAQVTVLSGRVGVTPAKGAAQQ-VLGAGQQVAYGHGVAAPLHAVDSE 250 Query: 239 S-TSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + +W + L++ PL EV+ L RY G +L + +A R+SG+F K+ A+L+ + Sbjct: 251 AQLAWRQGWLNYYHAPLAEVVDDLRRYFPGRILLLNDELAARRISGSFSSKDPQAVLDSL 310 Query: 297 AQTLPVKIQSITRYWINIS 315 L + + +I + Sbjct: 311 QAVLGFQQHRVLGRFIVLR 329 >UniRef50_B0KMD4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KMD4_PSEPG Length = 309 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 15/310 (4%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 D R+A W L+ V P + W Q ++Q A+ + L + Sbjct: 7 PLDPSPDVRRAAQAWVVRLTSGDVRPGDVEAARAWCAQAPEHQQAFVEARRLW----ALS 62 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 G + + A + + +L+LG G W + ADYRT G L Sbjct: 63 GQLQAPARRRAPARQWALASAAVLVLGVGVA-LAWHGQ----WGADYRTGVGERRVVTLS 117 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DGS ++L+ +SA DV + R + L GE A D RPF V Q TALGT + Sbjct: 118 DGSRISLDAESAVDVEMNDRARRITLRKGEAVFEVAHDP-ARPFTVQAGAVQATALGTVY 176 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWT 243 V ++ + V++ V V S A + ++AGE++ A G LD D + +W Sbjct: 177 AVSREGASVGVVVKRGRVAV---SDTADRVELSAGEAVGREAGRLGGKHGLDVDSALAWQ 233 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + L F PL +V+ L RYR G L D + GL++SGTF L D L + Q P+ Sbjct: 234 QGRLVFEQAPLAQVLKALERYRPGWLLIGDEQLRGLKVSGTFQLDRLDEGLATLEQAFPL 293 Query: 303 KIQSITRYWI 312 I + + + Sbjct: 294 SIHRYSDFLL 303 >UniRef50_B4RFZ1 Transcriptional regulator n=2 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFZ1_PHEZH Length = 328 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 86/329 (26%), Positives = 134/329 (40%), Gaps = 19/329 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ RQ L A+ W+A L+ V+ +++W ++D DN A+ VE ++ Sbjct: 1 MSERAATPSRQEL-EAAEWFAKLNKLSVTTDALRTFREW-KKDPDNAAAYAAVERTWSEA 58 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLR-----------A 109 + D R D L RR + L Sbjct: 59 RSLRSDPDIRRAADEALARRPARPAASRASRLWPAAVVAALLVAVLLVGAAAVALTQRPV 118 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 Y TA G LEDGS L LNT +A V F R + L G+ A D RPF Sbjct: 119 SYATAHGEQRLVVLEDGSRLRLNTDTAVTVSFRGEARRLALKRGQAFFEVAHDP-SRPFI 177 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V + ALGT F V ++++ ++ + + V V ++ +S+ + Sbjct: 178 VTAGDTTVRALGTRFEVWRRNDGARVTLVEGKVSVT--RGQQAPTVLAPSQSVVATRDGL 235 Query: 230 GAVKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AGLRLSGTFPLK 287 V +D ++T WT L+F D PL E +A + RY + DPA A +SG F Sbjct: 236 TPVTSVDPVQTTGWTTGRLTFRDTPLSEAVAEINRYSAQTIALDPAAPASRPVSGVFDAG 295 Query: 288 NTDAILNVIAQTLPVKIQSITRYWINISP 316 +TDA ++ + L ++ + R I +SP Sbjct: 296 DTDAFVDAVGVLLNLEAERQGRI-IRLSP 323 >UniRef50_B2Q6M2 Putative uncharacterized protein n=2 Tax=Providencia RepID=B2Q6M2_PROST Length = 328 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 69/317 (21%), Positives = 123/317 (38%), Gaps = 12/317 (3%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 D+ A+ W+ +++S +Q ++ W ++ A++ + + + +P Sbjct: 9 PDTLDSIDEQAALWFTRKHSQQMSAEQAKQFDIWLHASPEHAKAYEAIAGVWREFDSMPR 68 Query: 66 DVASRALHDTRL---TRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 + +L R + L L A + + A Sbjct: 69 PASIELPPKKQLFFRLWRPLGNTLAALFIAAILFLPYSQLPSMLFNNMTLVATNMPKEVT 128 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 L DGS L LN Q+ V ++ R + L G K RPF +L + ++ +GT Sbjct: 129 LSDGSALFLNRQTRVRVAYETEVRRIYLDEGNAYFKV-KSNPYRPFVILADERRIQVIGT 187 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA----SEFGAVKPLDDE 238 EF V + + V + V + A + AG+S SA + + PLD Sbjct: 188 EFEVDRHQQQVAVRVSKGIVSLKTGQEQA-TTYLFAGDSATSSAINSPVKMNKIAPLDVA 246 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVIA 297 W LSF+DKPL EV++ L Y + P++A ++SG L+ ++ + Sbjct: 247 R--WRFGELSFTDKPLAEVLSELNAYSPVNIELSPPSLAQSKISGRINLRQPESFFQALP 304 Query: 298 QTLPVKIQSITRYWINI 314 LPV++ + I I Sbjct: 305 MLLPVQVVYQDKNNILI 321 >UniRef50_C5SQ91 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQ91_9CAUL Length = 325 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 83/306 (27%), Positives = 126/306 (41%), Gaps = 20/306 (6%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV--- 67 + R A+ W L + PQ EA++ W D + A + Q + Sbjct: 15 DSAREAAEWLVKLEEGPLDPQTEAQFAVWLSADPAHAAALSRAREAWRQAEALRPGREAL 74 Query: 68 ------ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 ++ L R + LL G ++ S T AD RT G V Sbjct: 75 MGRQVYGAQVLEPVLSAMRQPLAAAACLLLGISGMAIYGSVTA----ADLRTGPGEVRTF 130 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTA 179 +L DGS LTL+ SA D+ F+ R + L G + A A RPF V+ R G+ A Sbjct: 131 RLADGSQLTLDGNSAVDLAFNTGTRRIALRKGAAYVIAAPRQGAETRPFVVVARGGESQA 190 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGTEF V D ++ V +H V V S + ++ G+S+ + + AV+ Sbjct: 191 LGTEFAVEYLDTGVRVTVTEHLVRV---SHDHGQAVLAEGQSVIYGLEGWQAVQTAPSLQ 247 Query: 240 TS-WTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + W + F PL +V+A L RYR L +A R+SG F ++ L+ I Sbjct: 248 AATWRDGRMVFDRAPLKDVVAQLNRYRRDRLYIAGTGLAERRVSGVFDTRDPQNALSSIT 307 Query: 298 QTLPVK 303 L ++ Sbjct: 308 TGLKLR 313 >UniRef50_B0SXJ1 Anti-FecI sigma factor, FecR n=2 Tax=Caulobacter RepID=B0SXJ1_CAUSK Length = 342 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 23/319 (7%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 P + + + +A+ W+A L G+ V + +++W D N AW + + + ++L Sbjct: 4 TPPVNERQEDPDSAATTWFARLQGDAVLVEDRRAFERWLGADARNAAAWDRCKGVWDRLS 63 Query: 62 GVPGDVASRA----------LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRA-- 109 + D A A +RL+RR ++ ++ G G + +G + Sbjct: 64 LLDSDPALAALRADALGASDASSSRLSRRGLLTAAGVVAMVGSGAAVAWRLMPKGASSST 123 Query: 110 -------DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD 162 + TA G +S L DGS++TL+T SA V +R + L G+ AKD Sbjct: 124 STASADPTFTTAVGELSTFHLADGSVVTLSTDSAVKVDPWNRERRLSLLRGQAFFKVAKD 183 Query: 163 ALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI-VNAGES 221 A RPF V +TA+GT F VR + + + V + S + + ++AG Sbjct: 184 A-ARPFVVAVGDKLVTAVGTAFDVRLDPGKLSVTLLEGRVRIAGPSPRGDRMVEMSAGSK 242 Query: 222 LQFSASEFGAVKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLR 279 + + + +D + +SW + L F +PL V+A + R+ LR DP VA Sbjct: 243 FVAADAADWNIAAVDAVKESSWLQGRLVFDGEPLSAVVAEMNRFSTRKLRVSDPRVAATP 302 Query: 280 LSGTFPLKNTDAILNVIAQ 298 +SG F DA + I Sbjct: 303 VSGVFKTGQVDAFVAAIRS 321 >UniRef50_Q2L2C5 Transmembrane sensor protein n=1 Tax=Bordetella avium 197N RepID=Q2L2C5_BORA1 Length = 303 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 10/307 (3%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 A R A W+ VL S A+ W D +Q AW +V + + VP +A Sbjct: 3 DARRRAIEWWVVLQSGTASASDRAQLNDWLLADPRHQEAWSRVLEVEQGVRRVPAALAQA 62 Query: 71 ALHDTRLTRRHVMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 T +RR V++GL + A GW +++ + L AD T G V + G + Sbjct: 63 VFKPT--SRRAVLRGLGAASIAALSGWAVYRHTPWQRLIADRSTGLGEVDTLAMAPGLDV 120 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 L + +A V + +RL GE+ + A F + T + A F V Sbjct: 121 ALASDTAVQVYRKRGHQALRLLRGEVFV----HAQGVAFTLDTDSASIAADSARFCVSLD 176 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSF 249 + ++++ + + V + L+ SAS+ + ++ +W +L Sbjct: 177 EQGCRVELLDGELAIERGDY---SLRVAGAQGLRLSASDGLTRLAPNPDAAAWVDGMLVA 233 Query: 250 SDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 D L E++A L R+R+GV+ D +AGLR+SG FPL + + L +A++LP+ + Sbjct: 234 HDWSLRELVARLARHRHGVIHVDADIAGLRVSGVFPLYDAERALAAVARSLPIALHRRGP 293 Query: 310 YWINISP 316 W+++ P Sbjct: 294 LWLSVVP 300 >UniRef50_B3PLQ9 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PLQ9_CELJU Length = 322 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 91/325 (28%), Positives = 142/325 (43%), Gaps = 20/325 (6%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG--- 61 +TD++ ASHW+A++ VS Q+ +QQWY D ++ A+ +++L Sbjct: 1 MTDTQIAIDEQASHWFALMLEPPVSASQQQAFQQWYNSDPRHRQAYSALQSLWRDSAVAL 60 Query: 62 GVPGD----------VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADY 111 VP R L +R L LW + ADY Sbjct: 61 AVPAANDDTSIGVSGAGGRRLSQAWYRQRPWQALTGLAACLFLAVVLWP----FSISADY 116 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT G L DGS LN+ SA V + +R + + G++ A + QRPFRV+ Sbjct: 117 RTGIGQQQVVLLPDGSRAHLNSDSALAVHYSDKERRLEVLSGDVWFDVAPNP-QRPFRVM 175 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 G+ ALGT F V Q + V +H V V L +RI+NAGE L + A F A Sbjct: 176 AAGGETVALGTAFAVSLQPRGADVVVTEHQVRVSLEGDSQNQRILNAGEGLSYRAGSFSA 235 Query: 232 VKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNT 289 + D+ SW L F ++PL EV+A L + G ++ ++A +++ + Sbjct: 236 IGVADESLLLSWRNQQLVFLNQPLIEVMAILEHWHPGKLVLLGDSLAQHQVTLILDTRQP 295 Query: 290 DAILNVIAQTLPVKIQSITRYWINI 314 + +L+ + Q L +K S+ I Sbjct: 296 EQLLDKLVQGLNLKTFSVAGKLTFI 320 >UniRef50_C1DDL2 Anti-sigma factor, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DDL2_AZOVD Length = 323 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 93/326 (28%), Positives = 142/326 (43%), Gaps = 18/326 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ- 59 M P D+ Q+ A W L ER + + + W D + AWQ+V L Q Sbjct: 1 MKPPRLDAPTQS---AVDWTLRLDPERATSEDRQAFAAWLAADSRHVAAWQRVNGLLQQP 57 Query: 60 LGGVPG---------DVASRALH--DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLR 108 L + D A RAL + RR + LL LG G + + GL Sbjct: 58 LADLQRAEVRSPGQLDAAKRALDTPASAQRRRLLGGLSLLALGLSGTAAVDRLAPLHGLL 117 Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 AD+ T+ L DG+ L LN ++A DV F+ +R + L GE+ A D L RPF Sbjct: 118 ADHHTSTAQRKSVTLADGTQLILNARTALDVHFNDARRRIHLHEGELLAQVAADPL-RPF 176 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 ++T QGQ+ A T VRQ+ + + V + + L + +++ G++ F Sbjct: 177 VIVTAQGQVKASETRLLVRQEAGRSLVSVLRQ--DAWLQQRDGSETLLHPGQAAWFDERG 234 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN 288 +W++ L D+PLG +I + Y G+LR PA A +R G F + + Sbjct: 235 MRPADASLLTRATWSQGYLESRDEPLGRLIEAMRPYYPGLLRISPAAAEIRTFGIFQVDD 294 Query: 289 TDAILNVIAQTLPVKIQSITRYWINI 314 L +A+TLPV++ S I Sbjct: 295 IQQALRSLAETLPVRVTSYGPLLTTI 320 >UniRef50_Q217A2 Putative FecR n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q217A2_RHOPB Length = 334 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 120/318 (37%), Gaps = 12/318 (3%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR---------NQ 59 +A W+ L + +W Q ++ A+ ++ + + Sbjct: 18 PDPVTDAALDWFVRLQASPEDAAVSDDFARWRNQSPNHAEAFAKLTQIWTSPEIELATQR 77 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 L R + W +ADY TA G Sbjct: 78 LAQRSVHPLPIRRRSPPRRRWTRSITAIAAAALIAIGLQWVPALIIQRQADYMTATGDRQ 137 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 + L DGS +TLNT SA +RF +R+VRL GE DA PF V R ++ Sbjct: 138 QVILPDGSRMTLNTASAVALRFSNGERSVRLLQGEAFFDVVPDATH-PFTVAGRFAEVGV 196 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DE 238 GT F+VR D + + + +VEV A+ + G S+ SA+ +D Sbjct: 197 KGTAFSVRTDDQQDVVVLARGSVEVARLPDRAETARLEPGYSVSASATALSGASHIDIAS 256 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 S +W + F+D+PL +V+ + RY VL D + + +SG++ L N + + +A Sbjct: 257 SLAWLDGRIVFNDRPLRQVLDEVKRYYPRPVLIADRRIGDVTVSGSYRLANPEGTIRSLA 316 Query: 298 QTLPVKIQSITRYWINIS 315 + I + + Sbjct: 317 MAAGATVTRIPGGLLILR 334 >UniRef50_B4WC07 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WC07_9CAUL Length = 325 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 82/314 (26%), Positives = 122/314 (38%), Gaps = 12/314 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M R + A+ W + E + Q W D +++ A+QQV L Sbjct: 1 MVTPSASRRDRVRAEAAVWLTRIQRETGVEESRQALQDWLALDPEHRLAFQQVTETWEFL 60 Query: 61 GGV-----PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 G P A RR ++ L+ LG + Y T + Sbjct: 61 PGAAALMSPKHSAPARSSRGSAPRRSAVRPALVGLGLAACVLAAVGIMVIKGGSVYVTEE 120 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G L DGS LTLNT S A V + A +R VRL GE A A D PF V+ Sbjct: 121 GQHRAMTLADGSRLTLNTDSRAKVIYSATERRVRLDRGEAAFDVAHDPAH-PFVVVAGTT 179 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK-----RIVNAGESLQFSASEFG 230 ++ ALGT F VR+Q + + + + V++ A A A+ + G+ LQ + Sbjct: 180 EIRALGTAFVVRRQGDRVSVTLVRGKVQISGAGADARGAKRVLATLIPGQRLQVAPQAQP 239 Query: 231 AV-KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 + P + T+W + + F L E + RY + D V+GLR+SG F Sbjct: 240 QLDTPSIEMVTAWEQGEVIFESATLAEAANEMNRYGPIKVTVDADVSGLRISGVFATNQA 299 Query: 290 DAILNVIAQTLPVK 303 AQ ++ Sbjct: 300 AEFAAAAAQLHGLR 313 >UniRef50_B2HV65 Fe2+-dicitrate sensor, membrane component n=5 Tax=Acinetobacter RepID=B2HV65_ACIBC Length = 338 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 83/330 (25%), Positives = 154/330 (46%), Gaps = 24/330 (7%) Query: 9 RRQALRSASHWYAVLSGERVSPQQ--EARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 Q + A+HW LS + + ++ + ++++W + + ++ +E + + Sbjct: 8 HHQLVEEAAHWIVQLSSDDENSRKTAKQKFEEWKKTSEQHRQVAADIEQCIGSIQKLSQT 67 Query: 67 --------VASRALHDTRLTRRHVMKG--LLLLLGAGGGWQLWQSETGEGL-RADYRTAK 115 VA +A ++ +H+ G ++ A G + ++T AD + Sbjct: 68 IGHKKVTKVALKAGLNSGKAYKHLRAGTAFAVVFVAMSGALFYLTDTTVAYVTADIQGHS 127 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G + Q L DGS L L +SA ++ F +QR V L G+I + AKD RPF V T G Sbjct: 128 GQWTTQTLPDGSRLILRGKSAVNLDFKTNQRVVELVQGQIYVDVAKDKT-RPFLVKTSHG 186 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS------APAQKRIVNAGESLQFSASEF 229 ++ ALGT F+V + T+L++ V+V ++ IV AG++++ + Sbjct: 187 KIQALGTAFSVTYDPSATELNMLHSKVKVEATQVKTTQLHTTRQAIVEAGQAIKMDQNGV 246 Query: 230 GAVKPLD--DESTSWTKDILSFSDKPLGEVIATLTR-YRNGVLRCDPAVAGLRLSGTFPL 286 + L+ +E W K L + PL +V+ L R Y+ ++ D A+ +R++ PL Sbjct: 247 QKLPALNVYNEQQKWQKHQLMVENLPLNQVLQELDRNYKGKIIFNDAALQHVRVNAVLPL 306 Query: 287 KNTDAILNVIAQTLP-VKIQSITRYWINIS 315 T L ++A P +KI+ IT + + +S Sbjct: 307 DQTTESLKLLATVFPDLKIKQITPFVVMVS 336 >UniRef50_B0T8M8 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0T8M8_CAUSK Length = 333 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 145/324 (44%), Gaps = 16/324 (4%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 S +A R A+ W+ L+ + + + W + +N+ A++++E++ + G+ D Sbjct: 6 KSAPRATREAADWFTRLNEPPIEVDELEAFSAWNAR-PENRAAYERLEDISRAMAGLQDD 64 Query: 67 VASR-----ALHDTRLTR----RHVMKGLLLLLGAGGGWQLWQSETGEGLRA-DYRTAKG 116 R AL R R R V++ +++ L T LRA Y T G Sbjct: 65 PDMRQATAEALQRGRTRRERQARFVVRPRIIIGALAAACVLAAIATSVFLRAPTYSTRVG 124 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 LEDGS + LNT SA VRF A QR V L G+ A +A QRPF V+ Q Sbjct: 125 ESLSATLEDGSRIQLNTDSAVKVRFTAGQRRVDLVRGQAMFEVAHNA-QRPFVVVAGDAQ 183 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE--FGAVKP 234 + ALGT F VR+ ++ + Q +VE+ S + AG+ L ++ A KP Sbjct: 184 VRALGTRFDVRRVGQEVRVVLAQGSVEITDRSLSPAPWRLKAGQGLALKPAQSVAAAAKP 243 Query: 235 LD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AGLRLSGTFPLKNTDAI 292 +D +TSWT L+F PL + +A + RY + P+V + G F ++D Sbjct: 244 VDVPSATSWTVGKLTFQGVPLTDAVAEVNRYSRDKIVLAPSVPGDRLVGGVFTAGDSDDF 303 Query: 293 LNVIAQTLPVKIQSITRYWINISP 316 + ++ +K + + P Sbjct: 304 IAAVSALYRLKAVRQANGDLILQP 327 >UniRef50_B4SJG6 Anti-FecI sigma factor, FecR n=2 Tax=Stenotrophomonas RepID=B4SJG6_STRM5 Length = 345 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 75/328 (22%), Positives = 119/328 (36%), Gaps = 25/328 (7%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS---- 69 +A+ W P+ EA Q W + + ++ A+ V + LG +P V + Sbjct: 17 EAAAAWLVRRQDAAWQPKDEAALQHWLAESEAHRQAFADVARTWDDLGQLPRPVLASDAR 76 Query: 70 --------------RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 RA+ R R + + G+ + D T Sbjct: 77 AVITPAVPAIQRRGRAVRHARSWRLPRVAAAAAVAMLALGYLGYGWYAAPSYVQDVATGA 136 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G + QL DGS ++LN +S V F +R V L GE A A RPF V ++ Sbjct: 137 GEIRDLQLPDGSRISLNARSTLAVHFYRSRREVVLSQGEAFFEVAP-AADRPFTVDAQRS 195 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK-RIVNAGESLQFS--ASEFGAV 232 ++T +GT F VR + V V V A ++A + L + + + + Sbjct: 196 RVTVVGTTFNVRNGPGEVVVKVLHGHVRVQPDRAEGASPVSLHAEQGLAVTTLTAAYRPI 255 Query: 233 KPLDDESTSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDA 291 D W L F PL EV + +Y + V P + L +SG Sbjct: 256 AASADSIGGWRNGRLVFRRTPLDEVAQEVGQYLGHPVTLGQPGLKFLPVSGYAATDAPAT 315 Query: 292 ILNVIAQTLPVKIQSI--TRYWINISPL 317 L + LPV++ Y I+ P+ Sbjct: 316 FLEALPDLLPVQVTRTAQGGYRIDERPV 343 >UniRef50_A9CF44 Two component sensor kinase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CF44_AGRT5 Length = 331 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 78/311 (25%), Positives = 124/311 (39%), Gaps = 21/311 (6%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG------------ 61 A+ W L G P+ +A +++W Q+N+ AW++ + LG Sbjct: 17 EEAADWLLRLQGGATEPRLKAEFERWLAASQENRLAWERTCKIWRNLGLVEPEFKNLWED 76 Query: 62 --GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 +PG A R + RH + L+ L ADY+T+ + Sbjct: 77 AAHLPGKAAINPTRR-RWSVRHYAGAAVAAASLCLV-VLFIPTFSVRLEADYQTSTAEMR 134 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 LEDGS + L SA F +RTV++ GE D RPF V + + Sbjct: 135 TITLEDGSTVELAAASALSADFRDGRRTVKVLKGEAFFDVVPDK-ARPFVVEAKNVTVQV 193 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F V D TQ+ + +VE +AP + GE L A+ + + E Sbjct: 194 LGTAFDVDLTDGVTQVALAHGSVEASFRNAP--PTRLVPGEMLVVDAAGAIRKENVPVED 251 Query: 240 T-SWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTDAILNVIA 297 W K L D +G V+ + RY L D +A +++G + L++ D L + Sbjct: 252 IGGWRKGELYVVDATIGSVVEQIQRYHPAWLTMADKRLAEQKVTGFYDLRDPDRALEALV 311 Query: 298 QTLPVKIQSIT 308 + K+ +I Sbjct: 312 EPYSGKVHAIG 322 >UniRef50_C6X7E8 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7E8_METSD Length = 335 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 18/321 (5%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP- 64 + Q ++A W+ L + + ++++QW Q +Q A++QV L + P Sbjct: 3 ANREHQLRQAAIRWFVRLQTAAMDDPERSKFEQWLLASQAHQQAYEQVATLWERFDSAPA 62 Query: 65 ----GDVASRALHDTRLTRR--------HVMKGLLLLLGAGGGWQLWQSETGEG-LRADY 111 D + + + R V+ +L+ G G+Q ++ L+A Sbjct: 63 LENLADAMEQQAYFKKPQRNGRIKKTVAGVLSAAVLVFGLTHGYQEYERWQAAPVLQAVA 122 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 + G +SRQ+L+DGS LTLN+ S A+V F +R V L GE A+D RPF VL Sbjct: 123 QAGFGQISRQRLQDGSELTLNSGSDAEVTFYRDRREVHLKRGEAIFDVARDP-DRPFIVL 181 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF-SASEFG 230 + ++T GT F V + ++ V V+V + A + GE + +A+ Sbjct: 182 SGNARVTVYGTRFAVNRLQRLVRISVDHGLVKVEPQNTTASPLWLRKGEVAEVPNAAAPL 241 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLR--LSGTFPLKN 288 ++ S+T+ ++SF L E++ TL+RYR L+ A+ ++ +N Sbjct: 242 RSSHQAADAFSFTQGMISFDHADLSEIVETLSRYRRPPLQLQAALQHSPAQVTAVIKTRN 301 Query: 289 TDAILNVIAQTLPVKIQSITR 309 + ++ + Q PV+I Sbjct: 302 IEKFISQLPQLAPVRIDHRDD 322 >UniRef50_Q2RW10 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RW10_RHORT Length = 318 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 111/321 (34%), Gaps = 9/321 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M P L AS W G P A ++ W D + AW+ Sbjct: 1 MIPADHSLPASVLEQASDWVFRQQGALGEPPPRADFEAWLAADPRHGEAWRLACATWGAT 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG--LRADYRTAKGTV 118 G + A+ R RR L+ L + + +AD+ T G Sbjct: 61 GALAPVFAAPPRPLCRPPRRKRPSKPLVALALAACLAAFVVLSPLRLLWQADHLTGSGES 120 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 + L DGS + L SA R R V L G+ A D RPF V +T Sbjct: 121 ATVSLRDGSRVALAADSALSTRISEAGRAVTLLKGQAFFQVAPDRT-RPFVVSGGGVSVT 179 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA--SEFGAVKPLD 236 GT F V D + V + V V + + GE + E Sbjct: 180 VTGTAFDVALDDGRVTVAVAEGGVRVDYQ---GRSERLVPGEKVSVDPAMGEIRRAAVDP 236 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTR-YRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W + L ++ L VI L R Y ++ D A+ ++G + L++ + L Sbjct: 237 ADVAAWRQGRLVSDNQRLSAVIEALRRQYSGVIVLTDAALGETPVTGVYDLEDPERALRA 296 Query: 296 IAQTLPVKIQSITRYWINISP 316 + ++ +T Y + +SP Sbjct: 297 LVSPFGGTVRRLTPYLLVVSP 317 >UniRef50_Q3HKE5 FecR protein n=3 Tax=Rhodobacter sphaeroides RepID=Q3HKE5_RHOS4 Length = 324 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 86/309 (27%), Positives = 133/309 (43%), Gaps = 25/309 (8%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDT 75 A + L G +S Q W E+D + AW +VE L + PG+ + A Sbjct: 15 ARDLFVRLRGRALSK---RELQVWLEEDPAHVAAWAEVEALWGETRA-PGERLAEAEAGA 70 Query: 76 RLTRRHVM---------------KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 M L L +G GG W L Q + L ADY +A+G Sbjct: 71 LSVYLAAMDRGARRRRVLRGGTVAVLALAIGLGGLW-LRQPHLLQDLGADYASARGERRS 129 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS + L+ SA V D R +RL G + + RPFRV +G++T Sbjct: 130 VSLPDGSRVLLDADSAIRVDMDGPDRLLRLLRGAASFEVTRSP--RPFRVRFGKGEVTVH 187 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DES 239 GT F VR ++ Q+ ++Q V V P ++ +V GE +V+ +D E+ Sbjct: 188 GTVFDVRLLEDGGQIVLRQGRVSVRYPGLPVEQPLV-PGEQFSVDGPGRPSVEAVDLAEA 246 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 + W +F LG+++ATL RY G +L + R+SG+ L + +A L + Sbjct: 247 SGWQDGRFAFYRMRLGDLVATLERYLPGHILIASRDLGDRRVSGSLDLDHPEAALESLRD 306 Query: 299 TLPVKIQSI 307 T+ + I + Sbjct: 307 TVGLTITRL 315 >UniRef50_Q0C5P1 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5P1_HYPNA Length = 344 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 75/335 (22%), Positives = 137/335 (40%), Gaps = 31/335 (9%) Query: 11 QALRSASH-WYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP----- 64 + +A+ W L P + A + W D + A+++ E L + L +P Sbjct: 9 DRIDAAARSWAVYLHSGDAKPDKIAEFDAWLAADAAHVHAFRRYEKLMSDLVLIPELGEV 68 Query: 65 ----GDVASRALHDTRLTRR---HVMKGLLLLLGAGGGWQLWQ-----SETGEGLRADYR 112 G A+ + ++ RR V ++++ GGG ++ + + Y Sbjct: 69 GLFEGTRAAPGVIAAKVPRRSSQRVAAFVMMIALVGGGITVFGAGRTFQDASPAMVPGYE 128 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T + QL DGS++TL +S + F R V+L+ GE A D RPF V Sbjct: 129 TTIAEIRDVQLADGSVVTLGARSRIEPTFTDKMRIVKLYEGEAFFDVAPDP-ARPFYVEA 187 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQ---------KRIVNAGESL- 222 + +GT F VRQ ++ V + VEVL A P + K ++ AG+ + Sbjct: 188 GDRLIRVVGTRFDVRQGPETVRIAVVEGVVEVLQADNPRKAEAAREGIAKDVLRAGDEVV 247 Query: 223 -QFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRL 280 + + E + E+ W + L++ + LGE++A RY + + +A LR+ Sbjct: 248 ARIGSGEKTIGEIEPAEAAPWRRGWLTYENASLGEIVADANRYSPRQIVFEGEGIADLRM 307 Query: 281 SGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 + F ++ D + + T + + +S Sbjct: 308 TAAFSVEKIDQFILGLEVTYDLYADYSEPDRVRLS 342 >UniRef50_D0XU60 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XU60_9CAUL Length = 337 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 85/336 (25%), Positives = 133/336 (39%), Gaps = 33/336 (9%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M LTD Q A+ W+A L + +Q W E D ++ A++ +E L L Sbjct: 1 MTAPLTDPISQV---AADWFARLRDDDADLDAWTTFQAWLEADPAHRLAYEAMETLWLDL 57 Query: 61 GG--------------------VPGDVASRALHDTRLTR---RHVMKGLLLLLGAGGGWQ 97 P A+ A R +R R + L+ G Sbjct: 58 EDDAPQALLNAAGATATVETLTRPSGPATPAPTPARASRPGHRRPIPWLIASGAIAAGLV 117 Query: 98 LWQSETGEGLRA--DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEI 155 W + + A DY TAKG V L DGS LTL + V +A +R V L GE Sbjct: 118 AWVAASRWSPSAPIDYATAKGEVRAVTLVDGSRLTLGGATRITVEMNARRRAVTLSEGEA 177 Query: 156 AITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI 215 A +A RPF V ++ LGTEF + + T + V++ V V A + Sbjct: 178 TFDVAHEA-NRPFVVELGDQRVRVLGTEFNISRDQGHTAVTVRRGVVAV--AQVGGGEVR 234 Query: 216 VNAGESL-QFSASEFGAVKPLDDEST-SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDP 273 + G+ + S V+ D ++ +W L + PL V+A RY +R DP Sbjct: 235 LTRGQQVLHAEGSTVQEVREADPDAVFAWRSGKLIYDKAPLAMVVADFNRYGGPPIRVDP 294 Query: 274 AVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 + A + +SG F + + A++ +A+ + + Sbjct: 295 SAAKVTVSGVFLVDSPRAMVERLARFSGLTVVVRAD 330 >UniRef50_B4W7I5 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W7I5_9CAUL Length = 321 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 89/311 (28%), Positives = 128/311 (41%), Gaps = 15/311 (4%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R A+ W A G + E R + W E N A+ + ++L +G A Sbjct: 14 REAARWLAEQDGGLLDAVGEDRLKTWLET-PANARAFARAQSLWRDMGQAARPAAPAWRA 72 Query: 74 DTRLTRRHVM--------KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 + R + L A + L AD T G +L+D Sbjct: 73 RSERRSRRTAIPRIGRSGLPIATGLAAAVVLACMMLDVPTRLHADVLTRPGEQRTVRLDD 132 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 GS++ +NT SA DV + +RTVRL GE A T A DA QRPF V G TALGT F Sbjct: 133 GSVVQVNTDSAIDVAYAPDRRTVRLLRGEAAFTVAPDA-QRPFTVEAGGGSATALGTRFV 191 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF-GAVKPLDDESTSWTK 244 VR++ TQ+ V +H V + S + + + A P + +WT+ Sbjct: 192 VRRRAAMTQVSVTEHRVRIATRSG---SVTTPETMTSTYRPDQAPSAPTPSSPDVDAWTQ 248 Query: 245 DILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L F D+PL EV+ + RY + AV R+SG F + L + QTL V+ Sbjct: 249 GWLVFEDRPLAEVVEEIARYSPTPITVFGRAVRNRRVSGAFGIDQPSRTLARLEQTLGVR 308 Query: 304 IQSITRYWINI 314 + + I Sbjct: 309 ATRLPGGAVII 319 >UniRef50_Q2KZD9 Putative transmembrane sensor protein (Fragment) n=4 Tax=Bordetella RepID=Q2KZD9_BORA1 Length = 339 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 84/323 (26%), Positives = 145/323 (44%), Gaps = 25/323 (7%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQV-----ENLRNQLGGV----- 63 W +L R + + A + W E +++ AWQQV ++ +LG Sbjct: 15 DQVIDWLLLLRSGRATRRDYANFMAWREASPEHESAWQQVSHTLGNSMAGRLGDAYPLGY 74 Query: 64 ---------PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQ---LWQSETGEGLRADY 111 P A + RR + L L A G + + AD Sbjct: 75 QRTPSSPVAPAQTHHPAHEEAAPPRRRFLASALALTAAAGAGALMAIRDFYPLSSVAADT 134 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 TA G R QL DG+ L L+ +S ++ F A R + L G +++ TA D RPF V Sbjct: 135 ATATGERRRYQLTDGTELLLDARSRVNLEFTATSRRLMLLEGAVSV-TAPDDPNRPFVVE 193 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T +G + + G + VRQQ T + + ++++ + + + G +F A+ A Sbjct: 194 TAEGLVQSNGKRYMVRQQVRRTLVVAHEG--DLVVETVDGARGHIPQGFGARFDAARLDA 251 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 +P +W ++ + +PL E++A L YR+G LR A GL ++G +PL ++DA Sbjct: 252 ARPELAAEAAWEGGWINANGRPLAEIVAALRPYRHGTLRVSMAAGGLPVTGMYPLDDSDA 311 Query: 292 ILNVIAQTLPVKIQSITRYWINI 314 L +++ +P+ IQ +T +++ I Sbjct: 312 ALQALSERMPIAIQRLTPWFVAI 334 >UniRef50_Q07HV9 Putative FecR n=2 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07HV9_RHOP5 Length = 333 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 75/325 (23%), Positives = 129/325 (39%), Gaps = 23/325 (7%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG---------- 61 R A W L+ ++P+ A ++W ++ A+ + + L + G Sbjct: 11 VEREAIDWLERLTSGEMTPEDVAALKRWLAHSARHEAAFVEAKRLWHMAGVAGHSLFDPD 70 Query: 62 -GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG-----EGLRADYRTAK 115 G G + + + +RR V+ G L A + ++ G LRADYRT Sbjct: 71 AGFAGRLEALGQRRKKASRRAVLSGGGAALAAASVYGMFNPPLGLWPSLSELRADYRTGT 130 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRF-DAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G D + LNTQ++ VR D + + L GE + T A RP VL Sbjct: 131 GEQRHVTFADDVTINLNTQTSLAVRPTDGAEDRIELIAGEASFATPARA-ARPLVVLAAD 189 Query: 175 GQLTALGTEFTVR--QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 G+ F VR + V A V + P + G+ ++++ S V Sbjct: 190 GRTITQSGRFDVRFAAGGERAPVSVTCFAGAVRIERGPD-VTDLQPGQRVRYNHSGLSEV 248 Query: 233 KPLDDESTS-WTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTD 290 +D + S W + I+ F PL E + + RYR G + + ++ +LSG F + + Sbjct: 249 AAVDPQVASEWQRGIVEFRGTPLVEAVEEINRYRPGRIMLMNASLGHKQLSGRFRIDQMN 308 Query: 291 AILNVIAQTLPVKIQSITRYWINIS 315 L + + K+Q + + +S Sbjct: 309 EALLGVERAFGAKLQRLPGGIVLLS 333 >UniRef50_A4C3P5 Putative regulatory protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C3P5_9GAMM Length = 348 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 72/340 (21%), Positives = 124/340 (36%), Gaps = 34/340 (10%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN + R + A++W +L E S Q + +Q W EQD +Q A+ +++ + Sbjct: 1 MNKITIPERNRIADEAANWLLIL-DEDNSKQTQQAFQVWLEQDAHHQQAFSKLQIMWGLA 59 Query: 61 GGVPGDVASRALHDTRLTRRHVM-------------------KGLLLLLGAGGGWQLWQS 101 +P D + T + LL+ + Q Sbjct: 60 VDLPTDCLTELPQPITRTWWQTLRHTIKNRLALTPLIWPVGSAAFALLVATFSFIAINQP 119 Query: 102 ETGEGLRAD----------YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLW 151 + + Y+T + L DGS +TL S V F +R + L Sbjct: 120 QQIDNTLTTQIVAIEDPIIYQTTTASHQSWLLADGSQITLGADSKISVVFKPKKRAIELL 179 Query: 152 YGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA 211 G AKD +RPF V TA+GTEF V+ + + V + V V+ A+ P Sbjct: 180 QGIAVFKVAKDP-KRPFVVSHHGHSATAIGTEFVVKAHLSHVSVAVLEGKVAVMAANNPN 238 Query: 212 QKRIVNAGESLQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRN-GVL 269 + GE + +P + + W +L + D PLGEV+ + R+ + Sbjct: 239 G-LTLELGEQAELDQHSPLTKQPYNLQQELEWQSPLLEYHDVPLGEVLHDIRRFTTLNIY 297 Query: 270 RCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 D +A + SG + L+ + + + + Sbjct: 298 LADNDIAAYKYSGQIHHDKVEQWLSALPHLYQINLVKVDN 337 >UniRef50_B4WBG4 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBG4_9CAUL Length = 331 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 124/312 (39%), Gaps = 12/312 (3%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 R A+ W+A L+ +RV+ + QW N A+ ++E + G + GD AL Sbjct: 12 REAASWFATLNQKRVAASDITAFSQWRRT-PANAEAYARIETMWEAAGSLKGDADIAALT 70 Query: 74 DTRLTRR--------HVMKGLLLLLGAGGGWQLWQSETGEGLRA-DYRTAKGTVSRQQLE 124 R + KGL+ + + T R Y T G L Sbjct: 71 AGARARADASRKLQGRLAKGLIPIGAVAAVAAVVVGVTMWSARPLSYETGLGERRIVVLA 130 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DGS +TL+T+S VR +R V L G+ D RPF V +TA+GT F Sbjct: 131 DGSKVTLDTESRITVRLTGRRRAVELASGQAFFDVEGDP-ARPFVVRAGATDVTAVGTRF 189 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 VR+ Q+ + + V+V+ + + G+ + ++ TSWT Sbjct: 190 DVRRAGGGAQVTLVEGKVDVVDRGQATPRWSLAPGQQIVTASPRPAVRSVDAASETSWTS 249 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L F+ + +A + RY + D PA+A + +SG F + + ++ + + PV Sbjct: 250 GRLIFAGDTVEAAVAEVNRYTASKVVLDAPAIADIAVSGAFNTGDVEGFVSALTELYPVV 309 Query: 304 IQSITRYWINIS 315 I I Sbjct: 310 ADRTASGQIVIR 321 >UniRef50_D1B2C8 FecR protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B2C8_SULD5 Length = 319 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 128/321 (39%), Gaps = 26/321 (8%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MNP L + AS++ + + +Q+ + W +Q ++ A++ V+ L + Sbjct: 1 MNPTLD-------KEASYFLTCMKDG-FTQEQKEAFALWIKQSPLHEKAFEDVKKLTSFY 52 Query: 61 GGVPGDVASRALHDTRL--------TRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRAD 110 +P + + + RR V+ LL+ ++ + + Sbjct: 53 RALPQNKQTEVIEHVHAEIKRERIFKRRRVLAMAASLLIFFCAISYERYLAFFVPHH--- 109 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y T K L D S + L+ ++ A +R + +R V L G++ ++ K+ +PF V Sbjct: 110 YSTQK-ERQHIILPDDSTVLLDAKTKASIRCSSSKREVLLEKGKVLLSVTKNP-DKPFWV 167 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF--SASE 228 T + LGT F V D+ + V + V V + GE L + ++ Sbjct: 168 QTGGISIKVLGTRFEVEHYDDHVDISVLEGIVSVQ-KGEEHLLATLTKGEKLSYLATSDR 226 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN 288 K + SW + +L F ++ L I + Y + + P + R+SG+F + Sbjct: 227 ILLQKVAPEMIASWKEGVLRFQNETLYSAIDAFSYYHDLNISLQPELENQRISGSFAIDE 286 Query: 289 TDAILNVIAQTLPVKIQSITR 309 D L +++ + ++ I Sbjct: 287 VDKFLYALSKIYTLNVRKIGD 307 >UniRef50_B4RTZ4 Putative regulatory protein n=2 Tax=Alteromonas macleodii RepID=B4RTZ4_ALTMD Length = 351 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 128/340 (37%), Gaps = 35/340 (10%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRN------QLG 61 S+ A W + L S ++ W + ++ A + +L + +L Sbjct: 9 SKEDIQEQACLWISRLDRGLKSE-EKTELDAWLSESNAHRQALLEAASLWDDMSVLNELS 67 Query: 62 GVPGDVASRALHDTRLTRRHVMKG-----LLLLLGAGGGWQLWQSETGEGLRAD---YRT 113 G+ SR + M G L++ + G Q + A +T Sbjct: 68 GLFPQPTSRQSAKKHSVSKSAMWGIAATFLVMAIAVGVVVQRTWLDATPEFAAVSQKVQT 127 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 G L DGS + LNT S V F + R + L GE A D RPF V Sbjct: 128 GVGEQKNVTLADGSKMHLNTNSVVTVDFSSAVRNIVLLKGEAHFEVAHDKT-RPFSVTAG 186 Query: 174 QGQLTALGTEFTVRQ-QDNFTQLDVQQHAVEVL---LASAPAQK-----------RIVNA 218 +TA+GT F ++ DN +L V V V ASA Q ++ A Sbjct: 187 NNTVTAVGTAFNMQYVDDNAFELVVTDGKVLVKDRFKASASNQSLFTKRPVADEGLLMFA 246 Query: 219 GESLQFSA---SEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPA 274 GE + + + D+ +W + ++ F +PL V+A + RY D + Sbjct: 247 GEKAKVQGKVEARESLSQNDIDDDLAWQQGMIVFKGEPLDAVLAEIGRYTPVRFHISDES 306 Query: 275 VAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 + R++G F + + D +L+ + + + + +T I + Sbjct: 307 LRKRRVAGYFKVGDIDGLLSALKSSFNINYEKVTDTSIEL 346 >UniRef50_Q13G72 Putative FecR n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13G72_BURXL Length = 318 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 97/310 (31%), Positives = 142/310 (45%), Gaps = 9/310 (2%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP---GDVA 68 AL +A W L+ S + + W ++Q AW +E + G A Sbjct: 10 ALDAAIRWAVRLAAGNASEAEFREFLDWKAAAVEHQLAWGSIEQQLHLFSSARERDGGTA 69 Query: 69 SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG--EGLRADYRTAKGTVSRQQLEDG 126 RAL TR++RR +++ L + G G + L AD T G + L D Sbjct: 70 HRALAATRVSRRKLLRDALATVAVVGVVGAAVRRFGLFDSLYADVATDVGARRQLSLADN 129 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 S+L L+ +SA DV F +R +RL G + + A+D+ RPF V TR G +ALGT F V Sbjct: 130 SMLVLDARSAVDVNFGERERAIRLLEGRLFVRVARDS-ARPFVVYTRDGSFSALGTAFGV 188 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP-LDDESTSWTKD 245 ++L V AV A+ V A + A V+ D +W K Sbjct: 189 GLSSEGSRLAVTHSAVRARCAA--GATLDVVASQVATLRAGAQPVVERWHADSEVTWMKG 246 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 ++ D+PL EV+ +L RY G + VA L++SG FPL + + IAQTLPV + Sbjct: 247 YVTIVDRPLHEVVESLNRYVRGFISMSDDVAALKISGLFPLDDAQMAIRQIAQTLPVIVT 306 Query: 306 SITRYWINIS 315 T Y+I I+ Sbjct: 307 YHTDYFIRIT 316 >UniRef50_B0SYA7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0SYA7_CAUSK Length = 325 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 78/313 (24%), Positives = 122/313 (38%), Gaps = 18/313 (5%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 + +A W L G+ V+ + W + A+ +L + +A RA Sbjct: 8 IEAAIDWLVRLQGDAVTESDWRDFDAWLTASPAHAEAYDAALAFDQRLD-LDARLADRAS 66 Query: 73 HDT---------RLTRRHVM--KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 R TRR + + G L A Y T G Sbjct: 67 ESAPPVAKVIPLRPTRRAWLWPAAAAVAATFVAGAVLLPGALMGEREATYVTGVGEHKTI 126 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 LEDG+ + LN S VRF+ H R VRL E AKD +RPF + Q+ +G Sbjct: 127 ALEDGTRIELNAASRLTVRFERHARRVRLGDAEAFFDVAKDP-RRPFLIEAGDTQVRVVG 185 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLA-SAPAQKRIVNAGESLQFSAS---EFGAVKPLDD 237 T+F VR++D + VQ+ VEV + A + G+ L + D Sbjct: 186 TQFDVRRRDGRVAVAVQRGLVEVRPDLQSGATPFRLRPGQGLSHEEGRADDARVAAVAVD 245 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVI 296 E W + L + D+PL E++ L R ++ D A +RLSG + A+++ + Sbjct: 246 EVMGWRQGRLIYRDRPLSEIVRDLNRLFPRPVKLGDDRAADMRLSGVLIVDEQGAMVDRL 305 Query: 297 AQTLPVKIQSITR 309 + LPV+ + Sbjct: 306 SHLLPVRTTTTDD 318 >UniRef50_Q6FD18 Putative transmembrane sensor n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FD18_ACIAD Length = 324 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 135/323 (41%), Gaps = 14/323 (4%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + ++ + A+ W +LS S R +QW +Q ++ +++++ Q+ + Sbjct: 1 MPNPDQKIIIEEAAKWLVILSSGDYSQNDLDRLEQWKQQSHEHLKTFEELQQFLGQMDVL 60 Query: 64 PGD--------VASRALHDTRLTRRH--VMKGLLLLLGAGGGWQLWQSETGEGLRADYRT 113 V + L T+ R V+ L++ W + Q + AD+ Sbjct: 61 KSQNLQSQHPLVQNNILRKTKTKARTAPVLWSGSLIIAVIAIWAVSQ-LPYQRWNADHSI 119 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 + L D S + + Q+A ++R+ ++QR + L G I + KD RPF + Sbjct: 120 EAQQWQQNILSDQSSVQMAGQTAYNLRYSSNQRKIDLVEGNILVDVTKD-HARPFVIDLG 178 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 Q+ ALGT+F V + ++ + + + + ++ AG+S F+ + K Sbjct: 179 DIQVQALGTKFIVNYNHDQIRVSMIESKTRIYSVHHRFEPIVLQAGQSFNFNGHDVQVEK 238 Query: 234 -PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDA 291 D +W + L +D L +V+ L Y++ + ++ R++ PL + D+ Sbjct: 239 INPDILQKAWQRKKLVVNDMSLDQVLDLLESYQSSKFIYNRKSLTKYRVNAVLPLDDPDS 298 Query: 292 ILNVIAQTLPVKIQSITRYWINI 314 + ++ L + + ++ + I Sbjct: 299 AIQLLKDQLDLNVYTVGQLLTVI 321 >UniRef50_D1NXK1 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1NXK1_9ENTR Length = 318 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 14/314 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M ++ + A+ W + + ++ Q+E +QQW + ++ A+ + L Sbjct: 5 MESQYSNKPSEIEEVAAFWVIKTTQKNLTSQEEHEFQQWVTTSEQHRNAYFKARQLWGLT 64 Query: 61 GGVPGDV---ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 G+ V +SR + + R + L+ + + +W + E + DY+ G Sbjct: 65 SGIALSVQKGSSRKTGNIKFAPR-WIAMASALILSVFSFAIWSFLSQESV--DYQAKNGE 121 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQG 175 + L DGS + L++ +A + F+ R V L G + A + Q RPFRV G Sbjct: 122 ILHIILPDGSQVDLDSGAAITLEFNEGYRQVNLHSGRAYFSAAPISTQEPRPFRVKANNG 181 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 + ALGTEF + Q+ + V +H V++ L S Q+ I AG+ + V Sbjct: 182 TVQALGTEFEIDTQEKQVNVAVYEHQVQITLLSGETQRVI--AGDQASYQQHISPMVPAN 239 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYR--NGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 SW K ++ F + VI L+RYR +L +P A +SG F + + + L Sbjct: 240 IQHGVSWRKGLIIFQQSSVDHVIHELSRYREKPIILLGNPPQA--MISGVFQIDSVENAL 297 Query: 294 NVIAQTLPVKIQSI 307 + + + + + Sbjct: 298 LTVTSSKGLSVSEL 311 >UniRef50_A5V4S3 Anti-FecI sigma factor, FecR n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4S3_SPHWW Length = 318 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 124/310 (40%), Gaps = 18/310 (5%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 ++ +Q A+ W A + P +EA + W D A Q + + L Sbjct: 4 ETAQQIEDKAADWVARMHSATWGPDEEAELKLWLAADPRRDGALLQAQAALSMLTSADTG 63 Query: 67 V---ASRALHDTRLTRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 + A RL+RR M G + G +++ + Y T G + R Sbjct: 64 IFGENPPAEPRRRLSRRSFMGFGGAAVAASLGVAAVVFRGTS-------YVTDVGEIRRI 116 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 L DGS +NT SA + +R V++ GE AKD ++RPF V + ++ A+G Sbjct: 117 PLADGSTAAINTDSAIAINLQRSKRLVKVDKGEAWFQVAKD-VERPFEVEAGRIRVRAVG 175 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD----D 237 T F+VR+ + + V + V+ A Q ++AG+ + P + D Sbjct: 176 TAFSVRKLETGAGILVTEGTVDAWADGAEGQMIRISAGDGAFIGNNAAVERVPPEASGVD 235 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + +W + +PL E ++ RY ++ DP + + G F + ++ Sbjct: 236 RALAWRSGKIDLVGQPLSEAVSEFNRYNKRKLVIVDPKLLNEQFDGVFRTDDPAGFAEMV 295 Query: 297 AQTLPVKIQS 306 +L V I + Sbjct: 296 KNSLSVPIDT 305 >UniRef50_B7VA09 Probable transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=B7VA09_PSEA8 Length = 318 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 78/316 (24%), Positives = 129/316 (40%), Gaps = 11/316 (3%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG-----G 62 R++ + A W L S + ++W ++ ++Q+ L G Sbjct: 6 ERQRIVEEAIEWMVRLQSGDFSAAEGDALERWKALSSEHAEVFRQLLGSLAPLQDSPWRG 65 Query: 63 VPGDVASRALHDTRLTRRHV--MKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 P RAL RR V GL +LL G G + W + G GL + T G Sbjct: 66 QPSATVLRALEQPSSRRRFVGGALGLFVLLAGGAGLERW-VQAGMGLPGELATGTGERRD 124 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS L LN +S A D QR + L G + + +D F + G++ Sbjct: 125 WLLADGSRLRLNARSKARPLLDGAQRRLELRRGAMRLEVKEDPRG-AFALDCAAGRVDCA 183 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 + ++ +L + + L + ++ V A SL F A P+ Sbjct: 184 SGSLLLAEERGAIRLVTLRGS--ARLTTGEGRQLAVAARRSLLFDAGGLLEQGPMQAGED 241 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +W L D+ L V Y G+L+ D +AG R+SG FPL + L+++ ++L Sbjct: 242 AWASGWLEVHDRSLAWVAEAFRPYLPGILQLDAEIAGNRVSGLFPLDDMHTSLDMLGRSL 301 Query: 301 PVKIQSITRYWINISP 316 P+++ + YWI++ P Sbjct: 302 PIRVLRYSDYWISLRP 317 >UniRef50_UPI00016A4649 FecR family protein n=2 Tax=Burkholderia RepID=UPI00016A4649 Length = 221 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 83/215 (38%), Positives = 122/215 (56%), Gaps = 4/215 (1%) Query: 105 EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL 164 L AD RTA G L DG+ + LNT +A DVRFD R VRL GEI +T+ DA Sbjct: 3 ARLGADVRTAVGERRAITLADGTTVILNTDTAIDVRFDDTTRRVRLRRGEIMVTSGHDAA 62 Query: 165 ---QRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGES 221 RP + T G + +GT F+VR++ + T++DV AV + A +V AG Sbjct: 63 RAAARPLVIATAHGDVRPVGTRFSVRERGDATRVDVFDGAVRITPLRATGVAPLVAAGRR 122 Query: 222 LQFSASEF-GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRL 280 F+ G + ++ + +W IL S+ L +++A + RYR G +RCD VA LR+ Sbjct: 123 ADFTRDALAGPPRAIEGGAGAWADGILVASNLRLADLLAEVDRYRPGRVRCDATVANLRV 182 Query: 281 SGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 SGT+PL +TD IL+ + +TLPV ++ +TRYW+ + Sbjct: 183 SGTYPLDDTDRILDTLRETLPVDVEYVTRYWVTVV 217 >UniRef50_B6QYF1 FecR protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QYF1_9RHOB Length = 331 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 75/326 (23%), Positives = 125/326 (38%), Gaps = 18/326 (5%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + +A W+ +L + + W+ QD +Q AW +V LG + Sbjct: 9 EISSTVEDAAISWFILLGEYPEDLKLWEEFDDWFLQDPTHQEAWLKVSQTSEVLGQLELS 68 Query: 67 VASRALHDT-------------RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRT 113 + ++ G LL G + Q T L AD++T Sbjct: 69 STEQGSKQGIDVEPAFAFQNFFARSKMFFAAGFSFLLLLYIGLTVPQHLTV-WLYADHKT 127 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 +LEDGS + L+ SA D+ F R V L GE +D +RPF V Sbjct: 128 EVAQTKEVELEDGSTIYLSAYSAIDLDFTDEMRKVSLLRGEALFDVDRD-EERPFVVTAG 186 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 LGT F V + + + V+ V+V +S + + + ++ ++ Sbjct: 187 DTTTKVLGTRFNVNKGLSAVSVGVEHGHVQVAGSSDVNEVIELRDADWVRMHEDGHPDIR 246 Query: 234 PLDDEST-SWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDA 291 + E +W + L D+ EV+ L R+ + VL DP + R++G F L Sbjct: 247 SPNAEYIAAWQRGKLYVDDQSFEEVLFKLRRFMKTPVLVLDPRINSKRVTGVFDLSKPRQ 306 Query: 292 ILNVIAQTLPVKIQSITRYWINISPL 317 LN I VK++ ++I IS + Sbjct: 307 SLNAIVAAHTVKLRDF-DFFITISKI 331 >UniRef50_Q1I5S1 Putative FecR-like transmembrane sensor n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I5S1_PSEE4 Length = 320 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 81/311 (26%), Positives = 136/311 (43%), Gaps = 13/311 (4%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQE--ARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + + + ++ A + A L G+ ++ + Q+W + +++ AW++ E + Sbjct: 1 MFEQASPRKVQQALVYLAALQGDDPERVRQLGDQAQRWRGRSDEHERAWREAEQRWQMVH 60 Query: 62 GVPGDVASRA-LHDTRLTRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT- 117 + + S H RR +++ G L L+ GGW W + + +TA Sbjct: 61 RLTPQLRSAVQPHACDTGRRRLLRQGGALALVLGAGGWLGWMFKRTAPFQYGLQTAHAEA 120 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 L DGS L + +S V FD +R V L +G A + RPF V TR G + Sbjct: 121 PRSLTLPDGSQLLVAAESNLRVHFDHGERRVMLLHGNAFFDVAHELW-RPFLVSTRLGLV 179 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE----FGAVK 233 LGT FTV + + Q+ V + V+V Q ++ AGE + A Sbjct: 180 QVLGTAFTVSDRGDRVQVAVARGRVQVRGLEGGEQ--VLQAGERICLDGQGQLGTLRAGG 237 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 + W + SF+D+PL EVI L Y + DP + LRL+G+FP + +L Sbjct: 238 AFGPDLAHWQRGWWSFTDQPLSEVIGELNAYVTRPVALDPGASALRLTGSFPSDQPEVLL 297 Query: 294 NVIAQTLPVKI 304 + + LPV++ Sbjct: 298 EALPRVLPVRL 308 >UniRef50_A6T0L2 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0L2_JANMA Length = 333 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 131/323 (40%), Gaps = 29/323 (8%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP-----GDVAS 69 A W L ++W + A++Q + + ++L GD Sbjct: 16 QAHAWLRRLKSGSARAADAQALRRWCATSAAHARAFEQAQRMWDELLPAAVLAGTGDAEL 75 Query: 70 RALHD-------TRLTRRHVMKGLLLLLGAGGGWQ--------LWQSETGEGLRADYRTA 114 AL + ++RR M G L A LW S + RAD+RTA Sbjct: 76 TALRNKQSRKQTPGMSRRAFMGGALATSCATIAGVALIHPPLDLWPS-VADAWRADFRTA 134 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVR-FDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 G L G + +NT+SA V+ + L GE+A+ +PF V Sbjct: 135 AGEQREIALASGVSVEMNTRSAIAVQTLRGETIGIDLLDGEVAVDATH--RNQPFVVSAA 192 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 G+ +++ F +R N + V+V ++ + ++ A + + + + A++ Sbjct: 193 GGRTSSIDARFELRHMGNAICVTCIDGMVKV---ASGGDEVVLRAAQQVTYDSQAIQAIR 249 Query: 234 PLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDA 291 ++ ++++W ILSF L +V+A + RYR G V+ +A +SG F +++ D Sbjct: 250 SINPGDASAWRSGILSFRQTALAQVVAEINRYRPGRVVLMAKGMADKPVSGRFHIRDLDK 309 Query: 292 ILNVIAQTLPVKIQSITRYWINI 314 + I + + + S+ + + Sbjct: 310 AITQIQRLFKLDVTSLPGGLVLL 332 >UniRef50_B1J3A1 Anti-FecI sigma factor, FecR n=6 Tax=Pseudomonas RepID=B1J3A1_PSEPW Length = 328 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 136/324 (41%), Gaps = 30/324 (9%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 ++A W A ++ E+ A +Q+W D ++ A+ Q + L + P + H Sbjct: 13 QAALRWLARIN-EQPEVAHSAAFQRWLLADPRHREAYAQAQALWQK-SAAPAARLAEEEH 70 Query: 74 DTRLTRRHVMKG--------------------LLLLLGAGGGWQLWQSETGEGLRADYRT 113 VM L+L +G GGW + L+AD+ + Sbjct: 71 ADLQRYLDVMAKAPAPPRWWRARARALAVAACLVLAVGVAGGWH--PGYWVQDLQADFSS 128 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 + + L D S +TL+ SA V F QR VRL +G PF V Sbjct: 129 TDA-IRQVTLADQSQVTLDAGSAIAVDFQQGQRHVRLLHGAAFFKVTHTGA--PFVVQAA 185 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 GQ+ LGTEF VR+Q Q+ V+ V V A A R + A + L ++ + G Sbjct: 186 GGQVRVLGTEFEVREQAEGAQVTVRNGRVAVTPAQGQAA-RELTANQQLAYARGQAGDTA 244 Query: 234 PLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDA 291 +D D +W + +++ PL +V+ L RY G ++ D + ++SG+FP++ A Sbjct: 245 SVDSDSRLAWRQGWVNYYQVPLAQVVGDLGRYYPGRIVLLDSELGQRKVSGSFPVREPLA 304 Query: 292 ILNVIAQTLPVKIQSITRYWINIS 315 L+ + + + Q++ I Sbjct: 305 ALDSLGKVMGFSRQTVLGRLTVIR 328 >UniRef50_Q1YSL3 Putative regulatory protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSL3_9GAMM Length = 348 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 136/332 (40%), Gaps = 36/332 (10%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + DSR + L A W A L +S E Q W D +N+ + Q+ + +++ + Sbjct: 5 HILDSRDRRLNEAGLWIAKLDKG-LSKDDEKSLQHWLAVDAENREVFLQMAEMWDKMDML 63 Query: 64 P--GDVASRALHDTRLTRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRAD--------- 110 ++ + R R V+ +L+L G W + +A+ Sbjct: 64 SRLSELFPKTPEKQRRPVRSVLAIAASVLILTVVGLWGMMGISPDISGKANISELAVVGG 123 Query: 111 -YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 Y T+ G S L DG+ L LNT S + + +R + L GE+ + A+D + RP Sbjct: 124 IYETSVGEYSIVTLPDGTELVLNTNSLVRMNYTDQRRILLLERGEVHVKVARD-ISRPLS 182 Query: 170 VLTRQGQLTALGTEFTVR-QQDNFTQLDVQQHAV-------------EVLLASAPAQKRI 215 + ++ A+GTEF V D +L V + V E+LL + P+ Sbjct: 183 LFAGTQEIRAVGTEFNVEINSDQKIELVVTEGKVLVGVHQQMTKDETELLLVNLPSSTTS 242 Query: 216 VNAGESLQFSASEFGAVKPLDDESTS----WTKDILSFSDKPLGEVIATLTRYRNG-VLR 270 V+ GE++ +++ V + E + W + L F + L + + RY + Sbjct: 243 VSEGEAIILGSAD-EEVDEISPEEIAVKLSWQQGNLIFRGESLAAAVDEIGRYTTVEFVI 301 Query: 271 CDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 D + LR+SG F + D +L + + + Sbjct: 302 LDENLKKLRISGLFKAGDVDGLLTTLEENFNI 333 >UniRef50_A4ABA5 Fe2+-dicitrate sensor, membrane component n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABA5_9GAMM Length = 357 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 124/337 (36%), Gaps = 34/337 (10%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP--GDVAS 69 L AS W A + + +S QW + + A + + + L + D+ Sbjct: 13 ILDQASAWVAKMVADTMSEADREALDQWLAESPAHSKALLECADTWDDLDELAQLADMFP 72 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADY-------------RTAKG 116 R T + G G G + L Y TA G Sbjct: 73 RKQPQKVSTTTPTVSTWFPSKGFGLGAIAASAVFAAMLILIYPGTDQPSTYVHQTVTAVG 132 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQ--RTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 L DGS LNT S + FD R V L GE D RPF V Sbjct: 133 EYRTAVLPDGSKAMLNTDSQIEATFDPDDAIRRVALIKGEAHFDVEPDP-SRPFVVEVGD 191 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK-----------RIVNAGESLQ 223 ++ A+GT F V ++ V + VE+ + +A + AG+ Sbjct: 192 TRVVAVGTAFNVDSSSGRLEVTVTEGIVEIHVGAAEVASPGRTQLQHERGQQFKAGQIAI 251 Query: 224 FSASEFGAV----KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGL 278 S + +V P + W + + F +PL +V+ L+R+ + + D V + Sbjct: 252 ISKHQIESVGFVEAPEIERKLLWQQGKVQFVGEPLSQVVRELSRHTHYTFKFSDTQVGDI 311 Query: 279 RLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 R+ G F L + D +L+V++ + ++++ T I+++ Sbjct: 312 RVGGYFQLGDIDELLDVLSGSFNIEVKRDTAGVIHLA 348 >UniRef50_C7JHQ5 Two component sensor histidine kinase FecR/PupR n=8 Tax=Acetobacter pasteurianus RepID=C7JHQ5_ACEP3 Length = 325 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 72/326 (22%), Positives = 132/326 (40%), Gaps = 16/326 (4%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 D ++A A W +L+ E +++W + + AWQQV + + + P Sbjct: 1 MDESQKAEAEAIDWSLLLNEEPDDQALRHEFEKWLSEKPAHAIAWQQVTAISDIIRSAPP 60 Query: 66 DVASRALHDTRLTRR------HVMKGLLLLLGAGGGWQLWQ-------SETGEGLRADYR 112 + + R + K LL G+G + AD Sbjct: 61 NRQVAPVRPVAFQSRIQALLVFLQKRWRLLFGSGVAATALCAALLLIIPDLITRFLADQY 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 GT L DGS + L +SA ++ A +R + L GE T RPF V Sbjct: 121 APAGTTRTLHLADGSDVVLAPRSAISIQISAQERHIDLIQGEAFFTV-HHENSRPFIVQA 179 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 + + +GT F ++ + T + V+ V + ++ R ++ GE + S ++ G Sbjct: 180 GKVRAQDIGTAFDIQIAHHETTVRVRDGVVHIAASTPRIYARDLHGGEWARVSDTDIGDG 239 Query: 233 KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDA 291 + +W + +L + +G++I L + ++ A+ G R++G + L+N DA Sbjct: 240 TLPPETVGAWKEGVLIARNDKVGDMITALRPWSGKRIVVMKQALLGKRVTGVYDLRNPDA 299 Query: 292 ILNVIAQTLPVKIQSITRY-WINISP 316 L +I L KI +T + + +SP Sbjct: 300 ALRLIVSPLGGKIIHVTPWANLVVSP 325 >UniRef50_B4S0Z9 Putative regulatory protein n=2 Tax=Alteromonas macleodii RepID=B4S0Z9_ALTMD Length = 368 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 84/354 (23%), Positives = 137/354 (38%), Gaps = 43/354 (12%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 N + +S + L AS W L E + ++ + W ++ + ++ L +++ Sbjct: 18 NVVQFNSDERVLDVASEWLVKL-DEGLDNEEMQALKTWL-ATPLHRDTFLEMVALWDKMS 75 Query: 62 GV-------PGDVASRALHDTRLT----RRHVMKGLLLLLGAGGGWQL-----WQSETGE 105 + P A H T T R + +L++G L Sbjct: 76 VLSELADIVPHTPEPNAKHKTNSTVAWKRPLAIAASILMVGLLSYQGLNLFSPSNQTEPV 135 Query: 106 GLRADYR----TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK 161 A Y T G LEDGS L LNT S ++ F R ++L GE+ I AK Sbjct: 136 AQMASYSLQASTKPGEHKSISLEDGSTLWLNTNSQVNIAFTDTSRIIQLVKGELHINVAK 195 Query: 162 DALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL---------------L 206 D RP VL + A+GT F V+ +L V + VEV + Sbjct: 196 DK-SRPLNVLAAGKAIQAVGTAFNVQYHRGDLELVVTEGVVEVASYTLNKANGESIVNPI 254 Query: 207 ASAPAQKRIVNAGES--LQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTR 263 A+ + GE L S V D SW + + F +PL +VI ++R Sbjct: 255 IKPQARPLTLVQGEKSLLSLPNSTVETVSDKDIANDLSWREGKIVFRGEPLIDVIEEVSR 314 Query: 264 YRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 Y + V+ D A+A ++++G F + DA++ +A L + + I + P Sbjct: 315 YTDKTVVLGDAALANMQVAGLFNTNDVDALIAALADNLQISTDYSSDT-IVLRP 367 >UniRef50_Q4KE34 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KE34_PSEF5 Length = 324 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 78/330 (23%), Positives = 136/330 (41%), Gaps = 21/330 (6%) Query: 1 MNPLLTDSRRQALR-SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M L+ A+R AS+W+ + R++QW + A++ +E+L Sbjct: 1 MTEHLSALPGDAIREQASYWFTQREAMTHNLPLRQRFEQWRNSHAQHAEAYRALEDLWQA 60 Query: 60 LG------------GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGL 107 +P A R R + +L+ G GW + L Sbjct: 61 SAFEQALEQLALGLDLPAAPAPATPRRKRHRTRWLAAAATVLVMLGAGWF---GDLPLRL 117 Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP 167 +AD+ +A G + R L DGS + L + SA F +R ++L GE+ + D RP Sbjct: 118 QADHLSAVGELQRFDLADGSHIVLGSDSAISSDFSNARRRIQLLRGELYVEAFHDP-SRP 176 Query: 168 FRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS 227 + +T +GT F+V +Q + + V++ V LA Q+ ++ AG Q Sbjct: 177 LTIEAGSATVTVVGTRFSVSRQADGVTVAVREGRVR--LADENGQQSLLQAGNWQQLQGH 234 Query: 228 EFGAVKPLDDE-STSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFP 285 + P E SW LSF D PL +V+ L RY R +L + A ++SG + Sbjct: 235 RLLPLNPEGSERQLSWINGRLSFQDAPLAQVLQELGRYHRAPILLFNADAAQQKVSGNYQ 294 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINIS 315 L + AI+ +++ ++ + + + Sbjct: 295 LDDPQAIVRALSKVTATELTRLPGGILVLR 324 >UniRef50_B1J6G1 Anti-FecI sigma factor, FecR n=2 Tax=Gammaproteobacteria RepID=B1J6G1_PSEPW Length = 309 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 97/320 (30%), Positives = 152/320 (47%), Gaps = 19/320 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M +R+A W L + + +++ W D ++ AWQ+++ + Sbjct: 1 MTAAPERLPEAIVRTAIEWQMRLRASPGNVEVFSQFNAWRLCDTRHELAWQRMQQVSGHF 60 Query: 61 --GGVPGDVASRAL---HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 G +P + A+ D L+RR +K L L L AGG L + R+D T Sbjct: 61 HNGHLPDATCTAAVLRQADIDLSRRRTLKLLGLGLTAGGATLLIGTAP-PAWRSDVTTGV 119 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G + +L L LNT SA D+ H R +RL GE+ + A +RV +QG Sbjct: 120 GEQRQLRLNGDIQLQLNTDSAVDL----HGREIRLRSGEMLVDGAD------WRVRCQQG 169 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 +R++D +++L V++ V V A+ ++ V AG L + ++ Sbjct: 170 VCDGHQARAVLRERDGYSELHVERGEVLVTAAAG---RQRVQAGSGLALYPTRLASLDAG 226 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W++ +L +D PL + +A RYR G LRCDPAVA LRLSG F L A+L+ Sbjct: 227 VLDPFAWSRGLLIVNDIPLADFLAEAARYRRGWLRCDPAVADLRLSGVFHLDQPGALLDN 286 Query: 296 IAQTLPVKIQSITRYWINIS 315 IA LPV+I TR+W+ IS Sbjct: 287 IAHLLPVRIDQRTRWWVRIS 306 >UniRef50_Q4K5N6 Sigma factor regulatory protein, FecR/PupR family n=10 Tax=Pseudomonas RepID=Q4K5N6_PSEF5 Length = 337 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 142/320 (44%), Gaps = 24/320 (7%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP--G 65 R +A+ W L +S ++A+ QW D + A LG + Sbjct: 7 QERSITEAAADWAVRLYAGGLSATEQAQLAQWQAADPRHPQALVFARQTWEALGELRLDP 66 Query: 66 DVASRALHDTRLTRRHV-------------MKGLLLLLGAGGGWQLWQSETGEGLRADYR 112 ++A+ A + R + +L+ A L + L+ADY Sbjct: 67 ELAATAPPRRQAARPAATIPRPRRRRRLVRAASVAMLVLAVALGWLQGPQALLYLQADYL 126 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRV 170 T KG V QL DGS + L++ SA + + +R V+L G A A +RPF V Sbjct: 127 TGKGEVRTVQLADGSQVELDSGSAIRLDYSGDKRQVQLLAGSAVFDVAPMAGEEKRPFIV 186 Query: 171 LTRQGQLTALGTEFTV-RQQDNFTQLDVQQHAVEVL---LASAPAQKRIVNAGESLQFSA 226 + GQ ALGT F V R+ + V QH+V V A A +R++ G+S+++ Sbjct: 187 QSAGGQTRALGTRFVVGRESAQQAWVGVLQHSVAVSLDAPAQRGASERVLQEGQSVRYDP 246 Query: 227 S-EFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGT 283 A+ LD +TSW + +L F +PLG V+ L RYR G V+ + A+A ++SG Sbjct: 247 QSGVVALDGLDLQRATSWRRGVLVFDRQPLGLVVERLNRYRPGRVVLTNSALAQRQVSGV 306 Query: 284 FPLKNTDAILNVIAQTLPVK 303 F L DA L + Q L V+ Sbjct: 307 FRLDMLDAALVTLTQELQVQ 326 >UniRef50_A5V578 Anti-FecI sigma factor, FecR n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V578_SPHWW Length = 339 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 121/318 (38%), Gaps = 19/318 (5%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRN----- 58 + + + AS W + ++ ++ + +W D + AWQ + + Sbjct: 7 IPDPEQDRIDMQASEWVVLQDDRELTAAEQDDFDRWLAADPRHARAWQDLSRTWSTLPVL 66 Query: 59 -QLGGVPGDVASRALHDTRLTRRHV----MKGLLLLLGAGGGWQLWQSETGEGLRADYRT 113 +L + D TR +V + + A L + ++T Sbjct: 67 NKLSELATDPIDVTPEATRHRWGYVRVPKIALGVAGAVAAMVAFLAVGPSLLPQPEVFQT 126 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 L+DGS +TL +S V F +R V L GE D RPF V Sbjct: 127 GVAQTQLLTLDDGSQVTLGPRSRLTVAFADAERRVVLASGEAFFEVTHD-RSRPFLVEAG 185 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKR----IVNAGESLQF---SA 226 +GT+F V D ++ V + V+V A +R ++ AG+ + SA Sbjct: 186 GSTTRVVGTKFDVNYADTSVRVGVLEGRVQVSRADPDPARRPATALLQAGQRAEIRLASA 245 Query: 227 SEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFP 285 ++ V+ +W + L + + L ++++ + RY GV+ D + LR++ +F Sbjct: 246 ADPLIVRLSAPMPGAWRQGRLVYENSRLSDLVSDVNRYYAPGVIVADKGILDLRVTASFK 305 Query: 286 LKNTDAILNVIAQTLPVK 303 A L + LPVK Sbjct: 306 ASEIPAFLASVGTVLPVK 323 >UniRef50_B8H3N4 FecR family protein n=3 Tax=Caulobacter RepID=B8H3N4_CAUCN Length = 307 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 113/305 (37%), Gaps = 6/305 (1%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ--LGGVPGDV 67 + + A+ W A P ++ W D N A++QV L Sbjct: 2 NRIAQEAALWAARRLDADAQPD--PAFEAWKAADPANARAYEQVWRASQDPALSEALRVS 59 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 R R R V+ G LL G ++ +TA G L DG+ Sbjct: 60 EQRRAAPRRAWRAPVLAGGLLACGLAVFIAWPYAQVMTVQPQVIQTAPGQQRVVALADGT 119 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 +TL+ + DVR +R V L GE A DA +RPF V +G LGT F + Sbjct: 120 QVTLDGATRLDVRLGTGRRQVELVRGEAFFDVAHDA-RRPFIVQAPEGSARVLGTAFDLE 178 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 + D +L V++ V + + + G+ AV+ D ++ W L Sbjct: 179 RGDGRLELSVRRGKVRLAPTGVIRRTAELTVGQRAFAKEGRLSAVRTFDPQADDWRTGWL 238 Query: 248 SFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 L ++ L R + + DPA+ R++G F L + +A+ +A I+ Sbjct: 239 ETDGVTLARLVERLNRASDKPITIIDPALGRQRVAGRFRLDDPEALARNLALMHGFTIRE 298 Query: 307 ITRYW 311 + Sbjct: 299 TSNGL 303 >UniRef50_B8L287 Anti-FecI sigma factor, FecR n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L287_9GAMM Length = 384 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 86/338 (25%), Positives = 141/338 (41%), Gaps = 47/338 (13%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP----------- 64 A+ W ++ Q+ ++QW + + A ++E ++LG +P Sbjct: 42 AAAWMVRRQDG-LTSDQQVEFEQWLASNPTHARALARLEGTWDRLGHLPVGVVDALRAGL 100 Query: 65 ---------GDVASRALHDTRLTRRHVMKGLLLLLG-----------AGGGWQLWQS-ET 103 A R RR + ++ G W W + + Sbjct: 101 PSPVASAADPSRAQRPAPQVPRRRRSWRPAVSRVISRAAAAAIAFAAMGTAWIAWNAWQR 160 Query: 104 GEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA 163 + TA+G +R +L DGS L L+T + ADV R VRL G++ D Sbjct: 161 APIFEQSFATARGEQTRVELPDGSTLWLDTATRADVSLYRTHREVRLSTGQVFFAVHPD- 219 Query: 164 LQRPFRVLTRQGQLTALGTEFTVRQQD------NFTQLDVQQHAVEVLLASAPAQK---R 214 + PF VL ++T +GT F+VR+ + V+Q V V A A++ Sbjct: 220 REHPFNVLVANTRVTVVGTRFSVRRTGSALGGSGEVSVAVEQGHVRVAKAQDMAEQGAAV 279 Query: 215 IVNAGESLQFSASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCD 272 + AG+S+ A G P+ E TSW +SFS L + +A RY + G++ D Sbjct: 280 DLLAGQSVIVGAG--GKPGPVGSEVDTSWRDGRISFSGTRLDQALAEFERYGDTGLVIHD 337 Query: 273 PAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 PAVA L++ G+F L+ A + Q LPV++ + R+ Sbjct: 338 PAVAALKVQGSFNLRRAGAFARALPQVLPVRLDARGRH 375 >UniRef50_C5SN43 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SN43_9CAUL Length = 325 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 8/296 (2%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHD 74 A+ W A L + P+ EA +++W E D Q+ + + ++ L +R + Sbjct: 25 EAAVWMARLKSDCRLPETEAAFRRWLEVTPDAQFLFDEATDVWEMLPSAVPTRRARLVSP 84 Query: 75 TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQ 134 ++RR + G + + + Y T KG L D S++TLNT Sbjct: 85 V-MSRRMALVGAMAAAVVVTVGGGVYAVNLRPVV--YETQKGEQRSMSLTDTSMVTLNTD 141 Query: 135 SAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQ 194 + VR+ ++R V+L GE A D L RPF V TR ++TALGT F VR Q Sbjct: 142 TKLSVRYSRNRRYVQLERGEAVFQVAHD-LSRPFVVETRNQRVTALGTVFLVRSDPTEVQ 200 Query: 195 LDVQQHAVEVLLAS--APAQKRIVNAGESLQFSASEFGAV-KPLDDESTSWTKDILSFSD 251 + + VE+ + + I+ GE V +P D +W + + FS Sbjct: 201 VALFSGKVELRAKQKVSASNGMILKPGERATVREGMTPVVDRPPSDVIRAWQRQEVVFSG 260 Query: 252 KPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 L E + L RY ++ D VA L+++G F N++A + +A+ +K++ Sbjct: 261 VTLAEAVNELNRYSRLQIVVADSGVASLKVAGVFQTGNSEAFVRSMARIHGLKVRQ 316 >UniRef50_B0SVT6 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0SVT6_CAUSK Length = 324 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 127/320 (39%), Gaps = 12/320 (3%) Query: 1 MNPLLTDSRRQALR-SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 MN + +ALR A W + ++ S W E D+ A++ VE + + Sbjct: 1 MNGADGMTASEALRDEAVAWLVRVQSDQASADDWTALTVWLEASDDHLAAFEDVERVSAE 60 Query: 60 LGGVPGDVASRALHDTR----LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLR---ADYR 112 L +++ T L RR + + A + + Y+ Sbjct: 61 LTARAAEISPALKPATSRIVPLRRRPALPVWFAAVAAAVVAMVVGPMAWRDYQGAPTVYQ 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T G L DG+ + L+ S VR R V + + AKD RPF + Sbjct: 121 TKPGETREVALADGTRIRLDAASTLTVRLGWRARRVEMADAQATFDVAKDP-ARPFLISV 179 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL-LASAPAQKRIVNAGESLQFSASEFGA 231 Q+ +GTEF +R D ++ V++ VEV A + AG+SL + Sbjct: 180 GDQQVRVVGTEFNIRHYDKTVRVTVRRGIVEVRQPALGSTPVARLVAGQSLSHVEGAPRS 239 Query: 232 VKPLDDE--STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 ++ D + +WT+ + D+ LGE++A L R ++ PA+AG R SG L + Sbjct: 240 IQTATDPNPAFAWTQGRMVCDDETLGEMVAYLNRRYPIPIKVSPALAGKRFSGVLELGDE 299 Query: 290 DAILNVIAQTLPVKIQSITR 309 D ++N +A + R Sbjct: 300 DLVVNRLAGYFSASVHRTDR 319 >UniRef50_B6X9X8 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6X9X8_9ENTR Length = 333 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 65/313 (20%), Positives = 130/313 (41%), Gaps = 8/313 (2%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 +++ A+ W+ + +++S QQ ++ W + + A++ + ++ + VP Sbjct: 16 EQQRIDEEAALWFTRMHSQQLSDQQSQAFKVWLRASKAHADAYEAMASIWQDIEKVPRPA 75 Query: 68 ASRALHDT-RLTR--RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 ++ T RL+ + + + A + + L + + L Sbjct: 76 PTKTTTSTFRLSSFWKPLGHVVAACFIAVVLFLPYSQLPSMLLNNMTLVSTDSTKEVTLS 135 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DGS+L LN + V ++ R + L +G K RPF + Q ++ +GTEF Sbjct: 136 DGSVLFLNRDTRIRVAYETPIRQLYLDHGSAYFKV-KSNPYRPFVINVDQRRIQVVGTEF 194 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA--SEFGAVKPLDDESTSW 242 V ++ ++V Q V + + ++ AG+ S+ S+ + W Sbjct: 195 EVNKKGEQVAVNVSQGIVS-FQSLKDQKPVLLLAGQGALSSSINSKIALNSVTPQDVARW 253 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDP-AVAGLRLSGTFPLKNTDAILNVIAQTLP 301 L+F DKPL EV++ L Y N + P ++A ++SG L+ DA + LP Sbjct: 254 RFGELTFVDKPLSEVLSELKTYSNFQVELSPSSLANQKISGRINLQQPDAFFQALPALLP 313 Query: 302 VKIQSITRYWINI 314 V++ + + I Sbjct: 314 VQVVYQDKNNLLI 326 >UniRef50_Q7VZ09 Putative signal transduction protein n=2 Tax=Bordetella RepID=Q7VZ09_BORPE Length = 320 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 87/313 (27%), Positives = 135/313 (43%), Gaps = 5/313 (1%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 + + A W+ L + + + W +D+ +Q AW +V L + P Sbjct: 6 APDAVAQQAIAWWVRLQSGCAAAAEHEACRAWLARDKAHQRAWDRVATLAAGIRRAPAAP 65 Query: 68 ASRA---LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSE-TGEGLRADYRTAKGTVSRQQL 123 A L +RR ++ L L S + L AD T G + Sbjct: 66 ALAILPDLASRGPSRRQALRLLAGLGVGAAAGAGAYSWAPWQRLVADASTGVGERRQIVP 125 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 G L L + SA +R DA +R + L GE+ + A Q +V T G A Sbjct: 126 GPGVRLVLASDSAVRLRIDATRRAIALLRGEMLVDVHSGAAQPALQVDTGYGMALAEQAR 185 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F V + ++ V +V+V A A AGESL+ + + + ++W Sbjct: 186 FGVCRAGGSARIGVYAGSVQVASAPH-APWHRGEAGESLRLDGAGVPRRGRVAADESAWE 244 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 +L L + A L RYR GV+R DPAVAGLRLSG FPL + + L + Q+LP++ Sbjct: 245 DGLLVVHGWRLDRLAAQLARYRLGVIRVDPAVAGLRLSGVFPLDDAERALAAVRQSLPIE 304 Query: 304 IQSITRYWINISP 316 I+ T YW++++P Sbjct: 305 IRRHTAYWLSVTP 317 >UniRef50_A8ICQ2 Putative iron siderophore sensor protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8ICQ2_AZOC5 Length = 333 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 136/307 (44%), Gaps = 18/307 (5%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 A W L + + A ++ W + A +Q E L +G AL Sbjct: 23 EKALEWLVFLHSGQETDADWAAYEDWRASGVAERKAAEQAERLWAGIG--------PALR 74 Query: 74 DTRLT--RRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTL 131 R RR V+ G + L G G + L AD RTA G L DG+ + L Sbjct: 75 RPRAGLPRRSVLAGAGIALVGGAGLAAFLGMR-RDLFADVRTAVGERRTLTLADGTRIEL 133 Query: 132 NTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDN 191 + ++ D+ + A R + L G I ++ A D RPF V G ALGT F + + + Sbjct: 134 DAATSLDLHYSAKTRRIELLEGRIFVSVAADP-NRPFIVDAGGGAARALGTAFEISRSGD 192 Query: 192 FTQLDVQQHAVEV-LLASAPAQKRIVNAGESLQFSASEFGAVKPLDD--ESTSWTKDILS 248 + V +H V V V+AG ++FS + A D SW +L+ Sbjct: 193 MVNVVVSEHTVRVCYPRETDGPHVDVDAGSEVEFSRAGGLARPHAADVVSRMSWRNGLLA 252 Query: 249 FSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 F D+PL EV+A ++RYR+G ++ D +A L +SG F +T A+L+ ++ LPV I + Sbjct: 253 FQDRPLAEVVAQISRYRHGRIVIVDGELARLPVSGLFESADTAALLDALSAALPVTIDQL 312 Query: 308 TRYWINI 314 W+ + Sbjct: 313 P--WLTL 317 >UniRef50_Q1N723 Regulatory protein PupR, putative n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N723_9SPHN Length = 341 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 18/309 (5%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWA-------WQQVENLRNQLG 61 R A+ A L+ + SP EA W E D + A W E L++ Sbjct: 13 RDAIEAEAARLLARLNSDP-SPDDEAEICAWIEADPRHAVAFARAEAAWDASERLKSAAA 71 Query: 62 GVPGDVASRALHDTRLTRRH----VMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 + + + + R V G+ +LL ++ +G Y T G Sbjct: 72 DITLPPIQQIISEADQRRLSRNIMVAAGVAILLFVVAAIVTVRTFSGVE---RYETGVGQ 128 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 + LEDGS+L LN+ S + RF ++ R VR+ GE + + D RPF V R + Sbjct: 129 MRDIALEDGSILHLNSDSEVEARFTSNGRKVRVMKGEASFEISHDP-ARPFDVEARAAVI 187 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP-LD 236 A+GT F VR + + +L V V V +P Q+ +G +Q + + P + Sbjct: 188 RAVGTAFNVRLRPSLVELTVTHGKVTVHCGDSPLQQVAAGSGAVIQPRSISLTRLGPKIV 247 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 ++ T+W ++ + + + RYR +L D V+ LR+ G F ++ L+ Sbjct: 248 EQRTAWRAQMVELDGETVEQAADEFNRYRKAPILIGDTRVSALRIGGRFRTTDSQEFLSA 307 Query: 296 IAQTLPVKI 304 + +LP+++ Sbjct: 308 LQLSLPIRV 316 >UniRef50_Q88P46 Transmembrane sensor, putative n=12 Tax=Pseudomonas RepID=Q88P46_PSEPK Length = 351 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 74/310 (23%), Positives = 119/310 (38%), Gaps = 10/310 (3%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ--LGGVP 64 D+R +A+ A W L ++ W +N A+ + E L N L V Sbjct: 46 DARARAMDEALDWLVRLQ--CADAADTQAFEAWLSAAPENAEAYVEAEALWNGTPLHKVA 103 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 + + R R K L G + L+AD+ T G R QLE Sbjct: 104 THMHQQQRRSWRGRLRSHWKPLATAALLLVGLFTVGNLP-MRLQADHLTVVGERQRLQLE 162 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DG+ + LNT SA ++ RL GE + Q P V + T+F Sbjct: 163 DGAKVLLNTNSAFASERQDGRQVARLLQGEAYFQV-PEGAQLPLEVEAGPLRAQVRDTDF 221 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWT 243 VR D Q+ VQ+ +V L Q+ ++AG+S+ FG + D + +W Sbjct: 222 AVRYLDGEAQVRVQRG--DVDLQGERDQRIRLSAGDSISVGPQGFGQRQRPDMHKDLAWI 279 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 L F + PL +V+A + RY G + + + + ++G + L L +A Sbjct: 280 DGRLVFENCPLSQVLAEVQRYYPGWIINRNAQLEHVAVTGNYRLDQPLETLRALAHITSA 339 Query: 303 KIQSITRYWI 312 ++ I Sbjct: 340 QLHEYPALVI 349 >UniRef50_C7JBI1 Two component sensor histidine kinase FecR/PupR n=8 Tax=Acetobacter pasteurianus RepID=C7JBI1_ACEP3 Length = 321 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 134/318 (42%), Gaps = 12/318 (3%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG-- 65 R+ ++A+ WY L + + R+++W E D ++ AW + + + +P Sbjct: 3 ERKTPAQAAAGWYLYLREDPDDEGLKNRFKEWLESDPAHKQAWADMNTTASVMAEIPSFL 62 Query: 66 ------DVASRALHDTRLTRRHVMKG-LLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 A R+ R ++ G L L+ A + LRAD+ Sbjct: 63 HTSTSIAPAFVPQKPERVLGRRLLSGCGLALMAACAAMIFVAPDMLVRLRADHYAPVAET 122 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +L DGS + L Q+A + +A +R++ L GE D +R FRV T +T Sbjct: 123 RDVRLADGSEIILAPQAAISITMNASERSIHLLQGEALFNVHHDP-KRLFRVTTENAVIT 181 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 +GT F VR + T + V++ +V V+ +P R + AGE + S + + Sbjct: 182 DIGTIFDVRMEGAATVVAVREGSVRVIARRSPVAGRDLRAGEWERVSGAASASGVVPVAT 241 Query: 239 STSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +W +L ++ G +I L + ++ D ++ R++GT+ L +A L I Sbjct: 242 IGAWRDGLLVARNETFGNMIGALRPWTSTRIILTDRKLSDKRVTGTYNLHQPEAALRQIV 301 Query: 298 QTLPVKIQSITRYWINIS 315 T + S W++I Sbjct: 302 DTYGGHVSSWAS-WVDIV 318 >UniRef50_Q82VA6 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82VA6_NITEU Length = 408 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 83/360 (23%), Positives = 148/360 (41%), Gaps = 71/360 (19%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD-------- 66 +A+ W ++P++EA Q+W D + A QVE++ +++ +P + Sbjct: 43 AAAGWVVRRQDG-LTPEEEAELQEWLAADPAHARALAQVEDVWSRMDELPDEGVVALKAG 101 Query: 67 ---------------------VASRALHDTRLT---------RRHVM-----------KG 85 VA H R + RR + Sbjct: 102 LPSHKAGTALPPSVAIPTPVPVAPEPQHHPRPSSSIQPASPGRRSWLIGLGRFVPQITAA 161 Query: 86 LLLLLGAGGGWQLWQSETGEG-LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAH 144 + GW W + + + + TA+G + L DGS L L+T + A+V Sbjct: 162 AVAFSVVSVGWYGWSTWQHQPTFQQSFATARGEQKKVNLPDGSTLWLDTATRAEVALYRQ 221 Query: 145 QRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEV 204 +R VRL G+ + Q PF VLT ++T +GT F+VR+ + + +V V Sbjct: 222 RREVRLTDGQALFAVQSNPDQ-PFDVLTGGTRITVVGTRFSVRRTRSGLG---AEGSVSV 277 Query: 205 LLASA--------------PAQKRIVNAGESLQFSASE-FGAVKPLDDESTSWTKDILSF 249 ++ + ++AG+S+ A+ G V D + +W + +SF Sbjct: 278 VVEEGRVRVASRSAAHKMDSSSSVELSAGQSIIADAAGALGPVNRDDAPAATWREGRVSF 337 Query: 250 SDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 S PL + +A RY + G++ DPAVA L+++G+F L+ A + + LPV++ + Sbjct: 338 SGTPLMQALAEFERYGDTGLVIRDPAVAALKVNGSFDLRQIGAFARALPRVLPVQLSTRD 397 >UniRef50_Q47F02 FecR protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47F02_DECAR Length = 306 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 16/307 (5%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 L T+ + + A+ W+ L +QQW ++ ++ + ++ L L + Sbjct: 6 LETEVKHRIAEEAAGWFLRLRESGHEEGAHGDFQQWLNANEIHRHEYLTIQRLWGGLDNL 65 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 R + LL+ L G+ S G T +Q L Sbjct: 66 RHRNRRRRTTSV------LTALLLISLATVAGFHAMLSSEGR-----IETKVAETRQQVL 114 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 +DG++ L+ S + + +R V + +G++ A A RPF V + +GT Sbjct: 115 DDGTIAELDADSQLLIDYSPWRRLVVVLHGQVQFKVA--AGLRPFEVRAAGATVRDIGTT 172 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP-LDDESTSW 242 F + + + ++ VQ+ VEV L A + R VNAG+ L + A++ P + D W Sbjct: 173 FNLYVRHDSARISVQEGIVEVTL-DAGGKARRVNAGQQLDYLAADRALPWPKVADAVPPW 231 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 + F PL EVI + R+ + DP + R+SG F + +L + LP Sbjct: 232 REGRWVFEATPLDEVIEEINRHHARPAVLADPRLGSYRVSGVFEQVDRKGLLQALVAVLP 291 Query: 302 VKIQSIT 308 ++++ + Sbjct: 292 LRLEERS 298 >UniRef50_Q4KD29 Sigma factor regulatory protein, FecR/PupR family n=10 Tax=Pseudomonas RepID=Q4KD29_PSEF5 Length = 316 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 130/318 (40%), Gaps = 10/318 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 ++ + +Q L A W +L+ + + +QW Q + A++Q + L + L Sbjct: 6 ISTPQASADQQLLNEARDWLVLLTSGQATAADARALRQWCGQSPQHAAAFEQTKALWHCL 65 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 + + RR + G L A +L GL AD+ T G R Sbjct: 66 QPA-AALLEQQARPRHFGRRAFLGGALAASAALFMVRLTVPGGFAGLTADFATEVGEQRR 124 Query: 121 QQLEDGSLLTLNTQSAADVR-FDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L +G L LNTQ+ R A ++ + L GE+ + + + +P +V +G L+A Sbjct: 125 VDLAEGVSLELNTQTRISRRDLGAGEQGIELLEGEVEVFSQR---LQPLKVQAGEGWLSA 181 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DE 238 F +R D+ + + +++V +A + +++G L + G + +D Sbjct: 182 RQARFNLRNTDHQVCVTCIEGSLQVDVA---GRSIGLDSGRQLTYDPRSIGEPQVVDIHS 238 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +W + +L F + L VI+ + RYR G+ + + + ++ F L + +I Sbjct: 239 VIAWREQVLVFDNASLNTVISEINRYRPGMLVLLNAELGKRKVQARFNLNQLAGVALLIR 298 Query: 298 QTLPVKIQSITRYWINIS 315 K + + +S Sbjct: 299 DAYGAKCTELPGGVVLLS 316 >UniRef50_Q5R0S8 Iron-dicitrate sensor, membrane component n=1 Tax=Idiomarina loihiensis RepID=Q5R0S8_IDILO Length = 319 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 137/323 (42%), Gaps = 11/323 (3%) Query: 1 MNPLLTDSRRQAL-RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M + ++ + ++ A+ W LS ++ R+ +W E D +Q ++ + Sbjct: 1 MQETVNNTSQDSIYTEAAEWMDRLSDGELNTLCRKRFIKWLEADVQHQQVFESMLATWQD 60 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG---EGLRADYRTAKG 116 + R ++ G+ L + G E + TA+ Sbjct: 61 -PALEQSFEQLKKRQKRPVKKAFQWGMGLATACALVVAITVMLPGRFSETPQPTVFTAQS 119 Query: 117 TVS-RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 QL DGS L L S V + QR +R+ G+ + AKD +RPF V Sbjct: 120 PTENTHQLSDGSALQLQLSSEVMVNYSEQQRDLRIESGQAYFSVAKDK-KRPFVVSVGDA 178 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 +TA+GTEF + + + + V + VEV A + ++ AGE ++ S FG VK + Sbjct: 179 SVTAVGTEFNIDRGTDQIDVTVYEGIVEVQ-AEQESFPVLLKAGEKMRLSRGRFGVVKKV 237 Query: 236 D-DESTSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAIL 293 D + W + S++ L +I L R+ + ++ DP + ++G F L +T+ L Sbjct: 238 DVNNLIDWRSGWIEISNENLTYLIERLNRHSSTPIVLADPNLGSREVAGRFRLNDTEQTL 297 Query: 294 NVIAQTLPVKIQSITRYWINISP 316 +++Q + ++ + I ++P Sbjct: 298 KLLSQMYALNVEYL-PQQIRLTP 319 >UniRef50_B4SLV2 Anti-FecI sigma factor, FecR n=3 Tax=Stenotrophomonas RepID=B4SLV2_STRM5 Length = 314 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 84/309 (27%), Positives = 134/309 (43%), Gaps = 6/309 (1%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA 71 AL A+ W+A L + S ++ RW+ W + D + AW++VE++ + A+ A Sbjct: 9 ALEQAAEWFA-LREQGWSDDEQYRWRAWLQADAGHADAWRRVESVWQSFAPLSAPAAATA 67 Query: 72 LHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 L RR ++GL LG G + RTA G L DGS L Sbjct: 68 LDAAGRRRRQALRGLGGALGIGAVSLLGLHGLQTQRGLQTQRTAAGHTGHWILADGSQLW 127 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALGTEFTVRQ 188 LN S + + +R + L GE+ + T P V +L +GT F V + Sbjct: 128 LNADSEVTIDIGSDRRALHLLRGELLLQTGHHPAFADMPLSVHVPGARLQPIGTRFAVGR 187 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 + ++LDV V L V AG ++Q + D W + L Sbjct: 188 EAQGSRLDVFDGVVRCLPLF--GASLDVPAGGAVQIGPMGGLSPVAADPLRGDWQEGRLQ 245 Query: 249 FSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSIT 308 D PL VI L R+ G L CDPA+A L+++ P ++ L+++A+ LP++++ Sbjct: 246 VQDTPLIRVIDELARHHQGYLGCDPALAALKVTAVLPRLDSTQALHLLARALPIRVEQRW 305 Query: 309 RYWINISPL 317 +W + PL Sbjct: 306 PWWTVVRPL 314 >UniRef50_B1KES8 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonadales RepID=B1KES8_SHEWM Length = 354 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 138/343 (40%), Gaps = 39/343 (11%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 Q L AS W A + ++ ++ QW D +N ++ + +++ + Sbjct: 13 DDEQRLDIASDWIAKM-DRELTAEEREALAQWLHCDVENLHVLLEIAQMWDKMDEL--GR 69 Query: 68 ASRALHDTRLTRRHV------MKGLLLLLGAGGGWQLWQSETGEG-------LRADYRTA 114 S + TR+ + +LL + G +Q Q +++ Y+TA Sbjct: 70 LSDIFPKAKPTRKKTPVWMGGIAASILLFLSIGLYQFAQDVEPNAQVTGVIAMQSSYQTA 129 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G + L D S+L LNT S V++ A++R + L GEI I A D RP VL Sbjct: 130 VGESNTINLPDDSILVLNTNSFVQVKYTANERIIELQRGEINIEVAHDK-SRPLSVLAGG 188 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP--------------AQKRIVNAGE 220 + A+GT F V + + +L V V V+ SA V E Sbjct: 189 KVIRAVGTAFNVDVRPSGVELIVTDGKVLVVKKSAEAFLKESHADQPKLMGTALAVAKDE 248 Query: 221 SLQFSASE-----FGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNGVLRC--D 272 + + E V P + + SW L F + L E +A ++RY + D Sbjct: 249 RVMLNNREPLPSVASKVAPGEIATKLSWRTGNLIFRGESLEEAMAEISRYTDIHFELADD 308 Query: 273 PAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 + ++++G F + + +LN++ Q V + ++R I ++ Sbjct: 309 ENLKKIKVAGMFKTGDVNGLLNILDQNFNVSHEKLSRNNIKLN 351 >UniRef50_Q3SU82 FecR protein n=5 Tax=Rhizobiales RepID=Q3SU82_NITWN Length = 320 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 83/321 (25%), Positives = 136/321 (42%), Gaps = 9/321 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ D R + A L + +P + W + +++ W +V + Sbjct: 1 MSQTGPDQYR-LMDEAIDLVIRLQNDPGNPVATEMVKVWRARSPEHERIWARVAKVHGAS 59 Query: 61 GG-VPGDVASRALHDTRLTRRHVMKGLLLLLG-AGGGWQLWQSETGEGLRADYRTAKGTV 118 G + + LTRR+++ G L+ LG AG G+ + G AD+ TAKG + Sbjct: 60 GKILTQRRKTERREKLGLTRRNLVIGGLIGLGTAGAGYSILPEMLLRGW-ADHITAKGEI 118 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 LEDGS++TL SA V F H R V+L G A + QR F V + T Sbjct: 119 RSVTLEDGSVVTLGPDSAIAVDFTTHFRRVQLLAGMSFFDVAAEP-QRAFTVQAAELTAT 177 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLL-ASAPAQKRIVNAGESLQFSASEFGAVK--PL 235 ALGT F V + V VE SA A ++AGE + F ++ + + Sbjct: 178 ALGTAFDVAHDAGMLSISVDHGVVEARASGSAIAAGTKLSAGEWVTFDSATYAIERGSRE 237 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILN 294 + SW +++ + + ++A + R+ G ++ DP + R+SG F L N L Sbjct: 238 AGQIASWRDNLIMAEKEAVSVLVARIGRWIPGRIVMADPFIGSQRVSGIFDLNNPKRALE 297 Query: 295 VIAQTLPVKIQSITRYWINIS 315 + ++ ++ Y IS Sbjct: 298 AVVHPAGAHVRQVSSYLTVIS 318 >UniRef50_B0T5T9 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0T5T9_CAUSK Length = 336 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 113/322 (35%), Gaps = 21/322 (6%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQV-------- 53 +P T +A+ W+ + + +A Q W D + A+ QV Sbjct: 4 SPAPTPPFEDVHEAAAAWWMRQVSDDWTDADQAGLQAWLAADARHADAYGQVLEAMSAFD 63 Query: 54 --------ENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGE 105 LR QL + R +RR M G L G+ + + Sbjct: 64 DQDDAADLRALRQQLQDSAAPLPGARRSSPRPSRRAWMIGAGALAAGLVGFGVLSRPSPA 123 Query: 106 GLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ 165 + Y G + L DGS L++ A VR H R + L G+ A D Sbjct: 124 RI---YIAPAGAPAEFNLADGSRLSIEGGGAVAVRLGRHARDLELTRGQARFEVAHDK-A 179 Query: 166 RPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS 225 RPF V + A GT F + + + + + + V + ++ GE Sbjct: 180 RPFSVTVGDQVVVATGTMFNIDRLSERSVVSLLEGRVIIHPVRGEGPTLVLAPGEQAVLR 239 Query: 226 ASEFGAVKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTF 284 + D + +W L F D PL E + + RY + D A+A LR++G F Sbjct: 240 PGSLPLRQTADVRSAAAWRNGRLIFDDTPLAEAVERVNRYGANLRLGDEALARLRVTGVF 299 Query: 285 PLKNTDAILNVIAQTLPVKIQS 306 + A + I LP+ + Sbjct: 300 KAGDNAAFVEAITAYLPIAARR 321 >UniRef50_B6ITM8 Sigma factor regulatory protein, FecR n=1 Tax=Rhodospirillum centenum SW RepID=B6ITM8_RHOCS Length = 340 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 114/327 (34%), Gaps = 17/327 (5%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 T + ALR A+ W ++ ++W + N A VE G + G Sbjct: 8 TPADETALRDAAAWMVRMAAPGSGAADREALRRWLAEHPRNLAAMDLVERSWRMAGDLEG 67 Query: 66 DVASRA-------------LHDTRLTR--RHVMKGLLLLLGAGGGWQLWQSETGEGLRAD 110 +A R R R G L A GL A Sbjct: 68 TPGVQAERARARRLRLATAADTPRRQRPWRAPAAGAGALALAAALVLALFPPVNYGLDAV 127 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 +RTA G L DGS + LNT + + + R V L GE A R F V Sbjct: 128 HRTAMGQSLETSLPDGSRVRLNTDTELHIDYGWFGRHVALARGEAEFVVAHGDP-RAFTV 186 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF- 229 ++ A GT FTVR T++ + + V +L ++ GE + + Sbjct: 187 SVNGIEVRATGTVFTVRDTGEGTRVFLLEGGVRILNDDDDRTLAVLRPGERAELDRTGVV 246 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 +W L F + PL + +A RY + ++ + L +SG + + Sbjct: 247 ALAPADAAAERAWLAGQLVFRNTPLPDALAEFARYTHADVQVAAPLRDLSVSGVYRATDL 306 Query: 290 DAILNVIAQTLPVKIQSITRYWINISP 316 A L+ +++ PV + + + P Sbjct: 307 QAFLDALSRIHPVGWRQTGPGQVVLEP 333 >UniRef50_B8H128 FecR family protein n=3 Tax=Caulobacter RepID=B8H128_CAUCN Length = 357 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 27/331 (8%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 R+A A+ WY +SG+RVS A + W E + N A+ ++E L + + D Sbjct: 24 RRARDEAAAWYGKMSGQRVSNADLAAFFAWRE-NSLNDAAYTRIEALTTSVRALADDPRL 82 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSET-------------GEGLRADYRTAKG 116 +A+ +T R + L LG G G + G+ + YRT G Sbjct: 83 QAIAETAARRPRGVVARLRSLGQGAGLRTAGVGAALVAAMVIGAVLLGQVGQQTYRTQIG 142 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 L+DGS + LNT S VR QR++ L G+ A DA RPF V Sbjct: 143 ERRAVSLDDGSTIELNTNSQVRVRLSKTQRSLILDRGQAMFIVAHDA-ARPFVVTAGDTS 201 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQ----------KRIVNAGESLQFSA 226 + A+GT F V + ++ + + V+V A I+NAG+ + + Sbjct: 202 VRAIGTRFEVYRAAGAVRVTLAEGRVQVSKAGRRNDGGGQGGERSTPVILNAGQRVDMAP 261 Query: 227 SEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AGLRLSGTF 284 + + +D T WT+ L+F D L E +A + RY + P A R++G F Sbjct: 262 AAPASPVAVDVAAVTGWTRGRLTFKDASLAEAVAEVNRYSRRQVVLGPGTPADQRVNGEF 321 Query: 285 PLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 +T+ +A L +K + I ++ Sbjct: 322 DAGDTETFARGMAVLLDLKTVARPDGGIELA 352 >UniRef50_Q6NA51 Probable FecR, iron siderophore sensor protein n=2 Tax=Rhodopseudomonas palustris RepID=Q6NA51_RHOPA Length = 328 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 125/313 (39%), Gaps = 16/313 (5%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG---VPGDVA--- 68 A W ++ + +QW Q + A+ + L + + +P VA Sbjct: 20 EARRWLLRITSGEATAADADALKQWCAQSPSHARAFAEANLLWDNVEAAAQLPSAVASFQ 79 Query: 69 SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQS----ETGEGLRADYRTAKGTVSRQQLE 124 + +L R +RR V+ + A G + ++ + L ADYRT + Sbjct: 80 AASLGQPRHSRRWVLGAMTATAAAAGAFAVYPPFGLWPSLPELGADYRTRTAERRDIAMP 139 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DG + LNT+S+ ++ D + ++L GE AI+ Q V G + A +F Sbjct: 140 DGVSIELNTRSSLNIVADQSGQQIQLIAGEAAISCPSRPAQ-SLSVSAGGGVVRAADAQF 198 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV-KPLDDESTSWT 243 +R + + ++ V + A Q V G ++ G + +W Sbjct: 199 NIRSDSAGSVVTCRRGVVALDYAE---QSVSVGEGHQASYADGRVGPIVAVEAAAVMAWR 255 Query: 244 KDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + L F PL +V+A + RYRNG ++ + A+ + P+ D+++ ++ Q Sbjct: 256 EGQLVFRQTPLADVVAEVNRYRNGRIVLINEALGRRPVEAKIPIDRVDSLIALVQQAYGA 315 Query: 303 KIQSITRYWINIS 315 K+ + + IS Sbjct: 316 KVTWLPGAIVVIS 328 >UniRef50_B1KDJ5 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonadales RepID=B1KDJ5_SHEWM Length = 359 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 70/339 (20%), Positives = 135/339 (39%), Gaps = 33/339 (9%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD- 66 S+ + A+ W + + +S + +W + + +Q A ++ + + L + Sbjct: 9 SKEELQEQAALWISRIDRG-LSEVEIDSLSKWVSESKAHQDALFEMASYWDDLSVLNELS 67 Query: 67 ---VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRA------DYRTAKGT 117 A + ++ + LLL GG W L + A + G Sbjct: 68 VLFPLETAKNKSKWQYAAIAASFLLLSFVGGNWLLGGQISQHIWGAGEIYTQRLESPVGK 127 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 + L DG+ + LNT S +V + ++ R + L GE AKD +PF V Sbjct: 128 QTSFSLPDGTQVQLNTNSVVEVDYSSNYRQLTLVTGEAKFDVAKD-RSKPFTVTAGVQAF 186 Query: 178 TALGTEFTVRQQDNF-TQLDVQQHAVEVLLASAPAQK---------------RIVNAGES 221 TALGT F V++ D +L V V V ++ +V+ GE Sbjct: 187 TALGTVFNVQKNDEQDMELVVTHGKVLVTSVDKSLEQIKESLSDIAEQSLPGLLVSTGEK 246 Query: 222 LQFSASEFGAVKPLDDES----TSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVA 276 + + + AV+ L E +W + +L F +PL + + ++RY + DP ++ Sbjct: 247 VVIAKNTSLAVEALPLEQMQRDLAWQQGMLIFEGEPLSQALDDVSRYTSVKFEIVDPELS 306 Query: 277 GLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 L+++G F + D +L ++ + + I+++ Sbjct: 307 ELKVAGYFKAGDVDGLLASLSSNFNIVHVKDSDNIIHLT 345 >UniRef50_B1ZTJ9 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTJ9_OPITP Length = 319 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 117/317 (36%), Gaps = 7/317 (2%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 ++ + AS W A L G ++ A W + +++W + L QL Sbjct: 3 RDETHERIEEEASLWAARLDGGGMTDADRATLATWLAANPEHRWLLSRYRQLSAQLESEF 62 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 + A RR G L A T G ++ T L Sbjct: 63 DALVESATQARATARRRWRIGATGLAAAAVVAFTAIVATRGG--EEFSTGAAERHVAALS 120 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DGS + LN + V +R VRL GE A + RPF V T G + GTEF Sbjct: 121 DGSRIALNALTELHVDLGKAERHVRLTRGEAWFDVAPEK-ARPFVVETPAGVVRVTGTEF 179 Query: 185 TVRQQD-NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP---LDDEST 240 +R + ++ V + V V A+A + + + G+ + + + Sbjct: 180 NIRARPKGAVEVTVLEGRVRVQPAAAASSETALEIGQQALVTTAALDVHRVEPGALQNVL 239 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +W + F D PL E + Y + D VA RL G + L + + +L I + L Sbjct: 240 AWREGQAVFEDTPLSEALERFAAYHGRTVEVDGRVADRRLGGRYSLDDFEGLLEEIERVL 299 Query: 301 PVKIQSITRYWINISPL 317 PV++ + + P+ Sbjct: 300 PVRVLRQPDGVVRVVPI 316 >UniRef50_Q213I4 Putative FecR n=2 Tax=Rhodopseudomonas palustris RepID=Q213I4_RHOPB Length = 327 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 131/325 (40%), Gaps = 19/325 (5%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 T L A W L + +QW Q ++ A+++ + G V G Sbjct: 7 TPGPDPLLDEAIAWIVRLKTGEPTRADVQALEQWRGQSAAHEAAFKRAARIHRDAGIVAG 66 Query: 66 DVASR---------ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQS----ETGEGLRADYR 112 + +R A R++RR V+ G L + A G + + + L ADYR Sbjct: 67 RLTARSTAPHIVQAAAGRRRISRRFVLGGGLAVAAAAGYAVVQPPLGLWPSLQELSADYR 126 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 TAKG + Q+ L LNTQ++ +R Q T+ L GE+ + A P VL Sbjct: 127 TAKGEQRKVQVTPEVSLELNTQTSIALRSQQGQPTIELISGEVLVN-ALRPTSGPLVVLA 185 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 GQ+ A +F D + V+V Q + G+ L ++++ G Sbjct: 186 AGGQIGASEAQFNAHCFDAAVSVTCLNGTVDV---QHSGQSVRIGKGQQLSYTSAGVGPS 242 Query: 233 KPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTD 290 +D T+W +L F D+PL V+ + RYR G ++ + ++G F + D Sbjct: 243 MNVDPAQVTAWQSGLLIFRDRPLAAVVEEVNRYRPGKIVIVGAELRWRAVNGDFEINKLD 302 Query: 291 AILNVIAQTLPVKIQSITRYWINIS 315 + + + Q + S+ + +S Sbjct: 303 SFVTQVEQLFGARATSLPGGLVLLS 327 >UniRef50_B3QG97 Anti-FecI sigma factor, FecR n=5 Tax=Bradyrhizobiaceae RepID=B3QG97_RHOPT Length = 329 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 119/317 (37%), Gaps = 18/317 (5%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 D R++AL A+ W+ L+ S + +Q W D + A Q V +L L Sbjct: 7 NDDRQRALHEATEWFVRLNNPLASDETRRAYQIWLVADVAHPEAMQAVSDLWGALDQPAA 66 Query: 66 DVA-------SRALHDTRLTRRHVMKGLLLLLGAGGG------WQLWQSETGEGLRADYR 112 +A + A T RR G L + + + AD Sbjct: 67 QLAASGWHRDTPAPVPTPPHRRPARHGARLAAASAVLALVAAIFVWRDPGIIDRAFADAA 126 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T G +L DGSL L+ +A + +R V L G D+ RPF V Sbjct: 127 TRPGERRDVRLADGSLAMLDGDTALNSDMAGGRRVVTLLRGRAWFDVVADS-ARPFTVHA 185 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 Q + GT F V ++ + V+ V V + + + + F Sbjct: 186 GQVDVQVRGTAFEVDREA--AAVTVEHGRVAVSGPQTADLQVDLTDWQRVAFQNGSLSTP 243 Query: 233 KPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTD 290 ++ + + +W + ++ PL +V+ L + G VL D + LSGTF + + Sbjct: 244 TAIEPDQAFAWRRGLIIVDRAPLSQVVKELDKMAPGHVLIVDRQLERTTLSGTFRADDQE 303 Query: 291 AILNVIAQTLPVKIQSI 307 ++L + TL V+ S+ Sbjct: 304 SVLEALRATLGVRTLSL 320 >UniRef50_A3UKH4 Transcriptional regulator, putative n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UKH4_9RHOB Length = 356 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 82/328 (25%), Positives = 129/328 (39%), Gaps = 37/328 (11%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 +A+ W L P AR+++W D + A++Q E V + L Sbjct: 18 EAAALWSERLREAGADPDLRARFEEWCGDDPAKREAFRQAEAAWRLARSVADEPEMLELR 77 Query: 74 DTRLTRRH--------------VMKGLLLLLGAGGGWQLWQSE---------TGEGLRAD 110 + L+R + +L+ +G G W E +D Sbjct: 78 NKVLSRAASERKPVFSAARLSVLAASVLVCVGFGFVLANWAMPGESVEPSMVIAEQAASD 137 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 + T G L DGS +TL T S A V F +R V L G+ A + R F V Sbjct: 138 FETQIGERLTTPLADGSTMTLGTSSRARVAFSDQERLVELVSGQAYFDVAHE-DGREFVV 196 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS----------APAQKRIVNAGE 220 L ++TA+GT F VR + + + V V A +++ ++ GE Sbjct: 197 LAAGRRVTAVGTAFEVRVDSAQLSVTLVEGNVVVDAPVSVDQGAAGEFARSERAELSPGE 256 Query: 221 SLQFSASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGL 278 L A +V +D TSW +L F D+PL +A + RY R ++ D ++ L Sbjct: 257 QLVQVADAPPSVATVDARRLTSWLDGLLIFEDEPLSAAVAEMNRYARRPIVIADEQLSAL 316 Query: 279 RLSGTFPLKNTDAILNVIAQTLP-VKIQ 305 RLSG F + + +A+ P V+I Sbjct: 317 RLSGAFSAGQSSGFVEALAEYFPEVRID 344 >UniRef50_Q8PKI1 Two-component system sensor protein n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PKI1_XANAC Length = 349 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 73/345 (21%), Positives = 127/345 (36%), Gaps = 41/345 (11%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 RQ +A+ W A E + + W Q ++ A+ ++E + G + Sbjct: 2 DSRQIEHAAAQWLARRESEPWDASDQLQLDAWLAQSTAHRVAFLRLEAAWRETGRLSAIA 61 Query: 68 A----------------------------SRALHDTRLTRRHVMKGLLLLLGAG----GG 95 A +R +R L + L G G Sbjct: 62 AGLPRGGPPARGRFTGRALPAAARGKSAHARPASHAVQHKRRWKLSLAVALAGGITIAGA 121 Query: 96 WQLWQSETGEGLRA-DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGE 154 L + + + +A Y++ G + L DGS TL + + V H+R + L GE Sbjct: 122 LFLDHAPSAQRQQAHAYQSPPGALRSLSLADGSRSTLGSDTRISVELGRHERHIALQRGE 181 Query: 155 IAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL---ASAPA 211 AKD RPF V ++ A+GT+F+VR+ + ++ V + V + P Sbjct: 182 AFFEVAKD-RHRPFVVQVGARRVVAVGTQFSVRRDADELRVVVTEGTVRLDADPKDGKPQ 240 Query: 212 QKRIVNAGESLQFSASEFGAVKPLDDES---TSWTKDILSFSDKPLGEVIATLTRYR-NG 267 +V AG E+ W LSF+D PL + +A R+ Sbjct: 241 PPVLVAAGGIAVAGPHGVLVRSSTIAEAEQQVDWRSGYLSFTDAPLRDAVAEFNRFNTRP 300 Query: 268 VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWI 312 ++ D + LR+ G F +NT+ ++ + P++ +S I Sbjct: 301 LVLADAQLGELRIGGRFSWRNTEGFARLLEHSYPIRAESRAGQMI 345 >UniRef50_B1ZXK1 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXK1_OPITP Length = 342 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 134/345 (38%), Gaps = 38/345 (11%) Query: 1 MNPLLTDSRRQALR------SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVE 54 MNP D + LR +A+ W G ++ + A + W+ D + A+ +VE Sbjct: 1 MNP--GDVSAEILRDEHLTQAAAEWLIR-RGAGLNSAEAAEFAAWH-ADPRHAIAFARVE 56 Query: 55 NLRNQLGGVP-----------GDVASRALHDTRLTRRH----VMKGLLLLLGAGGGWQLW 99 ++ L +P D R + +R H + W W Sbjct: 57 KTQHLLFRLPQAPTAAALMAEADSLMRRARPAKPSRLHGWPTYVTLAAAACVTVALWLAW 116 Query: 100 QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITT 159 + E R + T G L DGS L LN S V F A +R V+L GE Sbjct: 117 PTLRPE--RDIFATLAGQRQSVTLNDGSTLVLNGDSEVQVAFAAAERRVQLHRGEAHFFV 174 Query: 160 AKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA-----SAPAQKR 214 AKD RPF V + + A+GT F VR++ N + V + V+V A A Sbjct: 175 AKDP-ARPFFVSADKVTIRAVGTAFNVRREANAIDVLVTEGKVQVTHGVTGANGAAALPI 233 Query: 215 IVNAGESLQFSASEFGAVKPLDDESTSWT----KDILSFSDKPLGEVIATLTRYRN-GVL 269 + +GES+ D L FSD PLGEV+A RY + Sbjct: 234 YLVSGESVHIDTLSSAIAVASDAAPAGEKLLHSAPRLVFSDTPLGEVVALFNRYNQLQIE 293 Query: 270 RCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 +P +A + G F N ++ + ++ ++ +I+ ++ + + Sbjct: 294 IAEPELALRAVRGNFDADNAESFIALMERSGDAQIERVSPTKVRL 338 >UniRef50_B4WD83 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WD83_9CAUL Length = 332 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 74/312 (23%), Positives = 126/312 (40%), Gaps = 17/312 (5%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQD---QDNQWAWQQVENLRNQLGGVPGDVASR 70 R+A W A + V + +A + W E+D + A ++ L G GD+A Sbjct: 14 RTAEDWLARMRRPTVPARDQAAFLDWLEKDDNLPAYETAKARLAGLAPLAGAFEGDLARL 73 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRAD-----YRTAKGTVSRQQLED 125 T R ++ G L L AD Y +A G ++ LED Sbjct: 74 RGRKPVNTGRRILIGGLATSAVAAIAVLMILPGLGSQSADKGAVVYASAPGEITDLALED 133 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 GS +TL+ + VRF+ R V L G + RPF+V + GT FT Sbjct: 134 GSRVTLDADTQIRVRFEDDARRVALLQGAAYFDVVHNP-ARPFQVAVADRNVIVTGTRFT 192 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQK-----RIVNAGESLQFSAS--EFGAVKPLDDE 238 + N ++ + + V + ++ ++ G+ F+ +P + Sbjct: 193 TTLRRNRAEVSLLEGRVAIGRHDVGKRRSLDHAVMLAPGQKAVFTPGLDRVHLSRPDVES 252 Query: 239 STSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +T+W + L F D PL +VIA RY ++ DPA+A R++ PL +++ + Sbjct: 253 ATAWRERRLIFHDAPLSDVIAEAARYADRPMVIADPALAKTRVTVVLPLTGQVGLIDRMD 312 Query: 298 QTLPVKIQSITR 309 LP+ I+ + Sbjct: 313 DLLPISIERTSD 324 >UniRef50_Q4KAM0 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KAM0_PSEF5 Length = 314 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 110/305 (36%), Gaps = 5/305 (1%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 ++A W + +W D+ + AW++ E + GG+ Sbjct: 3 QAAMDWLLQCHSAPDDALLQQAHARWLAADERHAVAWRKAEKVWLLSGGLAPLEPPVPQP 62 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 R + L L A + + G + L DGS + L + Sbjct: 63 LPTPLRARRNRPRRALKALALAACLLLLAGPTPPTA-HTSPAGEHRQVLLSDGSRIELGS 121 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFT 193 SA V F+ R V L G+ + DA RPF V ++ +GT F V Sbjct: 122 DSAIRVDFEPGTRAVTLLRGQAFFEVSHDA-SRPFTVQAADVKVRVIGTAFDVDLSRTAV 180 Query: 194 QLDVQQHAVEVLLASAPAQKRIVNAGESLQ--FSASEFGAVKPLDDESTSWTKDILSFSD 251 + VQ AV+V + G+SL+ + L + W + L +D Sbjct: 181 VVAVQSGAVQVRDGRGELAVPALGPGDSLRLGLDQGPPQRGRLLPGQVAPWRQWQLLVND 240 Query: 252 KPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 +PL EV+ L Y GVL DPA+ R++ + L++ + L + L ++ Y Sbjct: 241 RPLSEVVEALQDYYPGVLLLTDPALGERRITASLNLRSPVSALQLAIAPLGGHLRQWGPY 300 Query: 311 WINIS 315 I Sbjct: 301 LTLIR 305 >UniRef50_A8EWQ5 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWQ5_ARCB4 Length = 318 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 69/308 (22%), Positives = 137/308 (44%), Gaps = 15/308 (4%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD--- 66 + A HW A E ++ +QE ++ W ++D+++Q A+++ + + +P + Sbjct: 3 DKIKDKAIHWVAC-KKEGLTFEQEKEFEIWLKEDEEHQKAFEEANLVYSIFQNIPKNHTQ 61 Query: 67 -VASRALHDTRLTRR--HVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 ++ AL + + + +K + + G + DY+T ++ ++ L Sbjct: 62 TLSKNALKEAKKIKFIEKTVKPFIGMAAILCGLFIGYKFFIPEYEKDYKTQFSSLKQEIL 121 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS L+++T+S + + +R V L G++ AKD RPF + + + + +GT+ Sbjct: 122 PDGSKLSIDTKSNLQIEYFKDKRKVFLENGQVLFEVAKDK-SRPFIITSGKTSIEVVGTK 180 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASA---PAQK-RIVNAGESLQFSA-SEFGAVKPLDDE 238 F V+ ++ T + V++ V+V + P Q ++ GE + S + + D E Sbjct: 181 FEVKNLEHITTVSVEEGVVKVSFNNHTLLPNQDISLLKKGEKIVISDLGKITYLGKTDIE 240 Query: 239 STS-WTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVI 296 + W D L F L E T +RY++ + + SG F D L I Sbjct: 241 EIAPWRNDELIFRKITLKEAFDTFSRYQDLKVEFQNKNFENKLFSGKFNTLEIDKFLFAI 300 Query: 297 AQTLPVKI 304 + P+KI Sbjct: 301 QKIYPIKI 308 >UniRef50_C5SKV9 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKV9_9CAUL Length = 319 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 11/312 (3%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 ++D + A+ W +S W + + A+ + + L Sbjct: 1 MSDIDAKIEAEAADWVIRAQSGVISELDIIALTDWLDMSPRHARAYAEALTVWGGLDATE 60 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRA-----DYRTAKGTVS 119 R+ + R + ++ +G GG + A Y T KG Sbjct: 61 PVQTLRSSVRPQTPRNPTRRLGVMAMGVGGLTAVAAGVFLMASGALSPVRTYATHKGERQ 120 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L DG+ L LNT + V+ RTV L GE+++T A A Q PFR+LT + LT Sbjct: 121 TITLADGTQLRLNTDTHLSVKMTRSARTVTLDKGEVSVTVAHKADQ-PFRLLTGKLTLTD 179 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS-ASEFGAVKPLDD- 237 +GTEF V + + ++ V++ +E +A A R++ G+ + AS + +D Sbjct: 180 IGTEFNVARFNGEVRVAVREGQIE--MADHSAASRLL-PGDLGTYREASGTRQLAKVDPA 236 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 E+ +W + + PL +V A L RY + + A LRL+ L + A+ I Sbjct: 237 EAFAWQSSRAIYRNLPLSDVAADLNRYFEKPIIVEGDAAQLRLNAILTLDSQTAVAGRIT 296 Query: 298 QTLPVKIQSITR 309 + LPV ++ Sbjct: 297 EFLPVDARTTPD 308 >UniRef50_C5SQB3 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQB3_9CAUL Length = 314 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 121/302 (40%), Gaps = 14/302 (4%) Query: 14 RSASHWYAVLSGE-RVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV---PGDVAS 69 ++A W+ L+ SP+ +A ++ W +D N+ A++ + QLG + P +A Sbjct: 5 QTADEWFVRLNSGLPASPEDDAAFRLWLSEDPLNEKAYRDCQMRWMQLGAIGQSPEILAR 64 Query: 70 RA----LHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 RA +RR ++ + A G ++ A Y T G L Sbjct: 65 RASALKAAAGTHSRRDWLRWAGGGVAAAVTGGVVYAGFAPSRAWAKYATGVGQRLTVPLS 124 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DGS LTL S RF +RT+ L G+I + A+ P V ++ G + Sbjct: 125 DGSELTLAPLSRVRARFADGKRTIELQDGQIFVRAARKTT--PLTVKAGACTISGSGCQL 182 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 V ++ V +V + + R + +G+ L + +T W Sbjct: 183 QVTHDAGKAEVLVADGGAKVT--AQGGRTRQLWSGQKLDGDMATARVQAVDVRVATEWRM 240 Query: 245 DILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L FSD+PL EV+A RY DP++ LRLSG+F + + L + Sbjct: 241 GRLVFSDQPLSEVVADFNRYSVEQFTIADPSLGTLRLSGSFRYDGVEDFPQALESVLGLS 300 Query: 304 IQ 305 ++ Sbjct: 301 VE 302 >UniRef50_Q14F31 FecR (Fragment) n=6 Tax=Enterobacteriaceae RepID=Q14F31_ECOLX Length = 158 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 158/158 (100%), Positives = 158/158 (100%) Query: 25 GERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMK 84 GERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMK Sbjct: 1 GERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMK 60 Query: 85 GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAH 144 GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAH Sbjct: 61 GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAH 120 Query: 145 QRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 QRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT Sbjct: 121 QRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 158 >UniRef50_D0XTD7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XTD7_9CAUL Length = 324 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 68/304 (22%), Positives = 113/304 (37%), Gaps = 15/304 (4%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 Q L+ A+ W L V + W + Q A+ ++ + ++ + Sbjct: 6 QHLQEAADWLTRLQRPEVDETDWLAFDAWLSE-PGAQEAYDAIQAVDEEIFQRGSAIRGE 64 Query: 71 ALHDTR-LTRRHVMKGLLLLLGAGGGWQLW--------QSETGEGLRADYRTAKGTVSRQ 121 R +R L G G E Y TAKG Sbjct: 65 LAEPRRVAAKRAFSIDWRWLGGLGAAAAAAAVAITVAPWGELLPQPDTLYATAKGESRAL 124 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 QL DG+ + LNT S VR + R V + G+ A D+ RPF + + +G Sbjct: 125 QLADGTHIDLNTDSHLSVRLEKDARRVTVHEGQALFDVAHDS-ARPFLITAGDETVRVVG 183 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF--SASEFGAVKPLDDES 239 T F VR++D + V + VEV + G+ L+ AS ++ Sbjct: 184 TRFDVRRRDGQLSVTVLRGLVEVS-TDGNDTPIQLRPGQMLEHVEGASGVSVRSVAAEDQ 242 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVIAQ 298 W L + D+PLG +++ + Y + +R + A LR SG + DA++ + Sbjct: 243 VGWRSGRLIYRDQPLGRIVSDMNHYFDRPIRLEGENTATLRFSGVLIVDGQDAMVRRLTS 302 Query: 299 TLPV 302 +P+ Sbjct: 303 LMPI 306 >UniRef50_Q47X54 Putative regulatory protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47X54_COLP3 Length = 396 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 75/371 (20%), Positives = 132/371 (35%), Gaps = 60/371 (16%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 PL + Q A+ W + + S + W ++ +QQ++ L Sbjct: 24 EPLSDKTHVQISDEATQWLLTIEEDD-SENNQQALNAWLSLSAQHKKVYQQLQTLWEVAD 82 Query: 62 GVPGDVASRALHDTRLTR------------------------------RHVMKGLLLLLG 91 +P D+ S L +T R M Sbjct: 83 ELPVDLFSEDLLGLSMTPSSAVNTSSRVNPYALKKESILAKFISFFTLRKTMYTASFASV 142 Query: 92 AGGGWQLWQSETGEGLRAD---------------YRTAKGTVSRQQLEDGSLLTLNTQSA 136 + + E + D Y+T G +DGS++ L +S Sbjct: 143 IFATFITFTQYNREMVTTDKPLQVASSSTLRTNEYQTKLGEHKTITAQDGSIIVLAAKSQ 202 Query: 137 ADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLD 196 + + A++R + L YGE T KD +RPF V + ALGT F VR+ + Q+ Sbjct: 203 VFIDYSANRRDIHLLYGEALFTVEKDK-ERPFIVHNHGRSVQALGTIFNVRESKSAMQVS 261 Query: 197 VQQHAVEVLL----------ASAPAQKRIVNAGESLQFSA-SEFGAVKPLD-DESTSWTK 244 V + VEV + +S Q + AG++L+ + +F ++ +E +W Sbjct: 262 VLEGIVEVNVEPEVKSKVTNSSDKNQVATLVAGQALELDSLGQFSTTYAIEVNERMAWQD 321 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L++ + L VI L RY + + VA + +G+ D L + PV+ Sbjct: 322 GRLNYVNTDLANVIFDLKRYSTLSIHIPNKQVANMGYTGSVIYDKVDDWLIALPYIFPVE 381 Query: 304 IQSITRYWINI 314 +Q + + Sbjct: 382 VQRHGNSVVIV 392 >UniRef50_B0U8Q5 Anti-FecI sigma factor, FecR n=1 Tax=Methylobacterium sp. 4-46 RepID=B0U8Q5_METS4 Length = 327 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 13/319 (4%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG---- 61 + Q + +A W LS V+ +Q ++ W D ++ AW ++ G Sbjct: 5 AERDEQPVEAAIGWMVELSSGAVTERQRRAFEAWLAADPGHEAAWLGLQESLMPCGVAAR 64 Query: 62 -GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLW--QSETGEGLRADYRTAKGTV 118 +P ++ L + RR V+ G+ LG G L + +GL AD+ T Sbjct: 65 QRLPPGRLTQRLLARQPNRRAVLTGVAAALGLGAAGSLVADRFVPLDGLLADHVTRTAEQ 124 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +R +L+DGS + L ++A DV + +R +RL GE+ + A A PFR+ LT Sbjct: 125 NRLRLDDGSEVVLAPRTAIDVDYALGRRAIRLIEGEVLVRVA--ARSAPFRLDAGVLNLT 182 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-D 237 A F V ++ Q +++ +A + GE L + + Sbjct: 183 AESGSFLVEKRAEVLAATGLQGTGRLVVGAA---AAAIGRGERLGLEDGRLRRQAVDEVE 239 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + T+W +L ++ + ++ L Y GV+R DPAVA +R +G FPL++ L+++ Sbjct: 240 DVTAWLDGVLVAKNRSVASIVRALRPYFPGVIRVDPAVAEIRATGVFPLRHPGEALDILG 299 Query: 298 QTLPVKIQSITRYWINISP 316 +L + I + YW+ I P Sbjct: 300 ASLGLSITRVAHYWVAIGP 318 >UniRef50_D0XPS8 Anti-FecI sigma factor, FecR n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XPS8_9CAUL Length = 318 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 73/308 (23%), Positives = 114/308 (37%), Gaps = 21/308 (6%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV---------- 63 A W+ L E Q +Q W E D D+ A+ VE + L Sbjct: 8 DQAIRWFVALRDESADEGQWLAFQGWLEADADHPRAYDAVERMWLDLDEAEAAPDVVAPS 67 Query: 64 PGDVASRALHDTRLTRRHVMKGLLL--LLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 P +R +TRR V + L+ A G W + D Sbjct: 68 PSPRRARPSGRPSVTRRLVPAFAIAASLVLAAGLWLNLSGRPQTFVTTD------ATRVV 121 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 L+DGS + LN S VR QR V L GE A RPF V + + + LG Sbjct: 122 VLDDGSSVHLNRHSRMSVRMTDDQRMVTLDEGEAAFDVVHRP-DRPFVVRSGEQSVRVLG 180 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESL-QFSASEFGAVKPLDDEST 240 T F V ++ VQ+ AV V + R + AG+S+ + + D +T Sbjct: 181 TAFDVLSHKGRYRVAVQRGAVAVDAGAGHDDTR-LRAGQSIERVGLAPPVLSTISPDAAT 239 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 SWT+ L + + L V L+RY + + + +G + + + + L Sbjct: 240 SWTQGTLIYRNASLSTVADDLSRYLDKPVIVGDPAKRVMFTGVLQVGDEATMARQLEDLL 299 Query: 301 PVKIQSIT 308 P+++ + Sbjct: 300 PIRVSRSS 307 >UniRef50_A6T0M6 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0M6_JANMA Length = 326 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 19/326 (5%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 +T R A W L+ V+ ++QW Q++ + A+ Q ++ + Sbjct: 1 MTADDTAIQREAQAWVVRLASHAVTENDANAFRQWCAQNRAHATAFSQARSVWGAMRPAA 60 Query: 65 GDVASR------ALHDTRLTRRHVMKGLLLLLGAGGGWQ----LWQS--ETGEGLRADYR 112 + A R RR + G + A ++ LW S E G ADY+ Sbjct: 61 MQLKQHEAIRQDAASGVRKGRRAFLGGAVAASVAYLAFRPPMELWPSLGEVAAGFAADYQ 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDA-HQRTVRLWYGEIAITTAKDALQRPFRVL 171 TA G + DG L+ +NTQ+ +V+ DA ++ + L GE I T + R V+ Sbjct: 121 TATGEQRSLAMHDGLLVQMNTQTRINVQADANNETDLELLSGEAEIQTDFNKENRV-TVV 179 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 G ++AL F +R N + Q V+V A + ++AG+ L + A +FG Sbjct: 180 AGGGVVSALRARFNIRYTGNNVCVTCLQGRVQVGQAIH---RATLDAGQQLTYRADDFGV 236 Query: 232 VKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNT 289 + ++ T+W K +L F+ L EV+A + RYR G L + ++ +F + Sbjct: 237 PQAVNTSNVTAWRKRMLVFNQVALSEVVAEVNRYRPGKLILRSEELGRSKVQASFSIDRL 296 Query: 290 DAILNVIAQTLPVKIQSITRYWINIS 315 D ++ +I + + + + Sbjct: 297 DDVIALIRDAYGADVTQLPGGIVLLR 322 >UniRef50_Q79AD3 HasS protein n=1 Tax=Serratia marcescens RepID=Q79AD3_SERMA Length = 317 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 11/292 (3%) Query: 21 AVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR------ALHD 74 L+ + + W D + A +Q L LG +P + AL Sbjct: 17 VSLAEGALPADRRRALDAWLAADPQHPAALRQARLLWTTLGQLPPEQRQALQPQVAALKT 76 Query: 75 TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQ 134 R + A + L+ADY+T +G V L DGS + L++ Sbjct: 77 PSRHRWPRWAVAAAVALAVSFGVYRGPDLWIRLQADYQTVRGEVREVALPDGSRVALDSG 136 Query: 135 SAADVRFDAHQRTVRLWYGEIAITTAK--DALQRPFRVLTRQGQLTALGTEFTVRQQDNF 192 SA + + A +R VRL G A A RPFRV + G ALGTEF+V + + Sbjct: 137 SAIALAYSADERKVRLLSGAAYFIVAPLGGAESRPFRVEAKNGVTQALGTEFSVARTEQG 196 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDK 252 + V QH+V V L + +V ++ + + + + +W + L + Sbjct: 197 VDVSVHQHSVRVTLERGE-RSLVVAQRQAAHYRNGQLQLTRQTAGDD-AWRRGWLVIDRQ 254 Query: 253 PLGEVIATLTRYRNGVLR-CDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 PL + +A L RYR + +PA+ +SG F L D + I Q L + Sbjct: 255 PLTQALAQLNRYRGTRIVAVNPALRTRTVSGVFALNKLDDGVGAIRQELSAR 306 >UniRef50_A6SZB6 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZB6_JANMA Length = 344 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 128/325 (39%), Gaps = 22/325 (6%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 + Q R A W L+ + +++W E+ + + + + L L V Sbjct: 25 EQDQIQREAQAWLRRLASGEATQLDIQGFRRWREKSPLHWTTFTEAKRLWQMLDPALAQV 84 Query: 68 ASR----ALHDTRL-----TRRHVMKGLLLLLGAGGGWQLWQS----ETGEGLRADYRTA 114 A R A + TRL RR + A G ++ +ADYRT Sbjct: 85 AQREAVCAANGTRLVGNKHGRRAFLGFATGAAAAAGAAIVYPPLGLWPAINEWQADYRTT 144 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQ--RTVRLWYGEIAITTAKDALQRPFRVLT 172 G L + L LNTQ++ + + + ++L GE AI + A F V Sbjct: 145 TGEQRMLALANDVKLELNTQTSVNRQSAQGEVPAGIKLVSGETAIDLSASAPA--FSVNA 202 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 G+ A + F VR DN + + V V P KR V A + + + A Sbjct: 203 GAGRSIAQASRFEVRNLDNKVCVTCIEGEVLVE---HPLGKRRVYARQQVVYDADTLSPP 259 Query: 233 KPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTD 290 + + ++W K L F PL +V+A + RYR G V+ + +SG F + + D Sbjct: 260 ATVALADWSAWRKGTLVFWQTPLDKVVAEINRYRPGKVVLLASHLNNRAVSGRFAIASLD 319 Query: 291 AILNVIAQTLPVKIQSITRYWINIS 315 +L I Q+ +K ++ + +S Sbjct: 320 TVLLQIQQSYDLKAHTLPNGILVLS 344 >UniRef50_B4SP26 Anti-FecI sigma factor, FecR n=3 Tax=Stenotrophomonas RepID=B4SP26_STRM5 Length = 322 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 72/310 (23%), Positives = 118/310 (38%), Gaps = 22/310 (7%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ L AS W A L + + ++ W +D + AW Q E L Q Sbjct: 1 MSRLRHKEDASLYERASDWVARLEAPDCTAAERESFEDWLAEDPAHVKAWVQAETLFQQG 60 Query: 61 GGVPGDVASRALHDTR--------LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYR 112 + D R L G+ L +G G L + T + D R Sbjct: 61 ETLGSDPWLRTAAARVARPARRRLLPGLAAAAGICLAIGIGWMIALDGNPTPQLYANDTR 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 + L DGSL TL+ + RF R + L G + + A + ++ Sbjct: 121 LP----RQLTLADGSLATLDAGTTLRARFGWRHRDLELERGRLQLQVA--PSSKALQLRA 174 Query: 173 RQGQLTALGTEFTV-RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 + +GT F V R +D ++ + + AVEV +A + ++ G+ LQ S Sbjct: 175 GDSTIRDIGTTFQVERLRDGLVEVALLEGAVEVSNGTA---QHMLAPGQQLQVLPSGRIQ 231 Query: 232 VKPLDDESTS---WTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLK 287 P + + W + L F PL V+ + RY R ++ DP + L +SGTF Sbjct: 232 PGPALSSTVAAEGWLRGKLVFDATPLSIVVERMNRYGRTPLVIVDPEITDLAVSGTFRAG 291 Query: 288 NTDAILNVIA 297 + +L+ + Sbjct: 292 DAQELLSALE 301 >UniRef50_Q1H1L7 Putative FecR n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H1L7_METFK Length = 348 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 68/331 (20%), Positives = 137/331 (41%), Gaps = 32/331 (9%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG--- 61 + ++R A ++A W+ ++ + +R+++W +Q A+Q+V L L Sbjct: 3 HSPAQRSARQAAIKWFVIMQDADTEHPERSRFEEWLLSHPAHQRAYQEVCALWEDLDSSD 62 Query: 62 -------GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGG------GWQLWQSETGEGLR 108 + + ++ R + + L ++ A G++ WQ+E + Sbjct: 63 RLLHLESAMQQKIFIEKTDRSKKIRTVITRTLSVMFFAALGITSYYGYESWQNEPTMHMA 122 Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 A T G + Q LEDG+ L +N S +V + +R V L GE + AK+ RPF Sbjct: 123 A--STEIGQIRSQVLEDGTKLMVNANSDIEVTYTRKERRVILKRGEASFDIAKNP-DRPF 179 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL-------ASAPAQ----KRIVN 217 V + ++T LGT F V + + ++ V V + +AP + + Sbjct: 180 VVDSGLARITVLGTRFAVNRFSSKVRISVDHGVVRIEPQQYLTTEKTAPNRYAEHVLTLR 239 Query: 218 AGESLQFS-ASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAV 275 E + + E ++ +++ S+ ++F L E+ TL+RYR + + A Sbjct: 240 DNEVAEINLNGEAKRLQRSAEDAFSFEYGTITFDQAGLEEIAETLSRYRTLPVSAEFAAQ 299 Query: 276 AGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 + ++ K + + + PVK+ + Sbjct: 300 QDVSITAVIQSKYVERFIKELPVIAPVKVTT 330 >UniRef50_A8EUR0 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUR0_ARCB4 Length = 319 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 62/313 (19%), Positives = 140/313 (44%), Gaps = 14/313 (4%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV-- 67 ++ ++ + ++ + + +QE + W +++ +++ A++ V+ ++ + D Sbjct: 2 KENIKEKAAYFFTCKKDGFTKEQEIEFNSWIDENIEHKKAYENVQRVQQMFLSLSKDTKE 61 Query: 68 -ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG-----EGLRADYRTAKGTVSRQ 121 S+ +H R K L + A + + S G G++ + T K + Sbjct: 62 KISQEVHQGIKRERIFRKTQFLKIAASILFVIVVSFFGIEYLNFGIKHSFTTNK-EIKNI 120 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 L DGS + L+ ++ D+++ ++R V + G++ AK+ +PF V ++ LG Sbjct: 121 VLPDGSRVILDAKTKVDIKYFENKREVNIISGKVLFDVAKNP-NKPFIVNANMIKVEVLG 179 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPA--QKRIVNAGESLQFSA-SEFGAVKPLDDE 238 T F V+ +++ +DV V+V + I+ +G+ + F + +K +D + Sbjct: 180 TNFEVKNEEDKISIDVISGKVKVEENKDNKFEELAILTSGKCISFDKENNKIILKDIDIK 239 Query: 239 STS-WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + + W IL F D L + I +Y++ + D + +SG+F + D L ++ Sbjct: 240 NIASWKDGILFFQDYSLEKSINEFRKYKDINIFIDNNIKKYMISGSFKIDEFDKFLFALS 299 Query: 298 QTLPVKIQSITRY 310 + +KI Y Sbjct: 300 KIYSLKIDRKDNY 312 >UniRef50_Q1NEQ4 Two-component system sensor protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ4_9SPHN Length = 329 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 83/330 (25%), Positives = 123/330 (37%), Gaps = 19/330 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRN-- 58 M + R +A W A E SP E + W + D ++ A+ Q E Sbjct: 1 MADQVRAIPRAIQDAAGDWLAR-RQEPASPDVEQAFAVWLDADPRHRIAYAQAERHWQDS 59 Query: 59 QLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGG----------WQLWQSETGEGLR 108 L +R L RH LG ++ Sbjct: 60 LLLADSDIGRTRKLVRAPFLMRHSNHVAAASLGVVVLLGIGGVGLLRYESPLELVSPAQA 119 Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 A Y TA G + L DGS LTL+T + V A +R V L G A D +RPF Sbjct: 120 ATYETALGEIRTISLADGSQLTLDTATRVRVTLSASERKVSLERGRARFRVAPDG-KRPF 178 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS--APAQKRIVNAGESLQFSA 226 V G + A T F V + + V + V++ S A R + AG++ Sbjct: 179 TVTVPGGTVVARSTLFDVSVERESPVVAVIEGRVDLTSTSDAASHPARTLAAGQTADLGN 238 Query: 227 SEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLR-CDPAVAGLRLSGTFP 285 ++ +P T W +L+ PLGE +A + RY +R DP +A L ++G F Sbjct: 239 ADM--PRPTLPAETQWVSGMLALDGGPLGEAVAAINRYNRIQIRLADPDLARLSVTGAFQ 296 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINIS 315 ++N DA +A T + I I + Sbjct: 297 VRNPDAFARAVAATFGLGIDRTDPGVILLR 326 >UniRef50_B4EXQ7 FecR-like transcriptional regulator n=4 Tax=Proteus RepID=B4EXQ7_PROMH Length = 337 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 123/311 (39%), Gaps = 7/311 (2%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 S++ A+ W+ +++S QQ ++QW D+DNQ A+Q + + + +P Sbjct: 27 SQQSIDEQAALWFTRQHSQQMSSQQRQAFKQWV-ADKDNQQAYQAIAEIWHSCEALPRPT 85 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 R + L + + + L DGS Sbjct: 86 IVPIEKRKSSLWRPFIHTTAALCLVAVLYLPYSHLPALLMDNMTLATSNFPKEMTLADGS 145 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV- 186 + LN + V + QR + L GE + RPF V + + +GTEF V Sbjct: 146 KVFLNRNTQVRVSYVQTQRRLWLDKGEAYFKVKPNPY-RPFYVHADERLIKVVGTEFEVS 204 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESL--QFSASEFGAVKPLDDESTSWTK 244 R Q+N + V + VEV A+ + + AG Q + ++F D SW Sbjct: 205 RYQNNQISVAVHEGIVEVK-ATEKSPATYLYAGSQAISQSTDNQFVISSVNADSVGSWRF 263 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L F ++PLG+VI L Y + + A VA +++SG + + + + + LPV Sbjct: 264 GQLHFFEQPLGDVITKLKPYLDINVHISSADVAKIKVSGVANINDAKSFITALPLLLPVN 323 Query: 304 IQSITRYWINI 314 + + + I Sbjct: 324 VIFTDKNNVLI 334 >UniRef50_Q15XS4 Putative FecR n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XS4_PSEA6 Length = 383 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 111/315 (35%), Gaps = 27/315 (8%) Query: 18 HWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP---------GDVA 68 W L S + + W DN+ A+ + + +G D Sbjct: 60 EWLTYLYCGHTSADKREEFVLWLNSSDDNKQAFNHSQKIWQTIGMTDSAAEWIQQHADQQ 119 Query: 69 SRALHDTRLTRRHV--------MKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 + +H + R M + LL G + + + + G + Sbjct: 120 TTTVHQVKPKRIFAKSFLALCAMAASVALLAFNGVFNTTAHLEIPQPQTAFTSPVGQNRQ 179 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS +TL S+ V F +R + L G D R F V +Q Q+ Sbjct: 180 ITLSDGSDVTLAGNSSILVAFSEDERRITLRKGSAYFDVTHDP-SRVFSVTAQQTQVRVR 238 Query: 181 GTEFTVRQQDNFT-QLDVQQHAVEVL----LASAPAQKRIVNAGESLQFSASE--FGAVK 233 GT F V+ N + ++ VQ+ V+V A Q + E L + Sbjct: 239 GTAFEVKYSPNNSLKISVQRGLVDVADLPETAGQREQVLQLRPNEQLHTDIQGRFLSPIT 298 Query: 234 PLDDE-STSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDA 291 E +W + L + + PL VI + RY + V+ D ++ L ++ +F + + Sbjct: 299 VFQPETEFAWLEQRLIYDNVPLKNVIMDINRYVKKPVIILDNSINELPITASFTFEQIEP 358 Query: 292 ILNVIAQTLPVKIQS 306 +L +A P+ + Sbjct: 359 MLEGLASAYPITLTH 373 >UniRef50_A9C118 Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C118_DELAS Length = 375 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 80/333 (24%), Positives = 133/333 (39%), Gaps = 47/333 (14%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHD 74 +A+ W+ + + ++ +W ++ A + + +P + +R + Sbjct: 33 AAADWHTRMEQGLTAEEEAEF-TEWLAASTAHEAALRHLGQSLAAARSIPPEQVARLRAE 91 Query: 75 TRLTR-------------------------------RHVMKGL----LLLLGAGGGWQLW 99 R R + L L L G GW W Sbjct: 92 QARRRSQSAPHARPEPAPQRPSSEERQGWSWSRLLQRPALAALCCTVALALAVGVGWHQW 151 Query: 100 QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITT 159 Q + + + T +G L DG+ L+L+ + A V +R VR+ G+I Sbjct: 152 QQQPT--FTSSHLTPRGQARTITLPDGTALSLDADTQAQVTLYRDRREVRITQGQILFAV 209 Query: 160 AKDALQRPFRVLTRQGQLTALGTEFTVRQQ-----DNFTQLDVQQHAVEVLLASAPAQKR 214 A D+ RPF VL ++T GT F+VR + Q+ VQ+ V V A A Sbjct: 210 APDS-DRPFHVLAGPARVTVGGTRFSVRYRATGMEAGSAQVAVQEGHVRVAGAQGAATPA 268 Query: 215 IVNAGESLQFSASE-FGAVKPLDDESTS-WTKDILSFSDKPLGEVIATLTRYRN-GVLRC 271 + AG++L S + G V + S + W K ++ F + PL + +A L RY G++ Sbjct: 269 DLVAGQALSVSPAGVLGPVAAVAPGSIALWRKGLIRFENTPLADALAELERYGPTGLVVH 328 Query: 272 DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 DPAVA LR+ GT+ ++ Q LPV + Sbjct: 329 DPAVAALRIGGTYQTSRPAEFARMLVQILPVTL 361 >UniRef50_D0J1W8 Putative FecR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J1W8_COMTE Length = 386 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 78/342 (22%), Positives = 136/342 (39%), Gaps = 54/342 (15%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH- 73 +A W++ + +S + +QW +D + A++++ L P D+ ++A Sbjct: 37 AAVEWHSR-WEQGLSESEHEALRQWLAEDAAHDTAFRRLTQDMAVLRSAPADMVAKARSS 95 Query: 74 ------------------DTRLTRRHVMKGLLLLL------------------GAGGGWQ 97 + V +LL AG GW Sbjct: 96 FKSEAIASGGSSAQPGGEPAKPKAMEVWARAGVLLNWMQPRSALVAACCAAVFAAGIGWH 155 Query: 98 LWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAI 157 W + + Y KG L DG+ L ++T + A V +R VR+ G+I Sbjct: 156 QWMLQPT--FESSYVAQKGQQKLVTLPDGTELAMDTDTQAQVTMYRDRREVRIADGQIMF 213 Query: 158 TTAKDALQRPFRVLTRQGQLTALGTEFTVR-----QQDNFTQLDVQQHAVEVLLA----- 207 + A D ++PF VL ++T LGT F+VR + V++ V V A Sbjct: 214 SVAADP-KKPFHVLAGPARVTVLGTRFSVRYRSQGADAGAVNVSVEKGHVRVTSAYSTAN 272 Query: 208 SAPAQKRIVNAGESLQFSASE-FGAVKPLDDESTS-WTKDILSFSDKPLGEVIATLTRYR 265 + + AG+ L+ S++ G V + S + W K ++ F + L + + L RY Sbjct: 273 AKADLPVELLAGQGLRVSSNGVLGQVASVSPGSVALWRKGLVRFDNTSLADALLELERYG 332 Query: 266 N-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 G+ DPAVA + + G++ + ++ Q LPVK+ S Sbjct: 333 PTGLEIRDPAVAAMTIGGSYQIDRPGEFARMLTQILPVKLVS 374 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P23485 Protein fecR n=30 Tax=Enterobacteriaceae RepID=F... 347 2e-94 UniRef50_A6T3T9 Fe2+-dicitrate sensor, membrane component n=1 Ta... 324 3e-87 UniRef50_Q7N8I4 Similarities with probable transmembrane sensor ... 321 2e-86 UniRef50_A6T180 Fe2+-dicitrate sensor, membrane component n=3 Ta... 315 9e-85 UniRef50_Q82VT5 Putative transmembrane sensor n=1 Tax=Nitrosomon... 315 2e-84 UniRef50_Q1GXU4 Putative FecR n=1 Tax=Methylobacillus flagellatu... 314 3e-84 UniRef50_B3PJT3 Transmembrane sensor n=1 Tax=Cellvibrio japonicu... 313 5e-84 UniRef50_C6XE50 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 313 5e-84 UniRef50_C3K1F9 Putative iron transport-related protein n=1 Tax=... 312 9e-84 UniRef50_Q4KED4 Sigma factor regulatory protein FecR n=2 Tax=Pse... 310 5e-83 UniRef50_A6SVZ8 Fe2+-dicitrate sensor, membrane component n=1 Ta... 304 3e-81 UniRef50_A9C159 Anti-FecI sigma factor, FecR n=2 Tax=cellular or... 303 5e-81 UniRef50_A6T3T5 Fe2+-dicitrate sensor, membrane component n=2 Ta... 303 7e-81 UniRef50_C3K7W7 Putative iron uptake regulator protein n=2 Tax=P... 301 2e-80 UniRef50_B0KIL8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas... 301 3e-80 UniRef50_C6XBX0 Anti-FecI sigma factor, FecR n=4 Tax=Proteobacte... 300 4e-80 UniRef50_A6V0K5 Probable transmembrane sensor n=6 Tax=Pseudomona... 300 5e-80 UniRef50_B4X4W9 Sigma factor regulatory protein, FecR/PupR famil... 300 5e-80 UniRef50_A9C156 Anti-FecI sigma factor, FecR n=3 Tax=Comamonadac... 299 7e-80 UniRef50_A6SXC7 Fe2+-dicitrate sensor, membrane component n=1 Ta... 299 8e-80 UniRef50_C6XBX8 Anti-FecI sigma factor, FecR n=2 Tax=Betaproteob... 299 1e-79 UniRef50_A6T0J4 Fe2+-dicitrate sensor, membrane component n=1 Ta... 298 1e-79 UniRef50_Q82SB2 Putative transmembrane sensor n=1 Tax=Nitrosomon... 298 2e-79 UniRef50_D0S2I9 Transmembrane sensor n=1 Tax=Acinetobacter calco... 298 2e-79 UniRef50_B0KJM3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 296 4e-79 UniRef50_A9BW97 Anti-FecI sigma factor, FecR n=1 Tax=Delftia aci... 296 9e-79 UniRef50_B0KMC8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas... 295 1e-78 UniRef50_A6SX53 Fe2+-dicitrate sensor, membrane component n=1 Ta... 295 2e-78 UniRef50_B0KG70 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonad... 293 4e-78 UniRef50_B8ECR9 Anti-FecI sigma factor, FecR n=3 Tax=Shewanella ... 293 5e-78 UniRef50_C6DJA8 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacter... 292 9e-78 UniRef50_B4WXE6 Sigma factor regulatory protein, FecR/PupR famil... 291 1e-77 UniRef50_B7VAW3 Probable transmembrane sensor n=7 Tax=Pseudomona... 291 3e-77 UniRef50_A6SZL9 Fe2+-dicitrate sensor, membrane component n=1 Ta... 290 5e-77 UniRef50_Q02NL2 Possible Fe2+-dicitrate sensor n=1 Tax=Pseudomon... 289 1e-76 UniRef50_C1DJ04 Anti-sigma factor, FecR family n=1 Tax=Azotobact... 288 1e-76 UniRef50_Q88IB4 Transmembrane sensor, putative n=3 Tax=Pseudomon... 287 3e-76 UniRef50_A1BCE6 Putative FecR n=2 Tax=Proteobacteria RepID=A1BCE... 287 3e-76 UniRef50_A6SXA7 Fe2+-dicitrate sensor, membrane component n=1 Ta... 287 4e-76 UniRef50_B0KPG4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 286 8e-76 UniRef50_A6T3S7 Fe2+-dicitrate sensor, membrane component n=4 Ta... 285 1e-75 UniRef50_C6CDZ5 Anti-FecI sigma factor, FecR n=5 Tax=Enterobacte... 285 2e-75 UniRef50_Q39ES0 Putative FecR n=1 Tax=Burkholderia sp. 383 RepID... 284 3e-75 UniRef50_Q82TB4 Putative transmembrane sensor n=1 Tax=Nitrosomon... 284 3e-75 UniRef50_B3PJT6 Transmembrane sensor n=1 Tax=Cellvibrio japonicu... 284 4e-75 UniRef50_Q887T2 Regulatory protein, putative n=4 Tax=Pseudomonas... 282 9e-75 UniRef50_A9BW91 Anti-FecI sigma factor, FecR n=1 Tax=Delftia aci... 282 9e-75 UniRef50_B0KIR0 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 282 1e-74 UniRef50_UPI00016AFA6E putative FecR protein n=1 Tax=Burkholderi... 281 2e-74 UniRef50_D0J628 Putative FecR n=1 Tax=Comamonas testosteroni CNB... 281 2e-74 UniRef50_Q4ZTA2 FecR protein n=11 Tax=Pseudomonas RepID=Q4ZTA2_P... 281 2e-74 UniRef50_B0KNB6 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 280 5e-74 UniRef50_Q1LER3 Putative FecR n=1 Tax=Cupriavidus metallidurans ... 279 9e-74 UniRef50_Q88Q30 Transmembrane sensor, putative n=1 Tax=Pseudomon... 275 1e-72 UniRef50_B7X231 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas t... 275 1e-72 UniRef50_Q4ZM65 FecR protein n=23 Tax=Pseudomonas RepID=Q4ZM65_P... 275 1e-72 UniRef50_Q4K9E6 Sigma factor regulatory protein, FecR/PupR famil... 275 2e-72 UniRef50_B9JNI9 FecR iron sensor protein n=1 Tax=Agrobacterium r... 275 2e-72 UniRef50_C1DFE7 Anti-sigma factor, FecR family n=2 Tax=Pseudomon... 275 2e-72 UniRef50_Q0AEB9 Putative FecR n=2 Tax=Nitrosomonas RepID=Q0AEB9_... 274 3e-72 UniRef50_Q1IGG4 Putative FecR-like transmembrane sensor n=2 Tax=... 274 3e-72 UniRef50_A6VD04 Probable transmembrane sensor n=6 Tax=Pseudomona... 274 4e-72 UniRef50_A5VYE0 Anti-FecI sigma factor, FecR n=4 Tax=Pseudomonas... 272 9e-72 UniRef50_C9NLK7 Transmembrane sensor n=1 Tax=Vibrio coralliilyti... 272 1e-71 UniRef50_Q15VP5 Putative FecR n=1 Tax=Pseudoalteromonas atlantic... 271 2e-71 UniRef50_A6SZM2 Fe2+-dicitrate sensor, membrane component n=1 Ta... 271 3e-71 UniRef50_Q2RUF5 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC... 271 3e-71 UniRef50_A9BWH6 Anti-FecI sigma factor, FecR n=2 Tax=cellular or... 270 3e-71 UniRef50_A1K836 Putative transmembrane sensor n=1 Tax=Azoarcus s... 270 4e-71 UniRef50_A4VS46 Probable transmembrane sensor n=1 Tax=Pseudomona... 270 4e-71 UniRef50_Q15XC6 Putative FecR n=1 Tax=Pseudoalteromonas atlantic... 270 7e-71 UniRef50_A9VXG0 FecR protein n=6 Tax=Methylobacterium RepID=A9VX... 269 8e-71 UniRef50_A9BUB2 Anti-FecI sigma factor, FecR n=5 Tax=Proteobacte... 268 2e-70 UniRef50_Q82WU9 Putative transcriptional regulator, putative n=1... 267 3e-70 UniRef50_A6X2N0 Anti-FecI sigma factor, FecR n=1 Tax=Ochrobactru... 266 8e-70 UniRef50_A9IDD5 Transmembrane sensor n=1 Tax=Bordetella petrii D... 266 9e-70 UniRef50_Q88PI4 Transmembrane sensor, putative n=6 Tax=Pseudomon... 266 9e-70 UniRef50_B7WXN1 Anti-FecI sigma factor, FecR n=2 Tax=Comamonas t... 266 1e-69 UniRef50_A3WYF9 Putative FecR n=1 Tax=Nitrobacter sp. Nb-311A Re... 265 1e-69 UniRef50_Q48ML1 Sigma factor regulatory protein, FecR/PupR famil... 265 2e-69 UniRef50_A6W3B6 Sigma factor regulatory protein, FecR/PupR famil... 264 3e-69 UniRef50_C6DBT1 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacter... 264 3e-69 UniRef50_A3NJI2 Sigma factor regulatory protein, FecR/PupR famil... 263 5e-69 UniRef50_Q4KKG0 Sigma factor regulatory protein, FecR/PupR famil... 263 7e-69 UniRef50_Q21KS4 FecR protein n=1 Tax=Saccharophagus degradans 2-... 263 7e-69 UniRef50_D0KIJ1 Anti-FecI sigma factor, FecR n=1 Tax=Pectobacter... 263 7e-69 UniRef50_Q48JU1 FecR protein superfamily n=19 Tax=Pseudomonas Re... 263 8e-69 UniRef50_Q82W78 Putative transmembrane sensor n=1 Tax=Nitrosomon... 262 1e-68 UniRef50_Q3SSZ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb... 262 1e-68 UniRef50_C1DGX1 Anti-sigma factor, FecR-like protein n=1 Tax=Azo... 261 3e-68 UniRef50_B3PGL0 Probable transmembrane sensor n=1 Tax=Cellvibrio... 261 3e-68 UniRef50_C6XBM0 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 261 3e-68 UniRef50_B0KLJ0 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonad... 261 3e-68 UniRef50_A4Y0Z0 Putative FecR n=1 Tax=Pseudomonas mendocina ymp ... 260 3e-68 UniRef50_A6W1Y1 Anti-FecI sigma factor, FecR n=1 Tax=Marinomonas... 260 6e-68 UniRef50_Q3SN47 FecR protein n=2 Tax=Nitrobacter RepID=Q3SN47_NITWN 259 8e-68 UniRef50_Q1YUD9 Sigma factor regulatory protein, FecR/PupR famil... 259 1e-67 UniRef50_B8L6A8 Sigma factor regulatory protein, FecR/PupR famil... 258 2e-67 UniRef50_Q3SUW8 FecR protein n=3 Tax=Rhizobiales RepID=Q3SUW8_NITWN 258 2e-67 UniRef50_B7UW19 Probable transmembrane sensor n=6 Tax=Pseudomona... 258 2e-67 UniRef50_Q6FBE6 Membrane bound regulator in multi-component regu... 258 3e-67 UniRef50_C5BRF0 Transmembrane sensor n=1 Tax=Teredinibacter turn... 257 3e-67 UniRef50_Q3SUQ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb... 257 4e-67 UniRef50_B6YYD9 FecR protein n=1 Tax=Pseudovibrio sp. JE062 RepI... 257 4e-67 UniRef50_B7X445 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas t... 257 5e-67 UniRef50_UPI0001AF4CF8 FecR protein superfamily protein n=1 Tax=... 256 8e-67 UniRef50_A1BAQ4 Putative FecR n=1 Tax=Paracoccus denitrificans P... 256 1e-66 UniRef50_Q4KDP8 Sigma factor regulatory protein PupR n=2 Tax=Pse... 254 2e-66 UniRef50_C1DIF1 Anti-sigma factor protein, FecR family n=1 Tax=A... 254 2e-66 UniRef50_B2Q6M2 Putative uncharacterized protein n=2 Tax=Provide... 254 3e-66 UniRef50_Q82VI9 Putative transmembrane sensor n=1 Tax=Nitrosomon... 254 3e-66 UniRef50_A7IJ25 Anti-FecI sigma factor, FecR n=3 Tax=Alphaproteo... 254 4e-66 UniRef50_Q7W4H6 Putative inner membrane sensor for iron transpor... 253 9e-66 UniRef50_Q2KXL7 Regulator of iron dicitrate transport (Fragment)... 252 1e-65 UniRef50_B7S234 Sigma factor regulatory protein, FecR/PupR famil... 252 1e-65 UniRef50_C1DGE4 Anti-sigma factor protein, FecR family n=1 Tax=A... 251 2e-65 UniRef50_Q82WX3 Putative transmembrane sensor n=1 Tax=Nitrosomon... 251 2e-65 UniRef50_Q92NX5 Putative iron transport regulator transmembrane ... 251 3e-65 UniRef50_B6IXY0 Sigma factor regulatory protein, FecR n=1 Tax=Rh... 250 4e-65 UniRef50_Q4KBG4 Sigma factor regulatory protein, FecR/PupR famil... 250 5e-65 UniRef50_Q3SR62 FecR protein n=3 Tax=Bradyrhizobiaceae RepID=Q3S... 250 5e-65 UniRef50_A6SZL6 Fe2+-dicitrate sensor, membrane component n=1 Ta... 249 9e-65 UniRef50_Q1LPC1 Putative FecR n=1 Tax=Cupriavidus metallidurans ... 249 1e-64 UniRef50_B8KN81 CytoChrome c oxidase Cbb3-type, subunit I n=1 Ta... 249 1e-64 UniRef50_Q2RRS2 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC... 248 2e-64 UniRef50_C6X944 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 248 2e-64 UniRef50_B0KIR3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 247 3e-64 UniRef50_A9CLD9 Transmembrane sensor n=1 Tax=Agrobacterium tumef... 247 4e-64 UniRef50_C6XPM9 Anti-FecI sigma factor, FecR n=1 Tax=Hirschia ba... 247 4e-64 UniRef50_Q82WV2 Possible transmembrane sensor n=1 Tax=Nitrosomon... 247 5e-64 UniRef50_D2LKP6 Anti-FecI sigma factor, FecR n=2 Tax=Rhodomicrob... 246 5e-64 UniRef50_C6X948 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 246 7e-64 UniRef50_Q7M8T7 PUTATIVE TRANSMEMBRANE SENSOR n=1 Tax=Wolinella ... 246 8e-64 UniRef50_B7V267 Probable transmembrane sensor n=7 Tax=Pseudomona... 246 1e-63 UniRef50_B9K518 Two component sensor kinase n=1 Tax=Agrobacteriu... 245 1e-63 UniRef50_B7X004 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas t... 245 1e-63 UniRef50_C6DD79 Anti-FecI sigma factor, FecR n=5 Tax=Pectobacter... 245 1e-63 UniRef50_B4RTZ4 Putative regulatory protein n=2 Tax=Alteromonas ... 245 2e-63 UniRef50_Q3SNK9 FecR protein n=2 Tax=Nitrobacter RepID=Q3SNK9_NITWN 244 3e-63 UniRef50_Q4KBX2 Sigma factor regulatory protein, FecR/PupR famil... 243 7e-63 UniRef50_C6D936 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacter... 243 7e-63 UniRef50_Q3SQY3 Probable FecR, iron siderophore sensor protein n... 242 1e-62 UniRef50_C4SII2 Fe2+-dicitrate sensor, membrane component n=2 Ta... 242 1e-62 UniRef50_A5VYP7 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas... 242 1e-62 UniRef50_C7JHQ2 Two component sensor histidine kinase FecR/PupR ... 242 1e-62 UniRef50_Q4KI13 Sigma factor regulatory protein, FecR/PupR famil... 242 1e-62 UniRef50_B7VA52 Probable transmembrane sensor n=5 Tax=Pseudomona... 241 3e-62 UniRef50_B4WC07 Sigma factor regulatory protein, FecR/PupR famil... 240 5e-62 UniRef50_Q4KE62 Sigma factor regulatory protein, FecR/PupR famil... 240 6e-62 UniRef50_Q217A2 Putative FecR n=1 Tax=Rhodopseudomonas palustris... 239 1e-61 UniRef50_A9CFJ7 Two component sensor kinase n=1 Tax=Agrobacteriu... 238 1e-61 UniRef50_B0KMD4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 238 3e-61 UniRef50_B4S0Z9 Putative regulatory protein n=2 Tax=Alteromonas ... 237 4e-61 UniRef50_B4SJG6 Anti-FecI sigma factor, FecR n=2 Tax=Stenotropho... 237 4e-61 UniRef50_B4RFZ1 Transcriptional regulator n=2 Tax=Phenylobacteri... 236 6e-61 UniRef50_D1NXK1 Sigma factor regulatory protein, FecR/PupR famil... 236 9e-61 UniRef50_Q6FD18 Putative transmembrane sensor n=1 Tax=Acinetobac... 236 1e-60 UniRef50_D0Y1A0 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 236 1e-60 UniRef50_A5V578 Anti-FecI sigma factor, FecR n=1 Tax=Sphingomona... 235 1e-60 UniRef50_A4ABA5 Fe2+-dicitrate sensor, membrane component n=1 Ta... 235 2e-60 UniRef50_B4W7I5 Sigma factor regulatory protein, FecR/PupR famil... 235 2e-60 UniRef50_B6X9X8 Putative uncharacterized protein n=2 Tax=Provide... 234 2e-60 UniRef50_Q4KE34 Sigma factor regulatory protein, FecR/PupR famil... 234 3e-60 UniRef50_B0SXJ1 Anti-FecI sigma factor, FecR n=2 Tax=Caulobacter... 234 3e-60 UniRef50_Q2RW10 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC... 234 3e-60 UniRef50_B1KDJ5 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonad... 234 4e-60 UniRef50_B0SYA7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 234 4e-60 UniRef50_D0XU60 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 233 7e-60 UniRef50_Q3HKE5 FecR protein n=3 Tax=Rhodobacter sphaeroides Rep... 233 9e-60 UniRef50_B3PLQ9 Sigma factor regulatory protein, FecR/PupR famil... 233 9e-60 UniRef50_A6T0L2 Fe2+-dicitrate sensor, membrane component n=1 Ta... 232 1e-59 UniRef50_Q07HV9 Putative FecR n=2 Tax=Rhodopseudomonas palustris... 232 1e-59 UniRef50_Q0C5P1 Sigma factor regulatory protein, FecR/PupR famil... 232 1e-59 UniRef50_Q4KAZ6 Sigma factor regulatory protein, putative n=1 Ta... 231 2e-59 UniRef50_A4C3P5 Putative regulatory protein n=1 Tax=Pseudoaltero... 231 3e-59 UniRef50_D1B2C8 FecR protein n=1 Tax=Sulfurospirillum deleyianum... 231 4e-59 UniRef50_C6XBX5 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 231 4e-59 UniRef50_B0T8M8 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 230 4e-59 UniRef50_B0T5T9 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 230 5e-59 UniRef50_B4EXQ7 FecR-like transcriptional regulator n=4 Tax=Prot... 230 5e-59 UniRef50_B0SVT6 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 230 5e-59 UniRef50_B1ZHY6 Anti-FecI sigma factor, FecR n=2 Tax=Methylobact... 229 7e-59 UniRef50_A9CF44 Two component sensor kinase n=1 Tax=Agrobacteriu... 229 7e-59 UniRef50_Q2KUB5 Heme uptake transmembrane sensor n=2 Tax=Bordete... 229 8e-59 UniRef50_B1ZTJ9 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus te... 229 8e-59 UniRef50_B8H3N4 FecR family protein n=3 Tax=Caulobacter RepID=B8... 229 9e-59 UniRef50_B2HV65 Fe2+-dicitrate sensor, membrane component n=5 Ta... 229 1e-58 UniRef50_C6X7E8 Anti-FecI sigma factor, FecR n=1 Tax=Methylovoru... 229 1e-58 UniRef50_B0KIQ3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 228 2e-58 UniRef50_B4WBG4 Sigma factor regulatory protein, FecR/PupR famil... 227 4e-58 UniRef50_A5V4S3 Anti-FecI sigma factor, FecR n=1 Tax=Sphingomona... 227 4e-58 UniRef50_C1DGN9 PupR/FecR-like anti-sigma factor protein n=1 Tax... 227 4e-58 UniRef50_Q7WEI1 Heme uptake transmembrane sensor n=2 Tax=Bordete... 227 4e-58 UniRef50_Q5R0S8 Iron-dicitrate sensor, membrane component n=1 Ta... 227 4e-58 UniRef50_Q4KD29 Sigma factor regulatory protein, FecR/PupR famil... 226 6e-58 UniRef50_Q1I5S1 Putative FecR-like transmembrane sensor n=1 Tax=... 226 1e-57 UniRef50_Q82VA6 Putative transmembrane sensor n=1 Tax=Nitrosomon... 226 1e-57 UniRef50_Q3SU82 FecR protein n=5 Tax=Rhizobiales RepID=Q3SU82_NITWN 225 2e-57 UniRef50_B0KMC5 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas... 225 2e-57 UniRef50_C5SQ91 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 224 3e-57 UniRef50_B6QYF1 FecR protein, putative n=1 Tax=Pseudovibrio sp. ... 224 3e-57 UniRef50_B1KES8 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonad... 224 4e-57 UniRef50_B1J3A1 Anti-FecI sigma factor, FecR n=6 Tax=Pseudomonas... 224 4e-57 UniRef50_Q4K5N6 Sigma factor regulatory protein, FecR/PupR famil... 223 5e-57 UniRef50_A7ADL3 Putative uncharacterized protein n=2 Tax=Parabac... 223 6e-57 UniRef50_B6ITM8 Sigma factor regulatory protein, FecR n=1 Tax=Rh... 223 7e-57 UniRef50_A7AIX9 Putative uncharacterized protein n=2 Tax=Parabac... 223 1e-56 UniRef50_Q88P46 Transmembrane sensor, putative n=12 Tax=Pseudomo... 222 1e-56 UniRef50_D0XTD7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter... 222 1e-56 UniRef50_Q213I4 Putative FecR n=2 Tax=Rhodopseudomonas palustris... 222 2e-56 UniRef50_Q8PKI1 Two-component system sensor protein n=1 Tax=Xant... 222 2e-56 UniRef50_C1DDL2 Anti-sigma factor, FecR family n=1 Tax=Azotobact... 221 2e-56 UniRef50_Q6NA51 Probable FecR, iron siderophore sensor protein n... 221 2e-56 UniRef50_Q15XS4 Putative FecR n=1 Tax=Pseudoalteromonas atlantic... 221 2e-56 UniRef50_C5SN43 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 221 2e-56 UniRef50_Q1YSL3 Putative regulatory protein n=1 Tax=gamma proteo... 221 3e-56 UniRef50_A6KXE2 Putative anti-sigma factor n=9 Tax=Bacteroidales... 221 3e-56 UniRef50_B4SL41 Fe2+-dicitrate sensor, membrane component n=3 Ta... 221 3e-56 UniRef50_C5SKV9 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 221 3e-56 UniRef50_Q1N723 Regulatory protein PupR, putative n=1 Tax=Sphing... 220 5e-56 UniRef50_B8L287 Anti-FecI sigma factor, FecR n=1 Tax=Stenotropho... 220 5e-56 UniRef50_Q4KAM0 Sigma factor regulatory protein, FecR/PupR famil... 220 6e-56 UniRef50_A6SZB6 Fe2+-dicitrate sensor, membrane component n=1 Ta... 219 9e-56 UniRef50_B4WD83 Sigma factor regulatory protein, FecR/PupR famil... 219 1e-55 UniRef50_A8ICQ2 Putative iron siderophore sensor protein n=1 Tax... 218 2e-55 UniRef50_UPI0001BC82A8 putative anti-sigma factor n=1 Tax=Bacter... 218 2e-55 UniRef50_D0XPS8 Anti-FecI sigma factor, FecR n=1 Tax=Brevundimon... 218 2e-55 UniRef50_B3QG97 Anti-FecI sigma factor, FecR n=5 Tax=Bradyrhizob... 218 3e-55 UniRef50_A6T0M6 Fe2+-dicitrate sensor, membrane component n=1 Ta... 218 3e-55 UniRef50_A6LH79 Putative anti-sigma factor n=1 Tax=Parabacteroid... 218 3e-55 UniRef50_Q6NA38 Probable FecR, iron siderophore sensor protein n... 217 3e-55 UniRef50_A4JPI9 Putative FecR n=4 Tax=Burkholderia RepID=A4JPI9_... 217 4e-55 UniRef50_B7VA09 Probable transmembrane sensor n=6 Tax=Pseudomona... 217 5e-55 UniRef50_C7JHQ5 Two component sensor histidine kinase FecR/PupR ... 217 5e-55 UniRef50_C4TZ43 Two-component system sensor protein n=4 Tax=Yers... 217 6e-55 UniRef50_Q79AD3 HasS protein n=1 Tax=Serratia marcescens RepID=Q... 216 6e-55 UniRef50_Q4KGY2 Sigma factor regulatory protein, FecR/PupR famil... 216 6e-55 UniRef50_A6KXP7 Putative anti-sigma factor n=6 Tax=Bacteroides R... 216 6e-55 UniRef50_Q2L2C5 Transmembrane sensor protein n=1 Tax=Bordetella ... 216 7e-55 UniRef50_B7BE29 Putative uncharacterized protein n=1 Tax=Parabac... 216 7e-55 UniRef50_Q1NEQ4 Two-component system sensor protein n=1 Tax=Sphi... 216 8e-55 UniRef50_Q13G72 Putative FecR n=1 Tax=Burkholderia xenovorans LB... 216 9e-55 UniRef50_Q5LHX2 Putative anti-sigma factor n=4 Tax=Bacteroides R... 216 9e-55 UniRef50_Q82WW5 Possible transmembrane sensor n=2 Tax=Nitrosomon... 216 1e-54 UniRef50_B1ZXK1 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus te... 215 1e-54 UniRef50_B8H128 FecR family protein n=3 Tax=Caulobacter RepID=B8... 215 1e-54 UniRef50_C7JBI1 Two component sensor histidine kinase FecR/PupR ... 215 1e-54 UniRef50_Q48AA2 Putative regulatory protein n=1 Tax=Colwellia ps... 215 2e-54 UniRef50_C5SMT1 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaul... 215 2e-54 UniRef50_A3UKH4 Transcriptional regulator, putative n=1 Tax=Ocea... 214 3e-54 Sequences not found previously or not previously below threshold: >UniRef50_P23485 Protein fecR n=30 Tax=Enterobacteriaceae RepID=FECR_ECOLI Length = 317 Score = 347 bits (892), Expect = 2e-94, Method: Composition-based stats. Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL Sbjct: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR Sbjct: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL Sbjct: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST Sbjct: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL Sbjct: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 Query: 301 PVKIQSITRYWINISPL 317 PVKIQSITRYWINISPL Sbjct: 301 PVKIQSITRYWINISPL 317 >UniRef50_A6T3T9 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T3T9_JANMA Length = 340 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 125/317 (39%), Positives = 176/317 (55%), Gaps = 8/317 (2%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 R R A+ W A L + S + A ++W D +++ AWQ+ + + + G VP Sbjct: 20 PIDRAIAREAAQWLASLYDGQ-SEEDIAACKRWRAADPEHERAWQRAQRINQKFGIVPKA 78 Query: 67 VASRAL-HDTRLTRRHVMKGLLLLL-GAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 V AL R+ RR +K LL+L+ A G+ ++ + ADYRTAKG QL Sbjct: 79 VGLPALGRKVRVDRRRAIKTLLVLMMAAPVGYVSYRYAPWVAMTADYRTAKGEHREIQLA 138 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQGQLTALG 181 DG+ + L T ++ D+ FD QR +RL GEI + T D+ RPF V T G + ALG Sbjct: 139 DGTRVHLGTATSIDIEFDGAQRLLRLHAGEIEVRTGSDSGHPAYRPFIVKTTHGYIRALG 198 Query: 182 TEFTVRQQDNFT--QLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 T F VR+ + T ++ V +HAVE+ +A + ++NAG+ +F+ S F V+ LD Sbjct: 199 TRFVVRRDEGATTTRVSVLEHAVEIRPQAASGKLIVLNAGQQTRFNESGFEQVEALDPHV 258 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 WT +L S L E A L RYR G+LRCDPAVAGLR++G F L NTD ILN + T Sbjct: 259 ADWTSGVLFASRMRLDEFAAELNRYRPGLLRCDPAVAGLRITGAFQLDNTDNILNALPDT 318 Query: 300 LPVKIQSITRYWINISP 316 LPV++ TRYW+ I P Sbjct: 319 LPVEVLFRTRYWVTIVP 335 >UniRef50_Q7N8I4 Similarities with probable transmembrane sensor n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N8I4_PHOLL Length = 337 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 113/311 (36%), Positives = 171/311 (54%), Gaps = 7/311 (2%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 + L A+ W +L S W Q ++ AW+ + L +L +P +AS Sbjct: 26 EKILAEAAEWLTILHDSHASEADRNACAAWCAQSPEHAQAWEHAQCLLARLHHLPPHIAS 85 Query: 70 RALH-DTRLTRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 L+ L+RR ++ L+LL+ AG W+S+ + L DY T G + L D Sbjct: 86 PLLNNKQPLSRREAIRKLTLMLLIPAGASSLFWRSDQFQLLTGDYHTQTGQIQHWSLPDN 145 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTALGTEF 184 S LTLNTQS+ DV +D QR + L GEI I T KD RPF+V T+QG + ALGT+F Sbjct: 146 SQLTLNTQSSTDVHYDDTQRLISLKLGEIYIETHKDNRHPARPFKVQTKQGVIVALGTKF 205 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 +VRQQ + Q+++ + AV + + I++AGE+ F+ S SW + Sbjct: 206 SVRQQASHAQVEIVEGAVRITPDN--GLPHILHAGEATHFTQFTVAPQHTRSITSLSWLQ 263 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 ++ + PL V+ L RYR+G++RCD AVA LR+SG FPL++TD L+++ QT P+ I Sbjct: 264 GMMVADNLPLATVVTELNRYRSGIIRCDDAVAHLRVSGAFPLRDTDLALHMLLQTYPLSI 323 Query: 305 QSITRYWINIS 315 + +TRYWI ++ Sbjct: 324 RRLTRYWITLT 334 >UniRef50_A6T180 Fe2+-dicitrate sensor, membrane component n=3 Tax=Betaproteobacteria RepID=A6T180_JANMA Length = 341 Score = 315 bits (809), Expect = 9e-85, Method: Composition-based stats. Identities = 108/334 (32%), Positives = 181/334 (54%), Gaps = 18/334 (5%) Query: 1 MNPLLT-----DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVEN 55 M+ + ++ + A+ W L + V+ +WQ+W + D+ AWQ++E Sbjct: 9 MSAHMPLQSAAAIPQEVRKRAAEWLVELQADTVTDDTRKQWQRWRDAHPDHLRAWQKIEA 68 Query: 56 LRNQLGGVPGDVASRALHDT-RLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRT 113 +L + +A AL RR +K L ++L AGG W + + AD RT Sbjct: 69 FGEKLQTLSSPLAHAALTTPGSAGRRQAIKTLAIMLFAGGTTWLVEEQLPWRQWSADRRT 128 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ------RP 167 G + L DG+LL LN +++ D+ + QR VRL G+I ITTA D Q RP Sbjct: 129 GVGERATITLADGTLLELNAETSVDIHYSDTQRIVRLLSGDIMITTAHDPRQASGGKARP 188 Query: 168 FRVLTRQGQLTALGTEFTVRQQ----DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 F V TRQG + ALGT+F+V+Q+ +++ V + AVE+ + + RI+ AG+ Sbjct: 189 FLVETRQGSIRALGTQFSVQQRNEQRGGASKVSVFEGAVEIRP-NLKGEARILQAGQQTS 247 Query: 224 FSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGT 283 F+A F A++ +D+ T+W + ++ D PL + + L YR G + CD +A L ++GT Sbjct: 248 FTADGFSAIEAVDEAVTAWRQGMIVAQDLPLRDFLKELGNYRPGHIDCDDKIAQLPVTGT 307 Query: 284 FPLKNTDAILNVIAQTLPVKIQSITRYWINISPL 317 +PLK+TD +L+++ TLP++++ +TRYW+ + + Sbjct: 308 YPLKDTDKVLDMLQTTLPLQVRFVTRYWVTLHAV 341 >UniRef50_Q82VT5 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82VT5_NITEU Length = 347 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 108/322 (33%), Positives = 166/322 (51%), Gaps = 8/322 (2%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 P +Q A+ W +L + A+WQQW + D++ AWQ +E Q+ Sbjct: 21 TPEGPPLPKQVTLQAAKWLVMLQAPNTTQATRAKWQQWRDVHPDHERAWQHIEASATQMR 80 Query: 62 GVPGDVASRALHD----TRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKG 116 + +A L R RR +K L ++ G W L + AD+RTA Sbjct: 81 AMHSPLAHGTLIRDDTEKRHARRRAIKLLGVIAFTGTSTWLLRDNPVWREWHADHRTATS 140 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTR 173 L DG+ + LNT S DV FD R V L GEI +TTA D+ +PF V T Sbjct: 141 ERRTIVLADGTRIMLNTASIIDVHFDNAIRLVTLIRGEILVTTAPDSASGTGQPFIVETD 200 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 QG+L ALGT F VRQ++N + + + + VE+ A A Q R++ AGE + F+ + + Sbjct: 201 QGRLRALGTRFAVRQRENDSHVSLFEGMVEIRPADASDQARVLQAGEQISFTRNAIETPQ 260 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 +D + SW +L + PL + I L RYR G L CDP ++ L++SG +P+++T+ +L Sbjct: 261 TIDTHAASWVTGMLVVQEMPLTDFIDELARYRPGYLSCDPELSHLKVSGIYPIEDTERVL 320 Query: 294 NVIAQTLPVKIQSITRYWINIS 315 +++ P++I S+TRYW+ I Sbjct: 321 DMLLHVHPIEIYSLTRYWVAIR 342 >UniRef50_Q1GXU4 Putative FecR n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXU4_METFK Length = 320 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 117/320 (36%), Positives = 172/320 (53%), Gaps = 6/320 (1%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M PL D L A+ W + + +A ++W Q + ++ AWQ+ + + Sbjct: 1 MKPL--DIDPSILEQAADWLVQMHSGEGNAVNDAEIERWRSQSEQHEVAWQRAQQFIGIV 58 Query: 61 GGVPGDVASRALHDT--RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 +P ++ AL RR + K +LL + WQ W+++ G +DY A G Sbjct: 59 HTLPPELGKAALQRPVSPARRRAIKKLAVLLALSPAAWQAWRTQPWLGYTSDYHVATGRQ 118 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQ 176 +L DG+ L LNT ++ DV +D HQR VRL GE+ ITTA D RPFRV TR G Sbjct: 119 QHIKLADGTALVLNTATSIDVIYDQHQRLVRLKRGELHITTATDPSGRNRPFRVQTRDGM 178 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ALGT F++RQ D+ + L V AVE+ S+P +K I+ AG +F A + +P+ Sbjct: 179 ARALGTRFSIRQLDHSSHLAVFDSAVEITPKSSPNRKTIIQAGSQTEFGAMDVQQPRPVS 238 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 + +WT +L D+PL V+ L RY GVLRC P + LR+SGTFPL LN++ Sbjct: 239 EAQEAWTHGMLVVRDQPLAAVVDELRRYHVGVLRCHPDIGRLRVSGTFPLTEIGRTLNLL 298 Query: 297 AQTLPVKIQSITRYWINISP 316 +TLP+ + ++ YWIN+SP Sbjct: 299 QRTLPISVARVSPYWINLSP 318 >UniRef50_B3PJT3 Transmembrane sensor n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJT3_CELJU Length = 332 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 112/320 (35%), Positives = 171/320 (53%), Gaps = 13/320 (4%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 R A WY +++ + + + + W + AW +++++RN L GVPG++ Sbjct: 11 IDPDIRRQAIAWYVLMNSGEATAAERSACEHWLALHPQHADAWSRLDSVRNALAGVPGNI 70 Query: 68 ASRALHDTRLTRRHVMKGLL-LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 A L RR ++KG L LG G G +W+ + AD++T G + L+DG Sbjct: 71 AIPTLTGGNTNRRGLLKGGAWLALGLGSGALMWREQPWRTYMADFKTRTGEQRQFTLDDG 130 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD-----------ALQRPFRVLTRQG 175 S L LNT + D+RF H R + L +GE+ I TA D RPF + T QG Sbjct: 131 SQLLLNTDTQIDLRFSNHTRLLHLLHGEVLIQTAADQSGSFDESRSRKASRPFEIQTAQG 190 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 ++ ALGT F VR Q ++T + V +HAVE+ L + A + AG+ ++FS +P+ Sbjct: 191 RIRALGTRFVVRDQQDYTLVTVLEHAVEIRLQNRSA-PVRLEAGQQVRFSRERVEQPQPV 249 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W L+ +D+PLGEVI L RYR G+LR P + +R+SG FP+K+TD L V Sbjct: 250 SANADAWVHGQLAVNDQPLGEVITELARYRPGILRISPEASAIRVSGVFPVKDTDRTLAV 309 Query: 296 IAQTLPVKIQSITRYWINIS 315 +A P++I + T YWI I Sbjct: 310 LASRFPIRINATTPYWIRIE 329 >UniRef50_C6XE50 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE50_METSD Length = 333 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 110/319 (34%), Positives = 163/319 (51%), Gaps = 7/319 (2%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 L+ A+ W+A+L QQ A WQ W EQD ++ AWQQVE++ + V Sbjct: 10 RMSPSYATLQQAAEWFAMLHAGEFDAQQRAAWQAWLEQDNTHRMAWQQVESVLRKFQHVE 69 Query: 65 GDVASRALHDTRLTRRHVMKGLLLL-LGAGGGWQLWQSETGEGL----RADYRTAKGTVS 119 D A + L RR +K ++ L L + GGW + + + A + T G Sbjct: 70 DDAARQTLRTISQGRRRAVKSIMALCLLSAGGWGIARQPAVQQWSGILMAQHTTRIGERR 129 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQL 177 R QL DGS+L +NT SA ++ + + + + L GE+ + TA D +Q RPF + TR G+L Sbjct: 130 RMQLADGSILWMNTASAINMHYSSKEPRIELIAGEVWVQTATDPMQPGRPFLISTRHGEL 189 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT F V + + V + AV + L A IV AGE F D Sbjct: 190 QALGTRFNVLDDGQCSHVAVFEGAVAIRLPQAGQPGLIVQAGEQSSFDGISIRPAHEADP 249 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 SWT +L + PL E ++ L RYR G L DPA++ LR+ G FPL++TD L+++ Sbjct: 250 AMESWTHGMLVADNLPLPEFVSRLERYRRGHLGYDPALSHLRIVGAFPLQDTDRALHLLE 309 Query: 298 QTLPVKIQSITRYWINISP 316 QTLPV++ + +W+ + P Sbjct: 310 QTLPVRVHRLLPWWVTLEP 328 >UniRef50_C3K1F9 Putative iron transport-related protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K1F9_PSEFS Length = 314 Score = 312 bits (801), Expect = 9e-84, Method: Composition-based stats. Identities = 125/314 (39%), Positives = 174/314 (55%), Gaps = 2/314 (0%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + R+ +A+ WY + + + WQQW D +Q AW Q+E L+ LG +P Sbjct: 1 MAAPDRKTFEAAASWYVQFQSQTPTAAERHAWQQWLNGDPSHQAAWNQMEQLQRSLGALP 60 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 D RAL T RR V+K +L+L G G GW + Q + ADYRT+ G R +L Sbjct: 61 QDFTRRALS-TSQQRRQVLKWMLVLGGTGYLGWNVQQHTPLGNVWADYRTSVGERRRVEL 119 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DG+ + LNT++A DV FD QR +RL GE+ I T K Q PF V TRQG++ ALGT Sbjct: 120 ADGTRIDLNTRTAIDVVFDGRQRLIRLREGEVLIHTGKRGGQTPFYVETRQGRIQALGTT 179 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F VRQ + T++ V + V V P+ R+++AGES F G +W Sbjct: 180 FNVRQLPDSTRVGVLEDRVSVAPGDQPSHARLLSAGESADFDRQHVGVNHAYRSSQAAWV 239 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L + LGEVI L RYR GVL+CD A A LR+SGTF L +TDA+L + TLP++ Sbjct: 240 DGQLIVLNARLGEVIEDLARYRPGVLQCDLASARLRVSGTFRLDSTDAVLANLQATLPIQ 299 Query: 304 IQSITRYWINISPL 317 ++ TRYW+++ + Sbjct: 300 VKYFTRYWVSVKRI 313 >UniRef50_Q4KED4 Sigma factor regulatory protein FecR n=2 Tax=Pseudomonas RepID=Q4KED4_PSEF5 Length = 323 Score = 310 bits (794), Expect = 5e-83, Method: Composition-based stats. Identities = 125/307 (40%), Positives = 193/307 (62%), Gaps = 2/307 (0%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 RQA+ A+ WYA L S Q++A W++W D ++ AW++++ L Q+ +PG +A Sbjct: 12 ERQAISGAARWYAQLRSGSASEQEQAAWREWLAADPLHRQAWERMQQLGEQMSALPGGLA 71 Query: 69 SRALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 L +RR +M+ L++L AG GW W+S++ + L ADYRT G + +L DG+ Sbjct: 72 GSTLRGAGRSRRELMRNLVVLASAGSLGWLGWRSDSAQQLLADYRTQIGERRQVRLADGT 131 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 L LNT ++ +V+FD+ QR V+L +GE+ ++TA D LQRPFRV TR ++ ALGT F +R Sbjct: 132 SLLLNTNTSINVQFDSQQRKVQLLWGEMLVSTAADPLQRPFRVFTRDAEVLALGTRFVLR 191 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 + Q+ V +HAV+V L + A R V AG+ L FSA F A++P D +W + + Sbjct: 192 SDEREEQVAVLEHAVQVSLGAGLA-PRRVEAGQQLAFSAGGFAALRPNDAAVGAWRQGSI 250 Query: 248 SFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 D+PLGE++A L+RYR GV++CDP +AGL++SG FP+ +TD L + ++I+ Sbjct: 251 IAIDRPLGELLADLSRYRRGVVQCDPQIAGLKISGAFPIDDTDRALAALESGFSLQIKRY 310 Query: 308 TRYWINI 314 TRYW+ + Sbjct: 311 TRYWVRV 317 >UniRef50_A6SVZ8 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SVZ8_JANMA Length = 334 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 113/320 (35%), Positives = 166/320 (51%), Gaps = 8/320 (2%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV- 63 Q + A W L A WQ+W D +++ AW +E++ QL G Sbjct: 6 TASLNPQVIDKAVEWLVHLWSGSADLDSRAAWQKWRAADPEHERAWLHIEDVNQQLRGRM 65 Query: 64 ----PGDVASRALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTV 118 + +RR +K +++ G W ++ + L ++ RTA G Sbjct: 66 NGVSADTAIASIAQPASRSRRKALKTFSVVVTVGTAAWLSSETMLWKTLTSEIRTATGER 125 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQ 176 +L DG+ L LNT +A +VR+D+ R V+L GE+ ITTAKD+ RPF T G+ Sbjct: 126 LNFKLADGTQLELNTDTAVNVRYDSALRLVQLVRGELLITTAKDSVSPARPFMAETVAGR 185 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 + ALGT+FTVRQ + +Q+ V + AVE++ A+ P Q ++AG++ F+A Sbjct: 186 ILALGTKFTVRQDGDISQVAVLEGAVELIPANNPGQVVRLDAGQAGSFNAEGALTPPQAI 245 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 +WT+ +L SD L + IA L RYR G L CDPA AGLRLSG FPL + IL + Sbjct: 246 SAQAAWTEGVLIASDMRLDDFIAELKRYRPGHLSCDPASAGLRLSGVFPLNDMQKILTSL 305 Query: 297 AQTLPVKIQSITRYWINISP 316 + LPV++Q+ TRYW I P Sbjct: 306 TEVLPVRVQTFTRYWTRIVP 325 >UniRef50_A9C159 Anti-FecI sigma factor, FecR n=2 Tax=cellular organisms RepID=A9C159_DELAS Length = 353 Score = 303 bits (777), Expect = 5e-81, Method: Composition-based stats. Identities = 119/332 (35%), Positives = 168/332 (50%), Gaps = 16/332 (4%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 ++ + + A WYA L + A WQ+W+E ++Q AW+ + L++ L Sbjct: 22 TTTPAQAQARIRQEAIAWYARLCSGDATDADRAAWQRWHEAHPEHQRAWRHFDALQSMLQ 81 Query: 62 GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG-----EGLRADYRTAKG 116 VPG +A+ L +R +RR V++G+ L+G+G L G ADYRT G Sbjct: 82 RVPGHLAASTLQASRRSRRRVLRGIGALVGSGAVAGLSWQLAGGQGGVRSWLADYRTGTG 141 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--------ALQRPF 168 L DGS LTLNT+++ DV D +R + L GEI + TA RPF Sbjct: 142 ERRTVTLADGSELTLNTRTSVDVSMDPVRRLLVLREGEILVQTAHSLSGPGAGAKDGRPF 201 Query: 169 RVLTRQGQLTALGTEFTVRQQDN---FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS 225 V T QG++ ALGT FTVR Q T + V Q AVE+ P++ + AG+ FS Sbjct: 202 MVHTPQGRILALGTRFTVRSQGGAGGDTVVSVLQDAVEIQPLQDPSRSLRLQAGQQANFS 261 Query: 226 ASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFP 285 + + D SW L L +V+ L RYR G L CDPAVAGLR+SG FP Sbjct: 262 RNGMLPAQAADPAQVSWVGGSLIVDGWRLDDVVRELARYRPGRLACDPAVAGLRVSGVFP 321 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINISPL 317 L +TD L VI + PV+ ++RYW+ + P+ Sbjct: 322 LADTDKALAVITRAFPVRAAGLSRYWLTLVPV 353 >UniRef50_A6T3T5 Fe2+-dicitrate sensor, membrane component n=2 Tax=Betaproteobacteria RepID=A6T3T5_JANMA Length = 329 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 123/328 (37%), Positives = 170/328 (51%), Gaps = 15/328 (4%) Query: 1 MNPLLT----DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL 56 M+ L D Q R A W L VS Q W Q D+ AWQ++E++ Sbjct: 1 MSALPPESTLDVSPQIARRAVEWLVALQSGDVS---REALQAWLAQHPDHVRAWQRIESV 57 Query: 57 RNQLGGVPGDVASRALH-----DTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRAD 110 N+L GV + + H RR +K L G + + AD Sbjct: 58 NNKLRGVASPLTTALAHATLTAPRSNKRRAAIKTLATFFFVGATAYMAEEYLPWRAWSAD 117 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPF 168 RTA G L DG+ L LNT +A +VRF +R V L +GEI ITTAKDAL+ RPF Sbjct: 118 ERTALGERRTIVLVDGTELVLNTDTAVNVRFTEQERRVVLLWGEIMITTAKDALELPRPF 177 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 V T QG+L +GT F VRQQ ++LDV + AVE+ KR++ AG+ +QF+ Sbjct: 178 VVQTAQGELQPVGTRFVVRQQTEVSRLDVFEGAVEIRPKDGAGLKRVIQAGQRVQFTHDG 237 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN 288 L + +WT+ ++ S L + +A L+RYR G L CDPA+A +R+SG++PL + Sbjct: 238 ISDPVILKSDDGAWTEGMIVASGMRLQDFLAELSRYRRGRLTCDPAIADMRVSGSYPLTD 297 Query: 289 TDAILNVIAQTLPVKIQSITRYWINISP 316 TD IL + TLPV+I +TRYW+ I P Sbjct: 298 TDLILTALGSTLPVEIHFMTRYWVTIRP 325 >UniRef50_C3K7W7 Putative iron uptake regulator protein n=2 Tax=Proteobacteria RepID=C3K7W7_PSEFS Length = 317 Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 112/322 (34%), Positives = 161/322 (50%), Gaps = 12/322 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MNP + L A+ W L + + QW + + AWQ+ E + Sbjct: 1 MNPSIDPL---ILGEAADWMVQLQSGSATDEDRRAIAQWQGRSAQHAQAWQRAEAILGDF 57 Query: 61 GGVPGDVA----SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKG 116 VPG +A R L RR + LLL W ++ + + AD TA G Sbjct: 58 NSVPGAIAGDTLKRIGRKQSLGRRQALGLLLL--AGPATWLAYRQKPWQPWTADQHTAIG 115 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQ 174 L DG+ L +NT S+ ++ F R + L GE+ ITTAKD R F V TR Sbjct: 116 EQRHLTLPDGTRLLINTASSLNIAFTDQVRRIELLQGEVMITTAKDPAPRHRAFIVQTRH 175 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G ALGT F+VR + +++ V AVE+L A I+ AGE F + AV+P Sbjct: 176 GTARALGTHFSVRVAEQSSRVAVLDGAVEMLPEHARHG-LILKAGEQSAFGSDGVAAVQP 234 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 L+ +T+W +L L +++ L RYR+GVLRC +VAGL +SG FPL++TDA L Sbjct: 235 LEISATTWENGMLLAQQMRLADLLDELGRYRHGVLRCHDSVAGLTVSGAFPLRDTDASLR 294 Query: 295 VIAQTLPVKIQSITRYWINISP 316 ++ +TLPVK+ S+T YW+ + P Sbjct: 295 LLQETLPVKVSSLTGYWVTVEP 316 >UniRef50_B0KIL8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas RepID=B0KIL8_PSEPG Length = 307 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 121/306 (39%), Positives = 169/306 (55%), Gaps = 4/306 (1%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 ++ L A WY L VS WQ W D + AWQ++E L+ +LG P +A Sbjct: 2 KRTLAQAVDWYVRLHDSAVSDTTRREWQAWLAADPQHAQAWQRIEQLQQRLGQAPAGLAG 61 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 L R RR +K L +LLG G W+ ADY T G L DGS L Sbjct: 62 TTLEQARQQRRAAVKMLAMLLGVGVVG--WRGYQVSPWGADYSTRVGQRRHFTLADGSRL 119 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 L+T S ADV+FD QR + L GEI + TAKD RP V T +G++ ALGT FTVRQ Sbjct: 120 VLDTDSRADVQFDGTQRLIVLHQGEILVETAKDT--RPLSVQTAEGRVLALGTRFTVRQG 177 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSF 249 +++ V+ HAVEV A Q AG+++ F+A G + P + ++WT+ +L Sbjct: 178 AGISRVTVEAHAVEVQPRLAIGQTLRAEAGQAVSFTADTAGPLLPAVAQGSAWTQGMLVV 237 Query: 250 SDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 D L +V+A L+RYR+G L C P VAGLRLSGTF L +++ +L + +LPV+++ +TR Sbjct: 238 VDWRLEDVVAELSRYRHGYLGCAPEVAGLRLSGTFLLDDSEGVLANLEDSLPVRLRRLTR 297 Query: 310 YWINIS 315 YW+ + Sbjct: 298 YWVRVE 303 >UniRef50_C6XBX0 Anti-FecI sigma factor, FecR n=4 Tax=Proteobacteria RepID=C6XBX0_METSD Length = 333 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 113/326 (34%), Positives = 159/326 (48%), Gaps = 14/326 (4%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + L L A+ WYA L S + ARWQ W +++Q AWQ VE++ L Sbjct: 7 SNLQPAPSHAVLTQAAEWYARLRDGSASSHETARWQAWLHAAEEHQAAWQYVEDISRGLD 66 Query: 62 GVPGDVASR-------ALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEG----LRA 109 + V R H TRR V+ L L G G W+ A Sbjct: 67 PLRTTVDPRQTTHALTKAHARLHTRRRVLITLAALASGGTLGLLSWRQSMLPASMLAWTA 126 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 D+RT G L DG+ L LNT SA +V F A +R + L GE+ I TA D RPF Sbjct: 127 DHRTPTGEQRTLTLADGTQLWLNTASALNVHFSASERRIELVQGEVFIETAHDET-RPFL 185 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V T G++ ALGT F V + TQLDV AVE+ AS A R+V AG+ +F ++ Sbjct: 186 VETPHGRMRALGTRFNVYLNEAHTQLDVYAGAVEIRTAS-SAISRVVRAGQQSRFDRADI 244 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 A+ +WT+ IL + PL +V+ L RYR G L VA L++ G+FPL++T Sbjct: 245 TAMATAGAAREAWTQGILVADNIPLRDVVQELRRYRPGHLGVADGVAELKVYGSFPLQDT 304 Query: 290 DAILNVIAQTLPVKIQSITRYWINIS 315 D +L ++A LP++++ +W + Sbjct: 305 DRVLRMLASALPIRVEQPLPWWTTLE 330 >UniRef50_A6V0K5 Probable transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=A6V0K5_PSEA7 Length = 317 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 110/316 (34%), Positives = 172/316 (54%), Gaps = 6/316 (1%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P Q A W L G + WQ+W + +++ AW+ +E + +L G Sbjct: 4 PAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAG 63 Query: 63 VPGDVASRALHDTR-LTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSR 120 + +A ++ R RR +K LL++L AGGG W L ++ + + ADY T+ G R Sbjct: 64 IGTPLALAVVNAPRSAQRRRALKTLLVMLAAGGGAWGLRENGSLQRWSADYATSVGERRR 123 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS + LN+ +A DVRFDA +R + L GEI ++T D RP V + +G+L + Sbjct: 124 LALADGSRVELNSDTAVDVRFDAGERRLLLLRGEIQLSTGHDP--RPLHVYSAEGRLRPV 181 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F VRQ T++ V + AV+V + Q ++ +G L F GA +PL S Sbjct: 182 GTRFDVRQFAGRTRVAVHEGAVQVE--NRGGQGLLLPSGRQLDFDRERLGAPQPLPVGSG 239 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +WT +L + L E +A ++RYR G L CDP + GLR+SG++PL +++ IL + L Sbjct: 240 AWTDGMLVAAGMRLDEFLAEVSRYRPGRLGCDPRIGGLRISGSYPLDDSERILATLPTVL 299 Query: 301 PVKIQSITRYWINISP 316 PV+++ +TRYW+ + P Sbjct: 300 PVEVRRVTRYWVGVHP 315 >UniRef50_B4X4W9 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4W9_9GAMM Length = 327 Score = 300 bits (768), Expect = 5e-80, Method: Composition-based stats. Identities = 107/326 (32%), Positives = 160/326 (49%), Gaps = 14/326 (4%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P L+ A+ W+A + E V Q +WQ W ++Q AW VE + + Sbjct: 2 PQPDLPAHHILQQAAQWFATMLDEDVRQQDRDQWQAWLNAHPEHQRAWHYVEQVGQRFQQ 61 Query: 63 VPGDVA----SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG--------LRAD 110 + +HDTR +R L L + W +W T G L AD Sbjct: 62 AQQQAGTTGARQIIHDTRSSRITRRTLLGSGLASVATWLIWSQTTLPGTARQLAHTLSAD 121 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 YRTA G + L DG L LNT +A D+ + R ++L GEI I TAKDAL RPF V Sbjct: 122 YRTATGEQRQLTLSDGGQLWLNTATAVDISYTDTIRHIKLRDGEILIETAKDALARPFVV 181 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 T QG L ALGT F+V+Q+D TQ+ V + AVE+ + Q+ + AGE F+AS Sbjct: 182 TTLQGSLRALGTRFSVQQRDANTQISVYEGAVEINATT--GQRLTLQAGEQTSFTASAIA 239 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTD 290 +W + ++ + L E++ L+RYR+G L D +VA L++ GT+P+ D Sbjct: 240 KPHKAQHSRVAWQQGLIVADNISLQELVEELSRYRHGYLAVDASVANLKVMGTYPIDKPD 299 Query: 291 AILNVIAQTLPVKIQSITRYWINISP 316 L ++ LP++ + + +W+ + P Sbjct: 300 HTLTMLENALPIRTRRVLPWWVTLEP 325 >UniRef50_A9C156 Anti-FecI sigma factor, FecR n=3 Tax=Comamonadaceae RepID=A9C156_DELAS Length = 327 Score = 299 bits (767), Expect = 7e-80, Method: Composition-based stats. Identities = 114/317 (35%), Positives = 168/317 (52%), Gaps = 6/317 (1%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + + + L A+ W A S ++A +W Q ++ WQ E L+ + V Sbjct: 10 SMQAADARILDEAARWLARRHASDFSAAEQAELARWRSQSSRHEQIWQCAEQLKGRFNTV 69 Query: 64 PGDVASRALHDTRLT--RRHVMKGLLLLLGA-GGGWQLWQSETGEGLRADYRTAKGTVSR 120 PG V L+ R + RR +++ +L L GW W+ + ADYRTAKG Sbjct: 70 PGAVGMATLNRARPSAARRQLLRSAVLALATPALGWLAWRHLPWQDWTADYRTAKGERRA 129 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQLT 178 L DGS + LN SA VR D R +R GEI + TA +PF V T GQ+ Sbjct: 130 VTLADGSRVQLNMASAISVRMDGTARRIRQHAGEILVETAHAPPYASQPFMVQTDDGQMQ 189 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 ALGT F VR+ ++ T L V + AV V A A A+ +V+AGE L F A +P+ Sbjct: 190 ALGTRFIVRKLEHGTALAVLEGAVRVTPA-ASAKAVVVHAGEQLHFDGHGASATRPVAAR 248 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 ++WT +L + L + +A L+RYR G+++CD VA LR+SGT+ L++TD IL ++AQ Sbjct: 249 DSAWTLGVLYAENLRLQDFLAELSRYREGLVQCDDDVADLRVSGTYQLQDTDRILALLAQ 308 Query: 299 TLPVKIQSITRYWINIS 315 TLPV++ +RYW+ + Sbjct: 309 TLPVRVHERSRYWVTVE 325 >UniRef50_A6SXC7 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXC7_JANMA Length = 330 Score = 299 bits (767), Expect = 8e-80, Method: Composition-based stats. Identities = 113/312 (36%), Positives = 163/312 (52%), Gaps = 9/312 (2%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG--GVPGDVASR 70 L A+ W+AVL VS ++ +W W + ++++ AWQ+VE + N L + A+ Sbjct: 16 LEQAAEWFAVLRSGAVSDEERQQWHAWLDLREEHRLAWQRVEAISNGLALPKAAPEAANA 75 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSET-----GEGLRADYRTAKGTVSRQQLED 125 AL L RR +K L L G + L ADYR+A G + L D Sbjct: 76 ALSAAVLQRRRSLKMLSLFAVTGLAGWGVSRNSAVQTVLADLNADYRSAVGEIRNLTLAD 135 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTALGTE 183 GS + LNT S+ D +DA R ++L GE+ I T D + RPF V + +G L ALGT Sbjct: 136 GSEIWLNTNSSLDQDYDAQIRRIKLRKGEVLIATHPDTQSPARPFIVYSAEGSLRALGTR 195 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F VRQ D T+L V + VEV AP +RI+ +G+ + F+ SE AV D +W+ Sbjct: 196 FNVRQLDGKTRLSVLEGRVEVAPLDAPGARRIIESGQQVDFNRSEVLAVAAADPTQQAWS 255 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + +L + PL I L RYR+G L CDPAVA LR+ G FPL D L ++ +LPV+ Sbjct: 256 QGLLVADNMPLASFIEELARYRSGYLACDPAVADLRVVGGFPLNQPDQALAMLEASLPVR 315 Query: 304 IQSITRYWINIS 315 + +W+ + Sbjct: 316 VHQTLPWWVTVR 327 >UniRef50_C6XBX8 Anti-FecI sigma factor, FecR n=2 Tax=Betaproteobacteria RepID=C6XBX8_METSD Length = 348 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 114/316 (36%), Positives = 163/316 (51%), Gaps = 13/316 (4%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 A+ W +L S RWQQW + D++ AWQ +E + +L + A Sbjct: 32 SEAVANQAAEWLTLLMSGEASEDDRQRWQQWRMEHADHERAWQHIETIIGRLKIMEPHAA 91 Query: 69 SRALHD-------TRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSR 120 + L RR + LL AG G ++ + + ADY + GT Sbjct: 92 YKTLSPYTRREGLHSPDRRKAIVMLLWAGAAGASGLLASRTPAWQQMVADYHSDTGTQRT 151 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK-DALQRPFRVLTRQGQLTA 179 L+DG+++TLNT SA +V F QR VRL GE+ ITT + RPF V T +G++ A Sbjct: 152 ITLDDGTVITLNTASAINVHFSHQQRLVRLVAGEVLITTGHATSDARPFLVETAEGRIRA 211 Query: 180 LGTEFTVRQQDNFT-QLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 LGT F VRQQ + + ++ V + AVE+ L AP + AG+S F+ + D + Sbjct: 212 LGTRFAVRQQPDGSSRVAVLESAVEITLEQAP--SHRLPAGQSATFTRNSLIINSLQDSD 269 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 T+WTK + LG+ L+RYR G++RC+PAVA LR SG FPL++TD IL + Sbjct: 270 -TAWTKGQIIADQMRLGDFATELSRYRPGLIRCNPAVADLRFSGVFPLEDTDRILATLPS 328 Query: 299 TLPVKIQSITRYWINI 314 LPV+I TRYW+ I Sbjct: 329 VLPVRILLRTRYWVTI 344 >UniRef50_A6T0J4 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0J4_JANMA Length = 327 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 117/317 (36%), Positives = 167/317 (52%), Gaps = 9/317 (2%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + ++ + A++W L + + A ++W EQ ++Q AW L G V Sbjct: 12 PASGIDKRIVMDAANWLVKLHSQEMDASDHASLKRWCEQSTEHQRAWHAANELARNFGAV 71 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 P + L R R + ++ A W W + Y+TA G S L Sbjct: 72 PAGLGLTTLGRQRNRRAAMKTLAIVCTLAPTSWLAWTHMARDN----YQTATGERSTYTL 127 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTALG 181 DGS L LNT S+ D+ FD QR +RL GE+ + TAKD RPF V T QG + ALG Sbjct: 128 ADGSSLMLNTGSSVDIVFDDKQRLLRLRAGEVLVQTAKDSAPNPRPFIVQTGQGSVRALG 187 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE--S 239 T F VRQ+++ T++ V +HAVEV A A I+ AG F ++ A+ PL + + Sbjct: 188 TRFIVRQREDATEVAVLEHAVEVR-ALGVADPVIIAAGYGGSFGKTDIAALTPLANNVNA 246 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 ++WT+ IL + L + +A L RYR G+LRCDPAVA LR+SG F NT+ LNV+ +T Sbjct: 247 SAWTQGILIADRQRLEDFLAELGRYRPGILRCDPAVADLRISGVFQTSNTEQALNVLQET 306 Query: 300 LPVKIQSITRYWINISP 316 LPV + S TRYW+ + P Sbjct: 307 LPVTVLSRTRYWVTVLP 323 >UniRef50_Q82SB2 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82SB2_NITEU Length = 338 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 109/319 (34%), Positives = 157/319 (49%), Gaps = 5/319 (1%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 L+ A W + + + RWQ W D + AW QV+ QL Sbjct: 16 EPDAAPAVAVLQQALQWQVIFWSGEATDRDRMRWQSWLAADPAHARAWAQVQRTDEQLQT 75 Query: 63 VPGDVA---SRALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTV 118 + A A RR V+ LL GAG G L Q+ + + AD T G Sbjct: 76 LASPAAEVLRSADARRCKARRTVLGMAGLLAGAGIMGCGLRQTAQWQMMMADDHTGYGER 135 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +L DG+ +TL + +A DV + A R + L GEI I TA D+ RPF V T +G + Sbjct: 136 RNIELADGTQVTLGSATAIDVCYSAQARQLLLRTGEIFIVTAPDSADRPFLVQTTRGSVQ 195 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLAS-APAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT F VR+ Q+ VQ AV + A P ++AG+ F ++ A + L Sbjct: 196 ALGTRFNVRESGEQIQVAVQDGAVAIRPAGMNPGDVVRLDAGQQTCFDHTKVEAAEALQI 255 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +T+WT+ +L L + + L RYR+GVLRCDPAV L +SG + L +TD L ++A Sbjct: 256 SATAWTRGLLVAERMRLEDFLVELGRYRSGVLRCDPAVRDLIVSGVYSLDDTDQSLRLLA 315 Query: 298 QTLPVKIQSITRYWINISP 316 Q LPV++Q++TR+W + P Sbjct: 316 QALPVQVQTVTRWWTIVGP 334 >UniRef50_D0S2I9 Transmembrane sensor n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S2I9_ACICA Length = 318 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 94/320 (29%), Positives = 162/320 (50%), Gaps = 11/320 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + T L +A+ W +L ++ Q+ +++QW + +++Q A QQ+E + L Sbjct: 1 MSDI-TKIPHHVLDAAADWLVLLHSGEMTALQQQQFEQWKAEKKEHQLALQQMEKFSHGL 59 Query: 61 GGVPGDVASRALHDTR-----LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 + G+ S AL + +R+++ L L G E ++DY T Sbjct: 60 TNLAGNFPSEALVQSNQKFNLAAKRNMLLSLSGLAIVGLSVYF---IPWEKWQSDYHTKV 116 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G + + L+DGS L + + D+ F R ++L GEI I TAKDA RPF V T+ G Sbjct: 117 GEIKKVSLKDGSQLIMASNCYIDINFTQETRQIKLIDGEIYIETAKDAQHRPFIVETKNG 176 Query: 176 QLTALGTEFTVRQQ-DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 + ALGT+F+VRQ+ T++ V +HAV + ++ ++ I+ G+ F P Sbjct: 177 SVEALGTQFSVRQESSEQTKVKVYKHAVAIEPENSSKRQ-ILKQGQRAFFDEKYISKSLP 235 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 LD++ WT+ +L PL +V+ L RY+ G DP + +++SG F LKN + L Sbjct: 236 LDNDQPYWTQQLLVVDQWPLQKVLDELFRYKKGTYSIDPELKDIKISGVFSLKNPEQSLE 295 Query: 295 VIAQTLPVKIQSITRYWINI 314 +A + +++ + Y +NI Sbjct: 296 TLAYSHQLELTYYSPYLLNI 315 >UniRef50_B0KJM3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KJM3_PSEPG Length = 327 Score = 296 bits (760), Expect = 4e-79, Method: Composition-based stats. Identities = 115/316 (36%), Positives = 168/316 (53%), Gaps = 6/316 (1%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + + L A+ W LS V+ Q A W W AWQ+ E L +L G+P Sbjct: 9 PADTEVLEEAAEWLMTLSAGDVTEAQRADWLAWRSSSPARAQAWQRAERLMGKLEGLPPA 68 Query: 67 VASRALHDTRLTRRHVM--KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 ++ AL R M + LLL GW W+ G ADYR++ G + L Sbjct: 69 LSMSALDRPADPGRRAMISRVALLLAVLPAGWASWRLTDQHGWAADYRSSVGECRQLTLA 128 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQRPFRVLTRQGQLTALGT 182 DG+ + LNT SA D+RFD ++R ++L GEI + TA D RP RV TR+G++ ALGT Sbjct: 129 DGTQVYLNTDSAIDIRFDGNERFIQLRRGEILVQTAPDIVVPARPLRVGTREGRMQALGT 188 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKR-IVNAGESLQFSASEFGAVKPLDDESTS 241 F+VR++D T L V + AV + A A +V AGE + F+A G P+D +T+ Sbjct: 189 RFSVRERDGRTWLAVVEGAVRIEPAGGGANAGAVVQAGERVDFNAHRVGRPMPVDLTATA 248 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 WT+ +L L E +A L RY+ G +RCDP +AGLR+SG FP+ +T L+++ T Sbjct: 249 WTQGMLLADSMRLDEFVAELARYQRGFIRCDPRIAGLRISGAFPVSDTRRSLSMLESTYA 308 Query: 302 VKIQ-SITRYWINISP 316 +++ + YW +SP Sbjct: 309 LQVSAHMNGYWTLLSP 324 >UniRef50_A9BW97 Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BW97_DELAS Length = 327 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 110/313 (35%), Positives = 171/313 (54%), Gaps = 2/313 (0%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP- 64 + + R A W+ L+ + +Q Q+W +++ AWQ++E++ +Q+ G+P Sbjct: 9 SPISAEVARQAVQWWLQLNSGKAQARQHDGLQRWRAASPEHEAAWQRIESMGSQMAGIPM 68 Query: 65 -GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 A+ A + RR V +LL+ G + +S+ G AD A G L Sbjct: 69 PLARAALAAPGSAGRRRAVQALAVLLVSGAGSAAVVRSQAWRGWTADQVAAVGEQRTLPL 128 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DG + LNT SA ++R+ A +R + L GEI + TA D+L RPF V T G + ALGT Sbjct: 129 PDGGSVVLNTGSALNLRYGAAERVLELVRGEILVQTAPDSLHRPFIVQTAMGAVQALGTR 188 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 FTVRQ+++ ++ V Q AV++ A AP + + AGE F+A + LD +++W Sbjct: 189 FTVRQRESAVEVGVLQGAVQLRPAHAPHAPQRIAAGEQGTFTAQQAVHSGALDTAASAWA 248 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + +L S L + + L RYR G L CDPAVAGL +SG +PL +TD +L + +LPV+ Sbjct: 249 EGMLVASRMRLEDFLVELGRYRRGRLGCDPAVAGLHVSGAYPLADTDRVLAALTSSLPVE 308 Query: 304 IQSITRYWINISP 316 I S +RYW+ + P Sbjct: 309 IHSFSRYWVMVRP 321 >UniRef50_B0KMC8 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas RepID=B0KMC8_PSEPG Length = 318 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 116/313 (37%), Positives = 170/313 (54%), Gaps = 4/313 (1%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 T + ASHW + + Q+ R+ +W D ++ AWQ++E+L++ L GV Sbjct: 7 TPIAAAIVEQASHWLMLQWSGELDKAQQRRFAEWRNADPEHARAWQRLEHLQHTLSGVSA 66 Query: 66 DVASRALH-DTRLTRRHVMKGLLLLLGAGGGWQLWQSE-TGEGLRADYRTAKGTVSRQQL 123 D A L RR +K L LL AGG + QS+ AD R+ G ++ L Sbjct: 67 DTALAVLREQPDARRRQTLKLLSALLLAGGSGYIVQSQLPWREAMADLRSGTGERLQRTL 126 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS L LN+ SA D++F A +R +RL GE+ + + D QRP V T G + ALGT Sbjct: 127 ADGSRLGLNSGSAVDIQFSASERRIRLLAGELLLDSGHDPAQRPLIVDTIAGDVLALGTR 186 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F+V Q D+ Q+D+ + +E+ A+ + AG+ FS ++ G + P + + +W Sbjct: 187 FSVYQHDDKCQVDLFEGELELRPRQ--ARAIRLQAGQGCWFSTTQIGDIAPANLNAIAWH 244 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L PLG+ A L R+R G+LRCDPAVA L L+G FPL +TD +L + Q+LPVK Sbjct: 245 DGRLIAERMPLGQFTAELARHRAGMLRCDPAVAALPLTGVFPLADTDRVLTALEQSLPVK 304 Query: 304 IQSITRYWINISP 316 + +TRYW ISP Sbjct: 305 VHRLTRYWTTISP 317 >UniRef50_A6SX53 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SX53_JANMA Length = 330 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 110/318 (34%), Positives = 161/318 (50%), Gaps = 10/318 (3%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 + ++ A W L SP E + W D ++ AWQ++ L Sbjct: 10 EEIDASIVKQAIVWLVTLQSGGASPTDERACEAWRAADSRHEQAWQRLHGLGQDFRASSN 69 Query: 66 DVASRALHDT-----RLTRRHVMKGLLLLLGAGGGWQLWQSET-GEGLRADYRTAKGTVS 119 +AS L R RR V+K L L GG + + + + A+++TA G Sbjct: 70 VLASPLLRSVLRNSERNNRRIVLKSLFGLALIGGTATVVRKQPAWQSAMAEHQTATGEQR 129 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 R L DG+ + LNT +A DV FD R V L GEI I TA+D RPF + T G + Sbjct: 130 RIVLADGTRILLNTATAIDVHFDDQLRLVILHRGEILIETAQDEAGRPFELATSNGTIRP 189 Query: 180 LGTEFTVRQ--QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 +GT FTVR + + T + V + AV V +NAGE F+ A LDD Sbjct: 190 IGTRFTVRHSDRPSSTAVAVLEGAVRVTPGQ--GNSVRINAGEQTHFTELAALAPFALDD 247 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +WT +L L + + L RYR GVLRCDPAVA L +SG+FPL++ DA+L ++A Sbjct: 248 SAAAWTDGVLVVERMRLADFVTELDRYRPGVLRCDPAVADLLVSGSFPLRDPDAVLALLA 307 Query: 298 QTLPVKIQSITRYWINIS 315 +TLP++++++TRYW ++ Sbjct: 308 ETLPLQVRTLTRYWATVT 325 >UniRef50_B0KG70 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonadaceae RepID=B0KG70_PSEPG Length = 311 Score = 293 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 1/305 (0%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L +A+ WY L+ S + W+QW + + AW +VE L+ Q +P A +L Sbjct: 6 LEAAATWYVQLNDGANSEARTQAWRQWLQASPQHAAAWARVEKLQQQWAMLPPQAALSSL 65 Query: 73 HDTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTL 131 + RR V+K L LLL G G W + L A RT S QL DGS L L Sbjct: 66 GAAQAQRREVLKVLSLLLAMGAGGWLAAEQVPYRSLLAQQRTGSRERSTLQLVDGSQLEL 125 Query: 132 NTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDN 191 N +A DVR+DA R ++L+ GEI + D QRPF V T G + A TEF++R+ Sbjct: 126 NVGTALDVRYDAKVRAIQLYQGEILVRPVSDLQQRPFIVHTDDGSVLARSTEFSIRKLAR 185 Query: 192 FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSD 251 T++ V Q +VEV + + AG+ + F +F + L +ST+W + +LS +D Sbjct: 186 QTRVGVLQGSVEVRPQRHLDRLLQLQAGQQVSFDQDDFATAQALPADSTAWLQGMLSVND 245 Query: 252 KPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYW 311 LG+ I L RYR GVLRC A+ + +SG F + +TD L + +TLPV++ ++RYW Sbjct: 246 WRLGDFIEELGRYRPGVLRCASAIRAMSISGAFRIDDTDIALANLPKTLPVRVHYLSRYW 305 Query: 312 INISP 316 +++ P Sbjct: 306 VSVEP 310 >UniRef50_B8ECR9 Anti-FecI sigma factor, FecR n=3 Tax=Shewanella baltica RepID=B8ECR9_SHEB2 Length = 329 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 106/311 (34%), Positives = 159/311 (51%), Gaps = 6/311 (1%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 A+ +A+ W A L + + Q QQW +Q ++ AWQ++ + + +P + Sbjct: 18 DAIEAAAGWMARLLADDATEQDSINCQQWRDQSSLHEQAWQRMCQITGKFASLPKGTGIQ 77 Query: 71 ALHDTR---LTRRHVMKGLLLL-LGAGGGWQLW-QSETGEGLRADYRTAKGTVSRQQLED 125 L ++RR + L L +G W Q+ G L+A YRT LED Sbjct: 78 VLEKVSQSVVSRRRFLNVLALAGIGVTATWLGASQTRLGRSLQAQYRTGANETRTFTLED 137 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 G+ LTLN +A DV F A +R ++L GEI I T ++ +R F V T GQLTALGTEF Sbjct: 138 GTRLTLNIDTAVDVDFSAEKRQIQLHQGEILIKTGHESPRRQFLVTTHFGQLTALGTEFC 197 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VRQ +++ ++ V + AVE AS + V+AG+ +F + KPL + + SW Sbjct: 198 VRQYEHYARVAVTEGAVEAYAASGVKPQ-RVDAGQQTRFDKTMIAPPKPLQNAAISWRHG 256 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 L + + I + RYR G D AVA L +SG F L++TD L +A +L V++Q Sbjct: 257 KLVAEGMRVADFIEEIGRYRPGFTLYDSAVANLTISGVFSLQDTDLALQSLASSLSVELQ 316 Query: 306 SITRYWINISP 316 T YW+ + P Sbjct: 317 YRTAYWVKVIP 327 >UniRef50_C6DJA8 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacterium RepID=C6DJA8_PECCP Length = 329 Score = 292 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 106/314 (33%), Positives = 166/314 (52%), Gaps = 7/314 (2%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + + R A W L + V+ Q WQ+W E DN+ AWQ +E++ L + Sbjct: 14 PIQPDSAREAVAWLTQLMSDSVTEQDRREWQRWREASSDNEQAWQHIESVCANLSQLNAR 73 Query: 67 VASRALHDTR-LTRRHVMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 A ++L + RR V+K L +L L G G +++ + L ADY+T G L+ Sbjct: 74 AAHQSLSTLNGMQRRSVLKALAILCLTGGAGVAGSRTDLWQSLTADYQTQVGEQQHAVLD 133 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ----RPFRVLTRQGQLTAL 180 DG+ L LNTQ+A +V + R + L GE+ I T + RPF V T QG++ AL Sbjct: 134 DGTTLLLNTQTALNVAYGDDLRHLMLIRGEVMIETGQAEKAALYPRPFIVTTAQGKVQAL 193 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F++R QD T++ V AV++ ++V +G++ F+ G ++ E Sbjct: 194 GTRFSLRVQDEHTRVTVYDGAVKLHPQQNGQDVQVVKSGQTATFTTQRCGQIETAKAEP- 252 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +W K L ++ L + + L+RYR+GV+RC P V LR SG FPL +TD IL + + L Sbjct: 253 AWVKGQLLADNQRLVDFVDELSRYRSGVIRCQPEVESLRFSGVFPLSDTDNILAALVEAL 312 Query: 301 PVKIQSITRYWINI 314 PV+++ +RYW+ I Sbjct: 313 PVQVRYFSRYWVQI 326 >UniRef50_B4WXE6 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alcanivorax sp. DG881 RepID=B4WXE6_9GAMM Length = 326 Score = 291 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 114/327 (34%), Positives = 162/327 (49%), Gaps = 15/327 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN Q L A+ W+A+L + + RWQQW Q D+ WQ VE++ Q Sbjct: 1 MNGTAH-IDHQILSDAADWFALLRSGQACESDKLRWQQWLRQHPDHLRGWQMVEHIEQQF 59 Query: 61 GGVPG------DVASRALHDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGE----GLRA 109 + + R+ RR V+ GL L +G GG GW W+ G A Sbjct: 60 STASANHPAHTEATLKQARHNRIQRRSVITGLALAIGTGGLGWMSWRHSPLPTLVAGWNA 119 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 YRT G + +L DGS L LNT SA + D QR +++ GE+ I T K A RP Sbjct: 120 QYRTGTGEIRALELADGSRLWLNTNSAINTVLDGPQRHIQVIQGEVLIETGK-ADPRPLV 178 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V T QGQL LGT FTV ++ + T L V AVE+ + QK +++ + +FSA+ Sbjct: 179 VFTPQGQLQPLGTRFTVCRETDTTFLAVYDGAVEIT--NQARQKSVLHPQQQTRFSANAL 236 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 + P D +W K IL D LG+++ L RY++G + PAVA LR+ G FPL + Sbjct: 237 QPIHPADPARETWHKGILVADDIRLGDLVDELGRYQHGYINLSPAVADLRVFGGFPLTDP 296 Query: 290 DAILNVIAQTLPVKIQSITRYWINISP 316 L+++A LP+++ W NI P Sbjct: 297 QQALDMLASALPIRVTRPLPGWTNIHP 323 >UniRef50_B7VAW3 Probable transmembrane sensor n=7 Tax=Pseudomonas aeruginosa RepID=B7VAW3_PSEA8 Length = 316 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 114/319 (35%), Positives = 156/319 (48%), Gaps = 7/319 (2%) Query: 1 MNPLLT-DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 MN L A+ W L + QW ++ + AW++ E L Sbjct: 1 MNAADEGRIPSPILDEAAEWLVRLQDSGCTDDTRQACAQWRQRSPQHAHAWERAERLLQC 60 Query: 60 LGGVPGDVASRALHDTRL--TRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 LG +P +A L R RR + L+L GA G WQ+E AD RT G Sbjct: 61 LGRLPPALALPTLGRERGLDRRRAIKHLALVLGGASLGLATWQAEPLRDWLADQRTGVGE 120 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 R L DGSLLTLNT SA D+ FDA QR VRL GEI + + D RPFRV T + +L Sbjct: 121 QRRLTLPDGSLLTLNTDSAVDLAFDASQRLVRLLRGEIFVDSRADP--RPFRVATAEARL 178 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 A F VRQ+ T++ V VE+ + + +GES++ A D Sbjct: 179 HAGAARFNVRQEMAATRVAVLAGRVELSPLHGRGRW--LESGESVRLGADGEARRLAFDG 236 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +WT+ +L PL EV+A L RYR GVLRCDP +A L +SG +PL + L ++ Sbjct: 237 LPDAWTRGMLMADRMPLAEVLAELARYRRGVLRCDPQLARLAVSGAYPLLDLRRTLGMLQ 296 Query: 298 QTLPVKIQSITRYWINISP 316 T P+K++ +T YWI++ P Sbjct: 297 ATYPLKVRGVTDYWISLVP 315 >UniRef50_A6SZL9 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZL9_JANMA Length = 340 Score = 290 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 9/312 (2%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 + A+ WYA L + A +++W +QD + A+ ++E L + V A Sbjct: 27 ADVIARAAEWYAQLHSGDSGAAELAEFERWRQQDPGHAEAYARMEKLWARFDTVSSKPAV 86 Query: 70 RALHDT-----RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 AL+ ++ + LLL + W QS G+ + ADYRTA G +L Sbjct: 87 LALNKALKSGAGKRKKLTAQVLLLCIAVFAAWFASQSMFGKYMLADYRTAIGEQRVIELS 146 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 D S +TLNTQSA D+ F QR V L GEI I AKD+ RPF V T G ALGT++ Sbjct: 147 DQSRITLNTQSAIDIDFSGRQRRVTLQRGEIMIDVAKDST-RPFIVETAHGTARALGTQY 205 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-ESTSWT 243 V+++ + T++ V + +V+ A+ + GE + V ++ + +W+ Sbjct: 206 IVKREADATRVTVLESSVQ-ACAAKVEACVTLTPGEQTTITPDAVQPVSVVNAQAAAAWS 264 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDP-AVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 K +L D+PL +V+ L RYR G + + +AGLR+SG + L +TD L V+ T P+ Sbjct: 265 KHMLVVDDQPLAQVLTELARYRYGRIVFNADEIAGLRVSGVYALDDTDRTLEVLLATTPI 324 Query: 303 KIQSITRYWINI 314 +I+ T I + Sbjct: 325 RIKRYTPLLIVV 336 >UniRef50_Q02NL2 Possible Fe2+-dicitrate sensor n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02NL2_PSEAB Length = 316 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 112/318 (35%), Positives = 169/318 (53%), Gaps = 3/318 (0%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M L + + L +A+ WY E + + W++W E D ++ AW+++E L+ Q Sbjct: 1 MQGLTMELEIEVLEAAATWYVRFGAEPPNDGERQAWREWLEADPRHRRAWERIERLQGQW 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGA-GGGWQLWQSETGEGLRADYRTAKGTVS 119 +P + + L R RR ++K L LL A G GW L A RT G Sbjct: 61 AALPAETSLHTLAGVRARRRALLKTLALLACAAGSGWLASGGLPYRALLAGERTGVGERR 120 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 + +L DG+ + L++ +A D+ +D R LW GEI + +A RPF V T QG + A Sbjct: 121 QLRLADGTRVDLSSATALDLAYDESLRQAYLWRGEILVESA--QSARPFLVHTAQGSVRA 178 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F+VR + T++ V HAVE+ P + + AG+ F + PL + Sbjct: 179 LGTRFSVRCEGPRTRVCVLSHAVELRPLQTPTRPMRLPAGQQALFDERRGYSSTPLREGE 238 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 SWT+ +L+ D PLGE IA L+RYR GVLRC VA LRLSG + L DA+L + ++ Sbjct: 239 GSWTQGVLTVVDWPLGEFIAELSRYRTGVLRCAAEVAELRLSGAYRLDRIDAVLQNLGKS 298 Query: 300 LPVKIQSITRYWINISPL 317 LPV+++ +TRYW+ + + Sbjct: 299 LPVRVRYLTRYWVTVESV 316 >UniRef50_C1DJ04 Anti-sigma factor, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJ04_AZOVD Length = 313 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 100/310 (32%), Positives = 146/310 (47%), Gaps = 3/310 (0%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + + A W L WQ+W D +++ AWQ++E++ +L G+P Sbjct: 4 PVSERVAQEAVRWLVELQD-DADELLRRDWQRWRAADPEHERAWQRIESVNRRLRGLPPA 62 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 A A+ L R + G+L L ADYRTA G L DG Sbjct: 63 AARAAVEGAPLHGRRQVLGMLGLAAVAVPGLWLAGGRARPWLADYRTAVGERRDIGLADG 122 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 S L+LNT SA ++R + R + L GEI + A F + T QG L F + Sbjct: 123 SRLSLNTDSAVNLRLASDSRWLELLRGEIQLEVAPGTAS--FHIATAQGSLLVEQARFNL 180 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 RQ + +L V V V A P + + AG+ ++F + GA +PLD +W + Sbjct: 181 RQYADHCRLGVLDGTVRVRCAGHPDLQASLAAGQQIRFDSQRLGAPQPLDAAVAAWRDGM 240 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 L D L + + L RY G L CDP VA L LSGT+PL+++ AIL ++ LPV+I Sbjct: 241 LVARDMRLADFLDELGRYHRGWLGCDPRVANLHLSGTYPLRDSLAILAMLEVALPVRISQ 300 Query: 307 ITRYWINISP 316 TR+WI++ P Sbjct: 301 RTRWWISVQP 310 >UniRef50_Q88IB4 Transmembrane sensor, putative n=3 Tax=Pseudomonas RepID=Q88IB4_PSEPK Length = 321 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 110/312 (35%), Positives = 150/312 (48%), Gaps = 9/312 (2%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRA 71 L A+ W L + Q W ++ + AWQ+ E + +P V Sbjct: 10 ILGEAADWLVQLQSGTATEADHRAVQAWCKRSAQHAQAWQRAEAILGDFRRLPTPVTGET 69 Query: 72 LHDTRL----TRRHVM-KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 L +RR + + L LL A W W+ + AD TA G L DG Sbjct: 70 LRRLSRNGAVSRRQALHRLGLWLLAAPAAWLAWRETPWQQWTADAHTAVGEQRTLTLADG 129 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALGTEF 184 S + LNT +A D+ FDA QR + L GEI +T+AKD RP V T GQ TA GT F Sbjct: 130 SQVLLNTDTAIDITFDARQRRIDLLAGEILLTSAKDPATPARPLSVRTPHGQATARGTRF 189 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTK 244 +VR TQ+ V + AV+ A ++ AGE F PL+ +W Sbjct: 190 SVRIHGPLTQVAVLEGAVDTRPLHAD--SLLLKAGERSAFDGDRVLPASPLETGDLAWEH 247 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 +L D L +++ L RYR GVLRC PAV L++SG FPL +TDA L +++ TLPV I Sbjct: 248 GMLLARDMRLADLLQELARYRPGVLRCHPAVRELKVSGAFPLADTDASLRLLSDTLPVNI 307 Query: 305 QSITRYWINISP 316 Q +TRYW+ + P Sbjct: 308 QGMTRYWVTVEP 319 >UniRef50_A1BCE6 Putative FecR n=2 Tax=Proteobacteria RepID=A1BCE6_PARDP Length = 318 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 153/318 (48%), Gaps = 7/318 (2%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + R + L A+ W + A +++W Q + AWQ+ + + V Sbjct: 1 MSGPPRAELLEEAADWAMAMRYGAPGEVDGAAFERWLAQSPQHAAAWQRAQAVFQTFERV 60 Query: 64 PGDVASRALHD--TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 P + L RR + L L + + + AD TA G Sbjct: 61 PRGLGKDVLRAMEPLPGRRRALGVLGGALLVPSAGVMAWQQPWQKWGADVATAVGERRAL 120 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTA 179 L D S L LNT SAAD+ F +R + L GEI +TT D RP V T G++ A Sbjct: 121 ALPDASQLVLNTDSAADIAFTTAERRIHLRAGEILLTTHPDPAPVPRPLLVETAFGEVRA 180 Query: 180 LGTEFTVRQQDNF-TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 LGT F+VRQ D ++ V +HAVE+ + A +++ GE F ++ +D+ Sbjct: 181 LGTRFSVRQLDGDLVRVSVFRHAVEIRPRN--AAPHVLHQGEQADFDSNGVRPPATVDES 238 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 + W + +L D LG+VIA + R+R GVLRCDPAVA + +SG L +TD L ++ + Sbjct: 239 AAIWEQGMLLAQDMRLGDVIAEMARHRRGVLRCDPAVAAILVSGAISLSDTDGGLALLER 298 Query: 299 TLPVKIQSITRYWINISP 316 TLPV+IQ T +W+ ++P Sbjct: 299 TLPVRIQRRTPWWVVVAP 316 >UniRef50_A6SXA7 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXA7_JANMA Length = 333 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 112/316 (35%), Positives = 159/316 (50%), Gaps = 14/316 (4%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV----- 67 L+ A+ W+A+L + +S WQ+W + +++ AW +VE + Q + Sbjct: 15 LQQAAKWFALLRSDSISDSDRISWQKWLSANAEHRRAWARVEAVSQQFETFTPEPEQSAA 74 Query: 68 --ASRALHDTRLTRRHVMKGLLLLLGAGGG-WQLWQSET----GEGLRADYRTAKGTVSR 120 A A R RR +K L LL G W + Q E +DY TA G Sbjct: 75 VNALDAASRARKQRRRALKMLTLLCTTGAVSWSVGQLEPVQRSWLAFSSDYSTAVGETRD 134 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLT 178 L DGS + LNT SA + R+ A R + L GEI I TAKD RPF V T QG+L Sbjct: 135 VMLADGSQVWLNTASALNARYQADLRRLVLLGGEILIETAKDPAVPTRPFVVDTAQGRLR 194 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 ALGT FTVRQ D TQL V + AVE+ +A +I++AG+ + FSA +D Sbjct: 195 ALGTRFTVRQLDGITQLSVYKGAVEITPVAASGSAQIIDAGQQVLFSADGIEIPSAVDPA 254 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 + +W K +L D L E + L+RY G L C P VAGLR+ G +PL + ++ Sbjct: 255 NEAWAKGVLFADDLTLAEFVVELSRYHKGYLACAPEVAGLRVVGAYPLHDMQQTFAMLET 314 Query: 299 TLPVKIQSITRYWINI 314 LPV +++ +W++I Sbjct: 315 ALPVTVKATFPWWVSI 330 >UniRef50_B0KPG4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KPG4_PSEPG Length = 313 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 122/318 (38%), Positives = 170/318 (53%), Gaps = 12/318 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M Q R A++W+ ++ + VSP Q A +W +++ AWQ+ ++ QL Sbjct: 1 MPNQQPRITAQVARQAANWHMLMLEDAVSPAQRAACNRWRSAAPEHERAWQKALRVQAQL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMK-GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 G +P +A L+ RR VMK L L + A G+ ++ + Y T G Sbjct: 61 GLLPPQLAMGTLNRE---RRQVMKQLLALAIVAPLGYVGYRQLAPQNA---YATDVGQHK 114 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD---ALQRPFRVLTRQGQ 176 + L DG+LL LNT +A DV FDAHQR + L GEI I + +D RP RV QG Sbjct: 115 QLTLADGTLLDLNTDTAVDVNFDAHQRLISLRRGEILIDSGRDSSSPQHRPLRVACEQGL 174 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 L ALGT F VRQ++ TQL V Q AV V + P Q ++AG+ + F A+ GAV P Sbjct: 175 LEALGTRFLVRQREGATQLTVFQGAVLVTPSHGPRQ--TLDAGQQVTFDAAGQGAVTPAR 232 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 ++ + W + L + PL E + L RYR G LRC VA L +SG F L+NTDAIL + Sbjct: 233 EQDSQWIRGQLLVDEMPLREFLGELGRYRPGWLRCQSDVAQLLISGAFQLENTDAILAAL 292 Query: 297 AQTLPVKIQSITRYWINI 314 TLPV++ TRYW+ + Sbjct: 293 PATLPVQVDYRTRYWVTV 310 >UniRef50_A6T3S7 Fe2+-dicitrate sensor, membrane component n=4 Tax=cellular organisms RepID=A6T3S7_JANMA Length = 330 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 102/317 (32%), Positives = 159/317 (50%), Gaps = 7/317 (2%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + L A+ W LS + ++W + ++ AW + + L N+LG +P Sbjct: 13 PEAIDPRILDEAAEWLMQLSAG-ARAEDHRACERWSQSSPEHARAWARAQLLLNKLGALP 71 Query: 65 GDVASRALHDTR--LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 +A L+ R + + +L A W +W + ADY TA G Sbjct: 72 PSLAMPTLNRAPDAGRRAALTRLAAILALAPASWGIWSVFQAQDWMADYCTAVGEQRVIH 131 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQLTAL 180 L D + LTLNT +A DVRF + QR VRL GEI + TA +A RPF V T QG++ AL Sbjct: 132 LADNTELTLNTATAVDVRFSSTQRNVRLRSGEILVQTAHEAAAVYRPFSVNTIQGRMEAL 191 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLL-ASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 GT F+VR + T L V + AV + + ++++ AG+ + F+ + V DD Sbjct: 192 GTRFSVRMDGDTTHLAVLEGAVRITPDRTGTGAQQVLRAGQQVSFTDNVIADVAGADDAV 251 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W + +L L + A L+RYR+G++R DPAVAG+R+SG +P+ +TD L ++ T Sbjct: 252 IAWARGMLVADKMRLADFAAELSRYRSGIVRVDPAVAGVRVSGAYPVGDTDKALAMLVST 311 Query: 300 LPVK-IQSITRYWINIS 315 PV + + WI + Sbjct: 312 YPVDAVTRMRGRWITLV 328 >UniRef50_C6CDZ5 Anti-FecI sigma factor, FecR n=5 Tax=Enterobacteriaceae RepID=C6CDZ5_DICDC Length = 327 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 121/326 (37%), Positives = 171/326 (52%), Gaps = 12/326 (3%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + QAL+ A+ WYA L + ARW QW ++ AWQ VE + + Sbjct: 4 QASASPPDYQALQQAADWYAQLLEADHDSELHARWLQWLSASDAHRQAWQYVETISQRFQ 63 Query: 62 GVPGDVASRA-----LHDTRLTRRHVMK-GLLLLLGAGGGWQLWQSETGEG----LRADY 111 + GDV A T LTRR+ ++ G LL G+ W W+ L ADY Sbjct: 64 PLRGDVTPLASQTLLQPSTPLTRRYTLRLGALLATGSLLSWLTWRHTPVRESLLALAADY 123 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT G + L DG+ L L+T SA DVR+ +R + L GEI + TA D L RP V Sbjct: 124 RTGTGEIRHVSLSDGTQLWLDTASALDVRYTDVRRQLHLIAGEILLDTAPDTL-RPLFVA 182 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 +R+G + ALG+ F++RQ + TQL V +V V A R ++AG +F A+ G Sbjct: 183 SREGDMQALGSRFSLRQLADSTQLTVYTGSVAVTPRQA-GPLRQIDAGRQWRFDANGAGF 241 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 P+ + W + +L SD PLG+V+A L RYR+G L C P VA LR+ GTFPL +TD Sbjct: 242 ETPMGAQDADWRQGMLHASDTPLGDVVARLARYRHGYLACAPNVAALRVVGTFPLMDTDR 301 Query: 292 ILNVIAQTLPVKIQSITRYWINISPL 317 L ++++ LPV+I +WI + P+ Sbjct: 302 ALAMLSRALPVRIHRRFDWWITVEPV 327 >UniRef50_Q39ES0 Putative FecR n=1 Tax=Burkholderia sp. 383 RepID=Q39ES0_BURS3 Length = 321 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 105/320 (32%), Positives = 155/320 (48%), Gaps = 4/320 (1%) Query: 1 MNPLLTDS-RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M+ D+ + A W A L + R W + +++ AWQ++ + + Sbjct: 1 MSGRQGDALPEAVVEQAIGWLARLWSGDATDDNRRRCAAWRAEHPEHERAWQRLAGIDAK 60 Query: 60 LGGVPGDVASRAL---HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKG 116 LG VP D A L RR + + G + + + + +DY + G Sbjct: 61 LGSVPADTARGVLLAQPARPARRRAMRALGWAITLGGASYGVRSTRLWQSATSDYASGVG 120 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 V L DG+ + L+T+SA DVRFDA +R + L G + + TA D RP RV RQG Sbjct: 121 EVRDVTLADGTRVWLDTESAIDVRFDARERRIVLVRGAVHVETAHDTAGRPLRVEMRQGM 180 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 ALGT FT + ++DV AVE+ A A + + AGE+++F A F +P D Sbjct: 181 ARALGTRFTASDEGMRARVDVFDGAVEIRPARAADRLLRLEAGEAVRFDADGFAPREPAD 240 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 +++WT+ L + A L RYR GVLRCDPA+A L +SG F L +TD L + Sbjct: 241 VRASAWTQGRLIAERMRVDAWCAELARYRPGVLRCDPALARLSVSGVFSLTDTDRALASL 300 Query: 297 AQTLPVKIQSITRYWINISP 316 LPV + TRYW+ + P Sbjct: 301 RTALPVDVVYRTRYWVTVVP 320 >UniRef50_Q82TB4 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82TB4_NITEU Length = 336 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 83/330 (25%), Positives = 139/330 (42%), Gaps = 20/330 (6%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG-- 61 + + L A+ W A L + + + W D ++ A++++E+L L Sbjct: 7 ITEELPETILEEAAIWQARLQHGETDIELQKAFNIWLAADARHRQAYEEMESLWGALETP 66 Query: 62 -------GVPGDVASRALHDTRLTRRHVMKGL----LLLLGAGGGWQLWQSETGEGLRAD 110 A++ + +L +R + +G L WQ + ++D Sbjct: 67 VTQLMAEQSDHTFAAKTVPLHKLRQRSLGRGFQCLALAACLVLAIVIGWQQDWVTRWQSD 126 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y T G + + D S +TLNT SA V F A +R VRL GE A RPF V Sbjct: 127 YMTVIGQETSFLMADNSRITLNTDSALAVDFTAERRQVRLLKGEAWFEVTS-ADNRPFIV 185 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASA----PAQKRIVNAGESLQFSA 226 T G + GT F +R + + + + VE+ ++ G+ S Sbjct: 186 ATSAGSVRVTGTRFNIRLHQDTAIVSLDEGQVELSTPDHSNNPNGSPIVLFPGQQATLSP 245 Query: 227 SEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTF 284 + P D + T+W ++ L F D PL EV+ TL R+R+G + + + L++SG F Sbjct: 246 QGISSPSPFDHTAITAWLRNQLVFYDTPLAEVVDTLNRHRHGRIFITNQKLKALKVSGVF 305 Query: 285 PLKNTDAILNVIAQTLPVKIQSITRYWINI 314 D L+V+ TLP+ + +T Y + I Sbjct: 306 STDEPDTALDVMINTLPIHLLRLTDYLVLI 335 >UniRef50_B3PJT6 Transmembrane sensor n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJT6_CELJU Length = 329 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 115/321 (35%), Positives = 170/321 (52%), Gaps = 9/321 (2%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + D + L A W L VSPQ ++ W + Q +Q AW +V+ + QLG Sbjct: 9 SANTADLSQDILHRAMEWQVTLWSGEVSPQDMRAFECWLQVSQQHQLAWHKVQQVNQQLG 68 Query: 62 GVPGDVASRALHDTRL---TRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGT 117 VP +ASR L T + RR ++ GL ++ G G+ + QS + ADYRT +G Sbjct: 69 QVPDQLASRVLRQTAVVDHRRRQLLVGLGIIGSLGALGFGVSQSPQWQMASADYRTGRGQ 128 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQ 174 L DG+ L LNT SA DV F A R + L+ GE+ I T D RP V T Sbjct: 129 RRELILPDGTQLMLNTASAMDVVFSADSRRLILYRGEVQIVTGADTGAGIARPLWVETAA 188 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G + +GT+FT+RQ ++DV + AVE+L Q + AG++ QFS + +++ Sbjct: 189 GVVRPIGTQFTLRQCGKDVKVDVAEGAVELLPKQ--GQGIRLEAGQAAQFSRQQVSSIQT 246 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 ++WT+ +L + LG+ IA L+RY G+LRCDPA A L +SG + LK+T +IL Sbjct: 247 AVATDSAWTRGLLIAEQQRLGDFIANLSRYHTGILRCDPAAADLIVSGVYLLKDTHSILR 306 Query: 295 VIAQTLPVKIQSITRYWINIS 315 + Q LPV++ + YW +S Sbjct: 307 TLEQVLPVRVDTRLGYWTTLS 327 >UniRef50_Q887T2 Regulatory protein, putative n=4 Tax=Pseudomonas RepID=Q887T2_PSESM Length = 320 Score = 282 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 106/320 (33%), Positives = 155/320 (48%), Gaps = 14/320 (4%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + + + A+ W A+L E VS +++W + D +Q A ++++L + Sbjct: 4 QREPSERMITEAASWLALLQDEPVSAADRHAFERWRKADPGHQLALSRMQSLWGSFDELS 63 Query: 65 GDVASRALHDT------RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 A AL T + T R V L+ + G E AD T G Sbjct: 64 DTPARIALRQTFAPAGSKPTSRTVQALALVGVLVCGW---MSVERLPVWMADRHTDVGER 120 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 S L DGS + LN+ SA DV+FD QR + L GE+ + AKD +QRPF V T QG +T Sbjct: 121 SEFSLADGSQVQLNSGSALDVKFDGRQRVIELLQGELWVEVAKD-VQRPFVVRTDQGTIT 179 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL-DD 237 ALGT F VR+ + T + V + A + + A V G+ L D Sbjct: 180 ALGTRFVVRRGEEGTTVSVLESA--IAAQANTADVINVATGQQALLKDGRVQTPHALGSD 237 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVI 296 + WT+ +L D+PL EV+ TL YR+G+LR D A+AGLR+SG F L +TDA L + Sbjct: 238 DPADWTRGVLKVDDQPLSEVLQTLATYRHGLLRYDTQALAGLRVSGVFRLDDTDAALATL 297 Query: 297 AQTLPVKIQSITRYWINISP 316 A LP+K++ T + + P Sbjct: 298 ADNLPIKVERFTDLLVIVKP 317 >UniRef50_A9BW91 Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BW91_DELAS Length = 336 Score = 282 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 156/325 (48%), Gaps = 14/325 (4%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + R+ A+ W+ +L S ++ W + ++ AW + + + G Sbjct: 6 SQAAAPLSREIALQAAEWFVLLHSGEASEADHRAFEAWRARADVHEQAWLRALAVSQRAG 65 Query: 62 GVPGDVASRALHDTRLT-----RRHVMKGLLLLL-GAGGGWQLWQSETGEGLRADYRTAK 115 +P + + AL + RR ++ L LL+ A GW W++ + + TA Sbjct: 66 SLPPTLGAPALARKQRRLGAVGRRDTVRALALLITAAPVGWLAWRAAPWMQWTSTHATAT 125 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTR 173 G L DGS + L+T SA DV FD R V L G + I TA D RPF V T Sbjct: 126 GERREWTLADGSRIVLDTGSAVDVLFDEALRRVHLSEGAVFIETAPDPQSRHRPFVVTTG 185 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 QG++ ALGT F VR +++ V Q AV++ AQ+ L F A G + Sbjct: 186 QGRVRALGTRFVVRSVRERSEVAVLQGAVQITTRGGAAQQLQAGQ--QLWFDAMGMGRAE 243 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN----T 289 P D + W + +LS + L + +A L+RYR+G L CDP+VA LR++G F L + T Sbjct: 244 PADAGAAQWARGLLSADNMRLADFVAELSRYRSGWLHCDPSVADLRVTGAFQLGDADTGT 303 Query: 290 DAILNVIAQTLPVKIQSITRYWINI 314 DA+L + LPV++ TRYW+ + Sbjct: 304 DAVLANLVHLLPVQVHYRTRYWVTV 328 >UniRef50_B0KIR0 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIR0_PSEPG Length = 315 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 119/316 (37%), Positives = 163/316 (51%), Gaps = 4/316 (1%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M R L +A+ WY L A ++W D +Q AW+++ L+ L Sbjct: 1 MTGA-DPLDRNTLEAAARWYVELRC-EADEATRAAHRRWLLSDPRHQQAWERLGRLQGTL 58 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLL-GAGGGWQLWQSETGEGLRADYRTAKGTVS 119 V +A L+ R RR V+K L +LL G + L AD T G Sbjct: 59 QQVAPGIARPMLNSARAKRREVLKVLSVLLMAGAAGGLALREGGVASLMADLSTGVGKRR 118 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 QL+DGS L LNT +A +VR+ A R + L GEI + T DAL RPF V TRQG + A Sbjct: 119 SLQLDDGSQLQLNTDTAVNVRYTADIRALELLKGEILVQTVPDALSRPFIVHTRQGSVRA 178 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT FTVR +++ V +HAVEV A A V AG+ L F E GA+ P + Sbjct: 179 LGTRFTVRCDSETSRVCVLEHAVEVRSARG-AAVVRVGAGQQLAFRLEEIGALTPAAAMA 237 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W +++L D L +V++ L RYR G L CD AV+ LRLSG F L + D++L + T Sbjct: 238 DAWAREMLVVDDWRLADVVSELQRYRPGYLGCDEAVSDLRLSGAFHLSDIDSVLENLTTT 297 Query: 300 LPVKIQSITRYWINIS 315 LPV+I+ +RYW + Sbjct: 298 LPVRIRRFSRYWTRVE 313 >UniRef50_UPI00016AFA6E putative FecR protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFA6E Length = 337 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 110/318 (34%), Positives = 164/318 (51%), Gaps = 16/318 (5%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 ++L A++WYA+L + S + W QW + +++ AW VE + + + G+ A+ Sbjct: 19 ESLEQAANWYALLHADGGSGEHRPAWAQWLAERPEHRRAWAHVEAVSLRFEPLRGESAAE 78 Query: 71 AL---------HDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEG----LRADYRTAKG 116 +RRHV+ L L G G GW W LR+DYRT G Sbjct: 79 RNAAAAAVHVSSTRAASRRHVLGSLAALAGTGLAGWLAWHFTPLPERIVALRSDYRTGIG 138 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 QL DG+ + LN SA DV +D +R + L GEI I TAKD RPF V T G+ Sbjct: 139 ERRDVQLADGTRVWLNANSAFDVHYDDTRRLLTLTMGEILIDTAKDRQGRPFFVDTPNGR 198 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 + ALGT FTVRQ D T L V VE+ + + IV AG+ QF+A A + D Sbjct: 199 MQALGTRFTVRQSDTHTLLAVFNGRVEIRNRAGHVE--IVPAGQQRQFTAEAILAPERAD 256 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 +W++ ++ D LG +IA L RY++G + DP+VAG+R+ G FP N +L ++ Sbjct: 257 PAREAWSRGVILADDVTLGALIAELDRYQHGHIGVDPSVAGIRVVGRFPADNPGRMLAML 316 Query: 297 AQTLPVKIQSITRYWINI 314 + LP++++ +W+ I Sbjct: 317 ERDLPIRVRRTLPWWVTI 334 >UniRef50_D0J628 Putative FecR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J628_COMTE Length = 338 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 109/333 (32%), Positives = 158/333 (47%), Gaps = 20/333 (6%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P D A R A+ W L A +W D ++ AWQ+ E + +L Sbjct: 6 PSALDIDPSAARQAAQWLVRLHAGDADKTVHAELMRWRNSDPSHEMAWQRAELVLGKLNA 65 Query: 63 VPGD-----------VASRALHDTRLTRRHVMKGLLL--LLGAGGGWQLWQSETGEGLRA 109 +++ AL + ++R + LL ++ G+ +W+ A Sbjct: 66 TRAGNSAEAGNTLGGLSAAALREANRSQRRAVARLLATAIVAGPIGYGVWRLAPWHAWSA 125 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 D RT G L DGS + L+T SA D+ F + +R + L G I + TA DA RPF Sbjct: 126 DMRTDTGESRESTLADGSRIQLDTGSAVDMAFTSSERRLILRAGAIWVQTAADAALRPFL 185 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQ------LDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 V T QG + ALGT FTVR F + + VQQ AVE+ + ++AG+ Q Sbjct: 186 VQTAQGTVRALGTRFTVRIAPPFARTEYSCLIAVQQGAVELSPVN-DDTSVRIDAGKQAQ 244 Query: 224 FSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGT 283 SA G + S WT +L PLG A L+RYR G++RCDPAVA L +SG Sbjct: 245 MSAGNVGVPEAAGLASDGWTHGVLYAEKTPLGIFAAELSRYRPGIVRCDPAVAALPVSGA 304 Query: 284 FPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 F L++TD L +A ++P++I +RYW+ I P Sbjct: 305 FQLRDTDQALAALAASMPIRILQRSRYWVTIVP 337 >UniRef50_Q4ZTA2 FecR protein n=11 Tax=Pseudomonas RepID=Q4ZTA2_PSEU2 Length = 321 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 100/317 (31%), Positives = 156/317 (49%), Gaps = 8/317 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 + P ++ R+ +R A+ W A+L S + A Q W + ++ AWQ+ + LR + Sbjct: 2 IRPAPSNEEREVVRKAAQWLALLESGGASEEDHAMLQHWRDSSASHERAWQKAQQLRQRF 61 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVS 119 G+P ++A L RR +K L + W L + E RAD +TA G Sbjct: 62 FGLPANLAMATLDRPDKARRATLKRALGAVALVPAVWLLGRQLPLEVWRADLQTAVGEHK 121 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 R L DGS L LNT SA +V A R + L GEIA+ P + G++ Sbjct: 122 RLSLADGSTLQLNTDSAVNVDMGA--RRITLVRGEIALKV---PGSAPLTIHGPYGRIVV 176 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 +E VR D+ ++ V V++ P +NA + + S G V D Sbjct: 177 GRSEVCVRLNDSDCRVSVVSGTVQLYPLRGP--VVALNAQQQVSLKQSGVGPVSAFDALL 234 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 W D+L+ ++ LG+ + L RYR G+LR +PA+ LR++G+F L NTD +L+++A + Sbjct: 235 PGWRDDVLTAQNQSLGDFLRELGRYRPGLLRWEPALENLRVTGSFRLDNTDRVLSLLAAS 294 Query: 300 LPVKIQSITRYWINISP 316 LPV +Q TRYW+ + P Sbjct: 295 LPVDVQMRTRYWVTLVP 311 >UniRef50_B0KNB6 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KNB6_PSEPG Length = 314 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 112/311 (36%), Positives = 158/311 (50%), Gaps = 1/311 (0%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 ++ Q + A W L+ ++ Q+W ++ AWQ++ +LG +P Sbjct: 4 SEPTEQVVAQAIGWRVRLASGLAQVEELEACQRWRGLHPSHEQAWQRLAVFDGRLGAMPP 63 Query: 66 DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 AS+AL R R + LLL G+ G A RTA G R QL D Sbjct: 64 PQASQALRY-RDRRTVLKGLALLLGGSAVVGSASLGMRGSPWLAGQRTAMGERRRLQLPD 122 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 G L +N+ SA D+ FD+ QR + L GE+ I T K +RPF V T G L ALGT F+ Sbjct: 123 GGWLQMNSGSALDLAFDSQQRRINLLAGEVMIQTGKQGAERPFWVETPLGTLQALGTGFS 182 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VR D L V++ AV V + ++ AGE ++F+ A +PLD ++ +W Sbjct: 183 VRLNDESALLAVEEGAVAVRPGTLLQSAAVIRAGEQVRFNRQRVFATQPLDRDALAWRDG 242 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 L PL + A L RYRNGVLRCDPAVA L +SG FPL D L + +TLPV+ + Sbjct: 243 YLVVRQWPLARLCAELGRYRNGVLRCDPAVADLLISGVFPLDEPDRALAALGRTLPVRTR 302 Query: 306 SITRYWINISP 316 +TR+W+ + P Sbjct: 303 YLTRWWVTLEP 313 >UniRef50_Q1LER3 Putative FecR n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LER3_RALME Length = 328 Score = 279 bits (714), Expect = 9e-74, Method: Composition-based stats. Identities = 105/325 (32%), Positives = 157/325 (48%), Gaps = 10/325 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ D + + +A W L S + R+ W D ++ AWQ++++LR+ Sbjct: 1 MSSSQADLPSEVIDAAIDWAIRLLFNEPSDEMRQRFLVWEGADPRHRLAWQRIQSLRDGF 60 Query: 61 GGVPGDVASRALHDT-------RLTRRHVMKGLLLLLGAGGGW-QLWQSETGEGLRADYR 112 VP +A L + + RR +K L L + G ++ AD Sbjct: 61 PRVPATLAVETLRNAETIRGRRQAGRRQAIKLLALGGVSAFGLSMAYRESPWRSWAADVH 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ-RPFRVL 171 T G R LEDG+++ LNT++A D+RFD R V L GEI +TT D RPFRV Sbjct: 121 TGVGEQRRLALEDGTVVVLNTETALDIRFDGQHRDVLLRRGEILVTTGHDGDAARPFRVQ 180 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T G + ALGT F VR + + + VQQ AV + AP+Q G + + Sbjct: 181 TPFGAMRALGTRFAVRLEADRACVSVQQGAVALHDGKAPSQAVA-TPGTTWTMTQDTSAL 239 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 SW +LS S+ L +V+A L RYR+G + CDPAVA L +SG + + +TD Sbjct: 240 SDAAALSPDSWANGLLSGSNMRLADVLAELARYRHGRIDCDPAVADLVISGAYRIDDTDR 299 Query: 292 ILNVIAQTLPVKIQSITRYWINISP 316 L + + LP+++ TRYW+ + P Sbjct: 300 TLRFLEKALPIRVSYFTRYWVRVGP 324 >UniRef50_Q88Q30 Transmembrane sensor, putative n=1 Tax=Pseudomonas putida KT2440 RepID=Q88Q30_PSEPK Length = 321 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 110/326 (33%), Positives = 162/326 (49%), Gaps = 14/326 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ D L++A+ W+A L +A+W W +D ++ AW VEN+ + Sbjct: 1 MSRAPLD--HAVLQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVENINQRF 58 Query: 61 GGVPGDVASRAL-----HDTRLTRRHVMKGLLLLLGAGG-GWQLWQS---ETGEGLRADY 111 GG+ G R +RR V+ L + AG GW WQ ++ A Y Sbjct: 59 GGLSGQAEQARQVFDSVRRDRHSRRAVLGSLCVAGVAGVLGWGGWQRGWVDSPRAWFATY 118 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT G V L DGS L LN +A DV+FD R +RL+ GEI I + KD RP V+ Sbjct: 119 RTGLGEVRPVTLADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGKDP--RPLSVV 176 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 TR G++ LGT F+VR Q T L V AV+ S ++ + AG+ + F A + GA Sbjct: 177 TRAGRVQPLGTRFSVRDQGLQTTLSVFAGAVQATC-SGSGRQTTLQAGQMMVFDAQQVGA 235 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 W++ +L D PL ++I L YR+G L DPA+ LR GTFPL +TD Sbjct: 236 PSTAQRLREDWSRGVLVAEDMPLVQMIDILRDYRHGHLGIDPAIGSLRAVGTFPLLDTDR 295 Query: 292 ILNVIAQTLPVKIQSITRYWINISPL 317 L ++ + LP+++ +W++I + Sbjct: 296 ALAMLERALPIRVVRTLPWWVSIEAV 321 >UniRef50_B7X231 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X231_COMTE Length = 326 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 10/325 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + + ++ A W L G S + W E ++ AW++++ ++++ Sbjct: 1 MSAAPNEPSPEVVQKAIAWLVRLQGGSASAAVWDECRLWREAAPEHALAWERLQGIQSRF 60 Query: 61 GGVPGDVASRALH-----DTRLTRRHVMKGLLLLLGAGGGWQLW-QSETGEGLRADYRTA 114 +P A+ A + RR M + + +G G + + L AD RT Sbjct: 61 AAMPAVPAALAQQTLNGASKHMGRRKAMGLMAIAMGTGCSVLIANRHWRDSALLADLRTG 120 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVL 171 G V R L DGS++ ++T +A ++RFD +R + L G IA+T+ D+ RP V Sbjct: 121 VGEVRRMVLADGSVMLMDTSTAVNLRFDEGERRLVLIKGRIALTSGSDSEAQRYRPLFVQ 180 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T GQ+ ALGT F + +++ TQ+ V AVE+ A +Q +++ GE F AS Sbjct: 181 TPHGQVRALGTRFQTQVREDGTQVQVLSDAVELRP-QATSQVQLLRQGEQAWFDASGVHE 239 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 +K D + +WT +L PL ++A L RYR G L CD VA L +SG F L++T+ Sbjct: 240 LKAGDGDGDAWTDGLLVARSMPLSVLVAQLGRYRAGYLACDERVAQLPISGVFSLRDTER 299 Query: 292 ILNVIAQTLPVKIQSITRYWINISP 316 L+++ +T P++++ TRYW+ + P Sbjct: 300 SLDLLQKTWPLELRRRTRYWVTLVP 324 >UniRef50_Q4ZM65 FecR protein n=23 Tax=Pseudomonas RepID=Q4ZM65_PSEU2 Length = 327 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 100/316 (31%), Positives = 156/316 (49%), Gaps = 11/316 (3%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + L +A W + + + +W D+++ AW Q+ + + +P Sbjct: 5 PVSVRVLNAAIEWQLNMDSNGGNDAE---LARWLAADEEHARAWSQLGMVNQRF-ALPAG 60 Query: 67 VASRALHDTR---LTRRHVMKGLLLLLGAGGGWQLW---QSETGEGLRADYRTAKGTVSR 120 A +AL + R + G L + G L+ + + AD RTA G Sbjct: 61 PARKALQQSPGALRHRLRKLGGGLAGVFMALGLALFVGDRYLPIDYWLADQRTATGEQRD 120 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 +L D +L+ LNT SA DVRFDA QR V L GEI + T RPF V T G++ AL Sbjct: 121 VRLADNTLIRLNTHSAIDVRFDAQQRRVILQDGEILVQTGDHDDPRPFIVETADGKMRAL 180 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F VR++ + T L V Q AV +A ++ + G+ + + + G + + Sbjct: 181 GTRFLVRRESDGTLLSVLQSAVVAHPRNASGEQV-LREGQQVLLTRNGLGPLLGMPSGVD 239 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +WT+ +L + L +++A L RYR G L DP VA LR++GTFPL +TD L + TL Sbjct: 240 AWTRGMLVVDNARLADMLAELGRYRTGHLGVDPKVADLRVTGTFPLTDTDLALKALLPTL 299 Query: 301 PVKIQSITRYWINISP 316 PV+I+ T +W+++ P Sbjct: 300 PVQIEQNTAWWVSVLP 315 >UniRef50_Q4K9E6 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K9E6_PSEF5 Length = 326 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 85/314 (27%), Positives = 136/314 (43%), Gaps = 10/314 (3%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 ++ + A+ W+ L VSP+Q+ R+QQW +D ++ +Q +E L VP Sbjct: 7 ASAQARIRDEAAAWFTRLQEPEVSPEQQLRFQQWLAEDPQHRHEFQLLEALWAATDLVPR 66 Query: 66 DVASR--ALHDTRLTRRHVMK---GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 A + RR +++ + A G A + TA G Sbjct: 67 ARLQALCATPPAKARRRPLLRFALAAGVATLAVGLGLFSGLNQPVSYSAQFVTALGERRH 126 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS + LN++S VR+ +QR + L GE D RPF V G++T Sbjct: 127 VALPDGSQIDLNSRSHLQVRYARNQRLIELVEGEALFNVEHD-TDRPFVVAAGAGKVTVT 185 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK-RIVNAGESLQFSASE--FGAVKPLDD 237 GT F VR+ + T++ V+Q V+V A + G+ A + Sbjct: 186 GTRFDVRRDERQTRVAVEQGRVKVQGRDAATDDFIALTPGQGTHVDEHGKVAQAYAVNPE 245 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVI 296 T+W L F++ L EV+A ++RYR LR AV LRL+ F +T A+L + Sbjct: 246 ALTAWRSGKLVFNNASLAEVVAEVSRYREQPLRVASAAVGELRLTSVFKSDDTQALLKAL 305 Query: 297 AQTLPVKIQSITRY 310 LPV+++++ Sbjct: 306 PSILPVEVRTLADG 319 >UniRef50_B9JNI9 FecR iron sensor protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNI9_AGRRK Length = 317 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 91/320 (28%), Positives = 140/320 (43%), Gaps = 10/320 (3%) Query: 1 MNPLLTDS-RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M+ + + +A+ W A L + A +Q W D + A+ ++ L Sbjct: 1 MSRSYDEEIDDRLAEAAAGWVARLQSADATDLDRADFQCWLHADPSHAAAYDEMNALWGS 60 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 L P + S + R V ++L + A + + Q + RADY T G V Sbjct: 61 LRDAPVSLDSLKARRSSGA-RAVGLAVMLGVIAASSYTIQQLGLIDRWRADYYTDVGEVR 119 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 LEDG+ + L+T +A VR+ A +R V L G+ K+ RPF V Q TA Sbjct: 120 SVVLEDGTQVDLDTDTAIAVRYTAGERRVELLRGQAFFDVTKNP-ARPFVVDEGQLSATA 178 Query: 180 LGTEFTVRQQDNFTQ--LDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD- 236 LGT ++V+ + V++ VEV ++ AG+++ AS + D Sbjct: 179 LGTHYSVQAPTGSLPQMVQVEEGIVEVKTGDND---TVLRAGDAMTVDASGKATLAKADV 235 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLR-CDPAVAGLRLSGTFPLKNTDAILNV 295 T+W + L FS PL +V TL RYR G + D A ++SG F L NTD L + Sbjct: 236 ANETAWRQGKLVFSATPLSKVAETLARYRRGRVLVVDAQAADRKVSGVFDLSNTDEALAI 295 Query: 296 IAQTLPVKIQSITRYWINIS 315 I LPV + +T + I Sbjct: 296 IESNLPVSVTRVTDALVFIR 315 >UniRef50_C1DFE7 Anti-sigma factor, FecR family n=2 Tax=Pseudomonadaceae RepID=C1DFE7_AZOVD Length = 317 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 133/317 (41%), Positives = 182/317 (57%), Gaps = 7/317 (2%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + +D +R ALR A+ W+AVL + V + A W+ W Q +NQWAWQ++E L+ QL + Sbjct: 1 MPSDRQRDALRMAARWHAVLCSDEVREEDRAAWRAWRAQAPENQWAWQRMELLQRQLQDL 60 Query: 64 PGDVASRALHD-TRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKGTVSRQ 121 PG++A + + + RL RR ++KG++L GA GW Q + AD R+A G R Sbjct: 61 PGNLAFQTMSEEPRLGRRTLLKGVILAGGAATLGWTARQGLPWQEWLADQRSAIGERRRL 120 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK--DALQRPFRVLTRQGQLTA 179 LEDGS L LNT SA DVRFD +R + L GEI + TA+ +RPF V T G + A Sbjct: 121 TLEDGSRLVLNTDSAVDVRFDGQRRLIELHRGEILVETARSLGGDERPFVVSTHDGLIRA 180 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT F VRQ F+++ V +HAV V A+ + IV AG++L F A + D + Sbjct: 181 LGTRFIVRQHRTFSEVTVLEHAVAVSNAAPG--ETIVQAGQALAFDAGRNLPRR-FDPLA 237 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 W L D L +++ L RYR G L DPAVA LRLSG +PL +TD L I Sbjct: 238 AEWANGRLVIDDWRLADLLDELARYRPGFLSADPAVADLRLSGAYPLDDTDRALAAIVHA 297 Query: 300 LPVKIQSITRYWINISP 316 LPV++ S TRYW+ + P Sbjct: 298 LPVRLSSHTRYWVRLLP 314 >UniRef50_Q0AEB9 Putative FecR n=2 Tax=Nitrosomonas RepID=Q0AEB9_NITEC Length = 320 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 16/321 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ Q L+ A W+ +L E + + + ++ +W+ +++ +Q A+ E L ++ Sbjct: 1 MS-ASGPPDEQLLKQALKWFFLLQSEHCTDEDKRKFNRWFCKNEAHQAAYTHAERLWSET 59 Query: 61 GGVPGDVASRALHDTRLTR-RHVMKGLLLLLGAGGGWQLWQSETGEGLRA---DYRTAKG 116 + LH+ R R +H G+ S + A Y T G Sbjct: 60 DKLKETPDIPGLHEARRRRPKHQPAGIFGWALFFLISSALMSISWLEYNAETVTYSTRLG 119 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 L DGS + +NT + VR QR + L GE A + RPF V T + Q Sbjct: 120 EQRLISLADGSRINMNTATRLHVRISYLQRKITLDAGEAVFDVAHETW-RPFVVHTDKLQ 178 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAG-ESLQFSASEFGAVKPL 235 + +GT+F V +Q + + V + AVE+ ++ G + S S+ ++P+ Sbjct: 179 IQDIGTQFNVHRQQDEISVTVLEGAVEI-------DGVRLDEGYQQYYSSRSDHAVLRPV 231 Query: 236 DDEST-SWTKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTFPLKNTDAIL 293 D E +W L F PL V L RY + DPA+A LSGTF ++ L Sbjct: 232 DTEQIAAWQHGRLIFRQTPLAAVTTELERYHPVHFIFTDPAIAHETLSGTFGTRDLPLFL 291 Query: 294 NVIAQTLPVKIQSITRYWINI 314 + + + LPV+++ + + Sbjct: 292 SSLEKALPVRVKKLPDGQTLL 312 >UniRef50_Q1IGG4 Putative FecR-like transmembrane sensor n=2 Tax=Pseudomonas RepID=Q1IGG4_PSEE4 Length = 325 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 7/314 (2%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 Q A+ WY L + V+ ++ + W Q + AW +V L L Sbjct: 13 MPDSEQLFAEATAWYYRLQADDVTSAEQQAFAAWRGQGPEQAQAWDEVLALLGALQAPAR 72 Query: 66 DVASRALHDTRLTRR-HVMKGLLLLLGAGGGWQLWQSETGE-GLRADYRTAKGTVSRQQL 123 + + R R K L + RADY TA G QL Sbjct: 73 HLREQQRQQWRRPVRRAWPKVASAAAAMVLLGLLVGQTSWPDRWRADYATATGESRSIQL 132 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 EDGS + LNT SA V A +R VRL GE D+ RPF V + G + +GT+ Sbjct: 133 EDGSRIQLNTDSALQVELTAGERRVRLLRGEAWFEVTHDS-ARPFLVRSGDGWVRVVGTQ 191 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE-STSW 242 F+V + D T++ + + VEV + AP + G++L+++AS GAV P + + +W Sbjct: 192 FSVARDDRQTRVQLDRGKVEVRVGQAP--SVFLQPGQALEYTASGVGAVHPFEPSRAFAW 249 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 + L FS +PL EV+ L RY G L A+ G ++SG F + +A+L + TL Sbjct: 250 RQRQLVFSQQPLAEVVEELNRYWPGQTLVLGDALRGRKVSGVFEIDKPEAVLKALTHTLG 309 Query: 302 VKIQSITRYWINIS 315 V+ + T Y + Sbjct: 310 VRAEQYTPYLRILR 323 >UniRef50_A6VD04 Probable transmembrane sensor n=6 Tax=Pseudomonas RepID=A6VD04_PSEA7 Length = 340 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 107/320 (33%), Positives = 171/320 (53%), Gaps = 8/320 (2%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P Q L A+ W ++ ++P Q+A + W + ++Q AW++ E L +G Sbjct: 21 PAAEAIAPQVLGEAASWLLLMQEGPLAPAQQAELESWRLRSAEHQRAWRRAERLLANIGS 80 Query: 63 VPGDVASRALHDTRLT-RRHVMKGLLLLLGAG-GGWQLWQSETGEG-LRADYRTAKGTVS 119 +P +A R L + RR V++GL L +G W W+++ AD+ TA G Sbjct: 81 LPPALARRTLERPGGSGRRAVLRGLALFIGGAPLAWWGWRAQFWRDGFGADHLTAVGERR 140 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQL 177 LEDGS + +NT SA D+R+DA QR +RL+ GEI + TA D + RPF V T QG + Sbjct: 141 HLTLEDGSQVEMNTDSALDLRYDAGQRLLRLYRGEIYLRTAADRREPPRPFLVRTEQGLM 200 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP--AQKRIVNAGESLQFSASEFGAVKPL 235 ALGT F+VR++ T L V + AV+V A A R++ AG+ ++F GAV+ Sbjct: 201 RALGTAFSVRREGTETVLAVYEGAVQVRPEDAASAADGRVIEAGQRVRFDRQRIGAVESA 260 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + + +W + +L + PL + L RY + + C+P++ LR+SGTFP+ + L + Sbjct: 261 GEAALAWRQGLLVADEMPLRQWAGELMRYGSESIECEPSLGPLRVSGTFPVDDLPLALAM 320 Query: 296 IAQTLPVKIQSITRYWINIS 315 +AQT +++ R + I Sbjct: 321 LAQTHGLRLVHQGR-RVLIR 339 >UniRef50_A5VYE0 Anti-FecI sigma factor, FecR n=4 Tax=Pseudomonas putida RepID=A5VYE0_PSEP1 Length = 318 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 110/319 (34%), Positives = 172/319 (53%), Gaps = 7/319 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M + + A W L + SP+ E ++Q W N+ AWQ+V +L ++L Sbjct: 1 MPMPDGTPAQAQVDQAIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAWQRVSHLGDEL 60 Query: 61 GGVPGDVASRAL---HDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAKG 116 G+P D++ R L + +RR +K L LL G GW + L AD TA G Sbjct: 61 AGLPKDLSRRTLDASQHPKASRRDHLKLLGLLAVGGSLGWAAREPLGLPQLLADTSTATG 120 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 + Q DGS + LNT SA D+ + A QR ++L +GE+++ + + RPF V T G Sbjct: 121 ERRQWQGSDGSRIQLNTASAIDLHYSAEQRQLKLIHGEVSLDSNPN-DNRPFHVATPVGP 179 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 LT + +R+ L V++ V + ASA A++ + GE+LQ SA+ + L Sbjct: 180 LTTFDGQLLLRENSQGLLLSVRRGEVTLFPASASARQVL--PGETLQVSANGSIQARTLH 237 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 ++ WT+ +LS PL E ++ L RYR G+LRC P VAGL++SGT+ L +T IL ++ Sbjct: 238 NDPWGWTEGVLSVQQMPLAEFVSELGRYRPGLLRCAPEVAGLKVSGTYQLDDTGQILQLL 297 Query: 297 AQTLPVKIQSITRYWINIS 315 ++LPV+++ TRYW++I Sbjct: 298 TRSLPVRVEYRTRYWVSIG 316 >UniRef50_C9NLK7 Transmembrane sensor n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NLK7_9VIBR Length = 314 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 98/313 (31%), Positives = 165/313 (52%), Gaps = 7/313 (2%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + R+++ AS W A + + V+ Q + + W + DN +AW+Q+E+L+ + +P Sbjct: 1 MERVSRKSIEQASLWMARMWSDDVTEQDKRAFHLWRTRHPDNDYAWRQMESLQQKFTSLP 60 Query: 65 GDVASRALH---DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 + + R++RR V+ + L L +Y +A G V Sbjct: 61 DPQSGSKVLGTYRQRVSRRQVLIWGGVSLATM-SLVLSSDAAMPQGETEYASATGEVKPI 119 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 +L DG+++ LNT S V F+ HQR +RL GEI +TT PF V+T QG +T +G Sbjct: 120 KLSDGTVVVLNTASRMRVDFNQHQRVIRLMEGEIMVTTGHHLT--PFHVITPQGSVTPIG 177 Query: 182 TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTS 241 T+F+VR + T++ V + V + + AQ + + AGE +FSA G + L Sbjct: 178 TKFSVRLEPEQTRVSVFEGEV-IAKSQRQAQGQHLLAGEKSEFSAYHQGRKQSLLATDAL 236 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 W ++ + D PL E IA L+RYR GV++ P ++ LR+SG + +++TD L + Q LP Sbjct: 237 WLEEKILAHDTPLPEFIAELSRYRRGVIKVSPELSALRISGVYSIRDTDQTLENLRQILP 296 Query: 302 VKIQSITRYWINI 314 +++ TR+W++I Sbjct: 297 IEVHFRTRFWVSI 309 >UniRef50_Q15VP5 Putative FecR n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VP5_PSEA6 Length = 336 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 76/333 (22%), Positives = 132/333 (39%), Gaps = 25/333 (7%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR--- 57 M+ + + + A+ + A L +S ++E + W ++ ++Q + + + Sbjct: 1 MSSNMN--QEVIQQQAATYVARLYSGELSAEEEMQIYVWCDRSPEHQQEFDSMLAIWDTS 58 Query: 58 -NQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRA------D 110 + + + L+ W L +A Sbjct: 59 NQLFQTAQPNKNKKMKKKKKNAYWLTSVAASLVCTVLVMWYLTLPGPAPLYQAAIPKPNT 118 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y TA G +S L DGS +TLNT SA + F QR V L GE AKD R F + Sbjct: 119 YHTAIGEISTVGLPDGSAVTLNTDSAIRINFTGQQRRVWLERGEAFFDVAKD-ESRIFSI 177 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA--------SAPAQKRIVNAGESL 222 T + + +GT+F VR+ D ++ V + V + + + ++ AG Sbjct: 178 NTGEKTIRVIGTKFNVRKSDATLKVSVTEGLVAIQPSALASSEHIDFEEAETLLPAGSVG 237 Query: 223 QFSASEFGAVKPLDDESTS---WTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGL 278 F+ + E + W + I F+++PL VI RYR + + + L Sbjct: 238 AFNGTSEVITHVTSKEVLANQQWRQGIFRFNNEPLANVITEFNRYRLKKITLQNRDLGKL 297 Query: 279 RLSGTFPLKNTDAILNVIAQTLPVKIQSITRYW 311 ++SG F LK+ D+IL+ + LPV+I Y Sbjct: 298 KISGVFKLKDGDSILSALEAALPVEIDRYPEYI 330 >UniRef50_A6SZM2 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZM2_JANMA Length = 329 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 101/312 (32%), Positives = 149/312 (47%), Gaps = 9/312 (2%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD--- 66 + +A W L P Q ++QW QD + A + +E + +P Sbjct: 15 DPIVEAAIDWIICLRSGDAGPVQYEAFKQWRLQDVRHDTAIRHLEQVLGTFDSLPASSHV 74 Query: 67 ---VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 L + LLL+G+G G + + AD RT+ G L Sbjct: 75 RSSARRALLKSPDRRKLLRNTLALLLVGSGTGLLAQRITPLNTVTADLRTSTGQRKHMHL 134 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS + LN +SAAD+ FD R + L GEI + A DA QRPF V + +G + ALGT Sbjct: 135 ADGSQIWLNARSAADIDFDESTRRIHLRSGEIVVDVAADA-QRPFIVESAEGSMRALGTR 193 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F VRQ++ T L V +V + + R + AGE+ +F S+ + + +W Sbjct: 194 FLVRQEEGATVLAVLHSSVRI--DAKDGASRTLVAGETARFDQSQITVIDTASGAAAAWV 251 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + D+PL EVIA + YR+G LR P LR++GTFPL ++ L +A+TLP+ Sbjct: 252 DGFIEVHDRPLSEVIAAMRPYRSGFLRVTPQAGALRVTGTFPLDDSKRTLAALAETLPIV 311 Query: 304 IQSITRYWINIS 315 I+S T YWI+I Sbjct: 312 IRSRTDYWISIE 323 >UniRef50_Q2RUF5 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUF5_RHORT Length = 328 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 91/319 (28%), Positives = 140/319 (43%), Gaps = 16/319 (5%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 + L+ A+ W+A L + + + W +D A++Q E L L +A Sbjct: 14 PEKFLKQAAIWHARLREDD---RHRKAFALWLGEDPRKAEAFRQTERLWAALEAPTAALA 70 Query: 69 --------SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG--EGLRADYRTAKGTV 118 R + RR + + L + G L G + LRAD TA G Sbjct: 71 TDGAALMVRRQRRPPIIWRRSAGRRVALAVVLALGLVLAPRGQGLIDSLRADDVTAPGER 130 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 L DGS++ LNT SA V R +RL+ GE A DA RPF V T G +T Sbjct: 131 RSLVLADGSVVALNTDSALAVAMGGDHRRLRLFRGEAWFEVAHDAR-RPFVVETGDGTVT 189 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD- 237 GT F +R + T++ + + VE+ A A Q +I+ GE + GA+ D Sbjct: 190 VTGTRFNLRIDEAGTRVSLSEGRVELSPAHAAGQVKILRPGEQAVVGKTAVGAIDTFDAT 249 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVI 296 T W + + F D L +V+A L RYR G + +A LR+SG F + + + +L + Sbjct: 250 AVTGWRRGQIVFYDTALRQVVAELNRYRRGPILLARRDLADLRVSGVFDVSDPEGVLAAL 309 Query: 297 AQTLPVKIQSITRYWINIS 315 TLPV++ + + + Sbjct: 310 TGTLPVRMTKVGGLLVVLR 328 >UniRef50_A9BWH6 Anti-FecI sigma factor, FecR n=2 Tax=cellular organisms RepID=A9BWH6_DELAS Length = 323 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 116/309 (37%), Positives = 166/309 (53%), Gaps = 3/309 (0%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 R+AL A+ W+ L G + + WQ+W++ D +Q AW +V+++ QL +P +A Sbjct: 10 DRRALHEAAAWHVKLRGASATEGLQQDWQKWHDADPAHQRAWLRVQSVTAQLSHLPAPLA 69 Query: 69 SRAL-HDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 +AL TRR V++GL L LG+G W W+ E +A RTA G +L DG Sbjct: 70 RQALGRRASPTRRSVVRGLALGLGSGATAWMAWKGAPLESWQAGQRTATGERRDLKLPDG 129 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 SL+ L+T +A D FD QR +RL G I + T DAL RPF V T QG + ALGT FTV Sbjct: 130 SLVALDTATALDTVFDDRQRVLRLHRGRILVATEPDALGRPFSVQTPQGHVLALGTRFTV 189 Query: 187 RQQDNFTQ-LDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 D+ + V + AV + A + AG+ FS+S D + SW + Sbjct: 190 HLADDGLCHVTVLEKAVRLQPLDGDAPSAQLQAGQQAAFSSSATQPPTSADPFAASWHEG 249 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 L D PLG++I L RYR G L C VAG+ +SG FP+ +TD L + P++++ Sbjct: 250 GLVALDMPLGQLIDALARYRPGYLGCSAEVAGMLVSGAFPVDDTDRALAALVSRFPLQLR 309 Query: 306 SITRYWINI 314 S TRYW+ + Sbjct: 310 SRTRYWVEV 318 >UniRef50_A1K836 Putative transmembrane sensor n=1 Tax=Azoarcus sp. BH72 RepID=A1K836_AZOSB Length = 328 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 158/305 (51%), Gaps = 5/305 (1%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 AL A+ W+ +L+ + RW W ++ AWQ+VE+L + VP A Sbjct: 16 PAAALEQAAEWFVLLASGEADAEDHRRWLAWRAGCPSHEAAWQRVESLSGRFREVPPPFA 75 Query: 69 SRAL--HDTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGTVSRQQLED 125 S A+ RR +K L +LL G G W + +S G A TA G L D Sbjct: 76 SVAIVGPSRGAGRRRALKQLAVLLATGAGAWGVQRSYQGMVWSASATTAIGEQRDWVLAD 135 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALGTE 183 GS LTL+T SA V F QR +RL G + + TA D R V T QG++ ALGT Sbjct: 136 GSRLTLDTDSALAVDFGLGQRLIRLQRGRVLVETAPDPAPIARSIAVETAQGRVIALGTR 195 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F+VRQ+ +Q+ V + V++ A I+ AG++++F+ + F +PL T+W Sbjct: 196 FSVRQEAGTSQVVVLEARVDIRPADNANAGTILAAGDAVRFTRAGFKDRQPLGLHDTAWA 255 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 K +L + L ++ A L+RYR L CDP +A LR+SG FPL+++DA L + +LPV+ Sbjct: 256 KGLLMADNWSLLDLAAELSRYRRQPLSCDPRIAALRISGVFPLRDSDAALAAVTDSLPVR 315 Query: 304 IQSIT 308 ++ Sbjct: 316 VERRA 320 >UniRef50_A4VS46 Probable transmembrane sensor n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VS46_PSEU5 Length = 320 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 103/312 (33%), Positives = 159/312 (50%), Gaps = 8/312 (2%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 + L+ A+ W+A+L VS + W W EQ ++ AW +VE + Q + D R Sbjct: 6 RVLQQAAEWFALLQSGSVSASERRAWAAWLEQ-PEHAQAWAKVERISGQFQPLTSDAIGR 64 Query: 71 A----LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 A L + TRR +K L +L G + + AD RTA G V +L DG Sbjct: 65 AAGAMLQQRQSTRRQALKVLSVLCGGAVLTVAGGALPWQRWAADERTAVGEVRDLRLADG 124 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT-EFT 185 + L LNT SA D+RFDA +R + L +GE+ I RP + +R+G + + F+ Sbjct: 125 TRLWLNTDSALDIRFDAKERRLALRHGELLIDAPASRRGRPLVLSSREGHVRSEQAARFS 184 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 +RQ++ T+L V V++ L V AG+ F G + E +W Sbjct: 185 LRQEEGRTRLSVFAGVVDIQLEGFG--VTSVPAGQQAAFDRRHVGPLAAARAEHQAWATG 242 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQ 305 +L ++ L + +A L+RYR+G L CDP +A LR+ G FPL +TD +L +A TLPV+I+ Sbjct: 243 VLLADNQRLEDFLAELSRYRHGYLGCDPRIADLRVVGAFPLADTDRVLQALAATLPVRIE 302 Query: 306 SITRYWINISPL 317 +W+++ PL Sbjct: 303 RRMAWWVSLEPL 314 >UniRef50_Q15XC6 Putative FecR n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XC6_PSEA6 Length = 350 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 31/340 (9%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 + +++ R AS W A + + ++ + W +++ +++ L +++ + Sbjct: 8 PNDKKRVKREASEWIARMEQDELTASDKTELNAWLAISPEHEKQLKRLAQLWDKMSEIGE 67 Query: 66 DVASRALHDTRLTR------RHV------MKGLLLLLGAGGGWQLWQSETGEGLRADYRT 113 + + + + R L+L + L S Y T Sbjct: 68 RSSLQEQSTEKHKKYSLFGHRLAQLSYKTAAFAALVLAIPIIFYLQGSLENSSKNGQYFT 127 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 G L DGS L LNT S +V + QR + L+ GE A+D RPF V Sbjct: 128 KIGEQKNIILTDGSELLLNTNSIVEVNYTRKQRNITLFQGEANFGVARDK-SRPFTVKAG 186 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL-------------ASAPAQKRIVNAGE 220 G + ALGT F+VR + N + V V V A + IV+AG Sbjct: 187 TGDVRALGTNFSVRLKGNLVNVLVSHGTVRVRANENIDATHHADNFAHKDKNQVIVSAGN 246 Query: 221 SLQFSASEFGAVKPLDDESTS----WTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAV 275 ++ F E +V+ + DES + W K LSF D+PL +V+A L+RY N ++ D ++ Sbjct: 247 NVVFDDIEVESVEQVSDESIAKKLYWRKGFLSFDDEPLSDVVAELSRYTNLNIVIADKSI 306 Query: 276 AGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 +++ G +P+ N + + + L + ++ ++ + I+ Sbjct: 307 QAMKVGGFYPIDNLETVFTTLELNLGLHVKKMSGGYYYIT 346 >UniRef50_A9VXG0 FecR protein n=6 Tax=Methylobacterium RepID=A9VXG0_METEP Length = 324 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 6/309 (1%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 R A+ W A LS + ++ W + D + + +++ L +LG +P Sbjct: 18 DEDPVEREAAAWVARLSSSDATEADHRAFETWRKADPVHAAVYAEMDALWRRLGHLPDPR 77 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 + T + GL + G +++ + LRAD + G + L DGS Sbjct: 78 PRKTSDKTSNKTPKSLAGLA-AVALIAGALAYETGLLDRLRADLWSGVGAIEHATLPDGS 136 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 + LNT +A VRF +R + L GE + D RPF V + A+GT F +R Sbjct: 137 RVDLNTDTAIAVRFTEGERGIALLRGEASFDVVPD-RSRPFVVRGGGLSVRAVGTRFFLR 195 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDIL 247 + V + V+V S + +V+AGE ++ + +T+W L Sbjct: 196 ADGADRPVGVAEGRVDVSAESG---RVVVSAGEEVRIGGDALHVAAADVERATAWRDGRL 252 Query: 248 SFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 +S KPL V+A L RYR G ++ D + R++G F +NTD L+VIA T+ +I+ Sbjct: 253 IYSGKPLAAVLAELNRYRRGRIVLLDRGLGERRVTGAFDARNTDDALDVIAATMGTRIRR 312 Query: 307 ITRYWINIS 315 ++ + + Sbjct: 313 LSPLLVLVG 321 >UniRef50_A9BUB2 Anti-FecI sigma factor, FecR n=5 Tax=Proteobacteria RepID=A9BUB2_DELAS Length = 356 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 107/321 (33%), Positives = 161/321 (50%), Gaps = 12/321 (3%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV-PG 65 R+A+ W+A+L + S ARWQ+W ++D D+ AW ++ + L G+ PG Sbjct: 32 PLPAGVARAAAGWFALLQSGQASAADRARWQRWLDEDADHGRAWAHLQAVTGALTGLNPG 91 Query: 66 DVASRALHDTRLTRRHVMKGLLLLLGAGGG--WQLWQSETGEGLRADYRTAKGTVSRQQL 123 R L R + GL LG G W ++ + + ADY + R L Sbjct: 92 GAGYRGLSAAPRAARRRLLGLFAGLGTAAGAGWLASRTPQWQQMAADYASGT-QRRRWTL 150 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL---QRPFRVLTRQGQLTAL 180 DG+ + L SA ++FD +R +RL GE TT A PF V T G++ AL Sbjct: 151 PDGTDMLLGPGSAVALQFDGSERRLRLMAGEALFTTGHPAGTLGDLPFVVETAHGRVRAL 210 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F VR ++ V + AVE+ A A R + AGE++ F+ + + V+P Sbjct: 211 GTRFMVRSSHAGARVAVFERAVELRPAGTGASARRLQAGEAMDFTRTGWSTVQPAGPADD 270 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN-----TDAILNV 295 +W++ L ++ L + +A L RYR G L DPAVAGLR SG FPL TDA+L + Sbjct: 271 AWSRGQLWVDNQRLDDFLAELNRYRPGWLHADPAVAGLRFSGVFPLDEGGIDGTDAVLAM 330 Query: 296 IAQTLPVKIQSITRYWINISP 316 + LPV+++ TR+W+ + P Sbjct: 331 LPGALPVQLRWRTRWWVVVEP 351 >UniRef50_Q82WU9 Putative transcriptional regulator, putative n=1 Tax=Nitrosomonas europaea RepID=Q82WU9_NITEU Length = 343 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 83/324 (25%), Positives = 135/324 (41%), Gaps = 19/324 (5%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 D R + + A W+ + + V+ + A + W + +N A+ E L ++L + G Sbjct: 19 DDDRNHSGKEALDWFVRMQSDSVTEAERAAFIAWRDAKPENAQAYADTELLSHKLAALKG 78 Query: 66 DVASRALHDTRLTRRHVM-------KGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 A T + +M L LL+ WQ+ +Y T+ G Sbjct: 79 HSAYHIPRLTPDQKPSLMTMQSFNRIALFLLIIFSSAGLWWQTGIVSD---EYVTSAGEQ 135 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 LEDGS L LNT S ADVR+ +R V L+ GE A D R F VL Q+ Sbjct: 136 RHIPLEDGSKLELNTASHADVRYTRLERIVTLYSGEAYFDIA-DENYRRFVVLAGGLQVR 194 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK------RIVNAGESLQFSASEFGAV 232 +GT F VR + + V + VE+ + + + AG+ + + Sbjct: 195 DIGTRFIVRHDNEQVTVTVLEGEVELTRPALSDRSGELPATLTLLAGQQSHYRNEVITSA 254 Query: 233 KPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTD 290 P+D + +W + L F PL EV+ L RY + DPA+A ++G+F + Sbjct: 255 IPIDSVAAAAWREGKLIFKATPLREVVQELARYHPLRFVIHDPALADETVTGSFHIGELS 314 Query: 291 AILNVIAQTLPVKIQSITRYWINI 314 + L + Q L ++I + +I Sbjct: 315 SFLRALEQVLQIQIDTRNPDIASI 338 >UniRef50_A6X2N0 Anti-FecI sigma factor, FecR n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X2N0_OCHA4 Length = 314 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 12/306 (3%) Query: 16 ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH-- 73 A W+ +L + VS + W D ++ A+++ + L + V + Sbjct: 13 ALEWFVLLQDKTVSADDRRAFSAWIASDPAHRVAYERAQTLWQRFDAVKPEYDRIRQSGH 72 Query: 74 --DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTL 131 D R+ RR V+ G L L G L + GL A Y+T G L DGS + L Sbjct: 73 KSDGRVGRRGVVLGGLAALVLLPGAYL---LSRPGLFATYQTGVGERRSFTLADGSTVEL 129 Query: 132 NTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDN 191 + SA + F + R + L G+ A D RPF V G +TALGT F V+ D Sbjct: 130 GSYSALSLDFSGNGRNLVLHEGQGFFQVASDP-SRPFVVSANGGTITALGTAFDVKLIDR 188 Query: 192 FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE-STSWTKDILSFS 250 + V +HAV V + ++ G + + E + D + +W D + F Sbjct: 189 AVTVSVVEHAVSVAFGQSD--PVRLDEGWQITYGGDEAALPQRADPQTVEAWRNDRIIFE 246 Query: 251 DKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 D PL V++ L RYR G + D + + ++ F ++ +A L IA+TLPV++ + + Sbjct: 247 DVPLSRVLSELERYRRGRIFLTDTEIGNMPVTAIFDTRDAEAALATIAETLPVRVLNGSG 306 Query: 310 YWINIS 315 + ++ Sbjct: 307 WVTVVT 312 >UniRef50_A9IDD5 Transmembrane sensor n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IDD5_BORPD Length = 331 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 103/324 (31%), Positives = 158/324 (48%), Gaps = 15/324 (4%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ-LGGV 63 ++ + A+ WYA+L S +ARWQ W ++ AWQ VE++ + L + Sbjct: 1 MSQPSHAVMEHAAQWYALLISGEASAADQARWQAWLAAHPHHRQAWQYVESVSQRVLAPL 60 Query: 64 PGDVASR-------ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG-----LRADY 111 R A+H+ RR V+ G+ + GA + ++ ADY Sbjct: 61 QDTPDPRQMAAKVYAVHERARMRRRVLAGIGTIAGAAALGWAARPDSPMAGAIAAWTADY 120 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT G + + L DGS + LNT SA D R + L GEI ++TA+ RPF V Sbjct: 121 RTGAGDIRQFTLADGSQVWLNTASALDADMRGGLRRLTLAAGEILVSTAR-GDARPFVVD 179 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T QG++ ALGT FTVR++ T L V AVE+ A A A + I AG +F+A A Sbjct: 180 TAQGRMRALGTRFTVRREQGHTFLAVFDGAVEIRTARAGAVQVI-PAGWQTRFAAGTIEA 238 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 P D +W++ L + L +V+ L RY + P VA R+ GTFPL++ D Sbjct: 239 SVPADLAREAWSRGELVAWNLSLADVVDELGRYHPAHISLAPNVAQRRVFGTFPLRDMDG 298 Query: 292 ILNVIAQTLPVKIQSITRYWINIS 315 L +++Q ++++ +WI+I+ Sbjct: 299 ALAMLSQAAALRVRRPWPWWISIT 322 >UniRef50_Q88PI4 Transmembrane sensor, putative n=6 Tax=Pseudomonas RepID=Q88PI4_PSEPK Length = 328 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 85/311 (27%), Positives = 127/311 (40%), Gaps = 14/311 (4%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 A+ W+A + + W D+ ++ ++ + + +P Sbjct: 15 DAVREQAAAWFARVQDAPRDAGLHKQLHAWLASDEHHREEYEHLCRVWQAADFIPRQHLE 74 Query: 70 RALHD-------TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 R R + + ++ G GW W + +TA + + Sbjct: 75 ALCRPDPVQQLPRRRFMRQALAASVAVVALGLGWSGWHHLQL-NHQGSLQTAFNERRQVE 133 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 L DGS L LN + V F A QR VRL GE+ + A D+ RPF V T QG + GT Sbjct: 134 LPDGSHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDS-NRPFVVDTAQGSVIVTGT 192 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD--EST 240 F VR T++ V+Q +V V + AG+ A A + T Sbjct: 193 RFDVRLDPASTRVAVEQGSVRV--QGKGDSPAQLTAGQGSHIDAQGLVAAPYAVNTGAIT 250 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDP-AVAGLRLSGTFPLKNTDAILNVIAQT 299 +W + L F + L EV+A +RYR LR P VA LRLSGTF +TDA+L + Sbjct: 251 AWRQGKLVFDNATLAEVVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTDALLRALPSI 310 Query: 300 LPVKIQSITRY 310 LPV I++ Sbjct: 311 LPVAIKAHEDG 321 >UniRef50_B7WXN1 Anti-FecI sigma factor, FecR n=2 Tax=Comamonas testosteroni RepID=B7WXN1_COMTE Length = 317 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 110/313 (35%), Positives = 161/313 (51%), Gaps = 7/313 (2%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 L A+ W L+ E ++ + A +++W +++ AW + E L +LGG+P +A Sbjct: 2 EAHLLDEAADWLVRLNDEGLTAAEHAAFERWRHTSAEHEGAWMRAERLMGKLGGLPTALA 61 Query: 69 SRAL--HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 L R R V + +LL GGW W+ +G AD RT G L DG Sbjct: 62 MPTLDRSQRRSRRAAVARLAVLLAAVPGGWMSWRMAQQQGWTADLRTVTGEQRSVTLADG 121 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--QRPFRVLTRQGQLTALGTEF 184 S L L+T SA D+RFDAHQR + L G I + TA D RP V T G+L ALGT F Sbjct: 122 SRLLLDTASAVDIRFDAHQRLIHLRRGSILLETAADPSGVDRPLLVATAVGRLRALGTRF 181 Query: 185 TVRQQDNF--TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 +V+Q L V Q AVEV +A ++V AG + +A GA++ + +W Sbjct: 182 SVQQDSEGQFVDLAVTQGAVEVTPHAASRPAQVVPAGNWARLTAQGAGALQTASAQQLAW 241 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + +L P+ EV A L RYR+G+L C P V +++SG +PL +TD L ++A+T V Sbjct: 242 AQGMLVADAMPMAEVCARLARYRSGLLHCAPEVMAIKVSGAYPLADTDRALAMLAETYAV 301 Query: 303 KIQSITR-YWINI 314 + R YW+ + Sbjct: 302 SVHQRWRGYWVTV 314 >UniRef50_A3WYF9 Putative FecR n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYF9_9BRAD Length = 326 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 84/331 (25%), Positives = 135/331 (40%), Gaps = 21/331 (6%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ +A W+ L S A +++W ++ A+++V++L + Sbjct: 1 MDRESRTKPTDIDDTALEWFTRLR-GETSAADRAAFERWVAASPSHRQAFRRVQSLWSAA 59 Query: 61 GGVPGDVAS--------------RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG 106 VA RA + +R V ++ L GG L + + Sbjct: 60 ESPGVRVAQEESKNLSAYLDAMDRAKTRRKARKRGVATVIVGLAVLGGVIALERPNLFQD 119 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 +RAD +A+G +L DGS + L+ SA RF +R V L G + K A Sbjct: 120 MRADAVSARGERRTIELPDGSTVLLDADSALTQRFTNGERRVVLLRGGAYFSVVKAAQS- 178 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA 226 F V G + LGT+F VR ++ T + V Q V V S Q+ ++ G+ + F Sbjct: 179 -FVVEASSGTVEVLGTKFDVRLSNDDTVVTVAQGRVAVT--SPSMQRALLEPGQQVTFDK 235 Query: 227 SEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTF 284 G V+ D S +W + F +VI L RYR G + A+A R+SG+F Sbjct: 236 VGVGPVRNADLAASMAWHEGRFVFYQARFADVIGELQRYRPGRMVIASAALADSRVSGSF 295 Query: 285 PLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 L + DA L + T+ + SI + Sbjct: 296 TLDDPDAALESLRSTVNFETYSILGRLTVLR 326 >UniRef50_Q48ML1 Sigma factor regulatory protein, FecR/PupR family n=13 Tax=Pseudomonas RepID=Q48ML1_PSE14 Length = 325 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 11/323 (3%) Query: 1 MNPL-----LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVEN 55 MNP +D + A W + + +++ WQ W + ++Q AW ++ Sbjct: 1 MNPNNESLNKSDISLGVAQQAVGWLLEMQEGTLDARRQQAWQLWLNGNAEHQRAWAHMQR 60 Query: 56 LRNQLGGVPGDVASRALHDTRLTRRH--VMKGLLLLLGAGGGWQLWQSETGEGLRADYRT 113 + +L G+ +A AL+ + R + LLL G+ GW L + + L ADY + Sbjct: 61 VNQRLSGLSSPLAHAALNAPKSASRRHALKLLLLLGAGSAAGWSLREQIALQPLLADYNS 120 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 G + L DGS + LNT SA DVRFDA QR ++L GEI I+ + D RP +L+ Sbjct: 121 GVGEQRKVALSDGSQVQLNTASAVDVRFDAQQRLIKLLQGEILISASAD--SRPLSLLST 178 Query: 174 QGQLTA-LGT-EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 +G + A G F +RQ D TQL V A+E+ ++ A + FS + + Sbjct: 179 EGTVRASTGASRFNLRQLDGRTQLAVFAGALEIAPLGRSGPGLMLRASQQATFSRDAWDS 238 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 VKP+D S +W +L S L + +A L RYR G L CD VA L +SG +PL +++ Sbjct: 239 VKPIDAGSGAWADGMLVASRMKLSDFLAELGRYRRGRLNCDAKVANLLISGNYPLADSER 298 Query: 292 ILNVIAQTLPVKIQSITRYWINI 314 IL+++ LPV +Q T YW+N+ Sbjct: 299 ILDMLELALPVHVQRFTWYWVNV 321 >UniRef50_A6W3B6 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B6_MARMS Length = 313 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 139/320 (43%), Gaps = 14/320 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M P D R ++ A+H A L + S + +W D DN+ AWQ + + Sbjct: 1 MQPNQIDLER--IQQAAHLMARLWSDEPSKHDQHACNKWRAADPDNEKAWQCLIQAQAHF 58 Query: 61 GGVPGDVASRALHDTRLTRRHVMK----GLLLLLGAGGGWQLWQSETGEGLRADYRTAKG 116 G P + +++RRHV+ L AGG + + TA G Sbjct: 59 GDAPKETIQIIARSRKMSRRHVLSLMGLSAGGLFFAGGYIHNRSISSHASYYKNLATATG 118 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 V L D + L +NT++ + + +L GE + + P+++ T G Sbjct: 119 EVRSFPLSDINKLVMNTKTTLAM---PTEHQFKLDDGEFFLDVS---QATPYQIETMDGI 172 Query: 177 LTALGTEFTVRQQDNFTQLDVQQH-AVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 ++ + +R+ D+ T++ V +V++ L ++ GES+ F+ + Sbjct: 173 ISFNQGKLNIRRTDDITRISVFSGQSVQL-LGKQMHNPLSISPGESVSFNTINTSRISST 231 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 D + W L PL + I L+RYR G++R P + L ++G F + NTD IL Sbjct: 232 DPNTIGWVTGKLVAQRMPLTDFIHELSRYRKGIVRVAPELRQLAVTGVFSIDNTDQILQQ 291 Query: 296 IAQTLPVKIQSITRYWINIS 315 + +LP+ I +T YW+N++ Sbjct: 292 LQASLPINIYQLTPYWVNVT 311 >UniRef50_C6DBT1 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacterium RepID=C6DBT1_PECCP Length = 322 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 12/322 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M D A W +L + +++W ++ ++ A Q++E + Sbjct: 1 MARRHMDDP--IAEQAIEWMVLLRSGEATQTDYDEYRRWRYENPLHERACQRIEQTLGKF 58 Query: 61 GGVPGDVASRALHDT---RLTRRHVM--KGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 + + + RR V+ ++ + + L Q L +D +TA Sbjct: 59 QPLLAALPHEPIRQALLAPSGRRKVLQYGLGMVAVASLSSLLLNQHYPLSPLLSDVKTAT 118 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQ--RTVRLWYGEIAITTAKDALQRPFRVLTR 173 + L DGS L LN ++A D+ + R V + G I DA QRPF + T+ Sbjct: 119 AQRQQVPLSDGSTLMLNARTAVDINVEPKNSIRQVGVLNGGIFAKIKPDA-QRPFIIDTQ 177 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 G + AL VR + + V + +V + Q ++AG+ + F S V Sbjct: 178 MGNIVALQANVNVRYESGGVHVGVLDNIAKVT--NHAGQSLRLHAGQGVWFDRSTLYQVA 235 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 + +W + L D+ L VI+ L Y G++R DPA+A LR+SG FPL N + L Sbjct: 236 VTPETEIAWMQGRLEVRDRSLASVISALRDYTPGIIRLDPAIADLRVSGNFPLDNLNYTL 295 Query: 294 NVIAQTLPVKIQSITRYWINIS 315 + +AQT+P+ I T YWI+I Sbjct: 296 DSLAQTMPIAIVHTTDYWIHIR 317 >UniRef50_A3NJI2 Sigma factor regulatory protein, FecR/PupR family n=38 Tax=Burkholderiaceae RepID=A3NJI2_BURP6 Length = 334 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 103/321 (32%), Positives = 161/321 (50%), Gaps = 10/321 (3%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + R A W+ L S AR +W + + AW+ +E + +LG V Sbjct: 10 PPAVPERVARRAVQWWVELGAAPASDAMRARLARWRAEHPAHDAAWRHIEAVNGRLGHVA 69 Query: 65 GDVASRALHD------TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 +++RA +R R + +LL GG W AD RTA G Sbjct: 70 SALSARAARAALLPPRSRGRRAALKALAVLLFAGGGAWTGQAYLPWRAWGADVRTALGER 129 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQG 175 L DG+ + LNT +A D+RFD R VRL GEI +T+ +DA + R + T G Sbjct: 130 RTITLADGTTVVLNTDTAIDIRFDDATRGVRLLRGEIMVTSGRDAARAVPRALVIATAHG 189 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF-GAVKP 234 + +GT F+VR++ + T++DV AV + A + ++ AG F+ G + Sbjct: 190 DVRPVGTRFSVRERGDATRVDVFDGAVRIAPRRAVGRAPLITAGHGADFTRDALAGPPRV 249 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 L + +W IL S+ L +++A + RYR G +RCD AVA LR+SGT+PL +TD IL+ Sbjct: 250 LGASAGAWVDGILVASNLRLADLLAEIDRYRPGRVRCDAAVANLRVSGTYPLDDTDRILD 309 Query: 295 VIAQTLPVKIQSITRYWINIS 315 + +TLPV ++ ++RYW+ + Sbjct: 310 TLRETLPVDVEYLSRYWVTVV 330 >UniRef50_Q4KKG0 Sigma factor regulatory protein, FecR/PupR family n=11 Tax=Pseudomonas RepID=Q4KKG0_PSEF5 Length = 334 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 105/325 (32%), Positives = 161/325 (49%), Gaps = 10/325 (3%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL-- 60 PL + ++ A +W L +P+ + + W Q+++ AWQ+V++L+ +L Sbjct: 9 PLKPNPDHLVVKQAINWLLRLRNNGANPKLQQQCDLWRAAHQEHELAWQRVQSLQQELTD 68 Query: 61 --GGVP-GDVASRALHDT--RLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTA 114 VP VA L + RL RR +K L L G W + AD+ TA Sbjct: 69 NLRSVPGAQVALHTLEHSSQRLGRRQALKLLSGALLLGSSAWVGKDLLGWQQWNADFATA 128 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD-ALQRPFRVLTR 173 G QL DG+ L LNT SAAD+ F+A QR ++L GEI ++ D RP V +R Sbjct: 129 VGEQRGFQLPDGTRLELNTDSAADLNFNAEQRLIKLRRGEIMVSCGADHGPARPLLVESR 188 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL-LASAPAQKRIVNAGESLQFSASEFGAV 232 L F VR +D T+L V +V + +A + V AG+S Q S Sbjct: 189 HALLEGFDARFVVRVEDRCTRLSVTHGSVAIHAPHTADGRSARVEAGQSYQISHGLAEPA 248 Query: 233 KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAI 292 PL + +W ++ + L + + + RYR+G L C AV LRLSG F L++TD + Sbjct: 249 APLAMDVGAWADGLIVTRNMRLDDFLQEVGRYRHGYLGCSAAVGNLRLSGVFRLEDTDKL 308 Query: 293 LNVIAQTLPVKIQSITRYWINISPL 317 L ++ QTLPV+++ TR+W+ + P+ Sbjct: 309 LAILPQTLPVQLRYRTRWWVTLGPV 333 >UniRef50_Q21KS4 FecR protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KS4_SACD2 Length = 320 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 131/322 (40%), Gaps = 10/322 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + +S A W L+ + V + EA + W + +Q A+ + E L + Sbjct: 1 MSNIQRNS--HIENVAIEWLVKLNRDTVPSELEAEFMAWLQSSPAHQAAYIRAEQLWQRG 58 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQ-LWQSETGEGLRADYRTAKGTVS 119 + + A + +GL +W + + ++TAKG Sbjct: 59 EALQKLAQTTAQQPVKANFYFGWQGLSACAAILIVCLCVWLLPSAQQEILHFQTAKGQQL 118 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L DGS + LNT SA DV + + QRTV L GE AKD +RPF V T QG + Sbjct: 119 HIDLNDGSKVLLNTSSALDVAYTSSQRTVSLLQGEAFFDVAKD-TKRPFDVETHQGTVRV 177 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA---QKRIVNAGESLQFSAS--EFGAVKP 234 +GT F V+ + T + V + V + S + Q ++ + F+ + Sbjct: 178 VGTRFAVQHTELDTVITVLEGKVALGDKSDSSIFEQAVLLTPNQQTTFAETKLGLKPKVI 237 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAIL 293 +++ SW K L F +PL +V+ L RY + ++ D ++A ++ L Sbjct: 238 DAEKNLSWRKQHLVFRGQPLRDVVEELNRYSSTVIVLGDASLANKNVTAVIQLGEKGVTA 297 Query: 294 NVIAQTLPVKIQSITRYWINIS 315 + L + + + +S Sbjct: 298 ETLGSALQLNVTKDNSGRVVLS 319 >UniRef50_D0KIJ1 Anti-FecI sigma factor, FecR n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KIJ1_PECWW Length = 315 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 86/314 (27%), Positives = 130/314 (41%), Gaps = 19/314 (6%) Query: 10 RQALRSASHWYAVLSGERVSPQQE----ARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 Q + A+ W S WQQW D + + Q++ L P Sbjct: 8 EQIQQQAAEWILRFSEVEQDSDDAILLYKEWQQWCLIDARHPVVYHQMQQLWASATITPA 67 Query: 66 DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 + R +R + L + GGW L Q AD RT G V R L+D Sbjct: 68 STSP----KPRSSR-----YVALAIFIAGGWLLSQ-LPYAYWLADQRTVAGEVRRIVLDD 117 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 GS L LN+ SA ++ F + +RTV L GE+ AKD RPF + + Q ALGT ++ Sbjct: 118 GSELVLNSNSAVNIAFTSQKRTVTLLRGEVYAHVAKDPRSRPFVIDSAQATAQALGTRYS 177 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 VR T + V + V + P + + AG+ + T W + Sbjct: 178 VRDAGEDTLVSVDESRVRITANKNPDIRLDLGAGQQIGLDQHHITRP-VSASTETGWIHN 236 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDP----AVAGLRLSGTFPLKNTDAILNVIAQTLP 301 L F + P +VI L+R+ G++ DP + LR +G PL N+ L ++ +LP Sbjct: 237 QLIFENAPFIQVIDELSRHYPGLIYLDPRQRQELERLRFTGVLPLNNSQQALELLQHSLP 296 Query: 302 VKIQSITRYWINIS 315 + ++ Y IS Sbjct: 297 ISVRQSFGYISWIS 310 >UniRef50_Q48JU1 FecR protein superfamily n=19 Tax=Pseudomonas RepID=Q48JU1_PSE14 Length = 342 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 119/325 (36%), Gaps = 28/325 (8%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG------ 61 +A+HW L E + + ++QW + + ++ + + + G Sbjct: 10 EHDAITDAAAHWCMRLHAEDCTAAERKAFEQWLKAHPLHAMEYEAMREVWDITGQIEPLN 69 Query: 62 ---GVPGDVASRALHDTRLTRRHVMKGLLLL--------LGAGGGWQLWQSETGEGLRAD 110 +P R RR G G Q W +T E AD Sbjct: 70 PAPALPIQATQNNQPVLRRKRRLAPLAAAAAVIALAVPVTGYVGWNQGWLPDTYESYNAD 129 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 T L DGS LN + +R+V L GE + D+ PF V Sbjct: 130 TAT-----RLVVLADGSRAELNLGTELTYANYKDRRSVTLKKGEAFFEVSHDSTH-PFVV 183 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL-ASAPAQKRIVNAGESLQFSASEF 229 +G + GT F V + ++ + + +V+V + P+ ++ G + A + Sbjct: 184 DAGKGSIKVTGTRFNVWMYQDQVRVTLVEGSVQVSSDRAHPSSSHHLDPGMQASYKAGDD 243 Query: 230 GAV---KPLDDESTSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFP 285 + D S +W L F+D PL + + + RY + +L D A +RL G+F Sbjct: 244 APLISQTDTKDSSLAWRNGKLIFNDLPLSQALPLINRYLQTPILLADTATGAMRLGGSFN 303 Query: 286 LKNTDAILNVIAQTLPVKIQSITRY 310 ++ ++L + + LPV + Sbjct: 304 TRDLSSLLASLPKVLPVYVTQNQNG 328 >UniRef50_Q82W78 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82W78_NITEU Length = 334 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 143/332 (43%), Gaps = 18/332 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN +D +A++W+A + + + + W + D N+ +Q ++ + Sbjct: 1 MNRKHSDIPAHPRDAAAYWFARVHSGSFTQSDQEAFDSWLQADDLNRKEYQALDKIWQVA 60 Query: 61 GGV--------------PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG 106 G + P + L RLT V +++++G G + + Sbjct: 61 GQISAHELRAMLAEEPEPPQQIQKRLKRWRLTISAVAATIIIVIGFAGLFMPYGWLGEPF 120 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 A+Y T +G + L DGS+L +NTQ+ A V + ++R VRL GEI + DA R Sbjct: 121 YTAEYVTDRGERRTEVLPDGSILEINTQTTALVEYFENRRNVRLAGGEIMFSVETDA-AR 179 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKR-IVNAGESLQFS 225 PF V G + GT F V + + Q+ V+ +VE+ ++ + G Q Sbjct: 180 PFTVDAGSGTVLVTGTRFNVLRDQDQVQIAVESGSVEISSGHWWNRRTEQLTDGLGAQID 239 Query: 226 ASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGT 283 P D ++ T+W + + F D+PL V+ + RY + D + +R++G Sbjct: 240 PDSMTPASPADIDTLTAWRQGKIIFKDQPLASVVKEMNRYLPQPITITDHRLDQVRIAGV 299 Query: 284 FPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 F ++ A L + +++PV++ +S Sbjct: 300 FNTGDSAAFLQALHKSIPVQVILHADGSTELS 331 >UniRef50_Q3SSZ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SSZ1_NITWN Length = 319 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 6/318 (1%) Query: 1 MNPLLT-DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M + + R+ A+ W S + +++W ++ ++N+ A++ + L + Sbjct: 1 MTADQSAQASRKRHEEAAAWVLKNRDINQSAHESRAFEEWLDRGEENRAAYEAAQRLMGE 60 Query: 60 LG-GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 + D A R R + L A G S+ L A+ + G + Sbjct: 61 ARTAILNDPALRNFKVKPRPRVAKTLAVAFLGAALAGSAFVYSDGPMRLLANAISGTGEM 120 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +L DG+ + LN SA RF A RTV L G+ AKDA RPF V GQ T Sbjct: 121 PTIELADGTTIQLNAFSAISYRFTAETRTVTLLRGQAFFQVAKDA-SRPFVVEANGGQTT 179 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG--AVKPLD 236 ALGT F +R N T++ V +HAV V + + VN G+ + A + Sbjct: 180 ALGTAFDIRLGQNSTEVTVTEHAVSVTPHTHAEPEVRVNEGQQAVYDADGKVKDVRQADT 239 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNV 295 +W + L + P+ +V+A + R+ G + + +A R+SGTF + +TD+ L + Sbjct: 240 HAVLAWRRGQLVVDNAPVADVVAEIDRHFAGRIIISNSDLAARRVSGTFTVTDTDSALAL 299 Query: 296 IAQTLPVKIQSITRYWIN 313 + ++L + + + + Sbjct: 300 LRESLGLSVIRMGPLILL 317 >UniRef50_C1DGX1 Anti-sigma factor, FecR-like protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGX1_AZOVD Length = 311 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 101/322 (31%), Positives = 153/322 (47%), Gaps = 22/322 (6%) Query: 1 MNPLLTDSRRQ----ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL 56 M L D Q + A W L + ++QW +++ A E L Sbjct: 1 MPALPDDELDQPLPPLIEEALQWLVRLHAGDAADNDWLAYEQWCRSSPEHRSAALVAERL 60 Query: 57 RNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKG 116 +LG V R RR V LL G WQ G ADYRTA G Sbjct: 61 WQELGSVL----------RRPPRRIVPIVGALLALGLGLVLSWQGH-ERGWMADYRTAMG 109 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 +L DGS L L ++ D+ FDA +RT+RL+ GE+ + A D RPF V G Sbjct: 110 EHRHLELADGSQLELAPETRLDLDFDARRRTLRLYTGELYVRVASDP-ARPFLVEAADGS 168 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 + ALGT F VR+ + +L V +HAV V ++ V AG+SL++ A +D Sbjct: 169 IRALGTGFDVRRDGSRVRLVVTEHAVRVSRGD---ERIDVQAGQSLEYGEHGLSAPVAVD 225 Query: 237 -DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILN 294 D +T+W + L F +PLGEV+ L+RY+ G+L D + L ++G F ++ DA+L Sbjct: 226 IDSATAWRRHRLLFDGQPLGEVLDALSRYQPGLLLVRDERLRRLPVTGLFDTRDPDALLE 285 Query: 295 VIAQTLPVKIQSITRYWINISP 316 ++ ++LP++++ + + I P Sbjct: 286 LLERSLPIRVRRL-PWVTLIEP 306 >UniRef50_B3PGL0 Probable transmembrane sensor n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PGL0_CELJU Length = 340 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 122/326 (37%), Gaps = 26/326 (7%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P ++ +R+A+ W ++ + SP + + QW +QD ++ A+ ++ + Sbjct: 8 PSADNNVDAIVRAAADWCMLIHSDECSPADQVAFNQWLKQDPAHEQAYNKIRQVWGLSEQ 67 Query: 63 VPGDVASRALHD------------------TRLTRRHVMKGLLLLLGAGGGWQLWQSETG 104 + ++S L +L G+ W Sbjct: 68 LTPTISSPWAQANTSPKTTQPLPIAAKTPYWPWQSIAWAVSLASILLVTLGYLGWTLNCV 127 Query: 105 EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLW-YGEIAITTAKDA 163 Y T + S L DG+ + +N + +R V + GE + + Sbjct: 128 PNEYHRYSTEQA-RSHVILPDGTRVEMNLNTQISYANYRDRRHVSINGNGEAFFNVSHNT 186 Query: 164 LQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 PF++ G +T GT F V + + V + +V V + G + Sbjct: 187 KH-PFKISAANGTITVTGTAFNVWKYGKDVAVTVTEGSVIV---QNGKDTVHLTPGMKAE 242 Query: 224 FSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLS 281 ++A V D D++ +W L D+PL + I + RY + ++ D VA LR+ Sbjct: 243 YTAKYSLKVSFGDLDQALAWQSGKLILDDQPLAKAIPQIARYLDESIILTDATVANLRIG 302 Query: 282 GTFPLKNTDAILNVIAQTLPVKIQSI 307 G + +N D ++ + Q LP+ I+ Sbjct: 303 GIYNTENLDDLITALPQILPLSIKKR 328 >UniRef50_C6XBM0 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBM0_METSD Length = 327 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 93/324 (28%), Positives = 145/324 (44%), Gaps = 15/324 (4%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 L +++ + +A W L +A +++W +Q AWQ++ Sbjct: 5 KALASEAVDPVVLTAIDWMVRLDNGHAPADVKAAFERWIAASDRHQQAWQEMTRALQPAS 64 Query: 62 GVPGDVASRALH----------DTRLTRRHVMKG-LLLLLGAGGGWQLWQSETGEGLRAD 110 + RR ++ G L+L+G G + L +S TG L AD Sbjct: 65 QLQSAQHQSPAQLAVIREVLSAPPSPQRRRLLNGMALVLVGLGTAYLLKRSPTGMALTAD 124 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 T+ L DGS LTL+ +SA D+ F A +R + L G + A D L RPF V Sbjct: 125 IATSTAERKTVILADGSQLTLDAESAIDIHFSAGKRWLTLHAGACIVQVAAD-LARPFTV 183 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 T G +TALGT F VR+Q + + V QH+V + +++++ GES F ++ Sbjct: 184 ATPHGSVTALGTRFMVRRQPDRSLAVVLQHSVLLAAGPH---QQVLSEGESAWFDSNGIA 240 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTD 290 A + +W +L ++ LGEV+ L YR LR PA + LR+ G F L + + Sbjct: 241 AAREDMRSYAAWEDGVLDVRNQSLGEVVDALRAYRKDYLRVSPAASKLRVFGVFQLDDPE 300 Query: 291 AILNVIAQTLPVKIQSITRYWINI 314 L +AQ LPV+I + I Sbjct: 301 RSLRTLAQALPVRITHYGPWLTLI 324 >UniRef50_B0KLJ0 Anti-FecI sigma factor, FecR n=3 Tax=Pseudomonadaceae RepID=B0KLJ0_PSEPG Length = 324 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 101/319 (31%), Positives = 149/319 (46%), Gaps = 14/319 (4%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV--- 63 + + A W L R + W +QD +Q AW ++E Sbjct: 4 PALDRVSEQAIDWMVELRAATPDAALLQRVRLWLQQDPAHQQAWNRLEQRLGHPLAALHA 63 Query: 64 -------PGDVASRALHDTRLTRRHVMKGLLLLLGAG-GGWQLWQSETGEGLRADYRTAK 115 A R L +RR V+ + L G W W+S+T +G AD T + Sbjct: 64 LDQRAPGQAAEARRLLMQPTRSRRDVLGAMASLGLLGTALWGGWRSDTAQGWLADLHTGR 123 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G L DGS L+LN+ SA DV+FDA QR V L +GE+ I A+D L RP RV T QG Sbjct: 124 GERRSFTLADGSRLSLNSASAVDVQFDAGQRLVVLRHGELLIQVARDPL-RPLRVRTAQG 182 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 Q+ ALGT F V Q+++ T++ V QH+V LA Q + G++ ++ + Sbjct: 183 QVQALGTRFLVSQEEDATRVVVLQHSVRASLAD--GQWAELQQGQAALLRSNTLERLTGE 240 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W + L D+PL EV+ L Y+ G +R PA GLR+ G FPL L Sbjct: 241 QQQRAAWLEGRLEVLDQPLHEVVDALRPYQRGYIRLAPAARGLRVQGVFPLDQPQQALKA 300 Query: 296 IAQTLPVKIQSITRYWINI 314 +A+ LP+ ++ + + I Sbjct: 301 LAEALPISVERYGPWLMLI 319 >UniRef50_A4Y0Z0 Putative FecR n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0Z0_PSEMY Length = 338 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 123/316 (38%), Gaps = 8/316 (2%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRN--Q 59 P T L A W +L + +AR+ QW N A+ + + Sbjct: 26 QPAPTPDSDTPLEQALDWLILL--DDADEACQARFAQWLAASPANAEAFARAQRCWQSPA 83 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 L + R + RR S+ LRAD+ TA G Sbjct: 84 LVSAAARLEQRRQPTPKRARRLGPGLAFAASLLLVVGITLHSDLLLRLRADHVTAVGQRQ 143 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 QL DGS + LNT SA R D QR +L GE AKD+ RPF V +++ Sbjct: 144 SLQLADGSRVLLNTDSAFTSRIDERQRVTQLLRGEAYFDVAKDS-SRPFEVSAGPVRVSV 202 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG-AVKPLDDE 238 GT F VR + ++ V+ +EV A + + G+S++ G + Sbjct: 203 RGTAFAVRYLGDAAEVSVEHGEIEVH-ARGNDTRIHLRGGDSIRVGPDGVGQRTRASSAS 261 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIA 297 +W + L F D+PL EV+ L RY G + + + LR++G + L +I+ +A Sbjct: 262 QLAWVQGRLVFDDRPLHEVLDELRRYYPGWIINGNARLNDLRITGNYRLSEPASIMRSLA 321 Query: 298 QTLPVKIQSITRYWIN 313 Q ++ I Sbjct: 322 QVTSAQLHEYPALLIL 337 >UniRef50_A6W1Y1 Anti-FecI sigma factor, FecR n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W1Y1_MARMS Length = 328 Score = 260 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 94/316 (29%), Positives = 151/316 (47%), Gaps = 14/316 (4%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 L +A+ W+AVL+ + VS + WQQW +D+ ++ AWQQVE++ D + ++ Sbjct: 12 LEAAAEWFAVLADKPVSEASQLAWQQWLNEDEAHRKAWQQVESVGAMFSSFQDDKSQQSA 71 Query: 73 H-----DTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEG----LRADYRTAKGTVSRQQ 122 + + RR +MKG+L + G GW W + AD+ T G VS Sbjct: 72 SYVLDNTSLINRRQLMKGVLGVTGVAALGWIGWSETSLPRIASAWMADFHTQVGQVSAYD 131 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT--AL 180 LEDG+ + LNT SA + + L GEI + T + R F V G + Sbjct: 132 LEDGTKIWLNTNSAMNRSNGHDYPGLSLVTGEILVQTKASSDSRAFSVSCAHGVIRSGVD 191 Query: 181 GTEFTVRQQDN-FTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 T F VRQ + T L V + AV + L + + G+ + F+A +P Sbjct: 192 KTRFCVRQLSDKQTVLAVYEGAVSLALLD-SQLSKTLYVGQEVVFNAQSISDTRPASLLY 250 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 SW +L D PL +A + RY DP++A LR+ GTFP + D +L++++++ Sbjct: 251 ESWRNGLLIVEDMPLANFMAEIGRYHYVHFNLDPSLADLRVVGTFPTHDMDLVLSMLSKS 310 Query: 300 LPVKIQSITRYWINIS 315 P++I+ +W+ IS Sbjct: 311 FPIRIKHPLPWWVGIS 326 >UniRef50_Q3SN47 FecR protein n=2 Tax=Nitrobacter RepID=Q3SN47_NITWN Length = 318 Score = 259 bits (663), Expect = 8e-68, Method: Composition-based stats. Identities = 79/315 (25%), Positives = 138/315 (43%), Gaps = 10/315 (3%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + + A+ W+A + + S + W D + A+ ++ L + Sbjct: 10 ADDPDHVRIVEEAAVWFATMHDGKPSAADTKALKAWLAADPRHVRAYADIDRLWTGAIEL 69 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 PG +TRR + +++ G W+ S ADYRTA G L Sbjct: 70 PGMKDRHRAARKAVTRRRFGEAVVIGAVGLGAWRYLASHP----FADYRTATGERRTVNL 125 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS + L ++ + F +R + L GE T AKDA RPF V +G+ TALGT Sbjct: 126 ADGSTVDLAAETKLSLAFTRERRGLTLHEGEAFFTVAKDAG-RPFVVEAGEGRTTALGTA 184 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-ESTSW 242 F V +D+ + V V+V L + V+AG + + + G ++ + +W Sbjct: 185 FGVDYRDDSATVIVTDSTVDVALGE---ESARVSAGSLVTYDSRHIGELRQSETGTELAW 241 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 + L F+ PLG+ + L R+R+G + ++A ++ L T+ I+ +A+ +P Sbjct: 242 REGRLVFTQAPLGQAVQALNRWRSGRIVVMSTSLAQRPITLIVNLNRTETIVAQLAEEVP 301 Query: 302 VKIQSITRYWINISP 316 ++I + T Y + P Sbjct: 302 IRIVAATPYLTLLFP 316 >UniRef50_Q1YUD9 Sigma factor regulatory protein, FecR/PupR family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD9_9GAMM Length = 343 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 130/342 (38%), Gaps = 29/342 (8%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + Q + A+ W+ ++ VS Q W + D+ A++Q+E L L Sbjct: 1 MSEIYMQFSDQVNQQAAEWFTLMQSGDVSASDREALQAWLAEHSDHDKAFKQMELLWQDL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMK---------------------GLLLLLGAGGGWQLW 99 G V RAL + + + + L + L Sbjct: 61 GDVADTAEGRALRQSVESESIAARLQQLLMAPLINLKNIFSVPTYAMALAVVCIAVGALM 120 Query: 100 QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITT 159 E + Y T G + L D S +TL +SA RTV L GE Sbjct: 121 LPIAKEPVTVYYSTQHGEIKTIVLADNSEITLGAKSAIRTHISESDRTVELLNGEAFFDI 180 Query: 160 AKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA----QKRI 215 AKD Q+PF V + +GT+F V++ + + V + V+V +A + Sbjct: 181 AKD-RQKPFSVAVNDVLIEVVGTQFNVQKIRDAVNVAVLEGIVKVFEQAASQTVSLPDVV 239 Query: 216 VNAGESLQFSASEF--GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-D 272 + AG+ + S + +W L + D L +++A RY +G + Sbjct: 240 LTAGQKVVKSNDRAFESVTAVSSSDLGAWRLGRLIYRDISLADIVADAGRYFDGKIILQS 299 Query: 273 PAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 + ++++ T + ++AQTLP+K+Q I+ I + Sbjct: 300 DDLDEVKVTMTLRTDQVGQLPEMLAQTLPLKVQVISEKLILL 341 >UniRef50_B8L6A8 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6A8_9GAMM Length = 322 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 115/318 (36%), Positives = 168/318 (52%), Gaps = 10/318 (3%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + + L A+ W L + S + A+WQ W++ D + AWQ+ E L Sbjct: 5 TAAASALPPRVLEQAADWMMRLHEDD-SAARRAQWQHWHDADPAHARAWQRAERLLALTA 63 Query: 62 GVPGDVASRALHDT-RLTRRHVMKGLLLLLGA-GGGWQLWQSETGEGLRADYRTAKGTVS 119 VP +A R L RR V++G+ LL A GGW W+ A RTA G S Sbjct: 64 QVPTALAQRTLQPPASAGRRAVLRGVAALLVAPLGGWLAWRLWDDAAWDASARTAMGERS 123 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA--LQRPFRVLTRQGQL 177 +Q L+DGS+L L+T +A D+ FDAH R +RL +G++ + TA D RPFRV T G L Sbjct: 124 QQVLDDGSVLHLDTSTAVDIAFDAHARLLRLRHGQMLVETAADPQRPARPFRVATPYGTL 183 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT F+VR L VQ AV + P Q+R V+AG+ L+++ + KP Sbjct: 184 QALGTRFSVRLFAEDALLVVQHGAVRIST---PGQQRQVDAGQQLRWNLTRLPPPKPAPP 240 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W + +L PL +V+ L RY++ LR DP VAGL +SG FPL + L+++A Sbjct: 241 GADAWVRGMLVADAMPLQQVLQELGRYQHRWLRVDPRVAGLPVSGAFPLDDLQRSLSMLA 300 Query: 298 QTLPVKIQSITRYWINIS 315 T ++I+ WI++S Sbjct: 301 ATHALRIEQ--GLWIHVS 316 >UniRef50_Q3SUW8 FecR protein n=3 Tax=Rhizobiales RepID=Q3SUW8_NITWN Length = 337 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 67/321 (20%), Positives = 117/321 (36%), Gaps = 15/321 (4%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 + A W A + ++ ++Q+W + + ++ +E + Sbjct: 18 PDPIVDEALEWLARRQNAPLELAEQRQFQEWLLRSPRHGEEFRYLEAMWRSPELGKAAEG 77 Query: 69 SRALHDTRLTRRHVMKGL-----------LLLLGAGGGWQLWQSETGE-GLRADYRTAKG 116 A + RR ++ WQ +ADY TA G Sbjct: 78 LPAAARGSVNRRRLLSAARYVQSWSLRGVAAAAILMIAIGAWQYPALMLRWQADYITATG 137 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 ++ L DGS + LNT SA + F +R V L GE D PFRV G+ Sbjct: 138 GRAQVSLPDGSTMLLNTASAVSIDFTNGRRQVTLLEGEAFFDVRHDPAH-PFRVAAHYGE 196 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 GT F VR + + + +++ VEV S ++ GE + +A V D Sbjct: 197 TEVKGTAFAVRTESDQDTIVLERGRVEVSRLSDSGDHVELDPGEMVTATAKALSVVARRD 256 Query: 237 DEST-SWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILN 294 +W + F ++ L V+ L RY +G++ D V L ++G + L + + Sbjct: 257 PSEILAWRDGRIIFENQRLAHVLDELRRYYDGIVIVADARVGDLVVTGNYRLDDVPGAIR 316 Query: 295 VIAQTLPVKIQSITRYWINIS 315 +A + + I + Sbjct: 317 TLADAAGATMNRLPGGIILLR 337 >UniRef50_B7UW19 Probable transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=B7UW19_PSEA8 Length = 327 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 7/314 (2%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 ++ A++W++ S A + W D ++ A + +E L + G+P Sbjct: 13 DETEEDIDHRAAYWFSRRRSGHFSAACRAELEDWLRADPRHREALEGMERLWREFDGLPR 72 Query: 66 DVASRALHDTRLTR--RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 R R + + W+ ++ A Y TA G L Sbjct: 73 PALDDIPEPVPAWRLPRALAAAFFVFCALLVATLFWRDQSLGPNLA-YGTAPGEQREVVL 131 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS L L+ + VR+ R V L GE+ + D RPFRV + ++T LGT+ Sbjct: 132 ADGSKLFLDVDTQVQVRYAERTRDVLLKKGEVFFVVSHDP-ARPFRVGSGDSRVTVLGTQ 190 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS--ASEFGAVKPLDDESTS 241 F+VR+ + V+Q V + + + ++ AG+S + ++ S Sbjct: 191 FSVRRNAQALAVAVKQGRVALQPSLEKDAEHVLLAGDSARLDLADQRLELGHVAPEQVAS 250 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W L F DKPLGE++ L+RYR +R DP +AG R+SGT + D L + L Sbjct: 251 WRDGQLVFRDKPLGELVEELSRYRAAPIRLGDPRLAGKRVSGTVRIARPDDFLLALPALL 310 Query: 301 PVKIQSITRYWINI 314 PV++Q + I Sbjct: 311 PVRVQPQAGGEVLI 324 >UniRef50_Q6FBE6 Membrane bound regulator in multi-component regulatory system with cytoplasmic FecI (Sigma factor) and FecA (Outer membrane receptor) n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FBE6_ACIAD Length = 313 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 5/310 (1%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + R Q L A W + + ++ + ++QW + Q +Q WQQ L + +P Sbjct: 5 NERHQILEEAVEWLMQMKQKPLNEIELLEFEQWKNRSQLHQSIWQQAYQLEEKFQSLPSH 64 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 +A + + H L++L L+ + ADYR +L DG Sbjct: 65 IAIPIIQKQKS---HPDIWLMVLSCLPLLGLLYVMNQQQQWTADYRNGFHAPQTVKLPDG 121 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 + LN+ +A DV++ A +R + L GEI I T D RPF V T+QGQ ALGT++ V Sbjct: 122 GKIILNSNTAIDVKYTAKKRDIILRKGEIWIETQHDVKNRPFTVYTQQGQAQALGTKYLV 181 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 + +Q+ V + AV+V + Q I+ G+ + + +V+ D WTK + Sbjct: 182 KIDQKSSQIAVLKGAVKVQPKT-NNQYVIITKGQKISINQYNLHSVEYFDHSEIGWTKGL 240 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 + ++ PL E + L Y++ ++ DP V+ +++SGTFP+ N + ++ T + + Sbjct: 241 IMVNEIPLSEFVQKLRPYQSALIYLDPEVSNIKISGTFPIANMAQLYEMLENTYAIDVDR 300 Query: 307 IT-RYWINIS 315 + I I Sbjct: 301 YAMNHIIRIR 310 >UniRef50_C5BRF0 Transmembrane sensor n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRF0_TERTT Length = 345 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 31/343 (9%) Query: 1 MNPLLT-DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 MN + SR + A+ W + + +S + ++W Q Q ++ ++ + ++ + Sbjct: 1 MNQIRHFKSREHIEQEAAAWVIKIDQKPLSASERDELERWLAQSQAHRRSFLALADVWQE 60 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLW----QSETGEGLRADYRTAK 115 L G+ + + R +++ + L+ ++ + A+Y+TA Sbjct: 61 LDGLTSESEAVTQQAARPSQKQMPIVWSAAAAVLLAIALFTFHLRTANVPDIHAEYQTAT 120 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G + + L DGS + LNT+S V F AH+R + L GE AKD +RPF V T +G Sbjct: 121 GEIEQYLLPDGSRIKLNTRSNVVVDFSAHERAIHLQEGEANFEVAKDP-KRPFVVYTNRG 179 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS---------------------APAQKR 214 +TA+GT F VR Q + L V + V+V AS + Q Sbjct: 180 SITAVGTAFNVRVQSSGIDLVVTEGKVKVDAASSVLEPVRYDDKPSTRTELPDRSAQQIV 239 Query: 215 IVNAGESLQF---SASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC 271 V+AGE L+F + + D SW + +L+F PL E + ++RY + + Sbjct: 240 AVSAGEKLRFGNTTQHHTNPSQQEIDRQLSWQQGMLAFDSTPLAEAVREISRYTDTHIII 299 Query: 272 -DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWIN 313 DPA+A L + G F DA+L V+ + + + + Sbjct: 300 EDPALAELPVGGYFKAGEVDAMLEVLELSFNLSAEHQGNRILL 342 >UniRef50_Q3SUQ1 FecR protein n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SUQ1_NITWN Length = 330 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 11/308 (3%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 + R A W+A++ ++V+ + ++ W +D+ ++ A+ +E L + +P + Sbjct: 28 DKISREAVAWFAIMHADQVAKSDQLAFRAWLRRDERHRVAYADIERLWSGASELPVVKSR 87 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 R +TRR G+L + GGGW +Q ADYRT+ G +L D S + Sbjct: 88 RREKRIAVTRRTFGAGMLAAMAGGGGWVAYQQHP----FADYRTSAGERRTVRLADDSSV 143 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ- 188 + +A V F + R V L GE + A D RPF V G+ A GT F V Sbjct: 144 DMAGATALSVDFSSKLRLVTLHRGEAYFSVAPD-TSRPFVVEAAAGRTMAAGTAFNVDYV 202 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE-STSWTKDIL 247 D+ ++ V QHAV++ +A A+ ++AG L + G + +D W L Sbjct: 203 SDDDVRVTVAQHAVDIRVA---AEGARLDAGSQLTYGRESIGPPQAIDPASELGWRDGRL 259 Query: 248 SFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 F +P G V+A+L R+R G L + A+A ++ L+ + IL + TLP+++ + Sbjct: 260 IFISQPFGRVVASLNRWRQGRLMVMESALAVRPVTLIVDLQKSGNILATLEDTLPIRVVN 319 Query: 307 ITRYWINI 314 +T Y + Sbjct: 320 VTPYLTLL 327 >UniRef50_B6YYD9 FecR protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYD9_9RHOB Length = 333 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 125/311 (40%), Gaps = 10/311 (3%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ------LGG 62 A +W+ L + S +Q ++ W+ + +Q + ++E + +G Sbjct: 21 PDPIADEALNWFLKLQEDT-SDEQRKQFSAWFNTSEQHQQEFARLEEIWGASAFRKAVGE 79 Query: 63 VPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 + A T + + A S+ L+ADY T + + Sbjct: 80 LKTVSAHPPATKTHPQKTFRKLTGVAAAFALMIGATQFSDWWIYLQADYTTQSAEMRQIS 139 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 L DGS + +N+++A + F+ QR V + GE DA QRPF+V G++T LGT Sbjct: 140 LPDGSSMLMNSETAVALDFEGSQRHVHILRGEAYFDVLHDA-QRPFQVTGGFGEVTVLGT 198 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD-ESTS 241 F+V ++ +++ VE+ A+ R + GE + S K ++ E + Sbjct: 199 AFSVLASRTEDRVVLERGRVELTRANDAETARELKPGELSRISKIGIEESKKINPAEVLA 258 Query: 242 WTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W + L D PL + + + RY + + A+ +R+SG F N + +A Sbjct: 259 WREGRLVLEDVPLSKAVEEIERYYSSSIFITSSALRDIRVSGYFKTDNLIEAIETLALAT 318 Query: 301 PVKIQSITRYW 311 + + Sbjct: 319 GADLYQLPTGI 329 >UniRef50_B7X445 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X445_COMTE Length = 324 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 103/321 (32%), Positives = 154/321 (47%), Gaps = 18/321 (5%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL---- 60 ++ S A +A W L ++S +Q ++QW E ++ AWQQ++ L Sbjct: 1 MSPSLNPATEAAIEWLVCLHSGQMSQEQRRGFEQWLEAAPAHRAAWQQLQAPLQTLLQPL 60 Query: 61 --------GGVPGDVASRALHDTRLTRRHVMKGLLLLLG--AGGGWQLWQSETGEGLRAD 110 G + G +RA TR RR +++G L L G AG GW L + A Sbjct: 61 RSSGPEHVGQLLGQTLARAEAGTR-RRRQILRGALALGGISAGCGWLLDRQTPLAQWSAS 119 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP-FR 169 RT G L DGS +TL+ +SAAD+ FDA QR V L G + A P F Sbjct: 120 LRTDTGQRREFTLPDGSTVTLDARSAADLAFDAGQRRVILRLGALVARAAPQTPGGPAFV 179 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V T GQ+ ALGT F+VR F+ + + +H+V + A Q ++ G S +F Sbjct: 180 VQTMHGQIRALGTRFSVRLNPQFSSVGMLEHSVRITTAGGAQQ--VLAEGHSARFDTQGI 237 Query: 230 GAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 A +W + +L D PLGEV+ L YR G +R A L++ GT+ L++T Sbjct: 238 WADASAPSSMAAWQQGMLEAHDLPLGEVVQALRAYRRGWIRVSAHAAALQVYGTYSLEDT 297 Query: 290 DAILNVIAQTLPVKIQSITRY 310 D L +A+TLP++++S + Sbjct: 298 DRALAALAETLPIRLRSYSGG 318 >UniRef50_UPI0001AF4CF8 FecR protein superfamily protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF4CF8 Length = 346 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 63/329 (19%), Positives = 119/329 (36%), Gaps = 32/329 (9%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR---------- 57 +A+HW L + + + + QW + +Q + + Sbjct: 10 EHDAITDAAAHWCMRLHADDCTDAERKAFDQWLVAHPLHAVEYQAMNEVWYITGQIEPLN 69 Query: 58 -NQLGGVPGDVASRALHDTRLTRRHVM----------KGLLLLLGAGGGWQLWQSETGEG 106 + + A + + +R R+ + + G +Q W ++ E Sbjct: 70 PAPIASIGSAQAGQPVSRSRQHRKQRWTQRAAAAAVIALAVPVASYVGWYQGWLPDSYES 129 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 A T L DGS LN + ++R V L GE + D Sbjct: 130 YNASAAT-----RLVVLADGSRAELNLGTELTYANYRNRRAVTLKSGEAFFEVSHDTTH- 183 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEV-LLASAPAQKRIVNAGESLQFS 225 PF V QG + GT F V + ++ + + +V+V + PA ++ G + Sbjct: 184 PFVVDAGQGSIAVTGTRFNVWMYQDQVRVTLVEGSVQVNSDRTHPASSHHLDPGMQASYK 243 Query: 226 ASEFGAV---KPLDDESTSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLS 281 A + + P D S +W L F+D PL + + + RY + +L D A +RL Sbjct: 244 AGDDTPLISQTPAQDASLAWRNGKLIFNDLPLSQALPLINRYLQTPILLADSATGAMRLG 303 Query: 282 GTFPLKNTDAILNVIAQTLPVKIQSITRY 310 G++ + +L+ + + LP+ + Sbjct: 304 GSYNTDDLSYLLSSLPKVLPLYVTRNQNG 332 >UniRef50_A1BAQ4 Putative FecR n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAQ4_PARDP Length = 316 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 13/321 (4%) Query: 1 MNPLLTD---SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR 57 MN +D A+ W L+ +V+ Q ++ W ++D ++ A+ + + Sbjct: 1 MNGQSSDGLRPGEDIEAEAAEWVIRLADPQVTDQARNAFRDWLDRDPAHRDAFDDAQRVW 60 Query: 58 NQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 +LG + A + R R ++ ++ L AG WQ + L+AD+ A G Sbjct: 61 QELGLI----AQGDANPGRRCGRGMLA--MVALAAGFALWFWQDDLRIRLQADHVAAVGE 114 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQG 175 L DGS + L++ SA V +D +R VRL G T A Q RPF V R Sbjct: 115 NLAVTLRDGSRVELSSGSALAVDYDGTRRLVRLLEGSAYFTAEPSARQQGRPFVVEARGI 174 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 ++TALGT+F+V QD + V +H+V V S A ++ G + A P Sbjct: 175 RITALGTQFSVDLQDGDVAVLVAEHSVRVEPVSGAAPPVVLAEGMGVDARPDAIPAPAPR 234 Query: 236 DDE-STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAIL 293 + + + +W L F D+PLGEV+ L RYR+G + +AG R+SG F + + Sbjct: 235 NVDFANAWRSGELVFDDRPLGEVVRELNRYRHGRIVLRGGDLAGRRVSGVFHTDDIGRAV 294 Query: 294 NVIAQTLPVKIQSITRYWINI 314 + IA L ++ S+ + Sbjct: 295 DRIAAELGLRRLSVPPLVTVL 315 >UniRef50_Q4KDP8 Sigma factor regulatory protein PupR n=2 Tax=Pseudomonas RepID=Q4KDP8_PSEF5 Length = 344 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 150/319 (47%), Gaps = 4/319 (1%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 N A W L +VS A W +W + ++ AWQ+ E L +L Sbjct: 21 NAEPQSIDIAMAEQAMQWQLDLQEPQVSAATLAAWHRWRQAHPLHEKAWQRAETLAQRLQ 80 Query: 62 GVPGD---VASRALHDTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGT 117 V +RA L RR +K L LLL G G W + + ADY T G Sbjct: 81 QVRSQGHSELARATLVPNLGRRRALKQLGLLLVTGAGAWAARDTALVQDWSADYSTRVGQ 140 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 R L D + + LNT +A +RFD QR ++L GE+ +T A+ V T +G + Sbjct: 141 QRRITLADQTRVQLNTDTAIALRFDREQRRIKLLRGELLLTLARQDSLPALHVETAEGWI 200 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 F+VRQ T+L V Q + + + AGE +F+ + + Sbjct: 201 ETSTARFSVRQLAGRTELSVYQGNLTLRPRDGGQPALSLGAGEQARFNRQGLLLRQAQNA 260 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +W++ +L + L + + L RYR+G L CDP++A L++SGTFPL +TD +L +A Sbjct: 261 TQPAWSQGMLVAQGQALAQFLEELGRYRHGHLGCDPSLAQLKVSGTFPLADTDRVLFAVA 320 Query: 298 QTLPVKIQSITRYWINISP 316 +TL ++++ TRYW+ + P Sbjct: 321 RTLQLEVRQFTRYWVTLKP 339 >UniRef50_C1DIF1 Anti-sigma factor protein, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DIF1_AZOVD Length = 335 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 87/334 (26%), Positives = 140/334 (41%), Gaps = 27/334 (8%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + L A W +L P++ A + W E + ++ AW++ E + +L V Sbjct: 1 MTDTRNDNLLEQALEWCVLLQDPNAGPEERAGFAAWLETSEAHRQAWRRAEEVWRRLDPV 60 Query: 64 PGDVA-------------------SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG 104 +A R+ L + G W+ + Sbjct: 61 AERLASGAGPSPDRLAATPAVAPVRPQALKPAFRRKTRALRALAAMLLLGAILGWRYDP- 119 Query: 105 EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL 164 ADYRTA +LEDGSL+ L SA DV + +R +RL GE A D Sbjct: 120 -AWLADYRTAVAEQREWRLEDGSLIRLAPDSALDVDYGTARRRIRLHRGEAWFRVAADP- 177 Query: 165 QRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF 224 RPF V + G ALGT F +R++ + ++ V +H V+V L Q++ + G++L + Sbjct: 178 ARPFVVESATGHTQALGTAFDIRRRGDRVRVLVSEHQVQVSL---DRQRQRLEPGQALTY 234 Query: 225 SASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSG 282 A F V+ +D +W L F D PL +V+A L RY G L+ D A+ L ++ Sbjct: 235 DADGFSPVRNVDVANELAWQNQRLVFQDAPLAQVLAELQRYMPGRLQLTDSALGSLSVTA 294 Query: 283 TFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 F + L +A L +++ I + + P Sbjct: 295 VFDTRQPRQALESLADVLALRLTRIGPWLTLVRP 328 >UniRef50_B2Q6M2 Putative uncharacterized protein n=2 Tax=Providencia RepID=B2Q6M2_PROST Length = 328 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 117/323 (36%), Gaps = 11/323 (3%) Query: 1 MNPLLTDSRR---QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR 57 M A+ W+ +++S +Q ++ W ++ A++ + + Sbjct: 1 MTRTTHSEPDTLDSIDEQAALWFTRKHSQQMSAEQAKQFDIWLHASPEHAKAYEAIAGVW 60 Query: 58 NQLGGVPGDVASRALHDTR---LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTA 114 + +P + + R + L L A + + A Sbjct: 61 REFDSMPRPASIELPPKKQLFFRLWRPLGNTLAALFIAAILFLPYSQLPSMLFNNMTLVA 120 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 L DGS L LN Q+ V ++ R + L G + RPF +L + Sbjct: 121 TNMPKEVTLSDGSALFLNRQTRVRVAYETEVRRIYLDEGNAYFKVKSNPY-RPFVILADE 179 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV-- 232 ++ +GTEF V + + V + V + + AG+S SA Sbjct: 180 RRIQVIGTEFEVDRHQQQVAVRVSKGIVSLKTGQ-EQATTYLFAGDSATSSAINSPVKMN 238 Query: 233 KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDA 291 K + W LSF+DKPL EV++ L Y + P++A ++SG L+ ++ Sbjct: 239 KIAPLDVARWRFGELSFTDKPLAEVLSELNAYSPVNIELSPPSLAQSKISGRINLRQPES 298 Query: 292 ILNVIAQTLPVKIQSITRYWINI 314 + LPV++ + I I Sbjct: 299 FFQALPMLLPVQVVYQDKNNILI 321 >UniRef50_Q82VI9 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82VI9_NITEU Length = 343 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 25/336 (7%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEAR--WQQWYEQDQDNQWAWQQVENLRNQL 60 P A+ W L+ + +++A+ ++ W +Q + A ++ + ++ Sbjct: 2 PEKQPIPDDIAEQAADWIVRLTAGDATEREQAQSGFEVWKKQHPLHAEAAASLQQVIGRV 61 Query: 61 GGVPGDV--------------ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG 106 V + R R+ V ++ WQL Q Sbjct: 62 NEVRATTHGNPEPAHAALKAALAEGNRSRRRFRKTVATLVVACALLLPAWQLLQIYPPAY 121 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 L AD RT G L DG+ +TLN+ SA ++ FD +R + L GEI + A+D R Sbjct: 122 LMADLRTTTGQWQTHDLPDGTRITLNSISAVNLHFDIERRILELIKGEILVDVAQD-TDR 180 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL----ASAPAQKRIVNAGESL 222 PF + T +G + ALGT F V + + T L + + V V A + +V AGE + Sbjct: 181 PFLIETAEGSIQALGTRFVVDRHEQTTTLTMLESKVSVQTAEQRAEHSHESTLVQAGERI 240 Query: 223 QFSASEFGAVKPLDDEST--SWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLR 279 +A A++ +D + +W L ++PL EV+ L R+R G + D + G+ Sbjct: 241 HITAQGVSAIETIDTRTISDAWQYRHLVVQNRPLTEVLDELNRHRRGHILYDRAQLQGID 300 Query: 280 LSGTFPLKNTDAILNVIAQTLP-VKIQSITRYWINI 314 ++ PL +TD L ++ +LP ++I+++T Y + + Sbjct: 301 MAVVLPLDDTDRALQLLVDSLPMIRIRTLTPYLVLV 336 >UniRef50_A7IJ25 Anti-FecI sigma factor, FecR n=3 Tax=Alphaproteobacteria RepID=A7IJ25_XANP2 Length = 320 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 139/313 (44%), Gaps = 10/313 (3%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD-- 66 R A +A W+ + +P + A +QQW DN+ + +E L L V Sbjct: 12 RPTARDAALGWFVKMRSGEATPAEVADFQQWIAAAADNRREYDALEALWGDLDQVGDPRR 71 Query: 67 -VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 AS ++RR + G + A RT G + L D Sbjct: 72 VAASVPASRPMMSRRGLFLGAAGVAAAVVAGVALGVPDWFDGA--IRTGVGEQRQLTLAD 129 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 GS + L+ SA ++F R + L G A D R F V G TA GT+F+ Sbjct: 130 GSRVVLDADSALSLQFTPQARRLTLQRGRAFFDVAPDP-ARAFSVTAAGGVTTATGTQFS 188 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV-KPLDDESTSWTK 244 V N + V + AV + + A + AGE++ + AS G + D ++++W + Sbjct: 189 VHLWSNEVTVAVSESAVSIR--AGAAALSRLKAGEAVSYDASGIGETEQVSDAQASAWRR 246 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L F D+PL +VIA + RYR G + D + LR+SG F ++ D +L I ++LPV+ Sbjct: 247 GKLIFEDRPLRQVIADVNRYRPGTIMVTDSTLLRLRVSGIFDIRQPDGVLEAITRSLPVR 306 Query: 304 IQSITRYWINISP 316 ++TRY + + P Sbjct: 307 SMALTRYLVLLYP 319 >UniRef50_Q7W4H6 Putative inner membrane sensor for iron transport n=3 Tax=Bordetella RepID=Q7W4H6_BORPA Length = 323 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 72/326 (22%), Positives = 116/326 (35%), Gaps = 17/326 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M + A W + S Q A Q W E D + ++ V ++ Sbjct: 1 MAVPPSKQDDLLTEQAVQWCVRIHDASCSEQDRAALQAWLEADPRHAREYEAVRDIWTLA 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMK------GLLLLLGAGGGWQLWQSETGEGLRADYRTA 114 +P A R + L L A G W + +D R A Sbjct: 61 QDLPAHEAPAKACAPRRRPYPAARRALGACALGLACWAAGWWFAVLPSSYHRYASDARVA 120 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 L DG+ + +N +A R R VRL GE DA PF V Sbjct: 121 T-----VTLGDGTEVDMNIDTAMVYRNYRDARRVRLSDGEAYFRVFHDASH-PFVVEAGA 174 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G +T GT F V + + + + + V++ ASA + + +++ + Sbjct: 175 GTITVTGTAFNVWKSGDNVVVTLVEGRVDLR-ASATGKTVSLQPLTQARYAGRGEPVTRA 233 Query: 235 LD-DESTSWTKDILSFSDKPLGEVIATLTRYRN---GVLRCDPAVAGLRLSGTFPLKNTD 290 +D +S +W L + L + I + RY DPA+AGLRL GT+ ++N Sbjct: 234 VDGAQSAAWRHGKLVLDNTTLRDAIMQINRYLPAEARYTTVDPAIAGLRLGGTYDVRNVG 293 Query: 291 AILNVIAQTLPVKIQSITRYWINISP 316 + + LPV+ + + P Sbjct: 294 ELARALPDILPVRTVRKADGSLALVP 319 >UniRef50_Q2KXL7 Regulator of iron dicitrate transport (Fragment) n=3 Tax=Betaproteobacteria RepID=Q2KXL7_BORA1 Length = 318 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 102/313 (32%), Positives = 158/313 (50%), Gaps = 8/313 (2%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 + A W L+ P A +++W D++ AW +V+ + +P +A Sbjct: 8 PASVVDEAIAWSVKLNFSSPDPGTCAAFERWRRAAPDHEQAWTRVQTVNADFSALPQGLA 67 Query: 69 SRAL-HDTRLTRRHVMKGLLLLLGAGG-GWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 L TR RR V+K L L G GW + + + AD T G R L DG Sbjct: 68 LDTLTATTRRRRRAVLKSLAALGGLASTGWVIREHAPWQA--ADVSTGVGQRDRLTLADG 125 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLTRQGQLTALGTE 183 +LL LNT SA +R + +R + L+ GEI+I T DA RPF V T G ALGT Sbjct: 126 TLLMLNTDSAVGLRMEGAERVLVLYRGEISIQTGADAASPVKRPFFVRTPFGTAQALGTR 185 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWT 243 F VR + + ++ VQ+ AV + AS A + I AG++ + + ++ S +W Sbjct: 186 FVVRLAEAYARISVQEDAVALRPASG-ADRMIAQAGQTWRLDSQRALPMQTPAITSDAWL 244 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 + D LG+++A L RYR G + C P VA L++SGT+ + ++D L +A+TLP++ Sbjct: 245 AGAIEGQDMRLGDLLAELARYRPGRISCAPEVADLKVSGTYHVDDSDRTLAFLARTLPIR 304 Query: 304 IQSITRYWINISP 316 ++ TRYW+ + P Sbjct: 305 LRYWTRYWVAVGP 317 >UniRef50_B7S234 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S234_9GAMM Length = 322 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 77/320 (24%), Positives = 131/320 (40%), Gaps = 9/320 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN Q +A +W A L + VS + W + ++ A + + L + L Sbjct: 1 MNEETNKQYEQVCEAALNWVACLRSDAVSEGDRQAFALWLGKHNSHRRAMDEAQALWDDL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 V + + R + ++ LW + + YR+A G Sbjct: 61 AVVRHIPVN--IDKAANRSRWLATAMVAAACLVLAVFLWPQLPSDPVSTQYRSAMGERRT 118 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS++ LNT S V + QR V L GE+ + + QRPF V + ++TA+ Sbjct: 119 VDLPDGSVIHLNTNSTISVTYTDDQRHVDLERGEVWFQVSPNK-QRPFHVDAGEARITAV 177 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKR----IVNAGESLQFSASEFGAVKPLD 236 GT F + DN T + V + VEV ++ ++ + L + D Sbjct: 178 GTAFNIYLDDNSTDVTVTEGVVEVSDIGQTGRRLHAAELLLENQRLITGIDGWELSSSDD 237 Query: 237 DE-STSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 +W + L + PL +I L RY + ++ DP VA L +SG L +A L+ Sbjct: 238 VSKQMAWQRGELVAEEMPLPALIEQLERYQQTRIIIADPNVAALTVSGVLQLDQPEASLS 297 Query: 295 VIAQTLPVKIQSITRYWINI 314 IA +L ++I ++ + + Sbjct: 298 AIAVSLDLQITPLSDTSVLL 317 >UniRef50_C1DGE4 Anti-sigma factor protein, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGE4_AZOVD Length = 317 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 12/321 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ- 59 M P +A W A+ R+S + R++ W +++ ++ AW++++ + Sbjct: 1 MKPPRLSPEES---AAIEWLALQRSGRMSDTERRRFEGWLAENERHRGAWERLQRRLDSA 57 Query: 60 ---LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQL--WQSETGEGLRADYRTA 114 + G P D+A + L +RR ++G L L G G G +GL AD TA Sbjct: 58 FAGIAGQPADLAQKTLLSAGSSRRQALRGALALAGLGLGGLGLTRPGMPLDGLVADLSTA 117 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G R L DGS + LN QS D+ +D QR + L G + DA RPF V T Sbjct: 118 TGERRRFALADGSSVLLNAQSRVDIDYDGQQRRLYLRRGALLAEVTADAR-RPFVVETPF 176 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G++ ALGT F++ + T + VQ+ +V L S ++ AGE + ++ Sbjct: 177 GRVRALGTRFSIALGERETTVWVQE--AQVRLESRSGDSLVLAAGEGARLDPDGCQRLEA 234 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 +W L D+PL +IA L Y G LR A LR+SG FPL +++ +L Sbjct: 235 QRRSEFAWQDGWLELHDRPLETLIAALRPYHRGHLRLSRDAADLRISGLFPLDDSEQVLA 294 Query: 295 VIAQTLPVKIQSITRYWINIS 315 + + LP++I +W NI Sbjct: 295 SLEEILPLRIHRYLGWWTNIE 315 >UniRef50_Q82WX3 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82WX3_NITEU Length = 308 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 94/319 (29%), Positives = 144/319 (45%), Gaps = 20/319 (6%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + A+ W LS ++S Q+A ++ W QD ++ A++Q+ L + Sbjct: 1 MSEVTDHHTVSLSEQAAEWVVRLSDSQISTAQQADFEAWLAQDIRHREAYEQISRLWQSV 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 R R + ++L+ G AD RTA G + + Sbjct: 61 ----------TPQRRRKHRPAGLLASIVLVLIGIYCL-----PLSTWLADERTATGEIRQ 105 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL-----QRPFRVLTRQG 175 L DGS +TL++ SAADV FD H R + L G I DA RPF + R G Sbjct: 106 VALPDGSTITLDSDSAADVVFDTHARRIILHRGRIFAAVVPDAAEQGAHHRPFIIENRDG 165 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 ALGT + V Q + +++ V + +V V P Q V +G+S++F + + +P+ Sbjct: 166 TAQALGTRYIVEQTGDHSRVSVVESSVNVTSRDRPDQSITVYSGQSIRFDSEQIHGQEPI 225 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + SW + L + + PL +VI L RYR G LR A A LR +G P + D L + Sbjct: 226 PPAAASWVQSRLVYRNAPLSQVIDDLARYRTGFLRISGAAAQLRFTGVLPADDPDTALKI 285 Query: 296 IAQTLPVKIQSITRYWINI 314 + LP+ I TR I I Sbjct: 286 LQHALPIGIDRYTRVLIWI 304 >UniRef50_Q92NX5 Putative iron transport regulator transmembrane protein n=1 Tax=Sinorhizobium meliloti RepID=Q92NX5_RHIME Length = 354 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 126/314 (40%), Gaps = 9/314 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M P D+ + + A+ W + P+ +++W +D++ W++ L + Sbjct: 35 MTP--DDNAAELSKEATDWLIRIREAPDDPEMRLHFERWVTTSRDHRREWEKTCRLWLSV 92 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGG--GWQLWQSETGEGLRADYRTAKGTV 118 G +P + H+ + RR L + A W L++DY T Sbjct: 93 GALPAARDKPSAHNFKPGRRGGRASLAIAACAMAICLLVAWVPGLLIVLQSDYHTGTAET 152 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +LEDGS +TL SA + F +R++RL GE A D RPF V ++ Sbjct: 153 RSLELEDGSTVTLAPGSAIAMDFGQSRRSLRLLQGEAYFDVAHDP-ARPFVVDAGGLEIE 211 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA-QKRIVNAGESLQF--SASEFGAVKPL 235 LGT F V T++ +++ V + A +R + G++L F A + Sbjct: 212 VLGTAFDVMVDSESTRVSLERGLVTASPSGKEASAERRLTPGKALVFDRDAQDMTTSDID 271 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILN 294 +W + L + + V+ + RY + DP + R++G + L D L Sbjct: 272 AASIGAWRQGRLHVVNATISSVVERIQRYHPAWISLPDPVLGSQRVTGIYDLTAPDEALG 331 Query: 295 VIAQTLPVKIQSIT 308 + K++ I+ Sbjct: 332 ALVDPYGGKVRRIS 345 >UniRef50_B6IXY0 Sigma factor regulatory protein, FecR n=1 Tax=Rhodospirillum centenum SW RepID=B6IXY0_RHOCS Length = 331 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 18/331 (5%) Query: 1 MNPLLTDSR-RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL--- 56 M+P + A+ W A L ER + ++ + W QD ++ A++++ L Sbjct: 1 MSPTPAARPTPAMVAQAAQWAATLDDERATQEEHDACEAWCRQDPLHRLAFERMRRLDRR 60 Query: 57 RNQLGGVPGDVASRALHDTRLT---------RRHVMKGLLLLLGAGGGWQLWQSETGEGL 107 QL + V A + RR + G+ LL G GW L Sbjct: 61 FEQLSELDRQVLRVAADRPGRSAVGRSAGAVRRGALLGICLLF--GLGWLAAGLPQVRAL 118 Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP 167 D RT +G +L DGS LT++T +A D+R A R + L+ G I A D RP Sbjct: 119 FPDERTERGERRDMRLADGSGLTIDTDTALDIRLSAGMRRIELFGGRILAEVAHDPE-RP 177 Query: 168 FRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS 227 F V T G +TALGT F+VR+ T + V V A+ A + GE Q + Sbjct: 178 FTVATADGTVTALGTAFSVRRDGGRTLVTVVASRVRACPATTGAACLELGPGEQAQLAGG 237 Query: 228 EFGAVKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLRLSGTFP 285 + P+D +T+WT+ L D+PL V+ L RYR +R + + GLR++G+ P Sbjct: 238 SATRLAPVDPAGATAWTRGWLVIDDQPLTAVLEELNRYRAVPVRFEARTLQGLRVTGSLP 297 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINISP 316 L N+ L+ +A L +++ + P Sbjct: 298 LDNSGRALDALAGMLGLRLLRPDAGGPVVLP 328 >UniRef50_Q4KBG4 Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Pseudomonas fluorescens RepID=Q4KBG4_PSEF5 Length = 325 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 118/325 (36%), Positives = 169/325 (52%), Gaps = 11/325 (3%) Query: 1 MNPLLT-DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M+P L+ A+HWY L + S +Q +WQ W+EQ +++ AW VE + + Sbjct: 1 MDPRPGGRLSHACLQQAAHWYVQLQDQGSSDEQRRQWQDWFEQSAEHRQAWSYVERVSQR 60 Query: 60 LGGVP-------GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQ-SETGEGLRADY 111 L + A A L RR V+ LLL G W+ + RADY Sbjct: 61 LLPLQEANTRPSASRALSAARHPVLARRQVLGALLLAGLGWGTWRNSPLPQALSRWRADY 120 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 T G V L DG+ L LN SA DVR+ QR + L GEI I TAKD RPF V Sbjct: 121 ATGTGEVRDTLLSDGTRLWLNALSAVDVRYSTEQRLLALHLGEILIDTAKDPR-RPFLVQ 179 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 T G+L ALGT F+VR + + L+V AVEV AS Q ++VNAG+ L+F G Sbjct: 180 TEHGRLRALGTRFSVRCGASDSLLNVYAGAVEVRSASG-LQVQVVNAGQQLRFDGRTLGP 238 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 ++ +W+ +L + PL +++ L RYRNG L CDPA+A L + G+FPL ++D Sbjct: 239 LQAASAAREAWSHGLLLADNLPLEQLLEELGRYRNGHLGCDPAIAQLPVMGSFPLHDSDQ 298 Query: 292 ILNVIAQTLPVKIQSITRYWINISP 316 L ++ LPV+++ + +W+ + P Sbjct: 299 ALALLEAALPVRVKRLASWWVTLEP 323 >UniRef50_Q3SR62 FecR protein n=3 Tax=Bradyrhizobiaceae RepID=Q3SR62_NITWN Length = 377 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 89/318 (27%), Positives = 130/318 (40%), Gaps = 15/318 (4%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 + A W+ +L E + + + W DQ ++ AWQ VE + L + +V Sbjct: 7 QSVDDQAVQWFVLLRDEDATAEDRRAFAHWLAFDQTHETAWQSVERMWGGLDALAPEVVR 66 Query: 70 RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 + R +R +K + + GL ADYRTA G L+DGS + Sbjct: 67 QRRKPRRNSR---LKRGAAVALLLAAIGIGWQMAPTGLFADYRTAIGERRMIVLQDGSQV 123 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 L SA DV F +R VRL GE T KDA RPF V G++ LGT F V+ Sbjct: 124 DLGAASALDVSFGTGERRVRLLTGEAFFTVTKDA-ARPFIVAAENGEVKVLGTAFDVKIA 182 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKR---------IVNAGESLQFSASEFGAVKPLDDEST 240 D AS A R +V G+ +++ + AV D ES Sbjct: 183 DGVAVAVAHNAVQVSAQASTQAPDRPDVVPDAPVVVRQGQIVRYDFAGISAVGAADLESI 242 Query: 241 -SWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 +W L F D PL V+ L RYR ++ + R++ F T+ L+ IA+ Sbjct: 243 QAWRHGQLVFRDVPLDTVLTELQRYRFGRIVLIGGTLGQRRVTAVFDAAKTEQALDTIAE 302 Query: 299 TLPVKIQSITRYWINISP 316 +L ++I I P Sbjct: 303 SLSLRIYRAAGLLTVIIP 320 >UniRef50_A6SZL6 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZL6_JANMA Length = 299 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 13/297 (4%) Query: 28 VSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV--------PGDVASRALHDTRLTR 79 ++ + ++QW D ++ AW +V L N+ V PG V + R Sbjct: 1 MTDSERRAFEQWRAADPSHELAWNRVAGLLNESLSVVRDAGLRAPGQVQAAQRALLNTRR 60 Query: 80 RHVMKGLLLLLGAG--GGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAA 137 R +++G L+ G G + L AD +T G L DGS + LN +SA Sbjct: 61 RKLLRGALVFAGVGTTSVLLAERQIAVGQLWADLQTGTGQRQTFALADGSSVQLNARSAV 120 Query: 138 DVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDV 197 D+ F+ +R +RL GE+ + A DA RPF V T G + ALGT F V QQD +Q+ V Sbjct: 121 DIDFNQDRRQLRLRAGELIASVAPDAG-RPFLVQTTHGIIRALGTRFLVSQQDRQSQVVV 179 Query: 198 QQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEV 257 +H+VE+ Q + GE F S+ + +W+ +L+ + L EV Sbjct: 180 LEHSVELRTRD--GQHMRLREGEGATFDHSQIERIAGNASAHAAWSDGMLAVENATLAEV 237 Query: 258 IATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 +A L Y +G +R P A LR G FPL++ +L +A TLP+K+ + I+I Sbjct: 238 VAALKPYYSGYIRLSPEAASLRTFGVFPLEDPGHVLRTLAHTLPLKMHHYGNWLISI 294 >UniRef50_Q1LPC1 Putative FecR n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LPC1_RALME Length = 357 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 80/347 (23%), Positives = 135/347 (38%), Gaps = 36/347 (10%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 +A+ W++ +SP ++ + W +++ + +E + Sbjct: 9 ENPMSQSVDVREAAARWFSRNQAPALSPAEQQAFAAWLAASAEHRAEYAALERVWQAAAA 68 Query: 63 VPGDVASRAL----------------HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG 106 + D + R + GL L G GW WQ + Sbjct: 69 IDPDRLRKLAVDESACPTPPLSPPISRRVSAGWRPALLGLCAALAIGIGWIGWQHDAAVA 128 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 A+Y+TA G L+DGS + LNT+S ++ + A R V L GE + DA R Sbjct: 129 TNAEYQTAPGERRTLTLDDGSRIELNTRSRLEIHYSAGTRRVTLREGEAMFEVSHDA-AR 187 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA----------------SAP 210 PF V G +T GT F VR+ + + V+ +V+V + + Sbjct: 188 PFVVDAGMGTVTVTGTRFDVRRDTSGVDVSVESGSVDVRGSVRGSVRGSAKDSVKGNAGR 247 Query: 211 AQKRIVNAGESLQFSASE--FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGV 268 ++AG + ++ GA +W + L F+D PL V A ++RYR Sbjct: 248 TPDTRLSAGLGARIASDGTVTGAASIDLPGVLAWREGKLVFNDAPLSAVAAEVSRYRQQP 307 Query: 269 LRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 +R D A LR+S F +T +L + Q LPV ++++ I Sbjct: 308 VRVADAATGSLRVSSVFSADDTSGLLAALPQMLPVGVRNLPDGSTEI 354 >UniRef50_B8KN81 CytoChrome c oxidase Cbb3-type, subunit I n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KN81_9GAMM Length = 332 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 71/329 (21%), Positives = 133/329 (40%), Gaps = 16/329 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M R + A W A G SP +++W + ++ A +++ +L +L Sbjct: 1 MAEPAVHGRSDIDKEACAWIAQFDGGEPSPADLEAFREWVNRSPRHREAIERLSSLWGEL 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRAD--YRTAKGTV 118 + + R R + + +L L +AD Y TA G Sbjct: 61 NDLTLLAVPPPVKTRRAWRSLGLGAVAAVLVLAVAATLRLPFGEPASQADGVYATAVGEK 120 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 L DGS + LNT + V + +R + L GE A D QR F V + + Sbjct: 121 QTIVLPDGSTIQLNTATRLRVSYSPQRRELFLLAGEAFFDVAHDP-QRAFLVNAGERTVR 179 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLA----SAPAQKRIVNA---GESLQFSASEFGA 231 A+GT F++ + + ++ V + VE+ +A R++ G+ ++ + + Sbjct: 180 AVGTAFSIHRDSDVLEVLVTEGVVELSRGAEGTTAHDTSRVLGKVLRGQRVRLAREAEPS 239 Query: 232 VKPLDDE-----STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFP 285 + +W + +LSFS +PL V+ + RY N + D ++ LR+ G F Sbjct: 240 APEAVSDEELTRELAWRQGMLSFSGEPLAVVVDEIGRYTNTRIVIRDASIENLRIGGYFR 299 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINI 314 +TD +L+ + P++I + + + Sbjct: 300 AGDTDTMLDALEAGFPIEIHRLPDGTVQL 328 >UniRef50_Q2RRS2 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRS2_RHORT Length = 329 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 125/323 (38%), Gaps = 11/323 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M + +A W+ L ++ W + D + ++ +E L Sbjct: 10 MTTATYTHEDPVVDAALDWFTRLRAGTPDDATLRAFRAWRDGDPRHAREFRALEELWGAP 69 Query: 61 GGVPGDVASRALHDTRL------TRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTA 114 + A RR + L L W + RADY TA Sbjct: 70 TFAKAATLAGARPAAPARPSRAPWRRRLAFAASLALVLAAIW--RSPDAVVAWRADYLTA 127 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQ 174 G R L DGS + LNT SA + F +R + L GE DA PF V R Sbjct: 128 TGERERVTLPDGSTMILNTASAVALDFAKGERAITLLAGEAFFDVRHDADH-PFTVTGRF 186 Query: 175 GQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP 234 G++ GT F+V +D+ ++ +++ AV V A Q ++ GE++ +A+ V+ Sbjct: 187 GEVRVEGTAFSVEMKDDRDEIVLERGAVAVRCVGASGQAAALHPGEAVSVTATALSPVRR 246 Query: 235 LDDE-STSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTDAI 292 E +W + F ++PLG V+ L RY G + + A G +SG + L + Sbjct: 247 AAPEHDLAWRNGRIRFDERPLGAVVEDLRRYHKGPIFVLNDAAEGTVVSGNYRLDDIAGA 306 Query: 293 LNVIAQTLPVKIQSITRYWINIS 315 L +A ++ + + + Sbjct: 307 LRTLAAATGAEVIELPAGVVILR 329 >UniRef50_C6X944 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X944_METSD Length = 330 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 102/315 (32%), Positives = 144/315 (45%), Gaps = 10/315 (3%) Query: 3 PLLTDSRRQALRSASHWYAVL---SGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 + S + + A+ W L + +A Q W +Q + ++Q++ L Sbjct: 13 GMTQPSMAEIRQQAAEWLIQLSEAESDTQRAALQAACQAWQQQHPGHAEIFRQMQTLWQS 72 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 L D A RR + G L A Q T AD RT+ G + Sbjct: 73 L----ADHGDTAKPKRSKGRRKALIGTAL--SALLLLGGLQLPTTRYWLADERTSTGEIR 126 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 + L DGS +TLNT SA D+RFDAH RT+RL GE+ A D QRPF V R G TA Sbjct: 127 QISLSDGSRITLNTHSAVDIRFDAHTRTIRLTEGEVLAEVAHDPQQRPFIVENRDGTATA 186 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES 239 LGT + VRQ + + + V + V V A V AGE L+F A + + P + Sbjct: 187 LGTRYLVRQDADSSTVTVLESTVAVKPR-HSATISKVYAGEQLRFDAQQAYTLMPAPALA 245 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 SW L F D PL VIA L YR G+L+ R +G P ++D L+++ Q Sbjct: 246 DSWHMQRLVFEDAPLSAVIARLAEYRPGLLKLRTNTQAFRFTGVLPTDDSDKALSILQQA 305 Query: 300 LPVKIQSITRYWINI 314 LP++IQ + Y + + Sbjct: 306 LPIRIQRFSNYIVLV 320 >UniRef50_B0KIR3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIR3_PSEPG Length = 323 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 99/326 (30%), Positives = 146/326 (44%), Gaps = 14/326 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN L++A++WYA L Q + RWQ+W NQ AW V+ + + Sbjct: 1 MN-ASERPDHATLQAAANWYAQLLAAPQDLQLQLRWQKWLGTAHANQVAWDHVQRISQRF 59 Query: 61 GGV--PGDVASRALHDTRL----TRRHVMKGLLLLLGAGGGWQLWQSE----TGEGLRAD 110 + D + +AL R RR V LL G+ W+ + L AD Sbjct: 60 SPLKLQADASLQALGSVRRTDLDRRRAVGLLGLLCGGSLLALAGWRLPAARRQLQALSAD 119 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 RT G V +L DG L LN+ +A ++ + A+ R + L GE+ + TA D RPF + Sbjct: 120 QRTGTGEVRSLRLPDGGQLWLNSATALNIDYRANLRRLELLAGEVLVETAHD--SRPFVI 177 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 TR G+L ALGT F+V Q+D +L V AV + A +V AG F Sbjct: 178 DTRHGRLQALGTRFSVWQRDQAARLSVFDGAVRLHPADGAG-SLVVAAGWQADFDRHGAQ 236 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTD 290 + +D+ +W L +D L E L Y G L P V LR+ G FP + + Sbjct: 237 PPRAVDESRQAWRDGRLLANDISLSEFSEQLRAYLPGHLGVAPQVQALRVMGNFPANDPE 296 Query: 291 AILNVIAQTLPVKIQSITRYWINISP 316 L ++ LP+K++ +W +I P Sbjct: 297 RTLAMLESALPIKVRKTLPWWYSIEP 322 >UniRef50_A9CLD9 Transmembrane sensor n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CLD9_AGRT5 Length = 311 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 134/318 (42%), Gaps = 13/318 (4%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 +L ++ R A+ W ++ + + +W + ++ A+QQ L LG Sbjct: 1 MLDENFEALRREATAWIVRITSGTATTEDAEALLRWRSRSDAHEQAFQQSARLWKNLGSA 60 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQS----ETGEGLRADYRTAKGTVS 119 G+ R + +TRR + + GA G + + + + ADY T G Sbjct: 61 LGET--RKTSASTVTRRSFIAAGSVAAGAAGVGVVLSELGFLPSVDAMLADYATGVGEQR 118 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 +L DGS L+ + + + R + L G DA RPF V G TA Sbjct: 119 TVELVDGSTAILDGGTTLSLDYSPSSRHLVLTSGAAVFDVVHDA-ARPFVVTAANGDTTA 177 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DE 238 GT F+V+ + ++ + + V +N GE + +S + G D + Sbjct: 178 TGTSFSVKHGEEDVSIECLEGHITVQCLGDSQ----LNGGEGISYSRAGLGKKVAADIET 233 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W + +L F D+PL +V++ L R+R G V+ + R+SG F L D IL + Sbjct: 234 AAAWRRGLLIFEDRPLADVVSDLNRHRRGRVVIASSDLRSRRMSGVFHLNRPDEILAHLE 293 Query: 298 QTLPVKIQSITRYWINIS 315 +TL V+ S+ + + Sbjct: 294 ETLQVRPVSLVGGIVLLR 311 >UniRef50_C6XPM9 Anti-FecI sigma factor, FecR n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPM9_HIRBI Length = 349 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 79/338 (23%), Positives = 142/338 (42%), Gaps = 30/338 (8%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV--- 63 +R++ A+ W L + VS AR+ QW + N+ + ++ + L + Sbjct: 11 PTRQRREAQAAEWVTKLDADTVSAIDRARFDQWMSSSEKNRECYYRIAKAWSALDDLEEL 70 Query: 64 -----PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG-----LRADYRT 113 DVA + R +R+ V + G+ W + A T Sbjct: 71 QHLAESDDVAELLKQNRRQSRKIVQSIGAMAAMLIIGFSTWVALPYLNTQTYKYEAFIST 130 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 A G + QL DGSL+ NT + + + + R + L GE A A RPF V+ Sbjct: 131 AVGEMQNIQLPDGSLIKANTNTHLVIHYSKNSRDINLLRGEAFFEVAH-APDRPFSVVAG 189 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA------------SAPAQKRIVNAGES 221 Q+ A+GT F VR ++ + V++ V ++ +A + ++AG+ Sbjct: 190 DRQVRAVGTAFNVRLREAKLAVTVEEGRVALINKKAMLVQNKNPENNAAQELTQISAGQR 249 Query: 222 LQFSAS--EFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAG 277 F E ++ + SW ILSFS +PL +I+ ++RY N + D ++ Sbjct: 250 AVFDTDIEELEVLQAENLQRRLSWRNGILSFSGEPLSFMISEVSRYSNVEIEIADESLKD 309 Query: 278 LRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 + ++G F + DA+L V+ V I+ I + + ++ Sbjct: 310 MPVAGYFKVGEVDAMLEVLDLMSDVTIERIDQNKVRLT 347 >UniRef50_Q82WV2 Possible transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82WV2_NITEU Length = 309 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 69/306 (22%), Positives = 120/306 (39%), Gaps = 16/306 (5%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 A+ W+ + + ++ ++ W +++ ++ +QQ L L + Sbjct: 9 HPSEENALTEQAAAWFLRMQQSDTNDVEQKAFEAWLAENEAHRTEYQQYVQLWQTLDHLE 68 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 R R + ++ L TA G + L Sbjct: 69 --------QKPRKKSRSTVTWIVTLAILFSSLHW-----LTRHEEMITTAIGEHQQIILA 115 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DG+ + +NT S + R V L GE D R F V G L +GTEF Sbjct: 116 DGTTIDINTDSTLRLALYGFTRKVTLERGEALFRIG-DERLRSFEVHAGNGILRDIGTEF 174 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWT 243 V +++ + V + AVEV + R+++ GE L +SA + + D + T+W Sbjct: 175 NVIKEEGNVTVAVLEGAVEVGIDHQNDTVRLLHGGEQLTYSAYDLSEISSTDKETVTAWR 234 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 K L F + PL EVI + RY + +R DP + LR+SG F + ++ + LP+ Sbjct: 235 KSRLIFRETPLEEVIRQINRYHSRPVRLGDPQLNTLRVSGEFNSADRAGLVQALITLLPL 294 Query: 303 KIQSIT 308 + + Sbjct: 295 RASELD 300 >UniRef50_D2LKP6 Anti-FecI sigma factor, FecR n=2 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKP6_RHOVA Length = 326 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 88/328 (26%), Positives = 133/328 (40%), Gaps = 32/328 (9%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD--- 66 A W+ L + + R+ W + D + AW ++E L + L V Sbjct: 7 HSVEDDAVEWFV-LRDASATDEDRERFLAWRDADPVHARAWGEIERLWSNLDHVSPQSLG 65 Query: 67 ------------VASRALHDTRLTRRHV-----MKGLLLLLGAGGGWQLWQSETGEGLRA 109 + S + RR + + G L+L A W A Sbjct: 66 LRRPGRENVSLLMPSHTPPPHVVGRRALSFGSRVSGAALVLCALLIWAWMPHS-----FA 120 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 DYR+ G L+D S + L + +A DV F R VRL GE T AKDA RPF Sbjct: 121 DYRSGIGERRTVLLDDHSEIELGSATAIDVAFSPTHREVRLLEGEAFFTVAKDA-ARPFI 179 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V T QG++ GT F V+ + + V +H+V V A G+ ++F Sbjct: 180 VATAQGEIEVRGTAFNVKIT-DAVAVAVAEHSVSVTSAGGNTASV--QQGKMVRFDQKAV 236 Query: 230 GAVKPLDDEST-SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVA-GLRLSGTFPLK 287 D ++ +W +D L F D PL V+A L RYR G + AVA R++ F Sbjct: 237 SPASNADLDAIQAWRRDQLVFIDTPLEAVLADLRRYRVGRIDLLSAVAGQKRITAVFEKN 296 Query: 288 NTDAILNVIAQTLPVKIQSITRYWINIS 315 D L+ IA++L +++ T + + Sbjct: 297 RIDDALDTIAESLDLRVIRATSLFTALV 324 >UniRef50_C6X948 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X948_METSD Length = 348 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 14/323 (4%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 ++R +R A+ W +L+ S EA + W + D ++ A + +L V Sbjct: 11 PAETRSAVVRQAAEWLVLLASPEASAADEAAFNAWVQADPAHRNAVVTMRGFVGKLSAVA 70 Query: 65 GDVASRAL-------HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 D + RA+ + R+ + +LLL G WQL + AD T Sbjct: 71 SDTSQRAVLQQALHKPASGRGWRNAVAAMLLLGAMLGSWQLLN--PWSAMFADLSTETAE 128 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 + L D S L L + +A D+ F AH+R + L GEI + A D RPF V T G + Sbjct: 129 WKNEVLPDQSHLALASATAVDINFSAHERKLALLKGEILVDVAPDPE-RPFIVQTPHGTM 187 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 ALGT F V D+ T L + VE + Q RIV+AGE + SA +D Sbjct: 188 RALGTRFVVTLTDSGTTLTMLHSKVEAKTEAQD-QTRIVSAGEQVVLSAEHISTPVAIDT 246 Query: 238 E--STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILN 294 E + +W+ L D+P+ +V+ L RYR G++ + + +S PL +TD L Sbjct: 247 ESVAAAWSAHQLMVQDQPMDQVLDKLWRYRRGIVMYRTADMEAMHVSALLPLDDTDRALQ 306 Query: 295 VIAQTLPVKIQSITRYWINISPL 317 ++A + P++I+ +T + + + Sbjct: 307 LLASSFPLRIRHLTPWLSWVEKV 329 >UniRef50_Q7M8T7 PUTATIVE TRANSMEMBRANE SENSOR n=1 Tax=Wolinella succinogenes RepID=Q7M8T7_WOLSU Length = 320 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 73/311 (23%), Positives = 136/311 (43%), Gaps = 11/311 (3%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP--GD 66 A+ W+ + + Q+ ++ W + ++Q A ++++ L +P Sbjct: 2 SELIREEAATWWVRCNEG-LDEAQKVDFEAWLGESPEHQAALERMKRTWRALDSLPLKNR 60 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGA--GGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 A+ ++T RR KG+++ + A L E Y T +G + +L Sbjct: 61 AANNPQYETPKNRRAWQKGIVVAMFACMLLVAGLQWREGQPSFEGHYATQRGELREVELP 120 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DGS L L+T S VRF ++R VRL G+ A +K A +RPFRVL + +GT+F Sbjct: 121 DGSHLVLDTASRVWVRFYKNRREVRLEEGQAAFEVSKSA-KRPFRVLAGDLAVEVVGTKF 179 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKR---IVNAGESLQF-SASEFGAVKPLDDEST 240 VR + V++ V V + + R ++ GE ++ + L + Sbjct: 180 GVRHLKEGVSVAVEEGRVRVGQRFSEDEYRFFEELSGGEGVRIKGDGGIIKREGLFLGTI 239 Query: 241 SWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 + L F + L E I RY G++ D +R++G+F ++ D+ + + + Sbjct: 240 PFLAGRLEFDEVTLQEAIDEFARYGETGIVLEDEGAKRMRITGSFEIRRLDSFVRALPKI 299 Query: 300 LPVKIQSITRY 310 +PV+++S Sbjct: 300 IPVRVRSEAGG 310 >UniRef50_B7V267 Probable transmembrane sensor n=7 Tax=Pseudomonas aeruginosa RepID=B7V267_PSEA8 Length = 331 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 90/334 (26%), Positives = 134/334 (40%), Gaps = 22/334 (6%) Query: 1 MNPLLTD--SRRQALRS-ASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR 57 M +D L A W L ++ W Q + A+ + E L Sbjct: 1 MTRPDSDAAPYEPVLEQTAQAWLVRLR-GTPDAATRRAFEDWLAQRPAHAEAYARAEALW 59 Query: 58 NQLGGVPGDVA----------SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG--- 104 +A R +R RR + W + G Sbjct: 60 RLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWL 119 Query: 105 EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL 164 + RADY A G V+ +L DGS L+L+ SA VR D QR V L G A+ +DAL Sbjct: 120 QDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQRRVELLRGAAALRVKRDAL 179 Query: 165 QRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA-SAPAQKRIVNAGESLQ 223 PF V +G+ LGTEF VR+ T++ V Q V V A A + ++ AG+ + Sbjct: 180 --PFVVEAGEGRARVLGTEFEVRRGAGATRVTVLQGRVAVSAGTGAGAAEEVLGAGQQVG 237 Query: 224 FSASEFG-AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLS 281 F+ + G V + +W + LSF +PL EV+ L RY G + D A+ +S Sbjct: 238 FADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVS 297 Query: 282 GTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 G+F + +A L + L + Q + + I Sbjct: 298 GSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR 331 >UniRef50_B9K518 Two component sensor kinase n=1 Tax=Agrobacterium vitis S4 RepID=B9K518_AGRVS Length = 319 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 5/314 (1%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 +DSR++ R A+ W SP A ++ W ++D +N + E + G Sbjct: 7 SDSRKRRNREAADWLLRNGDPNQSPDDRALFETWLKRDPENCRTYSAAEFVMGDAGRAIQ 66 Query: 66 DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 A D R LL+ A + + ++AD + LED Sbjct: 67 SDPGLADIDMRPRNMAKPIIATLLVAALATGAFFAFDGPLRMQADMIAGTDETPIRTLED 126 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 GS++ LN SA V F R +RL G+ A A RPF V+ + ++ ALGT F Sbjct: 127 GSIVQLNASSAIAVDFTGGHRVIRLLRGQAFFQVAH-APDRPFTVVAGETKVIALGTAFD 185 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS-ASEFGAVKPLDDE-STSWT 243 VR T++ V ++AV++ A VN GE + A + AV P+D + +W Sbjct: 186 VRYGKEDTEVTVTENAVQLERDGKQAASLRVNEGEQAIYDYARKTTAVTPVDGLVALAWR 245 Query: 244 KDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + ++ + PL V+ + R+ G ++ A+A R+SGT + +T L + + L + Sbjct: 246 RGQIAVDNAPLSYVVEEMNRHFRGRIIIAGSALARRRVSGTIKVADTKDALAFVKKALGL 305 Query: 303 KIQSITRYWINISP 316 + + I I P Sbjct: 306 EATRLGP-LIVIHP 318 >UniRef50_B7X004 Anti-FecI sigma factor, FecR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X004_COMTE Length = 350 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 98/315 (31%), Positives = 153/315 (48%), Gaps = 9/315 (2%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 D R A W+ L E S +++W W QD ++ AWQ+++ ++ +L G+ Sbjct: 23 PDVPADLARQAVEWWLQLQEEPDSALLQSQWHAWRAQDPLHEQAWQRIQAVQQRLQGLGD 82 Query: 66 DVASRALHDTRLTRR------HVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 + ++RR V LLL+LG G WQ+ AD RTA+G Sbjct: 83 TPLAALARSALVSRRGGDRRRAVQALLLLVLGGGAAWQMEAHLPWRNWVADVRTARGERR 142 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQL 177 R L DG+ L LN SA D+ F A +R + L G+I + TA D+ Q RP V T G++ Sbjct: 143 RLTLPDGTRLVLNGGSALDIAFGATERRLLLRAGDIHVVTAADSQQPARPLVVQTEAGEM 202 Query: 178 TALGTEFTVR-QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 LGT FTV + + + V + AV + P Q+R++ AG+ A P Sbjct: 203 WPLGTRFTVNVAEGQRSLVAVYEGAVRLRPRLQPQQERVLPAGQQAWLDMQGVAAAVPAY 262 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 +E ++W +L + L V+ L L C PAVAGL++SGT+PL + I+ + Sbjct: 263 EEQSAWIDGMLVARNMRLDAVLQALQPATTVSLVCHPAVAGLKVSGTYPLDDVPRIMATL 322 Query: 297 AQTLPVKIQSITRYW 311 L ++++S+ R+W Sbjct: 323 GTLLQLQVRSMRRWW 337 >UniRef50_C6DD79 Anti-FecI sigma factor, FecR n=5 Tax=Pectobacterium RepID=C6DD79_PECCP Length = 317 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 132/316 (41%), Gaps = 15/316 (4%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 + D + + A+ W L+ + +QE +Q W QD ++ A +Q L + LG + Sbjct: 1 MNDYPPEIQQQAARWAIRLAEAPLDDEQELAFQHWLAQDPRHRHALEQAGMLWHGLGSLS 60 Query: 65 GDVASRALHDT-------RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT 117 + R+ R K LLL W S+ LR+DY A Sbjct: 61 AEQRQVLQPQPPATFLIKRVNRATQWKIAALLLLGFSVGTTWISDGILMLRSDYH-AVHQ 119 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQG 175 V L DGS + ++ SA + + +R V L G T A Q RPF V G Sbjct: 120 VKHVTLPDGSEVDMDAGSAISLAYTPQERRVTLLQGSAWFTVAPTTTQEKRPFLVDAASG 179 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 ALGT+F V+ T + V +H+V+V A Q ++ ++ +++ + Sbjct: 180 TTQALGTQFIVQNASQTTTVGVVEHSVQVT---ANGQSLQLDEQQAARYTEQGMTRLPGW 236 Query: 236 DD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAIL 293 + E W + +L F +PL VIA + +YR G + A+ ++SG F L D L Sbjct: 237 NSRERGDWRRGLLIFDQQPLAVVIARINQYRAGTIVIPTSALRQRQVSGIFSLNELDGAL 296 Query: 294 NVIAQTLPVKIQSITR 309 IA L K S+ Sbjct: 297 QTIATELGAKTVSLPG 312 >UniRef50_B4RTZ4 Putative regulatory protein n=2 Tax=Alteromonas macleodii RepID=B4RTZ4_ALTMD Length = 351 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 126/348 (36%), Gaps = 36/348 (10%) Query: 1 MNPL-LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 MN + S+ A W + L S ++ W + ++ A + +L + Sbjct: 1 MNNIRQFSSKEDIQEQACLWISRLDRGLKSE-EKTELDAWLSESNAHRQALLEAASLWDD 59 Query: 60 LGGV-------PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADY- 111 + + P + ++ +++ + L + T ++ Sbjct: 60 MSVLNELSGLFPQPTSRQSAKKHSVSKSAMWGIAATFLVMAIAVGVVVQRTWLDATPEFA 119 Query: 112 ------RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ 165 +T G L DGS + LNT S V F + R + L GE A D Sbjct: 120 AVSQKVQTGVGEQKNVTLADGSKMHLNTNSVVTVDFSSAVRNIVLLKGEAHFEVAHDKT- 178 Query: 166 RPFRVLTRQGQLTALGTEFTVRQ-QDNFTQLDVQQHAVEV--------------LLASAP 210 RPF V +TA+GT F ++ DN +L V V V Sbjct: 179 RPFSVTAGNNTVTAVGTAFNMQYVDDNAFELVVTDGKVLVKDRFKASASNQSLFTKRPVA 238 Query: 211 AQKRIVNAGESLQFSA---SEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNG 267 + ++ AGE + + + D+ +W + ++ F +PL V+A + RY Sbjct: 239 DEGLLMFAGEKAKVQGKVEARESLSQNDIDDDLAWQQGMIVFKGEPLDAVLAEIGRYTPV 298 Query: 268 VLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 D ++ R++G F + + D +L+ + + + + +T I + Sbjct: 299 RFHISDESLRKRRVAGYFKVGDIDGLLSALKSSFNINYEKVTDTSIEL 346 >UniRef50_Q3SNK9 FecR protein n=2 Tax=Nitrobacter RepID=Q3SNK9_NITWN Length = 334 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 77/317 (24%), Positives = 131/317 (41%), Gaps = 10/317 (3%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG-- 65 + A W+ L G+ P ++ W + D A+++V + + Sbjct: 19 ADDPFTAEALDWFVRLQGQSGDPATSRAFRAWLDGDPRRAAAFEKVTEVWGAAEFLQATK 78 Query: 66 ---DVASRALHDTRLTRRHVMKGLLLLLGAGGGW--QLWQSETGEGLRADYRTAKGTVSR 120 D A + RR + K + A + L+ADY TA G Sbjct: 79 NVADATGVAAPRQKTRRRSLAKKAAAVASAVIVAFALAKGPDLSLRLQADYVTAAGEQRL 138 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS LTLNT SA + F QR VR+ GE + L PFRV G + Sbjct: 139 VTLPDGSRLTLNTGSAVALDFANGQRDVRVLKGEAYFDV-RSGLPIPFRVAGHFGDVEVK 197 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDES- 239 GT F+V+ D+ + + + VEV + P + ++ GE++ +A+ V+ +D E Sbjct: 198 GTAFSVKLDDSEDNVVLSRGVVEVANRAHPREHASLSPGETVSVTATSISPVRKIDAERS 257 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVIAQ 298 +W + + F D+P GEV+ L RY G + A+ + +SG + L ++ +A+ Sbjct: 258 LAWLEGRIRFDDRPFGEVLNDLRRYYPGRIFVATSAIEQVSVSGNYKLDQPLLVIQSLAE 317 Query: 299 TLPVKIQSITRYWINIS 315 + + + + Sbjct: 318 AAGATVTVLPGGIVVLR 334 >UniRef50_Q4KBX2 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KBX2_PSEF5 Length = 308 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 84/308 (27%), Positives = 129/308 (41%), Gaps = 10/308 (3%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 +TD +A W +L +P Q +QQW ++ + A + + L LG Sbjct: 1 MTDHPESLEDAAIDWLVLLHSGNATPAQRMAFQQWRQRSPAHAAAAAEAQQLWGDLGQTE 60 Query: 65 GDVASRALHD-TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 +A R RR LL A G WQ +DY T G L Sbjct: 61 TARQHQAPPVMVRQPRRLWPALAASLLLALGAGLGWQ--QWPASTSDYHTGVGQQQSITL 118 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS +TLN+ SA V + A +R V L GE D QRPF V + QL + + Sbjct: 119 ADGSRVTLNSASALSVAYSADERRVILRSGEALFEPLADP-QRPFVVQAQAQQLQSAASA 177 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE--FGAVKPLDDESTS 241 F+VR+ + + V++ V+ ++ A + LQ+ + T+ Sbjct: 178 FSVRRDGHQLTVVVREGQVQFS---GDHAPVLLQADQRLQYQPGQPLLAQQTVDAASLTA 234 Query: 242 WTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 W + L F+ +PLGEVI L RY++G + D +A L +SG F L + L + Q Sbjct: 235 WQRGKLIFNGRPLGEVIGELERYQHGRILISDGQLAALAISGVFDLHDPQGSLKALQQRY 294 Query: 301 PVKIQSIT 308 P+ + + Sbjct: 295 PLHVTYLP 302 >UniRef50_C6D936 Anti-FecI sigma factor, FecR n=4 Tax=Pectobacterium RepID=C6D936_PECCP Length = 315 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 99/321 (30%), Positives = 151/321 (47%), Gaps = 13/321 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 ++ + + + L +A+ WYA L E S WQ+W QD +Q AWQQVE + + Sbjct: 2 ISSITSSIPKDVLYAAAEWYATLYDEDCSEHDRQAWQRWLRQDDTHQLAWQQVEQIHARF 61 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 V +AS L RR ++K L ++ GG S E ADYRT G Sbjct: 62 HAVDSQLASSVLSKRGEERRRMLKLLAIVSLTGGAGF---SLPWESYAADYRTGTGETRE 118 Query: 121 QQLEDGSLLTLNTQSAADVRFD---AHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 +E G L LNT SA + + + T +L GE+ + + R+ T G L Sbjct: 119 LSIETGMTLWLNTDSALNQQGSPALSQPLTFQLIKGELMLD---NQTAHAARLTTPHGDL 175 Query: 178 TALG--TEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 A ++ +R + L V V + A A+ V AG+ + F+ + P+ Sbjct: 176 AASAHTSQLALRYTSAHSVLSVFSGEVLLQTAVPAAR--RVTAGQQVIFTRDKSSEPTPV 233 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 ++ SW K L + PLG+ I ++RY +G D AV LR+SG FPL TD +L+ Sbjct: 234 ENFRQSWRKGQLVADNMPLGQFINEVSRYHSGYFHVDSAVTTLRISGVFPLHETDRLLDA 293 Query: 296 IAQTLPVKIQSITRYWINISP 316 +A+TLPVK+ +W++I P Sbjct: 294 VARTLPVKVSRRFSWWVDIQP 314 >UniRef50_Q3SQY3 Probable FecR, iron siderophore sensor protein n=3 Tax=Rhizobiales RepID=Q3SQY3_NITWN Length = 329 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 134/316 (42%), Gaps = 12/316 (3%) Query: 1 MNP---LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR 57 M P +S +A W L + + A + W Q +++ A ++ E + Sbjct: 12 MTPKDRQQHESDIALSDAAIDWLVRLKSGQATNDDHAAFAAWRGQSMEHELAAREAEAVW 71 Query: 58 NQLGGV--PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 + +G R ++TRR V+ G L + G G AD+ T Sbjct: 72 HGVGVAGDRARTLERKERRAKVTRRAVLGGGTLAVA--GFVLAGSGVIGPRAFADHVTGV 129 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G L DGS + LN S V+F AH+R + L G+ T A D RPF V G Sbjct: 130 GEQRTVGLADGSSVFLNASSGFSVKFSAHERRLSLLEGQATFTVAHD-TARPFIVEAGDG 188 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 Q A+GT F + + + V + V + +P + + +++ + Sbjct: 189 QTRAVGTVFDIDIRAGEVVVTVVEGVVAITTDQSPD-PVVARVDQRVRYLPRGRPSGPES 247 Query: 236 DDES--TSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAI 292 D T+W + L F+ +PL +V+A + RYR G ++ + L ++G F L + +AI Sbjct: 248 ADAYIETAWRRGKLIFNRRPLADVVADIERYRRGRIVLMGDGLRSLEVTGVFDLNDPEAI 307 Query: 293 LNVIAQTLPVKIQSIT 308 L+ I TLPV++ + Sbjct: 308 LHTIEDTLPVQMTRLP 323 >UniRef50_C4SII2 Fe2+-dicitrate sensor, membrane component n=2 Tax=Yersinia RepID=C4SII2_YERMO Length = 304 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 91/314 (28%), Positives = 148/314 (47%), Gaps = 21/314 (6%) Query: 10 RQALRSASHWYAVLSGERVSPQQE----ARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 Q + A+ W S + W +W +Q++ ++ +QQ+ L + P Sbjct: 2 AQIQQDAAQWLLDFSEATPGTPEHSKLLDAWYEWCQQNEQHEKIYQQMSGLWHSTRHEP- 60 Query: 66 DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLED 125 L RR ++ + L G L Q AD RT G + L+D Sbjct: 61 -----------LRRRPALRVSVWLALMVSGLLLSQ-LPYHYWLADQRTVIGEIKHIALDD 108 Query: 126 GSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFT 185 GS + LN+ SA ++ + + QR + L GE+ AKD +RPF V +R Q ALGT +T Sbjct: 109 GSEIILNSNSAVNIHYSSGQRLIVLQRGEVYAIVAKDPAKRPFVVSSRDAQARALGTRYT 168 Query: 186 VRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 V QQ T++ V + VEV K + AG+ + + +F + + SW +D Sbjct: 169 VEQQPEETKVSVVESTVEVRANGNLQAKVTLAAGQQVSLNQHQFIGPVSHNRNADSWVQD 228 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCDP----AVAGLRLSGTFPLKNTDAILNVIAQTLP 301 L F D PL +VI L+RYR G++ DP A++ LR +G P ++D L+++ Q+LP Sbjct: 229 QLIFEDAPLEQVIEQLSRYRPGLMYFDPRSRSALSELRFTGVLPATDSDQALSLLRQSLP 288 Query: 302 VKIQSITRYWINIS 315 +K+ + + +S Sbjct: 289 LKVATPLPGLVWLS 302 >UniRef50_A5VYP7 Anti-FecI sigma factor, FecR n=2 Tax=Pseudomonas putida RepID=A5VYP7_PSEP1 Length = 323 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 80/320 (25%), Positives = 138/320 (43%), Gaps = 14/320 (4%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV- 67 + + A+ W L + + + W + D + ++++ + +Q+ + Sbjct: 3 PSRIEQEAAEWALCLGEGELDADETREFDAWLQADPRHGATLRRMQGVISQVQALREQRG 62 Query: 68 -------ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 A + + R + GL L + G L AD TA Sbjct: 63 PVGAGLRAGAQVSASGSGARRTLLGLALAISLLGTLSLSGGTP-RDWLADLHTAPAEWRS 121 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 Q LEDGS LTL SA DV F +R +RL +G++ + + D RPF + T +G AL Sbjct: 122 QTLEDGSQLTLAGNSAVDVEFSTGERRIRLLHGQVLVDVSHDPT-RPFVIQTEEGSFKAL 180 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 GT F V + ++L + + VE A + +V GE + G + +D Sbjct: 181 GTRFVVSEGHARSELTMLESRVEARTA-VSGDQLVVGPGERAWVARDGLGPLPAIDPARV 239 Query: 241 --SWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNVIA 297 +W L PL +V+ L R GVLR D A+ +++S PL +++ L ++A Sbjct: 240 DRAWQHHQLVADGVPLDQVLDALAEQRRGVLRFDRQAMQAIKVSAVLPLDDSERALRLLA 299 Query: 298 QTLPVKIQSITRYWINISPL 317 + LP++I + R+W + P+ Sbjct: 300 EALPIRIGGVGRWWTTVEPV 319 >UniRef50_C7JHQ2 Two component sensor histidine kinase FecR/PupR n=8 Tax=Acetobacter pasteurianus RepID=C7JHQ2_ACEP3 Length = 341 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 84/325 (25%), Positives = 130/325 (40%), Gaps = 11/325 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M + R+QA R A+ W +L E P+ A ++ W N+ AW Q + + Sbjct: 18 MTVIDDPVRQQASREATQWLILLQEEPDDPEVRAGFEAWLGAAPVNREAWAQTQTAMGLV 77 Query: 61 GGVPGDVAS----------RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRAD 110 + D R + R G L L A + ++AD Sbjct: 78 NYLSPDNTGNWQQKKRNIVPLPLRHRFSSRATRAGFALALVACLALFFAGPDFMLHMQAD 137 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 T L DGS +TL SA + R+V L GE + D RPF V Sbjct: 138 AITGTAETRVLSLSDGSSITLAPGSAVSINTQGIHRSVSLLAGEALFSIVHDP-ARPFAV 196 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 T +GT F V+ + V+ V V + PAQ R + G++L SA+E Sbjct: 197 KAGGFTTTDIGTVFDVQWAQGAVNVAVRTGRVRVNGGAIPAQGRELGTGQALTASATEVY 256 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTD 290 ++ +W +L +D+PLGEV+A L Y +G++ P +A R+SG + L N Sbjct: 257 NNNLPAEQVGAWADGLLVANDEPLGEVVAKLKPYLHGMVIVSPHLALQRVSGVYSLSNPA 316 Query: 291 AILNVIAQTLPVKIQSITRYWINIS 315 L IAQ ++ + + + Sbjct: 317 RALEAIAQARQRTVRRYSPWLTVLR 341 >UniRef50_Q4KI13 Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Pseudomonadaceae RepID=Q4KI13_PSEF5 Length = 329 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 22/333 (6%) Query: 1 MNPLLTDSRRQALRSAS-HWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 MN + A A+ W ++L + S +A + QW + D + A+ Q + + Sbjct: 1 MNHRTSICPTPAQEQAALAWLSLLHD-QPSSGDQATFSQWLQADPAHIEAYAQAQVVWEL 59 Query: 60 LGGVPGDVASR--------------ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG- 104 +A A R + +L A WQ Sbjct: 60 SEQPARTLADEDAFALHGLLRSMDAARGRARRRWSAGLALAASVLLAVALGAGWQPGRWV 119 Query: 105 EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL 164 + L ADY +A G V L D S +TL+ SA V F +R V+L G + + Sbjct: 120 DDLGADYVSAPGQVRTLTLADQSQVTLDADSAIAVDFSRGERHVQLRRGAGFFSVSHTGE 179 Query: 165 QRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF 224 PF V ++G+ LGT+F VR Q Q+ V V V A AQ+ + AG+ + + Sbjct: 180 --PFVVDAQEGEARVLGTQFEVRLQPGGAQVTVLSGRVGVTPAKGAAQQV-LGAGQQVAY 236 Query: 225 SASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSG 282 + +D E+ +W + L++ PL EV+ L RY G + + +A R+SG Sbjct: 237 GHGVAAPLHAVDSEAQLAWRQGWLNYYHAPLAEVVDDLRRYFPGRILLLNDELAARRISG 296 Query: 283 TFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 +F K+ A+L+ + L + + +I + Sbjct: 297 SFSSKDPQAVLDSLQAVLGFQQHRVLGRFIVLR 329 >UniRef50_B7VA52 Probable transmembrane sensor n=5 Tax=Pseudomonas RepID=B7VA52_PSEA8 Length = 317 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 87/312 (27%), Positives = 145/312 (46%), Gaps = 9/312 (2%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG-----GV 63 R + L A+ W A+L ++ +QQW + D ++ + ++ G+ Sbjct: 6 RERILDEAAQWMALLQSGHAGAEERLAFQQWRQADAEHGAVFDRLSLGLQSFRDEPLHGL 65 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQ-SETGEGLRADYRTAKGTVSRQQ 122 + AL RR + + L L L + G D T G + Sbjct: 66 RAEQLIGALEAPSARRRFLQRSLALAAFGVATLALGRIGIVGFPWPGDLYTGTGQRQSFR 125 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 LEDGS L L+ +S FD ++R +RL G + + A+D RPF V T +GQ+ A GT Sbjct: 126 LEDGSQLVLDARSRVRPEFDGYRRRLRLREGRLLVDVARDP-ARPFVVDTGRGQVEAQGT 184 Query: 183 EFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSW 242 F V +++ V + V + A ++ ++ G+S +F AS A P + ++W Sbjct: 185 RFQVSDDGASSRVVVLESRVRITTAD--GRQCLLERGQSARFDASAILARGPAEGGESAW 242 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 L D+PLGEV+ L YR G++ A LR+SG +PL ++ A L ++ Q+LP+ Sbjct: 243 LDGRLEVRDRPLGEVLEALRAYRRGIISVADDAAALRVSGIYPLDDSGAALALLEQSLPI 302 Query: 303 KIQSITRYWINI 314 ++ YW++I Sbjct: 303 RLDYHGPYWVSI 314 >UniRef50_B4WC07 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WC07_9CAUL Length = 325 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 82/322 (25%), Positives = 122/322 (37%), Gaps = 12/322 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M R + A+ W + E + Q W D +++ A+QQV L Sbjct: 1 MVTPSASRRDRVRAEAAVWLTRIQRETGVEESRQALQDWLALDPEHRLAFQQVTETWEFL 60 Query: 61 GGV-----PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 G P A RR ++ L+ LG + Y T + Sbjct: 61 PGAAALMSPKHSAPARSSRGSAPRRSAVRPALVGLGLAACVLAAVGIMVIKGGSVYVTEE 120 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G L DGS LTLNT S A V + A +R VRL GE A A D PF V+ Sbjct: 121 GQHRAMTLADGSRLTLNTDSRAKVIYSATERRVRLDRGEAAFDVAHDPAH-PFVVVAGTT 179 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK-----RIVNAGESLQFSASEFG 230 ++ ALGT F VR+Q + + + + V++ A A A+ + G+ LQ + Sbjct: 180 EIRALGTAFVVRRQGDRVSVTLVRGKVQISGAGADARGAKRVLATLIPGQRLQVAPQAQP 239 Query: 231 AV-KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 + P + T+W + + F L E + RY + D V+GLR+SG F Sbjct: 240 QLDTPSIEMVTAWEQGEVIFESATLAEAANEMNRYGPIKVTVDADVSGLRISGVFATNQA 299 Query: 290 DAILNVIAQTLPVKIQSITRYW 311 AQ ++ Sbjct: 300 AEFAAAAAQLHGLRAVPREDGL 321 >UniRef50_Q4KE62 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KE62_PSEF5 Length = 321 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 105/325 (32%), Positives = 153/325 (47%), Gaps = 14/325 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL---- 56 M+ D + SA W + +S QQW + ++++AWQ+V +L Sbjct: 1 MSGAAVDP--RVRDSAIDWLVRMQSGLMSAADHQALQQWRQASVEHEYAWQRVSSLPLML 58 Query: 57 ---RNQLGGVPGDVASRALHDTRLTRRHVMK-GLLLLLGAGGGWQLWQSETGEGLRADYR 112 N L A +A RR V+K L L L G WQ S A YR Sbjct: 59 QPGANLLADATARRALQAAGADPQRRRQVLKCLLALGLLGGISWQGADSTLVRSALASYR 118 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T G L DG+ L LNT SA ++ A QR+++L GE+A+ T + ++ T Sbjct: 119 TGVGERRHWALADGASLWLNTASAVNLDLSARQRSLQLIEGELALDTPAGSAS--LQLST 176 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 L + G VR TQ+ V + V+V PA + AG + G Sbjct: 177 PDAVLYSRGANLLVRHDRLGTQVTVLRGLVQVSARQHPA-PLALQAGWQTRVDGRGAGRP 235 Query: 233 KPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDA 291 P+D + +W + IL L +++A L+RYR G LRC AVAGLR++G+F L +TDA Sbjct: 236 SPIDTFLAQAWMRGILPAERMRLDQLLAELSRYRPGFLRCSEAVAGLRVTGSFQLDDTDA 295 Query: 292 ILNVIAQTLPVKIQSITRYWINISP 316 L ++A TLPV+I+ TRYW+ + P Sbjct: 296 ALALVANTLPVRIERRTRYWVTVVP 320 >UniRef50_Q217A2 Putative FecR n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q217A2_RHOPB Length = 334 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 119/318 (37%), Gaps = 12/318 (3%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR---------NQ 59 +A W+ L + +W Q ++ A+ ++ + + Sbjct: 18 PDPVTDAALDWFVRLQASPEDAAVSDDFARWRNQSPNHAEAFAKLTQIWTSPEIELATQR 77 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 L R + W +ADY TA G Sbjct: 78 LAQRSVHPLPIRRRSPPRRRWTRSITAIAAAALIAIGLQWVPALIIQRQADYMTATGDRQ 137 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 + L DGS +TLNT SA +RF +R+VRL GE DA PF V R ++ Sbjct: 138 QVILPDGSRMTLNTASAVALRFSNGERSVRLLQGEAFFDVVPDATH-PFTVAGRFAEVGV 196 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF-GAVKPLDDE 238 GT F+VR D + + + +VEV A+ + G S+ SA+ GA Sbjct: 197 KGTAFSVRTDDQQDVVVLARGSVEVARLPDRAETARLEPGYSVSASATALSGASHIDIAS 256 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTDAILNVIA 297 S +W + F+D+PL +V+ + RY + D + + +SG++ L N + + +A Sbjct: 257 SLAWLDGRIVFNDRPLRQVLDEVKRYYPRPVLIADRRIGDVTVSGSYRLANPEGTIRSLA 316 Query: 298 QTLPVKIQSITRYWINIS 315 + I + + Sbjct: 317 MAAGATVTRIPGGLLILR 334 >UniRef50_A9CFJ7 Two component sensor kinase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CFJ7_AGRT5 Length = 323 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 78/316 (24%), Positives = 135/316 (42%), Gaps = 5/316 (1%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 LT +R+ R A+ W + A +++W E D +N A+ + + + Sbjct: 7 RRRLTRDQRKRNREAADWVFRNRDPDQPETELAEFRRWMELDPENCRAYTAAKRILGEAR 66 Query: 62 -GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 + D R + +R ++ A G + + AD + + Sbjct: 67 TAIRSDAGLREAPVSSSSRGRNAIISSVVAIAAAGTLFIALDGPMRMSADIMSDTDEMPE 126 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 LEDGS + LN SA + F + +RTVRL G+ + DA +RPF V +TAL Sbjct: 127 VTLEDGSRVQLNASSAIALDFTSERRTVRLLRGQAFFQVSPDA-KRPFSVSADDTLVTAL 185 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESL-QFSASEFGAVKPLDDE- 238 GT F VRQ T++ V +H+V V A V GE + + + ++ D Sbjct: 186 GTAFDVRQSATDTRIAVTEHSVRVDFKEPGALPVKVGEGEEVLHLNETGKSTIRKTDANT 245 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIA 297 + +W + L+ + PL VI + R+ +G + + A A +SGT + +T++ LN + Sbjct: 246 ALAWRRGQLTVDNMPLSYVIEEIQRHFHGRIVIGNEATARRVVSGTLFVTDTESALNFLR 305 Query: 298 QTLPVKIQSITRYWIN 313 L ++ I + Sbjct: 306 TALNIQTYKIGPIIVV 321 >UniRef50_B0KMD4 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KMD4_PSEPG Length = 309 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 87/312 (27%), Positives = 128/312 (41%), Gaps = 15/312 (4%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 D R+A W L+ V P + W Q ++Q A+ + L G + Sbjct: 6 APLDPSPDVRRAAQAWVVRLTSGDVRPGDVEAARAWCAQAPEHQQAFVEARRLWALSGQL 65 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 RA + +L+ G W ADYRT G L Sbjct: 66 QAPARRRAPARQ-----WALASAAVLVLGVGVALAWHG----QWGADYRTGVGERRVVTL 116 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS ++L+ +SA DV + R + L GE A D RPF V Q TALGT Sbjct: 117 SDGSRISLDAESAVDVEMNDRARRITLRKGEAVFEVAHDP-ARPFTVQAGAVQATALGTV 175 Query: 184 FTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSW 242 + V ++ + V++ V V A + ++AGE++ A G LD D + +W Sbjct: 176 YAVSREGASVGVVVKRGRVAVS---DTADRVELSAGEAVGREAGRLGGKHGLDVDSALAW 232 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLP 301 + L F PL +V+ L RYR G L D + GL++SGTF L D L + Q P Sbjct: 233 QQGRLVFEQAPLAQVLKALERYRPGWLLIGDEQLRGLKVSGTFQLDRLDEGLATLEQAFP 292 Query: 302 VKIQSITRYWIN 313 + I + + + Sbjct: 293 LSIHRYSDFLLV 304 >UniRef50_B4S0Z9 Putative regulatory protein n=2 Tax=Alteromonas macleodii RepID=B4S0Z9_ALTMD Length = 368 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 76/354 (21%), Positives = 133/354 (37%), Gaps = 43/354 (12%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 N + +S + L AS W L + ++ + W ++ + ++ L +++ Sbjct: 18 NVVQFNSDERVLDVASEWLVKLDEG-LDNEEMQALKTWLAT-PLHRDTFLEMVALWDKMS 75 Query: 62 GV----------PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGE------ 105 + P A + T +R + +L+ +Q + Sbjct: 76 VLSELADIVPHTPEPNAKHKTNSTVAWKRPLAIAASILMVGLLSYQGLNLFSPSNQTEPV 135 Query: 106 GLRADYR----TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAK 161 A Y T G LEDGS L LNT S ++ F R ++L GE+ I AK Sbjct: 136 AQMASYSLQASTKPGEHKSISLEDGSTLWLNTNSQVNIAFTDTSRIIQLVKGELHINVAK 195 Query: 162 DALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS------------- 208 D RP VL + A+GT F V+ +L V + VEV + Sbjct: 196 DK-SRPLNVLAAGKAIQAVGTAFNVQYHRGDLELVVTEGVVEVASYTLNKANGESIVNPI 254 Query: 209 --APAQKRIVNAGESLQFSASEFGAVKPLD---DESTSWTKDILSFSDKPLGEVIATLTR 263 A+ + GE S D SW + + F +PL +VI ++R Sbjct: 255 IKPQARPLTLVQGEKSLLSLPNSTVETVSDKDIANDLSWREGKIVFRGEPLIDVIEEVSR 314 Query: 264 YRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 Y + + D A+A ++++G F + DA++ +A L + + + + P Sbjct: 315 YTDKTVVLGDAALANMQVAGLFNTNDVDALIAALADNLQISTDYSSDTIV-LRP 367 >UniRef50_B4SJG6 Anti-FecI sigma factor, FecR n=2 Tax=Stenotrophomonas RepID=B4SJG6_STRM5 Length = 345 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 76/344 (22%), Positives = 121/344 (35%), Gaps = 28/344 (8%) Query: 1 MNPLLT---DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLR 57 M L + +A+ W P+ EA Q W + + ++ A+ V Sbjct: 1 MTDLPSAAGSDPFALHEAAAAWLVRRQDAAWQPKDEAALQHWLAESEAHRQAFADVARTW 60 Query: 58 NQLGGVPGDVAS------------------RALHDTRLTRRHVMKGLLLLLGAGGGWQLW 99 + LG +P V + RA+ R R + + G+ + Sbjct: 61 DDLGQLPRPVLASDARAVITPAVPAIQRRGRAVRHARSWRLPRVAAAAAVAMLALGYLGY 120 Query: 100 QSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITT 159 D T G + QL DGS ++LN +S V F +R V L GE Sbjct: 121 GWYAAPSYVQDVATGAGEIRDLQLPDGSRISLNARSTLAVHFYRSRREVVLSQGEAFFEV 180 Query: 160 AKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQ-KRIVNA 218 A A RPF V ++ ++T +GT F VR + V V V A ++A Sbjct: 181 AP-AADRPFTVDAQRSRVTVVGTTFNVRNGPGEVVVKVLHGHVRVQPDRAEGASPVSLHA 239 Query: 219 GESLQFS--ASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAV 275 + L + + + + D W L F PL EV + +Y + P + Sbjct: 240 EQGLAVTTLTAAYRPIAASADSIGGWRNGRLVFRRTPLDEVAQEVGQYLGHPVTLGQPGL 299 Query: 276 AGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI--TRYWINISPL 317 L +SG L + LPV++ Y I+ P+ Sbjct: 300 KFLPVSGYAATDAPATFLEALPDLLPVQVTRTAQGGYRIDERPV 343 >UniRef50_B4RFZ1 Transcriptional regulator n=2 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFZ1_PHEZH Length = 328 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 86/329 (26%), Positives = 134/329 (40%), Gaps = 19/329 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ RQ L A+ W+A L+ V+ +++W ++D DN A+ VE ++ Sbjct: 1 MSERAATPSRQEL-EAAEWFAKLNKLSVTTDALRTFREW-KKDPDNAAAYAAVERTWSEA 58 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLR-----------A 109 + D R D L RR + L Sbjct: 59 RSLRSDPDIRRAADEALARRPARPAASRASRLWPAAVVAALLVAVLLVGAAAVALTQRPV 118 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 Y TA G LEDGS L LNT +A V F R + L G+ A D RPF Sbjct: 119 SYATAHGEQRLVVLEDGSRLRLNTDTAVTVSFRGEARRLALKRGQAFFEVAHDP-SRPFI 177 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF 229 V + ALGT F V ++++ ++ + + V V ++ +S+ + Sbjct: 178 VTAGDTTVRALGTRFEVWRRNDGARVTLVEGKVSVT--RGQQAPTVLAPSQSVVATRDGL 235 Query: 230 GAVKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AGLRLSGTFPLK 287 V +D ++T WT L+F D PL E +A + RY + DPA A +SG F Sbjct: 236 TPVTSVDPVQTTGWTTGRLTFRDTPLSEAVAEINRYSAQTIALDPAAPASRPVSGVFDAG 295 Query: 288 NTDAILNVIAQTLPVKIQSITRYWINISP 316 +TDA ++ + L ++ + R I +SP Sbjct: 296 DTDAFVDAVGVLLNLEAERQGR-IIRLSP 323 >UniRef50_D1NXK1 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1NXK1_9ENTR Length = 318 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 128/312 (41%), Gaps = 8/312 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M ++ + A+ W + + ++ Q+E +QQW + ++ A+ + L Sbjct: 5 MESQYSNKPSEIEEVAAFWVIKTTQKNLTSQEEHEFQQWVTTSEQHRNAYFKARQLWGLT 64 Query: 61 GGVPGDVASRALHDTRLTR--RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 G+ V + T + + L+ + + +W + E + DY+ G + Sbjct: 65 SGIALSVQKGSSRKTGNIKFAPRWIAMASALILSVFSFAIWSFLSQESV--DYQAKNGEI 122 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ--RPFRVLTRQGQ 176 L DGS + L++ +A + F+ R V L G + A + Q RPFRV G Sbjct: 123 LHIILPDGSQVDLDSGAAITLEFNEGYRQVNLHSGRAYFSAAPISTQEPRPFRVKANNGT 182 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 + ALGTEF + Q+ + V +H V++ L S Q+ I AG+ + V Sbjct: 183 VQALGTEFEIDTQEKQVNVAVYEHQVQITLLSGETQRVI--AGDQASYQQHISPMVPANI 240 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 SW K ++ F + VI L+RYR + +SG F + + + L + Sbjct: 241 QHGVSWRKGLIIFQQSSVDHVIHELSRYREKPIILLGNPPQAMISGVFQIDSVENALLTV 300 Query: 297 AQTLPVKIQSIT 308 + + + + Sbjct: 301 TSSKGLSVSELP 312 >UniRef50_Q6FD18 Putative transmembrane sensor n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FD18_ACIAD Length = 324 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 133/323 (41%), Gaps = 14/323 (4%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + ++ + A+ W +LS S R +QW +Q ++ +++++ Q+ + Sbjct: 1 MPNPDQKIIIEEAAKWLVILSSGDYSQNDLDRLEQWKQQSHEHLKTFEELQQFLGQMDVL 60 Query: 64 PGDVASR--------ALHDTRLTRR--HVMKGLLLLLGAGGGWQLWQSETGEGLRADYRT 113 L T+ R V+ L++ W + Q + AD+ Sbjct: 61 KSQNLQSQHPLVQNNILRKTKTKARTAPVLWSGSLIIAVIAIWAVSQ-LPYQRWNADHSI 119 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 + L D S + + Q+A ++R+ ++QR + L G I + KD RPF + Sbjct: 120 EAQQWQQNILSDQSSVQMAGQTAYNLRYSSNQRKIDLVEGNILVDVTKD-HARPFVIDLG 178 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 Q+ ALGT+F V + ++ + + + + ++ AG+S F+ + K Sbjct: 179 DIQVQALGTKFIVNYNHDQIRVSMIESKTRIYSVHHRFEPIVLQAGQSFNFNGHDVQVEK 238 Query: 234 P-LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDA 291 D +W + L +D L +V+ L Y++ + ++ R++ PL + D+ Sbjct: 239 INPDILQKAWQRKKLVVNDMSLDQVLDLLESYQSSKFIYNRKSLTKYRVNAVLPLDDPDS 298 Query: 292 ILNVIAQTLPVKIQSITRYWINI 314 + ++ L + + ++ + I Sbjct: 299 AIQLLKDQLDLNVYTVGQLLTVI 321 >UniRef50_D0Y1A0 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y1A0_9CAUL Length = 331 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 83/329 (25%), Positives = 135/329 (41%), Gaps = 19/329 (5%) Query: 5 LTDSRRQALR---SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + D R++ LR A+ W+ +LS V + R+ +W ++D N+ A++++E++ G Sbjct: 1 MIDDRQKTLRQDKEAAAWFTLLSDTEVETEALERFDKWIQRD-GNRAAYRRIEDISTAAG 59 Query: 62 GVPGDVASRALHDTRLTRRHVMKGLLLL-----------LGAGGGWQLWQSETGEGLRAD 110 + D RA L RR L L G Sbjct: 60 DLRDDPEMRAAAREALGRRKPRASASSLFRLGPPRLWGGLALAGVIASAVLFATLTRPKT 119 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y TA G QL DGS + LNT +A V+F +R + L G+ A D RPF V Sbjct: 120 YETAVGGRMTAQLSDGSTVQLNTDTALRVKFSHGERRLELVRGQAFFNVAHDP-ARPFLV 178 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF--SASE 228 ++ ALGT F VR + + Q V V + Q ++ G+ L Sbjct: 179 RAGAMEVRALGTRFDVRHDSADASVALAQGQVRVRQRTGQRQAWTLSPGQGLTVLSDGRS 238 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AGLRLSGTFPLK 287 G + T WT++I++F D LG+ +A + RY + P V A +LSG F Sbjct: 239 TGPARIDVAALTGWTRNIITFHDIALGDAVAEMNRYDRAKITLAPGVPAHAKLSGVFTTG 298 Query: 288 NTDAILNVIAQTLPVKIQSITRYWINISP 316 + + L+ + ++ + + + P Sbjct: 299 DQEEFLDAAKASFDLESRRRPDGGVELRP 327 >UniRef50_A5V578 Anti-FecI sigma factor, FecR n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V578_SPHWW Length = 339 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 122/330 (36%), Gaps = 19/330 (5%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRN----- 58 + + + AS W + ++ ++ + +W D + AWQ + + Sbjct: 7 IPDPEQDRIDMQASEWVVLQDDRELTAAEQDDFDRWLAADPRHARAWQDLSRTWSTLPVL 66 Query: 59 -QLGGVPGDVASRALHDTRLTRRHV----MKGLLLLLGAGGGWQLWQSETGEGLRADYRT 113 +L + D TR +V + + A L + ++T Sbjct: 67 NKLSELATDPIDVTPEATRHRWGYVRVPKIALGVAGAVAAMVAFLAVGPSLLPQPEVFQT 126 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 L+DGS +TL +S V F +R V L GE D RPF V Sbjct: 127 GVAQTQLLTLDDGSQVTLGPRSRLTVAFADAERRVVLASGEAFFEVTHD-RSRPFLVEAG 185 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKR----IVNAGESLQF---SA 226 +GT+F V D ++ V + V+V A +R ++ AG+ + SA Sbjct: 186 GSTTRVVGTKFDVNYADTSVRVGVLEGRVQVSRADPDPARRPATALLQAGQRAEIRLASA 245 Query: 227 SEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFP 285 ++ V+ +W + L + + L ++++ + RY GV+ D + LR++ +F Sbjct: 246 ADPLIVRLSAPMPGAWRQGRLVYENSRLSDLVSDVNRYYAPGVIVADKGILDLRVTASFK 305 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINIS 315 A L + LPVK + Sbjct: 306 ASEIPAFLASVGTVLPVKATETAGGAYRLE 335 >UniRef50_A4ABA5 Fe2+-dicitrate sensor, membrane component n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABA5_9GAMM Length = 357 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 124/346 (35%), Gaps = 34/346 (9%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + L AS W A + + +S QW + + A + + + L Sbjct: 3 TAVQFPEEALILDQASAWVAKMVADTMSEADREALDQWLAESPAHSKALLECADTWDDLD 62 Query: 62 GVP--GDVASRALHDTRLTRRHVMKGLLLLLGAGGG-------------WQLWQSETGEG 106 + D+ R T + G G G ++ Sbjct: 63 ELAQLADMFPRKQPQKVSTTTPTVSTWFPSKGFGLGAIAASAVFAAMLILIYPGTDQPST 122 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQ--RTVRLWYGEIAITTAKDAL 164 TA G L DGS LNT S + FD R V L GE D Sbjct: 123 YVHQTVTAVGEYRTAVLPDGSKAMLNTDSQIEATFDPDDAIRRVALIKGEAHFDVEPDP- 181 Query: 165 QRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP-----------AQK 213 RPF V ++ A+GT F V ++ V + VE+ + +A + Sbjct: 182 SRPFVVEVGDTRVVAVGTAFNVDSSSGRLEVTVTEGIVEIHVGAAEVASPGRTQLQHERG 241 Query: 214 RIVNAGESLQFSASEFGAV----KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVL 269 + AG+ S + +V P + W + + F +PL +V+ L+R+ + Sbjct: 242 QQFKAGQIAIISKHQIESVGFVEAPEIERKLLWQQGKVQFVGEPLSQVVRELSRHTHYTF 301 Query: 270 RC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 + D V +R+ G F L + D +L+V++ + ++++ T I++ Sbjct: 302 KFSDTQVGDIRVGGYFQLGDIDELLDVLSGSFNIEVKRDTAGVIHL 347 >UniRef50_B4W7I5 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W7I5_9CAUL Length = 321 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 129/324 (39%), Gaps = 15/324 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M R A+ W A G + E R + W E N A+ + ++L + Sbjct: 1 MMSRAPRHVAPIDREAARWLAEQDGGLLDAVGEDRLKTWLET-PANARAFARAQSLWRDM 59 Query: 61 GGVPGDVASRALHDTRLTRRHVMKG--------LLLLLGAGGGWQLWQSETGEGLRADYR 112 G A + R + L A + L AD Sbjct: 60 GQAARPAAPAWRARSERRSRRTAIPRIGRSGLPIATGLAAAVVLACMMLDVPTRLHADVL 119 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T G +L+DGS++ +NT SA DV + +RTVRL GE A T A DA QRPF V Sbjct: 120 TRPGEQRTVRLDDGSVVQVNTDSAIDVAYAPDRRTVRLLRGEAAFTVAPDA-QRPFTVEA 178 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEF-GA 231 G TALGT F VR++ TQ+ V +H V + S + + + A Sbjct: 179 GGGSATALGTRFVVRRRAAMTQVSVTEHRVRIATRSG---SVTTPETMTSTYRPDQAPSA 235 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTD 290 P + +WT+ L F D+PL EV+ + RY + AV R+SG F + Sbjct: 236 PTPSSPDVDAWTQGWLVFEDRPLAEVVEEIARYSPTPITVFGRAVRNRRVSGAFGIDQPS 295 Query: 291 AILNVIAQTLPVKIQSITRYWINI 314 L + QTL V+ + + I Sbjct: 296 RTLARLEQTLGVRATRLPGGAVII 319 >UniRef50_B6X9X8 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6X9X8_9ENTR Length = 333 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 124/313 (39%), Gaps = 8/313 (2%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 +++ A+ W+ + +++S QQ ++ W + + A++ + ++ + VP Sbjct: 16 EQQRIDEEAALWFTRMHSQQLSDQQSQAFKVWLRASKAHADAYEAMASIWQDIEKVPRPA 75 Query: 68 ASRALH---DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 ++ + + + A + + L + + L Sbjct: 76 PTKTTTSTFRLSSFWKPLGHVVAACFIAVVLFLPYSQLPSMLLNNMTLVSTDSTKEVTLS 135 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DGS+L LN + V ++ R + L +G + RPF + Q ++ +GTEF Sbjct: 136 DGSVLFLNRDTRIRVAYETPIRQLYLDHGSAYFKVKSNPY-RPFVINVDQRRIQVVGTEF 194 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS--ASEFGAVKPLDDESTSW 242 V ++ ++V Q V + ++ AG+ S S+ + W Sbjct: 195 EVNKKGEQVAVNVSQGIVSFQSL-KDQKPVLLLAGQGALSSSINSKIALNSVTPQDVARW 253 Query: 243 TKDILSFSDKPLGEVIATLTRYRNGVLRCDP-AVAGLRLSGTFPLKNTDAILNVIAQTLP 301 L+F DKPL EV++ L Y N + P ++A ++SG L+ DA + LP Sbjct: 254 RFGELTFVDKPLSEVLSELKTYSNFQVELSPSSLANQKISGRINLQQPDAFFQALPALLP 313 Query: 302 VKIQSITRYWINI 314 V++ + + I Sbjct: 314 VQVVYQDKNNLLI 326 >UniRef50_Q4KE34 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KE34_PSEF5 Length = 324 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 130/330 (39%), Gaps = 21/330 (6%) Query: 1 MNPLLTDSR-RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M L+ AS+W+ + R++QW + A++ +E+L Sbjct: 1 MTEHLSALPGDAIREQASYWFTQREAMTHNLPLRQRFEQWRNSHAQHAEAYRALEDLWQA 60 Query: 60 LG------------GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGL 107 +P A R R + +L+ G GW L Sbjct: 61 SAFEQALEQLALGLDLPAAPAPATPRRKRHRTRWLAAAATVLVMLGAGWFGDLPL---RL 117 Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRP 167 +AD+ +A G + R L DGS + L + SA F +R ++L GE+ + D RP Sbjct: 118 QADHLSAVGELQRFDLADGSHIVLGSDSAISSDFSNARRRIQLLRGELYVEAFHDP-SRP 176 Query: 168 FRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSAS 227 + +T +GT F+V +Q + + V++ V + A Q+ ++ AG Q Sbjct: 177 LTIEAGSATVTVVGTRFSVSRQADGVTVAVREGRVRL--ADENGQQSLLQAGNWQQLQGH 234 Query: 228 EFGAVKPL-DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFP 285 + P + SW LSF D PL +V+ L RY + + A ++SG + Sbjct: 235 RLLPLNPEGSERQLSWINGRLSFQDAPLAQVLQELGRYHRAPILLFNADAAQQKVSGNYQ 294 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINIS 315 L + AI+ +++ ++ + + + Sbjct: 295 LDDPQAIVRALSKVTATELTRLPGGILVLR 324 >UniRef50_B0SXJ1 Anti-FecI sigma factor, FecR n=2 Tax=Caulobacter RepID=B0SXJ1_CAUSK Length = 342 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 84/338 (24%), Positives = 143/338 (42%), Gaps = 24/338 (7%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 P + + + +A+ W+A L G+ V + +++W D N AW + + + ++L Sbjct: 4 TPPVNERQEDPDSAATTWFARLQGDAVLVEDRRAFERWLGADARNAAAWDRCKGVWDRLS 63 Query: 62 GVPGDVASRA----------LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRA-- 109 + D A A +RL+RR ++ ++ G G + +G + Sbjct: 64 LLDSDPALAALRADALGASDASSSRLSRRGLLTAAGVVAMVGSGAAVAWRLMPKGASSST 123 Query: 110 -------DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD 162 + TA G +S L DGS++TL+T SA V +R + L G+ AKD Sbjct: 124 STASADPTFTTAVGELSTFHLADGSVVTLSTDSAVKVDPWNRERRLSLLRGQAFFKVAKD 183 Query: 163 ALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI-VNAGES 221 A RPF V +TA+GT F VR + + + V + S + + ++AG Sbjct: 184 A-ARPFVVAVGDKLVTAVGTAFDVRLDPGKLSVTLLEGRVRIAGPSPRGDRMVEMSAGSK 242 Query: 222 -LQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLR 279 + A+++ + +SW + L F +PL V+A + R+ LR DP VA Sbjct: 243 FVAADAADWNIAAVDAVKESSWLQGRLVFDGEPLSAVVAEMNRFSTRKLRVSDPRVAATP 302 Query: 280 LSGTFPLKNTDAILNVIAQTLPVKIQSITRYWI-NISP 316 +SG F DA + I + + I I P Sbjct: 303 VSGVFKTGQVDAFVAAIRSYGLADVGRVDGQEIELIRP 340 >UniRef50_Q2RW10 Putative FecR n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RW10_RHORT Length = 318 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 111/321 (34%), Gaps = 9/321 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M P L AS W G P A ++ W D + AW+ Sbjct: 1 MIPADHSLPASVLEQASDWVFRQQGALGEPPPRADFEAWLAADPRHGEAWRLACATWGAT 60 Query: 61 GGVPG--DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 G + R L +R + L L A + S +AD+ T G Sbjct: 61 GALAPVFAAPPRPLCRPPRRKRPSKPLVALALAACLAAFVVLSPLRLLWQADHLTGSGES 120 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 + L DGS + L SA R R V L G+ A D RPF V +T Sbjct: 121 ATVSLRDGSRVALAADSALSTRISEAGRAVTLLKGQAFFQVAPDRT-RPFVVSGGGVSVT 179 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA--SEFGAVKPLD 236 GT F V D + V + V V + + GE + E Sbjct: 180 VTGTAFDVALDDGRVTVAVAEGGVRVDYQ---GRSERLVPGEKVSVDPAMGEIRRAAVDP 236 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTR-YRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W + L ++ L VI L R Y ++ D A+ ++G + L++ + L Sbjct: 237 ADVAAWRQGRLVSDNQRLSAVIEALRRQYSGVIVLTDAALGETPVTGVYDLEDPERALRA 296 Query: 296 IAQTLPVKIQSITRYWINISP 316 + ++ +T Y + +SP Sbjct: 297 LVSPFGGTVRRLTPYLLVVSP 317 >UniRef50_B1KDJ5 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonadales RepID=B1KDJ5_SHEWM Length = 359 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 134/339 (39%), Gaps = 33/339 (9%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD- 66 S+ + A+ W + + +S + +W + + +Q A ++ + + L + Sbjct: 9 SKEELQEQAALWISRIDRG-LSEVEIDSLSKWVSESKAHQDALFEMASYWDDLSVLNELS 67 Query: 67 ---VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRA------DYRTAKGT 117 A + ++ + LLL GG W L + A + G Sbjct: 68 VLFPLETAKNKSKWQYAAIAASFLLLSFVGGNWLLGGQISQHIWGAGEIYTQRLESPVGK 127 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 + L DG+ + LNT S +V + ++ R + L GE AKD +PF V Sbjct: 128 QTSFSLPDGTQVQLNTNSVVEVDYSSNYRQLTLVTGEAKFDVAKD-RSKPFTVTAGVQAF 186 Query: 178 TALGTEFTV-RQQDNFTQLDVQQHAVEVLLASAPAQK---------------RIVNAGES 221 TALGT F V + + +L V V V ++ +V+ GE Sbjct: 187 TALGTVFNVQKNDEQDMELVVTHGKVLVTSVDKSLEQIKESLSDIAEQSLPGLLVSTGEK 246 Query: 222 LQFSASEFGAVKPLDDEST----SWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVA 276 + + + AV+ L E +W + +L F +PL + + ++RY + DP ++ Sbjct: 247 VVIAKNTSLAVEALPLEQMQRDLAWQQGMLIFEGEPLSQALDDVSRYTSVKFEIVDPELS 306 Query: 277 GLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 L+++G F + D +L ++ + + I+++ Sbjct: 307 ELKVAGYFKAGDVDGLLASLSSNFNIVHVKDSDNIIHLT 345 >UniRef50_B0SYA7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0SYA7_CAUSK Length = 325 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 81/329 (24%), Positives = 125/329 (37%), Gaps = 23/329 (6%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M TD + +A W L G+ V+ + W + A+ +L Sbjct: 1 MTHSQTD-----IEAAIDWLVRLQGDAVTESDWRDFDAWLTASPAHAEAYDAALAFDQRL 55 Query: 61 GGVPGDVASRALHDT---------RLTRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRA 109 + +A RA R TRR + + G L A Sbjct: 56 D-LDARLADRASESAPPVAKVIPLRPTRRAWLWPAAAAVAATFVAGAVLLPGALMGEREA 114 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 Y T G LEDG+ + LN S VRF+ H R VRL E AKD RPF Sbjct: 115 TYVTGVGEHKTIALEDGTRIELNAASRLTVRFERHARRVRLGDAEAFFDVAKDPR-RPFL 173 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA-SAPAQKRIVNAGESLQFSAS- 227 + Q+ +GT+F VR++D + VQ+ VEV + A + G+ L Sbjct: 174 IEAGDTQVRVVGTQFDVRRRDGRVAVAVQRGLVEVRPDLQSGATPFRLRPGQGLSHEEGR 233 Query: 228 --EFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTF 284 + DE W + L + D+PL E++ L R ++ D A +RLSG Sbjct: 234 ADDARVAAVAVDEVMGWRQGRLIYRDRPLSEIVRDLNRLFPRPVKLGDDRAADMRLSGVL 293 Query: 285 PLKNTDAILNVIAQTLPVKIQSITRYWIN 313 + A+++ ++ LPV+ + + Sbjct: 294 IVDEQGAMVDRLSHLLPVRTTTTDDAIVI 322 >UniRef50_D0XU60 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XU60_9CAUL Length = 337 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 84/340 (24%), Positives = 131/340 (38%), Gaps = 33/340 (9%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M LTD Q A+ W+A L + +Q W E D ++ A++ +E L L Sbjct: 1 MTAPLTDPISQV---AADWFARLRDDDADLDAWTTFQAWLEADPAHRLAYEAMETLWLDL 57 Query: 61 GG--------------------VPGDVASRALHDTRLTR---RHVMKGLLLLLGAGGGWQ 97 P A+ A R +R R + L+ G Sbjct: 58 EDDAPQALLNAAGATATVETLTRPSGPATPAPTPARASRPGHRRPIPWLIASGAIAAGLV 117 Query: 98 LWQSETGEGLRA--DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEI 155 W + + A DY TAKG V L DGS LTL + V +A +R V L GE Sbjct: 118 AWVAASRWSPSAPIDYATAKGEVRAVTLVDGSRLTLGGATRITVEMNARRRAVTLSEGEA 177 Query: 156 AITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRI 215 A +A RPF V ++ LGTEF + + T + V++ V V A + Sbjct: 178 TFDVAHEA-NRPFVVELGDQRVRVLGTEFNISRDQGHTAVTVRRGVVAV--AQVGGGEVR 234 Query: 216 VNAGESLQFSASE--FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDP 273 + G+ + + + D +W L + PL V+A RY +R DP Sbjct: 235 LTRGQQVLHAEGSTVQEVREADPDAVFAWRSGKLIYDKAPLAMVVADFNRYGGPPIRVDP 294 Query: 274 AVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWIN 313 + A + +SG F + + A++ +A+ + + I Sbjct: 295 SAAKVTVSGVFLVDSPRAMVERLARFSGLTVVVRADEIIL 334 >UniRef50_Q3HKE5 FecR protein n=3 Tax=Rhodobacter sphaeroides RepID=Q3HKE5_RHOS4 Length = 324 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 24/332 (7%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M + Q A + L G +S + Q W E+D + AW +VE L + Sbjct: 1 MTGDRHPTEPQ-RAKARDLFVRLRGRALS---KRELQVWLEEDPAHVAAWAEVEALWGET 56 Query: 61 GGVPGDVASRAL--------------HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG 106 +A R+ R + L L +G GG W L Q + Sbjct: 57 RAPGERLAEAEAGALSVYLAAMDRGARRRRVLRGGTVAVLALAIGLGGLW-LRQPHLLQD 115 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 L ADY +A+G L DGS + L+ SA V D R +RL G + + R Sbjct: 116 LGADYASARGERRSVSLPDGSRVLLDADSAIRVDMDGPDRLLRLLRGAASFEVTRSP--R 173 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA 226 PFRV +G++T GT F VR ++ Q+ ++Q V V P ++ + GE Sbjct: 174 PFRVRFGKGEVTVHGTVFDVRLLEDGGQIVLRQGRVSVRYPGLPVEQ-PLVPGEQFSVDG 232 Query: 227 SEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTF 284 +V+ +D E++ W +F LG+++ATL RY G + + R+SG+ Sbjct: 233 PGRPSVEAVDLAEASGWQDGRFAFYRMRLGDLVATLERYLPGHILIASRDLGDRRVSGSL 292 Query: 285 PLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 L + +A L + T+ + I + + P Sbjct: 293 DLDHPEAALESLRDTVGLTITRLPGSVRILRP 324 >UniRef50_B3PLQ9 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PLQ9_CELJU Length = 322 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 90/325 (27%), Positives = 141/325 (43%), Gaps = 20/325 (6%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 +TD++ ASHW+A++ VS Q+ +QQWY D ++ A+ +++L Sbjct: 1 MTDTQIAIDEQASHWFALMLEPPVSASQQQAFQQWYNSDPRHRQAYSALQSLWRDSAVAL 60 Query: 65 GDVAS-------------RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADY 111 A+ R L +R L LW + ADY Sbjct: 61 AVPAANDDTSIGVSGAGGRRLSQAWYRQRPWQALTGLAACLFLAVVLWPF----SISADY 116 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT G L DGS LN+ SA V + +R + + G++ A + QRPFRV+ Sbjct: 117 RTGIGQQQVVLLPDGSRAHLNSDSALAVHYSDKERRLEVLSGDVWFDVAPNP-QRPFRVM 175 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 G+ ALGT F V Q + V +H V V L +RI+NAGE L + A F A Sbjct: 176 AAGGETVALGTAFAVSLQPRGADVVVTEHQVRVSLEGDSQNQRILNAGEGLSYRAGSFSA 235 Query: 232 VKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTFPLKNT 289 + D+ SW L F ++PL EV+A L + G + ++A +++ + Sbjct: 236 IGVADESLLLSWRNQQLVFLNQPLIEVMAILEHWHPGKLVLLGDSLAQHQVTLILDTRQP 295 Query: 290 DAILNVIAQTLPVKIQSITRYWINI 314 + +L+ + Q L +K S+ I Sbjct: 296 EQLLDKLVQGLNLKTFSVAGKLTFI 320 >UniRef50_A6T0L2 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0L2_JANMA Length = 333 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 66/337 (19%), Positives = 131/337 (38%), Gaps = 28/337 (8%) Query: 1 MNPLLT-DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M+ + + A W L ++W + A++Q + + ++ Sbjct: 1 MSEQPSHRIPDELELQAHAWLRRLKSGSARAADAQALRRWCATSAAHARAFEQAQRMWDE 60 Query: 60 LGGVP-----GDVASRALHD-------TRLTRRHVMKGLLLLLGAGGGWQLWQSETG--- 104 L GD AL + ++RR M G L A Sbjct: 61 LLPAAVLAGTGDAELTALRNKQSRKQTPGMSRRAFMGGALATSCATIAGVALIHPPLDLW 120 Query: 105 ----EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVR-FDAHQRTVRLWYGEIAITT 159 + RAD+RTA G L G + +NT+SA V+ + L GE+A+ Sbjct: 121 PSVADAWRADFRTAAGEQREIALASGVSVEMNTRSAIAVQTLRGETIGIDLLDGEVAVDA 180 Query: 160 AKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAG 219 +PF V G+ +++ F +R N + V+V ++ + ++ A Sbjct: 181 THR--NQPFVVSAAGGRTSSIDARFELRHMGNAICVTCIDGMVKV---ASGGDEVVLRAA 235 Query: 220 ESLQFSASEFGAVKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAG 277 + + + + A++ ++ ++++W ILSF L +V+A + RYR G + +A Sbjct: 236 QQVTYDSQAIQAIRSINPGDASAWRSGILSFRQTALAQVVAEINRYRPGRVVLMAKGMAD 295 Query: 278 LRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 +SG F +++ D + I + + + S+ + + Sbjct: 296 KPVSGRFHIRDLDKAITQIQRLFKLDVTSLPGGLVLL 332 >UniRef50_Q07HV9 Putative FecR n=2 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07HV9_RHOP5 Length = 333 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 71/329 (21%), Positives = 126/329 (38%), Gaps = 27/329 (8%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV------ 63 R A W L+ ++P+ A ++W ++ A+ + + L + G Sbjct: 9 DPVEREAIDWLERLTSGEMTPEDVAALKRWLAHSARHEAAFVEAKRLWHMAGVAGHSLFD 68 Query: 64 -----PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQS-----ETGEGLRADYRT 113 G + + + +RR V+ G L A + ++ + LRADYRT Sbjct: 69 PDAGFAGRLEALGQRRKKASRRAVLSGGGAALAAASVYGMFNPPLGLWPSLSELRADYRT 128 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRF-DAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 G D + LNTQ++ VR D + + L GE + T A RP VL Sbjct: 129 GTGEQRHVTFADDVTINLNTQTSLAVRPTDGAEDRIELIAGEASFATPARA-ARPLVVLA 187 Query: 173 RQGQLTALGTEFTVRQQDNF----TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 G+ F VR + AV + + G+ ++++ S Sbjct: 188 ADGRTITQSGRFDVRFAAGGERAPVSVTCFAGAVRIERGP---DVTDLQPGQRVRYNHSG 244 Query: 229 FGAVKPLDDESTS-WTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPL 286 V +D + S W + I+ F PL E + + RYR G + + ++ +LSG F + Sbjct: 245 LSEVAAVDPQVASEWQRGIVEFRGTPLVEAVEEINRYRPGRIMLMNASLGHKQLSGRFRI 304 Query: 287 KNTDAILNVIAQTLPVKIQSITRYWINIS 315 + L + + K+Q + + +S Sbjct: 305 DQMNEALLGVERAFGAKLQRLPGGIVLLS 333 >UniRef50_Q0C5P1 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5P1_HYPNA Length = 344 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 131/335 (39%), Gaps = 30/335 (8%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP----- 64 + +A W L P + A + W D + A+++ E L + L +P Sbjct: 9 DRIDAAARSWAVYLHSGDAKPDKIAEFDAWLAADAAHVHAFRRYEKLMSDLVLIPELGEV 68 Query: 65 -------GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQ-----SETGEGLRADYR 112 A R + + V ++++ GGG ++ + + Y Sbjct: 69 GLFEGTRAAPGVIAAKVPRRSSQRVAAFVMMIALVGGGITVFGAGRTFQDASPAMVPGYE 128 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T + QL DGS++TL +S + F R V+L+ GE A D RPF V Sbjct: 129 TTIAEIRDVQLADGSVVTLGARSRIEPTFTDKMRIVKLYEGEAFFDVAPDP-ARPFYVEA 187 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKR---------IVNAGESL- 222 + +GT F VRQ ++ V + VEVL A P + ++ AG+ + Sbjct: 188 GDRLIRVVGTRFDVRQGPETVRIAVVEGVVEVLQADNPRKAEAAREGIAKDVLRAGDEVV 247 Query: 223 -QFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLRL 280 + + E + E+ W + L++ + LGE++A RY + + +A LR+ Sbjct: 248 ARIGSGEKTIGEIEPAEAAPWRRGWLTYENASLGEIVADANRYSPRQIVFEGEGIADLRM 307 Query: 281 SGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 + F ++ D + + T + + +S Sbjct: 308 TAAFSVEKIDQFILGLEVTYDLYADYSEPDRVRLS 342 >UniRef50_Q4KAZ6 Sigma factor regulatory protein, putative n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KAZ6_PSEF5 Length = 315 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 17/317 (5%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQV----ENLRNQLGGVP 64 +Q L A W +L P+Q+A W D ++ AWQ++ ++LR+ +P Sbjct: 2 EQQVLDQALEWLVLLQSGISPPEQQAACLAWRRADPQHELAWQRLAGIGQDLRDSTRSLP 61 Query: 65 GDVASRALH-DTRLTRRHVMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQ 122 A + L + RR ++KG++ L + A W + + L +DY TA G + Q Sbjct: 62 APHARQLLQARSHPGRRTLLKGIVGLGVVAASSWSVRERLLLPQLFSDYHTATGERRQLQ 121 Query: 123 LEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGT 182 L G+ L L+T+++ D + +RL G + +T P +V T G + L Sbjct: 122 LAAGASLQLDTRTSLDQKASPQGLQLRLNSGRLLLTLG---NAAPVQVTTTDGHIQ-LAP 177 Query: 183 E----FTVRQQD-NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 +V N T++ + + V A APA ++ G+ + + A+ + Sbjct: 178 RSQLILSVGLPGINGTRVQLLAGSGSVSTAHAPA--LSLDPGQQVDIAQQRISALAAVPT 235 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 + +WT+ +L +PLGEVIA L RYR G+LRC +AGLR+SG+F L DA L ++A Sbjct: 236 TANAWTQGLLIAERRPLGEVIAELDRYRPGLLRCSAEIAGLRVSGSFSLDQPDASLELLA 295 Query: 298 QTLPVKIQSITRYWINI 314 +TLP++I+ + YW ++ Sbjct: 296 RTLPIRIRRVMGYWASV 312 >UniRef50_A4C3P5 Putative regulatory protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C3P5_9GAMM Length = 348 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 125/344 (36%), Gaps = 34/344 (9%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN + R + A++W +L + S Q + +Q W EQD +Q A+ +++ + Sbjct: 1 MNKITIPERNRIADEAANWLLILDEDN-SKQTQQAFQVWLEQDAHHQQAFSKLQIMWGLA 59 Query: 61 GGVPGDVASRALHDTRLTRRHVM-------------------KGLLLLLGAGGGWQLWQS 101 +P D + T + LL+ + Q Sbjct: 60 VDLPTDCLTELPQPITRTWWQTLRHTIKNRLALTPLIWPVGSAAFALLVATFSFIAINQP 119 Query: 102 ETGEGLRAD----------YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLW 151 + + Y+T + L DGS +TL S V F +R + L Sbjct: 120 QQIDNTLTTQIVAIEDPIIYQTTTASHQSWLLADGSQITLGADSKISVVFKPKKRAIELL 179 Query: 152 YGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPA 211 G AKD +RPF V TA+GTEF V+ + + V + V V+ A+ P Sbjct: 180 QGIAVFKVAKDP-KRPFVVSHHGHSATAIGTEFVVKAHLSHVSVAVLEGKVAVMAANNPN 238 Query: 212 QKRIVNAGESLQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVL- 269 + GE + +P + + W +L + D PLGEV+ + R+ + Sbjct: 239 G-LTLELGEQAELDQHSPLTKQPYNLQQELEWQSPLLEYHDVPLGEVLHDIRRFTTLNIY 297 Query: 270 RCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWIN 313 D +A + SG + L+ + + + + I Sbjct: 298 LADNDIAAYKYSGQIHHDKVEQWLSALPHLYQINLVKVDNTRIL 341 >UniRef50_D1B2C8 FecR protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B2C8_SULD5 Length = 319 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 125/321 (38%), Gaps = 22/321 (6%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MNP L AS++ + + +Q+ + W +Q ++ A++ V+ L + Sbjct: 1 MNPTLDK-------EASYFLTCMKDG-FTQEQKEAFALWIKQSPLHEKAFEDVKKLTSFY 52 Query: 61 GGVP--------GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYR 112 +P V + + RR V+ LL ++ + Y Sbjct: 53 RALPQNKQTEVIEHVHAEIKRERIFKRRRVLAMAASLLIFFCAIS-YERYLAFFVPHHYS 111 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T K L D S + L+ ++ A +R + +R V L G++ ++ K+ +PF V T Sbjct: 112 TQK-ERQHIILPDDSTVLLDAKTKASIRCSSSKREVLLEKGKVLLSVTKNPD-KPFWVQT 169 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF--SASEFG 230 + LGT F V D+ + V + V V + GE L + ++ Sbjct: 170 GGISIKVLGTRFEVEHYDDHVDISVLEGIVSVQ-KGEEHLLATLTKGEKLSYLATSDRIL 228 Query: 231 AVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTD 290 K + SW + +L F ++ L I + Y + + P + R+SG+F + D Sbjct: 229 LQKVAPEMIASWKEGVLRFQNETLYSAIDAFSYYHDLNISLQPELENQRISGSFAIDEVD 288 Query: 291 AILNVIAQTLPVKIQSITRYW 311 L +++ + ++ I Sbjct: 289 KFLYALSKIYTLNVRKIGDTL 309 >UniRef50_C6XBX5 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBX5_METSD Length = 331 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 84/332 (25%), Positives = 134/332 (40%), Gaps = 23/332 (6%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 P + + W L+ + + + + QW + ++ AWQ+++ L L Sbjct: 2 PSSSGVFSDIEEALVSWSVKLASGQATERDYEDFHQWRASNPAHEQAWQKLQALEANLVN 61 Query: 63 VPGDV---------ASRALHDTRLTRRHVMKGLLL-LLGAGGGWQLWQSETGEGLRADYR 112 +P A+ RR +K L + L+ G L +Y Sbjct: 62 MPETAKTLAINTLDAASRQRAVHHGRRKALKLLGIGLVLVTSGACFLNDHGPWALETEYA 121 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL----QRPF 168 G + L DG+ L LNT + V + +R + L GEI I T D+ R F Sbjct: 122 VPIGKKMQLDLADGTRLMLNTNTRIKVHYSLLKREIVLTSGEIYIATGSDSEGPWAHRSF 181 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 V T L ALGT+FT Q T+L V + AV + AQ V+AGES A+ Sbjct: 182 WVQTPNASLEALGTQFTADQNKQRTRLHVIESAVAI----HGAQTLNVHAGESYDIYAAN 237 Query: 229 FGAVKPLDD--ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPL 286 +K D + T W +L L + L+RY+ ++ D VA + +SG F L Sbjct: 238 QDPIKTADTHFDPTGWMDGVLVAKGMRLDNFASELSRYQAVHIQMDSEVAAMTVSGVFQL 297 Query: 287 KN---TDAILNVIAQTLPVKIQSITRYWINIS 315 L +A++LP+K+ ++ + I Sbjct: 298 NQQYPAVHALRAVARSLPIKLSPLSATQLQIE 329 >UniRef50_B0T8M8 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0T8M8_CAUSK Length = 333 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 87/324 (26%), Positives = 140/324 (43%), Gaps = 16/324 (4%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 S +A R A+ W+ L+ + + + W +N+ A++++E++ + G+ D Sbjct: 6 KSAPRATREAADWFTRLNEPPIEVDELEAFSAW-NARPENRAAYERLEDISRAMAGLQDD 64 Query: 67 VASR-----ALHDTRLTR----RHVMKGLLLLLGAGGGWQLWQSETGEGLRA-DYRTAKG 116 R AL R R R V++ +++ L T LRA Y T G Sbjct: 65 PDMRQATAEALQRGRTRRERQARFVVRPRIIIGALAAACVLAAIATSVFLRAPTYSTRVG 124 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 LEDGS + LNT SA VRF A QR V L G+ A +A QRPF V+ Q Sbjct: 125 ESLSATLEDGSRIQLNTDSAVKVRFTAGQRRVDLVRGQAMFEVAHNA-QRPFVVVAGDAQ 183 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP-- 234 + ALGT F VR+ ++ + Q +VE+ S + AG+ L ++ A Sbjct: 184 VRALGTRFDVRRVGQEVRVVLAQGSVEITDRSLSPAPWRLKAGQGLALKPAQSVAAAAKP 243 Query: 235 -LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AGLRLSGTFPLKNTDAI 292 +TSWT L+F PL + +A + RY + P+V + G F ++D Sbjct: 244 VDVPSATSWTVGKLTFQGVPLTDAVAEVNRYSRDKIVLAPSVPGDRLVGGVFTAGDSDDF 303 Query: 293 LNVIAQTLPVKIQSITRYWINISP 316 + ++ +K + + P Sbjct: 304 IAAVSALYRLKAVRQANGDLILQP 327 >UniRef50_B0T5T9 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0T5T9_CAUSK Length = 336 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 70/331 (21%), Positives = 114/331 (34%), Gaps = 21/331 (6%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQV-------- 53 +P T +A+ W+ + + +A Q W D + A+ QV Sbjct: 4 SPAPTPPFEDVHEAAAAWWMRQVSDDWTDADQAGLQAWLAADARHADAYGQVLEAMSAFD 63 Query: 54 --------ENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGE 105 LR QL + R +RR M G L G+ + + Sbjct: 64 DQDDAADLRALRQQLQDSAAPLPGARRSSPRPSRRAWMIGAGALAAGLVGFGVLSRPSPA 123 Query: 106 GLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ 165 + Y G + L DGS L++ A VR H R + L G+ A D Sbjct: 124 RI---YIAPAGAPAEFNLADGSRLSIEGGGAVAVRLGRHARDLELTRGQARFEVAHDK-A 179 Query: 166 RPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS 225 RPF V + A GT F + + + + + + V + ++ GE Sbjct: 180 RPFSVTVGDQVVVATGTMFNIDRLSERSVVSLLEGRVIIHPVRGEGPTLVLAPGEQAVLR 239 Query: 226 ASEFGAVKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTF 284 + D + +W L F D PL E + + RY + D A+A LR++G F Sbjct: 240 PGSLPLRQTADVRSAAAWRNGRLIFDDTPLAEAVERVNRYGANLRLGDEALARLRVTGVF 299 Query: 285 PLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 + A + I LP+ + + Sbjct: 300 KAGDNAAFVEAITAYLPIAARRGADGRTALV 330 >UniRef50_B4EXQ7 FecR-like transcriptional regulator n=4 Tax=Proteus RepID=B4EXQ7_PROMH Length = 337 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 121/311 (38%), Gaps = 7/311 (2%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 S++ A+ W+ +++S QQ ++QW D+DNQ A+Q + + + +P Sbjct: 27 SQQSIDEQAALWFTRQHSQQMSSQQRQAFKQWV-ADKDNQQAYQAIAEIWHSCEALPRPT 85 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 R + L + + + L DGS Sbjct: 86 IVPIEKRKSSLWRPFIHTTAALCLVAVLYLPYSHLPALLMDNMTLATSNFPKEMTLADGS 145 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 + LN + V + QR + L GE + RPF V + + +GTEF V Sbjct: 146 KVFLNRNTQVRVSYVQTQRRLWLDKGEAYFKVKPNPY-RPFYVHADERLIKVVGTEFEVS 204 Query: 188 QQD-NFTQLDVQQHAVEVLLASAPAQKRIVNAGESL--QFSASEFGAVKPLDDESTSWTK 244 + N + V + VEV A+ + + AG Q + ++F D SW Sbjct: 205 RYQNNQISVAVHEGIVEVK-ATEKSPATYLYAGSQAISQSTDNQFVISSVNADSVGSWRF 263 Query: 245 DILSFSDKPLGEVIATLTRYRNGVLRCDPA-VAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 L F ++PLG+VI L Y + + A VA +++SG + + + + + LPV Sbjct: 264 GQLHFFEQPLGDVITKLKPYLDINVHISSADVAKIKVSGVANINDAKSFITALPLLLPVN 323 Query: 304 IQSITRYWINI 314 + + + I Sbjct: 324 VIFTDKNNVLI 334 >UniRef50_B0SVT6 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter sp. K31 RepID=B0SVT6_CAUSK Length = 324 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 122/320 (38%), Gaps = 12/320 (3%) Query: 1 MNPLL-TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 MN + A W + ++ S W E D+ A++ VE + + Sbjct: 1 MNGADGMTASEALRDEAVAWLVRVQSDQASADDWTALTVWLEASDDHLAAFEDVERVSAE 60 Query: 60 LGGVPGDVASRALHDTRL----TRRHVMKGLLLLLGAGGGWQLWQSETGEGLR---ADYR 112 L +++ T RR + + A + + Y+ Sbjct: 61 LTARAAEISPALKPATSRIVPLRRRPALPVWFAAVAAAVVAMVVGPMAWRDYQGAPTVYQ 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T G L DG+ + L+ S VR R V + + AKD RPF + Sbjct: 121 TKPGETREVALADGTRIRLDAASTLTVRLGWRARRVEMADAQATFDVAKDP-ARPFLISV 179 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVL-LASAPAQKRIVNAGESLQFSASEFGA 231 Q+ +GTEF +R D ++ V++ VEV A + AG+SL + Sbjct: 180 GDQQVRVVGTEFNIRHYDKTVRVTVRRGIVEVRQPALGSTPVARLVAGQSLSHVEGAPRS 239 Query: 232 VK--PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNT 289 ++ + + +WT+ + D+ LGE++A L R ++ PA+AG R SG L + Sbjct: 240 IQTATDPNPAFAWTQGRMVCDDETLGEMVAYLNRRYPIPIKVSPALAGKRFSGVLELGDE 299 Query: 290 DAILNVIAQTLPVKIQSITR 309 D ++N +A + R Sbjct: 300 DLVVNRLAGYFSASVHRTDR 319 >UniRef50_B1ZHY6 Anti-FecI sigma factor, FecR n=2 Tax=Methylobacterium RepID=B1ZHY6_METPB Length = 325 Score = 229 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 80/324 (24%), Positives = 146/324 (45%), Gaps = 13/324 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVEN----- 55 M+P +A W ++ +S Q ++ W D N+ AW +++ Sbjct: 1 MSPTQ-KLEDVHAEAAIQWMVEINSGEMSESQVRAFEAWLRTDHANEAAWVRLQEGLMPC 59 Query: 56 -LRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAG--GGWQLWQSETGEGLRADYR 112 + + G + DV S+ L R +RR + GL L+G G G + + AD Sbjct: 60 GIAARSGTMGHDVLSKRLAAGRQSRRTFIAGLAGLIGVGTIGSGIADRFVPLGNILADRF 119 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 T+ G L DGS L L ++SA ++ ++ R V+L GE+ + A A PF + Sbjct: 120 TSTGGQETVALADGSELVLASRSAINIVYETGLRAVQLLDGEVLVRAAPRAT--PFEIRA 177 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 L G F V + + + + AP + + G+ ++F+ Sbjct: 178 GSMALETFGGTFLVEDRAERLAATGVEGSGRIR--HAPGKPESIAPGDMVEFTGGYRRWR 235 Query: 233 KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAI 292 K + +T+W + +L D L + L RY +G+++ DP++A LR +G F L++ +A Sbjct: 236 KVDIEAATAWLEGLLVAKDSDLLAITTRLQRYFSGIIQVDPSIADLRATGVFSLRHPEAA 295 Query: 293 LNVIAQTLPVKIQSITRYWINISP 316 L+ +A++L + + ++R WI + P Sbjct: 296 LDALAESLNLSLTRVSRLWIKLGP 319 >UniRef50_A9CF44 Two component sensor kinase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CF44_AGRT5 Length = 331 Score = 229 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 123/312 (39%), Gaps = 19/312 (6%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV----- 67 A+ W L G P+ +A +++W Q+N+ AW++ + LG V + Sbjct: 16 AEEAADWLLRLQGGATEPRLKAEFERWLAASQENRLAWERTCKIWRNLGLVEPEFKNLWE 75 Query: 68 --------ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 A+ R + RH + + + L ADY+T+ + Sbjct: 76 DAAHLPGKAAINPTRRRWSVRHYAGAAVAAASLCLVVLFIPTFSV-RLEADYQTSTAEMR 134 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 LEDGS + L SA F +RTV++ GE D RPF V + + Sbjct: 135 TITLEDGSTVELAAASALSADFRDGRRTVKVLKGEAFFDVVPDK-ARPFVVEAKNVTVQV 193 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE-FGAVKPLDDE 238 LGT F V D TQ+ + +VE +AP + GE L A+ ++ Sbjct: 194 LGTAFDVDLTDGVTQVALAHGSVEASFRNAP--PTRLVPGEMLVVDAAGAIRKENVPVED 251 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTDAILNVIA 297 W K L D +G V+ + RY L D +A +++G + L++ D L + Sbjct: 252 IGGWRKGELYVVDATIGSVVEQIQRYHPAWLTMADKRLAEQKVTGFYDLRDPDRALEALV 311 Query: 298 QTLPVKIQSITR 309 + K+ +I Sbjct: 312 EPYSGKVHAIGG 323 >UniRef50_Q2KUB5 Heme uptake transmembrane sensor n=2 Tax=Bordetella avium RepID=Q2KUB5_BORA1 Length = 307 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 138/308 (44%), Gaps = 13/308 (4%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVA 68 R+ R A+ W L+ + S A ++W D ++ AWQ + + + LGG+P + Sbjct: 8 DRRVAREAARWLMHLASGQASADDAAACERWRASDTRHEQAWQHAQRVNDLLGGLPPQLL 67 Query: 69 SRAL-HDTRLTRRHVMKGLL-LLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDG 126 L TRR +K + + LG W W+ GL ADYR+A G L G Sbjct: 68 HATLGRPAHKTRRLALKAMAGMALGTPAAWAAWRGGRETGLLADYRSAPGERRDIVLPGG 127 Query: 127 SLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTV 186 + ++LN+ SA D+ D L GE+ + + QGQ+TA + + Sbjct: 128 TFVSLNSGSALDLSDDGA----VLRAGEVYVRAGLRCVA-----HAPQGQVTASHARYAL 178 Query: 187 RQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDI 246 R +++V + V+V A A + F A + +W + + Sbjct: 179 RLDAEGCRIEVYEGQVQVRPALGVAATLAAPQ--AACFDAYTVRLRSAALESEPAWLRGV 236 Query: 247 LSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 L + PL A L RYR G++RC AVA L +SGTF L NT+ IL + LPV ++S Sbjct: 237 LHVNAMPLAAFAAELGRYRRGLVRCAQAVAALPVSGTFQLDNTEGILRALPALLPVSVRS 296 Query: 307 ITRYWINI 314 T YWI I Sbjct: 297 RTPYWIVI 304 >UniRef50_B1ZTJ9 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTJ9_OPITP Length = 319 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 116/318 (36%), Gaps = 7/318 (2%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 ++ + AS W A L G ++ A W + +++W + L QL Sbjct: 2 ARDETHERIEEEASLWAARLDGGGMTDADRATLATWLAANPEHRWLLSRYRQLSAQLESE 61 Query: 64 PGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQL 123 + A RR G A + + ++ T L Sbjct: 62 FDALVESATQARATARRRWRIGATG--LAAAAVVAFTAIVATRGGEEFSTGAAERHVAAL 119 Query: 124 EDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTE 183 DGS + LN + V +R VRL GE A + RPF V T G + GTE Sbjct: 120 SDGSRIALNALTELHVDLGKAERHVRLTRGEAWFDVAPEK-ARPFVVETPAGVVRVTGTE 178 Query: 184 FTVRQQD-NFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD---DES 239 F +R + ++ V + V V A+A + + + G+ + + + Sbjct: 179 FNIRARPKGAVEVTVLEGRVRVQPAAAASSETALEIGQQALVTTAALDVHRVEPGALQNV 238 Query: 240 TSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQT 299 +W + F D PL E + Y + D VA RL G + L + + +L I + Sbjct: 239 LAWREGQAVFEDTPLSEALERFAAYHGRTVEVDGRVADRRLGGRYSLDDFEGLLEEIERV 298 Query: 300 LPVKIQSITRYWINISPL 317 LPV++ + + P+ Sbjct: 299 LPVRVLRQPDGVVRVVPI 316 >UniRef50_B8H3N4 FecR family protein n=3 Tax=Caulobacter RepID=B8H3N4_CAUCN Length = 307 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 112/304 (36%), Gaps = 6/304 (1%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ--LGGVPGDVA 68 + + A+ W A P ++ W D N A++QV L Sbjct: 3 RIAQEAALWAARRLDADAQPD--PAFEAWKAADPANARAYEQVWRASQDPALSEALRVSE 60 Query: 69 SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSL 128 R R R V+ G LL G ++ +TA G L DG+ Sbjct: 61 QRRAAPRRAWRAPVLAGGLLACGLAVFIAWPYAQVMTVQPQVIQTAPGQQRVVALADGTQ 120 Query: 129 LTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQ 188 +TL+ + DVR +R V L GE A DA RPF V +G LGT F + + Sbjct: 121 VTLDGATRLDVRLGTGRRQVELVRGEAFFDVAHDAR-RPFIVQAPEGSARVLGTAFDLER 179 Query: 189 QDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILS 248 D +L V++ V + + + G+ AV+ D ++ W L Sbjct: 180 GDGRLELSVRRGKVRLAPTGVIRRTAELTVGQRAFAKEGRLSAVRTFDPQADDWRTGWLE 239 Query: 249 FSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 L ++ L R + + DPA+ R++G F L + +A+ +A I+ Sbjct: 240 TDGVTLARLVERLNRASDKPITIIDPALGRQRVAGRFRLDDPEALARNLALMHGFTIRET 299 Query: 308 TRYW 311 + Sbjct: 300 SNGL 303 >UniRef50_B2HV65 Fe2+-dicitrate sensor, membrane component n=5 Tax=Acinetobacter RepID=B2HV65_ACIBC Length = 338 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 24/330 (7%) Query: 9 RRQALRSASHWYAVLSGERVSPQ--QEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 Q + A+HW LS + + + + ++++W + + ++ +E + + Sbjct: 8 HHQLVEEAAHWIVQLSSDDENSRKTAKQKFEEWKKTSEQHRQVAADIEQCIGSIQKLSQT 67 Query: 67 VASRALHDTRLTR-----------RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 + + + L R ++ + G T + AD + Sbjct: 68 IGHKKVTKVALKAGLNSGKAYKHLRAGTAFAVVFVAMSGALFYLTDTTVAYVTADIQGHS 127 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G + Q L DGS L L +SA ++ F +QR V L G+I + AKD RPF V T G Sbjct: 128 GQWTTQTLPDGSRLILRGKSAVNLDFKTNQRVVELVQGQIYVDVAKDKT-RPFLVKTSHG 186 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS------APAQKRIVNAGESLQFSASEF 229 ++ ALGT F+V + T+L++ V+V ++ IV AG++++ + Sbjct: 187 KIQALGTAFSVTYDPSATELNMLHSKVKVEATQVKTTQLHTTRQAIVEAGQAIKMDQNGV 246 Query: 230 GAVKPLD--DESTSWTKDILSFSDKPLGEVIATLTR-YRNGVLRCDPAVAGLRLSGTFPL 286 + L+ +E W K L + PL +V+ L R Y+ ++ D A+ +R++ PL Sbjct: 247 QKLPALNVYNEQQKWQKHQLMVENLPLNQVLQELDRNYKGKIIFNDAALQHVRVNAVLPL 306 Query: 287 KNTDAILNVIAQTLP-VKIQSITRYWINIS 315 T L ++A P +KI+ IT + + +S Sbjct: 307 DQTTESLKLLATVFPDLKIKQITPFVVMVS 336 >UniRef50_C6X7E8 Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7E8_METSD Length = 335 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 78/328 (23%), Positives = 140/328 (42%), Gaps = 19/328 (5%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + + Q ++A W+ L + + ++++QW Q +Q A++QV L + Sbjct: 1 MAANREHQLRQAAIRWFVRLQTAAMDDPERSKFEQWLLASQAHQQAYEQVATLWERFDSA 60 Query: 64 PG----------DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQ----SETGEGLRA 109 P + ++ V L + G +Q + L+A Sbjct: 61 PALENLADAMEQQAYFKKPQRNGRIKKTVAGVLSAAVLVFGLTHGYQEYERWQAAPVLQA 120 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 + G +SRQ+L+DGS LTLN+ S A+V F +R V L GE A+D RPF Sbjct: 121 VAQAGFGQISRQRLQDGSELTLNSGSDAEVTFYRDRREVHLKRGEAIFDVARDPD-RPFI 179 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF-SASE 228 VL+ ++T GT F V + ++ V V+V + A + GE + +A+ Sbjct: 180 VLSGNARVTVYGTRFAVNRLQRLVRISVDHGLVKVEPQNTTASPLWLRKGEVAEVPNAAA 239 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLR--LSGTFPL 286 ++ S+T+ ++SF L E++ TL+RYR L+ A+ ++ Sbjct: 240 PLRSSHQAADAFSFTQGMISFDHADLSEIVETLSRYRRPPLQLQAALQHSPAQVTAVIKT 299 Query: 287 KNTDAILNVIAQTLPVKIQSITRY-WIN 313 +N + ++ + Q PV+I W+ Sbjct: 300 RNIEKFISQLPQLAPVRIDHRDDSAWVV 327 >UniRef50_B0KIQ3 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIQ3_PSEPG Length = 317 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 109/322 (33%), Positives = 170/322 (52%), Gaps = 10/322 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ L +R +LR A+HW++ L+ V + WQ W N WAWQQ E L+ ++ Sbjct: 1 MSVHLDAEQRASLRQAAHWFSQLNSGDVQASDYSAWQLWLNATPVNSWAWQQAERLQTRM 60 Query: 61 GG----VPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQL-WQSETGEGLRADYRTAK 115 V + A H +RR V+K L+LLG G ++ AD RT Sbjct: 61 AASENPASARVLALAAHGRHASRRRVVKAGLVLLGGGALSLGGYREVKQSAWLADVRTGV 120 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G L +G+ + LNT SAADV +RL GE+ +T ++ +V+TR G Sbjct: 121 GEQRSLLLNNGTAVVLNTASAADVGDLREAPWLRLRQGELMVTV---PARQTCKVVTRNG 177 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 + A + F VR ++ + L+V +V LAS Q + +G+ QF+ F +V+ + Sbjct: 178 TIEAGESRFAVRLFEDSSSLEVFAQQAQVKLAS--GQTLQLASGQRCQFNEQGFSSVEAV 235 Query: 236 DDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNV 295 + +W + +L +D+ L IA L+RYR G LRC +VAGLR+SGT+ L +TD IL Sbjct: 236 ALAADAWGQGLLIANDQRLDTFIANLSRYRPGWLRCAQSVAGLRISGTYKLSDTDQILRA 295 Query: 296 IAQTLPVKIQSITRYWINISPL 317 +A +LPV++Q+ TRYW+ ++ + Sbjct: 296 LATSLPVQVQARTRYWVTVTAV 317 >UniRef50_B4WBG4 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBG4_9CAUL Length = 331 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 121/320 (37%), Gaps = 12/320 (3%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 + R A+ W+A L+ +RV+ + QW N A+ ++E + G + G Sbjct: 4 DNDLDVRRREAASWFATLNQKRVAASDITAFSQWRRT-PANAEAYARIETMWEAAGSLKG 62 Query: 66 DVASRALHDTRLTR---------RHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKG 116 D AL R R + + A + Y T G Sbjct: 63 DADIAALTAGARARADASRKLQGRLAKGLIPIGAVAAVAAVVVGVTMWSARPLSYETGLG 122 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 L DGS +TL+T+S VR +R V L G+ D RPF V Sbjct: 123 ERRIVVLADGSKVTLDTESRITVRLTGRRRAVELASGQAFFDVEGDP-ARPFVVRAGATD 181 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 +TA+GT F VR+ Q+ + + V+V+ + + G+ + ++ Sbjct: 182 VTAVGTRFDVRRAGGGAQVTLVEGKVDVVDRGQATPRWSLAPGQQIVTASPRPAVRSVDA 241 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAILNV 295 TSWT L F+ + +A + RY + D PA+A + +SG F + + ++ Sbjct: 242 ASETSWTSGRLIFAGDTVEAAVAEVNRYTASKVVLDAPAIADIAVSGAFNTGDVEGFVSA 301 Query: 296 IAQTLPVKIQSITRYWINIS 315 + + PV I I Sbjct: 302 LTELYPVVADRTASGQIVIR 321 >UniRef50_A5V4S3 Anti-FecI sigma factor, FecR n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4S3_SPHWW Length = 318 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 124/313 (39%), Gaps = 18/313 (5%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 + ++ +Q A+ W A + P +EA + W D A Q + + L Sbjct: 1 MTRETAQQIEDKAADWVARMHSATWGPDEEAELKLWLAADPRRDGALLQAQAALSMLTSA 60 Query: 64 PGDVA---SRALHDTRLTRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 + A RL+RR M G + G +++ + Y T G + Sbjct: 61 DTGIFGENPPAEPRRRLSRRSFMGFGGAAVAASLGVAAVVFRGTS-------YVTDVGEI 113 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 R L DGS +NT SA + +R V++ GE AKD ++RPF V + ++ Sbjct: 114 RRIPLADGSTAAINTDSAIAINLQRSKRLVKVDKGEAWFQVAKD-VERPFEVEAGRIRVR 172 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 A+GT F+VR+ + + V + V+ A Q ++AG+ + P + Sbjct: 173 AVGTAFSVRKLETGAGILVTEGTVDAWADGAEGQMIRISAGDGAFIGNNAAVERVPPEAS 232 Query: 239 ----STSWTKDILSFSDKPLGEVIATLTRYR-NGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 + +W + +PL E ++ RY ++ DP + + G F + Sbjct: 233 GVDRALAWRSGKIDLVGQPLSEAVSEFNRYNKRKLVIVDPKLLNEQFDGVFRTDDPAGFA 292 Query: 294 NVIAQTLPVKIQS 306 ++ +L V I + Sbjct: 293 EMVKNSLSVPIDT 305 >UniRef50_C1DGN9 PupR/FecR-like anti-sigma factor protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGN9_AZOVD Length = 324 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 162/323 (50%), Gaps = 9/323 (2%) Query: 1 MNPLLTDS-RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M+ + + A W L+ + +Q W+E + ++ AWQ+V++L+ + Sbjct: 1 MSRTPQEPLPEAVIEQAIDWAVRLTYGEADASTRSAFQVWHEASEQHRQAWQRVQSLQGR 60 Query: 60 LGGVPGDVASRALHDTR----LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAK 115 GVP D+A +AL R+ LLL W + + L AD+ TA Sbjct: 61 FAGVPADLAMQALSKLPKVHLRRRQLGKLTLLLGALGATTWGAGEVTPWQRLLADHSTAI 120 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ---RPFRVLT 172 G R +L DGS L LNT SA + FD+ QR +RL GE+ + + D Q RP RV T Sbjct: 121 GERRRWRLADGSQLDLNTDSAVSLHFDSEQRLLRLLRGELHLISGSDTGQFAERPLRVQT 180 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 R G L ALGT F+VR + T+L V++ AV + A + RI AG+ ++ + Sbjct: 181 RDGLLEALGTRFSVRLDEQATRLAVEEGAVSLRPADGS-ELRIAGAGQQWLLNSGLALRL 239 Query: 233 KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAI 292 W L + PL E++A L+R+R+G L CDPA+A +SG F L + DA Sbjct: 240 PQSHSAPNGWLDGQLIARELPLEELLAELSRHRHGYLGCDPAIARRPISGNFQLSDIDAT 299 Query: 293 LNVIAQTLPVKIQSITRYWINIS 315 L+ IA++ +++ +TRYW+ + Sbjct: 300 LDFIARSHDLRLYRLTRYWVRLG 322 >UniRef50_Q7WEI1 Heme uptake transmembrane sensor n=2 Tax=Bordetella RepID=Q7WEI1_BORBR Length = 305 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 90/304 (29%), Positives = 126/304 (41%), Gaps = 7/304 (2%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 R A+ W L + S + W +++ AWQ+ L + +P V AL Sbjct: 2 AREAARWLVRLGSGQASADEIQACDHWRASHAEHERAWQRARRLTSMFDRIPPAVGQAAL 61 Query: 73 HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLN 132 R R + + +L W + G AD RT G L G+ L LN Sbjct: 62 GRARDRRAMLKSLVAMLAAPPAAWAALRGARNSGWLADLRTGTGETRTVALGPGTQLRLN 121 Query: 133 TQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF 192 T +A + + ++RL GEI + RP RVLTR G + +RQ D Sbjct: 122 TGTAVSLDDGSGMLSLRLHRGEIYLE-----ADRPCRVLTRGGMIRTEAAHLWLRQDDAD 176 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDK 252 L V A + V AG+ + + D S W + +L Sbjct: 177 GLLGVVAGL--AFWQGADNRTHSVAAGQRIAWHDGALQGAAQTLDGSPDWLRGVLRADAM 234 Query: 253 PLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWI 312 L + L+RYR G LRCDP VAGLRLSG F L +TD IL + LPV++ +T YWI Sbjct: 235 RLDHFLRELSRYRPGTLRCDPRVAGLRLSGVFQLAHTDDILRALPALLPVQLSYVTPYWI 294 Query: 313 NISP 316 + P Sbjct: 295 TVGP 298 >UniRef50_Q5R0S8 Iron-dicitrate sensor, membrane component n=1 Tax=Idiomarina loihiensis RepID=Q5R0S8_IDILO Length = 319 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 136/323 (42%), Gaps = 11/323 (3%) Query: 1 MNPLLTDSRRQ-ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M + ++ + A+ W LS ++ R+ +W E D +Q ++ + Sbjct: 1 MQETVNNTSQDSIYTEAAEWMDRLSDGELNTLCRKRFIKWLEADVQHQQVFESMLATWQD 60 Query: 60 LGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETG---EGLRADYRTAKG 116 + R ++ G+ L + G E + TA+ Sbjct: 61 -PALEQSFEQLKKRQKRPVKKAFQWGMGLATACALVVAITVMLPGRFSETPQPTVFTAQS 119 Query: 117 TVS-RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 QL DGS L L S V + QR +R+ G+ + AKD +RPF V Sbjct: 120 PTENTHQLSDGSALQLQLSSEVMVNYSEQQRDLRIESGQAYFSVAKDK-KRPFVVSVGDA 178 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPL 235 +TA+GTEF + + + + V + VEV A + ++ AGE ++ S FG VK + Sbjct: 179 SVTAVGTEFNIDRGTDQIDVTVYEGIVEVQ-AEQESFPVLLKAGEKMRLSRGRFGVVKKV 237 Query: 236 D-DESTSWTKDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAIL 293 D + W + S++ L +I L R+ + ++ DP + ++G F L +T+ L Sbjct: 238 DVNNLIDWRSGWIEISNENLTYLIERLNRHSSTPIVLADPNLGSREVAGRFRLNDTEQTL 297 Query: 294 NVIAQTLPVKIQSITRYWINISP 316 +++Q + ++ + + I ++P Sbjct: 298 KLLSQMYALNVEYLPQQ-IRLTP 319 >UniRef50_Q4KD29 Sigma factor regulatory protein, FecR/PupR family n=10 Tax=Pseudomonas RepID=Q4KD29_PSEF5 Length = 316 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 128/318 (40%), Gaps = 10/318 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 ++ + +Q L A W +L+ + + +QW Q + A++Q + L + L Sbjct: 6 ISTPQASADQQLLNEARDWLVLLTSGQATAADARALRQWCGQSPQHAAAFEQTKALWHCL 65 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 + + RR + G L A +L GL AD+ T G R Sbjct: 66 QPA-AALLEQQARPRHFGRRAFLGGALAASAALFMVRLTVPGGFAGLTADFATEVGEQRR 124 Query: 121 QQLEDGSLLTLNTQSAADVR-FDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L +G L LNTQ+ R A ++ + L GE+ LQ P +V +G L+A Sbjct: 125 VDLAEGVSLELNTQTRISRRDLGAGEQGIELLEGEV--EVFSQRLQ-PLKVQAGEGWLSA 181 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DE 238 F +R D+ + + +++V +A + +++G L + G + +D Sbjct: 182 RQARFNLRNTDHQVCVTCIEGSLQVDVA---GRSIGLDSGRQLTYDPRSIGEPQVVDIHS 238 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +W + +L F + L VI+ + RYR G+ + + + ++ F L + +I Sbjct: 239 VIAWREQVLVFDNASLNTVISEINRYRPGMLVLLNAELGKRKVQARFNLNQLAGVALLIR 298 Query: 298 QTLPVKIQSITRYWINIS 315 K + + +S Sbjct: 299 DAYGAKCTELPGGVVLLS 316 >UniRef50_Q1I5S1 Putative FecR-like transmembrane sensor n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I5S1_PSEE4 Length = 320 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 13/321 (4%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQE--ARWQQWYEQDQDNQWAWQQVENLRNQLG 61 + + + ++ A + A L G+ ++ + Q+W + +++ AW++ E + Sbjct: 1 MFEQASPRKVQQALVYLAALQGDDPERVRQLGDQAQRWRGRSDEHERAWREAEQRWQMVH 60 Query: 62 GVPGDVASRALHDT-RLTRRHVMK--GLLLLLGAGGGWQLWQSETGEGLRADYRTAKGT- 117 + + S RR +++ G L L+ GGW W + + +TA Sbjct: 61 RLTPQLRSAVQPHACDTGRRRLLRQGGALALVLGAGGWLGWMFKRTAPFQYGLQTAHAEA 120 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 L DGS L + +S V FD +R V L +G A + RPF V TR G + Sbjct: 121 PRSLTLPDGSQLLVAAESNLRVHFDHGERRVMLLHGNAFFDVAHELW-RPFLVSTRLGLV 179 Query: 178 TALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE----FGAVK 233 LGT FTV + + Q+ V + V+V Q ++ AGE + A Sbjct: 180 QVLGTAFTVSDRGDRVQVAVARGRVQVRGLEGGEQ--VLQAGERICLDGQGQLGTLRAGG 237 Query: 234 PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAIL 293 + W + SF+D+PL EVI L Y + DP + LRL+G+FP + +L Sbjct: 238 AFGPDLAHWQRGWWSFTDQPLSEVIGELNAYVTRPVALDPGASALRLTGSFPSDQPEVLL 297 Query: 294 NVIAQTLPVKIQSITRYWINI 314 + + LPV++ + + + Sbjct: 298 EALPRVLPVRLVEQGGHRLIV 318 >UniRef50_Q82VA6 Putative transmembrane sensor n=1 Tax=Nitrosomonas europaea RepID=Q82VA6_NITEU Length = 408 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 83/367 (22%), Positives = 149/367 (40%), Gaps = 71/367 (19%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD-- 66 + +A+ W ++P++EA Q+W D + A QVE++ +++ +P + Sbjct: 37 QDPLDAAAAGWVVRRQDG-LTPEEEAELQEWLAADPAHARALAQVEDVWSRMDELPDEGV 95 Query: 67 ---------------------------VASRALHDTRLT---------RRHVM------- 83 VA H R + RR + Sbjct: 96 VALKAGLPSHKAGTALPPSVAIPTPVPVAPEPQHHPRPSSSIQPASPGRRSWLIGLGRFV 155 Query: 84 ----KGLLLLLGAGGGWQLWQSETGEG-LRADYRTAKGTVSRQQLEDGSLLTLNTQSAAD 138 + GW W + + + + TA+G + L DGS L L+T + A+ Sbjct: 156 PQITAAAVAFSVVSVGWYGWSTWQHQPTFQQSFATARGEQKKVNLPDGSTLWLDTATRAE 215 Query: 139 VRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQ 198 V +R VRL G+ + Q PF VLT ++T +GT F+VR+ + Sbjct: 216 VALYRQRREVRLTDGQALFAVQSNPDQ-PFDVLTGGTRITVVGTRFSVRRTRSGLG---A 271 Query: 199 QHAVEVLLAS--------------APAQKRIVNAGESLQFSASE-FGAVKPLDDESTSWT 243 + +V V++ + ++AG+S+ A+ G V D + +W Sbjct: 272 EGSVSVVVEEGRVRVASRSAAHKMDSSSSVELSAGQSIIADAAGALGPVNRDDAPAATWR 331 Query: 244 KDILSFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + +SFS PL + +A RY + G++ DPAVA L+++G+F L+ A + + LPV Sbjct: 332 EGRVSFSGTPLMQALAEFERYGDTGLVIRDPAVAALKVNGSFDLRQIGAFARALPRVLPV 391 Query: 303 KIQSITR 309 ++ + Sbjct: 392 QLSTRDG 398 >UniRef50_Q3SU82 FecR protein n=5 Tax=Rhizobiales RepID=Q3SU82_NITWN Length = 320 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 77/320 (24%), Positives = 129/320 (40%), Gaps = 7/320 (2%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + + + A L + +P + W + +++ W +V + Sbjct: 1 MS-QTGPDQYRLMDEAIDLVIRLQNDPGNPVATEMVKVWRARSPEHERIWARVAKVHGAS 59 Query: 61 GG-VPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 G + + LTRR+++ G L+ LG G E AD+ TAKG + Sbjct: 60 GKILTQRRKTERREKLGLTRRNLVIGGLIGLGTAGAGYSILPEMLLRGWADHITAKGEIR 119 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 LEDGS++TL SA V F H R V+L G A + QR F V + TA Sbjct: 120 SVTLEDGSVVTLGPDSAIAVDFTTHFRRVQLLAGMSFFDVAAEP-QRAFTVQAAELTATA 178 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAP-AQKRIVNAGESLQFSASE--FGAVKPLD 236 LGT F V + V VE + + A ++AGE + F ++ Sbjct: 179 LGTAFDVAHDAGMLSISVDHGVVEARASGSAIAAGTKLSAGEWVTFDSATYAIERGSREA 238 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLR-CDPAVAGLRLSGTFPLKNTDAILNV 295 + SW +++ + + ++A + R+ G + DP + R+SG F L N L Sbjct: 239 GQIASWRDNLIMAEKEAVSVLVARIGRWIPGRIVMADPFIGSQRVSGIFDLNNPKRALEA 298 Query: 296 IAQTLPVKIQSITRYWINIS 315 + ++ ++ Y IS Sbjct: 299 VVHPAGAHVRQVSSYLTVIS 318 >UniRef50_B0KMC5 Anti-FecI sigma factor, FecR n=1 Tax=Pseudomonas putida GB-1 RepID=B0KMC5_PSEPG Length = 332 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 100/320 (31%), Positives = 152/320 (47%), Gaps = 13/320 (4%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP- 64 + A W+ + +A + W + ++ AW++ L QL + Sbjct: 12 PSLSPKMCEEAMEWWLDMQEANFDSSAQAAFVAWRSEHPLHELAWEKALALGEQLDSLRT 71 Query: 65 ---GDVASRAL---HDTRLTRRHVMKGLLLLLGAGGG-WQLWQSETGEGLRADYRTAKGT 117 D+A RAL +L+RR +KGL LLL A G W SE L ADY T G Sbjct: 72 RGDPDLARRALLLPSQEKLSRRRAIKGLALLLAASAGAWMSRDSEMVSRLSADYTTGVGE 131 Query: 118 VSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQL 177 R L L LNT SA + R H+ +RL GE+ I A + + T Q + Sbjct: 132 QRRVALASDLSLELNTHSAINARATGHRWHLRLLSGEVLIDAALNPA---LYIDTAQVRT 188 Query: 178 TALGTEFTVRQQDNF-TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD 236 A FT+RQ DN TQL V + +++V A + AG+ +F + Sbjct: 189 QASSARFTIRQLDNGSTQLAVYRGSLQVTPTQA-GTWTALQAGQLARFGPLGVLDQGVMQ 247 Query: 237 DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVI 296 S +W + ++ + +PL + L RYR+G L CD A+A LR+ GT+PL ++D +++ + Sbjct: 248 ASSPAWAEGMIVANGQPLQAFLDELGRYRHGYLGCDAALANLRVWGTYPLADSDRVIDAV 307 Query: 297 AQTLPVKIQSITRYWINISP 316 AQTL +++Q TR WIN+ P Sbjct: 308 AQTLQLEVQRFTRLWINLRP 327 >UniRef50_C5SQ91 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQ91_9CAUL Length = 325 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 84/320 (26%), Positives = 126/320 (39%), Gaps = 24/320 (7%) Query: 1 MNPLLTDSRRQA----LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL 56 M R R A+ W L + PQ EA++ W D + A + Sbjct: 1 MTAPTPHWNRHIKLDSAREAAEWLVKLEEGPLDPQTEAQFAVWLSADPAHAAALSRAREA 60 Query: 57 RNQLGGVPGDVAS---------RALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGL 107 Q + + + L R + LL G ++ S T Sbjct: 61 WRQAEALRPGREALMGRQVYGAQVLEPVLSAMRQPLAAAACLLLGISGMAIYGSVTA--- 117 Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKD--ALQ 165 AD RT G V +L DGS LTL+ SA D+ F+ R + L G + A A Sbjct: 118 -ADLRTGPGEVRTFRLADGSQLTLDGNSAVDLAFNTGTRRIALRKGAAYVIAAPRQGAET 176 Query: 166 RPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS 225 RPF V+ R G+ ALGTEF V D ++ V +H V V + ++ G+S+ + Sbjct: 177 RPFVVVARGGESQALGTEFAVEYLDTGVRVTVTEHLVRVS---HDHGQAVLAEGQSVIYG 233 Query: 226 ASEFGAVKPLDDESTS-WTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGT 283 + AV+ + W + F PL +V+A L RYR L +A R+SG Sbjct: 234 LEGWQAVQTAPSLQAATWRDGRMVFDRAPLKDVVAQLNRYRRDRLYIAGTGLAERRVSGV 293 Query: 284 FPLKNTDAILNVIAQTLPVK 303 F ++ L+ I L ++ Sbjct: 294 FDTRDPQNALSSITTGLKLR 313 >UniRef50_B6QYF1 FecR protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QYF1_9RHOB Length = 331 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 75/326 (23%), Positives = 124/326 (38%), Gaps = 18/326 (5%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD 66 + +A W+ +L + + W+ QD +Q AW +V LG + Sbjct: 9 EISSTVEDAAISWFILLGEYPEDLKLWEEFDDWFLQDPTHQEAWLKVSQTSEVLGQLELS 68 Query: 67 VASRALHDT-------------RLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRT 113 + ++ G LL G + Q T L AD++T Sbjct: 69 STEQGSKQGIDVEPAFAFQNFFARSKMFFAAGFSFLLLLYIGLTVPQHLTV-WLYADHKT 127 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 +LEDGS + L+ SA D+ F R V L GE +D +RPF V Sbjct: 128 EVAQTKEVELEDGSTIYLSAYSAIDLDFTDEMRKVSLLRGEALFDVDRD-EERPFVVTAG 186 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVK 233 LGT F V + + + V+ V+V +S + + + ++ ++ Sbjct: 187 DTTTKVLGTRFNVNKGLSAVSVGVEHGHVQVAGSSDVNEVIELRDADWVRMHEDGHPDIR 246 Query: 234 PLDDEST-SWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDA 291 + E +W + L D+ EV+ L R+ + VL DP + R++G F L Sbjct: 247 SPNAEYIAAWQRGKLYVDDQSFEEVLFKLRRFMKTPVLVLDPRINSKRVTGVFDLSKPRQ 306 Query: 292 ILNVIAQTLPVKIQSITRYWINISPL 317 LN I VK+ ++I IS + Sbjct: 307 SLNAIVAAHTVKL-RDFDFFITISKI 331 >UniRef50_B1KES8 Anti-FecI sigma factor, FecR n=2 Tax=Alteromonadales RepID=B1KES8_SHEWM Length = 354 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 129/340 (37%), Gaps = 35/340 (10%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG-D 66 Q L AS W A + ++ ++ QW D +N ++ + +++ + Sbjct: 13 DDEQRLDIASDWIAKM-DRELTAEEREALAQWLHCDVENLHVLLEIAQMWDKMDELGRLS 71 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG----------LRADYRTAKG 116 TR M G+ + L+Q +++ Y+TA G Sbjct: 72 DIFPKAKPTRKKTPVWMGGIAASILLFLSIGLYQFAQDVEPNAQVTGVIAMQSSYQTAVG 131 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 + L D S+L LNT S V++ A++R + L GEI I A D RP VL Sbjct: 132 ESNTINLPDDSILVLNTNSFVQVKYTANERIIELQRGEINIEVAHDK-SRPLSVLAGGKV 190 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP--------------AQKRIVNAGESL 222 + A+GT F V + + +L V V V+ SA V E + Sbjct: 191 IRAVGTAFNVDVRPSGVELIVTDGKVLVVKKSAEAFLKESHADQPKLMGTALAVAKDERV 250 Query: 223 QFSASEFGAVKP--LDDESTS----WTKDILSFSDKPLGEVIATLTRYRNGVLRC--DPA 274 + E + + W L F + L E +A ++RY + D Sbjct: 251 MLNNREPLPSVASKVAPGEIATKLSWRTGNLIFRGESLEEAMAEISRYTDIHFELADDEN 310 Query: 275 VAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 + ++++G F + + +LN++ Q V + ++R I + Sbjct: 311 LKKIKVAGMFKTGDVNGLLNILDQNFNVSHEKLSRNNIKL 350 >UniRef50_B1J3A1 Anti-FecI sigma factor, FecR n=6 Tax=Pseudomonas RepID=B1J3A1_PSEPW Length = 328 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 75/325 (23%), Positives = 131/325 (40%), Gaps = 24/325 (7%) Query: 10 RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVAS 69 ++A W A ++ + A +Q+W D ++ A+ Q + L + +A Sbjct: 9 PDPSQAALRWLARINE-QPEVAHSAAFQRWLLADPRHREAYAQAQALWQKSAAPAARLAE 67 Query: 70 R-----------------ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYR 112 R R + L+L G + L+AD+ Sbjct: 68 EEHADLQRYLDVMAKAPAPPRWWRARARALAVAACLVLAVGVAGGWHPGYWVQDLQADFS 127 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 + + + L D S +TL+ SA V F QR VRL +G PF V Sbjct: 128 S-TDAIRQVTLADQSQVTLDAGSAIAVDFQQGQRHVRLLHGAAFFKVTHTGA--PFVVQA 184 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 GQ+ LGTEF VR+Q Q+ V+ V V A A + + A + L ++ + G Sbjct: 185 AGGQVRVLGTEFEVREQAEGAQVTVRNGRVAVTPAQGQAAR-ELTANQQLAYARGQAGDT 243 Query: 233 KPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTD 290 +D D +W + +++ PL +V+ L RY G ++ D + ++SG+FP++ Sbjct: 244 ASVDSDSRLAWRQGWVNYYQVPLAQVVGDLGRYYPGRIVLLDSELGQRKVSGSFPVREPL 303 Query: 291 AILNVIAQTLPVKIQSITRYWINIS 315 A L+ + + + Q++ I Sbjct: 304 AALDSLGKVMGFSRQTVLGRLTVIR 328 >UniRef50_Q4K5N6 Sigma factor regulatory protein, FecR/PupR family n=10 Tax=Pseudomonas RepID=Q4K5N6_PSEF5 Length = 337 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 91/327 (27%), Positives = 139/327 (42%), Gaps = 25/327 (7%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 MN R +A+ W L +S ++A+ QW D + A L Sbjct: 1 MN-SQGPQERSITEAAADWAVRLYAGGLSATEQAQLAQWQAADPRHPQALVFARQTWEAL 59 Query: 61 GGVP--GDVASRALHDTRLTRRHV-------------MKGLLLLLGAGGGWQLWQSETGE 105 G + ++A+ A + R + +L+ A L + Sbjct: 60 GELRLDPELAATAPPRRQAARPAATIPRPRRRRRLVRAASVAMLVLAVALGWLQGPQALL 119 Query: 106 GLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA-- 163 L+ADY T KG V QL DGS + L++ SA + + +R V+L G A A Sbjct: 120 YLQADYLTGKGEVRTVQLADGSQVELDSGSAIRLDYSGDKRQVQLLAGSAVFDVAPMAGE 179 Query: 164 LQRPFRVLTRQGQLTALGTEFTV-RQQDNFTQLDVQQHAVEVL---LASAPAQKRIVNAG 219 +RPF V + GQ ALGT F V R+ + V QH+V V A A +R++ G Sbjct: 180 EKRPFIVQSAGGQTRALGTRFVVGRESAQQAWVGVLQHSVAVSLDAPAQRGASERVLQEG 239 Query: 220 ESLQFSASEFGAV--KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVA 276 +S+++ +TSW + +L F +PLG V+ L RYR G + + A+A Sbjct: 240 QSVRYDPQSGVVALDGLDLQRATSWRRGVLVFDRQPLGLVVERLNRYRPGRVVLTNSALA 299 Query: 277 GLRLSGTFPLKNTDAILNVIAQTLPVK 303 ++SG F L DA L + Q L V+ Sbjct: 300 QRQVSGVFRLDMLDAALVTLTQELQVQ 326 >UniRef50_A7ADL3 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7ADL3_9PORP Length = 308 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 110/302 (36%), Gaps = 11/302 (3%) Query: 22 VLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRH 81 + + + + +QW D+ N+ + L + L + + + Sbjct: 8 KMFNGEATDNELTQIRQWVNADKMNRETFYHERALFDALQLNAFQKGNHVRKQSVPLWKW 67 Query: 82 VMKGLLLLLGAGGGW----QLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAA 137 + ++ + +S E + G L DG+ + LN +S Sbjct: 68 IGSAAAAVIALFLLYNIPVFTTKSIQPEIALNTIKVPAGQRVEVTLSDGTHIWLNARSEF 127 Query: 138 DV--RFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ-DNFTQ 194 F+ + R VRL GE AKD ++ F V T + ++ LGT+F V +N Sbjct: 128 SYPASFNGNTREVRL-KGEAFFDVAKDRNKK-FIVNTGRCEVEVLGTQFNVEAYNENEFS 185 Query: 195 LDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPL 254 + Q +V+V S P + ++ ++ + + D SW + +++F D Sbjct: 186 TALIQGSVKVTDKSQPDESVVLEPNNTVSLNNGKLTVTPITDFNPYSWKEGLITFKDINF 245 Query: 255 GEVIATLTRYRNGVLRCDP-AVAGLRLSGTFPLKN-TDAILNVIAQTLPVKIQSITRYWI 312 +++ L + + D + SG F + + + +L + Q + + I Sbjct: 246 KDLMKELEKNFGIRIIIDNHTLDNYACSGKFRISDGIEQVLRALQQDAHFTFERESGTEI 305 Query: 313 NI 314 I Sbjct: 306 RI 307 >UniRef50_B6ITM8 Sigma factor regulatory protein, FecR n=1 Tax=Rhodospirillum centenum SW RepID=B6ITM8_RHOCS Length = 340 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 70/334 (20%), Positives = 114/334 (34%), Gaps = 19/334 (5%) Query: 1 MNPLL--TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRN 58 M T + ALR A+ W ++ ++W + N A VE Sbjct: 1 MTGPRLGTPADETALRDAAAWMVRMAAPGSGAADREALRRWLAEHPRNLAAMDLVERSWR 60 Query: 59 QLGGVPGDVASRA---------------LHDTRLTRRHVMKGLLLLLGAGGGWQLWQSET 103 G + G +A + R G L A Sbjct: 61 MAGDLEGTPGVQAERARARRLRLATAADTPRRQRPWRAPAAGAGALALAAALVLALFPPV 120 Query: 104 GEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDA 163 GL A +RTA G L DGS + LNT + + + R V L GE A Sbjct: 121 NYGLDAVHRTAMGQSLETSLPDGSRVRLNTDTELHIDYGWFGRHVALARGEAEFVVAH-G 179 Query: 164 LQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 R F V ++ A GT FTVR T++ + + V +L ++ GE + Sbjct: 180 DPRAFTVSVNGIEVRATGTVFTVRDTGEGTRVFLLEGGVRILNDDDDRTLAVLRPGERAE 239 Query: 224 FSASE-FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSG 282 + +W L F + PL + +A RY + ++ + L +SG Sbjct: 240 LDRTGVVALAPADAAAERAWLAGQLVFRNTPLPDALAEFARYTHADVQVAAPLRDLSVSG 299 Query: 283 TFPLKNTDAILNVIAQTLPVKIQSITRYWINISP 316 + + A L+ +++ PV + + + P Sbjct: 300 VYRATDLQAFLDALSRIHPVGWRQTGPGQVVLEP 333 >UniRef50_A7AIX9 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AIX9_9PORP Length = 313 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 102/287 (35%), Gaps = 15/287 (5%) Query: 25 GERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVM- 83 + S +++ + W E +N+ + + + + +R R V+ Sbjct: 11 DGKASREEKEAVRIWLESSPENEQELFKEREFFDAMILSGSTKVAGMEKKSRPFYRTVLL 70 Query: 84 ----KGLLLLLGAGGGWQLWQSE--TGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAA 137 + + G ++SE G + L DG+ + LN +S Sbjct: 71 EAIKIAAVFAITVASGTYFYKSEICKIGEAMNTITVPAGQRANLTLADGTNVWLNARSEM 130 Query: 138 DVR--FDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDN--FT 193 F ++R + L GE + +PF V T + + LGT+F V + Sbjct: 131 RYPAVFTGNKREITL-DGEAYFEVTHN-EDKPFVVQTNKCNVEVLGTKFNVEAYSDSEDF 188 Query: 194 QLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKP 253 + + +V V P++ ++ + + + D + W + ++ F D Sbjct: 189 CTSLMEGSVRVSDKRNPSETLVLAPNQQVSLINGHLQSKSIADFDPFRWKEGLICFKDMN 248 Query: 254 LGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKN-TDAILNVIAQ 298 E+++ + + +P + SG F + + D L+++ + Sbjct: 249 FKELMSRFEKCYGIHVIIENPKLTDYICSGKFRISDGIDKALHILQK 295 >UniRef50_Q88P46 Transmembrane sensor, putative n=12 Tax=Pseudomonas RepID=Q88P46_PSEPK Length = 351 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 10/311 (3%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ--LGGVP 64 D+R +A+ A W L ++ W +N A+ + E L N L V Sbjct: 46 DARARAMDEALDWLVRLQ--CADAADTQAFEAWLSAAPENAEAYVEAEALWNGTPLHKVA 103 Query: 65 GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLE 124 + + R R K L G + L+AD+ T G R QLE Sbjct: 104 THMHQQQRRSWRGRLRSHWKPLATAALLLVGLFTVGNLP-MRLQADHLTVVGERQRLQLE 162 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DG+ + LNT SA ++ RL GE + Q P V + T+F Sbjct: 163 DGAKVLLNTNSAFASERQDGRQVARLLQGEAYFQV-PEGAQLPLEVEAGPLRAQVRDTDF 221 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLD-DESTSWT 243 VR D Q+ VQ+ V++ Q+ ++AG+S+ FG + D + +W Sbjct: 222 AVRYLDGEAQVRVQRGDVDL--QGERDQRIRLSAGDSISVGPQGFGQRQRPDMHKDLAWI 279 Query: 244 KDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 L F + PL +V+A + RY G + + + + ++G + L L +A Sbjct: 280 DGRLVFENCPLSQVLAEVQRYYPGWIINRNAQLEHVAVTGNYRLDQPLETLRALAHITSA 339 Query: 303 KIQSITRYWIN 313 ++ I Sbjct: 340 QLHEYPALVIL 350 >UniRef50_D0XTD7 Anti-FecI sigma factor, FecR n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XTD7_9CAUL Length = 324 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 113/320 (35%), Gaps = 15/320 (4%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 Q L+ A+ W L V + W + Q A+ ++ + ++ Sbjct: 1 MSRSAQHLQEAADWLTRLQRPEVDETDWLAFDAWLSE-PGAQEAYDAIQAVDEEIFQRGS 59 Query: 66 DVASRALHDTRLTRRH-----VMKGLLLLLGAGGGWQLWQSETGEGLRAD----YRTAKG 116 + R+ + L A L Y TAKG Sbjct: 60 AIRGELAEPRRVAAKRAFSIDWRWLGGLGAAAAAAAVAITVAPWGELLPQPDTLYATAKG 119 Query: 117 TVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQ 176 QL DG+ + LNT S VR + R V + G+ A D+ RPF + Sbjct: 120 ESRALQLADGTHIDLNTDSHLSVRLEKDARRVTVHEGQALFDVAHDS-ARPFLITAGDET 178 Query: 177 LTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF--SASEFGAVKP 234 + +GT F VR++D + V + VEV + G+ L+ AS Sbjct: 179 VRVVGTRFDVRRRDGQLSVTVLRGLVEVST-DGNDTPIQLRPGQMLEHVEGASGVSVRSV 237 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKNTDAIL 293 ++ W L + D+PLG +++ + Y + +R + A LR SG + DA++ Sbjct: 238 AAEDQVGWRSGRLIYRDQPLGRIVSDMNHYFDRPIRLEGENTATLRFSGVLIVDGQDAMV 297 Query: 294 NVIAQTLPVKIQSITRYWIN 313 + +P+ + Sbjct: 298 RRLTSLMPISATPTDDAIVL 317 >UniRef50_Q213I4 Putative FecR n=2 Tax=Rhodopseudomonas palustris RepID=Q213I4_RHOPB Length = 327 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 77/327 (23%), Positives = 131/327 (40%), Gaps = 19/327 (5%) Query: 4 LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV 63 T L A W L + +QW Q ++ A+++ + G V Sbjct: 5 PETPGPDPLLDEAIAWIVRLKTGEPTRADVQALEQWRGQSAAHEAAFKRAARIHRDAGIV 64 Query: 64 PGDVASR---------ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQS----ETGEGLRAD 110 G + +R A R++RR V+ G L + A G + + + L AD Sbjct: 65 AGRLTARSTAPHIVQAAAGRRRISRRFVLGGGLAVAAAAGYAVVQPPLGLWPSLQELSAD 124 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 YRTAKG + Q+ L LNTQ++ +R Q T+ L GE+ + A P V Sbjct: 125 YRTAKGEQRKVQVTPEVSLELNTQTSIALRSQQGQPTIELISGEVLVN-ALRPTSGPLVV 183 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFG 230 L GQ+ A +F D + V+V Q + G+ L ++++ G Sbjct: 184 LAAGGQIGASEAQFNAHCFDAAVSVTCLNGTVDV---QHSGQSVRIGKGQQLSYTSAGVG 240 Query: 231 AVKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKN 288 +D T+W +L F D+PL V+ + RYR G ++ + ++G F + Sbjct: 241 PSMNVDPAQVTAWQSGLLIFRDRPLAAVVEEVNRYRPGKIVIVGAELRWRAVNGDFEINK 300 Query: 289 TDAILNVIAQTLPVKIQSITRYWINIS 315 D+ + + Q + S+ + +S Sbjct: 301 LDSFVTQVEQLFGARATSLPGGLVLLS 327 >UniRef50_Q8PKI1 Two-component system sensor protein n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PKI1_XANAC Length = 349 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 127/346 (36%), Gaps = 41/346 (11%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG-- 65 RQ +A+ W A E + + W Q ++ A+ ++E + G + Sbjct: 2 DSRQIEHAAAQWLARRESEPWDASDQLQLDAWLAQSTAHRVAFLRLEAAWRETGRLSAIA 61 Query: 66 ------------------------------DVASRALHDTRLTRRHVMKGLLLLLGAGGG 95 AS A+ R + + L + G Sbjct: 62 AGLPRGGPPARGRFTGRALPAAARGKSAHARPASHAVQHKRRWKLSLAVALAGGITIAGA 121 Query: 96 WQLWQSETGEGLRA-DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGE 154 L + + + +A Y++ G + L DGS TL + + V H+R + L GE Sbjct: 122 LFLDHAPSAQRQQAHAYQSPPGALRSLSLADGSRSTLGSDTRISVELGRHERHIALQRGE 181 Query: 155 IAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLL---ASAPA 211 AKD RPF V ++ A+GT+F+VR+ + ++ V + V + P Sbjct: 182 AFFEVAKD-RHRPFVVQVGARRVVAVGTQFSVRRDADELRVVVTEGTVRLDADPKDGKPQ 240 Query: 212 QKRIVNAGESLQFSASEFGAVKPLDDES---TSWTKDILSFSDKPLGEVIATLTRYR-NG 267 +V AG E+ W LSF+D PL + +A R+ Sbjct: 241 PPVLVAAGGIAVAGPHGVLVRSSTIAEAEQQVDWRSGYLSFTDAPLRDAVAEFNRFNTRP 300 Query: 268 VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWIN 313 ++ D + LR+ G F +NT+ ++ + P++ +S I Sbjct: 301 LVLADAQLGELRIGGRFSWRNTEGFARLLEHSYPIRAESRAGQMIL 346 >UniRef50_C1DDL2 Anti-sigma factor, FecR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DDL2_AZOVD Length = 323 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 88/326 (26%), Positives = 137/326 (42%), Gaps = 18/326 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M P D+ Q+ A W L ER + + + W D + AWQ+V L Q Sbjct: 1 MKPPRLDAPTQS---AVDWTLRLDPERATSEDRQAFAAWLAADSRHVAAWQRVNGLLQQP 57 Query: 61 ------------GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLR 108 G + + + RR + LL LG G + + GL Sbjct: 58 LADLQRAEVRSPGQLDAAKRALDTPASAQRRRLLGGLSLLALGLSGTAAVDRLAPLHGLL 117 Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 AD+ T+ L DG+ L LN ++A DV F+ +R + L GE+ A D L RPF Sbjct: 118 ADHHTSTAQRKSVTLADGTQLILNARTALDVHFNDARRRIHLHEGELLAQVAADPL-RPF 176 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASE 228 ++T QGQ+ A T VRQ+ + + V + L + +++ G++ F Sbjct: 177 VIVTAQGQVKASETRLLVRQEAGRSLVSVL--RQDAWLQQRDGSETLLHPGQAAWFDERG 234 Query: 229 FGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKN 288 +W++ L D+PLG +I + Y G+LR PA A +R G F + + Sbjct: 235 MRPADASLLTRATWSQGYLESRDEPLGRLIEAMRPYYPGLLRISPAAAEIRTFGIFQVDD 294 Query: 289 TDAILNVIAQTLPVKIQSITRYWINI 314 L +A+TLPV++ S I Sbjct: 295 IQQALRSLAETLPVRVTSYGPLLTTI 320 >UniRef50_Q6NA51 Probable FecR, iron siderophore sensor protein n=2 Tax=Rhodopseudomonas palustris RepID=Q6NA51_RHOPA Length = 328 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 124/313 (39%), Gaps = 16/313 (5%) Query: 15 SASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRN---QLGGVPGDVA--- 68 A W ++ + +QW Q + A+ + L + +P VA Sbjct: 20 EARRWLLRITSGEATAADADALKQWCAQSPSHARAFAEANLLWDNVEAAAQLPSAVASFQ 79 Query: 69 SRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQS----ETGEGLRADYRTAKGTVSRQQLE 124 + +L R +RR V+ + A G + ++ + L ADYRT + Sbjct: 80 AASLGQPRHSRRWVLGAMTATAAAAGAFAVYPPFGLWPSLPELGADYRTRTAERRDIAMP 139 Query: 125 DGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEF 184 DG + LNT+S+ ++ D + ++L GE AI+ Q V G + A +F Sbjct: 140 DGVSIELNTRSSLNIVADQSGQQIQLIAGEAAISCPSRPAQ-SLSVSAGGGVVRAADAQF 198 Query: 185 TVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV-KPLDDESTSWT 243 +R + + ++ V + A Q V G ++ G + +W Sbjct: 199 NIRSDSAGSVVTCRRGVVALDYAE---QSVSVGEGHQASYADGRVGPIVAVEAAAVMAWR 255 Query: 244 KDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPV 302 + L F PL +V+A + RYRNG ++ + A+ + P+ D+++ ++ Q Sbjct: 256 EGQLVFRQTPLADVVAEVNRYRNGRIVLINEALGRRPVEAKIPIDRVDSLIALVQQAYGA 315 Query: 303 KIQSITRYWINIS 315 K+ + + IS Sbjct: 316 KVTWLPGAIVVIS 328 >UniRef50_Q15XS4 Putative FecR n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XS4_PSEA6 Length = 383 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 111/315 (35%), Gaps = 27/315 (8%) Query: 18 HWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG---------GVPGDVA 68 W L S + + W DN+ A+ + + +G D Sbjct: 60 EWLTYLYCGHTSADKREEFVLWLNSSDDNKQAFNHSQKIWQTIGMTDSAAEWIQQHADQQ 119 Query: 69 SRALHDTRLTRRHV--------MKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 + +H + R M + LL G + + + + G + Sbjct: 120 TTTVHQVKPKRIFAKSFLALCAMAASVALLAFNGVFNTTAHLEIPQPQTAFTSPVGQNRQ 179 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS +TL S+ V F +R + L G D R F V +Q Q+ Sbjct: 180 ITLSDGSDVTLAGNSSILVAFSEDERRITLRKGSAYFDVTHDP-SRVFSVTAQQTQVRVR 238 Query: 181 GTEFTVRQQDNFT-QLDVQQHAVEV----LLASAPAQKRIVNAGESLQFSASE--FGAVK 233 GT F V+ N + ++ VQ+ V+V A Q + E L + Sbjct: 239 GTAFEVKYSPNNSLKISVQRGLVDVADLPETAGQREQVLQLRPNEQLHTDIQGRFLSPIT 298 Query: 234 PLDDE-STSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDA 291 E +W + L + + PL VI + RY + V+ D ++ L ++ +F + + Sbjct: 299 VFQPETEFAWLEQRLIYDNVPLKNVIMDINRYVKKPVIILDNSINELPITASFTFEQIEP 358 Query: 292 ILNVIAQTLPVKIQS 306 +L +A P+ + Sbjct: 359 MLEGLASAYPITLTH 373 >UniRef50_C5SN43 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SN43_9CAUL Length = 325 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 8/300 (2%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 A+ W A L + P+ EA +++W E D Q+ + + ++ L Sbjct: 21 DTAAEAAVWMARLKSDCRLPETEAAFRRWLEVTPDAQFLFDEATDVWEMLPSAVP-TRRA 79 Query: 71 ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLT 130 L ++RR + G + + + Y T KG L D S++T Sbjct: 80 RLVSPVMSRRMALVGAMAAAVVVTVGGGVYAVNLRPVV--YETQKGEQRSMSLTDTSMVT 137 Query: 131 LNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD 190 LNT + VR+ ++R V+L GE A D L RPF V TR ++TALGT F VR Sbjct: 138 LNTDTKLSVRYSRNRRYVQLERGEAVFQVAHD-LSRPFVVETRNQRVTALGTVFLVRSDP 196 Query: 191 NFTQLDVQQHAVEVLLASAPAQK--RIVNAGESLQFSASEFGAVKPLDDEST-SWTKDIL 247 Q+ + VE+ + I+ GE V + +W + + Sbjct: 197 TEVQVALFSGKVELRAKQKVSASNGMILKPGERATVREGMTPVVDRPPSDVIRAWQRQEV 256 Query: 248 SFSDKPLGEVIATLTRYRN-GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQS 306 FS L E + L RY ++ D VA L+++G F N++A + +A+ +K++ Sbjct: 257 VFSGVTLAEAVNELNRYSRLQIVVADSGVASLKVAGVFQTGNSEAFVRSMARIHGLKVRQ 316 >UniRef50_Q1YSL3 Putative regulatory protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSL3_9GAMM Length = 348 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 77/348 (22%), Positives = 141/348 (40%), Gaps = 35/348 (10%) Query: 1 MNP-LLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 M+ + DSR + L A W A L +S E Q W D +N+ + Q+ + ++ Sbjct: 1 MSVVHILDSRDRRLNEAGLWIAKLDKG-LSKDDEKSLQHWLAVDAENREVFLQMAEMWDK 59 Query: 60 LGGVP--GDVASRALHDTRLTRRHVMKGLL--LLLGAGGGWQLWQSETGEGLRAD----- 110 + + ++ + R R V+ L+L G W + +A+ Sbjct: 60 MDMLSRLSELFPKTPEKQRRPVRSVLAIAASVLILTVVGLWGMMGISPDISGKANISELA 119 Query: 111 -----YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ 165 Y T+ G S L DG+ L LNT S + + +R + L GE+ + A+D + Sbjct: 120 VVGGIYETSVGEYSIVTLPDGTELVLNTNSLVRMNYTDQRRILLLERGEVHVKVARD-IS 178 Query: 166 RPFRVLTRQGQLTALGTEFTVRQQDNF-TQLDVQQHAV-------------EVLLASAPA 211 RP + ++ A+GTEF V + +L V + V E+LL + P+ Sbjct: 179 RPLSLFAGTQEIRAVGTEFNVEINSDQKIELVVTEGKVLVGVHQQMTKDETELLLVNLPS 238 Query: 212 QKRIVNAGESLQFSASEFGAVKPLDDEST---SWTKDILSFSDKPLGEVIATLTRYRNG- 267 V+ GE++ +++ + +E SW + L F + L + + RY Sbjct: 239 STTSVSEGEAIILGSADEEVDEISPEEIAVKLSWQQGNLIFRGESLAAAVDEIGRYTTVE 298 Query: 268 VLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 + D + LR+SG F + D +L + + + + + +S Sbjct: 299 FVILDENLKKLRISGLFKAGDVDGLLTTLEENFNITHTFGEKGNVILS 346 >UniRef50_A6KXE2 Putative anti-sigma factor n=9 Tax=Bacteroidales RepID=A6KXE2_BACV8 Length = 311 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 105/299 (35%), Gaps = 13/299 (4%) Query: 22 VLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTR-- 79 S Q+ + W E ++N+ + + L + L + + R+ + Sbjct: 8 RFFAGTTSIQEGMDIRAWMEASEENKRIFYKERKLFDALMVHDDQTTNNCISTKRIPKII 67 Query: 80 RHVMKGLLLLLGAGGGWQLWQSETGEG---LRADYRTAKGTVSRQQLEDGSLLTLNTQSA 136 R +K +++ L+Q E G + L DG+ + LN ++ Sbjct: 68 RQWLKIASVIILTLTINYLYQEYKSENEVIAMNTVSVPAGQRTNITLPDGTNVWLNARTT 127 Query: 137 ADV--RFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFT- 193 F QRTV L GE K + PF V T + + LGT+F V + T Sbjct: 128 LQYPVTFSQKQRTVFL-KGEAYFDVTK-KKKTPFIVRTDKYDIEVLGTQFDVDAYPDQTA 185 Query: 194 -QLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDK 252 + + + +V+V P Q + + K D W + ++ F D+ Sbjct: 186 FETTLMKGSVKVTSQHFPEQTITLKPHHKAYVKDGQLAVTKVNDFTPYRWKEGLICFKDE 245 Query: 253 PLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKN-TDAILNVIAQTLPVKIQSITR 309 P ++ +Y + + V +G F + D L V+ + + K + Sbjct: 246 PFQTIMEDFEKYYGIRIIINNKKVLKYSYNGKFRQADGIDYALRVLQRDIHFKYERAND 304 >UniRef50_B4SL41 Fe2+-dicitrate sensor, membrane component n=3 Tax=Stenotrophomonas RepID=B4SL41_STRM5 Length = 326 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 65/334 (19%), Positives = 122/334 (36%), Gaps = 27/334 (8%) Query: 1 MNPLLTDSR--RQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRN 58 M+P R R A W L+ + R++ W E D ++ A+ + Sbjct: 1 MDPDDRPQRPLDAVERQAHAWVVRLTSGEATAADGRRFRAWCEADPLHREAFGRARRQWE 60 Query: 59 QLGGVPGDVASRAL------HDTRLTRRHVMKGLLLLLGAGGGWQLWQS-----ETGEGL 107 Q+ + + A R +RR + + + + + + Sbjct: 61 QVRLAGEQLPAAARQAIAASPAQRWSRRAFLGAAIAAPASLVVVAAIRPPLGLWPSVTAM 120 Query: 108 RADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDAL--- 164 AD+ T G + + L+TQS+ R DA L G+ AI T Sbjct: 121 AADFHTGTGERLQIAPSPQLKIELDTQSSLRRRADAQGEGFELVQGQAAIETQPGLRLAL 180 Query: 165 -QRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQ 223 P V+ +G + VR ++ + + P + + AG+ Q Sbjct: 181 FAGPGCVIADEGAV-----RLDVRNTHGQVRVTCLHGSARIE---HPQGRLQLQAGQQTQ 232 Query: 224 FSASEFGAV-KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLS 281 + G V + + + ++WT+ +L F PL EV+ + RYR G + + A+A +S Sbjct: 233 YDERLSGVVAEAVASDVSAWTEGMLVFRRAPLHEVVDEINRYRRGKVMLGESALARAPVS 292 Query: 282 GTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 G F + + DA L + T+ + ++ + Sbjct: 293 GRFRIDDPDAALEQLRLTMSLDLRRFPGGIAVLG 326 >UniRef50_C5SKV9 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKV9_9CAUL Length = 319 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 11/312 (3%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 ++D + A+ W +S W + + A+ + + L Sbjct: 1 MSDIDAKIEAEAADWVIRAQSGVISELDIIALTDWLDMSPRHARAYAEALTVWGGLDATE 60 Query: 65 G----DVASRALHDTRLTRR-HVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 + R TRR VM + L A + Y T KG Sbjct: 61 PVQTLRSSVRPQTPRNPTRRLGVMAMGVGGLTAVAAGVFLMASGALSPVRTYATHKGERQ 120 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L DG+ L LNT + V+ RTV L GE+++T A +PFR+LT + LT Sbjct: 121 TITLADGTQLRLNTDTHLSVKMTRSARTVTLDKGEVSVTVAH-KADQPFRLLTGKLTLTD 179 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA--SEFGAVKPLDD 237 +GTEF V + + ++ V++ ++ +A A R++ G+ + K Sbjct: 180 IGTEFNVARFNGEVRVAVREG--QIEMADHSAASRLL-PGDLGTYREASGTRQLAKVDPA 236 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 E+ +W + + PL +V A L RY + + A LRL+ L + A+ I Sbjct: 237 EAFAWQSSRAIYRNLPLSDVAADLNRYFEKPIIVEGDAAQLRLNAILTLDSQTAVAGRIT 296 Query: 298 QTLPVKIQSITR 309 + LPV ++ Sbjct: 297 EFLPVDARTTPD 308 >UniRef50_Q1N723 Regulatory protein PupR, putative n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N723_9SPHN Length = 341 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 79/333 (23%), Positives = 132/333 (39%), Gaps = 26/333 (7%) Query: 1 MNPLLTDS----RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENL 56 M DS R A+ A L+ + SP EA W E D + A+ + E Sbjct: 1 MQASEPDSSYAGRDAIEAEAARLLARLNSDP-SPDDEAEICAWIEADPRHAVAFARAEAA 59 Query: 57 RNQLGGVPGDVASRALHD----------TRLTR-RHVMKGLLLLLGAGGGWQLWQSETGE 105 + + A L RL+R V G+ +LL ++ +G Sbjct: 60 WDASERLKSAAADITLPPIQQIISEADQRRLSRNIMVAAGVAILLFVVAAIVTVRTFSGV 119 Query: 106 GLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQ 165 Y T G + LEDGS+L LN+ S + RF ++ R VR+ GE + + D Sbjct: 120 E---RYETGVGQMRDIALEDGSILHLNSDSEVEARFTSNGRKVRVMKGEASFEISHDP-A 175 Query: 166 RPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS 225 RPF V R + A+GT F VR + + +L V V V +P Q+ AG Sbjct: 176 RPFDVEARAAVIRAVGTAFNVRLRPSLVELTVTHGKVTVHCGDSPLQQV--AAGSGAVIQ 233 Query: 226 ASEFGAVK---PLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLS 281 + + ++ T+W ++ + + + RYR + D V+ LR+ Sbjct: 234 PRSISLTRLGPKIVEQRTAWRAQMVELDGETVEQAADEFNRYRKAPILIGDTRVSALRIG 293 Query: 282 GTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 G F ++ L+ + +LP+++ + + Sbjct: 294 GRFRTTDSQEFLSALQLSLPIRVVDGEDGSVML 326 >UniRef50_B8L287 Anti-FecI sigma factor, FecR n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L287_9GAMM Length = 384 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 83/343 (24%), Positives = 135/343 (39%), Gaps = 45/343 (13%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP---- 64 A+ W ++ Q+ ++QW + + A ++E ++LG +P Sbjct: 35 EDPLDAVAAAWMVRRQDG-LTSDQQVEFEQWLASNPTHARALARLEGTWDRLGHLPVGVV 93 Query: 65 ----------------GDVASRALHDTRLTRRHVMKGLLLLLG-----------AGGGWQ 97 A R RR + ++ G W Sbjct: 94 DALRAGLPSPVASAADPSRAQRPAPQVPRRRRSWRPAVSRVISRAAAAAIAFAAMGTAWI 153 Query: 98 LWQSET-GEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIA 156 W + + TA+G +R +L DGS L L+T + ADV R VRL G++ Sbjct: 154 AWNAWQRAPIFEQSFATARGEQTRVELPDGSTLWLDTATRADVSLYRTHREVRLSTGQVF 213 Query: 157 ITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQD------NFTQLDVQQHAVEVLLASAP 210 D PF VL ++T +GT F+VR+ + V+Q V V A Sbjct: 214 FAVHPDREH-PFNVLVANTRVTVVGTRFSVRRTGSALGGSGEVSVAVEQGHVRVAKAQDM 272 Query: 211 AQK---RIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRN- 266 A++ + AG+S+ A + TSW +SFS L + +A RY + Sbjct: 273 AEQGAAVDLLAGQSVIVGAGG-KPGPVGSEVDTSWRDGRISFSGTRLDQALAEFERYGDT 331 Query: 267 GVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 G++ DPAVA L++ G+F L+ A + Q LPV++ + R Sbjct: 332 GLVIHDPAVAALKVQGSFNLRRAGAFARALPQVLPVRLDARGR 374 >UniRef50_Q4KAM0 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KAM0_PSEF5 Length = 314 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 110/305 (36%), Gaps = 5/305 (1%) Query: 14 RSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALH 73 ++A W + +W D+ + AW++ E + GG+ Sbjct: 3 QAAMDWLLQCHSAPDDALLQQAHARWLAADERHAVAWRKAEKVWLLSGGLAPLEPPVPQP 62 Query: 74 DTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNT 133 R + L L A + + G + L DGS + L + Sbjct: 63 LPTPLRARRNRPRRALKALALAACLLLLAGPTPPTA-HTSPAGEHRQVLLSDGSRIELGS 121 Query: 134 QSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFT 193 SA V F+ R V L G+ + DA RPF V ++ +GT F V Sbjct: 122 DSAIRVDFEPGTRAVTLLRGQAFFEVSHDA-SRPFTVQAADVKVRVIGTAFDVDLSRTAV 180 Query: 194 QLDVQQHAVEVLLASAPAQKRIVNAGESLQ--FSASEFGAVKPLDDESTSWTKDILSFSD 251 + VQ AV+V + G+SL+ + L + W + L +D Sbjct: 181 VVAVQSGAVQVRDGRGELAVPALGPGDSLRLGLDQGPPQRGRLLPGQVAPWRQWQLLVND 240 Query: 252 KPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRY 310 +PL EV+ L Y GVL DPA+ R++ + L++ + L + L ++ Y Sbjct: 241 RPLSEVVEALQDYYPGVLLLTDPALGERRITASLNLRSPVSALQLAIAPLGGHLRQWGPY 300 Query: 311 WINIS 315 I Sbjct: 301 LTLIR 305 >UniRef50_A6SZB6 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZB6_JANMA Length = 344 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 74/325 (22%), Positives = 125/325 (38%), Gaps = 22/325 (6%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 + Q R A W L+ + +++W E+ + + + + L L V Sbjct: 25 EQDQIQREAQAWLRRLASGEATQLDIQGFRRWREKSPLHWTTFTEAKRLWQMLDPALAQV 84 Query: 68 ASR---------ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQS----ETGEGLRADYRTA 114 A R L + RR + A G ++ +ADYRT Sbjct: 85 AQREAVCAANGTRLVGNKHGRRAFLGFATGAAAAAGAAIVYPPLGLWPAINEWQADYRTT 144 Query: 115 KGTVSRQQLEDGSLLTLNTQSAADVRFDAHQ--RTVRLWYGEIAITTAKDALQRPFRVLT 172 G L + L LNTQ++ + + + ++L GE AI + A F V Sbjct: 145 TGEQRMLALANDVKLELNTQTSVNRQSAQGEVPAGIKLVSGETAIDLSASAPA--FSVNA 202 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 G+ A + F VR DN + + V V P KR V A + + + A Sbjct: 203 GAGRSIAQASRFEVRNLDNKVCVTCIEGEVLVE---HPLGKRRVYARQQVVYDADTLSPP 259 Query: 233 KPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTD 290 + + ++W K L F PL +V+A + RYR G V+ + +SG F + + D Sbjct: 260 ATVALADWSAWRKGTLVFWQTPLDKVVAEINRYRPGKVVLLASHLNNRAVSGRFAIASLD 319 Query: 291 AILNVIAQTLPVKIQSITRYWINIS 315 +L I Q+ +K ++ + +S Sbjct: 320 TVLLQIQQSYDLKAHTLPNGILVLS 344 >UniRef50_B4WD83 Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WD83_9CAUL Length = 332 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 78/331 (23%), Positives = 131/331 (39%), Gaps = 17/331 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQD---QDNQWAWQQVENLR 57 M LT + R+A W A + V + +A + W E+D + A ++ L Sbjct: 1 MIQRLTSLFDRRPRTAEDWLARMRRPTVPARDQAAFLDWLEKDDNLPAYETAKARLAGLA 60 Query: 58 NQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRAD-----YR 112 G GD+A T R ++ G L L AD Y Sbjct: 61 PLAGAFEGDLARLRGRKPVNTGRRILIGGLATSAVAAIAVLMILPGLGSQSADKGAVVYA 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 +A G ++ LEDGS +TL+ + VRF+ R V L G + RPF+V Sbjct: 121 SAPGEITDLALEDGSRVTLDADTQIRVRFEDDARRVALLQGAAYFDVVHNP-ARPFQVAV 179 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQK-----RIVNAGESLQFSAS 227 + GT FT + N ++ + + V + ++ ++ G+ F+ Sbjct: 180 ADRNVIVTGTRFTTTLRRNRAEVSLLEGRVAIGRHDVGKRRSLDHAVMLAPGQKAVFTPG 239 Query: 228 --EFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGV-LRCDPAVAGLRLSGTF 284 +P + +T+W + L F D PL +VIA RY + + DPA+A R++ Sbjct: 240 LDRVHLSRPDVESATAWRERRLIFHDAPLSDVIAEAARYADRPMVIADPALAKTRVTVVL 299 Query: 285 PLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 PL +++ + LP+ I+ + I Sbjct: 300 PLTGQVGLIDRMDDLLPISIERTSDGRALIR 330 >UniRef50_A8ICQ2 Putative iron siderophore sensor protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8ICQ2_AZOC5 Length = 333 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 87/318 (27%), Positives = 133/318 (41%), Gaps = 13/318 (4%) Query: 2 NPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG 61 L A W L + + A ++ W + A +Q E L +G Sbjct: 11 RAELDAPMAPLAEKALEWLVFLHSGQETDADWAAYEDWRASGVAERKAAEQAERLWAGIG 70 Query: 62 GVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQ 121 L RR V+ G + L G G + L AD RTA G Sbjct: 71 PALRRP------RAGLPRRSVLAGAGIALVGGAGLAAFLGMR-RDLFADVRTAVGERRTL 123 Query: 122 QLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALG 181 L DG+ + L+ ++ D+ + A R + L G I ++ A D RPF V G ALG Sbjct: 124 TLADGTRIELDAATSLDLHYSAKTRRIELLEGRIFVSVAADP-NRPFIVDAGGGAARALG 182 Query: 182 TEFTVRQQDNFTQLDVQQHAVEV-LLASAPAQKRIVNAGESLQFS-ASEFGAVKPLD-DE 238 T F + + + + V +H V V V+AG ++FS A D Sbjct: 183 TAFEISRSGDMVNVVVSEHTVRVCYPRETDGPHVDVDAGSEVEFSRAGGLARPHAADVVS 242 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 SW +L+F D+PL EV+A ++RYR+G ++ D +A L +SG F +T A+L+ ++ Sbjct: 243 RMSWRNGLLAFQDRPLAEVVAQISRYRHGRIVIVDGELARLPVSGLFESADTAALLDALS 302 Query: 298 QTLPVKIQSITRYWINIS 315 LPV I + + I Sbjct: 303 AALPVTIDQL-PWLTLIR 319 >UniRef50_UPI0001BC82A8 putative anti-sigma factor n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC82A8 Length = 335 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 77/330 (23%), Positives = 129/330 (39%), Gaps = 28/330 (8%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQ-WYEQDQDNQWAWQ-QV-ENLR 57 M + Q L S W L + Q +Q+ W + Q ++ E ++ Sbjct: 14 MRGETSPDEEQIL---SDW---LHSQEAKEQLSNYYQETWKGSNNKLIAEVQGRMFERVK 67 Query: 58 NQLGGVPGDVASRALHDTRLTRR--HVMKGLLLLLGAGGGWQLWQSETGEGLRAD----Y 111 +Q+ ++ R T RR +LL++ AG G L+ E D Sbjct: 68 SQMHNAVQELNRRKQKRTMRIRRLFQYAAVILLIITAGIGGHLYTVSQTEPTVTDKSYLV 127 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADV--RFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 +T KG + L DG+++ LN+ + + A QR V L GE AKD +PF Sbjct: 128 QTGKGQRANITLPDGTVVWLNSYTQLHYNANYGATQRVVSLI-GEAYFEVAKDKE-KPFI 185 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQL--DVQQHAVEVLLASAPAQKRIVNAGESLQF-SA 226 V T + ALGT F V+ +Q+ + +V V I++ E+ F Sbjct: 186 VETAGMNVEALGTTFNVKAYREDSQIIATLFSGSVRVSSDRDN---VILSPDENATFERR 242 Query: 227 SEFGAVKPLDDESTS--WTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGT 283 S A+ D+ S + W + L F+ + L E+ L R N + + SG Sbjct: 243 SGKLAIHKPDNSSYAKMWRNNDLVFNGETLEEIAVLLNRMYNVQIAFKSERIKQYCFSGV 302 Query: 284 FPLKNTDAILNVIAQTLPVKIQSITRYWIN 313 + D ++ +I+ T P+ ++ I Sbjct: 303 ICNNSLDNVIELISLTSPITYETRGDTIIL 332 >UniRef50_D0XPS8 Anti-FecI sigma factor, FecR n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XPS8_9CAUL Length = 318 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 74/310 (23%), Positives = 114/310 (36%), Gaps = 21/310 (6%) Query: 12 ALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGV-------- 63 A W+ L E Q +Q W E D D+ A+ VE + L Sbjct: 6 VHDQAIRWFVALRDESADEGQWLAFQGWLEADADHPRAYDAVERMWLDLDEAEAAPDVVA 65 Query: 64 --PGDVASRALHDTRLTRRHVMKGLLL--LLGAGGGWQLWQSETGEGLRADYRTAKGTVS 119 P +R +TRR V + L+ A G W + D Sbjct: 66 PSPSPRRARPSGRPSVTRRLVPAFAIAASLVLAAGLWLNLSGRPQTFVTTDA------TR 119 Query: 120 RQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L+DGS + LN S VR QR V L GE A RPF V + + + Sbjct: 120 VVVLDDGSSVHLNRHSRMSVRMTDDQRMVTLDEGEAAFDVVHRPD-RPFVVRSGEQSVRV 178 Query: 180 LGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESL-QFSASEFGAVKPLDDE 238 LGT F V ++ VQ+ AV V A A + AG+S+ + + D Sbjct: 179 LGTAFDVLSHKGRYRVAVQRGAVAVD-AGAGHDDTRLRAGQSIERVGLAPPVLSTISPDA 237 Query: 239 STSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQ 298 +TSWT+ L + + L V L+RY + + + +G + + + + Sbjct: 238 ATSWTQGTLIYRNASLSTVADDLSRYLDKPVIVGDPAKRVMFTGVLQVGDEATMARQLED 297 Query: 299 TLPVKIQSIT 308 LP+++ + Sbjct: 298 LLPIRVSRSS 307 >UniRef50_B3QG97 Anti-FecI sigma factor, FecR n=5 Tax=Bradyrhizobiaceae RepID=B3QG97_RHOPT Length = 329 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 120/330 (36%), Gaps = 19/330 (5%) Query: 1 MNPLLT-DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQ 59 MN D R++AL A+ W+ L+ S + +Q W D + A Q V +L Sbjct: 1 MNTASDNDDRQRALHEATEWFVRLNNPLASDETRRAYQIWLVADVAHPEAMQAVSDLWGA 60 Query: 60 LGGVPGDVAS-------RALHDTRLTRRHVMKGLLLLLGAGGG------WQLWQSETGEG 106 L +A+ A T RR G L + + + Sbjct: 61 LDQPAAQLAASGWHRDTPAPVPTPPHRRPARHGARLAAASAVLALVAAIFVWRDPGIIDR 120 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQR 166 AD T G +L DGSL L+ +A + +R V L G D+ R Sbjct: 121 AFADAATRPGERRDVRLADGSLAMLDGDTALNSDMAGGRRVVTLLRGRAWFDVVADS-AR 179 Query: 167 PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSA 226 PF V Q + GT F V + + V+ V V + + + + F Sbjct: 180 PFTVHAGQVDVQVRGTAFEVDR--EAAAVTVEHGRVAVSGPQTADLQVDLTDWQRVAFQN 237 Query: 227 SEFGAVKPLDDE-STSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTF 284 ++ + + +W + ++ PL +V+ L + G + D + LSGTF Sbjct: 238 GSLSTPTAIEPDQAFAWRRGLIIVDRAPLSQVVKELDKMAPGHVLIVDRQLERTTLSGTF 297 Query: 285 PLKNTDAILNVIAQTLPVKIQSITRYWINI 314 + +++L + TL V+ S+ I Sbjct: 298 RADDQESVLEALRATLGVRTLSLPGVATLI 327 >UniRef50_A6T0M6 Fe2+-dicitrate sensor, membrane component n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0M6_JANMA Length = 326 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 76/326 (23%), Positives = 136/326 (41%), Gaps = 19/326 (5%) Query: 5 LTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP 64 +T R A W L+ V+ ++QW Q++ + A+ Q ++ + Sbjct: 1 MTADDTAIQREAQAWVVRLASHAVTENDANAFRQWCAQNRAHATAFSQARSVWGAMRPAA 60 Query: 65 GDVASR------ALHDTRLTRRHVMKGLLLLLGAGGGWQ----LWQSE--TGEGLRADYR 112 + A R RR + G + A ++ LW S G ADY+ Sbjct: 61 MQLKQHEAIRQDAASGVRKGRRAFLGGAVAASVAYLAFRPPMELWPSLGEVAAGFAADYQ 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDA-HQRTVRLWYGEIAITTAKDALQRPFRVL 171 TA G + DG L+ +NTQ+ +V+ DA ++ + L GE I T + R V+ Sbjct: 121 TATGEQRSLAMHDGLLVQMNTQTRINVQADANNETDLELLSGEAEIQTDFNKENRV-TVV 179 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGA 231 G ++AL F +R N + Q V+V A + ++AG+ L + A +FG Sbjct: 180 AGGGVVSALRARFNIRYTGNNVCVTCLQGRVQVGQAIH---RATLDAGQQLTYRADDFGV 236 Query: 232 VKPLDD-ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNT 289 + ++ T+W K +L F+ L EV+A + RYR G L + ++ +F + Sbjct: 237 PQAVNTSNVTAWRKRMLVFNQVALSEVVAEVNRYRPGKLILRSEELGRSKVQASFSIDRL 296 Query: 290 DAILNVIAQTLPVKIQSITRYWINIS 315 D ++ +I + + + + Sbjct: 297 DDVIALIRDAYGADVTQLPGGIVLLR 322 >UniRef50_A6LH79 Putative anti-sigma factor n=1 Tax=Parabacteroides distasonis ATCC 8503 RepID=A6LH79_PARD8 Length = 309 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 107/296 (36%), Gaps = 14/296 (4%) Query: 22 VLSGERVSPQQEARWQQWYEQDQDNQWAWQQVE-----NLRNQLGGVPGDVASRALHDTR 76 VS ++ + W ++ +N + + +L V R + Sbjct: 7 RYIRGEVSEEERLKVASWLDESPENMREFLALRKLYDLSLWQSDTNEKYSVRKRHFSIQK 66 Query: 77 LTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSA 136 +T + + L+G G QL + + G + L DG+ + LN++S Sbjct: 67 ITIELLKIAAIFLVGFWGSKQLLTQQPDKAQMQTIHVPAGQRAEVILADGTHVWLNSRST 126 Query: 137 ADV--RFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF-- 192 +F A+ R V L GE + + PF V T + + LGTEF V+ N Sbjct: 127 LKFSEQFSANTRNVEL-DGEGYFSVQHNEKS-PFTVQTPKYTIQVLGTEFNVKAYHNSPL 184 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDK 252 + + + +VE+ Q + E + D W + + F ++ Sbjct: 185 FETALIKGSVEITSPELS-QSLRLKPDEIAVANNGRLETSHISDYNYFKWKEGLFCFENE 243 Query: 253 PLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKN-TDAILNVIAQTLPVKIQS 306 + ++I L Y + + P++ R SG F +K+ + +L V+ Sbjct: 244 SIQDLIDKLQLYYDIQIDVQRPSLLQYRYSGKFRIKDGVEHVLKVLQLKHKFTYTK 299 >UniRef50_Q6NA38 Probable FecR, iron siderophore sensor protein n=2 Tax=Rhodopseudomonas palustris RepID=Q6NA38_RHOPA Length = 322 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 72/327 (22%), Positives = 126/327 (38%), Gaps = 22/327 (6%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP- 64 R A W L + A W ++ +++ A+++ +L G Sbjct: 1 MPEFDAVQRQALAWVIRLHSGEATSDDAAALALWRKRSAEHEAAFREAVHLWRTFGAATR 60 Query: 65 -------GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSET------GEGLRADY 111 S A ++RR ++ G L + GG E L ADY Sbjct: 61 ELIGSEHAAAISLASPRAAVSRRLLLGGALAAAASLGGVYAAVHPPLGLWPSLEELAADY 120 Query: 112 RTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVL 171 RT KG + ++ LTLNTQ++ +R + + L GE A+ A+D P V Sbjct: 121 RTGKGERRKIEVAGDIGLTLNTQTSLSLRSTSAAPRIELISGEAALDVARDNA--PVVVD 178 Query: 172 TRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF-SASEFG 230 G++ AL +R D Q+ VEV +K + A + + AS Sbjct: 179 AGGGRIAALRARLNIRCIDGEVQVACFAGDVEVAWKD---RKVQLTAAQQSTYSDASGLV 235 Query: 231 AVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNG-VLRCDPAVAGLRLSGTFPLKN 288 P D ++ +W + +L D P+ +++ + RYR G ++ D + +SGTF L + Sbjct: 236 PASPFDLEQEQAWQRGLLLVHDWPVARLVSEINRYRPGRIVIMDSQLGRRMISGTFNLDH 295 Query: 289 TDAILNVIAQTLPVKIQSITRYWINIS 315 D + +++ + +S Sbjct: 296 LDDFIAQARGLFGATARTLPGGIVLLS 322 >UniRef50_A4JPI9 Putative FecR n=4 Tax=Burkholderia RepID=A4JPI9_BURVG Length = 332 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 114/337 (33%), Gaps = 28/337 (8%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M + AL AS W L S +++W Q A + + L Sbjct: 2 MTKAQAEPAHDALDEASAWLLRLRSGEASQADADAFERWCAQRP---QAAALLRDTWGSL 58 Query: 61 GGVPGDVASR---------ALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSE-----TGEG 106 ++A R R + + AG W + + Sbjct: 59 RTAAAELAQEERTSAAWASVAKRERTMRTGRRAFIGFAVAAGASWLAVRPPLQLWPSLGD 118 Query: 107 LRADYRTAKGTVSRQQLEDGSLLTLNTQSAAD-VRFDAHQRTVRLWYGEIAITTAKDALQ 165 L ADY T G L + LNTQ+ D + V + GE I A Sbjct: 119 LTADYHTGTGEQRSVALSSRVTVALNTQTRIDMLPASDAAHGVEVVAGEAEIDAATPLAG 178 Query: 166 R-----PFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGE 220 R P V+ G++ A F VR+ + V + + P R + A + Sbjct: 179 RATPLQPVTVVAGDGRMQATVARFNVRRTGAQVCVTCLSGTVAL---AHPRGARTLKADD 235 Query: 221 SLQFSASEFGAVKPLDDEST-SWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGL 278 + + V D + +W + +L F+D PL VI + RYR G + A+ Sbjct: 236 QVVYDDRGVQPVTRADPGAISAWRRGMLVFNDVPLSSVIDEINRYRPGRVVLRRTALGAN 295 Query: 279 RLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 R+ FP+ D +++++ + I + + +S Sbjct: 296 RMQAQFPIARLDDVIDMVGRLYGAHITRLPGNIVLLS 332 >UniRef50_B7VA09 Probable transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=B7VA09_PSEA8 Length = 318 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 9/316 (2%) Query: 7 DSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLG----- 61 R++ + A W L S + ++W ++ ++Q+ L Sbjct: 5 PERQRIVEEAIEWMVRLQSGDFSAAEGDALERWKALSSEHAEVFRQLLGSLAPLQDSPWR 64 Query: 62 GVPGDVASRALHDTRLTRRHVMKGLLL-LLGAGGGWQLWQSETGEGLRADYRTAKGTVSR 120 G P RAL RR V L L +L AGG + G GL + T G Sbjct: 65 GQPSATVLRALEQPSSRRRFVGGALGLFVLLAGGAGLERWVQAGMGLPGELATGTGERRD 124 Query: 121 QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL 180 L DGS L LN +S A D QR + L G + + +D F + G++ Sbjct: 125 WLLADGSRLRLNARSKARPLLDGAQRRLELRRGAMRLEVKEDPRG-AFALDCAAGRVDCA 183 Query: 181 GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST 240 + ++ +L + + + + ++ V A SL F A P+ Sbjct: 184 SGSLLLAEERGAIRLVTLRGSARLT--TGEGRQLAVAARRSLLFDAGGLLEQGPMQAGED 241 Query: 241 SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL 300 +W L D+ L V Y G+L+ D +AG R+SG FPL + L+++ ++L Sbjct: 242 AWASGWLEVHDRSLAWVAEAFRPYLPGILQLDAEIAGNRVSGLFPLDDMHTSLDMLGRSL 301 Query: 301 PVKIQSITRYWINISP 316 P+++ + YWI++ P Sbjct: 302 PIRVLRYSDYWISLRP 317 >UniRef50_C7JHQ5 Two component sensor histidine kinase FecR/PupR n=8 Tax=Acetobacter pasteurianus RepID=C7JHQ5_ACEP3 Length = 325 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 72/326 (22%), Positives = 132/326 (40%), Gaps = 16/326 (4%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 D ++A A W +L+ E +++W + + AWQQV + + + P Sbjct: 1 MDESQKAEAEAIDWSLLLNEEPDDQALRHEFEKWLSEKPAHAIAWQQVTAISDIIRSAPP 60 Query: 66 DVASRALHDTRLTRR------HVMKGLLLLLGAGGGWQLWQ-------SETGEGLRADYR 112 + + R + K LL G+G + AD Sbjct: 61 NRQVAPVRPVAFQSRIQALLVFLQKRWRLLFGSGVAATALCAALLLIIPDLITRFLADQY 120 Query: 113 TAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLT 172 GT L DGS + L +SA ++ A +R + L GE T + RPF V Sbjct: 121 APAGTTRTLHLADGSDVVLAPRSAISIQISAQERHIDLIQGEAFFTVHHE-NSRPFIVQA 179 Query: 173 RQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAV 232 + + +GT F ++ + T + V+ V + ++ R ++ GE + S ++ G Sbjct: 180 GKVRAQDIGTAFDIQIAHHETTVRVRDGVVHIAASTPRIYARDLHGGEWARVSDTDIGDG 239 Query: 233 KPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKNTDA 291 + +W + +L + +G++I L + + A+ G R++G + L+N DA Sbjct: 240 TLPPETVGAWKEGVLIARNDKVGDMITALRPWSGKRIVVMKQALLGKRVTGVYDLRNPDA 299 Query: 292 ILNVIAQTLPVKIQSITRY-WINISP 316 L +I L KI +T + + +SP Sbjct: 300 ALRLIVSPLGGKIIHVTPWANLVVSP 325 >UniRef50_C4TZ43 Two-component system sensor protein n=4 Tax=Yersinia RepID=C4TZ43_YERKR Length = 287 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 106/287 (36%), Gaps = 17/287 (5%) Query: 37 QQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGW 96 W + A++Q++ + +P ++ + R + L Sbjct: 2 DAWLRYSPAHAEAYRQMQQVWGDCALIPRPASAPQPAKQARSWRPLRSCAAGLFFLFALL 61 Query: 97 QLWQSETG------EGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRL 150 DY L DG+ + +N S V + R + L Sbjct: 62 LPMSQLPSLLTNDMSLQTTDYS------REIVLSDGTRVHVNRHSQIRVHYAKDNRQLWL 115 Query: 151 WYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAP 210 GEI + A + RPF V + Q+ +GT F VR + V++ V + Sbjct: 116 DQGEIYLQVAANK-ARPFTVYAGESQVKVVGTAFDVRYDLGEVAVAVKEGIVAMT-GRPN 173 Query: 211 AQKRIVNAGESLQF--SASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGV 268 +++AG++ + + E W LSF ++PLGE++ L RYR G Sbjct: 174 MAAVMLHAGDTARLLPEKKRLQLSQRAVAEIGEWRSGQLSFRNRPLGELLTQLRRYRQGK 233 Query: 269 LRC-DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 + D ++A L +SG+ L + D L+ + L V + + I I Sbjct: 234 IELTDASLAQLPVSGSLDLNHPDEFLDSLPLLLAVNVVHDAQGNIMI 280 >UniRef50_Q79AD3 HasS protein n=1 Tax=Serratia marcescens RepID=Q79AD3_SERMA Length = 317 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 11/292 (3%) Query: 21 AVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR------ALHD 74 L+ + + W D + A +Q L LG +P + AL Sbjct: 17 VSLAEGALPADRRRALDAWLAADPQHPAALRQARLLWTTLGQLPPEQRQALQPQVAALKT 76 Query: 75 TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQ 134 R + A + L+ADY+T +G V L DGS + L++ Sbjct: 77 PSRHRWPRWAVAAAVALAVSFGVYRGPDLWIRLQADYQTVRGEVREVALPDGSRVALDSG 136 Query: 135 SAADVRFDAHQRTVRLWYGEIAITTAK--DALQRPFRVLTRQGQLTALGTEFTVRQQDNF 192 SA + + A +R VRL G A A RPFRV + G ALGTEF+V + + Sbjct: 137 SAIALAYSADERKVRLLSGAAYFIVAPLGGAESRPFRVEAKNGVTQALGTEFSVARTEQG 196 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDK 252 + V QH+V V L + +V ++ + + + + +W + L + Sbjct: 197 VDVSVHQHSVRVTLERGE-RSLVVAQRQAAHYRNGQLQLTRQTAGDD-AWRRGWLVIDRQ 254 Query: 253 PLGEVIATLTRYRNGVLR-CDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVK 303 PL + +A L RYR + +PA+ +SG F L D + I Q L + Sbjct: 255 PLTQALAQLNRYRGTRIVAVNPALRTRTVSGVFALNKLDDGVGAIRQELSAR 306 >UniRef50_Q4KGY2 Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Pseudomonas RepID=Q4KGY2_PSEF5 Length = 320 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 108/311 (34%), Gaps = 7/311 (2%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDV 67 Q A+ W+A + + W + + A+ + E L L + Sbjct: 12 DSEQIDAEAASWFARNRNDP-DRATRKAFDAWVSE-PAHARAYAEFEELWVDLAQLQQLS 69 Query: 68 ASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGS 127 L + + + G ++ KG +L DGS Sbjct: 70 RPIPLPRRKPAPWRPALAAAAAVLCAVLAVNLGTPQGPYIQQVAAQEKGA-RAFKLPDGS 128 Query: 128 LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 L +N + V F A QR + L G++ + A D RP V + ++ +GT F VR Sbjct: 129 TLYVNANTQVKVDFSAQQRDIYLQQGQLYLEVAADKE-RPLWVHSGAAKVRVVGTAFDVR 187 Query: 188 QQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFS--ASEFGAVKPLDDESTSWTKD 245 + + V V P + ++ A + + DE W Sbjct: 188 RGQRQLVVSVAHGQVAFSPDGKPGELTLLGARQQATYDLHKGTLRQQTLDSDEVADWRSG 247 Query: 246 ILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKI 304 L+F ++ L ++ L YR + + ++ ++SG + + DA++ + +PVK Sbjct: 248 HLAFRNRDLASLVDELNLYRRQPVQLAEGSLGAYKVSGNLDVNDPDALIKALPVLIPVKA 307 Query: 305 QSITRYWINIS 315 + + + Sbjct: 308 VPLADGQLRLE 318 >UniRef50_A6KXP7 Putative anti-sigma factor n=6 Tax=Bacteroides RepID=A6KXP7_BACV8 Length = 314 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 101/312 (32%), Gaps = 17/312 (5%) Query: 18 HWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL---GGVPGDVASRALHD 74 S + ++W + ++N ++ L N + G R + Sbjct: 4 DLLYRFFEGHASLEDMKVVKEWADASEENAGLLRRERKLFNAMILAGHSRRTDIQRMRNR 63 Query: 75 TRLTRRHVMKGLLLLLGAGGGWQLWQSETGEG-----LRADYRTAKGTVSRQQLEDGSLL 129 R +K +++ + S + G L DGS + Sbjct: 64 RNYFIREFLKIASVIVITVSVTAVLFSIGKDNEDMYLAMQTITVPAGQRVNLDLPDGSNV 123 Query: 130 TLNTQSAADV--RFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVR 187 LN + F +R V L GE + PF V T + LGT+F V Sbjct: 124 WLNAGTKMQYPVSFMTGKREVIL-DGEAYFEVVHNEKS-PFVVHTSTLDVEVLGTKFNVE 181 Query: 188 QQDNF--TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKD 245 + + + V+V L ++ + K D W + Sbjct: 182 AYSARKIFETSLMEGKVKVKLPHDDKNSVVLVPNQKTTLIDGRLVVSKIDDYNVYRWKEG 241 Query: 246 ILSFSDKPLGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKN-TDAILNVIAQTLPVK 303 + F +KP ++I L +Y + ++ D +A + L+G F + + D L V+ + Sbjct: 242 LYCFRNKPFADIIKDLEKYYDLSIQMDKKEIAKVALTGKFRISDGLDYALRVLQNDVAFT 301 Query: 304 IQS-ITRYWINI 314 Q I+I Sbjct: 302 YQRNRDNDVIHI 313 >UniRef50_Q2L2C5 Transmembrane sensor protein n=1 Tax=Bordetella avium 197N RepID=Q2L2C5_BORA1 Length = 303 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 10/307 (3%) Query: 11 QALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASR 70 A R A W+ VL S A+ W D +Q AW +V + + VP +A Sbjct: 3 DARRRAIEWWVVLQSGTASASDRAQLNDWLLADPRHQEAWSRVLEVEQGVRRVPAALAQA 62 Query: 71 ALHDTRLTRRHVMKGLLLL-LGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLL 129 T +RR V++GL + A GW +++ + L AD T G V + G + Sbjct: 63 VFKPT--SRRAVLRGLGAASIAALSGWAVYRHTPWQRLIADRSTGLGEVDTLAMAPGLDV 120 Query: 130 TLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQ 189 L + +A V + +RL GE+ + A F + T + A F V Sbjct: 121 ALASDTAVQVYRKRGHQALRLLRGEVFV----HAQGVAFTLDTDSASIAADSARFCVSLD 176 Query: 190 DNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSF 249 + ++++ + + V + L+ SAS+ + ++ +W +L Sbjct: 177 EQGCRVELLDGELAIERGDY---SLRVAGAQGLRLSASDGLTRLAPNPDAAAWVDGMLVA 233 Query: 250 SDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITR 309 D L E++A L R+R+GV+ D +AGLR+SG FPL + + L +A++LP+ + Sbjct: 234 HDWSLRELVARLARHRHGVIHVDADIAGLRVSGVFPLYDAERALAAVARSLPIALHRRGP 293 Query: 310 YWINISP 316 W+++ P Sbjct: 294 LWLSVVP 300 >UniRef50_B7BE29 Putative uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BE29_9PORP Length = 326 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 109/314 (34%), Gaps = 24/314 (7%) Query: 18 HWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGD----------- 66 + +S +++ Q +++++ + ++NL + + Sbjct: 8 DLLSKYLAGEISVEEKRILFQQLKENEELRKEAAGIQNLSALVSLANEEGTVLDRQYRSF 67 Query: 67 VASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGL-----RADYRTAKGTVSRQ 121 + R + R V ++L + L + G+ ++ T G ++ Sbjct: 68 IGMRKKRALLFSLRKVAGYAAIVLFSVLSTYLLMNYAGDKEEEFVRYQEFSTPAGQRAKV 127 Query: 122 QLEDGSLLTLNTQSAADV--RFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTA 179 L DG+ + LN + RFD +R V L GE K A PF V T + + Sbjct: 128 LLADGTEVWLNANTTLRYPERFDPKRREVELH-GEAFFEVEKAAGN-PFVVKTNKMDIQV 185 Query: 180 LGTEFTVRQQDNF--TQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDD 237 GT+F V D + + AV V + + + S + Sbjct: 186 TGTKFNVNAYDTEEYFVASLVEGAVSVSCVHNRNSSYALQPRQQIVVSDHSSKVSSFENT 245 Query: 238 ESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFPLKN-TDAILNV 295 + +W + + F D L ++I L Y + + + + R +G F ++ +++L Sbjct: 246 DFMAWKEGVFIFDDMLLTDIIKKLELYYDVSIIVKNTKLGNFRYTGKFRQRDGVESVLRK 305 Query: 296 IAQTLPVKIQSITR 309 + P K Sbjct: 306 LQIVYPFKYTKDDD 319 >UniRef50_Q1NEQ4 Two-component system sensor protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ4_9SPHN Length = 329 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 81/330 (24%), Positives = 122/330 (36%), Gaps = 19/330 (5%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M + R +A W A SP E + W + D ++ A+ Q E Sbjct: 1 MADQVRAIPRAIQDAAGDWLARRQE-PASPDVEQAFAVWLDADPRHRIAYAQAERHWQDS 59 Query: 61 GGVPGDV--ASRALHDTRLTRRHVMKGLLLLLGAGGG----------WQLWQSETGEGLR 108 + +R L RH LG ++ Sbjct: 60 LLLADSDIGRTRKLVRAPFLMRHSNHVAAASLGVVVLLGIGGVGLLRYESPLELVSPAQA 119 Query: 109 ADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPF 168 A Y TA G + L DGS LTL+T + V A +R V L G A D +RPF Sbjct: 120 ATYETALGEIRTISLADGSQLTLDTATRVRVTLSASERKVSLERGRARFRVAPD-GKRPF 178 Query: 169 RVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS--APAQKRIVNAGESLQFSA 226 V G + A T F V + + V + V++ S A R + AG++ Sbjct: 179 TVTVPGGTVVARSTLFDVSVERESPVVAVIEGRVDLTSTSDAASHPARTLAAGQTADLGN 238 Query: 227 SEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRC-DPAVAGLRLSGTFP 285 ++ +P T W +L+ PLGE +A + RY +R DP +A L ++G F Sbjct: 239 ADM--PRPTLPAETQWVSGMLALDGGPLGEAVAAINRYNRIQIRLADPDLARLSVTGAFQ 296 Query: 286 LKNTDAILNVIAQTLPVKIQSITRYWINIS 315 ++N DA +A T + I I + Sbjct: 297 VRNPDAFARAVAATFGLGIDRTDPGVILLR 326 >UniRef50_Q13G72 Putative FecR n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13G72_BURXL Length = 318 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 97/321 (30%), Positives = 147/321 (45%), Gaps = 11/321 (3%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M +++ AL +A W L+ S + + W ++Q AW +E + Sbjct: 1 MTDRASNAP--ALDAAIRWAVRLAAGNASEAEFREFLDWKAAAVEHQLAWGSIEQQLHLF 58 Query: 61 GGVP---GDVASRALHDTRLTRRHVMKGLLL--LLGAGGGWQLWQSETGEGLRADYRTAK 115 G A RAL TR++RR +++ L + G + + + L AD T Sbjct: 59 SSARERDGGTAHRALAATRVSRRKLLRDALATVAVVGVVGAAVRRFGLFDSLYADVATDV 118 Query: 116 GTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQG 175 G + L D S+L L+ +SA DV F +R +RL G + + A+D+ RPF V TR G Sbjct: 119 GARRQLSLADNSMLVLDARSAVDVNFGERERAIRLLEGRLFVRVARDS-ARPFVVYTRDG 177 Query: 176 QLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKP- 234 +ALGT F V ++L V AV A+ V A + A V+ Sbjct: 178 SFSALGTAFGVGLSSEGSRLAVTHSAVRARCAA--GATLDVVASQVATLRAGAQPVVERW 235 Query: 235 LDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILN 294 D +W K ++ D+PL EV+ +L RY G + VA L++SG FPL + + Sbjct: 236 HADSEVTWMKGYVTIVDRPLHEVVESLNRYVRGFISMSDDVAALKISGLFPLDDAQMAIR 295 Query: 295 VIAQTLPVKIQSITRYWINIS 315 IAQTLPV + T Y+I I+ Sbjct: 296 QIAQTLPVIVTYHTDYFIRIT 316 >UniRef50_Q5LHX2 Putative anti-sigma factor n=4 Tax=Bacteroides RepID=Q5LHX2_BACFN Length = 309 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 109/298 (36%), Gaps = 13/298 (4%) Query: 22 VLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL--GGVPGDVASRALHDTRLTR 79 S +++ +W + D + + + L + P + T Sbjct: 8 RYLTGDASAEEKQMVVRWLDADPQHMREYLALRKLHDITLWQEKPAATVDKKKWLTLPYI 67 Query: 80 RHVMKGLLLLLGAGGGWQLWQSETGEGL--RADYRTAKGTVSRQQLEDGSLLTLNTQSAA 137 R +K + L A E G G + L DG+ + LN+ + Sbjct: 68 REFIKIAAIFLIAVTSVYFLAPERGRDTPDLKAIHVPSGQRAELTLGDGTRVCLNSNTTL 127 Query: 138 DV--RFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF--T 193 FD +R V L GE AK+ ++PF V ++ ++ LGTEF V + Sbjct: 128 TFPDHFDRKERRVTL-DGEGYFQVAKN-EKKPFIVQAKEYEVRVLGTEFNVMMYKDQDFF 185 Query: 194 QLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKP 253 + + + +VEV + +K + E L A + + W + IL F + Sbjct: 186 ETVLLKGSVEVN-ETTTGRKVKLQPNERLFGKAGQLRKESINEWNRALWMQGILYFDNTR 244 Query: 254 LGEVIATLTRYRNGVLRCD-PAVAGLRLSGTFPLKN-TDAILNVIAQTLPVKIQSITR 309 + E+I L Y + + ++A +R +G F +++ + +L V+ Q Sbjct: 245 MDEIIRQLGLYYDVKFILEKESLANVRFTGKFRIRDGVEHVLKVLQLKCKFTYQRDED 302 >UniRef50_Q82WW5 Possible transmembrane sensor n=2 Tax=Nitrosomonas europaea RepID=Q82WW5_NITEU Length = 327 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 15/327 (4%) Query: 1 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL 60 M+ + + A W+A G+ +S ++ + +W + +Q AW++VE + Sbjct: 1 MHLSNSPNSHDPDAQARFWFARQQGQTLSEAEQQQLAEWLAANPLHQDAWRRVEEDWLAI 60 Query: 61 GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYR-------T 113 + L R R K L L + L T Sbjct: 61 DRYRHALNDE-LKKARRNRPGQHKAAFQLKRRAAAAALLVAVCIPVLYQGMTGTTTYWNT 119 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 KG + L GS L L+T + V + V+L GEI + TA RV Sbjct: 120 LKGEQQQITLAGGSTLNLDTATRITVTQNWFTHHVQLHEGEIYLETASSDWHT-LRVSAE 178 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQF--SASEFGA 231 ++ +GT F+VR + ++V + VEV Q ++ AGE L ++E+ Sbjct: 179 HYEIRDIGTRFSVRYIPDQFMVEVAEGTVEVK---KQGQLVLLQAGEVLSIITGSNEWRL 235 Query: 232 VKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGTFPLKNTD 290 + W K +L F+ L +V+ + RY D A+ +++SG F L D Sbjct: 236 AALPAGDIAHWRKGLLVFNAHRLHDVLHEIARYHTVQFDLADSAIGEIQVSGRFKLDELD 295 Query: 291 AILNVIAQTLPVKIQSITRYWINISPL 317 L +IA TL + I+ + L Sbjct: 296 TNLQIIADTLKINIEHPAPGRYRLGAL 322 >UniRef50_B1ZXK1 Anti-FecI sigma factor, FecR n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXK1_OPITP Length = 342 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 76/331 (22%), Positives = 125/331 (37%), Gaps = 30/331 (9%) Query: 9 RRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP---- 64 ++A+ W ++ + A + W D + A+ +VE ++ L +P Sbjct: 13 DEHLTQAAAEWLIRRGAG-LNSAEAAEFAAW-HADPRHAIAFARVEKTQHLLFRLPQAPT 70 Query: 65 -------GDVASRALHDTRLTRRH----VMKGLLLLLGAGGGWQLWQSETGEGLRADYRT 113 D R + +R H + W W + E + T Sbjct: 71 AAALMAEADSLMRRARPAKPSRLHGWPTYVTLAAAACVTVALWLAWPTLRPERDI--FAT 128 Query: 114 AKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTR 173 G L DGS L LN S V F A +R V+L GE AKD RPF V Sbjct: 129 LAGQRQSVTLNDGSTLVLNGDSEVQVAFAAAERRVQLHRGEAHFFVAKDP-ARPFFVSAD 187 Query: 174 QGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLA-----SAPAQKRIVNAGESLQFSASE 228 + + A+GT F VR++ N + V + V+V A A + +GES+ Sbjct: 188 KVTIRAVGTAFNVRREANAIDVLVTEGKVQVTHGVTGANGAAALPIYLVSGESVHIDTLS 247 Query: 229 FGAVKPLDDESTSWT----KDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVAGLRLSGT 283 D L FSD PLGEV+A RY + +P +A + G Sbjct: 248 SAIAVASDAAPAGEKLLHSAPRLVFSDTPLGEVVALFNRYNQLQIEIAEPELALRAVRGN 307 Query: 284 FPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 F N ++ + ++ ++ +I+ ++ + + Sbjct: 308 FDADNAESFIALMERSGDAQIERVSPTKVRL 338 >UniRef50_B8H128 FecR family protein n=3 Tax=Caulobacter RepID=B8H128_CAUCN Length = 357 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 86/337 (25%), Positives = 136/337 (40%), Gaps = 27/337 (8%) Query: 3 PLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGG 62 R+A A+ WY +SG+RVS A + W E N A+ ++E L + Sbjct: 17 EPSGARDRRARDEAAAWYGKMSGQRVSNADLAAFFAWRENS-LNDAAYTRIEALTTSVRA 75 Query: 63 VPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGW-------------QLWQSETGEGLRA 109 + D +A+ +T R + L LG G G + G+ + Sbjct: 76 LADDPRLQAIAETAARRPRGVVARLRSLGQGAGLRTAGVGAALVAAMVIGAVLLGQVGQQ 135 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 YRT G L+DGS + LNT S VR QR++ L G+ A DA RPF Sbjct: 136 TYRTQIGERRAVSLDDGSTIELNTNSQVRVRLSKTQRSLILDRGQAMFIVAHDA-ARPFV 194 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQ----------KRIVNAG 219 V + A+GT F V + ++ + + V+V A I+NAG Sbjct: 195 VTAGDTSVRAIGTRFEVYRAAGAVRVTLAEGRVQVSKAGRRNDGGGQGGERSTPVILNAG 254 Query: 220 ESLQFSASEFGAVKPLD-DESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAV-AG 277 + + + + + +D T WT+ L+F D L E +A + RY + P A Sbjct: 255 QRVDMAPAAPASPVAVDVAAVTGWTRGRLTFKDASLAEAVAEVNRYSRRQVVLGPGTPAD 314 Query: 278 LRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINI 314 R++G F +T+ +A L +K + I + Sbjct: 315 QRVNGEFDAGDTETFARGMAVLLDLKTVARPDGGIEL 351 >UniRef50_C7JBI1 Two component sensor histidine kinase FecR/PupR n=8 Tax=Acetobacter pasteurianus RepID=C7JBI1_ACEP3 Length = 321 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 131/318 (41%), Gaps = 11/318 (3%) Query: 8 SRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP--- 64 R+ ++A+ WY L + + R+++W E D ++ AW + + + +P Sbjct: 3 ERKTPAQAAAGWYLYLREDPDDEGLKNRFKEWLESDPAHKQAWADMNTTASVMAEIPSFL 62 Query: 65 ------GDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTV 118 + L RR + L L+ A + LRAD+ Sbjct: 63 HTSTSIAPAFVPQKPERVLGRRLLSGCGLALMAACAAMIFVAPDMLVRLRADHYAPVAET 122 Query: 119 SRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLT 178 +L DGS + L Q+A + +A +R++ L GE D +R FRV T +T Sbjct: 123 RDVRLADGSEIILAPQAAISITMNASERSIHLLQGEALFNVHHDP-KRLFRVTTENAVIT 181 Query: 179 ALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDE 238 +GT F VR + T + V++ +V V+ +P R + AGE + S + + Sbjct: 182 DIGTIFDVRMEGAATVVAVREGSVRVIARRSPVAGRDLRAGEWERVSGAASASGVVPVAT 241 Query: 239 STSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIA 297 +W +L ++ G +I L + ++ D ++ R++GT+ L +A L I Sbjct: 242 IGAWRDGLLVARNETFGNMIGALRPWTSTRIILTDRKLSDKRVTGTYNLHQPEAALRQIV 301 Query: 298 QTLPVKIQSITRYWINIS 315 T + S + +S Sbjct: 302 DTYGGHVSSWASWVDIVS 319 >UniRef50_Q48AA2 Putative regulatory protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q48AA2_COLP3 Length = 345 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 129/339 (38%), Gaps = 33/339 (9%) Query: 6 TDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPG 65 + AS W A + ++ ++A ++ W + + +Q ++ ++ +++ + Sbjct: 8 NNDDEVMFDQASIWIARM-DRSLTELEQAEFKAWLSESEQHQKLIIEMASMWDKMDSLDR 66 Query: 66 ---------------DVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRAD 110 A + ++ L ++ L E Sbjct: 67 LADLFPTSDKTDSKFKTAPKTAQWPLALAASLVLALFVVFFTDIT--LNSLWQEEQQFVR 124 Query: 111 YRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRV 170 Y TA G S L D S + LNT S VR+ R + L GE+ + A D RP V Sbjct: 125 YETAVGESSTIYLPDNSKVLLNTDSVLLVRYTDDYRLLDLQRGELHVEVAHDK-SRPLSV 183 Query: 171 LTRQGQLTALGTEFTVRQQDNFTQLDVQQHAV---EVLLASAPAQKRIVNAGESLQFSAS 227 + + A+GT F+V+ + + +L V + V ++ + +V SL S Sbjct: 184 VANHKVIQAVGTAFSVQVKTSEVELIVTEGRVIIGQLNEKQEVNETALVIPSSSLAVSKG 243 Query: 228 EFGAVKPLDD----------ESTSWTKDILSFSDKPLGEVIATLTRYRNGVL-RCDPAVA 276 E ++ + +S SW + L F+ + L E + ++RY + D + Sbjct: 244 EIASLAVANSVSVIDNKAIKKSLSWRQGNLVFNGETLAEAMEEVSRYTSVTFEIADEDLK 303 Query: 277 GLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINIS 315 +R++G F + +++V+ +K + + + + Sbjct: 304 KIRIAGRFKTGDVKGLISVLKHNFNIKTDRVNKGLVVLR 342 >UniRef50_C5SMT1 Anti-FecI sigma factor, FecR n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMT1_9CAUL Length = 322 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 71/308 (23%), Positives = 109/308 (35%), Gaps = 23/308 (7%) Query: 26 ERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVP-------------GDVASRAL 72 R + + W D +Q A+ + E L + A Sbjct: 18 GRWDEADQVALEAWLAADTRHQGAFFRAEAAWAMLDRASVMGAGFAADSVQTSPFQALAP 77 Query: 73 HDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLN 132 +TRR + G L+ + L R RT G + + L+D S+ ++N Sbjct: 78 RPRTVTRRQWLAGGGLIAASIASTSLILPALN---RQRLRTEVGELRKVPLKDQSIASVN 134 Query: 133 TQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNF 192 T SA DV +R +RL GE AKD RPF V + A+GT F VR+ + Sbjct: 135 TDSALDVALGTKRRDIRLIRGEAWFQVAKDK-ARPFVVEADTVRARAVGTAFGVRRYPDG 193 Query: 193 TQLDVQQHAVEVLLASAPAQKRIVNAGESLQF----SASEFGAVKPLDDESTSWTKDILS 248 ++ V + VEV AP + AG + S D +W + ++ Sbjct: 194 AEVMVSEGVVEVWNTQAPDTPIRLEAGGRVFMPYAAQPSRAEYAPETVDRRLAWREGQIA 253 Query: 249 FSDKPLGEVIATLTRY-RNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSI 307 + L A RY ++ DP + +L G F D + L V + I Sbjct: 254 LDNDSLAHAAAEFNRYNSRKIVIADPELGDEKLVGWFRADQPDTFARSVHLALDVTV-RI 312 Query: 308 TRYWINIS 315 I I Sbjct: 313 DDTRIVIG 320 >UniRef50_A3UKH4 Transcriptional regulator, putative n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UKH4_9RHOB Length = 356 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 84/337 (24%), Positives = 131/337 (38%), Gaps = 37/337 (10%) Query: 13 LRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRAL 72 +A+ W L P AR+++W D + A++Q E V + L Sbjct: 17 REAAALWSERLREAGADPDLRARFEEWCGDDPAKREAFRQAEAAWRLARSVADEPEMLEL 76 Query: 73 HDTRLTR------------RHVMKGLLLLLGAGGGWQLWQSETG-----------EGLRA 109 + L+R R + +L+ G G+ L E + Sbjct: 77 RNKVLSRAASERKPVFSAARLSVLAASVLVCVGFGFVLANWAMPGESVEPSMVIAEQAAS 136 Query: 110 DYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFR 169 D+ T G L DGS +TL T S A V F +R V L G+ A + R F Sbjct: 137 DFETQIGERLTTPLADGSTMTLGTSSRARVAFSDQERLVELVSGQAYFDVAHE-DGREFV 195 Query: 170 VLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLAS----------APAQKRIVNAG 219 VL ++TA+GT F VR + + + V V A +++ ++ G Sbjct: 196 VLAAGRRVTAVGTAFEVRVDSAQLSVTLVEGNVVVDAPVSVDQGAAGEFARSERAELSPG 255 Query: 220 ESLQFSASEFGAVKPLDDES-TSWTKDILSFSDKPLGEVIATLTRY-RNGVLRCDPAVAG 277 E L A +V +D TSW +L F D+PL +A + RY R ++ D ++ Sbjct: 256 EQLVQVADAPPSVATVDARRLTSWLDGLLIFEDEPLSAAVAEMNRYARRPIVIADEQLSA 315 Query: 278 LRLSGTFPLKNTDAILNVIAQTLP-VKIQSITRYWIN 313 LRLSG F + + +A+ P V+I I Sbjct: 316 LRLSGAFSAGQSSGFVEALAEYFPEVRIDETDHAIIL 352 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.174 0.536 Lambda K H 0.267 0.0532 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,497,598,226 Number of Sequences: 3077464 Number of extensions: 140888311 Number of successful extensions: 567628 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1985 Number of HSP's successfully gapped in prelim test: 1276 Number of HSP's that attempted gapping in prelim test: 554990 Number of HSP's gapped (non-prelim): 4341 length of query: 317 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 189 effective length of database: 646,480,964 effective search space: 122184902196 effective search space used: 122184902196 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 94 (40.4 bits)