BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (662 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P37649 Protein yhjK n=86 Tax=Enterobacteriaceae RepID=Y... 1323 0.0 UniRef50_B4SWG2 Protein YhjK n=42 Tax=Enterobacteriaceae RepID=B... 1146 0.0 UniRef50_Q1C186 Diguanylate cyclase/phosphodiesterase n=45 Tax=E... 617 e-175 UniRef50_D0ZGP0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ed... 532 e-149 UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 287 8e-76 UniRef50_C6DGQ7 Diguanylate cyclase n=5 Tax=Pectobacterium RepID... 266 2e-69 UniRef50_A1JST1 Putative membrane protein n=3 Tax=Yersinia RepID... 264 1e-68 UniRef50_C4TR37 Putative uncharacterized protein n=1 Tax=Yersini... 259 3e-67 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 245 3e-63 UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 241 9e-62 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 238 8e-61 UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 236 2e-60 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 236 3e-60 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 234 8e-60 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 234 9e-60 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 233 2e-59 UniRef50_C6XC99 Diguanylate cyclase/phosphodiesterase with extra... 233 2e-59 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 231 6e-59 UniRef50_C8QGW8 Diguanylate cyclase/phosphodiesterase withMHYT s... 231 6e-59 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 231 7e-59 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 230 1e-58 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 229 3e-58 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 229 3e-58 UniRef50_C9YG65 Uncharacterized signaling protein PA1727 n=1 Tax... 227 1e-57 UniRef50_Q1K008 Diguanylate cyclase/phosphodiesterase with PAS/P... 227 1e-57 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 227 1e-57 UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromob... 226 2e-57 UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 226 2e-57 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 226 3e-57 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 225 4e-57 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 225 4e-57 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 225 4e-57 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 225 5e-57 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 225 5e-57 UniRef50_C4KCC9 Response regulator receiver modulated diguanylat... 225 5e-57 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 224 6e-57 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 224 6e-57 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 224 7e-57 UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax... 224 7e-57 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 224 9e-57 UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=c... 224 1e-56 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 224 1e-56 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 224 1e-56 UniRef50_C6WW34 Response regulator receiver modulated diguanylat... 223 1e-56 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 223 1e-56 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 223 2e-56 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 223 2e-56 UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 223 2e-56 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 223 2e-56 UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacill... 223 2e-56 UniRef50_Q2SDG6 Predicted signal transduction protein containing... 223 2e-56 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 223 2e-56 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 223 3e-56 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 222 3e-56 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 222 4e-56 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 222 5e-56 UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Su... 221 7e-56 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 221 7e-56 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 221 8e-56 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 221 9e-56 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 221 1e-55 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 221 1e-55 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 220 1e-55 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 220 1e-55 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 220 2e-55 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 220 2e-55 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 219 2e-55 UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/P... 219 2e-55 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 219 2e-55 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 219 2e-55 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 219 2e-55 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 219 2e-55 UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (... 219 2e-55 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 219 3e-55 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 219 3e-55 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 219 3e-55 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 219 4e-55 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 219 4e-55 UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL ... 219 4e-55 UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodi... 218 4e-55 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 218 5e-55 UniRef50_Q2SF23 Predicted signal transduction protein containing... 218 6e-55 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 218 6e-55 UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 218 6e-55 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 218 6e-55 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 218 8e-55 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 218 8e-55 UniRef50_A0LAZ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 217 9e-55 UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photoba... 217 1e-54 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 217 1e-54 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 217 1e-54 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 217 1e-54 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 216 2e-54 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 216 2e-54 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 216 2e-54 UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/P... 216 2e-54 UniRef50_B1KF16 Diguanylate cyclase/phosphodiesterase with PAS/P... 216 2e-54 UniRef50_Q2SG37 Predicted signal transduction protein containing... 216 3e-54 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 216 3e-54 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 216 3e-54 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 216 3e-54 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 215 4e-54 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 215 4e-54 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 215 4e-54 UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/P... 215 4e-54 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 215 4e-54 UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 215 5e-54 UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/P... 215 5e-54 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 215 6e-54 UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/P... 215 6e-54 UniRef50_C6DFX5 Diguanylate cyclase/phosphodiesterase with PAS/P... 214 6e-54 UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/P... 214 7e-54 UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas ... 214 7e-54 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 214 8e-54 UniRef50_B8G486 Response regulator receiver modulated diguanylat... 214 8e-54 UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/P... 214 9e-54 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 214 9e-54 UniRef50_A8FY98 Signal transduction protein containing a membran... 214 9e-54 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 214 1e-53 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 214 1e-53 UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Ma... 214 1e-53 UniRef50_Q15NP6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 213 1e-53 UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 213 2e-53 UniRef50_A2SCH7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Me... 213 2e-53 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 213 2e-53 UniRef50_Q2VYM7 Predicted signal transduction protein containing... 213 2e-53 UniRef50_A7BRN3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 213 2e-53 UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/P... 213 2e-53 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 213 2e-53 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 213 2e-53 UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 213 2e-53 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 213 2e-53 UniRef50_C6PPB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 213 3e-53 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 213 3e-53 UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/P... 212 3e-53 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 212 3e-53 UniRef50_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 212 3e-53 UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 212 4e-53 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 212 4e-53 UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/P... 212 4e-53 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 212 4e-53 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 212 4e-53 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 212 5e-53 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 212 5e-53 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 212 5e-53 UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum s... 211 5e-53 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 211 5e-53 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 211 5e-53 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 211 6e-53 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 211 6e-53 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 211 6e-53 UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/P... 211 6e-53 UniRef50_A4A7P9 Sensory box/GGDEF domain/EAL domain protein n=1 ... 211 7e-53 UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Ma... 211 7e-53 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 211 8e-53 UniRef50_B8HNN4 Response regulator receiver modulated diguanylat... 211 8e-53 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 211 8e-53 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 211 8e-53 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 211 8e-53 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 211 8e-53 UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/P... 211 9e-53 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 211 9e-53 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 211 9e-53 UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria ... 211 9e-53 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 211 9e-53 UniRef50_D1RM65 Sensory box protein/GGDEF domain/EAL domain prot... 211 9e-53 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 211 1e-52 UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Di... 211 1e-52 UniRef50_Q2BKT3 Probable signalling protein n=1 Tax=Neptuniibact... 211 1e-52 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 211 1e-52 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 211 1e-52 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 211 1e-52 UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacill... 211 1e-52 UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 210 1e-52 UniRef50_Q2SDR7 Predicted signal transduction protein containing... 210 1e-52 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 210 1e-52 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 210 1e-52 UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/P... 210 1e-52 UniRef50_A4BFV7 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 210 1e-52 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 210 1e-52 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 210 1e-52 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 210 2e-52 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 210 2e-52 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 210 2e-52 UniRef50_A8FVX9 Signal transduction protein containing a membran... 210 2e-52 UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 210 2e-52 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 210 2e-52 UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 210 2e-52 UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 210 2e-52 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 210 2e-52 UniRef50_C6WYR4 Response regulator receiver modulated diguanylat... 210 2e-52 UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/P... 209 2e-52 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 209 2e-52 UniRef50_Q7NSJ7 Putative uncharacterized protein n=1 Tax=Chromob... 209 2e-52 UniRef50_C6MGV8 Response regulator receiver modulated diguanylat... 209 2e-52 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 209 2e-52 UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitrati... 209 2e-52 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 209 2e-52 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 209 2e-52 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 209 3e-52 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 209 3e-52 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 209 3e-52 UniRef50_A1SBS3 Signal transduction protein containing a membran... 209 3e-52 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 209 3e-52 UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS... 209 3e-52 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 209 3e-52 UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase wit... 209 4e-52 UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synecho... 209 4e-52 UniRef50_Q55434 Phytochrome-like protein cph2 n=1 Tax=Synechocys... 208 4e-52 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 208 4e-52 UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Le... 208 4e-52 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 208 4e-52 UniRef50_UPI0001698B39 diguanylate cyclase/phosphodiesterase wit... 208 4e-52 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 208 4e-52 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 208 5e-52 UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfuro... 208 5e-52 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 208 5e-52 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 208 5e-52 UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/P... 208 5e-52 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 208 5e-52 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 208 6e-52 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 208 7e-52 UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/P... 208 7e-52 UniRef50_Q21IJ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 207 7e-52 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 207 7e-52 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 207 7e-52 UniRef50_Q315P5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 207 8e-52 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 207 8e-52 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 207 8e-52 UniRef50_Q0AKC4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Hy... 207 8e-52 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 207 1e-51 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 207 1e-51 UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain prote... 207 1e-51 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 207 1e-51 UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 207 1e-51 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 207 1e-51 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 207 1e-51 UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 207 1e-51 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 207 1e-51 UniRef50_Q48EW2 Diguanylate cyclase, putative n=10 Tax=Pseudomon... 207 1e-51 UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 207 1e-51 UniRef50_Q1NS23 PAS:GGDEF:EAL:Response regulator receiver n=4 Ta... 207 1e-51 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 207 1e-51 UniRef50_Q1GML0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 207 1e-51 UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromob... 207 1e-51 UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales b... 207 1e-51 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 207 1e-51 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 207 2e-51 UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwell... 206 2e-51 UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax... 206 2e-51 >UniRef50_P37649 Protein yhjK n=86 Tax=Enterobacteriaceae RepID=YHJK_ECOLI Length = 649 Score = 1323 bits (3425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 649/649 (100%), Positives = 649/649 (100%) Query: 14 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL 73 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL Sbjct: 1 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL 60 Query: 74 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP 133 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP Sbjct: 61 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP 120 Query: 134 QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL 193 QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL Sbjct: 121 QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL 180 Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK 253 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK Sbjct: 181 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK 240 Query: 254 ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL 313 ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL Sbjct: 241 ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL 300 Query: 314 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA 373 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA Sbjct: 301 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA 360 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV Sbjct: 361 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 420 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 493 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER Sbjct: 421 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 480 Query: 494 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP 553 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP Sbjct: 481 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP 540 Query: 554 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQS 613 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQS Sbjct: 541 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQS 600 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK Sbjct: 601 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 649 >UniRef50_B4SWG2 Protein YhjK n=42 Tax=Enterobacteriaceae RepID=B4SWG2_SALNS Length = 668 Score = 1146 bits (2964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 559/662 (84%), Positives = 619/662 (93%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 MRVSRSLTIKQMAMVAAVV++FVF+FCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA Sbjct: 1 MRVSRSLTIKQMAMVAAVVMMFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 ILK D+P AE IL SIKPAGVVSRADVVLPNQFQALRK FIPERPVPVMVTRLFELPVQI Sbjct: 61 ILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQI 120 Query: 121 SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR 180 SL VYSLERPANPQP+AYLVLQADS+RMYKFVMS LSTLVTIYLLLSLILTVAI+WC+NR Sbjct: 121 SLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNR 180 Query: 181 LILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE 240 LI+HPLR IARELN IP +EL+GHQLALPRLHQDDEIGMLVRSYNLNQQL+QR EEQ + Sbjct: 181 LIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD 240 Query: 241 NAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV 300 NAMRFPVS+LPNKA LM +LEQV+ R+QTTAL+I+TCETLRDTAGVL+E QREILLLTLV Sbjct: 241 NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLV 300 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 EKLKSVL+PRM+L Q+SGYDFA+IA+GV+EPWHAITLGQQ+LTI++ERLPI+ IQLRP C Sbjct: 301 EKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSC 360 Query: 361 SIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 SIG+AM+YGDLTAE+LY RA+SAAFTAR KGKNQIQFFDP QMEAAQ+RLTEESDIL AL Sbjct: 361 SIGIAMYYGDLTAEELYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTAL 420 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 +NHQFAIWLQPQVEM SG ++SAE LLR+QQPDGSW+LPDGLI+RIE CGLMVTVG+WVL Sbjct: 421 DNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPDGLIERIESCGLMVTVGYWVL 480 Query: 481 EESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 EESCR LAAWQERG+ LPLSVNLSALQLMHP MV+++LELL RYRIQPGTLILEVTESRR Sbjct: 481 EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRR 540 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 IDDPHAAVAILRPLRNAGVR+ALDDFGMGYAGLRQLQHMKSLP+D+LKIDKMFV+GLP D Sbjct: 541 IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDD 600 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 SM+ AII++A+SLNLQ+IAEGVE EAQR WL +AGV +AQGFLFARP+P +IFEE YL Sbjct: 601 HSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLS 660 Query: 661 EK 662 + Sbjct: 661 HE 662 >UniRef50_Q1C186 Diguanylate cyclase/phosphodiesterase n=45 Tax=Enterobacteriaceae RepID=Q1C186_YERPA Length = 728 Score = 617 bits (1592), Expect = e-175, Method: Compositional matrix adjust. Identities = 322/664 (48%), Positives = 464/664 (69%), Gaps = 5/664 (0%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 +RV RSLTIKQMA VA V LV + IF + LFH VQQ + + A QLESIA SVR+PLS A Sbjct: 58 LRVRRSLTIKQMAAVAVVALVTICIFIILQLFHFVQQRKDDYANQLESIAYSVRQPLSEA 117 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 IL DIP+A+ IL S+ P G++SRA+V+LPNQ Q L +F ERP+P R+F LPVQI Sbjct: 118 ILSVDIPQAKKILNSLLPIGILSRAEVILPNQIQVLHANFPTERPIPHWAKRVFSLPVQI 177 Query: 121 SLGVYSLER-PANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCIN 179 ++ +Y+LER PANPQP+A+LVL+ADSFRMY+F++S LS +++ YLLL+L+L+V+I+WCIN Sbjct: 178 TVPLYALERVPANPQPLAHLVLRADSFRMYQFILSALSAMLSTYLLLALVLSVSIAWCIN 237 Query: 180 RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN 239 RLI+HPLR +A+EL I ++ HQL LP HQDDE+G+LVR+YN NQQLL Y + Sbjct: 238 RLIIHPLRAMAKELEDIGDHGVLHHQLTLPAHHQDDELGVLVRNYNRNQQLLADAYADMG 297 Query: 240 ENAMRFPVSDLPNKALLMEMLEQVVARKQTT---ALMIITCETLRDTAGVLKEAQREILL 296 + RFPV++LPN++L + +LE+ +A T L++I ETL++ +G + EAQ + LL Sbjct: 298 RISHRFPVTELPNRSLFISLLEKEIASSTRTDHFHLLVIGIETLQEVSGAMSEAQHQQLL 357 Query: 297 LTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQL 356 LT+V++++ + +LAQ+S +FAV+A G + + A+ L +++++ +++ L + I L Sbjct: 358 LTIVQRIEQCIDDSDLLAQLSKTEFAVLARGTRRSFPAMQLARRIMSQVTQPLFFDEITL 417 Query: 357 RPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 RP SIG+ + TAE + A +A A H+G+NQI F+P +E KRLT+E+D Sbjct: 418 RPSASIGITRYQAQQDTAESMMRNASTAMMAAHHEGRNQIMVFEPHLIEKTHKRLTQEND 477 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 +L A+ENH F ++LQPQ +M +++ AE LLR QPDGS+ LP G + E G+MV + Sbjct: 478 LLQAIENHDFTLFLQPQWDMKRQQVIGAEALLRWCQPDGSYVLPSGFVHFAEEEGMMVPL 537 Query: 476 GHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 G+WVLEE+CR+LA W+ RG+ LPLSVN+S LQ+ + + + L++ Y I P L+LE+ Sbjct: 538 GNWVLEEACRILADWKARGVSLPLSVNISGLQVQNKQFLPHLKTLISHYHIDPQQLLLEI 597 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TE+ +I D A+ +LR L+ G+ +ALDDFG+GY+ LR L H+KSLPI ++K+DK FV+ Sbjct: 598 TETAQIQDLDEALRLLRELQGLGLLIALDDFGIGYSSLRYLNHLKSLPIHMIKLDKSFVK 657 Query: 596 GLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 LP D ++ I ++ L ++++AEGVETE QR WL + G+ QGFLF+ PLP FE Sbjct: 658 NLPEDDAIARIISCVSDVLKVRVMAEGVETEEQRQWLLEHGIQCGQGFLFSPPLPRAEFE 717 Query: 656 ESYL 659 Y Sbjct: 718 AQYF 721 >UniRef50_D0ZGP0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Edwardsiella RepID=D0ZGP0_EDWTE Length = 668 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 284/661 (42%), Positives = 428/661 (64%), Gaps = 17/661 (2%) Query: 12 MAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEA 71 MA+V++V LV V IF + LFH VQQ + + Q++SIA+SVR PL+ A+L D+ +A+ Sbjct: 1 MALVSSVALVIVCIFTVIQLFHFVQQRKDDYGQQMQSIAQSVRLPLADAMLNMDVAKAQQ 60 Query: 72 ILASIKPAGVVSRADVVLPN-QFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERP 130 IL ++ +G+++RAD+VLP+ + Q LR F RPVP RLF LP+Q+S +Y ++R Sbjct: 61 ILDGLRASGILARADIVLPHHEVQVLRGHFPAARPVPRWAGRLFHLPLQLSTPLYGVDRG 120 Query: 131 -ANP-QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRN 188 A P P+ YL+LQ DSFR+Y+F+++T +T+V+ YLLL+LILTVA+SWC+NRL++HPLR Sbjct: 121 RATPDHPLGYLILQVDSFRLYRFILTTFATMVSTYLLLALILTVAVSWCMNRLLVHPLRA 180 Query: 189 IARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVS 248 +AREL ++P + HQL LP H DDE+G+LVR+YN NQQ L++ + ++ + R+P + Sbjct: 181 LARELRSMPLEAPHYHQLPLPPHHSDDELGLLVRTYNRNQQALEKTRQTMSQLSTRYPQT 240 Query: 249 DLPNKALLMEMLEQVV-ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 +LP +AL + +LEQ A ++ +M+++ TL++ GVL QR++LL+TLVE+L Sbjct: 241 NLPGQALFVSLLEQQCQAEREGQCVMMVSIPTLQEAMGVLDGGQRDMLLMTLVERLHEGT 300 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 SP +LAQ S F ++A P A+ Q++++++++ + ++ + LRP +IG+AM Sbjct: 301 SPASLLAQASQDGFLILARDAARPSDAMQQAQRLMSLLTQPVTLDNLALRPTAAIGIAMR 360 Query: 368 YGDLTA----------EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 L E+L ++A SA A GKN++ FF+PQ E + RLT+E++IL Sbjct: 361 RPSLETSEAECELSPTERLLTQARSALNMALTDGKNRVLFFEPQLAERVKARLTQENEIL 420 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 NAL F ++LQPQ+++ S +L AE L+R + DG P I E G +V +G Sbjct: 421 NALRQGDFELYLQPQIDLRSQRLAGAEALIRWHRQDGGCSEPSQFIPLAEEQGGIVALGE 480 Query: 478 WVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 WVL+E+ R+L WQ RG+ +PLS+N+SALQL+ + LL ++ I L LE+TE Sbjct: 481 WVLKEAVRILVDWQRRGLTIPLSLNVSALQLVDARFGQRLETLLQQHAISAQRLHLEITE 540 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 + I D A L LRN GVRVALDDFGMGYAGL L+H LP+D+LKIDK F++ + Sbjct: 541 TAYISDIRRAADTLDRLRNQGVRVALDDFGMGYAGLNYLRH---LPVDILKIDKSFIDQI 597 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 P D +++ + +A+ L+L ++AEGVET+ Q DWL G+ AQG+ F+ L F Sbjct: 598 PLDGALVRIVGSIAEVLSLDVVAEGVETQGQCDWLLANGIHYAQGYFFSPALSQRDFLAK 657 Query: 658 Y 658 Y Sbjct: 658 Y 658 >UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q0HLF7_SHESM Length = 684 Score = 287 bits (735), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 202/676 (29%), Positives = 354/676 (52%), Gaps = 34/676 (5%) Query: 5 RSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKG 64 +SLT KQ +V L F V + +V + T + + SV +P ++A+ Sbjct: 6 KSLTWKQTNLVVFTALFFAIAIFVVEIALVVIATKQQLTTTQQELLDSVEQPAANAVWAL 65 Query: 65 DIPEAEAIL-ASIK----PAGVVSRAD----VVLPNQFQALRKSFIPERPVPVMVTRLFE 115 D A L +IK + V+ D V + N + ++FI + +LF+ Sbjct: 66 DDNLARQTLEGAIKVEHVGSAVIELDDGSMFVSVSNNKKNDSQTFIS------LSNKLFD 119 Query: 116 LPVQISLGVYS---LERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTV 172 +IS +Y E Q I L + D+ + + S L L +L+LT+ Sbjct: 120 DLKEISRPLYRPFYFEGTQKQQLIGTLTIFYDTQELTNTLFSQLRFSFFATLARALLLTL 179 Query: 173 AISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ 232 +S +R + P+ I+ ++ I + L + H+DDE+G++ +N Q+L Sbjct: 180 VLSVVFHRFLTQPIARISEAIDKISPDSPDENLLPMSNAHKDDELGLVTSKFN---QILI 236 Query: 233 RHYEEQNE---NAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAG 285 + + Q++ A R P++ LPN+ LL+E + + R K + ALM I + ++ Sbjct: 237 QFSQTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFALMFIDLDRFKNIND 296 Query: 286 VLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIM 345 L A + L + L+ V+ + ++++ G +F ++A+ V P A ++L + Sbjct: 297 SLGHALGDQFLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPDQAADFVDKLLVQL 356 Query: 346 SERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + + + + P SIG++++ D +AE L A A ++A+ G NQ FF Q E Sbjct: 357 NVPIQLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTE 416 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 A RL E+ + +AL+N++F ++ QP++++ +GK+ E L+R Q+ DG P I Sbjct: 417 RAAVRLRTEASLHDALKNNEFLLYFQPKLDLQTGKITGCEALIRWQK-DGRLISPISFIP 475 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTR 523 E G+++ +G WV+E+SCR+L WQ++ +P+++N+++ Q ++V+D+ ++ R Sbjct: 476 VAEETGIIIPIGRWVIEQSCRVLREWQKKYNFAIPIAINVASQQFADASLVSDIKQMALR 535 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 Y+IQP L +E+TE+ ++D A+ L L++AG +A+DDFG GY+ L L+H LP Sbjct: 536 YQIQPELLEIEITETSLMNDIELAINKLEQLKSAGFGIAVDDFGTGYSSLSYLRH---LP 592 Query: 584 IDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 I +KID+ FV LP DS++ + I+ML + LNL ++AEG+E E Q DWL + I QGF Sbjct: 593 ITTMKIDRCFVSDLPEDSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKRNQCQIGQGF 652 Query: 644 LFARPLPIEIFEESYL 659 F++PLP FE Y+ Sbjct: 653 YFSQPLPQAEFEALYI 668 >UniRef50_C6DGQ7 Diguanylate cyclase n=5 Tax=Pectobacterium RepID=C6DGQ7_PECCP Length = 394 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 164/409 (40%), Positives = 236/409 (57%), Gaps = 34/409 (8%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 MR+ RSLTIKQM V+AV LV + +F + LFH V Q R + + QLESIA SVR+PL+ A Sbjct: 1 MRLRRSLTIKQMTAVSAVALVTISLFIVIQLFHFVHQRREDYSRQLESIAYSVRQPLTDA 60 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 +L+G++ A IL S+ P +SRADV+LP+ FQ L +F ERPVP + R+F LP++I Sbjct: 61 VLQGEVQRAGNILDSLLPVAFLSRADVLLPDDFQTLHANFPKERPVPDWIARVFRLPIRI 120 Query: 121 SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR 180 S+ +YS + P+A+LVLQADS+RMY+F++ST ST++ YLLL+LI+++AI+WC+NR Sbjct: 121 SIPLYSPPQTQYSAPLAHLVLQADSYRMYQFIVSTFSTMLATYLLLALIMSIAITWCMNR 180 Query: 181 LILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE 240 L++HPLR I EL +P ++ L LP H DDE+G LVRSYN NQQLL++ E Sbjct: 181 LLIHPLRGIIIELQNLPPDAMLHRPLTLPPWHHDDELGALVRSYNRNQQLLEQSLSAGTE 240 Query: 241 NAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV 300 LP+KA M LEQ +A +L++ G+ A ++ + TL Sbjct: 241 GV------GLPDKAHFMRRLEQRLADATPFSLLVF---------GLDSSASKQGDMATLA 285 Query: 301 EKLKSVLSPR-----MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQ 355 +L+ V+ + LA++ +FA+I + A Q V+ ++ LP Sbjct: 286 TQLRVVIEEQNEAGLTCLARLDCDEFALIGKTLGSAGQAQDWAQNVM--LAINLPFLPAD 343 Query: 356 LRPHCSIGVAMFYGDLT--------AEQLYSRAISAAFTARHKGKNQIQ 396 +P ++ V G LT A L S+A A ARH K I Sbjct: 344 AQPARAVSV----GILTITDPRPEAAALLLSQARFAMQLARHDKKCGIH 388 >UniRef50_A1JST1 Putative membrane protein n=3 Tax=Yersinia RepID=A1JST1_YERE8 Length = 509 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 144/238 (60%), Positives = 184/238 (77%), Gaps = 1/238 (0%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 MRV RSLTIKQMA VA V LV + IF + LFH VQQ + + A QLESIA SVR+PLS A Sbjct: 1 MRVRRSLTIKQMAAVAVVALVTICIFIVLQLFHFVQQRKDDYAKQLESIAYSVRQPLSEA 60 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 IL DIP+A+ IL ++ P G++SRADV+LPNQ Q L SF ERPVP R+F LPVQI Sbjct: 61 ILSVDIPQAKNILNNLLPIGILSRADVILPNQIQVLHASFPTERPVPRWAKRIFALPVQI 120 Query: 121 SLGVYSLER-PANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCIN 179 ++ +YSLER ANPQP+A+LVLQ DS+RMY+F++STLS +++ YLLL+L+L+V+I+WCIN Sbjct: 121 TVPLYSLERVSANPQPLAHLVLQVDSYRMYQFILSTLSAMLSTYLLLALVLSVSIAWCIN 180 Query: 180 RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE 237 RLI+HPLR +A+EL I + ++ HQL +P HQDDE+G+LVR+YN NQQLL Y E Sbjct: 181 RLIIHPLRAMAKELEHIGQQGVLNHQLTMPAHHQDDELGILVRNYNRNQQLLTEAYTE 238 Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 117/274 (42%), Positives = 178/274 (64%) Query: 385 FTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAE 444 T + ++IQ D + QK+L +E+DIL A+E F ++LQPQ +M +++ AE Sbjct: 232 LTEAYTEMSRIQSTDRSSLHKTQKQLAQENDILQAIERRDFVLFLQPQWDMEERRIIGAE 291 Query: 445 VLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLS 504 LLR +Q DGS+ LP + E G M+ +G WVLEE+CR+LA W+ +G+ L L+VN+S Sbjct: 292 ALLRWRQADGSYLLPSEFVPDAEESGAMMPLGSWVLEEACRILADWKAQGMNLSLAVNIS 351 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 LQ+ +++ + ++ RY I P L+LE+TE+ +I + AA +LR L+ G+ +ALD Sbjct: 352 GLQIQCDSIITHLKTVIGRYNIDPSQLVLEITETAQIQNLDAAYVLLRELQGLGLSIALD 411 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVE 624 DFG GY+ L+ L H+KSLP++++K+DK FV+ LP D +M I ++ L L+++AEGVE Sbjct: 412 DFGTGYSSLQYLNHLKSLPVNIIKLDKSFVKHLPEDDAMARIISTISDVLKLRVMAEGVE 471 Query: 625 TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 TE QR WL K G+ QGFLF+ PL E F+ + Sbjct: 472 TEEQRQWLLKHGIRCGQGFLFSEPLSREEFDTRF 505 >UniRef50_C4TR37 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TR37_YERKR Length = 513 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 148/259 (57%), Positives = 193/259 (74%), Gaps = 9/259 (3%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 +RV RSLTIKQMA VA V LV + IF + LFH VQQ + + A QLESIA SVR+PLS+A Sbjct: 5 LRVRRSLTIKQMAAVAVVALVTICIFIVIQLFHFVQQRKDDYAKQLESIAYSVRQPLSAA 64 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 IL DIP+A+ IL ++ P G++SRADV+LPNQ Q L +F ERPVP R+F LPVQI Sbjct: 65 ILSVDIPQAKNILNNLLPIGILSRADVILPNQIQVLHANFPTERPVPRWAKRIFSLPVQI 124 Query: 121 SLGVYSLER-PANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCIN 179 ++ +YSLER ANPQP+A+LVL+ADSFR+Y+F++STLS +++ YLLL+L+L+V+++WCIN Sbjct: 125 TVPLYSLERVSANPQPLAHLVLRADSFRLYQFILSTLSAMLSTYLLLALVLSVSLAWCIN 184 Query: 180 RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN 239 RLI+HPLR IA+EL I + ++ HQL LP HQDDE+G+LV +YN NQQLL Y Sbjct: 185 RLIVHPLRAIAKELEKIGQQGVLNHQLTLPAHHQDDELGVLVHNYNRNQQLLAEAYA--- 241 Query: 240 ENAMRFPVSD---LPNKAL 255 M P+S LP+K L Sbjct: 242 --GMSSPLSTELPLPHKTL 258 Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 118/251 (47%), Positives = 171/251 (68%) Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 K+ ++E+DIL A+E F ++LQPQ +M + +++ AE LLR +Q DGS+ LP I E Sbjct: 259 KQSSQENDILQAIEKRDFVLFLQPQWDMEAPRIIGAEALLRWRQADGSYRLPSEFITDSE 318 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 G M+ +G+WVLEESC +LA W+ RGI L L+VN+S LQL +++ + +L+RY I Sbjct: 319 ESGAMIPLGNWVLEESCGILADWKARGITLSLAVNISGLQLQCESILTHLQTILSRYDID 378 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 P L+LE+TE+ RI D A+ +LR L+ G+ +ALDDFG GY+ L+ L H+KSLPI+++ Sbjct: 379 PRQLVLEITETARIQDLDKALMLLRELQGLGLSIALDDFGTGYSSLQYLNHLKSLPINII 438 Query: 588 KIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFAR 647 K+DK FV+ LP D M I +++ L L+++AEGVET+ QR WL K G+ QGFLF+ Sbjct: 439 KLDKSFVKYLPEDDVMARIISTISEVLKLRVMAEGVETDEQRQWLLKQGIRCGQGFLFSE 498 Query: 648 PLPIEIFEESY 658 PL E FE + Sbjct: 499 PLSREEFETRF 509 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 135/418 (32%), Positives = 234/418 (55%), Gaps = 12/418 (2%) Query: 247 VSDLPNKALLMEMLEQVVARKQTTALMI----ITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L + L Q + +K+ + M+ + + + L ++LL + ++ Sbjct: 439 LTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGHHTGDMLLKEVADR 498 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+ V+ ++++ G +F +I + + P ++ + +++L + S +E+ ++ S+ Sbjct: 499 LRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSAPFRLEKHEMFITASM 558 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GV ++ D TAE+L A +A + A+ +G+N QFF + +RL+ E+ + +AL Sbjct: 559 GVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQFFSEEMNSRVSERLSMETGLRHALA 618 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++F + QP+V T+G++V E L+R QQP LPD I E GL++ +G WVL Sbjct: 619 RNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPIGEWVLR 678 Query: 482 ESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +C AWQE G + +SVN+S Q H N+ + +L +QP L LE+TES Sbjct: 679 NTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELEITESVI 738 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG- 599 + +P A+++L L+ G+ +A+DDFG GY+ L L K LP D+LKIDK FV G+PG Sbjct: 739 MLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLL---KRLPADILKIDKSFVSGIPGN 795 Query: 600 --DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D +++A II L ++ L ++AEGVE + Q +L + QG+ F++PLP E + Sbjct: 796 KSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAETLQ 853 >UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR44_RHORT Length = 678 Score = 241 bits (614), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 151/529 (28%), Positives = 268/529 (50%), Gaps = 27/529 (5%) Query: 136 IAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNA 195 + ++ + D + + L+ V L++ L++ + S + I P+ +AR + Sbjct: 142 VGFVFITFDKDHFIRGIADRLADQVLGILVIVLVVALTTSIVFHLFISRPIIRVARGVAD 201 Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNEN---AMRFPVSDLPN 252 + ++ L +PR HQ +EIG + N LL R E Q E A R P++DLPN Sbjct: 202 VDPEDPAATVLTVPRAHQRNEIGRMTNRLN---HLLGRLAEVQGELRLLATRDPLTDLPN 258 Query: 253 KALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 ++L++EM++ + R A+M + + + L +++L + + +V++ Sbjct: 259 RSLILEMMDATINRVALDGGRCAVMFLDLDMFKHVNDSLGHEAGDLILKDIGRRFDAVVA 318 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 + ++ G +F V+ + + + ++++T + + ++ + S+G+A + Sbjct: 319 GLGAVGRLGGDEFVVLIDRYEREDDLARIARRLITTVKRPIEVDGTLVHSSTSVGIACYP 378 Query: 369 GD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 D T + L A +A + + G Q FFD E A RL E+ + +A+E QF + Sbjct: 379 VDGATPQGLLRNADTAMYAVKASGPGQWAFFDRSMTENALVRLRTEASLRSAIEKGQFVL 438 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL------PDGLIDRIECCGLMVTVGHWVLE 481 QP++++ S ++ E L+R WDL P I E G++ +G WVL Sbjct: 439 HYQPKLDLRSNRISGCEALIR-------WDLNGDLVPPGRFISIAEETGMIYDIGLWVLR 491 Query: 482 ESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 E+C+ W+ +P+++N+S QL + D L+++ P L +EVTES + Sbjct: 492 EACQAQRRWRRHAGAVPIAINVSVRQLKDERFIDDFLDIIQASGADPELLEVEVTESALM 551 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS 601 + +LR +R+ GVR+++DDFG GY+ L ++K+LPID+LKID+ FV LP +S Sbjct: 552 SSIEVSAHLLREMRSHGVRLSIDDFGTGYS---SLAYLKNLPIDILKIDRSFVSDLPEES 608 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 S+ II LA + L+ +AEG+ETE Q WL G + QGFL +PLP Sbjct: 609 SIPRMIIGLAGQMGLRTVAEGIETEGQLAWLRDNGCDMIQGFLIEKPLP 657 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 143/437 (32%), Positives = 237/437 (54%), Gaps = 25/437 (5%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 +++LPN+ L ++ LEQ + R+ + A++++ + + L ++L+ L E Sbjct: 216 LTNLPNRILFVDRLEQSIGRRASRDAHLAVILLDLDNFKRVNDSLGHKSGDLLIKQLGED 275 Query: 303 LKSVL------------SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLP 350 L+ V + + L+++ G +F +I + V + + Q ++ ++S Sbjct: 276 LRKVFLGNELARRYGIEASSITLSRLGGDEFGIILDEVDSLDLVVRIVQHLIEVISREHD 335 Query: 351 IERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKR 409 IE Q+ CS+G+++F Y A+ L A +A + A+ +G+N QF+ ++ Sbjct: 336 IEGHQVFLTCSVGISVFPYDGDDADTLIKNADAAMYDAKQRGRNSFQFYTKDINSQTYRQ 395 Query: 410 LTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECC 469 L E+ ++ AL +F + QPQV++ SG++V AE L+R + P+ P I E Sbjct: 396 LILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRWRHPEKGLQPPANFIAIAEET 455 Query: 470 GLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQP 528 G++ +G WVL++ C+ + G +P +S+NLSA Q ++V + I P Sbjct: 456 GIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQFRQSDLVEQCRNTIRSAGIAP 515 Query: 529 GTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLK 588 + LE+TES + D AV +LR L GVR+A+DDFG GY+ L L+H PID LK Sbjct: 516 AYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLKH---FPIDTLK 572 Query: 589 IDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLF 645 IDK FV +PG D +++ AI+ LA+SL L+++AEGVET Q +L + G I QG+ F Sbjct: 573 IDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQGYFF 632 Query: 646 ARPLPIEIFEESYLEEK 662 +RPLP E F E YL+ K Sbjct: 633 SRPLPFEGFRE-YLKGK 648 >UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U286_MARAV Length = 692 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 161/545 (29%), Positives = 280/545 (51%), Gaps = 28/545 (5%) Query: 126 SLERPANPQPI-AYLVLQADSFRMYKF----VMSTLSTLVTIYLLLSLILTVAISWCINR 180 SL R +NP + YL + D+ + + T ++ + + L+L ++L V + R Sbjct: 134 SLTRGSNPDLVYGYLEVHYDTAPYARTWLGRALVTFASGIALALILGIVLFVVFHLLLTR 193 Query: 181 LILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNL------NQQLLQRH 234 +L ++++ + A P LV ++P H+ DE+G+ V + N + Q R Sbjct: 194 PLLRIVQSVKKVDPAHPDDRLV----SIPEGHRADELGLWVNATNNLLVAIGDTQKKHRE 249 Query: 235 YEEQNENAMRFP-VSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKE 289 E++ R+ ++ LP++ ME L+ + R Q + ALM+ + + Sbjct: 250 AEDRVTRLARYDTLTGLPSRDAFMEDLQGAIERAQEGHSSIALMVCGIDDFKSVNEQCGF 309 Query: 290 AQREILLLTLVEKLKSVLSP-RMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 + +L T+ +L + LS R +A++ F ++ +++ + A ++VL + Sbjct: 310 RTGDTILQTVASRLTANLSSDRFNVARLGSDQFVIVEKHLRDGFQAAETAEKVLATIGSP 369 Query: 349 LPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + ++ ++G+++F D A++L A A+ G N QF+ + + Sbjct: 370 INSGNHRISMTATLGISLFPSDADQADRLLQSAEQTMALAKQTGHNHFQFYVASIDKEIR 429 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +R E D+ AL NH+F + QPQ+ + + +++ AE LLR + P+ PD I E Sbjct: 430 ERKQMEKDLAQALANHEFHLVYQPQINLETRRVIGAEALLRWEHPEHGMIPPDLFIPVAE 489 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 G +V +G WVL+++C A W G L ++VNLSA+QL ++V D+L L R+ I Sbjct: 490 ANGSIVEIGQWVLDQACWQAARWASEGTHLRIAVNLSAVQLRQESIVDDILNTLKRHNIP 549 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 G L LEVTE+ + + AVA L L AG+ +A+DDFG GY+ L ++K +P+ L Sbjct: 550 AGRLELEVTETSFMTNLTDAVAKLHRLHRAGISIAVDDFGTGYSS---LTYLKQMPVQHL 606 Query: 588 KIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFL 644 KIDK F+ L D+ + II L +SLNL ++AEGVET Q +L++ G +AQG+ Sbjct: 607 KIDKQFIRDLLINEEDTRIANTIIDLGKSLNLTVVAEGVETAEQEYYLSQRGCALAQGYF 666 Query: 645 FARPL 649 F++PL Sbjct: 667 FSKPL 671 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 158/455 (34%), Positives = 239/455 (52%), Gaps = 21/455 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVA----RKQTTA 271 G L + + + QR ++ + + F P+++LPN+ LL++ LEQ +A +Q Sbjct: 531 GDLTHWVAVGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQALADCTITRQEGV 590 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 LM I + + + ++ ++LL + +LK + +A++ G +F V+ + Sbjct: 591 LMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGDEFVVMLQDLGTQ 650 Query: 332 WHAIT-----LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSRAISAAF 385 A T + ++VL + E + Q SIGV F + +L +A A + Sbjct: 651 PEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMY 710 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N + FFDP + +D+ L HQF + QPQV+ ++ E Sbjct: 711 QAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQVDREQ-RITGVEA 769 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER--GIMLPLSVNL 503 LLR + P P I E GL++ +G WVLE++C LA WQ+R L ++VN+ Sbjct: 770 LLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNV 829 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S Q HP+ V ++ + IQP L LE+TES D A+A + L+ GV +AL Sbjct: 830 SVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLAL 889 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFGMGY+ L ++K LP+D LKIDK F+ + P D+++ +AII LAQSL L +IA Sbjct: 890 DDFGMGYS---SLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIA 946 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 EGVETEAQR +LA G G QGFLF PLPI FE Sbjct: 947 EGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFE 981 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 234 bits (597), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 138/417 (33%), Positives = 227/417 (54%), Gaps = 11/417 (2%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLL 297 A P++ LPN+AL M+ LE +AR + A++ I + + L + LL Sbjct: 657 AFHDPLTGLPNRALFMDRLEHALARAGRSGDVLAVLFIDLDNFKFVNDSLGHEAGDRLLA 716 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + +L P +A++ G +F V+ G+ + A + +V ++ E + +L Sbjct: 717 LVARRLSGATRPGDTVARLGGDEFTVLLEGIADGGEAARVAGRVAEVLREPFRVAGRELF 776 Query: 358 PHCSIGVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 S+G+++ G + E+L A A + A+ +GK++ + FD A RL E+D+ Sbjct: 777 VSASVGISVSTAGSGSVEELMRGADLAMYEAKREGKDRYRVFDFGMSRTAHDRLRLENDL 836 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 A+ + ++ QP V + G++V+ E LLR + P LPD + E G++V +G Sbjct: 837 RRAVGRDELRLYYQPVVRLGDGRVVAFEALLRWEHPRRGILLPDRFVPLAEETGMIVGIG 896 Query: 477 HWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 VLE +C A W+ + L +SVN+SA QL+ P+ V ++ +L R ++P L+LEVT Sbjct: 897 RRVLELACSRAAGWRRQEPSLAVSVNISARQLVRPDFVEEVGRILQRTGLEPEGLVLEVT 956 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 ES +D+P A L+ LR GVR+ALDDFG GY+ L +++ LP+ LKID+ FVEG Sbjct: 957 ESAAMDEPGEAARALQRLRERGVRLALDDFGTGYS---SLSYLRRLPVCFLKIDRSFVEG 1013 Query: 597 LPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 L GDS ++ +I L++ L + +AEG+ET Q + L + G + QG+ FA P+P Sbjct: 1014 LGGDSGSGVLVGGVIALSRELGFEPVAEGIETPGQLERLLELGCELGQGYYFASPMP 1070 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 156/460 (33%), Positives = 242/460 (52%), Gaps = 21/460 (4%) Query: 215 DEIGMLVRSYNLNQQLLQRHY-EEQNENAMRF-PVSDLPNKALLMEMLEQVVARKQTT-- 270 D GM+ + L QR EE+ EN F P++ LPN+ LL++ L+Q +A + Sbjct: 431 DRNGMVTNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVT 490 Query: 271 --ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++ I + + ++LL + ++L S + +++ G +F V+ G Sbjct: 491 NGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGF 550 Query: 329 QE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAIS 382 E A T+G+Q+ + + I + SIG +F + ++L +A Sbjct: 551 DENPLDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADI 610 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVS 442 A + A+ +G+N ++FFDPQ E KR E D+ A+ENHQF + Q QV+ S Sbjct: 611 AMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVD-ESRHPFG 669 Query: 443 AEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE--RGIMLPLS 500 AE L+R P+ PD I E L++ +G+WVLE +C + WQ + LS Sbjct: 670 AEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLS 729 Query: 501 VNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVR 560 VN+SA Q + V + L+ +Y I P L LE+TES +D+ +A + L+ GV+ Sbjct: 730 VNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVK 789 Query: 561 VALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQ 617 +LDDFG GY+ LQ++K LP+D LKID+ FV + D+S ++ II +A SL+L Sbjct: 790 FSLDDFGTGYSS---LQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLD 846 Query: 618 MIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 +IAEGVETE Q+ L+ G QG+LF +P+PIE FE S Sbjct: 847 VIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETS 886 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 139/430 (32%), Positives = 234/430 (54%), Gaps = 13/430 (3%) Query: 231 LQRHYEEQNEN-AMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAG 285 +++ YE++ E+ + ++ L N+ LL + ++Q + ++ TA+ ++ + + Sbjct: 322 IRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVIND 381 Query: 286 VLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIM 345 L +Q + +LL + E+L + +SP L+++ G +FA++ V P A + Q++L Sbjct: 382 SLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAF 441 Query: 346 SERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + P+ +LR SIG +++ D +E L A +A + A+ +G N QF + Sbjct: 442 EQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCSEEMDT 501 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 A K L E D+ AL+ F + QP+V++ SGK+ E L+R PD PD I Sbjct: 502 RAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIP 561 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTR 523 E GL++ +G WVL E+CR AWQ +G+ + ++VNLSA Q + + V + +L Sbjct: 562 LAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHE 621 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 + I P L LE+TES ++DP +L L+ G ++LDDFG GY+ L +++ P Sbjct: 622 FDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYS---SLNYLRRFP 678 Query: 584 IDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 ID LKID+ F+ + D +S+ ++I +A SL + IAEGVET Q +LA Sbjct: 679 IDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSI 738 Query: 641 QGFLFARPLP 650 QG+LF++PLP Sbjct: 739 QGYLFSKPLP 748 >UniRef50_C6XC99 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XC99_METSD Length = 682 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 189/660 (28%), Positives = 324/660 (49%), Gaps = 40/660 (6%) Query: 14 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL 73 +V A L+ VF V+L Q + L + A ++ LS+A+ D A+ IL Sbjct: 21 IVTATALIVVF---AVMLVFQYQSALTDIENDLNAQAEILKSNLSAAVAFEDKKTADEIL 77 Query: 74 ASIKPAGVVSRADVVLPN--QFQALRKSFIPERP-VPVMVTRLFELPVQISLGVYSLERP 130 +S++ ++RA+V L N +F K P P + + T L + + Y L Sbjct: 78 SSLRLVPSINRAEVYLYNGSRFSHYAKEANPHAPDIRIPYTGLHRMNRR-----YELILE 132 Query: 131 ANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIA 190 P I Y+ + + + + +V + LL+++ I+ +N LI PL ++ Sbjct: 133 QKPLAILYIEINLNKLNAR---LGLFALVVLMAGLLAMLAARLIAARLNLLITEPLSSLT 189 Query: 191 RELNAIPAKELVGHQLALPRLHQDDEI-----GMLVRSYN----LNQQLLQRHYEEQNEN 241 ++ + A++ G + + R + + GML+ YN L +L QR E+ + Sbjct: 190 TFVSRVSAEQNYGLRTNMARRDEFGTLAKGIDGMLLSLYNHGKRLEDELSQRKLAEEQLD 249 Query: 242 AMRF--PVSDLPNKALLME----MLEQVVARKQTTALMIITCETLRDTAGVLKEAQREIL 295 + + V+ LPN+ E MLE R+Q+ LM I + + L + L Sbjct: 250 KLAYYDTVTHLPNRHFFNEQLTLMLEHAAQRQQSCYLMFIDLDNFKSVNDTLGHLAGDSL 309 Query: 296 LLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI-TLGQQVLTIMSERLPIERI 354 L ++ L P IL +I G +FA+I +P AI ++ + SE+ I Sbjct: 310 LREAGSRILQTLVPGSILCRIGGDEFAIILR--DQPLSAIDATASAIIALFSEKFVINAH 367 Query: 355 QLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEE 413 ++ SIG++ F D L A +A + A+ GKN +++ + ++A ++ Sbjct: 368 EVFVGASIGISNFPADADHVSGLLRNADTAMYWAKADGKNTFRYYSRELEDSAHQQEKLM 427 Query: 414 SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMV 473 S + AL H+ ++ QP + + + K+V E LLR QP+ PD I E GL++ Sbjct: 428 SMLQKALPGHELELYYQPIMALETRKIVGFEALLRWHQPELGNIRPDVFIPLAEASGLIM 487 Query: 474 TVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 +G WVLE +C AWQER L ++VN S Q HPN+V +++ ++ + + L Sbjct: 488 QIGEWVLETACLQAKAWQERYASGLIMNVNFSGRQFHHPNIVQNIVNMVNKVGLDARLLN 547 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 +E+TES +D + + LR AG+ +A+DDFG GY+ + +++ PI+ +KID+ Sbjct: 548 IELTESVLMDQSSVMIEKMHMLRQAGLDIAIDDFGTGYS---SMSYLRQFPINTIKIDRS 604 Query: 593 FVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 F++GLP D S++ AI+ LA++L L +AEGVET+AQ ++L G QG+LF+ P+ Sbjct: 605 FIKGLPDDPEGSAIAQAILALAKTLKLSAVAEGVETQAQAEFLRANGCEKIQGYLFSPPV 664 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 144/431 (33%), Positives = 242/431 (56%), Gaps = 13/431 (3%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGV 286 L R E + A+ ++ LPN+ LL + LEQ + + + A++ + + + Sbjct: 252 LARANRELIQLALHDNLTKLPNRMLLDDRLEQAIQQAIRDDRRFAVLFMDLDGFKAVNDA 311 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 ++LL+ + E++++ + + +A++ G +F ++ +EP A TL ++++ +S Sbjct: 312 YGHHLGDLLLIEVAERIRANVRAQDTIARLGGDEFVLLIE-AREPADAATLAEKLVKRIS 370 Query: 347 ERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + I R ++R SIG+A++ GD T +L A +A + A+ +G+N FF+ Sbjct: 371 QPYQISRHEVRISASIGIALYPGDGQTRHELMINADAAMYHAKDQGRNGYCFFESSMNAN 430 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 AQ++L D+ ALE Q + QP+V +G ++ E LLR + P P + Sbjct: 431 AQEQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMIGVEALLRWEHPQHGLITPGQFLPL 490 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRY 524 E GL+V +G WVL+E+CR + W + G ++VNLSALQ H +V + L R+ Sbjct: 491 AEKTGLIVQIGEWVLDEACRQMRLWLDGGHADWNIAVNLSALQFAHAGLVDSVRNALLRH 550 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 ++P LILEVTES + D A++ IL L GV +++DDFG GY+ L ++K LP Sbjct: 551 SLEPSHLILEVTESTAMRDADASLVILEQLSAMGVGISIDDFGTGYS---SLLYLKRLPA 607 Query: 585 DVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 LKID+ F+ L DS ++++AI+ L ++LNL+++AEGVETEAQ+++L + G Q Sbjct: 608 SELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVETEAQQEFLTRLGCNSLQ 667 Query: 642 GFLFARPLPIE 652 GFL RP+P E Sbjct: 668 GFLLGRPMPAE 678 >UniRef50_C8QGW8 Diguanylate cyclase/phosphodiesterase withMHYT sensor n=1 Tax=Pantoea sp. At-9b RepID=C8QGW8_9ENTR Length = 699 Score = 231 bits (589), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 144/439 (32%), Positives = 240/439 (54%), Gaps = 21/439 (4%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGV 286 L+ E + AM ++ LPN+ LL + L+ V QT ALM + + + Sbjct: 248 LKHANNELRQLAMHDNLTTLPNRVLLEQQLDAAVKHATLNDQTFALMFMDLDGFKAVNDT 307 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIA---NGVQEPWHAITLGQQVLT 343 + LL+ + +L++ L +ILA++ G +F +++ +G+Q A T+ Q+++ Sbjct: 308 WGHHVGDCLLVAVAARLRNQLREDVILARLGGDEFVLLSPDSDGLQ----AATIAQRLVN 363 Query: 344 IMSERLPIERIQLRPHCSIGVAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 + ++R LR S+G+ +F +G E +++ A SA + +H G+N F+P Sbjct: 364 TIDAPFELDRYSLRVSLSVGIVIFPLHGRSKQEMMFN-ADSAMYHTKHSGRNGWCLFEPA 422 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 AQ +L +D+ +ALE+ + ++ QP+ L+ E LLR Q P +PD Sbjct: 423 MSTVAQHQLALANDLWHALEHQEMRLFYQPKFRAGGTLLMGFEALLRWQHPRRGLLMPDM 482 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSALQLMHPNMVADMLEL 520 + R E G ++ +G+WV+ E+CR L W E G +SVNLSALQ +++ + E+ Sbjct: 483 FLPRAEKTGQIIALGNWVINEACRQLRQWHEEGNSHWSVSVNLSALQFHQRDLIDSLREI 542 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L R+ + G L+LE+TE+ + DP + + L GV+VA+D+FG+GYA L L+H++ Sbjct: 543 LQRHSLPEGALMLEITETIAMRDPQFSQQRIAELHQLGVKVAIDNFGIGYANLLHLKHLE 602 Query: 581 SLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 + LKID+ F+ L DS ++++A+I LAQSLNL+M+AEGVETE Q+ L G Sbjct: 603 ATE---LKIDRSFINSLRADSEDATVVSAMITLAQSLNLRMVAEGVETEEQQRLLTGLGF 659 Query: 638 GIAQGFLFARPLPIEIFEE 656 QG+L +P P + E Sbjct: 660 DTLQGYLLGKPTPADRISE 678 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 231 bits (589), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 147/420 (35%), Positives = 234/420 (55%), Gaps = 12/420 (2%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVA---RKQTT-ALMIITCETLRDTAGVLKEAQREILLL 297 A P++ L N+ L L+Q +A R+Q T A++ + + + L A + LL+ Sbjct: 784 AYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLV 843 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + +L+ + I+A++ G +F V+ V + A + ++L + R I L Sbjct: 844 EVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALH 903 Query: 358 PHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG++++ D A+ L A +A + A+ +G++ +QFF P+ ++ KRL + D+ Sbjct: 904 TTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDL 963 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 A+E QF + QPQ+ TSG++V E L+R Q P P I E GL++ +G Sbjct: 964 RVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLG 1023 Query: 477 HWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVL E+CR L W++ GI L ++VNLSA QL P ++ + L + ++ L LE+ Sbjct: 1024 EWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEI 1083 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV- 594 TES + D A++A L+ LR+ G+ +++DDFG GY+ L ++K LPID LK+D+ FV Sbjct: 1084 TESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYS---SLSYLKLLPIDTLKLDQSFVC 1140 Query: 595 --EGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 E P D ++ AA I LA SL L+++AEG+ETE QR LA QG+LF+ PLP E Sbjct: 1141 EIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAE 1200 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 134/421 (31%), Positives = 235/421 (55%), Gaps = 9/421 (2%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLL 297 A P++ LPN+ L+ + L+ +A+ K L+++ + ++ L A + +L Sbjct: 492 AYHDPLTGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLGHAVGDRILT 551 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 TL ++++ L +A+ G +F V+ ++E ++L Q++ ++S+ + I+ ++ Sbjct: 552 TLAQRMQETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQPVLIDGEEMC 611 Query: 358 PHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 S+G+++ D + +QL A +A + A+ KG+N QF+ P A +RL E+++ Sbjct: 612 LTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGRNNFQFYTPDMNAHAGRRLQLENNL 671 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 AL+ + ++ QPQVEM SG+++ +E LLR P+ P+ I E G++ +G Sbjct: 672 RKALQRQEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIG 731 Query: 477 HWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 W LE++C+ AWQ+ L ++VNLSA Q + N+V D+ ++L + + L +E+T Sbjct: 732 AWALEQACQQTVAWQKNHPELKIAVNLSARQFRNENLVDDIEQILNKTGLAARHLEMELT 791 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 ES ++D A+ ++ L G+ +A+DDFG GY+ L H+ PID LKID+ FV Sbjct: 792 ESLLMEDVDVAIDLMNRLTKLGITLAIDDFGTGYSS---LSHLNRFPIDKLKIDRSFVNS 848 Query: 597 LPGDSSMIA-AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 + D++ IA II L ++L L +IAEGVE QR L + G AQG+ F+RP+ F Sbjct: 849 MSLDNNGIARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFSRPVHDNAFS 908 Query: 656 E 656 E Sbjct: 909 E 909 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 144/463 (31%), Positives = 252/463 (54%), Gaps = 16/463 (3%) Query: 201 LVGHQLALPRLHQD-DEIGMLVRSYNLNQQLLQRHYEEQNE-NAMRFPVSDLPNKALLME 258 L +++AL +H + EI + +N ++ YE E A ++ LPN+ LL + Sbjct: 423 LFWNEVALAAVHNEHGEIAHFISVFN--DVTDRKRYEAALEYQANHDDLTGLPNRNLLRD 480 Query: 259 MLEQVVA---RKQTT-ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILA 314 LE + R+ T A++++ + + L + L+ + ++ + +A Sbjct: 481 RLEHAITKATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVA 540 Query: 315 QISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TA 373 ++ G +F +++ +++ A TL Q++L +++ I ++ SIG+AMF D Sbjct: 541 RLGGDEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNG 600 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 ++L+ A +A + A+ G+N QF+ + ++RL E + NA+ HQ ++W QP++ Sbjct: 601 DELFRNADTAMYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKL 660 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 493 ++ SG + SAE L+R + P P I E GL++ +G WV+EE+ R LA W+++ Sbjct: 661 DLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQ 720 Query: 494 -GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILR 552 + +++N+SA QL H + +++ L + P +L +EVTE+ + AV L+ Sbjct: 721 ENQDIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQ 780 Query: 553 PLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIM 609 LR G+RVALDDFG GY+ L ++K PID+LKID+ FV + D +++ II Sbjct: 781 SLREMGIRVALDDFGTGYS---SLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIIN 837 Query: 610 LAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 LA +LN+ ++AEGVETEAQ ++L G QG+ F +PLP E Sbjct: 838 LAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSE 880 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 146/452 (32%), Positives = 247/452 (54%), Gaps = 22/452 (4%) Query: 222 RSY-NLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMI 274 +SY ++ + QR E N A+ P+++LPN+ LL++ L +A T AL+ Sbjct: 800 QSYISIRTDITQRKAAEDKSNYLALYDPLTNLPNRRLLLDRLTHALASAMRTGRGGALLF 859 Query: 275 ITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE---- 330 + + + L ++LL + E L + + +A++ G +F VI G+ E Sbjct: 860 LDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVARLGGDEFVVILEGLSEQEVE 919 Query: 331 -PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTAR 388 A +G+++L E + + S+G+ +F +L +++L +A A + A+ Sbjct: 920 AAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKNNLKSDELLKQADIAMYQAK 979 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 G+N + FFDP+ E Q R+ E ++ AL+ ++F ++ Q QV + S + V AE L+R Sbjct: 980 KLGRNALSFFDPKMQEGIQARVDMEHELRKALDKNEFQLFYQMQVGL-SDRAVGAEALIR 1038 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ--ERGIMLPLSVNLSAL 506 P+ P+ + E CG+++++G WV++ +C L W+ ER L LSVN+SA Sbjct: 1039 WIHPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLKRWEQSERTRSLTLSVNVSAK 1098 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q + V + + R+ I P L LE+TES +D AVAI+ L++ G+R +LDDF Sbjct: 1099 QFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHIEDAVAIMNALKDIGIRFSLDDF 1158 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ LQ+++ LP+ LKID+ FV + G+ +++ II +A +LNL +IAEGV Sbjct: 1159 GTGYSS---LQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGV 1215 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 ET+ Q+ L +G QG+LF+ P+PI+ FE Sbjct: 1216 ETQVQQGILLDSGCMHYQGYLFSEPVPIDAFE 1247 >UniRef50_C9YG65 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YG65_9BURK Length = 823 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 143/419 (34%), Positives = 216/419 (51%), Gaps = 15/419 (3%) Query: 251 PNKALLMEMLEQ---VVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 PN+ E + V+ Q+ +LM++ E + + ++LL E+L + + Sbjct: 395 PNRNYFAEYVGNCLMVMGSDQSGSLMLVDIEGFKKINDSMGHDTGDLLLKYAYERLVATV 454 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 P ++A+ +FAV G + A + Q+VL SE + + SIG+++F Sbjct: 455 GPANMVARFGNDEFAVCLGGCKNQAEAAEIAQKVLNAFSESFNVLGHVVWAGASIGISVF 514 Query: 368 YGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D T L RA A + A+ GK++ F+ + Q R T E D+ AL ++ Sbjct: 515 PTDGSTPNDLLRRAEMAMYKAKSLGKDEFSFYSAELDVDTQGRRTLEVDLRRALAQNELE 574 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QP V M S + E LLR + P PD I E GL+V +G WVLEESCR Sbjct: 575 LFYQPIVTMGSAAVSHVEALLRWRDPQKGLISPDTFIPLAEETGLIVEMGVWVLEESCRQ 634 Query: 487 LAAWQERGI--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 LAAW + G+ + +++N+S Q+ +A + E L+RY + + E+TES +D Sbjct: 635 LAAWHKAGLDAHVGVAINVSGRQVPRGLSLACITETLSRYGLDGSQVSFEITESVLLDGS 694 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG----- 599 L +RN G+R+ +DDFG GY+ L L+H+++ LKIDK FV G+ G Sbjct: 695 GTVAEWLSGVRNLGIRLMIDDFGTGYSSLSYLKHLQAA---ALKIDKSFVWGVAGESENK 751 Query: 600 -DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 D S++ AII +A SL L +IAEGVET Q DWL + AQG+L+ RPLP E F S Sbjct: 752 EDQSLVLAIISMAHSLGLPVIAEGVETNEQADWLLRNQCDFAQGYLYGRPLPAENFRSS 810 >UniRef50_Q1K008 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K008_DESAC Length = 995 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 130/419 (31%), Positives = 232/419 (55%), Gaps = 13/419 (3%) Query: 246 PVSDLPNKALLMEMLEQVVARKQTTALMIITCETL-----RDTAGVLKEAQREILLLTLV 300 P++ N+ L + L+Q + R Q+ M + +L + L + +L+ + Sbjct: 561 PLTGSANRVLFRDRLQQAIKRAQSRKGMEVQVFSLDLDYFKRINDSLGHVAGDRMLIEVA 620 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 +LK V + ++++SG +FA++ + + A + Q++L +SE + I+ +L Sbjct: 621 ARLKRVSRGQDTISRLSGDEFAILVTCLNDEVDATRMAQKMLQAISEPMMIDGAELIITA 680 Query: 361 SIGVAMFYGDLTAE-QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 SIGVA++ GD + L + A +A A+ +G++++ +F + + AQ+ LT ES + A Sbjct: 681 SIGVALYPGDGDDDVTLMANADNAMHQAKRQGRSRMCYFSAELADKAQEYLTIESKLRRA 740 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 LEN + ++ QPQV++ +G +V+AE LLR + W PD +I E GL++ +G W+ Sbjct: 741 LENSELQLYYQPQVDLATGDIVAAEALLRWHSDELGWVSPDRMIPVAEEGGLIIALGRWI 800 Query: 480 LEESCRLLAAW-QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 +EE CR + + + G P++VN+SA Q + P +++E++ Y I P L LE+TES Sbjct: 801 IEECCRTIRGYHRSSGNWFPIAVNVSARQFLEPGFTDELVEIVRFYDIPPSLLELELTES 860 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP 598 +DD A+ ++ L G ++ALDDFG GY L ++K P+ LK+D+ FV + Sbjct: 861 MMLDDVGKAIETMKALSFKGFKIALDDFGTGYTS---LAYLKQFPVSKLKLDRAFVTDVH 917 Query: 599 ---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 D+++ A++ + + L ++AEG+E Q + L G QG+LF+RPLP + F Sbjct: 918 RDVNDAAIAEALVTFTRVMGLSLVAEGIEESVQHECLNLMGFRFGQGYLFSRPLPKDQF 976 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 130/416 (31%), Positives = 222/416 (53%), Gaps = 13/416 (3%) Query: 246 PVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN+ L E +++ + R Q A++ ++ +D L + LL E Sbjct: 521 PLTALPNRLLFTEKVDEAIKRYQEKNGILAILFCDLDSFKDVNDSLGHPVGDELLQQAAE 580 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 ++++++ +LA++ G +F V+ G + Q ++ + I+ ++ S Sbjct: 581 RIQNIICNDGVLARLGGDEFTVLLEGRANIREIENVAQHIIRAFRQSFFIDGYEIFSTIS 640 Query: 362 IGVAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 IG+++ +GD L A A F A+ GKNQ++F+ +Q +R + +D+ A Sbjct: 641 IGISLHPDHGD-NVTSLIQHADVAMFDAKESGKNQLRFYHDEQGSQRYERFSLVNDLRRA 699 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 LE +F I+ QPQ++ +G ++ E LLR Q + P I E GL+V +G WV Sbjct: 700 LEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAEEQGLIVPIGEWV 759 Query: 480 LEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 L ESCR+ W ++G+ + VN++ Q+MH +++ + L I+P L LEVTE+ Sbjct: 760 LRESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIRPHLLDLEVTENF 819 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG 599 + P + L R G+ +++DDFG G++ L ++K LPI+ LKID+ FV + Sbjct: 820 LLKQPEITIPKLHKFREMGLSLSMDDFGTGFS---SLSYLKKLPINTLKIDQSFVRDIGS 876 Query: 600 D---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 D +++ AII+LA+SL L+ +AEGVET Q +L G + QG+ F+RPLP E Sbjct: 877 DPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSRPLPAE 932 >UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN4_CHRVO Length = 679 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 150/436 (34%), Positives = 239/436 (54%), Gaps = 14/436 (3%) Query: 232 QRHYEEQNEN-AMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGV 286 +R EE+ ++ A P++ LPN+ L + L + ++ A++ I + +D Sbjct: 235 RRRAEERLDHLAHHDPLTGLPNRLLFQKRLSRALSVPDLPPYKLAMLFIDLDRFKDVNDT 294 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL + +L + +LA++ G +F + ++ A + ++L + Sbjct: 295 LGHYIGDQLLNAVAARLADSIRAEDMLARLGGDEFICVLESIENRDMAADVAGKLLALFR 354 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDLTAE--QLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + I L SIG++ F G+ A+ L A A ++A++ G+N+ Q + PQ E Sbjct: 355 QPFCINGNDLYLSASIGIS-FAGNDGADVDTLLRHADIAMYSAKNAGRNRCQHYSPQMSE 413 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 A++R+ E + AL+N + + QPQV+ +GKLV AE L R + P P I Sbjct: 414 DAEQRVVLERQLRQALDNDEITVHYQPQVDAVTGKLVGAEALARWRHPILGMVPPARFIP 473 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTR 523 E CGL+V +G +LE+S R LA+W E G LP +SVNLSA QL + + LL R Sbjct: 474 VAEECGLIVALGEQILEKSLRQLASWHEAGFPLPSVSVNLSARQLERQDFPQHVARLLKR 533 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 YR++P L LE+TES I AV IL LR G+R+++DDFG GY+ L +++ LP Sbjct: 534 YRLEPRHLELEITES-VIMATEDAVNILAELRAQGIRLSIDDFGTGYS---SLSYLRQLP 589 Query: 584 IDVLKIDKMFVEGL-PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 + VLK+D+ F+ G+ G +++ AI+ L+ SL L+ +AEGVE +Q ++L AG I QG Sbjct: 590 VQVLKVDRSFILGIGKGGEAIVHAIMALSSSLGLETVAEGVEEASQLEFLRSAGCHIIQG 649 Query: 643 FLFARPLPIEIFEESY 658 FL+A PLP E F + + Sbjct: 650 FLYAAPLPAESFADGW 665 >UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVS2_RUBXD Length = 762 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 139/433 (32%), Positives = 235/433 (54%), Gaps = 13/433 (3%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ-----TTALMIITCETLRDTAGV 286 +R E + A+ P++ L N+AL + L +R A++++ + + Sbjct: 318 ERLQERLEQQALHDPLTGLANRALFSDRLAHAASRANPLDCGRLAVLMLDLDGFKSVNDS 377 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL+++ ++++ + P +A++ G +FAV+ + + A+ + +++L + Sbjct: 378 LGHEVGDALLVSVAGRIRACVRPSDTVARLGGDEFAVLIEEISDVGAAVRVAERILDRLG 437 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 E + + S+GVA F A+ L A +A + A+ +GK + + F+P+ A Sbjct: 438 EPYSVGGVGRVAAASVGVA-FGPAREAKSLLRDADAAMYVAKERGKGRYEVFEPRMRNAR 496 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 ++L E+++ ALE +FA+ QP V +G++V E L+R ++P P + Sbjct: 497 AEKLRLEAELRAALERGEFAVHYQPIVSFATGEVVEVEALVRWERPGRGTVGPAEFLSVA 556 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+V +G WVL E+CR + WQ+ G L L+VNLSA QL HP +V ++ E L Sbjct: 557 EESGLIVPIGRWVLREACRQVREWQKGGSRELALAVNLSASQLHHPRLVREVEEALGLSG 616 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 ++ L LE+TE ++D A L L GVR+ALDDFG GY+ L ++++ P+D Sbjct: 617 LEARHLKLEITEQAAVEDAREAARRLEELSALGVRIALDDFGSGYS---ALSYLRTFPVD 673 Query: 586 VLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ F+EG+ D +S++ A+I LA+SLN+ + AEG ETE Q L G +AQG Sbjct: 674 TLKIDRSFIEGIGRDLQATSIVGAVIALAKSLNMCVTAEGTETEEQLAHLRSLGCDLAQG 733 Query: 643 FLFARPLPIEIFE 655 + F+RP E E Sbjct: 734 YYFSRPASPEEVE 746 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 129/453 (28%), Positives = 253/453 (55%), Gaps = 16/453 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEML--EQVVARK--Q 268 DE G + + + + + R E+ + + + ++DLPN+ + ++ L E + A++ Sbjct: 254 DEEGNVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQS 313 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 + A++ + + +D ++LL+ ++L++ L P ++A++ G +F ++ N + Sbjct: 314 SLAVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQL 373 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF--YGDLTAEQLYSRAISAAFT 386 + A L +Q++ + ++ CSIG+A++ GD E L RA +A +T Sbjct: 374 LDRNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGD-NPEDLLKRADTALYT 432 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 + +GKN FFDP + +R+ E+++ A+E QF I+ QP++++ + + E L Sbjct: 433 VKSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEAL 492 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSAL 506 +R P+ P+ I E G+++ +G W+L+++C+ W ++G L +SVNLSA Sbjct: 493 VRWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSAR 552 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q+ ++V + ++L ++ P L LE+TES + A A+L+ +R+ G+++++DDF Sbjct: 553 QIYQKDLVEMIKDILQETKLSPHWLELEITESIFV-KMEEATAVLQQIRDIGIQISIDDF 611 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ ++KSLP+D +KID F+ + + +++ AI+ +AQSLN+ +IAEG+ Sbjct: 612 GTGYSS---FSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGI 668 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 E Q L + G QG+LF++PLP + F++ Sbjct: 669 ELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQ 701 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 147/444 (33%), Positives = 242/444 (54%), Gaps = 13/444 (2%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAM--RFPVSDLPNKALLMEMLEQVVAR----KQ 268 DE G + L + +R +E + M ++DLPN+AL+ + L Q + K Sbjct: 596 DEAGQVSHHVALFSDISERKEQEAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAARQKN 655 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++ + + ++ L A + LL + ++L+ + + + G +F +I + Sbjct: 656 RLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPEL 715 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTA 387 P A L Q++L + I+ L SIG+++F + + ++L A A + A Sbjct: 716 ASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSELQELLVSADLAMYHA 775 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + +G+N+ QFF P+ +RLT E+ + ALE Q + QPQ + + +LV E LL Sbjct: 776 KAQGRNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALL 835 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQ 507 R Q P+ P I E GL+V +G WVL+E+CR AAW G L ++VN+SA Q Sbjct: 836 RWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQ 895 Query: 508 LMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFG 567 L P+++A++ L R+R+ L LEVTES ++D AV L+ + G+ +A+DDFG Sbjct: 896 LGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFG 955 Query: 568 MGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVE 624 GY+ L ++K D++KID+ FV LP D+++++AI+ LA++L +Q +AEGVE Sbjct: 956 TGYSS---LTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVE 1012 Query: 625 TEAQRDWLAKAGVGIAQGFLFARP 648 +E Q D+LA+AG + QG+L RP Sbjct: 1013 SEEQLDFLAQAGCDVVQGYLTGRP 1036 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 145/460 (31%), Positives = 243/460 (52%), Gaps = 25/460 (5%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVARKQTT-- 270 D G + + Q + + E+ N + F P++ LPN+ LL++ L+ +A + Sbjct: 352 DHNGQIAGGIAIVQDITEHKAAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGR 411 Query: 271 --ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI---- 324 AL+ I + + L ++LL + ++L S + +A++ G +F V+ Sbjct: 412 EGALLFIDLDNFKALNDTLGHDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDL 471 Query: 325 -ANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC--SIGVAMFYG-DLTAEQLYSRA 380 + ++ +G+++L ++ LP + + C SIG +F G +L E+L RA Sbjct: 472 GGHDLEAAAQTEAVGEKILAMLG--LPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRA 529 Query: 381 ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKL 440 A + A+ G+N ++FFD Q +A R+ E ++ AL+ QF + Q QV+ SG+ Sbjct: 530 DIAMYQAKQAGRNTVRFFDQQMQDAVTARVALEGELHKALDRQQFRLHYQIQVD-ASGRP 588 Query: 441 VSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LP 498 + AE L+R P+ PD I E L++ +G WV++ +C L WQ+ L Sbjct: 589 LGAEALIRWMHPERGLVPPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLV 648 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 L+VN+SA Q + V + + R+ I P L LE+TES +++ + + L+ G Sbjct: 649 LAVNVSATQFHQLDFVFQVRATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIG 708 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLN 615 V+ +LDDFG GY+ L Q++K LP+D +KID+ FV + DS+ ++ II +AQ+L Sbjct: 709 VQFSLDDFGTGYSSL---QYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLY 765 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 L +IAEGVETE QR +L G QG+LF +P+P+E FE Sbjct: 766 LDVIAEGVETEEQRQFLQDNGCTHFQGYLFGKPVPVEQFE 805 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 157/452 (34%), Positives = 242/452 (53%), Gaps = 27/452 (5%) Query: 224 YNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQ---VVARKQT-TALMIITC 277 + +N + QR E A+ ++ LPN+ LL++ L V AR Q AL+ I Sbjct: 599 FAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLFIDL 658 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + L ++LL + +L S + +A++ G +F VI G H L Sbjct: 659 DNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMGDFGEDHDEAL 718 Query: 338 GQQVLTIMSERLP---IERIQLRPHC-----SIGVAMFYG-DLTAEQLYSRAISAAFTAR 388 Q ++ + ER+ I+ L P+ SIG+A+F T +L RA A + A+ Sbjct: 719 TQ--ISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQAK 776 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 G+N ++FFDP A R ES++ + E ++F + Q QV+ S ++ AE L+R Sbjct: 777 ASGRNAMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVD--SRGIIGAEALVR 834 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPLSVNLSAL 506 Q P P I + E GL++ +G WVLE +C LA+W Q + L LSVN+S+L Sbjct: 835 WQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSL 894 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q P+ V ++ +L R P L LE+TES + D +A + L+ GV ALDDF Sbjct: 895 QFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDF 954 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G+GY+ L ++K LP+D +KID+ FV + D++++ I++LA+S+ L +IAEGV Sbjct: 955 GIGYS---SLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGV 1011 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 ET AQ+D+LA G QG+LF+RPLP+E FE Sbjct: 1012 ETGAQKDFLASHGCTAYQGYLFSRPLPLEQFE 1043 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 134/433 (30%), Positives = 236/433 (54%), Gaps = 20/433 (4%) Query: 227 NQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV--ARKQTTALMI--ITCETLRD 282 N++L HY ++ R LPN+ LL + ++Q + AR A + + + + Sbjct: 257 NEKL---HYLALHDGLTR-----LPNRTLLEDRVDQAIRHARGVDGAFSVFFLDVDRFKP 308 Query: 283 TAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVL 342 L + + +L + +L + P +A+I G +F ++ ++P + +++ Sbjct: 309 INDSLGHSTGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQKDPGKVHEIARKIR 368 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQ 401 ++E + ++ L SIG+++F D T L + A SA + A+ KG QIQF+ + Sbjct: 369 DCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYAKSKGSGQIQFYSGE 428 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 ++A R+ E+D+ +E +F ++ QP+V + +G++ S E L+R P+ P Sbjct: 429 LNDSAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHY 488 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLEL 520 I R E GL++ +G W+++ +CR WQ+ G L ++VNLSALQ ++ +++ ++L+ Sbjct: 489 FIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEILDA 548 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L + P L LE+TES ++DP A+ L +R GV VA+DDFG GY+ ++K Sbjct: 549 LESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYS---SFSYLK 605 Query: 581 SLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 P+D LKID+ F+ + P D++++ II L +LNL++IAEGVE++AQ + L Sbjct: 606 KFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMEC 665 Query: 638 GIAQGFLFARPLP 650 QGF +RPLP Sbjct: 666 DAYQGFFNSRPLP 678 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 160/471 (33%), Positives = 257/471 (54%), Gaps = 28/471 (5%) Query: 206 LALPRLHQDDEIGMLVRSYNLNQQL-LQRHYEEQNENAMRF-PVSDLPNKALLMEMLEQV 263 L++ + D G + S L + + LQR +E+ + F P++DLPN+ LL E ++ Sbjct: 518 LSVSSVRDGDANGPITHSITLFRDISLQREAQERIQRLAHFDPLTDLPNRVLLAERTQRQ 577 Query: 264 VARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 +A++Q AL+ + + ++ L +ILL+ + +L+S++ P+ ++++ G Sbjct: 578 IAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGPQDTVSRLGGD 637 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYS 378 +F ++ HA + +LT +++ I+ +L S+G+AM D + + LY Sbjct: 638 EFLLLLPATSAA-HAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQ 696 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 RA +A ++A+ G+N+ FF + L E+ + ALE QF + QPQV + +G Sbjct: 697 RADAAMYSAKQSGRNRYGFFTADLQARTARALQIENALRRALERQQFELHYQPQVSLGTG 756 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP 498 ++V AE LLR P+ P I E G +V +G WVL + R W + + LP Sbjct: 757 QVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLD--MQLP 814 Query: 499 L---SVNLSALQLMHPNMVADMLELLTRYRIQPG----TLILEVTESRRIDDPHAAVAIL 551 L SVNLSA+Q HP + E++TR Q G L LE+TE +DDP AA+A++ Sbjct: 815 LRAVSVNLSAVQFRHPQLP----EMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMM 870 Query: 552 RPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAII 608 L + GVR+++DDFG GY+ L L K I LKID+ FV L D+ ++++AII Sbjct: 871 DQLHDRGVRLSMDDFGTGYSSLSCL---KRFQIYKLKIDQSFVRDLDDDANDRAIVSAII 927 Query: 609 MLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 +AQ+L +Q AEGVET+ Q +L G QG+LF+RPLP + F E+YL Sbjct: 928 RMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAF-EAYL 977 >UniRef50_C4KCC9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4KCC9_THASP Length = 748 Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 141/437 (32%), Positives = 226/437 (51%), Gaps = 13/437 (2%) Query: 224 YNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITC 277 Y + + + +R E+ + A ++ LPN+ L + LE +A+ Q A+M I Sbjct: 287 YGVARDISERKRAEEIISFQAYHDQLTHLPNRVLFKDRLELAIAQAQRRTGALAVMFIDI 346 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + A+ ++LL + +L + L LA++ G +F V+ + +P A + Sbjct: 347 DRFKLVNDTFGHAEGDLLLRAIASRLSATLRRGDTLARLGGDEFTVLLPDINQPEDAEVI 406 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQ 396 ++VL ++ + + + + R S+G+A+F D TAE L A +A + + GKN + Sbjct: 407 ARKVLDALATPVRLSQGEFRATVSVGIALFPRDGTTAEDLTRHADAAMYQVKRSGKNAFR 466 Query: 397 FFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSW 456 FFDP+ + R+ E+D+ A+ + + QPQV + + +V E LLR P Sbjct: 467 FFDPELNTRHRDRIALENDLRGAVARGELDLHYQPQVSLATRGIVGLEALLRWNHPGLGA 526 Query: 457 DLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVA 515 P I E GL+ + +WVLE +C LA WQ G+ P +S+NLSA ++V Sbjct: 527 IPPATFIQVAEEVGLISEISNWVLETACAQLARWQAEGVGAPRVSINLSACDFQRGDVVG 586 Query: 516 DMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQ 575 + L R+ + P L +E+TE +DD A +R LR AG+ VA+DDFG GY+ L Sbjct: 587 RIRACLDRHGVAPSCLEVEITEGLMMDDTADIAAKVRALREAGISVAIDDFGTGYSALAY 646 Query: 576 LQHMKSLPIDVLKIDKMFVEGLPG--DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLA 633 LQ P+ LKID+ FV L G + +I+AI +A+ +L ++AEGVE Q D L Sbjct: 647 LQR---FPVSTLKIDRSFVRDLEGPMTNPIISAITGIARGFDLDLVAEGVENLEQADALR 703 Query: 634 KAGVGIAQGFLFARPLP 650 G + QG+LFARP P Sbjct: 704 ALGCEVMQGYLFARPAP 720 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 140/458 (30%), Positives = 243/458 (53%), Gaps = 15/458 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVARKQTT-A 271 DE+G + ++ + R E + + P++ LPN+A + E L++++A++++ A Sbjct: 944 DEMGQIQSHIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQMHEALDRLMAKEESQLA 1003 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 L+ I + + + + +L + +LK + + ++++I G +F VI + E Sbjct: 1004 LLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLVSRIGGDEFTVIMATLPET 1063 Query: 332 WHAI----TLGQQVLTIMSERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFT 386 AI + +++L M + IE QL S+G+A++ L+ L A +A + Sbjct: 1064 EQAIQTIIDVSERILHQMMQPFFIEDRQLYLSASVGIALYPENALSGTDLLRNADTAMYH 1123 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ GKN QF+ + E A +RL E+++ AL+ +F + Q Q ++ + E L Sbjct: 1124 AKAMGKNNFQFYAEEMNEKAMERLELENNLHLALQRDEFELTFQAQWDIKHNCICGVETL 1183 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSA 505 LR +PD PD I IE GL+V +G WVL +C + WQE G ++P L+VNLSA Sbjct: 1184 LRWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIMDWQEAGYVIPKLAVNLSA 1243 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q M+ + ++ + P + LE+TES +DD +A+L R G +++DD Sbjct: 1244 RQFKDAQMLDRICRIVDETGVDPELIELELTESILMDDIDRTLAVLNEARKMGFGLSIDD 1303 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K P+ LKIDK F++ LP D + I+ +A +L L +IAEG Sbjct: 1304 FGTGYSS---LSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTIVAMANNLGLGVIAEG 1360 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 VE E+QR +L G QG++++ P+P ++F + +LE Sbjct: 1361 VENESQRQFLKTIGCYQVQGYMYSHPVPADLFAQDFLE 1398 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 129/443 (29%), Positives = 243/443 (54%), Gaps = 12/443 (2%) Query: 216 EIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----A 271 ++G + +Y Q+ LQ+ + + A P++DLPN+ L ++ L Q + + Q A Sbjct: 435 QLGHEITNYLDIQEQLQQQKNDLDFIAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVA 494 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 L+ I + ++ A +++L+ ++LK + +A++ G +F ++ + ++ Sbjct: 495 LLFIDLDRFKEINDSFGHASGDLVLIECGKRLKKAIREIDTVARLGGDEFTILIDELKTN 554 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHK 390 I + ++++ +S+ + + SIG+++F D T A QL A +A + A+ Sbjct: 555 NVIINVVKKIIKTLSDPIFVNENIFHITASIGISIFPNDGTDANQLLQNADAAMYQAKED 614 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 GKN F+ + E A RL E+++ +AL+N QF ++ QPQV++T+ K+V E L+R Sbjct: 615 GKNTYHFYTKEMTEQAYNRLLMENNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWN 674 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLM 509 PD I E GL++ +G ++ + + ++ W + + +++N+SA QL Sbjct: 675 HEQKGIIPPDHFIPLAEETGLIIPLGKQIIAMASQTISEWHQANLTNARIAINVSAKQLR 734 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 ++ L + QP + +E+TES + +P A+ +L LR G+ +++DDFG G Sbjct: 735 DSRFFHNLNTALNKNNCQPDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTG 794 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++K LPI +KID+ FV LP D+ + AII ++QSLNL +IAEG+ET+ Sbjct: 795 YSSLA---YLKKLPITKVKIDRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQ 851 Query: 627 AQRDWLAKAGVGIAQGFLFARPL 649 Q++++ + G + QG+ ++RPL Sbjct: 852 EQQNFVLQEGCKLIQGYYYSRPL 874 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 148/455 (32%), Positives = 240/455 (52%), Gaps = 22/455 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVV---ARKQTT-A 271 G + + + +R E+ + F ++ LPN+ LL++ L Q + AR + A Sbjct: 572 GTVSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGA 631 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI-----AN 326 L+ I + + L + ++LL + +L + +A++ G +F V+ N Sbjct: 632 LLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKN 691 Query: 327 GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAF 385 + +G+++L ++ + +I+ R SIG +F G + ++L +A A + Sbjct: 692 RQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMY 751 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 ++ +G+N ++FFDP +R E+ + NA+E++QF + Q QV T ++ AE Sbjct: 752 KSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGT--RVTGAEA 809 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNL 503 L+R Q P P I E GL+V +G WVLE +C LA W R M L ++VN+ Sbjct: 810 LVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNV 869 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S Q + V ++L ++ R +P L LE+TES +D+ + + L+ G+ AL Sbjct: 870 SVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFAL 929 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFG+GY+ L ++K LP+D LKID+ FV + D+ + I+ LA+SL L +IA Sbjct: 930 DDFGIGYS---SLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIA 986 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 EGVETEAQRD+LA AG QG+ F RPLPIE FE Sbjct: 987 EGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFE 1021 >UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBA9_AZOSB Length = 726 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 147/437 (33%), Positives = 224/437 (51%), Gaps = 13/437 (2%) Query: 224 YNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITC 277 Y + + + +R E+ + A ++ LPN+ L + LE +A+ Q A+M I Sbjct: 275 YGVARDISERKRAEEIISFQAYHDQLTRLPNRVLFKDRLELAIAQAQRRTGALAVMFIDV 334 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + A+ ++LL + +L L LA++ G +F V+ + P A + Sbjct: 335 DRFKLVNDTFGHAEGDMLLRGIAARLAGTLRRGDTLARLGGDEFTVLLPDINGPQDAEVI 394 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQ 396 +++L +S P+ R SIG+A+F D AE L A A + + GKN + Sbjct: 395 ARKILDSLSAPFPLSHGDFRATASIGIALFPRDGDGAEDLTRHADIAMYQVKRSGKNGFR 454 Query: 397 FFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSW 456 FFD ++R+ E+D+ ALE +F + QPQ+ +T ++V E LLR P+ Sbjct: 455 FFDIALNSHYRERIVLENDLRTALERREFELHYQPQISLTQHRVVGMEALLRWNHPNLGL 514 Query: 457 DLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVA 515 P I E GL+ + WVLEE+C LA W+E G L +S+NLS ++V Sbjct: 515 VSPATFIPVAEEMGLIGDISRWVLEEACGQLARWREAGHNDLRMSLNLSPHDFDSQDVVT 574 Query: 516 DMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQ 575 + E + R+R+ P L LE+TES + D A +R LR AG+ VA+DDFG GY+ L Sbjct: 575 MVTECVERHRLPPSQLELEITESMMMQDAAGVAAKVRGLREAGLSVAIDDFGTGYSALAY 634 Query: 576 LQHMKSLPIDVLKIDKMFVEGL--PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLA 633 LQ P+ LKID+ FV L P + +I+AI +A+ LQ+IAEGVE Q + L Sbjct: 635 LQ---KFPVSTLKIDRSFVRELEGPNTNPIISAITGIARGFGLQLIAEGVERSEQAETLR 691 Query: 634 KAGVGIAQGFLFARPLP 650 G + QGFL+ARP P Sbjct: 692 TLGCDVMQGFLYARPAP 708 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 141/419 (33%), Positives = 226/419 (53%), Gaps = 13/419 (3%) Query: 246 PVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P+++LPN+ L+ LE + R A++ + + + L ++LL L Sbjct: 642 PLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLAR 701 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQ-LRPHC 360 +L + LA++ G +F V+ +Q P A + + +L+++ + + Q L Sbjct: 702 RLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGA 761 Query: 361 SIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 SIG++++ D T L A A + A+ +G+N +F+ P + A++RL E+ + A Sbjct: 762 SIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTARERLGLEARLHRA 821 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 L + +F + Q Q++M G+L+ E L+R PD I E GL+V +G WV Sbjct: 822 LASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWV 881 Query: 480 LEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 L ++C +W+ RG+ L ++VNLS QL P++V + +L + L LE+TES Sbjct: 882 LRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELTES 941 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP 598 +D A+ LR L+ GVR+++DDFG GY+ L ++K LPID LKID+ FV +P Sbjct: 942 MIMDQREQALERLRALKALGVRLSIDDFGTGYS---SLAYLKRLPIDELKIDRDFVRDIP 998 Query: 599 GDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 DSS + A II +A++L L +IAEGVET Q D+L + G QG+LF RPLP E F Sbjct: 999 EDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAEAF 1057 >UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=cellular organisms RepID=A4XXL0_PSEMY Length = 711 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 185/660 (28%), Positives = 325/660 (49%), Gaps = 41/660 (6%) Query: 17 AVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASI 76 + ++V V + C ++F + R A + I R+P + A+ D ++ + Sbjct: 44 SALVVGVVLSCAQIVFD-AYKTRQAVANDAQRILGMFRDPSTQAVYSLDREMGMQVIEGL 102 Query: 77 KPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLE---RPANP 133 V A + PN+ KS R + + TR P+ +S + R Sbjct: 103 FQHESVRYAAIGHPNEPMLAEKS----RELVQIATRWLTDPILGQEQQFSTKLVGRGPYS 158 Query: 134 QPIAYLVLQADSFRMYK-FVMSTLSTLVTIYL---LLSLILTVAISWCINRLILHPLRNI 189 + L + D+ + FV +++ V+ L ++L+L + W L+ PL I Sbjct: 159 EYYGDLNITLDTAPYGESFVTNSVIIFVSGVLRAMAMALVLYLVYHW----LLTKPLSKI 214 Query: 190 ARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENA-MRFP 246 L +I H+L + + ++ +E+G+ + + N ++R H + EN+ +R Sbjct: 215 IEHLTSINPDRPSEHKLPMLKGNEKNELGLWINTANQLLASIERNTHLRREAENSLLRMA 274 Query: 247 VSD----LPNK---ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKE---AQREILL 296 D LPN+ ++ + + R Q + + C L D G+ ++ + LL Sbjct: 275 QYDFLTGLPNRQQLQQQLDQILEDAGRLQRR--VAVLCVGLDDFKGINEQFSYQSGDQLL 332 Query: 297 LTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQL 356 L L ++L+S LA++ G FA++ +++P+ A L Q VL + ++ ++ Sbjct: 333 LALSDRLRSHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSVLDDLELPFLLDHQEV 392 Query: 357 RPHCSIGVAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 R +IG+ +F GD T E+L +A A+ + +N+ QF+ ++R E Sbjct: 393 RLRATIGITLFPEDGDST-EKLLQKAEQTMTLAKSRSRNRYQFYIASVDSEMRRRRELEK 451 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 D+ +AL +Q + QPQV+ ++V E LLR Q P + PD I E G ++ Sbjct: 452 DLRDALALNQLHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVAPDLFIPLAEQNGTIIP 511 Query: 475 VGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 +G W+L+++CR L W ++G L +++NLS +QL H + + L+ YR+ P +L L Sbjct: 512 IGEWILDQTCRQLREWHDQGFTDLRMAINLSTVQLHHAELPRVVNNLMQVYRLPPRSLEL 571 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 EVTE+ ++D A L LR +G +A+DDFG GY+ L ++KSLP+D +KIDK F Sbjct: 572 EVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSS---LSYLKSLPLDKIKIDKSF 628 Query: 594 VEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 V+ L D++++ AII L +SL +Q+IAEGVET Q ++ G QG+L+++PLP Sbjct: 629 VQDLLEDEDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAQGCHEGQGYLYSKPLP 688 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 134/427 (31%), Positives = 224/427 (52%), Gaps = 12/427 (2%) Query: 242 AMRFPVSDLPNKALLME----MLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLL 297 A +++LPN+ L + L Q K A+M + + + L + LL Sbjct: 516 AYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLK 575 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + ++ +L +A+I G +F ++ + + +A + +++ ++ I + Sbjct: 576 GIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFH 635 Query: 358 PHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG+A++ D T AE L A +A + A+ G+N QF+ P +R E+++ Sbjct: 636 ITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNL 695 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 AL+ +F I+ QPQVE+ +GK+V E L+R Q P P I E GL++ +G Sbjct: 696 RRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIG 755 Query: 477 HWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 W+L +C AWQ+RG + ++VNLSA Q + P++ + +L + P L LE+ Sbjct: 756 EWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEI 815 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES + D L LR G+ +A+DDFG GY+ L ++K LPID+LKID+ F+ Sbjct: 816 TESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSS---LNYLKRLPIDILKIDRSFIH 872 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 L D ++I+AII L +L ++++AEGVET+ Q +L + + QG+LF +PLP+ Sbjct: 873 DLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVR 932 Query: 653 IFEESYL 659 E+ YL Sbjct: 933 ELEQKYL 939 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 142/423 (33%), Positives = 225/423 (53%), Gaps = 19/423 (4%) Query: 248 SDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKL 303 + LPN+ LL++ L+Q +A ++ AL++I + + L + ++LL + ++L Sbjct: 745 TGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRL 804 Query: 304 KSVLSPRMILAQISGYDFAVIANGVQEPWHAI-----TLGQQVLTIMSERLPIERIQLRP 358 S + +A++ G +F V+ + E A TL +++L + + ++ + + Sbjct: 805 ASCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQS 864 Query: 359 HCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 SIG+ +F T E L RA A + A+ G+N ++FFDP+ R E+ + Sbjct: 865 TASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNTLRFFDPEMQAVVTSRAALEAGLR 924 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 A+ + +F ++ Q QV+ G L E LLR Q P+ P I E GL++ +G Sbjct: 925 RAVTSDEFLLYYQAQVD-GQGHLTGCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGR 983 Query: 478 WVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVL+ +C LA W R M L ++VN+S Q + V +L +L P L LE+ Sbjct: 984 WVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLEL 1043 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES I D +A + L+ GV +LDDFG GY+ L ++K LP+D LKID+ FV Sbjct: 1044 TESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYS---SLSYLKRLPLDQLKIDQGFVR 1100 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + P D+++ +I L SL L +IAEGVE EAQRD+LA+ G QG+LF RPLP++ Sbjct: 1101 NILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLD 1160 Query: 653 IFE 655 FE Sbjct: 1161 QFE 1163 >UniRef50_C6WW34 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW34_METML Length = 623 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 150/488 (30%), Positives = 271/488 (55%), Gaps = 27/488 (5%) Query: 188 NIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFP- 246 +IA E+N+ + L + + L R ++ + + + L Q + +R E + + Sbjct: 129 DIASEVNSGHSDTLKDYSVILIRKLEEKTLQLEEANQFLQQDIARRKEAEDKIQHLAYYD 188 Query: 247 -VSDLPNKALLMEMLEQVVA---RKQT-TALMIITCE---TLRDTAGVLKEAQREILLLT 298 +++LPN+ LL++ L+ +A R Q AL+ I + TL DT G + ++LL+ Sbjct: 189 LLTNLPNRLLLIDRLQHTLAMSARHQNHGALLFIDLDHFKTLNDTKG---HSVGDLLLVE 245 Query: 299 LVEKLKSVLSPRMILAQISGYDFAVI-----ANGVQEPWHAITLGQQVLTIMSERLPIER 353 + ++L++ + LA++ G +F VI + Q A T+ ++++ ++ ++ Sbjct: 246 VAKRLQTCMREGDTLARLGGDEFVVILQDLSEDSSQAAVQAETVCAKIISAINLPYYLDS 305 Query: 354 IQLRPHCSIGVAMFYG-DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTE 412 S+GV +F + T ++L RA A + A+ G+N +F+DP A + R Sbjct: 306 YLYHSSTSVGVCLFRNQEFTVDELLKRADIAMYQAKSAGRNTQRFYDPTMQAALEARAAL 365 Query: 413 ESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLM 472 ESD+ A++ +QF ++ Q QV+ SG + AE L+R Q P P I E GL+ Sbjct: 366 ESDLRLAIKKNQFRLYYQMQVDH-SGNVHGAEALIRWQHPQKGLVPPLQFIPLTEETGLI 424 Query: 473 VTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGT 530 + +GHWV+E +C + W+ + L ++VN+SA Q P+ V +E+L+R++I+PG Sbjct: 425 IPIGHWVMETACAQIKRWESDPLTRNLQVAVNVSACQFHDPSFVERAIEMLSRHKIKPGN 484 Query: 531 LILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKID 590 L LE+TES +D+ A+ ++ L++ GV ++DDFG G++ L ++ LP+D LKID Sbjct: 485 LKLELTESLVLDNVEEAIMKMQALKSYGVLFSMDDFGTGFSS---LSYLTKLPLDQLKID 541 Query: 591 KMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFAR 647 + F+ + D+ ++ II +A +L +++IAEGVE+E QR++L + + QG+LF++ Sbjct: 542 QSFIRNMCMNNRDAVVVQTIIGMANNLGIEVIAEGVESETQREFLEQNKCNLCQGYLFSQ 601 Query: 648 PLPIEIFE 655 PLPI+ FE Sbjct: 602 PLPIDAFE 609 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 152/455 (33%), Positives = 234/455 (51%), Gaps = 22/455 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVV---ARKQT-TA 271 G + + + +R E+ NA+ F ++ LPN+ LL++ L+Q + R + A Sbjct: 371 GRVSHYIGTHNDITERKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGA 430 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI-----AN 326 L+ I + + L + LL + +L + +A++ G +F V+ N Sbjct: 431 LLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTN 490 Query: 327 GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAF 385 + T+ +++L +++ + + SIG +F G L + L +A + + Sbjct: 491 DKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMY 550 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N ++FFDP A + R E D+L AL QF + Q Q M +L AEV Sbjct: 551 KAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQ--MVGERLTGAEV 608 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNL 503 LLR Q P P I E GL++ +GHWVLE +C LA W R L L+VN+ Sbjct: 609 LLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNV 668 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 SA Q + V +L +L + P L LE+TES +++ + + L++ GV +L Sbjct: 669 SAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSL 728 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++K LP+D LKID+ FV + D+S+ I+ LA SL L +IA Sbjct: 729 DDFGTGYS---SLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIA 785 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 EGVETEAQRD+LA +G QG+ F+RPLPIE FE Sbjct: 786 EGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFE 820 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 142/431 (32%), Positives = 228/431 (52%), Gaps = 11/431 (2%) Query: 235 YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREI 294 Y Q++ R P L N+ LL E + K A++ + + +D L + + Sbjct: 196 YLAQHDGLTRLPNRILGNE-LLTEAMRVAAEEKNLVAMLFVDLDNFKDVNDSLGHSAGDD 254 Query: 295 LLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERI 354 L+ + ++L+ + I+ + G +F + G+Q P + Q +L M + I Sbjct: 255 FLVQVAQRLRESVRQSDIVCRQGGDEFLIGLTGLQHPDAVAKVSQDILQKMQAPFQLRGI 314 Query: 355 QLRPHCSIGVAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTE 412 ++ CSIG+A++ +G+ + ++L A A + A+ G+N +FF + + L Sbjct: 315 EVLASCSIGIALYPQHGN-SFDELMRHADLAMYHAKEAGRNTFRFFSEDIRSSVTESLHL 373 Query: 413 ESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLM 472 S + A+ +F + QP ++ SG+L+ AE L+R Q P P I E GL+ Sbjct: 374 ISSLRQAVTQEEFVLHYQPVYDLHSGRLLGAEALVRWQNPKLGMVSPGLFITLAEKSGLI 433 Query: 473 VTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTL 531 V +G WVL E+CR + AW+++G L +SVNLS +Q N+ A + + L + P L Sbjct: 434 VDIGQWVLTEACRQMQAWRQQGATDLFVSVNLSPVQFSRGNVEAVIAQALRETGLDPRQL 493 Query: 532 ILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDK 591 LEVTES I D + L ++++G+R+++DDFG GY+ L LQ P+ LKID+ Sbjct: 494 ELEVTESTLIHDTEKFITTLGRIQHSGIRMSIDDFGTGYSNLSYLQR---FPVHKLKIDQ 550 Query: 592 MFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARP 648 FV L D +M++AII LA+SL L + AEGVE EA R+ L + G AQG+LFARP Sbjct: 551 SFVRRLMQGQKDVAMVSAIIHLAKSLQLTVTAEGVENEATREALTRMGCDQAQGYLFARP 610 Query: 649 LPIEIFEESYL 659 +P + FE +L Sbjct: 611 MPAKDFEAYWL 621 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/425 (31%), Positives = 227/425 (53%), Gaps = 12/425 (2%) Query: 240 ENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREIL 295 E A ++ LPN+ LL + +EQV+ ++ A++ I + + L ++L Sbjct: 450 EMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSLGHEIGDLL 509 Query: 296 LLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQ 355 L + ++LKS + +A+ G +F V+ N + E A + Q++L + I + + Sbjct: 510 LKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFALPFHIHKNE 569 Query: 356 LRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 L SIG+A+F D + AE L + A + A+ G+N QFF + ++A +R Sbjct: 570 LHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSAYERHILGL 629 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 D+ ALE ++ ++ QP ++M S L E LLR + P+ PD I+ E GL++ Sbjct: 630 DLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLAEETGLIIP 689 Query: 475 VGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 +G WV+ C + AWQE+G +P +++NLSA Q +++ ++ +L+ ++ + L Sbjct: 690 IGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSETGVKAKHIAL 749 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TES ID+ V L L G+ +++DDFG GY+ L ++K PI LKID+ F Sbjct: 750 EITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSS---LSYLKQFPIHTLKIDRSF 806 Query: 594 VEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 V L D +++AAII +A SL +++IAEG+E E Q D+L QG+ F++P+ Sbjct: 807 VRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYYFSKPVT 866 Query: 651 IEIFE 655 + E Sbjct: 867 VSEIE 871 >UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2U2_PELCD Length = 988 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 139/426 (32%), Positives = 228/426 (53%), Gaps = 15/426 (3%) Query: 247 VSDLPNKALLME----MLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 +++LPN+AL + LE+ V R ALM + + + L A+ ++LL + + Sbjct: 557 LTELPNRALFQKELDRRLEEAVGRGHGLALMFLDLDHFKGVNDSLGHAKGDLLLQKIAAR 616 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+ L LA+++G +F + + +P L V IM+ ++ ++ SI Sbjct: 617 LQGCLGREDFLARLNGDEFIFLLTEIDDPVAVKALAGNVQRIMASPFNLDGDEIYVGTSI 676 Query: 363 GVAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 G+A + +G + E L RA A + A+ +G+N I+ F Q +R E + NAL Sbjct: 677 GIACYPLHG-VDVENLMKRADRALYAAKERGRNAIELFSEQINARFHRRQQLEMRLQNAL 735 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 ++F + QPQV++ +G+++ E LLR + D +PD I E GL+ +G WVL Sbjct: 736 AKNEFFLEYQPQVDLQTGRMLGVEALLRWRNDDLGLVMPDDFISLAEETGLIRPIGEWVL 795 Query: 481 EESCR-LLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C+ L+ WQ G L L+VN+S Q+ HP+ V + ++L P L LE+TE+ Sbjct: 796 RTACQEYLSWWQPEGAELRLAVNISGQQIKHPDFVPIIDDILHSTGFDPRLLELEITETV 855 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG--- 596 ++D + R L+ +++A+DDFG GY+ L L+H PID LKID+ F+ Sbjct: 856 AMEDVEGNIGTFRDLKARRLQLAIDDFGTGYSSLSYLRH---FPIDRLKIDRKFIRDAAK 912 Query: 597 LPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 +S++ AI+ +A+SL+L +IAEGVETE Q +L K G QGF F RP+ ++ Sbjct: 913 CSDSASLVEAIMSMARSLHLDIIAEGVETEEQVAYLWKQGCRQIQGFFFGRPMSASDLQK 972 Query: 657 SYLEEK 662 YL+E+ Sbjct: 973 -YLQEQ 977 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 152/544 (27%), Positives = 275/544 (50%), Gaps = 25/544 (4%) Query: 136 IAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNA 195 + +V+ AD+ +++ + +T+ +++L+++I S + ++I PL ++ + Sbjct: 163 VGTVVIHADT-ELFRKNLRWTATVTLLFMLVTVIAAYFFSAKLQQMISRPLLDLLSSMKD 221 Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYN--------LNQQLLQRHYEEQNENAMRFPV 247 + A + ++A P DDEIG+L +N NQ L QR Q + A P+ Sbjct: 222 VSASKNYAIRVAKP---SDDEIGLLYDGFNEMLSEIEERNQILRQRQAHLQ-QLAHYDPL 277 Query: 248 SDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKL 303 + LPN+ L + L Q + + +Q +++ I + +D L ++LL+ + +L Sbjct: 278 TRLPNRTLFYDRLAQALNQAERNRQALSVIFIDLDHFKDINDTLGHRTGDLLLIDVANRL 337 Query: 304 KSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIG 363 +V+ +A++ G +F V V +A + ++ + ++ + ++ SIG Sbjct: 338 STVVRSCDTVARLGGDEFTVFTQNVMNADNAAIVAAKLNALFAKPFQLGESEIYVTASIG 397 Query: 364 VAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALEN 422 V +F D T ++L A A + A+ GKN + FD + E A +R+T SD+ ALE Sbjct: 398 VTLFPNDGKTVDELLMNADIAMYHAKACGKNVYKMFDRKMNEHANERVTLLSDLRLALER 457 Query: 423 HQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEE 482 +F + QP+V++ +G + S E L+R P PD I E G +V + WVL Sbjct: 458 EEFVLHYQPKVDLLTGNVTSVEALVRWMHPRLGMLAPDKFIRLSEESGFIVELTDWVLRT 517 Query: 483 SCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 +C WQE+ + + ++VNLS ++ + +L ++P L +E+TES + Sbjct: 518 ACTQAKKWQEQNLGSVRVAVNLSPYHFQRQDVKEAIFSVLDATGLEPALLEIEITESALM 577 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---P 598 + A+ R LR G+ +++DDFG GY+ L ++ PI+ LKID+ F+ + Sbjct: 578 QNDEYTCALFRELRELGMTISVDDFGTGYSS---LSYLHRFPINTLKIDRTFILNMMKSS 634 Query: 599 GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 D +++ AII +A+SLN+Q++AEGVET Q + L G QGFL +RP+ E + + Sbjct: 635 EDQAIVTAIIAMAKSLNMQIVAEGVETVDQLEKLKDQGCHEIQGFLVSRPVAAESVTQFF 694 Query: 659 LEEK 662 E Sbjct: 695 TPEN 698 >UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43017 Length = 573 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 142/440 (32%), Positives = 242/440 (55%), Gaps = 20/440 (4%) Query: 237 EQNENAMRF----PVSDLPNKALLMEMLE----QVVARKQTTALMIITCETLRDTAGVLK 288 EQ + R P+++LPN+ M LE + K+ A++ I + + L Sbjct: 137 EQQDEVYRLANEDPLTNLPNRRCFMNYLENKLLHAASSKEKLAVLFIDLDRFKYVNDTLG 196 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 + +L + E+L++ L + ++A++ G +F V+ V+E ++L + +LTI+ E Sbjct: 197 HLFGDRVLKHIAERLQAHLPEKSMIARLGGDEFVVVMTDVKEKEEPVSLTEDLLTIIREP 256 Query: 349 LPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 L ++ + S+G+A+ + AE L + A +A + A+ KG ++++ ++ + Sbjct: 257 LIMDGFEFTLTGSVGIALSPENGIDAEALLTSADAAMYRAKAKGSDRLEVYNRDVYQEFS 316 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 + E+D+ A++ +FA++ QPQ + SG + EVL+R + P P I E Sbjct: 317 RYFHVENDLRKAIDRGEFALYYQPQFCLESGDVCGEEVLVRWKHPIEGTISPGEFISIAE 376 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL++ +G W+L E+CR A W G +P+SVNLS Q + N+V + ++L ++ Sbjct: 377 ETGLIIPIGEWILREACRQKAKWINEGYPKVPMSVNLSLKQFLQHNIVHTIEKILKETKL 436 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 P L LE+TES + D + IL L GVR++LDDFG GY+ LQ++ LP+ Sbjct: 437 PPEYLDLEITESVTV-DLDRTLDILNQLIKVGVRISLDDFGTGYS---SLQYVGQLPVHE 492 Query: 587 LKIDKMFV----EGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV +G G+ ++I+ II L +SL L++IAEGVET+ Q D+L K G + QG Sbjct: 493 LKIDQSFVKKIGKGKEGE-AIISMIIHLGRSLELKVIAEGVETKEQLDFLQKQGCDLVQG 551 Query: 643 FLFARPLPIEIFEESYLEEK 662 + +A+PL E +E+ YL K Sbjct: 552 YYYAKPLSTEEYEQ-YLRYK 570 >UniRef50_Q2SDG6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDG6_HAHCH Length = 686 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 173/618 (27%), Positives = 291/618 (47%), Gaps = 29/618 (4%) Query: 53 VREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQ--FQALRKSFIPERPVPVMV 110 VR+P + A+ D A+ +L + + A + PNQ L K + E M Sbjct: 62 VRDPATQAVYSIDPDLAQQVLEGLFEKPSIRYAAISHPNQTTLAELSKPLL-ETQSRWMT 120 Query: 111 TRLFELPVQISLGVYSLERPANPQPIAY--LVLQADSFRMYKFVMSTLSTLVTIYLLLSL 168 +F + ++ ++ RP PQP Y L + D+ + LL +L Sbjct: 121 DAIFGKEREYAISLF---RP-TPQPTYYGELKIVVDTAPKSALFFERSILIFMTGLLRAL 176 Query: 169 ILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQ 228 +L + + L+ PL+ I L I E L +PR H+ DE+G VR+ N Sbjct: 177 LLAFVLHLVYHFLLTAPLKAIINSLLRINPAEPGLQSLPVPRQHEKDELGSWVRAANSLL 236 Query: 229 QLLQRHYEEQNENAMRF-------PVSDLPNKALLMEMLEQVV----ARKQTTALMIITC 277 Q ++ H +++ R ++ LP ++L + V A Q A+ + Sbjct: 237 QSIEEHQQKRQAAEARIIKLSQYDSLTGLPTRSLFTNYIAAAVDDSEALNQKFAVFCVGI 296 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + L +Q + LL E+L S + ++ G FA+I V + Sbjct: 297 DDFKSINEQLGYSQGDKLLQAFAERLLSQRDGVHTVCRLGGDQFALILFNVSSSYRVAAF 356 Query: 338 GQQVLTIMSERLPIERIQLRP-HCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQI 395 + +L +S IE QL P C+IG+A++ D AE++ +A A+ N Sbjct: 357 AESLLREISRPFEIEE-QLTPVSCTIGIAIYPDDARDAEKILQKAEQTMMLAKSVANNHF 415 Query: 396 QFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGS 455 QF+ ++R E D+ A++N + + QPQ+++ S ++V E LLR + P+ Sbjct: 416 QFYVASLDSEIRERKKLEKDLSKAIQNDELFLVYQPQIDLNSKQVVGCEALLRWRHPERG 475 Query: 456 WDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVA 515 PD I E ++ +G WVL E+C + W+ +G + +++NLSA QL Sbjct: 476 LVPPDVFIPIAEANETILEIGDWVLHEACAQVNQWRNQGFNIKVAINLSANQLRQKEFAP 535 Query: 516 DMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQ 575 +L+++ +I + LEVTE+ +++ + A+ LR L G++ A+DDFG GY+ Sbjct: 536 HVLKIIESRQIPTSLIELEVTETSFMENLNQAITSLRHLSEFGIQCAVDDFGTGYSS--- 592 Query: 576 LQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWL 632 L ++K LPI +KIDK FV L D+ ++ AII L +SL L +IAEGVET Q +L Sbjct: 593 LSYLKQLPIRKIKIDKQFVRDLMKDEDDTQIVHAIIQLGKSLRLDVIAEGVETPRQERFL 652 Query: 633 AKAGVGIAQGFLFARPLP 650 G +AQG+ +++P+P Sbjct: 653 KHDGCTLAQGYYYSKPVP 670 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 142/433 (32%), Positives = 235/433 (54%), Gaps = 13/433 (3%) Query: 233 RHYEEQNE-NAMRFPVSDLPNKALLMEMLEQVVARKQTTA----LMIITCETLRDTAGVL 287 + YE + E R ++ L N++LL + L Q ++ + + + + L Sbjct: 509 KRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTL 568 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 ++LL + E+L+ + ++++ G +F +I + + + Q+++ +++ Sbjct: 569 GHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQ 628 Query: 348 RLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 L IE + SIGVA++ D +T E+L A A + A+ G+N QF+ E A Sbjct: 629 PLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRNNFQFYTSSMNERA 688 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +RL E D+ NA+E +F + QPQ+++ +GK+V E L+R Q P+ P I Sbjct: 689 LERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLA 748 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+V +G WV+ E+CR WQE G+ L +SVNLSA Q +++ + L + Sbjct: 749 EETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEETQ 808 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + P L +E+TES + D A+ ILR L+ GV++++DDFG GY+ L ++K PID Sbjct: 809 LPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYS---SLSYLKRFPID 865 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 VLKID+ FV + P D++++A+II LA SL L +IAEGVETE Q +L + QG Sbjct: 866 VLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQG 925 Query: 643 FLFARPLPIEIFE 655 + F+RP+ + E Sbjct: 926 YFFSRPITADAME 938 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 148/451 (32%), Positives = 239/451 (52%), Gaps = 34/451 (7%) Query: 230 LLQRHYEEQNENAMRF-------PVSDLPNKALLMEMLEQVVARKQT----TALMIITCE 278 +L R E+ EN R P++ LPN+ LL + LE +A Q AL+ I + Sbjct: 412 MLSRDITERKENEARINNLAFFDPLTQLPNRRLLQDRLEHAIATGQRQAALGALLYIDLD 471 Query: 279 ---TLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI 335 TL D G ++LL+ + ++L+ L + ++ G +F VI G+ Sbjct: 472 DFKTLNDNRG---HHVGDLLLIAVADRLRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQA 528 Query: 336 TLG-----QQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA--EQLYSRAISAAFTAR 388 +++L +++ ++ + SIG+ +F GD A E L RA A + A+ Sbjct: 529 AQQVQQIAEKILQSLNQVYVLDEQEYFNSPSIGICLF-GDDDADIEDLLKRADQAMYHAK 587 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 G+N ++FFDP +A +R +++I AL +QF ++ QPQV+ T G++ AE L+R Sbjct: 588 AAGRNTLRFFDPHMQASAAQRFALQNEIREALLFNQFKLYYQPQVDRT-GRITGAEALIR 646 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSAL 506 P+ P I E GL++ +G+W+L+ +C+ L W++ + L LS+N+SA Sbjct: 647 WLHPERGMISPMDFIPIAEESGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSAR 706 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q P+ V +L +TR P L LE+TES + + + L++ G++ +LDDF Sbjct: 707 QFQQPDFVTQVLAAVTRTGANPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDDF 766 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K LPI+ LKIDK FV + P D+++ +I LAQS+ L +IAEGV Sbjct: 767 GTGYSS---LSYLKRLPINELKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGV 823 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 ET+ QRDWL + G QG+ F +P+ E F Sbjct: 824 ETQRQRDWLEQEGCLHYQGYYFGKPVGAEEF 854 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 143/422 (33%), Positives = 229/422 (54%), Gaps = 12/422 (2%) Query: 246 PVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN+ LL + L+ +A + A+M + + + L A + LL+ + Sbjct: 433 PLTGLPNRRLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAA 492 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +L++ L +A++ G +F V+ N + P A T+ ++++ + + +E +L S Sbjct: 493 RLRASLRDDDTVARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTS 552 Query: 362 IGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 +GVA++ D A+ L A A + A+ +G+N Q F+P + +RL E+ + AL Sbjct: 553 VGVAVYPDDSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETALHRAL 612 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 + ++ QP ++ G+LV+ E LLR + PD P I E GL+V +G WVL Sbjct: 613 PRDELQLYFQPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVL 672 Query: 481 EESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C W E G L + VN+SA Q A + +L + PG L LE+TES Sbjct: 673 RSACEHHRRWCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESM 732 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP- 598 +DD A+A L LR GV +A+DDFG GY+ L ++K PID LKID++FV G+ Sbjct: 733 LMDDTDRALARLDHLRALGVCLAIDDFGTGYS---SLAYLKRFPIDELKIDRLFVRGIDR 789 Query: 599 --GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D+++++AI+ L SL L+++AEGVET A D L + G +AQGF F+ PLP E F + Sbjct: 790 NTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVK 849 Query: 657 SY 658 +Y Sbjct: 850 AY 851 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 145/437 (33%), Positives = 230/437 (52%), Gaps = 11/437 (2%) Query: 226 LNQQLLQRHYEEQ-NENAMRFPVSDLPNKALLMEMLEQVVARKQT--TALMIITCETLRD 282 LN + H E++ A ++ LPN+ LL + + +AR + TA+M + + + Sbjct: 254 LNDVTARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGRLTAVMFLDLDRFKL 313 Query: 283 TAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVL 342 A + L+ + ++ + L +A++ G +F V+ + A L ++ Sbjct: 314 VNDSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDLASIEDAARLAAKLR 373 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +SE + I ++L SIGVA+ D E L A A + A+ +G+N F+ P+ Sbjct: 374 DRLSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPE 433 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 A++RLT ES++ AL + QPQV++ +G L AE L+R + P+ LP Sbjct: 434 MDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGE 493 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLEL 520 I E GL+V +G VL +CR W+E G L ++VNLS Q ++V + ++ Sbjct: 494 FIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDI 553 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L L LE+TES + D +VA L LR G+ +A+DDFG GY+ L ++K Sbjct: 554 LAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYS---SLSYLK 610 Query: 581 SLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 PID LKID+ F++G+P D++++ AII +A+SL L ++AEGVET AQR++L G Sbjct: 611 RFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGC 670 Query: 638 GIAQGFLFARPLPIEIF 654 QGFLF R +P E F Sbjct: 671 RSGQGFLFGRAMPAEDF 687 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 131/425 (30%), Positives = 234/425 (55%), Gaps = 12/425 (2%) Query: 247 VSDLPNKALLMEMLEQVV--ARKQT--TALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ALL E L + + AR+ ++ + + + L A + LL + E+ Sbjct: 399 LTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAER 458 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + + + G +F ++ +++ A + +++L +E I +L SI Sbjct: 459 LIVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSI 518 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++++ D + A+ + A +A + A+ G+N QFF + A +RL E ++ AL Sbjct: 519 GISIYPDDGMDADTVMKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALR 578 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +F ++ QP++++ SG ++ +E L+R Q P+ P + E GL+V +G WVL Sbjct: 579 QGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLR 638 Query: 482 ESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+CR + AWQE G++ +P+SVN+SA++ H + + + +L + P L LE+TES Sbjct: 639 EACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESIL 698 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL--- 597 + D ++ +L L+ G+++A+DDFG GY+ L ++K PI+ LKID+ FV + Sbjct: 699 MHDAESSATVLEALKTMGMQLAIDDFGTGYS---SLSYLKRFPINTLKIDQSFVHDIAID 755 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 P D+S++ A+I + ++L +++AEGVETE Q +L QGFLF RPLP + F Sbjct: 756 PDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARL 815 Query: 658 YLEEK 662 L ++ Sbjct: 816 LLNDR 820 >UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30P04_SULDN Length = 770 Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 128/414 (30%), Positives = 224/414 (54%), Gaps = 13/414 (3%) Query: 247 VSDLPNKALLMEMLEQV--VARK--QTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 +++LPNK LL++ LE VA K Q +++ + + ++ + LL + + Sbjct: 350 LTNLPNKTLLIDRLEHSINVASKNGQKVSILFLDLDRFKEINDTYNHEVGDKLLQDISRR 409 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 LK ++ + + G +F +I N E + + +++ MSE + +++L SI Sbjct: 410 LKKLIKEEDTIGRFGGDEFIIILNNSNET-QTVEVVTNIMSAMSEPFNVNKVKLHTTFSI 468 Query: 363 GVAMFYGDLTAEQLYSR-AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+++F D + + R A +A + A+ GKN+ QF+D + E A +R T ES++ A++ Sbjct: 469 GISIFPDDGNSRDILIRNADTAMYEAKSNGKNRYQFYDKKMTELAFERTTLESNLRKAIQ 528 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 N +F ++ QP+++ K++ E L+R P+ P I E GL++ + W++ Sbjct: 529 NEEFEVYFQPKIDARVDKVIGLEALIRWNHPELGLIPPVKFIPFAENIGLIIEIDRWMMR 588 Query: 482 ESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+ + W++ I+ LS+N+SA QL N V + + + I P L +E+TE Sbjct: 589 EAAAQVLLWKKENIVCGKLSINVSAKQLEDDNYVEFLSQKINDIGIDPKDLEIEITEGLI 648 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 + + L +R G+ +++DDFG GY+ L ++K LPID LKID+ FV+ LP D Sbjct: 649 MKHSLHVTSTLNAIRELGISISVDDFGTGYSS---LSYLKRLPIDKLKIDRSFVKDLPHD 705 Query: 601 SSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 IA II LA +L+L++IAEGVET+ QRD+L G QG+ +++PL + Sbjct: 706 KDDIAIVKTIIALANNLSLELIAEGVETKEQRDFLLSEGCHNIQGYFYSKPLKV 759 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 140/417 (33%), Positives = 220/417 (52%), Gaps = 11/417 (2%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN++ M ++ Q A++ + + + L + LL + ++ Sbjct: 668 LTGLPNRSAWMNQARSALSLAQRHQHILAVLFLDLDNFKTVNDSLGHPVGDRLLAAVAQR 727 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L L A++ G +F + V A + +++L ++ + I+ +L P SI Sbjct: 728 LAHCLREEDSFARLGGDEFVALLPRVTRAEDAAAVARKMLDALATPVVIDDHELAPSVSI 787 Query: 363 GVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+++F D T + L A +A + A+ G+N QFF P+ A +RL E+ + A+E Sbjct: 788 GISLFPSDGTDVDTLLKHADTAMYGAKEVGRNNFQFFVPEMNTRALERLLLENALRRAIE 847 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++ + QPQV TS + E L+R Q PD P I E GL+V +G WVL Sbjct: 848 RNELTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLR 907 Query: 482 ESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 E+CR W G+ L + VN+SALQ + V ++++L P + LE+TES + Sbjct: 908 EACRQQVKWARSGLHLMVGVNISALQFRRADFVDSVVQVLAETGANPERIELEITESALM 967 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG-- 599 D A LR L N G+ +ALDDFG GY+ L ++K LPI LKID+ FV+ LPG Sbjct: 968 DASDALSRRLRELANMGLSLALDDFGTGYS---SLAYLKRLPIGRLKIDRSFVKDLPGDP 1024 Query: 600 -DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D+++ AA + LA+ L L+++AEGVET AQRD+L G QG+L++RPL + FE Sbjct: 1025 EDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTLQGYLYSRPLDVAAFE 1081 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 141/433 (32%), Positives = 237/433 (54%), Gaps = 14/433 (3%) Query: 229 QLLQRHYEEQNENAM-RFPV-SDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRD 282 + +R EE+ N + + V + LPN+ LL + +EQ + Q A++ I + ++ Sbjct: 495 DITERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKN 554 Query: 283 TAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVL 342 L + LL + +LK+ L +A++ G +F + + + I + ++++ Sbjct: 555 INDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMI 614 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 ++E+ + QL SIG+ ++ D T+ +L A A + A+ G+N +F+ P Sbjct: 615 ESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYSPD 674 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 A +RL E+ + A+ Q +++ QP+V + SGK+ E LLR Q P+ + P Sbjct: 675 MNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAV 734 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLEL 520 I E GL+ +G WVL +SC WQ +G ++P++VNLSA QL N A ++ + Sbjct: 735 FIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTI 794 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L + L+LE+TES + + + IL LR+ GVR+ALDDFG GY+ L +L K Sbjct: 795 LREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRL---K 851 Query: 581 SLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 +LP+D LKID+ FV + P D+S+++A +LA +LNL++ AEGVET+ Q D++ Sbjct: 852 NLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNC 911 Query: 638 GIAQGFLFARPLP 650 QG+LF+RP+P Sbjct: 912 EEYQGYLFSRPIP 924 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 159/515 (30%), Positives = 274/515 (53%), Gaps = 20/515 (3%) Query: 148 MYKFVMS-TLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQL 206 ++ FV+S + S +TI +L+ + I + LH L I L + ++ + ++ Sbjct: 43 LFSFVISNSYSWEMTIRVLVIALFATLIGTVVTLYALHHLL-IPVNLTSATLRDYLNNK- 100 Query: 207 ALPRLHQD--DEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV 264 LP L + DE G L+ Q L + E + + ++ LPN+ LL E + Q + Sbjct: 101 TLPNLPTEFVDEAGTLMAD---TSQTLHKLDELIDYISNYDKLTGLPNRELLRERVNQAL 157 Query: 265 ARKQT---TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDF 321 +++ + A+M++ + + L+ Q +LL + ++L S L+ + ILA +SG +F Sbjct: 158 SQQYSQKMVAVMVLGIDDFTGISHALEHEQSNLLLRAVGQRLTSCLAQKDILAHLSGDEF 217 Query: 322 AVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD--LTAEQLYSR 379 A+ + + L Q +L+ +++ I+ Q+ SIG+ + D +QL + Sbjct: 218 AIARVEIPSIESIVKLSQLLLSALNKPFTIKGDQIHITASIGITINQPDNLHDVDQLLQQ 277 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A A + A+ +G++Q QF+ P+ Q+RL E+++ AL+ ++ ++ QP +++ + + Sbjct: 278 AHVALYQAKQQGRSQHQFYSPEINAQLQERLALENELHGALQRNEIVVYYQPIIDLQTQQ 337 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLP 498 + + E L+R Q P P I E GL+V +G WVL +C AWQ G+ + Sbjct: 338 ITAVEALVRWQHPTRGLVSPAKFIPIAEANGLIVEIGEWVLRTACLQNRAWQLAGLPPIR 397 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 +SVNLSA Q N+V + E++ + P L LEVTES + D +V IL+ LR G Sbjct: 398 MSVNLSARQFEESNLVELVGEIIQESGLHPSYLELEVTESSLMADIQRSVTILKQLRELG 457 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 V +ALDDFG GY+ L ++K P+++LKID+ FV+ + P +++ AII LA+SL Sbjct: 458 VWLALDDFGTGYSSLN---YLKRFPVNMLKIDRSFVQDVCSNPDSAAVTNAIIALAKSLQ 514 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 L++ AEG+ET+ Q +L K G QG+ F P P Sbjct: 515 LKITAEGIETQQQLSYLQKRGCQEGQGYYFGIPAP 549 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 149/435 (34%), Positives = 230/435 (52%), Gaps = 19/435 (4%) Query: 236 EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQ 291 +E N A P++ LPN+ LL + L Q +A + AL+ I + + L A+ Sbjct: 369 DEVNRLAFYDPLTQLPNRRLLRDRLAQALAASARSGMHGALIFIDLDNFKSLNDTLGHAR 428 Query: 292 REILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVLTIMS 346 + LL + ++L + +A++ G +F VI + + A +G+++L ++ Sbjct: 429 GDQLLKLVGQRLTHCVRESDTVARLGGDEFVVIVQDLGARLDECATQAEGVGEKILDALN 488 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + P++ SIG+ +F D + + L A A + A+ G+N ++FFD Sbjct: 489 QPYPLDGHVRHSTPSIGITLFADDRDSVDDLLKEADMAMYQAKTAGRNTLRFFDADMQAM 548 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 +R E D+ ++ F + QPQV + SG++ AEVLLR P P I Sbjct: 549 LVQRAALEEDMRESMRLSHFLLHYQPQV-VGSGRITGAEVLLRWPHPLRGLVPPAEFIPL 607 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTR 523 E L+ +GHWVLE +C+ LA W + M L +SVN+SA Q P+ VA+++ +L R Sbjct: 608 AEDTNLITALGHWVLETACKTLADWSAQDDMKHLSVSVNVSARQFRQPHFVAEVMSILER 667 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 P L LE+TES ++D VA + L++ GV +LDDFG GY+ L H+K LP Sbjct: 668 TGADPHLLKLELTESLLVEDVEDIVAKMSALKSRGVGFSLDDFGTGYS---SLAHLKRLP 724 Query: 584 IDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 +D LKID+ FV + P D ++ ++ LA SL L +IAEGVE AQR+ LA+ G Sbjct: 725 LDQLKIDQSFVRDILTDPNDLAIGRMVVALADSLGLTVIAEGVELAAQRELLAQIGCDAY 784 Query: 641 QGFLFARPLPIEIFE 655 QG+LF+RPLP E FE Sbjct: 785 QGYLFSRPLPREPFE 799 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 142/415 (34%), Positives = 225/415 (54%), Gaps = 12/415 (2%) Query: 246 PVSDLPNKALLMEMLEQVV--ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKL 303 P++ L N+ L LE + +Q+ A++ I + + A + LL + +L Sbjct: 330 PLTRLLNRDALFRKLEDICLSGIEQSFAVLFIDLDRFKLINDSFGHATGDNLLRIVAARL 389 Query: 304 KSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIG 363 V+ +LA+ G +F ++ + I + ++L +S+ + +E +L SIG Sbjct: 390 SFVVGSNALLARQGGDEFTLLLEDTGQRTAVIDMANRLLDELSQPITLENQELHITASIG 449 Query: 364 VAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 +A+ +G A L A +A + A+ GKN FF + +RL E+ + +AL Sbjct: 450 IALAPEHGK-DAATLLRHADTALYRAKDAGKNTFAFFTHTLHGLSNQRLALENALRHALP 508 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +Q + QPQ++ +LV EVLLR P+ P I E GL++ +G WVLE Sbjct: 509 RNQLTLAYQPQIDPHRQRLVGVEVLLRWHHPELGQVSPATFIPLAEETGLILPIGRWVLE 568 Query: 482 ESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +CR LAAW G + ++VNLSA Q P + + +L+ + L LEVTES Sbjct: 569 TACRQLAAWDTAGFSVGHVAVNLSAHQFNDPGLTHHLKAVLSDSGLAARRLELEVTESTL 628 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 I++P AA+A++ L+ GVR+++DDFG GY+ L QL K P+D LKID+ FV G+P D Sbjct: 629 INNPTAAIALMTELKELGVRLSIDDFGTGYSSLAQL---KRFPLDTLKIDRTFVSGIPAD 685 Query: 601 SSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 +S +A AII +A+ L+L ++AEGVET QRD+LA+ G + QG+ ++ PL E Sbjct: 686 ASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFLARCGSELIQGYFYSPPLAAE 740 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 152/451 (33%), Positives = 229/451 (50%), Gaps = 14/451 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQTT-- 270 DE G+L + + QR E+ A P++ LPN++ L L++ + R Sbjct: 334 DEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPLTRLPNRSRLTASLDEALTRMDGEDG 393 Query: 271 --ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A+M I + + + LL + +L V+ R +LA++ G +F ++ +G Sbjct: 394 RLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMSGF 453 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTA 387 + +L + + L +E ++ SIG+++F D A L A A + A Sbjct: 454 DSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTLLKNADVAMYRA 513 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + GKN QFFD +RL E+ + ALE H+F + QPQ+ L AE LL Sbjct: 514 KEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERHEFELHYQPQLSAGERALAGAEALL 573 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSAL 506 R + P P I E GL+ +G WVL E+CR LAAW +G+ +P L+VNLS Sbjct: 574 RWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPR 633 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q P++ A + L + G L LE+TES + P AV++L L++ GV +++DDF Sbjct: 634 QFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDF 693 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIA---AIIMLAQSLNLQMIAEGV 623 G GY+ L H+K P+D LKID+ FVEGLP D A AI+ +A+ L Q++AEGV Sbjct: 694 GTGYS---SLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGV 750 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 E+E Q +L G + QG+ F RPLP F Sbjct: 751 ESEEQAAFLEGKGCHVLQGYHFGRPLPAGEF 781 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 143/428 (33%), Positives = 231/428 (53%), Gaps = 17/428 (3%) Query: 237 EQNENAMRF-----PVSDLPNKALLMEMLE----QVVARKQTTALMIITCETLRDTAGVL 287 +Q E ++F P++ LPN++ L+ LE Q+ + Q A+M + + + Sbjct: 637 KQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRFKLINDSF 696 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + LL +L+ V+ R +A++ G +F ++ + TL + +L ++++ Sbjct: 697 GHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLVSHFASQATLSTLAEDILAVLAQ 756 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 L +E +L S+G++++ D + A L A A + A+ GKN QFF + A Sbjct: 757 PLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGKNTYQFFAAEMNAQA 816 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +RL E + ALE +F + QP V + +L + EVLLR + P+ P I Sbjct: 817 IERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFIPLA 876 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+ +G WV+ ++CR LA W G+ +P L++NLSA Q ++ + L Sbjct: 877 EETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQVAGALAEAG 936 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 I G L LE+TES + +P AV++L L+ GVR+++DDFG GY+ L ++K P+D Sbjct: 937 IAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYS---SLSYLKRFPLD 993 Query: 586 VLKIDKMFVEGLPGDSSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ F+EGLPGD A AI+ +A+ L+ ++AEGVETEAQ +L G + QG Sbjct: 994 TLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQG 1053 Query: 643 FLFARPLP 650 +LF+RPLP Sbjct: 1054 YLFSRPLP 1061 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 137/467 (29%), Positives = 242/467 (51%), Gaps = 28/467 (5%) Query: 213 QDDEIGMLVRSY------NLNQQ--------LLQRHYEEQNENAMRF--PVSDLPNKALL 256 Q+D++ L+R Y NQ+ + +R E+ + + ++ L N+ L Sbjct: 341 QNDKVTYLLRKYIPIDDSETNQKRFISFGVDITERKLSEERITYLAYYDALTGLANRTLF 400 Query: 257 MEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 ++ Q + ++T A + + L + +ILL + +LK V++ Sbjct: 401 IDHANQALKNHKSTETLLAFYFFDIDNFKFINDSLGHTKGDILLQMVGARLKRVMTEVDT 460 Query: 313 LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-L 371 +A+ G +FA++ V A Q++L I+S+ I L S+G+A+ D + Sbjct: 461 VARFGGDEFAILKVDVSNKSSAAEFAQKILDILSQPFHIMGRDLFTTISMGIALSPNDGV 520 Query: 372 TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 T+ +L + A + A+ G+N +F+ + + ++KRL E+ + A++N + ++ QP Sbjct: 521 TSAELLKNSDMAMYKAKELGRNNYKFYTNELILRSEKRLYIENSLRKAIQNEELLLFFQP 580 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ 491 ++ + ++ AE L+R + P+ W P I E G++ +G WVLEE+CRL W Sbjct: 581 KISTITNQVCGAEALIRWKHPERGWVPPIEFIPVAEDSGIIERIGDWVLEEACRLKKQWS 640 Query: 492 ERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 E+ + PLS+N+S QL N + + +Y I P + LE+TES +++P ++ Sbjct: 641 EKNLPSFPLSINVSGKQLARANWSHRVQATILQYGINPEEIELELTESSIMENPEKSIEA 700 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAI 607 L G++V++DDFG GY+ L ++K + DV+KID+ FV L D ++ AI Sbjct: 701 FEYLSELGIKVSIDDFGTGYSS---LSYLKKINADVIKIDRSFVVDLELNEDDRAICKAI 757 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 I +A SL L++IAEGVE AQRD L G + QG+L+++PLP + F Sbjct: 758 INMAHSLGLEVIAEGVENPAQRDLLHDLGCHMIQGYLYSKPLPEDEF 804 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 147/448 (32%), Positives = 236/448 (52%), Gaps = 21/448 (4%) Query: 225 NLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETL 280 LN++ L HY ++ P++DLPN+ LLME L + R + ALM + + Sbjct: 397 KLNEERL--HYLANHD-----PLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRF 449 Query: 281 RDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQ 340 + L A + LL T+ +L L +A++ G +F ++ +++ Q+ Sbjct: 450 KFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQK 509 Query: 341 VLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFD 399 ++ + + ++ + S+G+A++ D T E L A +A + A+ +GKN QFF Sbjct: 510 LIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFT 569 Query: 400 PQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLP 459 + RL ES++ AL +F + QP+V++ G + E LLR + + P Sbjct: 570 ADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSP 629 Query: 460 DGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP--LSVNLSALQLMHPNMVADM 517 I E L+ T+G WVLE++CR W G +LP ++VNLS+ Q+ ++VA + Sbjct: 630 ADFIPIAEESNLISTIGEWVLEQACRQARHWLNLG-LLPGTVAVNLSSKQMTQGDIVATV 688 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 +L + L LE+TES +D+ + L+ L+ GVR+A+DDFG GY+ L Sbjct: 689 RRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYS---SLS 745 Query: 578 HMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K LPIDVLKID+ FV L D+++ +AII + QSLNLQ +AEGVE E R +L Sbjct: 746 YLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLD 805 Query: 635 AGVGIAQGFLFARPLPIEIFEESYLEEK 662 G QG+LF+RP+P E+ LE + Sbjct: 806 HGCQYGQGYLFSRPVPAATMEQLLLESQ 833 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 138/415 (33%), Positives = 220/415 (53%), Gaps = 12/415 (2%) Query: 247 VSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 +++L N+ L E L Q +A + ALM+I + + L + LL+ + ++ Sbjct: 478 LTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKR 537 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + I+A++ G +F + G+ P A L + +S I+ +LR SI Sbjct: 538 LSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSI 597 Query: 363 GVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+ ++ GD + L A A + A+ G+ QFF A +R+ ESD+ A+ Sbjct: 598 GICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAIT 657 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +F + QPQ+++ SG +V E L+R Q P P I E G++ +G WVLE Sbjct: 658 RREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLE 717 Query: 482 ESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+CR L WQ RGI L +S+NLSA Q + + A + ELL + L LEVTES Sbjct: 718 EACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMS 777 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV---EGL 597 + P ++++++ L ++G+ +++DDFG GY+ L ++K LPI LKID+ FV E Sbjct: 778 MASPDESISVMKTLSSSGLTLSIDDFGTGYS---SLAYLKLLPIHTLKIDRSFVKDIESD 834 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 P D+ + ++LA L L+++AEGVETEAQ +L G QG+L ++PLP + Sbjct: 835 PNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPAD 889 >UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XC86_NAKMY Length = 1039 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 146/480 (30%), Positives = 253/480 (52%), Gaps = 23/480 (4%) Query: 188 NIARELNAIPAKELVGHQLALPRLHQ-DDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMR 244 + R++ + + ++ L H+ DE G ++ + + + +R E A+ Sbjct: 545 ELVRDVETVFGEPGADRRIVLSSAHRLQDEDGAVLGAVLVMHDVTERRRVESALIRQALH 604 Query: 245 FPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLV 300 P++DL N+ALL + L+Q +AR+Q AL+++ + + L + +L+T+ Sbjct: 605 DPLTDLANRALLGDRLDQAIARQQRQPEPFALLLLDLDGFKLVNDSLGHQAGDQVLITVA 664 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 +L++ L +A++ G +FAV+ + A+ + +Q+L ++ + + + P Sbjct: 665 TRLRTSLWAEDTVARLGGDEFAVLLERTCDS-QALAIAEQLLGVLRRPVQVHAHTITPDA 723 Query: 361 SIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 S+GVA+ GD TAE + A A + A+ GK +Q + E+ +RL ++++ A+ Sbjct: 724 SVGVALSTGDDTAESMLRNADLAMYAAKDAGKGVVQVYRASMHESVLQRLIMDAELRLAI 783 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 + QF++ QP + + SG+L E LLR Q P P I E GL+V +G WVL Sbjct: 784 DEQQFSVHYQPIISLISGQLRGFEALLRWQHPVRGDIPPSSFIPLAESSGLIVPLGGWVL 843 Query: 481 EESCRLLAAWQERGIMLP------LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILE 534 E+C A W+ + P +SVNLS Q+ P +VA +LE LT ++PG L LE Sbjct: 844 REACSQAARWRR---LFPPTRSLTMSVNLSVRQIQEPTLVATVLEALTDAGLEPGDLQLE 900 Query: 535 VTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV 594 +TES +D + + +L L + G+++A+DDFG GY+ L +L +LP+D +KID+ F+ Sbjct: 901 ITES-TLDQRNLILGVLHELHDKGIKLAIDDFGTGYSSLSRLH---TLPVDRVKIDRSFI 956 Query: 595 EGLPGD--SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 E L G + ++AA + +A SL +Q AEG+E+ Q L G QG+ RP+ E Sbjct: 957 ELLAGSNPAPLVAATVAMAHSLGMQTTAEGIESADQLPMLRMYGCDDGQGYYLGRPMSAE 1016 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 147/464 (31%), Positives = 246/464 (53%), Gaps = 35/464 (7%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVA----RKQ 268 D++G + R+ + + + EQ + + F P++ LPN+ L + LEQ + Q Sbjct: 472 DDLGTVRRAIEVVTDITDKKNREQEIHRLAFYDPLTRLPNRRLFFDRLEQAFSASARSGQ 531 Query: 269 TTALMIITCE---TLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIA 325 A++ + + TL DT G ++LL E+L+ + +++ G +F V+ Sbjct: 532 HGAVLFLDLDNFKTLNDTRG---HDVGDLLLTMAAERLQEAVRANDTISRQGGDEFMVLL 588 Query: 326 NGVQEPWHAIT-----LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSR 379 N + HA + +++ + + ++ + SIG+++F G D A++L+ R Sbjct: 589 NNLSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTPADELFKR 648 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A +A + A+H G+NQ++FFDP+ ++ D+ A+ QF + QPQ G+ Sbjct: 649 ADAAMYQAKHAGRNQVRFFDPEMQAELEQASALVVDLRQAIWQGQFQLHYQPQT-ANDGR 707 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP- 498 ++ AE LLR + P+ P I E L++ +G WVLEE+C LAAW + LP Sbjct: 708 IIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWAD----LPA 763 Query: 499 -----LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP 553 L+VN+SA Q P VA++ +L P L LE+TES + + V+ ++ Sbjct: 764 AGNCKLAVNVSARQFRQPEFVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQE 823 Query: 554 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIML 610 LR+ G+ ++DDFG GY+ L QL K LP++ LKID+ FV L P D +++ II + Sbjct: 824 LRDLGIGFSMDDFGTGYSSLAQL---KRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAM 880 Query: 611 AQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 ++L++Q+IAEGVET+ Q LA+ G QG+LF+RP+P F Sbjct: 881 GRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAAQF 924 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 143/454 (31%), Positives = 233/454 (51%), Gaps = 21/454 (4%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRFP--VSDLPNKALLMEMLEQVVA----RKQ 268 D+ G + + + + +R E + F ++ LPN+ LL + L+QV+A ++ Sbjct: 575 DDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRSRR 634 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ I + ++ Q ++LL + ++L + +A++ G DF V+ + Sbjct: 635 HGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQDL 694 Query: 329 QE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAIS 382 E A +GQ++L + + P S+GVA+F T E+L RA Sbjct: 695 SEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVALFNASQDTVEELLKRADL 754 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVS 442 A + A+ G+N ++FFDP R E+D+ L+ +QF ++ QPQV +G+L+ Sbjct: 755 ALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRLGLQENQFLLYYQPQVNH-AGRLIG 813 Query: 443 AEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPLS 500 E L+R Q P P I E GL++ +G WV+E +CR L W Q L ++ Sbjct: 814 VEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIA 873 Query: 501 VNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVR 560 VN+SALQ + V+D+L L R L LE+TES + D +A + L+ GV Sbjct: 874 VNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVG 933 Query: 561 VALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQ 617 +LDDFG GY+ L ++K LP+D +KID+ FV P D++++ A + + + L + Sbjct: 934 FSLDDFGTGYS---SLSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGMM 990 Query: 618 MIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 +IAEGVET+ QRD+L G QG+ F RP+P+ Sbjct: 991 VIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPV 1024 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 142/436 (32%), Positives = 242/436 (55%), Gaps = 21/436 (4%) Query: 236 EEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQ 291 EE N+ A ++ LPN+ LL++ L +A + +A+M I + +D L Sbjct: 152 EELNDLAFYDTLTGLPNRRLLIDRLHHALASNVRQGCESAVMFIDLDHFKDINDTLGHEV 211 Query: 292 REILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE-PWHAIT----LGQQVLTIMS 346 ++LL+ ++L+S L +A++ G +F +I + E P A T + ++L ++ Sbjct: 212 GDLLLIQTAQRLESCLRKGDTVARLGGDEFMLILENLDENPIEAATKAKAIADKILAELN 271 Query: 347 ERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + ++ + SIG F + TAE L +A A + A+ G N I+FF+P+ E+ Sbjct: 272 KPYQLDMHKCHSTVSIGAVFFDHQGNTAEDLIKQADIAMYQAKQAGGNLIRFFNPKMQES 331 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 R+T E+++ A+E QF ++ Q Q++ + +++ AE L+R P+ LP I Sbjct: 332 INARITLENELRIAIEKSQFHLYYQIQMD-SDNRVLGAEALIRWTNPEHGLVLPATFIPI 390 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTR 523 E GL++++G WV+E +C + WQ++ L L+VN+SA Q + V + + R Sbjct: 391 AEETGLILSIGKWVIETACAQIKVWQKKSQTRDLTLAVNVSAKQFRQKDFVDQVQSAVQR 450 Query: 524 YRIQPGTLI-LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSL 582 + I PG L+ LE+TES D +A+++ L GV+ +LDDFG GY+ L Q++K L Sbjct: 451 HAI-PGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSSL---QYLKRL 506 Query: 583 PIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGI 639 P+D KID+ FV + D +++ AII +AQ L++ +IAEGVETE Q+ L G + Sbjct: 507 PLDQFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLLLGKGCTL 566 Query: 640 AQGFLFARPLPIEIFE 655 QG+LF++P+PI+ F+ Sbjct: 567 YQGYLFSKPIPIDQFD 582 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 142/431 (32%), Positives = 230/431 (53%), Gaps = 12/431 (2%) Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLK 288 R+ E + A ++ L N+ LL + +++ + R A+M++ + + L Sbjct: 646 RYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLG 705 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 A + LL +L + + +A++ G +F V+ + + A L +VL ++E Sbjct: 706 HAAGDALLQETARRLSASVRRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEP 765 Query: 349 LPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + + ++ SIGV+++ D A L A A + A+ G+N+ QF+ P+ E Sbjct: 766 MLLNGREIVATGSIGVSLYPRDGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERIL 825 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +RL E+ + ALEN + + QP+V + G+++ AE L+R + P P I E Sbjct: 826 ERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAE 885 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL+V +G WV++ +CR L AW + G+ + ++VN+SA Q H + + L +R+ Sbjct: 886 ETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRL 945 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 PG L +EVTES + +P + LR L+N GVR++LDDFG GY L ++K PID Sbjct: 946 PPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYC---SLNYLKRFPIDS 1002 Query: 587 LKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 +KID+ FV L D+++ I+ LA SLN +IAEGVE EAQ D+L + G QGF Sbjct: 1003 IKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGF 1062 Query: 644 LFARPLPIEIF 654 LF+RPLP F Sbjct: 1063 LFSRPLPAAEF 1073 >UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG75_THIDA Length = 954 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 136/421 (32%), Positives = 226/421 (53%), Gaps = 16/421 (3%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLL 297 A P++DLPN+ALL++ L V+R T A++ I + + L A + +L Sbjct: 515 AYHDPLTDLPNRALLLDRLRAAVSRNGRTGGRLAVVFIDLDRFKTINDSLGHAVGDAVLQ 574 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 +L+S+ LA++ G +F ++ +G+++ A + ++++T + L + L Sbjct: 575 AAASRLRSLTRDGDTLARLGGDEFVLLLDGLRDNAAAGAVAEKIITALERMLHVGSYPLH 634 Query: 358 PHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG++++ D AE L A +A + ++ +G+N F++ E A +RL ES + Sbjct: 635 ISASIGISLYPEDGRDAEALLRHADAAMYKSKERGRNTFHFYEHGITERAMRRLQLESRL 694 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 A ++ + QP V + +G + AE LLR P+ PD I E GL+V +G Sbjct: 695 RRAFDDRTLQVHYQPLVRLDTGHICGAEALLRWNDPEAGAIPPDHFIALAEDTGLIVPIG 754 Query: 477 HWVLEESCRLLAAWQERGIMLP----LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 WV+ E+C L W E I+LP L VNLS QL+ ++ + + TR + P ++ Sbjct: 755 EWVVGEACEALKRW-ETEILLPADFALHVNLSGKQLLQKDLPTRLSDAFTRAGVSPARVV 813 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 LE+TES ++ VA++ LR GV +A+DDFG G++ L +L K LPI LKID+ Sbjct: 814 LELTESSIMESEATGVAVMTALREFGVEIAIDDFGTGHSSLSRL---KLLPISELKIDRS 870 Query: 593 FVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 F+ + D++++ AI+ L+ L L +IAEGVE Q +L + G AQG+ +ARP+ Sbjct: 871 FIRDIAVDSDDAAIVQAILALSAKLGLGVIAEGVEHAEQEAFLMQHGCLRAQGYRYARPM 930 Query: 650 P 650 P Sbjct: 931 P 931 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 148/430 (34%), Positives = 224/430 (52%), Gaps = 25/430 (5%) Query: 247 VSDLPNKALLMEMLEQVVARKQTTA-------LMIITCETLRDTAGVLKEAQREILLLTL 299 ++ LPN+ LLME LE Q L + +TL DT G + L + Sbjct: 486 LTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTLNDTRG---HDTGDKFLTLV 542 Query: 300 VEKLKSVLSPRMILAQISGYDFAVIANGVQEPW-----HAITLGQQVLTIMSERLPIERI 354 ++L + +A+I G +F +I + A L +++L +S+ I+ I Sbjct: 543 SQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKPYYIDNI 602 Query: 355 QLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEE 413 + SIGV +F G+ ++L A A + A+ G+N +FF+P+ + Sbjct: 603 EHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRNTHRFFNPEMQAKVLEHAAMA 662 Query: 414 SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMV 473 +DI +AL ++F ++ QPQV G+L AE L+R Q P P I E GL++ Sbjct: 663 NDIRHALTRNEFTLYYQPQV-THDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETGLIL 721 Query: 474 TVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTL 531 +G WVL+++C++LA WQ + L L++N+SA Q V +LE L RYR P L Sbjct: 722 PLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRANPDRL 781 Query: 532 ILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDK 591 LE+TES +D + + L+ GV +LDDFG GY+ L ++K LP+D LKIDK Sbjct: 782 KLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSS---LNYLKRLPLDQLKIDK 838 Query: 592 MFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARP 648 FV L D+ + I+ LA+S+NL +IAEGVET+ QR LA G QG+LF+RP Sbjct: 839 SFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRP 898 Query: 649 LPIEIFEESY 658 +P+E F +Y Sbjct: 899 VPLEAFPFNY 908 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 145/446 (32%), Positives = 231/446 (51%), Gaps = 21/446 (4%) Query: 230 LLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDT 283 + QR +E + + + F ++ LPN+ L E L+ ++ +Q A+ I + ++ Sbjct: 442 ITQRKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGAVFFIDLDNFKNL 501 Query: 284 AGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN--GVQEP---WHAITLG 338 Q + LL+ + +L S + ++A++ G +F VI GV E + Sbjct: 502 NDTAGHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLGVDESNVLAQVKDIV 561 Query: 339 QQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFF 398 +V+ + L I P CSIG+A+F ++++ R+ A + A+ GKN +FF Sbjct: 562 AKVILTIQAPLTIGTQAYHPTCSIGIALFSEKDFSDEVMKRSDMAMYQAKSSGKNTYRFF 621 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 DP EA ++D+ AL N Q + QPQ + L+ AE LLR + PD Sbjct: 622 DPVAEEALCSLARMDADLRFALSNQQLELHYQPQYRCQT--LIGAEALLRWKHPDRGMVS 679 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER--GIMLPLSVNLSALQLMHPNMVAD 516 P I E GL++ +G WV+ ++C+ L WQER L ++VN+SA Q N V Sbjct: 680 PAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVNVSARQFCQDNFVES 739 Query: 517 MLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQL 576 + +LL Y + L LE+TES + D + ++ LR+ G+R ALDDFG GY+ L Sbjct: 740 VRQLLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALDDFGTGYS---SL 796 Query: 577 QHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLA 633 H+K LP+D +KID+ F+ +P DS ++ AII + Q+L L ++AEGVET+ Q +L Sbjct: 797 SHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEGVETDEQLAFLT 856 Query: 634 KAGVGIAQGFLFARPLPIEIFEESYL 659 + QGFL RP I+ FE +Y+ Sbjct: 857 ELDCLDIQGFLLGRPSSIDKFETTYI 882 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 137/426 (32%), Positives = 228/426 (53%), Gaps = 12/426 (2%) Query: 246 PVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN++L + L+ +A+ + AL+I+ + + L + ++LL + E Sbjct: 430 PLTGLPNRSLFSDRLKMALAQSKRNNEMCALIILDLDNFKAINDTLGHSVGDMLLKQVAE 489 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 K+K L +A+I G +F +I +++ A ++L + +E + S Sbjct: 490 KIKGYLREVDTVARIGGDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITAS 549 Query: 362 IGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 +G+ ++ G + ++ A +A + A+ G+N Q + + +RL E+ + A+ Sbjct: 550 MGIGIYPNGGEDPQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAI 609 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E +F ++ QPQ+++ +GK+V E LLR PD P I E GL+V +G WVL Sbjct: 610 EKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVL 669 Query: 481 EESCRLLAAWQERGIMLPL-SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 E +CR W E G+ L SVNLSA Q N+V + + + + P L LE+TES Sbjct: 670 ETACRQNKKWIECGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITEST 729 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG 599 + D + +L LR G+RV+LDDFG GY+ L +++ LPID LKIDK FV+ + Sbjct: 730 AMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYS---SLNYLRQLPIDTLKIDKSFVQDIRA 786 Query: 600 DS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 +S ++ +I LA L+L ++AEGVET+ Q +L K AQG+LF++PLP E E+ Sbjct: 787 NSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEK 846 Query: 657 SYLEEK 662 ++K Sbjct: 847 MLRDKK 852 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 145/448 (32%), Positives = 235/448 (52%), Gaps = 15/448 (3%) Query: 225 NLNQQLLQRHYEEQNENAMRF-PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCET 279 +N Q+ EEQ E F ++ L N+ L L Q + + A++ + + Sbjct: 575 TVNDVTDQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVDLDK 634 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 + L A +++L + +L P ILA++ G +F ++ G E A + Sbjct: 635 FKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVLPGADER-AASEVAA 693 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFF 398 +LT MS + ++ +L +IGV+++ D A+ L A A + A+ +G+N Q + Sbjct: 694 CILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRNTFQLY 753 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 P AA +RL + ++ NA + + QPQ+++T G +V E L+R + P Sbjct: 754 TPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVS 813 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADM 517 P I E GL++T+G+W + E+CR WQ G+ L ++VNLS Q N A + Sbjct: 814 PGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVV 873 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 + L + P L LE+TES + D +A L L+ GV++++DDFG GY+ L Sbjct: 874 ADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYS---SLN 930 Query: 578 HMKSLPIDVLKIDKMF---VEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K P+D+LKID+ F VE P D++++ AII L + LNL++IAEGVET+ Q D+L Sbjct: 931 YLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHA 990 Query: 635 AGVGIAQGFLFARPLPIEIFEESYLEEK 662 AGV QG+ F+RPLP E +YL ++ Sbjct: 991 AGVDFIQGYYFSRPLPAEDM-ATYLAQR 1017 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 143/451 (31%), Positives = 238/451 (52%), Gaps = 26/451 (5%) Query: 217 IGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVAR----KQTT 270 IGM V + +RH EQ E A ++ LPN+ALL + +E+ + +Q Sbjct: 131 IGMFV-------DITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRV 183 Query: 271 ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE 330 AL+ I + + L + LL + + S++ +A+ G +F V+ + ++ Sbjct: 184 ALLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLES 243 Query: 331 PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYS---RAISAAFTA 387 + A + Q++L + I+ +L SIG+++F D E +++ + A + A Sbjct: 244 AFDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDD--GEDIWTLLRNSDIAMYHA 301 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G+N +FF P+ A++R + E + NAL+ + + QP V + GK EVLL Sbjct: 302 KKNGRNNCEFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLL 361 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSAL 506 R Q P P I E G+++ +G W++ +SC + AWQE+G +P L++NLSA+ Sbjct: 362 RWQHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAI 421 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q ++ +++ +L + L LE+TES I+D + LR L G+ +++DDF Sbjct: 422 QFRQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDF 481 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L +K I+ LKID+ FV + P D+++I AI+++A +L LQ+IAEGV Sbjct: 482 GTGYS---NLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGV 538 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLP-IEI 653 E E Q +LA G QGF F++PLP IEI Sbjct: 539 ENEQQLAYLALHGCTRFQGFYFSKPLPAIEI 569 >UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCU3_9GAMM Length = 723 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 136/460 (29%), Positives = 243/460 (52%), Gaps = 18/460 (3%) Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFP-VSDLPNKALLMEMLEQVVA 265 A P + DD G+++ ++ ++ R EEQ ++ ++ L N+ +L++ ++ Sbjct: 254 ATPMMVDDDLAGIVIAFQDITER---RRTEEQLARLAQYDALTGLVNRNAFNGLLKKALS 310 Query: 266 R----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDF 321 R +Q AL+ I + + + LL + +L + I+ ++ G +F Sbjct: 311 RSARHEQPLALLFIDLDQFKTINDNHGHEIGDSLLQEVAMRLTDCVRNGDIIGRLGGDEF 370 Query: 322 AVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRA 380 ++ +Q A + Q VL + I Q+ SIG+A++ LTA +L A Sbjct: 371 VIMLESLQATKDAARVSQSVLDALEAPFTIRGHQIFIGASIGIAVYPDSALTARELLRCA 430 Query: 381 ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKL 440 A + ++ +G+N+ +FF + E+ ++ L E D+ A +F I+LQP++ M + + Sbjct: 431 DIAMYRSKEEGRNRYRFFTDEMQESVREALQLEIDLRRAYRQQEFDIYLQPKICMATESV 490 Query: 441 VSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG---IML 497 + AE+L+R +PDGS+ PD I + E GL+ +G WV E+C + +WQ++ + Sbjct: 491 IGAEILIRWPRPDGSFLPPDVFIPKAEEMGLIHDIGEWVFRETCDTIRSWQQQNRIPLDF 550 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 ++N+S QL ++ D+ ++ I P L +EVTES + DP + L L Sbjct: 551 TFAINISMRQLHTGHLAEDIAAIVKEVGIDPNCLEVEVTESIMMQDPRVTIDALNALHQQ 610 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSL 614 +++++DDFG GY+ L H++ LPID +KIDK FV+ L D +++ II L +L Sbjct: 611 KIKISIDDFGTGYSSL---SHLRQLPIDAIKIDKSFVQALESDGQADAIVNTIISLGHNL 667 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 ++++IAEG+ETEA R L AG +AQG+ +A+P+ E F Sbjct: 668 DMRVIAEGIETEANRQALTAAGCDVAQGYFYAKPMCREDF 707 >UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5U6_ALHEH Length = 802 Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 143/433 (33%), Positives = 240/433 (55%), Gaps = 14/433 (3%) Query: 228 QQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDT 283 ++ L++H A P++DLPN+ LL LEQ VAR Q A++ + + ++ Sbjct: 356 ERQLRQHQARLTHLANHDPLTDLPNRLLLTTRLEQAVARATGSGQRVAVLFLDLDRFKNI 415 Query: 284 AGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLT 343 L A + LL L E+L+S + + A++ G +F V+ +G+ + +++L Sbjct: 416 NDSLGHAVGDDLLRILAERLRSQVEANTV-ARLGGDEFIVLLDGISDLELVDQQARELLE 474 Query: 344 IMSERLPIERIQ-LRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +++E + + L+ SIG+++F + A +L ++A +A + A+ +G+N ++++ Sbjct: 475 LVAESFSVGGWRSLQVGGSIGISLFPDNAQDASELITQADAAMYLAKAEGRNTYRYYNQS 534 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 AA +RL E+ + ALE ++ QPQ+++T+G L E L+R + P+ PD Sbjct: 535 LTAAASERLETETRLRRALELDHLEVFYQPQLDITTGALTGVEALVRWRDPEQGLIPPDR 594 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLEL 520 I E GL+ +G VLE +C +AAW G+ L ++VNLSA Q+ P + A + Sbjct: 595 FIPVAEETGLIDRLGQQVLERACLQVAAWDRDGLPALDVAVNLSAHQIGDPRLCAKIRHA 654 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L R + P L+LE+TES + A+ L L+ GV+VA+DDFG GY+ L ++K Sbjct: 655 LERSGLAPRRLVLEITESTLMTQAEGALGTLAGLKGLGVQVAIDDFGTGYS---SLAYLK 711 Query: 581 SLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 ID LK+D+ FV+ LP D+ + I+ +A +L L+++AEGVET+AQ D+L G Sbjct: 712 RFAIDWLKVDRCFVQDLPEDRNDAELTQTIVYMAHNLGLRVLAEGVETQAQLDFLTHLGC 771 Query: 638 GIAQGFLFARPLP 650 QGFL + PLP Sbjct: 772 DGWQGFLCSPPLP 784 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 129/416 (31%), Positives = 233/416 (56%), Gaps = 12/416 (2%) Query: 246 PVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P+++LPN++L ++ L Q + ++ ++ + + + + + LL+ + + Sbjct: 591 PLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFADLDRFKIVNDTMGHSTGDELLIHVAK 650 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +L+ + +A++ G +FA+I + + +P A + ++V++ + +E ++ S Sbjct: 651 RLQQCVRSCDTVARLGGDEFALILSDLVQPEDATLIAEKVISALQVPFELETQEIYVSAS 710 Query: 362 IGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 +G++++ GD T A+ L A +A F A+ +G QF+ PQ E A RL E+ + AL Sbjct: 711 LGISIYPGDGTDADSLLRNADTAMFQAKEQGPAIYQFYLPQMNERAVARLKIETQLRGAL 770 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 +F + QP+ + +G++ E LLR Q P P I +E GL+V VG WV+ Sbjct: 771 ARREFVLHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFISVLEDTGLIVAVGEWVV 830 Query: 481 EESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 + C + WQ +G++L P+++NLSA Q ++ + + E L I P L E+TES Sbjct: 831 KTVCEQIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETLRATNIDPRLLEFELTESV 890 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 + + A L+ L+ GV++++DDFG GY+ L ++K P+DVLKID+ F+ + Sbjct: 891 LMKEAEMAANALQNLKAFGVQISMDDFGTGYSS---LAYLKRFPLDVLKIDRAFIRDVTT 947 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 P D+++ A+I LA SL L+++AEGVET AQ ++L + G QG+ F++PLP+E Sbjct: 948 DPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGYYFSQPLPLE 1003 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 137/428 (32%), Positives = 232/428 (54%), Gaps = 17/428 (3%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVA-----RKQTTALMIITCETLRDTAGVLKEAQREILL 296 A+ ++ L N+ L ++ LEQ V RKQ AL+ + + + L + LL Sbjct: 206 ALYDSLTGLANRRLFVDRLEQAVKAASRDRKQI-ALLFLDLDQFKRINDTLGHDAGDSLL 264 Query: 297 LTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQL 356 T+ ++LK+ + + +A++ G +F V+ + + + + Q+L + E + +++ ++ Sbjct: 265 QTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEV 324 Query: 357 RPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 SIGV + D A+ L A A + A+ G+++ F+ + A K+L E + Sbjct: 325 IVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAHALKQLLMEQE 384 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 + +AL+ +F + QPQV +T+GK+VS E L+R P +PD I E GL+ + Sbjct: 385 LRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPI 444 Query: 476 GHWVLEESCRLLAAWQE-RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILE 534 G WVL+ +C + Q+ G + ++VNLSA Q P + + E L ++P L LE Sbjct: 445 GRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELE 504 Query: 535 VTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV 594 VTES + D A L+ LR GV +A+DDFG GY+ L ++K LP++ LK+D+ FV Sbjct: 505 VTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSS---LSYLKKLPVNALKVDREFV 561 Query: 595 EGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 +P DS+ + +AII +A L L+++AEGVET Q+++L AQG+ F++PL Sbjct: 562 RDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLS- 620 Query: 652 EIFEESYL 659 FE+ Y+ Sbjct: 621 --FEDLYI 626 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 144/449 (32%), Positives = 231/449 (51%), Gaps = 15/449 (3%) Query: 216 EIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK----ALLMEMLEQVVARKQTTA 271 E L S N L EE A ++ LPN+ L M+ + + T A Sbjct: 413 EFKHLASSVNSMIDGLNMQAEELRHRAFHDHLTSLPNRMHSSTQLDLMISHTIKHQATAA 472 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 L+ I + ++ L + + LL + ++L+ + I+A++ G +F VI ++ Sbjct: 473 LLFIDLDHFKEINDTLGHSTGDELLRKVSQRLRRSVREEDIVARLGGDEFTVITGVLETR 532 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF--YGDLTAEQLYSRAISAAFTARH 389 A ++ Q++L + I+ +L SIGV+ F GD +E L A SA + A+ Sbjct: 533 SDAESIAQKLLNELIRPYLIDGNELSVTASIGVSFFPEDGD-NSEILLRNADSAMYEAKR 591 Query: 390 KGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRI 449 G+N + + E +R ++ A+ + ++ QPQV++ +G ++ AE LLR Sbjct: 592 NGRNGYRLYTSAMTEEISERFALTEELREAISREELELYFQPQVDIRTGSILGAEALLRW 651 Query: 450 QQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQL 508 P PD I E G M+ +G WVLE+ C +A W+ERGI+ P ++VN+S Q Sbjct: 652 NHPQRGMIPPDRFIPIAESSGQMIKIGAWVLEQVCAKVAGWKERGIVAPKIAVNISNQQ- 710 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 M+ +V + ELL + P L LE+TES +++P L L+ GV +A+DDFG Sbjct: 711 MNRELVEQITELLASSKCDPACLELEITESCLMENPEQMAHELSSLKALGVGIAIDDFGT 770 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIA---AIIMLAQSLNLQMIAEGVET 625 GY+ L ++K LPI+ LK+D+ FV L D + +A AI+ + QS+NL +IAEG+ET Sbjct: 771 GYS---SLSYLKQLPINKLKVDRSFVSDLQDDENDLAITRAIVAMGQSMNLNVIAEGIET 827 Query: 626 EAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 + Q D L K QG+ +++PLP E F Sbjct: 828 QEQIDLLLKLECFEGQGYFYSKPLPEEQF 856 >UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9A3_KANKD Length = 1515 Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 135/414 (32%), Positives = 229/414 (55%), Gaps = 14/414 (3%) Query: 247 VSDLPNKALLMEMLEQVV---ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKL 303 ++DL N+ + E ++ R AL+ I + + L + LL+ + + L Sbjct: 1081 LTDLKNRTSFRTLFEHLIEDSGRGDQHALLFIDLDNFKRINDSLGHGIGDELLIYVAKIL 1140 Query: 304 KSVLSPRM-ILAQISGYDFAVIANGVQEPWHA-ITLGQQVLTIMSERLPIERIQLRPHCS 361 + ++S + ++A++ G +F V+ V + W+ + Q +L ++ LP+ ++ S Sbjct: 1141 QEIVSDQNGVVARLGGDEFTVLLQEV-DTWNKPAKIAQAILDEFAKSLPLSTAEVVVSPS 1199 Query: 362 IGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+ M+ + T AE+L A +A + A+ KGKN QF+ Q E A+ R+T ES++ A+ Sbjct: 1200 IGIVMYPENGTSAEELLKNADTAMYYAKKKGKNTYQFYTRQMNEQAKLRITLESELRQAI 1259 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E +F ++ QP+V + +GK+ E L+R + P LP I E G ++ + V+ Sbjct: 1260 EKDEFVMFYQPKVSLQTGKITGMEALVRWRNPRRGLVLPGEFIPLAEEAGFIIPISQRVI 1319 Query: 481 EESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 E++C + WQ RGI ++VNLSA+Q H N+ + L +I+P L E+TE Sbjct: 1320 EKTCLQIRDWQNRGIFHGKVAVNLSAVQFYHENLWETVKNALHLAKIEPDALEFEITEGM 1379 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG 599 ++D ++ +R LR G+ +ALDDFG+GY+ L L K PID LKID+ FV L Sbjct: 1380 VMEDLAQSLQQMRTLREMGISLALDDFGVGYSSLGNL---KDFPIDTLKIDRTFVWDLED 1436 Query: 600 ---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 D +++A+I+ LA +L+++++AEGVE Q D L + G QGF+F+RP+P Sbjct: 1437 SDRDRNLVASIVTLAHNLDIKVVAEGVENRNQVDALREMGCEEIQGFIFSRPVP 1490 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 127/424 (29%), Positives = 230/424 (54%), Gaps = 13/424 (3%) Query: 246 PVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 ++ LPN+ +L++ L + +R+Q ALM + + ++ L ++LL + Sbjct: 585 TLTGLPNRRMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTLGHDMGDMLLSEAAK 644 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +LK+ + ++A++ G +F ++ +GV + + + +LT ++E + S Sbjct: 645 RLKACIRDSDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAEPYNLGEETAYISAS 704 Query: 362 IGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+ ++ D T E L A A + A+ +G+N+ +F P A+ R+ D+ +A+ Sbjct: 705 IGITLYPDDASTIEGLLKHADQAMYAAKDEGRNRFHYFTPSMQRYAKYRMRLIQDLRSAI 764 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 +H+F ++ QP V + G + AE L+R + P P I E GL++ +G+WV Sbjct: 765 ADHEFELYYQPIVSLQGGLGLKAEALIRWRHPKRGLVSPIEFIAVAEETGLIIEIGNWVF 824 Query: 481 EESCRLLAAWQER-GIMLPLSVNLSALQLMHPN-MVADMLELLTRYRIQPGTLILEVTES 538 +++ R A W++R GI + +S+N S +Q + + LL + + +E+TE Sbjct: 825 QQAARQSALWRDRFGIEVQISINKSPVQFRDEGESINSWVNLLKTLNLTNNNICIEITEG 884 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP 598 +D A + L R++G++++LDDFG GY+ L ++K ID LKID+ F L Sbjct: 885 LLLDGNSAISSKLTQYRDSGIQISLDDFGTGYS---SLAYLKKFDIDFLKIDQSFTRNLD 941 Query: 599 GDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 +S ++ AII++A L +++IAEGVET+ QR LA AG QG+LF+RP+P+E FE Sbjct: 942 SNSDDFTLCEAIIVMAHKLGMKVIAEGVETDYQRKILANAGCDFGQGYLFSRPVPVEKFE 1001 Query: 656 ESYL 659 +++L Sbjct: 1002 QAFL 1005 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 149/461 (32%), Positives = 240/461 (52%), Gaps = 23/461 (4%) Query: 215 DEIG--MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT-- 270 DE G M +R +N +R EE A P++ LPN+ LL++ L+ +A + Sbjct: 683 DEHGELMGLRGTGMNITDRKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHALASSTRSGR 742 Query: 271 --ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ I + + L ++LL + +L S + +A++ G +F V+ + Sbjct: 743 EGALLFIDLDNFKTLNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFVVMLEEL 802 Query: 329 QE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAIS 382 E ++G+++L +++ + + R SIG +F + E+L +A Sbjct: 803 SEQTLEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEELLKQADI 862 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTS-GKLV 441 A + A+ G+N ++FFDPQ E R E ++ ALEN QF ++ Q ++MT + Sbjct: 863 AMYQAKKAGRNTLRFFDPQMQETVIARALLERELSKALENDQFQLYYQ--IQMTDLNEPF 920 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPL 499 AE L+R P+ P+ I E GL++ +G WVL+ +C + W++ L L Sbjct: 921 GAEALIRWIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVL 980 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 +VN+SA + V + +L R+ I P L LE+TES ++ + + L+ GV Sbjct: 981 AVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGV 1040 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNL 616 + A+DDFG GY+ LQ++K LP+D LKID+ FV + DSS ++ I+ +A SLNL Sbjct: 1041 QFAMDDFGTGYS---SLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNL 1097 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 +IAEGVETE QR L ++G QG+LF +P PI FEES Sbjct: 1098 DVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPIRQFEES 1138 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 138/438 (31%), Positives = 234/438 (53%), Gaps = 14/438 (3%) Query: 226 LNQQLLQRHYEEQ-NENAMRFPVSDLPNKALLMEMLEQVVA-----RKQTTALMIITCET 279 +N R YEEQ A P++ LPN+ LL + L Q +A R+ +M + + Sbjct: 443 MNDITEHRRYEEQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDN 502 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 + L ++LL + +LK+ L +A++ G ++ ++ V+E IT+ + Sbjct: 503 FKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAK 562 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFF 398 +++ + + L + ++ SIG+A+F D T + L A +A + A+ +GKN QF+ Sbjct: 563 KMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKNNYQFY 622 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 + +RL+ E+ + A++N +F + QP+V++ +G++ E L+R P+ Sbjct: 623 SAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVS 682 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADM 517 P I E GL+V +G WVL +C AWQ+ G+ L ++VNLSA Q N++A + Sbjct: 683 PAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMV 742 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 E+L + P L LE+TES + + + AILR L + G+ VA+DDFG GY+ L Sbjct: 743 EEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYS---SLS 799 Query: 578 HMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K PI LKID+ F+ + P D++++ II +A L ++ IAEGVE Q D+L + Sbjct: 800 YLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCR 859 Query: 635 AGVGIAQGFLFARPLPIE 652 QG+ F+RP+ E Sbjct: 860 HQCEEMQGYYFSRPITAE 877 >UniRef50_A0LAZ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAZ4_MAGSM Length = 1118 Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 141/436 (32%), Positives = 235/436 (53%), Gaps = 15/436 (3%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARK----QTTALMIITCETLRDTAGV 286 L+R EE A P++ LPN+ L E L + R + L+ I + R+ Sbjct: 536 LKRAQEELVRRATHDPLTGLPNRTLFRERLTSALHRSHQNGENIGLLFINLDGFREINDS 595 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 ++LL + ++L +V++ + +++G +F ++ +Q P +L V ++ Sbjct: 596 YGHEMGDLLLEEVSQRLITVVNQGDTVGRLAGDEFIILCEHIQNPEPLSSLAVSVTNVIR 655 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 E + + ++LR SIG+A+ +G +A+ L A SA + + +G+N +FF+P E Sbjct: 656 EPIVHDDLKLRVTASIGIALGHGSTHSADDLMRSADSAMNSVKERGRNGWEFFNPTLQEE 715 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 A+KRL + + A++N++F QP V+ SG + AE+L+R + DG P I Sbjct: 716 AEKRLAISTGLRTAIDNNEFYARYQPIVDSESGMIRGAELLVRWRSSDGEIS-PGVFIPV 774 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQER-GIMLP-LSVNLSALQLMHPNMVADMLELLTR 523 E G ++T+G WV EE C+ W+ + G P +++N+S QL P ++ + E+L Sbjct: 775 AEMTGAIITIGRWVFEEGCKAERRWKAKFGEQAPYITINVSTRQLSEPLIIEEFQEILAE 834 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 P +ILE+TE+ + D A +L L G+RVA+DDFG GY+ L QL +K Sbjct: 835 TGADPTRIILEITETSLMADVSANREVLNRLATTGMRVAVDDFGTGYSSLAQLSRLK--- 891 Query: 584 IDVLKIDKMFVEGLP-GDSSMI--AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 ++ LKID+ FV GL G+ I +AI LA+SL L+++AEGVET+ QR+ + G + Sbjct: 892 VNTLKIDREFVLGLDEGEEGQIVVSAISRLAKSLKLKIVAEGVETDEQRNTIRSIGCDLI 951 Query: 641 QGFLFARPLPIE-IFE 655 QG+ + PL E +FE Sbjct: 952 QGYYYHPPLSEEALFE 967 >UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=Q6LQD7_PHOPR Length = 1053 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 132/423 (31%), Positives = 228/423 (53%), Gaps = 11/423 (2%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 +++LPN+ LL++ +EQ + K + + I + + L + +L+T+ ++ Sbjct: 623 LTELPNRLLLLQHIEQAITNAEEMKTSVVVFNIDLDYFKKINDSLGHDVGDKVLITIAKR 682 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 + L +LA++ G +FA++ TL ++++ + L IE L S+ Sbjct: 683 ITRSLRDEDVLARLGGDEFAILIQSDTSSQSIATLAERIINNICASLSIEEKSLSITASM 742 Query: 363 GVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+A++ + ++ L + A + A+ +G+N+ FF PQ + +RL ESD+ +L Sbjct: 743 GIAVYPENSVDSDALLKNSDIALYHAKDQGRNRYCFFTPQMGIESVQRLQLESDLRKSLG 802 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 Q+ + QP+V + K+ E LLR + +G P G+I +E GL+V VG ++ Sbjct: 803 TDQYTFFYQPKVNAKTHKVCGIEALLRWKNEEGQIQSPLGIIPILENSGLIVNVGETLIN 862 Query: 482 ESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 ++C LA WQ G+ L ++N+SA QL+H ++V + + +T P L LE+TES + Sbjct: 863 QACEQLAIWQSNGLDLHFALNISARQLLHSDIVDTVYKAVTMSGCNPHYLELEITESVVM 922 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP--G 599 D A L L GV++A+DDFG GY+ L ++ PI +LK+D+ FV+ LP Sbjct: 923 ADVKLAFDKLIKLEALGVKIAIDDFGTGYSS---LAYLSRFPIHILKVDREFVQDLPMNK 979 Query: 600 DSSMIA-AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 DS I +II LA +L + ++AEGVE E Q +L GV QG+ F +P+PI+ FE + Sbjct: 980 DSVTITRSIIELAHNLGMLVVAEGVENEGQIKFLTGIGVEEFQGYYFGKPMPIDEFELKF 1039 Query: 659 LEE 661 + + Sbjct: 1040 ITD 1042 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 133/415 (32%), Positives = 231/415 (55%), Gaps = 17/415 (4%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+AL +L Q ++R K AL+ + + + L ++LL + ++ Sbjct: 280 LTGLPNRALFTSLLSQAISRSDRRKNKLALLFLDLDRFKQVNDSLGHDVGDLLLQQVAQR 339 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWH-AITLGQQVLTIMSERLPIERIQLRPHCS 361 L+ ++++ G +F VI V H A L Q+++T + I ++ S Sbjct: 340 LQLATLEGGTVSRLGGDEFMVILEEVNSESHKAAKLAQKMITSLDAPFNILGREVLISTS 399 Query: 362 IGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+A+ G + L RA A + A+ +G+N QF+ + + A K + E+ + +AL Sbjct: 400 IGIALCSGSTQCIDSLLKRADMAMYRAKEQGRNNFQFYTAELQQQASKSIELENRLRHAL 459 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL-PDGLIDRIECCGLMVTVGHWV 479 + +F + QPQV+ SG+++ E LLR QPDG + P+ I E GL+V +G WV Sbjct: 460 QRKEFFLHYQPQVDTNSGQIIGLEALLR-WQPDGQALISPEEFIPVAEEAGLIVPIGEWV 518 Query: 480 LEESCRLLAAWQERGIMLP---LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 L E+C L W G++ P ++VNLS QL H ++++ + ++L ++P L LE+T Sbjct: 519 LREACSQLHRWHRSGLLSPTVKMAVNLSVRQLEHTSLLSTLTQILQETGLKPSQLELEIT 578 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 E+ + DP V IL + G++++LDDFG GY+ LR ++K LP+ VLKID+ F+ Sbjct: 579 ETAVMKDPDLVVNILHSIHAMGIQLSLDDFGTGYSSLR---YLKLLPLHVLKIDRSFIND 635 Query: 597 LPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARP 648 + G D +++ +II L+++L+L ++AEGVET+ Q D+L++ QG+ ++P Sbjct: 636 IGGKQRDQAILESIIYLSRNLDLTVVAEGVETQEQLDFLSRFNCHSIQGYYISKP 690 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 149/423 (35%), Positives = 231/423 (54%), Gaps = 19/423 (4%) Query: 246 PVSDLPNKALLMEMLEQVVA---RKQTTALMII----TCETLRDTAGVLKEAQREILLLT 298 P++ LPN+ALL + + Q +A R+ T A ++ +T+ D+ G L LL Sbjct: 320 PLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTINDSLGHLVGDH---LLQE 376 Query: 299 LVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRP 358 + ++LK+ + +A+ G +F V+ V A + +++ M + +P+ L Sbjct: 377 VAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVLNV 436 Query: 359 HCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 SIG+++F D + + L A A + ++ G+NQ QFF A +RL E+D+ Sbjct: 437 SFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQFQFFTADMNAHALERLALENDLH 496 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 A+E +F + QPQ E SG ++ AE LLR Q P P I E GL+V +G Sbjct: 497 RAVERGEFRLMFQPQFE-GSGSIIGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGT 555 Query: 478 WVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 WVLE +C+ + AW++ G+ + +SVN+SALQ N++ + LL I+PGTL LE+T Sbjct: 556 WVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELT 615 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 ES + D A ++ L+ GVR+A+DDFG GY+ L +++S PI LKID+ FV Sbjct: 616 ESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYS---SLSYLRSFPISKLKIDQSFVRD 672 Query: 597 LP--GDSSMI-AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 L GD+ I AII LA++LN+++IAEGVET Q +L QG F++P+ E Sbjct: 673 LSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEK 732 Query: 654 FEE 656 F E Sbjct: 733 FAE 735 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 146/439 (33%), Positives = 240/439 (54%), Gaps = 24/439 (5%) Query: 236 EEQNENAMRF-PVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEA 290 EE+ N F P++ LPN+ LL + L+Q +A ++ A++ I + ++ L Sbjct: 574 EEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFIDLDNFKNLNDTLGHD 633 Query: 291 QREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLP 350 ++LL + +L S + +A+I G +F V+ + + + + +Q ++ S+ L Sbjct: 634 IGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDLSD--NILDAAEQTESVGSKILA 691 Query: 351 IERI--QLRPHC-----SIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQ 402 + QL H SIG +F + + ++L +A A + A+ G+N ++FFDP+ Sbjct: 692 SLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQAKKAGRNTMRFFDPRM 751 Query: 403 MEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGL 462 ++ RL E ++ A+E QF ++ Q QV+ T L AE LLR P+ P Sbjct: 752 QQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPL-GAEALLRWMHPEHGLMAPAEF 810 Query: 463 IDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLEL 520 I E GL+V +G WVLE +C L AW++ + L LS+N+SA Q P+ V + Sbjct: 811 IPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAA 870 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 + Y I P L LE+TES +++ + + L+ GV +LDDFG GY+ L Q++K Sbjct: 871 VDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSL---QYLK 927 Query: 581 SLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 LP+D LKID+ F++ + DSS +++ II +AQS+ + +IAEGVETE QR L + G Sbjct: 928 RLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGC 987 Query: 638 GIAQGFLFARPLPIEIFEE 656 QG+LF++P+P+E FE+ Sbjct: 988 NHFQGYLFSKPVPVEQFEK 1006 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 151/457 (33%), Positives = 237/457 (51%), Gaps = 27/457 (5%) Query: 226 LNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCET 279 ++ + QR E+ + F ++ LPN+ LLM+ + +A R+Q AL+ I + Sbjct: 1046 IDTDIGQRKATEREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDN 1105 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHA 334 + L Q ++LL + +L + + +A++ G +F V+ G+ A Sbjct: 1106 FKTLNDTLGHDQGDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIEGLSTHPGELAMSA 1165 Query: 335 ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD---LTAEQLYSRAISAAFTARHKG 391 T+G+++L +++ ++ R SIGVA F GD T +L +A A + A+ G Sbjct: 1166 RTVGEKILAVLATPYVLQGYHYRSTPSIGVAPF-GDGRTSTVGELLKQADLAMYQAKTAG 1224 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 +N ++FFDP R E+D+ AL QF + QPQ++ G + E L+R Sbjct: 1225 RNTLRFFDPGMQAVVTARAELENDLRTALAREQFMLHYQPQIDR-RGSVTGVEALVRWPH 1283 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE---RGIMLPLSVNLSALQL 508 P P I E GL++ +G WVL +C LA WQ RG L ++VN+S+ Q Sbjct: 1284 PQRGMVSPGEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRG-HLSMAVNVSSRQF 1342 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 H V D++ +T L LE+TES ++D +A + LR+ GV +LDDFG Sbjct: 1343 HHEAFVEDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGT 1402 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVET 625 GY+ L ++K +P+D LKID+ FV L P D++++ II L++SL L +IAEGVET Sbjct: 1403 GYS---SLSYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVET 1459 Query: 626 EAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 QR L +AG QG+ F+RPLP E E +L +K Sbjct: 1460 AEQRTRLEQAGCRAYQGYFFSRPLP-ETALEDFLVQK 1495 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 132/418 (31%), Positives = 227/418 (54%), Gaps = 11/418 (2%) Query: 247 VSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV---EKL 303 +++LPN+ L L Q +AR +++ L + + REI TL E+ Sbjct: 344 LTNLPNRVLFRNRLNQAIARNHEGNHVVLLFIGLDRFTKINESLGREIGDNTLTQAAERF 403 Query: 304 KSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIG 363 + L+ ILA++ G +FAVI + P A +++L + E + ++ ++ SIG Sbjct: 404 HNCLAENQILARLGGDEFAVIMEDCRHPQDAAKTAKKLLEQLIEPIHVQPNEIYLTASIG 463 Query: 364 VAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALEN 422 ++ + D + + L S A A A+ +GK++ QFF+ + + ++ E+D+ A+ Sbjct: 464 ISSYPQDGESPKTLMSHADIAMTRAKSEGKDRYQFFEREMTQTTKRVFELENDLRKAVAR 523 Query: 423 HQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEE 482 ++ ++ QPQ+++ S ++ E L+R Q P P I E GL+V++G WVL + Sbjct: 524 NELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPADFIPLAEETGLIVSIGEWVLRQ 583 Query: 483 SCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 +C+ +A W ++G+ + ++VNLS LQ H +V ++ + L I P L LEVTES + Sbjct: 584 ACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAKTLKETGINPACLELEVTESMIM 643 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG-- 599 D + A + L G +A+DDFG GY+ L +++ P+ LKIDK F+E + Sbjct: 644 DSIDKSTATMIELTELGAGLAIDDFGTGYSS---LSYLRYFPLTKLKIDKSFIERVTSDE 700 Query: 600 -DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D+++ ++I LA SLNL+++AEG+E E Q +L K QGFLF+RP+P E E+ Sbjct: 701 HDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQGFLFSRPVPAEDMEQ 758 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 158/464 (34%), Positives = 241/464 (51%), Gaps = 32/464 (6%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVV----ARKQTTA 271 G + NQ + R E+ + + F ++ LPN+ L+ + LE + RK A Sbjct: 358 GQTIGIVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHGA 417 Query: 272 LMIITCET---LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI---- 324 L++I + L DT G E E LLL + ++LK+ + A++ G +F VI Sbjct: 418 LLLIDLDNFKFLNDTHG--HEVGDE-LLLEVAKRLKTCIRQGDTAARLGGDEFVVILEDI 474 Query: 325 ---ANG-VQEPWHAITLGQQVLTIMSERLPIERIQLRPHC--SIGVAMFYGDL-TAEQLY 377 NG +Q A + Q+ S P ER+ + C SIG+A+F + TA++L Sbjct: 475 DGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELL 534 Query: 378 SRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTS 437 RA +A + A+ G+N ++FFDP+ A R E+++ A++ QF + Q Q++ S Sbjct: 535 RRADTAMYQAKAAGRNTLRFFDPEMQAAVTHRAALETELRKAIDEQQFHLCFQVQMDQ-S 593 Query: 438 GKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGI 495 G+ E LLR + P P I E GL+V +G WVL +CR LAAW Q Sbjct: 594 GRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETS 653 Query: 496 MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 L L+VN+SA Q + +LL + L LE+TES ++D A + + L+ Sbjct: 654 GLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELK 713 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQ 612 G+R +LDDFG GY+ L ++K LP++ LKID+ FV + P D+++ I+ L Sbjct: 714 QLGIRFSLDDFGTGYS---SLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGN 770 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 L L++IAEGVET+AQ +LA G QG+LF RPLP+ FE+ Sbjct: 771 ILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQ 814 >UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYF3_METFK Length = 747 Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 143/441 (32%), Positives = 238/441 (53%), Gaps = 20/441 (4%) Query: 232 QRHYEEQNEN-AMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGV 286 +R E + N A ++ LPN+ LL++ L+Q +A + A++ I + + Sbjct: 302 RRKVESEIRNLAFYDALTTLPNRRLLLDRLQQAIAASVRHGRHGAVLFIDLDNFKALNDS 361 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIA-----NGVQEPWHAITLGQQV 341 ++LL+ + +L+ + +A++ G +F ++ N Q + Q+V Sbjct: 362 RGHDIGDLLLVEVARRLRQCVRNEDTVARLGGDEFVIVLEDLSLNLEQAIAQTRQVAQKV 421 Query: 342 LTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDP 400 L I++ + I+ SIG+ +F G+ + E+L R+ +A + A+ G+N ++FFDP Sbjct: 422 LEIINHPYQLGEIEHHNSSSIGIVLFNGNFVSMEELLKRSDTAMYEAKAAGRNTLRFFDP 481 Query: 401 QQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPD 460 A ++R+ E + A+ Q ++ Q QV+ K+ AE+LLR Q PD P Sbjct: 482 AMQAALERRVDMELQLRLAIVQKQLRLFCQVQVD-AERKVFGAEILLRWQHPDHGLLAPK 540 Query: 461 GLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GI-MLPLSVNLSALQLMHPNMVADML 518 + E GL+V++GHWVL +C L W+ R G L L+VN+SA Q H + V ++ Sbjct: 541 EFVGIAEDSGLIVSIGHWVLYNACLQLKDWEARPGFDSLQLAVNVSARQFRHADFVDEVR 600 Query: 519 ELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQH 578 ++L P L LE+TES +D+ AVA + LR GVR ++DDFG GY+ L + Sbjct: 601 KILQSTGADPSLLKLELTESVVLDNIADAVAKMNALRELGVRFSMDDFGTGYSS---LAY 657 Query: 579 MKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKA 635 +K LP+ +KID+ FV + D+S M+ AI+ ++ +L L++IAEGVETE Q + L Sbjct: 658 LKRLPLSQVKIDRSFVREIAEDASDAAMVQAILAMSNTLGLKVIAEGVETEVQFELLQSY 717 Query: 636 GVGIAQGFLFARPLPIEIFEE 656 G QG+LFA+P+ I+ FE+ Sbjct: 718 GCRFFQGYLFAKPMLIQDFEQ 738 >UniRef50_B1KF16 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KF16_SHEWM Length = 583 Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 134/435 (30%), Positives = 237/435 (54%), Gaps = 21/435 (4%) Query: 240 ENAMRF-----PVSDLPNKALLMEMLEQVVAR--KQTTALMIITCETLRDTAGVLKEAQR 292 EN + F ++ + N+ LLME L Q + + +AL+ I + + Sbjct: 149 ENKITFMAYHDALTGVANRRLLMEHLAQELTKPCGHCSALLYIDLDNFKQVNDHYGHTVG 208 Query: 293 EILLLTLVEKLKSVLSPRM-ILAQISGYDFAVIANGVQEPWHAIT-----LGQQVLTIMS 346 ++LL + + L ++A++ G +F + + + E +T + +++ +S Sbjct: 209 DLLLCEVSDVLSEYAQDEEDLVARMGGDEFILFLSNLGENSALVTQKLVQITEKIRVQLS 268 Query: 347 ERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 E + + +++++ SIGV + ++ ++ A +A + +++ GKNQ++F+D + ++ Sbjct: 269 EPVLLGKLKIQITSSIGVVTLDHATMSHSDIFKYADAALYHSKNTGKNQVRFYDEELEQS 328 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 ++R E ++ A+ N +F ++ QPQV+ ++ AEVLLR Q P PD I Sbjct: 329 ERRRHQLEDELSQAITNEEFLLYYQPQVDAEGTTILKAEVLLRWQHPRHGIVNPDEFIPH 388 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRY 524 +E GL++ VG W+LEESCR L W G L LS+N+SA Q HP+ + + L ++ Sbjct: 389 LEEYGLIIPVGKWILEESCRQLKVWHNAGKHELCLSINVSANQFKHPDFIEFIEICLIKH 448 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 +I + LE+TE I D + + + L+ G+R+ALDDFG GY+ L L+H LPI Sbjct: 449 QISGEQIELELTEGVAIHDIPSTIKKMDRLQELGIRIALDDFGTGYSSLSYLKH---LPI 505 Query: 585 DVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 + LKID+ FV+GLP D++++ +++A L L ++AEGVE Q +L K + Q Sbjct: 506 NTLKIDQSFVQGLPHDGYDAAIVETTMVMAHHLGLTVVAEGVENRVQLAFLKKQQCHLYQ 565 Query: 642 GFLFARPLPIEIFEE 656 GFLF++PL ++ F E Sbjct: 566 GFLFSQPLNVDRFSE 580 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 134/414 (32%), Positives = 226/414 (54%), Gaps = 14/414 (3%) Query: 247 VSDLPNKALLMEMLEQVV--ARKQTT--ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN++L ++ + Q + AR+ + AL+ I + + L + LL + ++ Sbjct: 283 LTGLPNRSLFLDRVTQSINHARRNESRLALIFIDLDKFKLINDTLGHNAGDDLLRIMSKR 342 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+ LA+ G +F ++ + ++ L ++++ +S + + CS+ Sbjct: 343 LQECTRNCDTLARFGGDEFVLLVDNLESEADLTHLAARLISSVSAPVLLLGQSHSITCSL 402 Query: 363 GVAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 G++ F GD E L A A + A+ G+N QFF Q + +RL ES + AL Sbjct: 403 GISSFPEDGD-NVEVLMRHADIAMYRAKESGRNSYQFFTHQMQDRLNERLKLESSLKQAL 461 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 EN +F + QPQV++++GK++ E L+R Q P P I E L+ +G WV+ Sbjct: 462 ENDEFVLHYQPQVDLSTGKIIGLEALIRWQSPTLGLVPPGDFIPAAEEGRLISAIGEWVI 521 Query: 481 EESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 C+ L +W+ +G+ ++P+++N+SALQ M + + L Y ++P L LE+TES Sbjct: 522 FAVCKRLQSWRRQGLKIVPVAINISALQFMEQKTEELVKQALNEYMVEPKYLELELTESL 581 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 + DP ++++++ L++ GV +++DDFG GY+ L ++K P++ LKIDK FV GL Sbjct: 582 SMLDPVTSISLMQRLKDIGVSLSIDDFGTGYS---NLSYLKRFPVNKLKIDKSFVSGLTN 638 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 P D S++ AII ++QSL L+ IAEG ET Q LA QGF F+RPLP Sbjct: 639 NPDDYSIVKAIIRMSQSLGLKTIAEGAETAGQIALLAAENCDAIQGFYFSRPLP 692 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 149/447 (33%), Positives = 232/447 (51%), Gaps = 23/447 (5%) Query: 226 LNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQV--VARKQTTALMIITCETLR 281 +N + +R E + + F P++ LPN+ LL + L+ V Q AL++I + + Sbjct: 599 INTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQVRHGQVGALLLIDLDNFK 658 Query: 282 DTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ-EPWHAITL--- 337 L A ++LL + ++L++ L LA++ G +F ++ G+ P A +L Sbjct: 659 TLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIVLEGLSASPGDAGSLATR 718 Query: 338 -GQQVLTIMSERLPIERIQLRPHC--SIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKN 393 G+++L + P + HC SIG+ +F T ++L RA A + A+ G+N Sbjct: 719 VGEKILASFAR--PFQLADYVHHCTASIGITLFNDRPTTLDELRKRADLAMYQAKAHGRN 776 Query: 394 QIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPD 453 ++FFDP R E D+ AL F + Q QV+ G + AE LLR Q P Sbjct: 777 ALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVD-ARGCVSGAEALLRWQHPQ 835 Query: 454 GSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHP 511 W P I E GL++ +G WVL+ +C L AW + M L L+VN+SA Q Sbjct: 836 RGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFRQA 895 Query: 512 NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYA 571 + A +L + R P L LE+TES +D+ + + L+ G+ +LDDFG GY+ Sbjct: 896 DFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYS 955 Query: 572 GLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQ 628 L ++K LP+D +KID+ FV + D+S+ +I+ L QSLNL+++AEGVET+AQ Sbjct: 956 ---SLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQ 1012 Query: 629 RDWLAKAGVGIAQGFLFARPLPIEIFE 655 +LA+ G QG+LF RP P FE Sbjct: 1013 HAFLAEHGCQAYQGYLFNRPQPARQFE 1039 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 137/429 (31%), Positives = 227/429 (52%), Gaps = 19/429 (4%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L ++ LE +A T A++ I + + + ++LL + + Sbjct: 521 LTSLPNRQLFIDRLEHTLAYSARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQQVAMR 580 Query: 303 LKSVLSPRMILAQISGYDFAVI-----ANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + L +A+ G +F V+ N + A + +++L + + Sbjct: 581 IAGCLRESDTVARFGGDEFVVLLHELSGNHQEAAAQARLVSEKILISFAHPFQFSGYEHH 640 Query: 358 PHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIGV +F T +++ RA A + ++ G+N I+FFDP+ R+ E D+ Sbjct: 641 TSASIGVTLFDQQPTTVDEILKRADLAMYQSKAAGRNVIRFFDPEMQALIADRVEMEEDL 700 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 N L N +F + QPQV+ G+L+ AE LLR + P P I E GL+V+VG Sbjct: 701 RNGLRNDEFFLCYQPQVD-NQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGLIVSVG 759 Query: 477 HWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILE 534 +WV+ +C+ L W ++ + L L+VN+SA QL + V ++E+L P L LE Sbjct: 760 NWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPKRLKLE 819 Query: 535 VTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV 594 +TES +++ +A + L+N GV ++DDFG+GY+ L ++K LP+D LKID+ FV Sbjct: 820 LTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSSL---SYLKLLPLDQLKIDQSFV 876 Query: 595 EGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 + P D+ + II L +SLNLQ+IAEGVET +QR++L G QG+LF++P+P Sbjct: 877 RDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPA 936 Query: 652 EIFEESYLE 660 + FE ++ Sbjct: 937 DEFERDVVQ 945 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 140/422 (33%), Positives = 223/422 (52%), Gaps = 17/422 (4%) Query: 247 VSDLPNKALLMEMLEQVVA------RKQTTALMIITCETLRDTAGVLKEAQREILLLTLV 300 ++DLPN++ L L+Q +A ++ A+M + + ++ L + LLL + Sbjct: 976 LTDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVA 1035 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 +L+S + ++A++ G +F V+ G + A + ++L +S IE L Sbjct: 1036 ARLRSSVRDSDVVARLGGDEFVVVLTGA-DALAAERVAGKILKALSRAYQIEGHALHSTS 1094 Query: 361 SIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 SIG+A+F D + E L A +A + A+ G+N +QFF EAA R E D+ A Sbjct: 1095 SIGIAVFPADGESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLA 1154 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 L+ QF + QPQV+ ++ + E LLR Q P P + E GL+V +G WV Sbjct: 1155 LQQKQFVLHYQPQVDAQR-RVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWV 1213 Query: 480 LEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 LE +C + AW R L ++VN+SA Q P+ V + + + P L LE+TE Sbjct: 1214 LETACAQIKAWSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTE 1273 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 S +D+ + + ++ GV ++DDFG GY+ L ++ LP+D LKID+ FV L Sbjct: 1274 SLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYS---SLSYLTRLPLDQLKIDRAFVCRL 1330 Query: 598 P---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 P D+ + I+ + +SL L+++AEGVETEAQR +L G QGFLF+RPL ++ F Sbjct: 1331 PENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAF 1390 Query: 655 EE 656 E+ Sbjct: 1391 ED 1392 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 147/433 (33%), Positives = 233/433 (53%), Gaps = 22/433 (5%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLL 297 A P++ LPN+ +++ L+ +A + AL+ I + + L + LL Sbjct: 279 ATSDPLTGLPNRRFMLDRLKHALASSSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQ 338 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP-----WHAITLGQQVLTIMSERLPIE 352 + +L++ + +A++ G +F V+ + E +G+++L +++ + Sbjct: 339 QVAHRLETCVREGDTVARLGGDEFVVMLEDLSEKDLEAAAQTEAVGEKILAALNQPYQLG 398 Query: 353 RIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLT 411 + + R SIG +F + ++L +A A + A+ G+N ++FFDPQ E R T Sbjct: 399 KHEYRNTPSIGATLFNDHQQSLDELLKQADIAMYQAKRAGRNALRFFDPQMQETINSRAT 458 Query: 412 EESDILNALENHQFAIWLQPQV----EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 E+++ ALE HQF ++ Q QV E S + AE L+R P+ P I E Sbjct: 459 LENELRKALELHQFYLFYQVQVDSVQEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAE 518 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYR 525 GL+V +G WVL+ +C L WQ + L L+VN+SA Q P+ VA + + R+ Sbjct: 519 ETGLIVPIGLWVLDTACAQLKTWQHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHG 578 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 I P L LE+TES +++ +A + LR G+R +LDDFG GY+ LQ++K LP+D Sbjct: 579 IDPKLLKLELTESLLLENIQDTIATMNALREIGIRFSLDDFGTGYSS---LQYLKQLPLD 635 Query: 586 VLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ F+ L DSS ++ II +AQSLNL +IAEGVETEAQR L + G QG Sbjct: 636 QLKIDQSFICDLVSDSSDRAIVRTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHHQG 695 Query: 643 FLFARPLPIEIFE 655 +LF++P+PI FE Sbjct: 696 YLFSKPVPINQFE 708 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 154/475 (32%), Positives = 262/475 (55%), Gaps = 27/475 (5%) Query: 206 LALPRLHQDDEIGMLVRSYNL---NQQLL-----QRHYEEQNEN-AMRFPVSDLPNKALL 256 +AL R H+D E+ + R+ L N LL ++ EE+ ++ A+ ++ LPN+ LL Sbjct: 459 VALARAHEDLELRVKERTKELAKANMDLLVEINERKMAEERVKHMALHDALTGLPNRLLL 518 Query: 257 MEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 E LE ++ ++ A++ I + + L + + LL+ + +L V+ Sbjct: 519 EERLENALSDAKSHQWQLAVLFIDLDRFKLVNDTLGHHEGDQLLVEVANRLHQVIGANDT 578 Query: 313 LAQISGYDFAVIAN---GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG 369 +A++ G +F ++ N G E I QQ + +L ++ + + P SIGVA++ Sbjct: 579 VARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFK-PAVKLALQDMFVTP--SIGVAIYPE 635 Query: 370 D-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIW 428 D T QL A +A + A+ G+N Q+F+ ++ ++R++ E+ + AL+ QF ++ Sbjct: 636 DGETPVQLMKNADAAMYHAKASGRNCAQYFNRSLDDSLKERISLENALNQALKLGQFELY 695 Query: 429 LQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLA 488 QPQ+++ S +++ AE L+R P+ PD I E GL+V +G WVL ++ LA Sbjct: 696 YQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLA 755 Query: 489 AWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 W+++G L +SVNLSALQ+ + ++ +++ Y + L LE+TES + + Sbjct: 756 QWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLELTESMIMRNAEET 815 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL--PGDSSMIA 605 +A L + N G+++++DDFG GY+ L ++K P+D LKID+ FV+ + D +MI Sbjct: 816 IAALDKIHNLGIQISVDDFGTGYSS---LSYLKRFPLDKLKIDRSFVQDITVDTDDAMIC 872 Query: 606 -AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 II +A +LNLQ+IAEGVET AQ + L G QG+LFA+PLP+E E L Sbjct: 873 KTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEHLL 927 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 128/417 (30%), Positives = 225/417 (53%), Gaps = 16/417 (3%) Query: 246 PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++DLPN++L L+Q V + + A++ + +D + LL + + Sbjct: 862 PLTDLPNRSLFCTHLDQAVKHAERKHHSFAVLCFDLDHFKDVNDSFGHLVGDALLRKIAD 921 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIER--IQLRPH 359 +L+S L +LA++ G +F ++ V + + +++L + + + + ++++ Sbjct: 922 RLRSCLRESDMLARLGGDEFVLLLEDVADSHRVTMMAEEILHQLQQPICLTETDLEVQVS 981 Query: 360 CSIGVAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 S+G+A++ +G A +L RA SA + A+ G+ + +++ + E AQ+R+ + Sbjct: 982 VSVGIAVYPEHGR-DALELLQRADSALYRAKQHGRARFAYYNEEMTEQAQERVQLSFHLR 1040 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 ALE +FA++ QPQV++ +G++V AE L+R P+ PD I E G + ++G Sbjct: 1041 QALEKKEFAVYYQPQVDLGTGQIVGAEALMRWNSPELGLVTPDRFIPLAEEIGCICSMGT 1100 Query: 478 WVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 W+L + C AW + G L L+VNLSA+Q ++ + E L L LEVT Sbjct: 1101 WILRQVCEQGKAWLDAGYPPLTLAVNLSAVQFAEEDIACRLKETLQETGYPAEYLELEVT 1160 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 ES + + +L+ L GVR+ALDDFG GY+ L ++K P+ +LK+DK F++ Sbjct: 1161 ESTLMHKEQQTIDLLKSLNELGVRLALDDFGTGYSS---LAYLKYFPLHLLKVDKSFIDD 1217 Query: 597 LPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 LP D++ M+ AI+ + L ++AEGVET AQRD LA+ G QG+ + P+P Sbjct: 1218 LPADANDCKMVTAIVQMGHGLGFDLLAEGVETVAQRDCLAQLGCDYYQGYYCSPPVP 1274 >UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL67_THISH Length = 685 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 141/425 (33%), Positives = 222/425 (52%), Gaps = 20/425 (4%) Query: 246 PVSDLPNKALLMEMLEQVVARKQTTALMI----ITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN+ L ++ L+Q +A+ Q T + I + ++ L ++LL Sbjct: 255 PLTKLPNRRLFLDRLDQQIAKCQRTGAALALLLIDLDEFKEVNDTLGHDVGDVLLQEAAR 314 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 ++ + +A++ G +F VI + + H + Q++++ ++E + S Sbjct: 315 RISGCIRDTDTVARLGGDEFTVILSDLTGKAHVEEIAQKLISRVAEPYYLREGVAHISAS 374 Query: 362 IGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+ ++ GD +L A A ++A+ G+N+ +F EAAQKRL ++ A+ Sbjct: 375 IGITLYPGDAEDMGELMKHADQAMYSAKRLGRNRFCYFTHALQEAAQKRLRLSRELRQAV 434 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 QF QP VE+ SG++ AE LLR P+ P I E GL+ VG WV Sbjct: 435 NQGQFEAHFQPIVELASGRIQKAEALLRWHHPERGLVGPAEFIPLAEDTGLIEGVGDWVF 494 Query: 481 EESCRLLAAWQER-GIMLPLSVNLSALQLMHPNM--VADMLELLTRYRIQPGTLILEVTE 537 E+ R W++R G + +SVN+S LQ V L L ++ +++E+TE Sbjct: 495 REAVRRARVWRDRFGTDIQVSVNMSPLQFRSEGAERVESWLYHLEEMGVRGEQIVIEITE 554 Query: 538 SRRIDDPHAAVAILRPL---RNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV 594 + + HA + R L R+AG+++A+DDFG GY L ++K PID LKID+ FV Sbjct: 555 NLLL---HAHDEVTRQLFRFRDAGIQIAIDDFGTGYC---TLSYLKQFPIDYLKIDRSFV 608 Query: 595 EGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 L P D ++ AII++A L L++IAEGVETE QR L+ AG AQG+LFAR LP Sbjct: 609 RNLENDPNDVALSKAIIVMAHELGLKVIAEGVETEGQRRLLSDAGCDFAQGYLFARALPA 668 Query: 652 EIFEE 656 E FE+ Sbjct: 669 EDFED 673 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 137/439 (31%), Positives = 229/439 (52%), Gaps = 13/439 (2%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA--RKQTTALMII--TCETLRDTAGV 286 ++R E+ A +++LPN+ L + L VA R+ T L +I + + Sbjct: 469 IKRSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDS 528 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL + E+L S A++ G +F ++ +++P L +++L + Sbjct: 529 LGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQLE 588 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + + S+GV +F D T E L A A + A+ GKN Q F + Sbjct: 589 LPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEAGKNGYQLFTAAMQQT 648 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 +R+ E+ + +AL ++F ++ QPQV++ S ++ AE L+R Q+PDG PD I Sbjct: 649 IMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEALIRWQKPDGQLVYPDEFIPI 708 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPN-MVADMLELLTR 523 E CGL+ + HWVL+ +CR W+E+ G +SVNLS+ Q +V + +L + Sbjct: 709 AEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFAKDQELVQRVKNVLNK 768 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 + L LEVTE+ + D +A+AI+ L GV +A+DDFG GY+ L ++K+ P Sbjct: 769 TGLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGTGYSS---LSYVKNFP 825 Query: 584 IDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 LKID+ FV+ +PGDS ++ A+II L ++LN+++IAEGVE + Q D+L + Sbjct: 826 ARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEEQTQIDFLKQHRCQQV 885 Query: 641 QGFLFARPLPIEIFEESYL 659 QG+ + +P E F + + Sbjct: 886 QGYFYGKPCAAEFFSQQFF 904 >UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBN5_METSD Length = 782 Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 143/423 (33%), Positives = 224/423 (52%), Gaps = 22/423 (5%) Query: 247 VSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L + L +A ++ I + ++ L + LL+ +VE+ Sbjct: 350 LTGLPNRLLFQDRLTHALALSARNNNRVGMLFIDIDHFKNINDSLGHVIGDELLVAIVER 409 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIE-RIQLRPHCS 361 LK + + A++ G +F ++ +Q A T+ +L + + ++ S Sbjct: 410 LKLRIREQDTFARLGGDEFVLLIEQLQNASEAATIASNLLEALKTPFHLSGNCEVVISAS 469 Query: 362 IGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+++ D A QL A SA + A+ G+N+ QF+ + + AQ+RL ES + A+ Sbjct: 470 IGISVCPEDTQDATQLIRNADSAMYRAKDTGRNRYQFYTEELTQRAQERLMTESRLRQAI 529 Query: 421 ENHQFAIWLQPQVEMTSGK------LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 + F + QP T G+ + S E L+R QQ DGS PD I E GL++ Sbjct: 530 RDKAFVLHYQPIY--TKGEDGGAPSIFSCECLIRWQQDDGSLIYPDLFIPCAEETGLIIP 587 Query: 475 VGHWVLEESCRLLAAWQER--GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 +G WVL+ +C LA W R L ++VN+SA N V + E+L R+ I P LI Sbjct: 588 IGEWVLDHACAQLAEWDARLPDNTLSMAVNISARHFCDANFVMTVHEVLKRHAIAPARLI 647 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 +E+TE+ +D A+ L L GVR+ALDDFG G++ L +L K+LPI LKID+ Sbjct: 648 IEITENAVMDRMDIAIPTLETLVRTGVRIALDDFGTGHSSLAKL---KTLPIHALKIDRE 704 Query: 593 FVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 FV+ +P D + A+II +AQ L+LQ +AEGVET+ Q D+LA+AG QG+L +RP+ Sbjct: 705 FVKDIPDSTDDMQLAASIIRMAQGLHLQTVAEGVETQEQYDFLAQAGCDKFQGYLLSRPV 764 Query: 650 PIE 652 E Sbjct: 765 TAE 767 >UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Halorhodospira halophila SL1 RepID=A1WT40_HALHL Length = 836 Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 147/433 (33%), Positives = 226/433 (52%), Gaps = 14/433 (3%) Query: 233 RHYEEQNENAMRF-PVSDLPNKALLMEMLEQ-VVARKQTTALMIITCETLRDTAGV---L 287 + Y+ Q E M P++ LPN+ + + L Q +VA ++ T + L D + L Sbjct: 382 KEYQSQLERIMHSDPLTGLPNRLVFQDRLHQALVANQKQTGFFAVLSLDLNDLKAINYSL 441 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 A + +L L E+L++ L +A++ G +F V+ GV++ + + + + E Sbjct: 442 GHAVGDAILQQLAERLRNALCEEHTVARLGGDEFGVLLLGVRDASEVAAITEDLSKGLDE 501 Query: 348 RLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 I + SIG+A++ D A L+ +A +A A+ +G + +FF E A Sbjct: 502 PFQIADRAIPIAASIGIAVYPEQDAGAADLFQQANAAMHQAKREGVS-YRFFSEDLTEQA 560 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 ++R+ S++ AL + QPQ++++SG V E L+R P W P+ I Sbjct: 561 RERVQLGSELREALNQGALELHYQPQIDLSSGAWVGLEALIRWHHPVQGWISPERFIPVA 620 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+ T+G WVLE++CR W + G L VN +A +L P++ +L L R R Sbjct: 621 ERIGLVTTLGAWVLEQACRQGRIWLDAGFEFGRLGVNFAAPELSAPDLAERVLAALDRAR 680 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + L +EVTE +D + L+ LRN GV VALDDFG GY+ L +++ LP+D Sbjct: 681 LPARYLEIEVTERLLVDPDPEVIQQLQLLRNHGVTVALDDFGTGYSA---LSYLRDLPVD 737 Query: 586 VLKIDKMFVEGLPGDSSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV+GLP D +A AI L ++L +IAEGVET AQR+ L G AQG Sbjct: 738 RLKIDRSFVDGLPDDERTLAIAQAIAGLGRNLGFTIIAEGVETPAQREALIGIGCPWAQG 797 Query: 643 FLFARPLPIEIFE 655 FLF RP P+ E Sbjct: 798 FLFGRPAPVAGIE 810 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 153/479 (31%), Positives = 250/479 (52%), Gaps = 18/479 (3%) Query: 189 IARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFP 246 ++RE + L H++A P + + I M + +L ++R E + A Sbjct: 292 LSRERKVLGTFALYAHEVATPCEQEQELIAM---AAHLAGIAIERKRAEDRISFLAHHDA 348 Query: 247 VSDLPNKALLME----MLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L E MLE++ R Q L + + + L A + LL + + Sbjct: 349 LTGLPNRVLFEEQVDGMLEEIRERDQCAVLAFLDLDNFKLINDSLGHAAGDELLKAVAGR 408 Query: 303 LKSVLSPRMILAQISGYDFAVIANGV-QEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +++ + + ++ G +F ++ NG+ +E ++ + + + ++ L ++ L+ CS Sbjct: 409 MRASVRKADFVVRVGGDEFIILLNGLPKERDIVLSRLEDIRSAIAMPLQLQGRSLQVSCS 468 Query: 362 IGVAMFYG-DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 +GVA F TA +L + A A + A+ G++ IQ F + A +RL + ++ AL Sbjct: 469 MGVACFPNQGRTAGELLANADMAMYRAKELGRDNIQVFTEEMAARAHERLQWQEELREAL 528 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 +F + QPQ+ + +G++ +AE LLR P P I E GL+V +G W L Sbjct: 529 AGEEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWAL 588 Query: 481 EESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +CR L AWQ+ G+ L +SVN+SA Q N + + E+L ++ L LE+TES Sbjct: 589 RAACRQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKETGLEARYLELELTESL 648 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP- 598 + D A+A + L GV +A+DDFG GY+ L L K P+ LKID+ FV +P Sbjct: 649 IMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSAL---KRFPVRRLKIDRSFVTDIPL 705 Query: 599 --GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D ++ +AII LAQ L L++IAEGVE+EAQ ++L KAG QG+ F+RPL E FE Sbjct: 706 DADDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFE 764 >UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Chroococcales RepID=Q31P31_SYNE7 Length = 1047 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 139/464 (29%), Positives = 248/464 (53%), Gaps = 26/464 (5%) Query: 214 DDE---IGMLVRSYNLNQQLLQRHYEEQNE---NAMRFPVSDLPNKALLMEMLEQVVARK 267 DD+ IG+ S ++ Q++ E QN+ +A ++ L N+ LL+E LE + R Sbjct: 590 DDQGVVIGLQTTSRDVTQRI-----EIQNQLQYDACHDSLTGLANRNLLIERLELSLKRS 644 Query: 268 Q-----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFA 322 + A++ + + + L + LL+++ +KL+S++ + A++ G +F Sbjct: 645 KRLQNYKYAVLFLDLDRFKVINDSLGHITGDQLLVSIAQKLQSIIRSHDLAARLGGDEFV 704 Query: 323 VIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAI 381 V+ +Q I + +++L + L +E + SIG+ + +A QL A Sbjct: 705 VLVEDIQTFDEPIKVAERILAAIQVPLELEERSIYTSTSIGIVFGSHEYESATQLLRDAD 764 Query: 382 SAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLV 441 +A + A+ +G+ + + FD A RL E+D+ A+ +F ++ QP +++ +GK+ Sbjct: 765 TAMYRAKSRGRARYEVFDSAMHSQALARLHLENDLRQAIARQEFVLYYQPIIQLQTGKIT 824 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ---ERGIMLP 498 E L+R Q P LP LI E GL+ ++ +WVL ++CR L+ WQ + L Sbjct: 825 GFEALIRWQHPTEGIKLPIDLIPIAEETGLITSIDYWVLNQACRQLSEWQASYSQAADLS 884 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 +SVNLSA L H +++ ++ +L +I+PG+L LE+TES I++ + +L + G Sbjct: 885 MSVNLSAQNLQHDHLMDEIQSVLQATKIKPGSLTLEITESMLIENTDQTIQLLAAINEQG 944 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLN 615 + +++DDFG GY+ L ++ LP++ LK+D FV + +S+ ++ II L L Sbjct: 945 IEISIDDFGTGYSS---LSYLHKLPVNNLKVDGSFVRKITTESTNYQIVNTIIALNNQLG 1001 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 L+ IAEG+ET Q D L++ G QG+LFARPL + E+ +L Sbjct: 1002 LKAIAEGIETHEQLDLLSQLGYQYGQGYLFARPLNAKDVEQLFL 1045 >UniRef50_C6DFX5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=Enterobacteriaceae RepID=C6DFX5_PECCP Length = 722 Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 133/453 (29%), Positives = 241/453 (53%), Gaps = 17/453 (3%) Query: 217 IGMLVRSYNLNQQLLQRHYEEQNENAMRF-------PVSDLPNKALLMEMLEQVVARKQT 269 + M + N++ + R E+ N R P++ L N+ LL LE + + Sbjct: 264 VSMWEDNDNISYGAILRDITERRRNEERLFLLAHLDPLTGLANRTLLTSNLETALKNEPA 323 Query: 270 TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ 329 +M++ + +D L + + +L+ + +K+K+ + ++A++ G +FA++ G+ Sbjct: 324 VCIMMVDLDGFKDVNDSLGHSSGDNILVHVAKKIKATVRSGDVVARMGGDEFALLFPGLN 383 Query: 330 EPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF--YGDLTAEQLYSRAISAAFTA 387 + A + +Q++ +S+ + I+ Q+ SIG ++ YG LT + L + A A + A Sbjct: 384 DKKVAGKIAEQIIHEISQAMIIDDHQINISASIGAVLYPEYG-LTVQDLLTSADLALYQA 442 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + +G+N +FF + +E Q + + + + A E H+F ++ QPQV++ + ++V AE LL Sbjct: 443 KSEGRNCYRFFTRELLEVFQAKHAFQLEFVRAYEQHEFEMFYQPQVKLATNEIVGAEALL 502 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW-QERGIMLPLSVNLSAL 506 R + P+ P + +E VG W++E +CR A W +E +S+NL + Sbjct: 503 RWRHPERGLLSPAAFLTALENGPWAERVGDWIVETACRQAAEWCRESDRYFRISINLFSA 562 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q + ++++L R +QP +L LE+TE+ + + L+ LR+AG+ +A DD+ Sbjct: 563 QFRTGMLAQKIMDILARTGLQPSSLELEITENIILRYDENMLQPLKALRDAGIGIAFDDY 622 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GYA L L K+ P+ LKID+ FV + P D++++ AI+ L +S L +IAEGV Sbjct: 623 GTGYASLSML---KNYPVTRLKIDQTFVRTMCESPPDAAIVRAILYLGKSFGLGVIAEGV 679 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 ET Q + L G AQG+LF P+P E F + Sbjct: 680 ETLEQSERLRGKGCEEAQGYLFGHPMPAEEFTQ 712 >UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A3Q8W6_SHELP Length = 1094 Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 140/454 (30%), Positives = 243/454 (53%), Gaps = 16/454 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKAL----LMEMLEQVVARKQ 268 D+ G +V+ L + R EQ+ + +++LPN+ L L +ML+ R Sbjct: 629 DDKGRVVQHIGLFLDISNRKKYEQDIWYKSNYDALTNLPNRQLYTSRLSQMLQLAEQRCC 688 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 + A++ I + + + A + LL +L+++L +A++SG +F V+ Sbjct: 689 SVAVLFIDLDRFKYINDIYGHAVGDELLQVAAARLEALLEQHDFVARLSGDEFVVVMGHT 748 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSR-AISAAFTA 387 + Q +L +S I R +L S+G++ + + T+ ++ +R A +A + A Sbjct: 749 KHQGEIEQRAQNILQHLSSPFGINRNELLISASVGISCYPSNGTSVEVLTRNAETAMYQA 808 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G+N +F P R+T E + +A+ H+F + QP V+ +SG+ V+ E LL Sbjct: 809 KQDGRNCFGYFSPDMNNNMLARITLEQSLRSAVLQHEFCLHYQPIVDTSSGEGVALEALL 868 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQ 507 R + P PD I E GL+ +G WV++++ R L +GIM+ +++N+S Q Sbjct: 869 RWRHPQRGLVPPDEFIPIAEETGLIEPIGEWVIQQALRDLRQCHSQGIMINMAINVSGRQ 928 Query: 508 LMH--PNMVADMLE-LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 L H P+ A ML LL +Y + P + +E+TES + D ++ L +R+ GV + LD Sbjct: 929 LAHGDPSHFACMLNGLLQKYDVAPQYVHIEITESILMADTELSLKALTAIRHLGVEIYLD 988 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L ++K PI V+KIDK FV+ + D+++I AII + QSL+++++AE Sbjct: 989 DFGTGYSS---LSYLKQFPISVIKIDKSFVDNMLEDRADANLIKAIITMGQSLDMRLVAE 1045 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 GVE+E QR +L G QG+L A+P+P++ E Sbjct: 1046 GVESEPQRSFLQGLGCDFVQGYLVAKPMPLKELE 1079 >UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5B4_GEMAT Length = 966 Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 140/446 (31%), Positives = 237/446 (53%), Gaps = 15/446 (3%) Query: 218 GMLVRSYNLNQQ-LLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTAL 272 G+++ S ++ +Q ++++ Y Q A P++DL N++L + + +AR + Sbjct: 500 GLVLNSRDVTEQSMIKQQYIHQ---AFHDPLTDLANRSLFLYQVGHALARGARQHSPVTV 556 Query: 273 MIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPW 332 + + + + L A + LL+ +L S + ++A++ G +FAV+ Q Sbjct: 557 LFLDLDNFKTVNDSLGHAAGDRLLVDAARRLASCVRSSDLIARLGGDEFAVLVEDAQSVE 616 Query: 333 HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGK 392 + + ++ T +S + ++ S+G+A ++++L A A + A+ +GK Sbjct: 617 EVLVVASRIGTALSRPFMLSGKEVFVSASVGIARSSRGESSDELVRNADVAMYVAKTRGK 676 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 Q F+ + +AA +RL E+D+ A+E +F + QP VE+ +G ++ AE L+R Sbjct: 677 GQHVLFEQEMHDAALERLVVEADLRRAIEREEFFLEFQPIVELDTGNIIGAEALVRWLCR 736 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW-QERGIMLPLSVNLSALQLMHP 511 + P I E GL+V +G WVL +CR W +ERGI ++VNLS QL Sbjct: 737 ERGTVPPGVFIPIAEVTGLIVPIGKWVLRRACREAQRWTRERGIAARITVNLSGRQLQDA 796 Query: 512 NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYA 571 +V D+ + L + P L+LE+TES + + ++A L L+ GV +A+DDFG GY+ Sbjct: 797 GIVDDVRQALEETGLDPTQLVLEITESMLMQNTDVSMARLTALKELGVSLAIDDFGTGYS 856 Query: 572 GLRQLQHMKSLPIDVLKIDKMFVEGLP--GDSSMIA-AIIMLAQSLNLQMIAEGVETEAQ 628 L LQ PID+LKIDK FV+ + G+ ++A AI+ L +L + +AEG+ETEAQ Sbjct: 857 SLSYLQRY---PIDILKIDKAFVDVIDKGGEGPVLASAIVALGDTLRMNTVAEGIETEAQ 913 Query: 629 RDWLAKAGVGIAQGFLFARPLPIEIF 654 R L G + QGFLF+ PL E F Sbjct: 914 RGHLLTLGCELGQGFLFSPPLDEEEF 939 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 131/409 (32%), Positives = 230/409 (56%), Gaps = 8/409 (1%) Query: 247 VSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 ++ LPN+ L LE+ +A Q +MI+ + + L + LL+ + +L Sbjct: 435 LTGLPNRMSLYSGLEERLANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRLVCC 494 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + + ++A++ G +F ++ + Q + ++VL +++ IE +L SIG+ + Sbjct: 495 VGEQGMVARLGGDEFVIVLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGV 554 Query: 367 FYGDLTAE-QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 D + L +A + A+ GKN +FF + E +R+ E+ + A+ ++F Sbjct: 555 SPHDGSDPYSLLKNIDTAMYAAKSSGKNNFKFFTEKMREQINERMQMENHLRQAILRNEF 614 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QPQV++ +G+++ E L+R P+ P+ I E C L++ +G WVL E+CR Sbjct: 615 ELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEWVLCEACR 674 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 ++ W +G+ + +SVN+SA QL + + L+ ++I+PG L LE+TES +DDP Sbjct: 675 QISQWSRQGLEAVCISVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDP 734 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 + ++ L+N GV +A+DDFG GY+ L ++K LP+ LKID+ FV+ + P D+ Sbjct: 735 EQTIPRMKELKNKGVALAIDDFGTGYS---SLSYLKLLPLTRLKIDRSFVKDIETDPNDA 791 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 ++ AA I LA++L L ++AEGVETEAQ ++L G AQG+ F++PLP Sbjct: 792 AICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYFSKPLP 840 >UniRef50_B8G486 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Chloroflexus RepID=B8G486_CHLAD Length = 699 Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 126/364 (34%), Positives = 203/364 (55%), Gaps = 14/364 (3%) Query: 295 LLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERI 354 LL+ + +L S L A++ G +F ++ + + P AI + +++L +S LP E Sbjct: 324 LLVAIASRLSSCLRTVDTCARLGGDEFVILLDDIASPTDAIRIVERILRQVS--LPFEID 381 Query: 355 QLRPHCSIGVAMFYGD---LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLT 411 H S+ + + +G Q+ A A + A+ GK + + F+P EAAQ RL Sbjct: 382 GRLFHTSVSIGIVFGANNYTDPSQMLRDADIAMYQAKMAGKGRYRIFEPAMREAAQIRLD 441 Query: 412 EESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGL 471 E ++ A+ NH+F ++ QP + + SG+LV E L+R + P LP + E GL Sbjct: 442 LEHELRRAVANHEFCVYYQPIIHLPSGRLVGFEALVRWRHPTRGILLPAAFLHVAEEAGL 501 Query: 472 MVTVGHWVLEESCRLLAAWQE---RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQP 528 ++G VLE+ C+ L W+ R L +SVNLSA Q+M PN+ +++LL +Y++ P Sbjct: 502 NDSIGWQVLEQVCQQLVVWRRLNPRAAALSVSVNLSARQVMQPNLYDRLMQLLAQYQVPP 561 Query: 529 GTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLK 588 L LE+TES ++ H A+L LR G+++A+DDFG+GY+ L ++ LPID +K Sbjct: 562 TALKLELTESTFMEYSHDVAALLNRLREQGIQIAIDDFGVGYSS---LSYLVQLPIDQIK 618 Query: 589 IDKMFV---EGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLF 645 ID+ F+ E +++ I+ LA +LNL+++AEGVET+ Q DW+ G QG+L Sbjct: 619 IDRNFIVQLESKQHSQAIVNTIVNLAHNLNLEVVAEGVETQGQLDWIRAVGCQYGQGYLI 678 Query: 646 ARPL 649 PL Sbjct: 679 GLPL 682 >UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1U8_SHEAM Length = 1069 Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 138/452 (30%), Positives = 241/452 (53%), Gaps = 16/452 (3%) Query: 213 QDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQTT 270 +DDE G +V L + +R EQ+ A ++DLPN+ LL E L + + Sbjct: 600 RDDE-GQIVHHIGLFMDISRRKQYEQDIWYKANFDTLTDLPNRKLLSERLGHELKMAEHD 658 Query: 271 ----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN 326 A+M++ + + ++LL + ++L++V+ +A++ G +F ++ Sbjct: 659 GRKLAVMVLDLDRFKYINDTQGHDCGDLLLKAVAKRLQTVMGSTDFIARLGGDEFVIVLP 718 Query: 327 GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAF 385 + + +++L M + +E+ + S+G+ ++ D L E L S A +A + Sbjct: 719 RLAQEHAVEQYAKRLLQSMGDPFKVEQGSMSVSASLGIGLYPQDGLDVETLLSNAETAMY 778 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ +G+N ++F + A +RL E D+ A+ N +F ++ QP V+M SG++ S E Sbjct: 779 GAKDEGRNHFKYFTQEMNLALIERLGMERDLRRAVANDEFCLFYQPVVDMESGEVTSLEA 838 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSA 505 LLR Q P+ P I E GLM +G WV++++ LA G L +++N+SA Sbjct: 839 LLRWQDPEQGLVSPVRFIPVAEDMGLMGELGQWVMDKALADLARLHTLGFGLSMAINVSA 898 Query: 506 LQLMHPNMVAD--MLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 Q D + L+R+ I P L +E+TES +D+ H + L +R+ G + L Sbjct: 899 CQCHCKRQSLDEQLRSALSRHGIAPRHLHVEITESLLLDNSHHCLDTLNNIRDLGCAIYL 958 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++K PI +KIDK FVE LPG D+S++ AI+ +++SL ++++A Sbjct: 959 DDFGTGYSS---LSYLKKFPISAIKIDKSFVEQLPGCESDASLVRAIVNMSKSLGMKLVA 1015 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 EG+E++ Q+ +L G QG+L++RPLP E Sbjct: 1016 EGIESKDQQAFLQALGSQFGQGYLYSRPLPFE 1047 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 139/419 (33%), Positives = 226/419 (53%), Gaps = 16/419 (3%) Query: 247 VSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++DLPN+AL E LE +A A++ + + + L A + LL + + Sbjct: 273 LTDLPNRALFYERLEIRLADLHLNGGACAVLCLDLDRFKTVNDSLGHAAGDFLLRAVAHR 332 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +++VL ++A++ G +FAV+ +P A TL +++ + +P + +L+ S+ Sbjct: 333 IRAVLRADDMVARLGGDEFAVLVADADDPARAETLAARLIAAVQAPIPFGKRRLKVGLSV 392 Query: 363 GVAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 G+A +G +E L+ RA A A+ +G+N + F+P EA R E D+ A+ Sbjct: 393 GIAQAPSHG-FDSETLFRRADLALHRAKTEGRNTHRVFEPAMDEAEAARRDLERDLRQAI 451 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E + ++ QPQV +G+L+ E L+R + P P+ I E GL++ +G WVL Sbjct: 452 EGDELILYYQPQVSTGTGRLLGFEALVRWEHPTRGLVPPNAFIPLAEESGLILPLGEWVL 511 Query: 481 EESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +CR A W L ++VNLS Q ++ +L +LT + P L LE+TE+ Sbjct: 512 RAACREAARWAH---PLKVAVNLSPRQFQQADLPERVLAILTETGLAPTRLELEITETLI 568 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF---VEGL 597 I+D A+ ILR L+ GV +A+DDFG GY+ L LQ + P D +KID+ F VE Sbjct: 569 INDMARALGILRRLKAFGVSIAMDDFGTGYSSLATLQ---AFPFDKIKIDRSFVGHVEVS 625 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 P + ++ A++ L +SL + ++AEGVET+AQ +LA AQG+L ++P PIE F E Sbjct: 626 PQAAVIVRAVLGLGRSLGMSVVAEGVETDAQMRFLAAEACDEAQGYLISKPQPIERFAE 684 >UniRef50_A8FY98 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FY98_SHESH Length = 951 Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 138/428 (32%), Positives = 228/428 (53%), Gaps = 12/428 (2%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQ----VVARKQTTALMIITCETLRDTAGV 286 ++ H E+ A +++LPN+ LL + L Q V RK + A++ + + +D Sbjct: 502 IKEHQEQLERIAHYDTLTNLPNRTLLADRLTQSMVQVRRRKSSLAVVFLDLDKFKDVNDA 561 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 + LL+ + +LK L LA+I G +F + +++ + +++L S Sbjct: 562 YGHDVGDKLLIVISRRLKEALRDIDTLARIGGDEFVAVLMDIEKGEDCEPVLERLLEAAS 621 Query: 347 ERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + +E I L+ S+GVA++ D + A+QL A A + A+H+GKN FD Q A Sbjct: 622 GSVTVEGIMLKVSASMGVAIYPQDGIDADQLLRHADQAMYVAKHEGKNCYHLFDTAQNIA 681 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 Q R + + AL+ +F ++ QP+V M +G ++ AE L+R P+ P+ + Sbjct: 682 MQIRHDDLQSMRKALDQSEFVLYYQPKVNMRTGAIIGAEALIRWLSPERGLVGPNEFLPA 741 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRY- 524 IE + + VG WV++ + +AAWQE G+ +P+SVN+SALQL H V + LL + Sbjct: 742 IENHVISIEVGEWVIDTALGQIAAWQELGLDIPVSVNVSALQLQHDGFVTCLAALLEAHP 801 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + P +L +EV E+ IDD A + GV ALDDFG GY+ L +++ LP Sbjct: 802 EVAPSSLEIEVLETSLIDDVMQVSATMLACIELGVTFALDDFGTGYS---SLTYLRRLPA 858 Query: 585 DVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 ++KID+ FV + P D +++ ++ LA+S ++IAEGVET A L + G +AQ Sbjct: 859 SLIKIDQTFVLDMLTTPDDLAIVEGVVSLAKSFKHKVIAEGVETIAHGTTLLQTGCELAQ 918 Query: 642 GFLFARPL 649 G+ ARP+ Sbjct: 919 GYGIARPM 926 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 133/434 (30%), Positives = 227/434 (52%), Gaps = 13/434 (2%) Query: 231 LQRHYEEQNENAMRFPV-SDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAG 285 +++ YE+Q + + + LPN+ L ++ L+ +A+ + +M + + + Sbjct: 376 IRKRYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHIND 435 Query: 286 VLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIM 345 L + LL+ ++ S L +A++ G +F V+ G+ P + + +++L Sbjct: 436 TLGHDAGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERILKTF 495 Query: 346 SERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + + ++ SIG+A F D + L A +A + A+HKGK+ F P+ E Sbjct: 496 APPFMLSGQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGKSAYARFTPEMSE 555 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 + +RL ES + ALE +F ++ QP V+ SG LV+AE LLR P +PD I Sbjct: 556 VSHERLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFIP 615 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQE-RGIMLPLSVNLSALQLMHPNMVADMLELLTR 523 E GL++ +G WV++E+C+ WQ G + ++VN+S Q P ++ L Sbjct: 616 LAEETGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALND 675 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 ++P L LE+TE +D+ IL+ L G+R+++DDFG GY+ L ++KS P Sbjct: 676 SNLRPELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGTGYSA---LSYLKSYP 732 Query: 584 IDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 D LKIDK FV+ + D+S++ AII +A SL L+++AEGVE E +L + Sbjct: 733 FDTLKIDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYS 792 Query: 641 QGFLFARPLPIEIF 654 QG+ ++RPLP + F Sbjct: 793 QGYFYSRPLPEQDF 806 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 136/444 (30%), Positives = 236/444 (53%), Gaps = 21/444 (4%) Query: 231 LQRHYEEQ----NENAMRFPV-----SDLPNKALLMEMLEQVVA----RKQTTALMIITC 277 ++R EQ NE+ + + V +DLPN+ L + L+ ++ + ++ I Sbjct: 440 IEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLFIDL 499 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + L + LL + +L+ + +A++SG +FA+I + + + I + Sbjct: 500 DHFKKINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIILDQLNNIENVILI 559 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQ 396 Q+V ++E + +E +L SIG++++ GD L A +A F A+ G++ + Sbjct: 560 AQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRDNYR 619 Query: 397 FFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSW 456 F+ E A + L E + A++ + ++ QPQVE+ S +++ AE L+R Q P+ Sbjct: 620 FYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGM 679 Query: 457 DLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVA 515 P I E GL+V++G WVL +SC WQ G + +SVN+SA Q ++V Sbjct: 680 ISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLVP 739 Query: 516 DMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQ 575 + +L + P L LE+TES ++D AV L L + G+++++DDFG GY+ Sbjct: 740 MVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYS---S 796 Query: 576 LQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWL 632 L ++K PI LKID+ FV + P D+++ A+I LA+++NL +IAEG+E + Q +L Sbjct: 797 LAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFL 856 Query: 633 AKAGVGIAQGFLFARPLPIEIFEE 656 G G QG+LF+RP+P FE+ Sbjct: 857 LDRGCGYGQGYLFSRPIPAHEFEQ 880 >UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Magnetospirillum RepID=Q2W7L5_MAGSA Length = 916 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 145/429 (33%), Positives = 235/429 (54%), Gaps = 16/429 (3%) Query: 237 EQNENAMRF-----PVSDLPNKALLMEMLEQVV---ARKQTTALMIITCETLRDTAGVLK 288 ++ E+ +RF ++ L N+ +L E L++++ +Q L+ I + + VL Sbjct: 475 KEAESNIRFLARHDALTGLANRVVLRERLDEILPQTGARQMHCLLFIDLDNFKLVNDVLG 534 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 + + LL+ + +L+S+ I+ + G +F ++A ++ A L ++VL +M + Sbjct: 535 HSFGDRLLVEVAGRLRSIEGGHNIVCRHGGDEFILLAPDIRTRERAAELAERVLAVMGDA 594 Query: 349 LPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 I+ + CSIG+++ D T AE L +A A + A+ KG+ QFF Sbjct: 595 FAIDAQAIEVGCSIGISVAPDDGTDAETLIRKADIAMYKAKEKGRLGYQFFTAAMDHQMV 654 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +R E + L + + I LQP+V + G + E L R Q + P I E Sbjct: 655 ERRELEKSLRRGLRDGEIFIHLQPKVRLGDGGVTGFEALARWQSAEHGLVPPVRFIPLAE 714 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 CGL+ +G VL + LA W+ G +LP++VNLSA+QL +P + ++ LL + + Sbjct: 715 ECGLVGAIGDVVLRRTLETLAGWRAAGRKVLPVAVNLSAVQLGNPALAGEIGALLREFDL 774 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 P L LE+TES + D AIL L++ G+R+++DDFG GY+ L ++K P+DV Sbjct: 775 PPSLLELELTESMLMGDVDQVRAILFRLKDQGIRLSIDDFGTGYS---SLSYLKRFPVDV 831 Query: 587 LKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKID+ FV LPGD ++ AII +A++L+L +IAEGVETEAQ +LA+ G AQGF Sbjct: 832 LKIDRSFVTDLPGDPEGEALCLAIIHMAKALSLDVIAEGVETEAQSLFLARHGCDYAQGF 891 Query: 644 LFARPLPIE 652 FARP+P++ Sbjct: 892 HFARPVPVD 900 >UniRef50_Q15NP6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NP6_PSEA6 Length = 718 Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 143/433 (33%), Positives = 230/433 (53%), Gaps = 15/433 (3%) Query: 233 RHYEEQNENAMRFP-VSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQ 291 +H + NE + ++D+PN+ LEQ V ++ + + + + ++ Sbjct: 273 KHLLQNNEKLTYYDALTDIPNRQYFWMQLEQSVNNAMPFYVLYLDIKNFKRINEIHGHSR 332 Query: 292 REILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPI 351 + ++ LVE++ +S + A+I G +FA+I I LG +++ + + Sbjct: 333 GDQIIKELVERITPHISEGDMFARIGGGEFAIIRQKTVTEQQCIDLGHKLIDAAVQPFFL 392 Query: 352 ERIQLRPHC----SIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 HC +IG A F D AE L A A F A+ K+ +QF+ + EA+ Sbjct: 393 PN---GTHCEIGLNIGAASFPRDADDAETLMKFADLAVFNAKKASKSSVQFYSQELKEAS 449 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 Q+ + E+ + +A+ NH+F ++LQP +++TSG ++ AE LLR + DG PD I Sbjct: 450 QRIIELENALQSAITNHEFELFLQPMLDLTSGTILKAEALLRWNRLDGERIGPDEFIPIA 509 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 E GL+V +G WV+ +C +++ RG LSVNLS Q+ +++ + + I Sbjct: 510 EQTGLIVPIGKWVISRACEMISTLNHRGYSCKLSVNLSPRQISDRHLLEFIRGSIQNSHI 569 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 P L LE+TE +D+ +L +R GV V++DDFG GY+ L ++K LPID Sbjct: 570 LPNQLELELTEGVLVDNYDKVQYLLTEVRKLGVSVSIDDFGTGYSS---LSYLKKLPIDH 626 Query: 587 LKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 +KID+ FV+ L D ++I AII +A SL L +IAEGVETE QR++L +AQG+ Sbjct: 627 IKIDRSFVQDLVSDENDKAIILAIIAMAHSLKLNVIAEGVETELQRNFLQLNHCNLAQGY 686 Query: 644 LFARPLPIEIFEE 656 LF+RPLP F E Sbjct: 687 LFSRPLPFAQFCE 699 >UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BUE4_DELAS Length = 692 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 135/417 (32%), Positives = 226/417 (54%), Gaps = 14/417 (3%) Query: 247 VSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L++ML Q ++ +++ A++II + + L ++LL + ++ Sbjct: 263 LTQLPNRVRLIQMLRQALSLASVKRRALAVLIIDLDHFKTINDSLGHQAGDLLLCEVAQR 322 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+ + ++A++ G +F V+ +P T + I+ I+ L + Sbjct: 323 LRGSVRAHDLVARVGGDEFVVVLTDDPDPQETETQASHLQRIIEAPCAIDGTPLVISPCM 382 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDP-QQMEAAQKR-LTEESDILNA 419 G+AM+ GD AE+L +RA SA A+ G+ +QF+ P Q +A Q + L +E + A Sbjct: 383 GIAMYPGDGKNAEELLNRAESAMHMAKDSGRRNLQFYAPAQDGQATQAQMLMQEQQLRGA 442 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 LE +F ++ QPQ G+L E L+R + P LP I E GL+ + HWV Sbjct: 443 LERGEFELYYQPQTFTADGRLAGFEALVRWRHPQRGLVLPGEFIGFAEARGLISAIDHWV 502 Query: 480 LEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 L E+CR WQ+ G+ +PLSVNLSAL+ +M ++ ++L ++ L +E+TES Sbjct: 503 LREACRQARQWQDEGLAPVPLSVNLSALEFRQRDMAREVAQVLEETGLEARWLHIELTES 562 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP 598 + L+ L+ GV +A+DDFG GY+ L +++ PI+ LKID+ F+ +P Sbjct: 563 TLMHTSGQVQDTLQALQALGVGLAIDDFGTGYSS---LAYLRRHPINQLKIDRSFIADVP 619 Query: 599 ---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 D++++ AI+ + SL+L ++AEGVET AQ L + G G+ QG+L A PLP E Sbjct: 620 DSEDDTAIVTAIVQMGHSLHLDIVAEGVETPAQLALLRELGCGMMQGYLVAPPLPAE 676 >UniRef50_A2SCH7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Methylibium petroleiphilum PM1 RepID=A2SCH7_METPP Length = 806 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 148/422 (35%), Positives = 229/422 (54%), Gaps = 19/422 (4%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ M ++Q++AR ++ AL+ I + + L + LL T+ ++ Sbjct: 382 LTGLPNRLAFMAEIDQLMARAAASREALALLFIDLDHFKRVNDSLGHLAGDELLKTVAQR 441 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIE---RIQLRPH 359 + +VL ++A+ G +F V+ G + +++L + L E I + P Sbjct: 442 IGAVLRASDVVARFGGDEFMVLIGGGPRLEDVADVARKLLAAIEVPLDAEVGRSISVTP- 500 Query: 360 CSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILN 418 SIG+AMF GD +T +L A +A + A+ +G+ QFFDP A L E ++ Sbjct: 501 -SIGIAMFPGDGITPAELIKHADTAMYRAKARGRATYQFFDPTLASNAYAALVLEGELAQ 559 Query: 419 ALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHW 478 ALE +F + QPQV G LV AE L+R Q P+ LPD I E LM+ +G W Sbjct: 560 ALERGEFVLHFQPQVRAGDGVLVGAEALIRWQHPERGLLLPDQFIPLAEQQRLMLPIGTW 619 Query: 479 VLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI-LEVT 536 VL E+ R W + G+ +P++VNLSA+Q P+ V+ + + L + PG L+ LE+T Sbjct: 620 VLHEAARAARRWHDDGLCAVPVAVNLSAVQFQAPDFVSTVAQALAGAGL-PGRLLELELT 678 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 E +D+ L L+ G+R+++DDFG GY+ L H+KSLPID +KID+ FV Sbjct: 679 ERMLMDELPEVSGRLAQLKALGIRLSVDDFGTGYS---SLGHLKSLPIDKMKIDRSFVVD 735 Query: 597 LP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 LP G ++ AII +A+SL + +IAEGVETEAQR +LA+ QG + L ++ Sbjct: 736 LPEARGSVAIARAIIQMARSLGITVIAEGVETEAQRAFLAREQCDELQGEAISPSLSLQA 795 Query: 654 FE 655 FE Sbjct: 796 FE 797 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 145/447 (32%), Positives = 233/447 (52%), Gaps = 22/447 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLM----EMLEQVVARKQTTALM 273 G+++ + +++++ +R +E A P++ LPN+ L + L Q + AL+ Sbjct: 299 GIVINARDISER--KRFEKELVHQAYHDPLTGLPNRVFLQRRLADSLAQAARERTRVALL 356 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 I + + L + +L L ++L + + A+ G +F V+ NG Sbjct: 357 FIDLDNFKLINDSLGHDAGDRVLSELGKRLLGCIRCGDMAARFGGDEFMVLINGTPGTDA 416 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSRAISAAFTARHKGK 392 A+ ++ ++E ++ +L SIGVA+ D E L A +A A+ GK Sbjct: 417 ALAAADRLAATLAEPFVVDGHELVITTSIGVALGGDPDDRPEDLIRNADAAMHRAKLLGK 476 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 + FDP A +RL E D+ + LE +F I+ QP +++ + + V E L+R P Sbjct: 477 ARRVVFDPAMYAQAVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVEALVRWHHP 536 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP------LSVNLSAL 506 + P I E GL+V +GHWVL E+CR LAAW+ P +SVNLSA Sbjct: 537 ERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWR---TAFPDCAPSAVSVNLSAR 593 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q HP++ AD+ ++L + P +L LE+TES +DD + + LR L+ GV++A+DDF Sbjct: 594 QFRHPSLTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDF 653 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K P D +KID+ F GL D +++ A+I A +L LQ+ EGV Sbjct: 654 GTGYS---SLSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGV 710 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLP 650 ETE Q ++L + G + QGFLFA P+P Sbjct: 711 ETEEQLEFLERVGCDLVQGFLFAPPMP 737 >UniRef50_Q2VYM7 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2VYM7_MAGSA Length = 982 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 146/433 (33%), Positives = 227/433 (52%), Gaps = 18/433 (4%) Query: 236 EEQNENAMRFPVSD-----LPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGV 286 + ++E +RF S LPN+ +ME L + + R + T A++ + +D Sbjct: 541 KRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRAEQTGERLAVLYLDVNRFKDINDS 600 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 A + LL + +LK+ + ++ ++ G +F ++ V + A +VL + Sbjct: 601 YGHAVGDELLRQVARRLKACVRASDVIGRLGGDEFVMLLPSVGDHTAAQACANKVLYAFA 660 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 E +E +QL SIG+A++ D AE L SRA +A + A+ +G FD + Sbjct: 661 EPFDMEGLQLFAGTSIGIALYPDDADGAESLLSRADAAMYHAK-RGGLPYSCFDIEMDRQ 719 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 +R++ E+D+ AL QF + QP+V+ SG ++ AE L+R + P + P I Sbjct: 720 VAERVSLENDLRLALGEDQFRLVYQPKVDALSGAIIGAEALIRWRHPVRADVSPGLFIPV 779 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRY 524 E GL+ + WVL E+CR +A W+ +G++LP +SVNLS Q + + L Sbjct: 780 AERAGLIGAIDDWVLVEACRQVAEWRAQGLILPSISVNLSPAQFHDGRLKEKVKAALAGS 839 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + P L LE+TE+ D A+ IL L GVRV+LDDFG GY+ L ++K P+ Sbjct: 840 GLPPSVLELEITETMMASDVDRAIEILGQLTTLGVRVSLDDFGTGYS---SLAYLKLFPV 896 Query: 585 DVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 LKID+ FV LPG D ++IA++I LA +L +IAEGVET Q +LA G I Q Sbjct: 897 STLKIDRAFVTELPGNAKDGAIIASVIALAGNLGFSVIAEGVETREQAAFLAARGCPIMQ 956 Query: 642 GFLFARPLPIEIF 654 GFLF+RP+ F Sbjct: 957 GFLFSRPVNAATF 969 >UniRef50_A7BRN3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BRN3_9GAMM Length = 581 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 131/433 (30%), Positives = 225/433 (51%), Gaps = 26/433 (6%) Query: 247 VSDLPNKALLMEMLEQVVAR-----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 ++ LPN+ L M+ L++ + R K T A++ + + + T L + LL+ + + Sbjct: 138 LTGLPNRQLFMDYLDKALMRTKQHQKTTFAVLFLDLDRFKVTNISLGHDMGDWLLMEVAQ 197 Query: 302 KLKSVLS--------------PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 +L++ L+ + ILA+ G +F ++ + + A L + ++++ Sbjct: 198 RLQNCLNNFRGKSFCFTKTFASKDILARAGGDEFLILLENISDITEANRLAVTINKVLAK 257 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 I+R ++ SIG+ +L A +A + A+ GK+ F P E A Sbjct: 258 PFLIDRYKIMTSASIGIVYRTSQQEGMELLRDADAAMYRAKALGKSGYAIFSPGMREEAI 317 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 RL E D+ A+ N F ++ QPQ E+ S +LV E L+R P+ LP + +E Sbjct: 318 SRLQIEMDLHQAIVNKNFVLFYQPQTELYSNQLVGIESLIRFHHPENGLILPMEFLPVLE 377 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRI 526 G+++ +G W+L+ +C+ L W E G+++ ++VNLS Q N++ + + L I Sbjct: 378 DTGIIIPIGEWILQTACQQLKTWLEAGLLIERVAVNLSPYQFRSKNLLKRVADALENSGI 437 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 P +L LE+TES + D +A+ L+ ++ G+RV +DDFGMGYA L ++K P D Sbjct: 438 APESLELEITESLLLKDIDSAIKTLKSFKDMGIRVIIDDFGMGYA---SLDYIKRFPADG 494 Query: 587 LKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 +KID F+ G+ P D+++ A I +A +L L ++AEGVET QRD+L G +AQG Sbjct: 495 IKIDNSFINGIISSPEDATITVATIDMAHALGLTVVAEGVETVEQRDFLRDHGCDLAQGL 554 Query: 644 LFARPLPIEIFEE 656 +A P+ F E Sbjct: 555 FYAAPMKNTAFLE 567 >UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XP68_PSEMY Length = 1254 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 143/444 (32%), Positives = 233/444 (52%), Gaps = 16/444 (3%) Query: 219 MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMI 274 +L+R+ L+ QR+ E A ++ LPN+ LL++ L+ + R+ AL+ Sbjct: 800 LLIRASVLDISERQRYQREIERLAYSDELTGLPNRRLLLDRLQHAMDRENREGSLGALLF 859 Query: 275 ITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-QEPW- 332 I + + L + LL + +L L LA++ G +F V+ + EP Sbjct: 860 IDLDHFKTVNDSLGHLIGDALLCEVTTRLARELRTEDTLARLGGDEFVVLLEALGSEPQA 919 Query: 333 ---HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTAR 388 HA +G+++L + IE +L SIG+A+ G A + +A +A + A+ Sbjct: 920 VAEHAAAVGEKLLRGLQGSCLIEGHELAISASIGIALHPLGLQRAADILKQADTAMYRAK 979 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 H G+N + FF P+ A +RL + ++ A+ Q + QPQ+ + + AEVLLR Sbjct: 980 HAGRNALHFFAPEMQAAIDQRLQLQGELRQAIARQQLQLVFQPQLVLADDTVAGAEVLLR 1039 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL 508 P+ PD I E GL+ +G WVLE+SC LA WQ + L L+VNLS +L Sbjct: 1040 WLHPERGEISPDQFIPLAEETGLIQDIGQWVLEQSCATLARWQAQWPQLVLAVNLSPREL 1099 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 VA + + L R+ + L LE+TE ++D + ++ L+ GVR A+DDFG Sbjct: 1100 RQAGCVARVEDCLRRHGVPAQALELEITEGVLLEDVDRCIGNMQQLKAQGVRFAIDDFGT 1159 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVET 625 GY+ L ++K LP+D LKID+ FV L GD+S ++ I+M+A++L+L+ +AEG+E Sbjct: 1160 GYS---SLTYLKRLPLDRLKIDRSFVADLDGDASGRMLVQTILMIARNLDLECVAEGIEQ 1216 Query: 626 EAQRDWLAKAGVGIAQGFLFARPL 649 +Q L + G + QG+LF +P+ Sbjct: 1217 PSQLALLREQGCALGQGYLFGKPM 1240 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 133/420 (31%), Positives = 221/420 (52%), Gaps = 18/420 (4%) Query: 248 SDLPNKALLMEML--EQVVARKQTTALMIITCE-----TLRDTAGVLKEAQREILLLTLV 300 ++LP++ + +L EQ A+++ L ++ + + D+ G LK +LL + Sbjct: 106 TNLPDRNMFQHILAQEQENAKRKHFQLGVLYIDIDHFKVINDSFGYLK---GNLLLGQVA 162 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 E+ K++L ++A + G F V+ G+ P A + +++ + I+ ++ Sbjct: 163 ERFKALLRGNDLIASLGGNRFVVLLTGLAHPEDATIVTLKLMQALESGFCIDNHEVVMTI 222 Query: 361 SIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 S G+A+F GD +E L A + ++ + G N QFF +A RL ES++ A Sbjct: 223 STGIAIFPGDGDDSEALLQSAEQSMYSVKADGGNNYQFFKASTQSSAINRLNMESEMRKA 282 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 +E +F + QPQ+ TSG +V E L+R Q P+ P I E G++V +G WV Sbjct: 283 IERGEFVLHYQPQINATSGHVVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIGEWV 342 Query: 480 LEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 + E+CR AW + G+ L ++VNLSA Q ++ + L + + P L LE+TES Sbjct: 343 MYEACRQNKAWHDAGLAELKVAVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEITES 402 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 + D A +A+L + + G+ +A+DDFG GY+ L ++K PID LKIDK F++ + Sbjct: 403 VIMKDIEATIALLEEIASMGLSLAIDDFGTGYS---SLNYLKRFPIDKLKIDKSFIDDVI 459 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D ++ AII L+ +L L +I EGVE Q WL + QG+ F++PLP + FE Sbjct: 460 SSEDDGKIVEAIIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADEFE 519 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 125/414 (30%), Positives = 226/414 (54%), Gaps = 15/414 (3%) Query: 246 PVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++DLPN+ +L + LE + R + ALM + ++ + + ++LL + Sbjct: 603 PLTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAG 662 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 + V+ ++ ++ G +FA+I + + + + + Q+++ +++ +P++ ++ S Sbjct: 663 RFSGVVRDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTAS 722 Query: 362 IGVAMF---YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILN 418 IG+A+F GD+ + L A A + A+ +GKN +F+ + R+ E + Sbjct: 723 IGIALFPRDGGDV--KNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRY 780 Query: 419 ALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHW 478 A E + + QP+V + SGK+ E LLR PD P I E L++ +G W Sbjct: 781 AKERQELELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEW 840 Query: 479 VLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 VL +C W+E+G++L ++VNLSA+QL P +V + ++ IQP L LE+TES Sbjct: 841 VLRTACLQQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTES 900 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 +++P V +L LR G +++DDFG GY+ L ++KS P+ +LKID+ FV L Sbjct: 901 ALVNNPDEVVQLLERLRTLGCSISIDDFGTGYS---SLSYLKSFPVTILKIDRSFVRDLA 957 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 GD ++ +++ LA +L+++ +AEGVE+E Q L + G QGF+++RP+ Sbjct: 958 HNSGDRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPV 1011 >UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 Length = 1578 Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 135/443 (30%), Positives = 237/443 (53%), Gaps = 24/443 (5%) Query: 232 QRHYEEQNENAMRF-PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGV 286 ++ E Q EN + P++ LPN+ LL++ E +A K A+++I + + Sbjct: 1139 RKQAEAQIENLAYYDPLTALPNRRLLLDRAENALALAQRSKHFGAIVLIDLDGFKTLNDA 1198 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH--------AITLG 338 + LL + ++L L +A++ G +F V+ + E H + +G Sbjct: 1199 RGHDSGDRLLQMVAKRLADSLRDSDTVARLGGDEFIVL---LPELAHDRELAARLGLGVG 1255 Query: 339 QQVLTIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSRAISAAFTARHKGKNQIQF 397 +++ ++ +E Q++ SIG+ +F + L+ A +A + A+ G++++ Sbjct: 1256 EKIRQALATPFTLEAEQVQISGSIGITLFPKLNEKVSDLFKEADTAMYQAKKAGRDKVCL 1315 Query: 398 FDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWD 457 F+ Q + R E+D+ +ALE QF ++LQPQV+ + G + AE LLR P + Sbjct: 1316 FESQMQLEVESRFALEADLRSALEQKQFQVYLQPQVD-SHGVWIGAEALLRWNHPGRGFI 1374 Query: 458 LPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADM 517 P+ I E GL+ +G +VLE+ C+ LA Q+ G+ L +++N+S Q N ++ Sbjct: 1375 PPNIFIPIAEEIGLIGGIGDFVLEQVCQYLARLQQLGLTLRIAINVSPRQFRQANFAKEI 1434 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 LL + P L LEVTE ++D H A+A + L+ G+ ++DDFG GY+ L Sbjct: 1435 KNLLACTGVDPYRLTLEVTEGLIVEDTHQAIATMFELQTLGIHFSVDDFGTGYSS---LS 1491 Query: 578 HMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K LP++ LKID+ FV+ P D ++++ AII +A++ NL ++AEGVETE Q +LA+ Sbjct: 1492 YLKRLPLNELKIDRAFVQDAPQDLNNAALVEAIISVARTFNLAIVAEGVETEEQVQFLAQ 1551 Query: 635 AGVGIAQGFLFARPLPIEIFEES 657 G QG+ + RP+PI+ F + Sbjct: 1552 LGCNFYQGYFYGRPMPIDEFHQK 1574 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 128/413 (30%), Positives = 222/413 (53%), Gaps = 12/413 (2%) Query: 247 VSDLPNKALLMEMLEQ----VVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN++LL + L Q V + A+M + + + L + LL T+ E+ Sbjct: 487 LTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAER 546 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + +A+I G +F +I + ++ + +++L +S+ L + ++ SI Sbjct: 547 LTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASI 606 Query: 363 GVAMFYGDLTAEQ-LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+A++ D T Q L A A + A+ +GKN Q+F + A + L E+ + ALE Sbjct: 607 GIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRALE 666 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++F I+ QPQ+++ SG+LV E L+R Q PD P I E GL++ +G W L+ Sbjct: 667 RNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQ 726 Query: 482 ESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +C AW + G M L ++VNL +Q + + +L + + P L LE+TES Sbjct: 727 TACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESML 786 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG- 599 + + +L L+ GV +A+DDFG GY+ L ++K+ PI+ +KID+ F+ +P Sbjct: 787 MSKAEESTTVLHKLKEMGVSLAIDDFGTGYS---SLSYLKNFPINRVKIDRSFIRDVPNN 843 Query: 600 --DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 D+++++AII +A +LNL++ AEGVE +Q ++L+ QG+L + PLP Sbjct: 844 PDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLP 896 >UniRef50_C6PPB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PPB4_9CLOT Length = 973 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 122/423 (28%), Positives = 227/423 (53%), Gaps = 10/423 (2%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 A +++LPN+ LME+LE +++ + ALM++ + + L + +L + E Sbjct: 549 AYHDSLTNLPNRRKLMEILEDDISKNKYGALMLLDLDNFKGINDTLGHLYGDKVLKKVSE 608 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 KL+ + +M +++ G +F ++ ++ Q++ + +L IE ++ CS Sbjct: 609 KLQYIKDEKMFISRFGGDEFLILIQDEKDIAIIENYANQIINVFKNKLVIEGQEIYLSCS 668 Query: 362 IGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 +GV ++ + QL A A + ++KGKN FF+ + E Q+++ E + +A+ Sbjct: 669 MGVTLYPFDSNKVSQLLMNADMAMYKVKNKGKNNYMFFNEEMTEKLQEKIKVEGILRDAI 728 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 + + + QPQV +GK+V E LLR++ S P I E GL++ +G WV Sbjct: 729 KKEKLKLLYQPQVCTFTGKVVGFEALLRLKDKHIS---PAQFIPVAEETGLIIEIGRWVT 785 Query: 481 EESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +E+ + W+++G+ + P+S+N S QL N + + L ++ + +E+TES Sbjct: 786 KEAVNQINRWKKKGLDIKPISINFSPKQLNDLNYIEFLENTLKEVSVEAKYIEIEITESI 845 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 +++ +A + L++ G++++LDDFG GY+ L L LP+D +K+DK + Sbjct: 846 FLEEKEKNIAFINRLKSLGIKISLDDFGTGYSSLNYLTF---LPVDKIKLDKSLNDKFLE 902 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 + +I ++I LA+SLNL++IAEG+E AQ L AG QG+LF++PL +E E+ Sbjct: 903 FENVKVIDSLIFLAKSLNLEVIAEGIEDVAQYKRLKSAGCHYIQGYLFSKPLEVEDAEKI 962 Query: 658 YLE 660 Y + Sbjct: 963 YYD 965 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 127/422 (30%), Positives = 228/422 (54%), Gaps = 13/422 (3%) Query: 247 VSDLPNKAL----LMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L L E++ + R + A++ + + + L ++LL ++ Sbjct: 1059 LTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLGHEVGDLLLKAAADR 1118 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 + L ++A++ G +F VI ++ P A + ++ +++S+ ++ SI Sbjct: 1119 IVGCLRSNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKVFAFSGQEMYISTSI 1178 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++++ GD L A +A F A+ +G N QF++ AA KRL E+++ ALE Sbjct: 1179 GISLYPGDGEDVSTLVKHADTAMFRAKEQG-NSYQFYEKGMETAAVKRLGLEAELRRALE 1237 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++ A++ QPQ+ + +G++ + E L+R P+ P I E GL+ ++G W+L Sbjct: 1238 QNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLAEETGLIASIGAWILR 1297 Query: 482 ESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+C + +W +RG ++VN+S +L ++V ++ +L + P L LE+TES Sbjct: 1298 EACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETGLPPKWLELEITESVV 1357 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL--- 597 + AA+ R LR G++ A+DDFG GY+ L ++KS P+D+LKID+ F+ + Sbjct: 1358 MKGAGAAIPKFRRLREMGIKFAIDDFGTGYS---SLNYLKSFPVDILKIDRCFIHDVVSN 1414 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 P D+++I II LA SL L+++AEGVET+AQ ++L QGF + PL E++ Sbjct: 1415 PDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYLSEPLSAAEIEQA 1474 Query: 658 YL 659 L Sbjct: 1475 IL 1476 >UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBP4_CHRVI Length = 648 Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 138/425 (32%), Positives = 225/425 (52%), Gaps = 12/425 (2%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+A LEQ + R ++ AL+ + + ++ L + LL + E Sbjct: 226 LTGLPNRAYFQSRLEQCLQRAKRYQRRFALLFLDLDRFKEVNDTLGHHVGDALLCRVAEI 285 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + + +A++ G +F +I + EP + +V+ S L +E + S+ Sbjct: 286 LSAQIRDVDTIARLGGDEFVIILEDISEPRFIMHFVDRVMDDFSRPLRLEGREFFVTVSV 345 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++++ D L E L RA A + + G+N FF+P A +RL E D+ A++ Sbjct: 346 GISLYPDDGLDLETLVRRADIAMYQTKKSGRNGFSFFEPTMSAGAIERLHLEHDLRLAMQ 405 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +F ++ QPQV++ +G+L+ E L R + P LP I E GL+ +G +LE Sbjct: 406 REEFELYYQPQVDLITGELMGVEALCRWRHPQLGVLLPGLFIPMAEDLGLIDELGLRILE 465 Query: 482 ESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 CR + AW G+ +P L+VNLS +L + A + E+L R + P L LEVTES+ Sbjct: 466 LGCRQMVAWDASGLNVPRLAVNLSVRELERLQLPAQVAEILERTGLDPRRLELEVTESKL 525 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP-- 598 + A+ L LR GV +A+DDFG GY+ L ++K LP++ LKID+ F+EGL Sbjct: 526 MRHAEMAILALNALRALGVTLAIDDFGTGYSS---LSYLKRLPLNRLKIDRSFIEGLTHD 582 Query: 599 -GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 D S+ AII LA +L L+++AEG+E Q ++L G QG+L++RP+ E + Sbjct: 583 VNDDSIARAIIALAHTLGLEVLAEGIEAREQANFLFGEGCLQGQGYLYSRPMIAEELAAT 642 Query: 658 YLEEK 662 +L+ K Sbjct: 643 WLKPK 647 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 134/429 (31%), Positives = 226/429 (52%), Gaps = 13/429 (3%) Query: 234 HYEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKE 289 H E+ A P+++LPN+ L+ +LEQ + +QT A + + + + + Sbjct: 386 HEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQTFATLFLDIDHFKHINDSMGH 445 Query: 290 AQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERL 349 + LL L +L+ +L +A+I G +F +I V + +L++ + Sbjct: 446 FCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVHSDVALLETVGDILSVFQQPF 505 Query: 350 PI-ERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + LR SIG+A++ D +E L A +A + A+ G+N F+ P + + Sbjct: 506 DLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAMYLAKKNGRNGYAFYSPDLTDKSV 565 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 + +S + A+E Q + QPQ + +V E LLR Q P+ P I E Sbjct: 566 SHVRIQSALHQAIEKQQLRLEFQPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAE 625 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRI 526 GL+ ++G WVL +C+ AW E+G+ ++VN+SALQL N + + ++L + Sbjct: 626 KTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGF 685 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 L LE+TES + DP A+A L LR G+ ++LDDFG GY+ L ++K LPI+ Sbjct: 686 PAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDDFGTGYSS---LSYLKGLPINK 742 Query: 587 LKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKID+ FV +P +S +++ AII + ++L+L+++AEG+ET+ Q D+L + G QG+ Sbjct: 743 LKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGY 802 Query: 644 LFARPLPIE 652 LF+RP+ E Sbjct: 803 LFSRPVSAE 811 >UniRef50_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q13PE1_BURXL Length = 728 Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 135/438 (30%), Positives = 222/438 (50%), Gaps = 14/438 (3%) Query: 233 RHYEEQNENAMRF-------PVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAG 285 R E+ +N R P+++LPN+ +L E +E ++++ T ++M++ + +D Sbjct: 280 RDITERRQNEERLLRLAHIDPLTELPNRTMLREQVELALSKEMTASVMMVDLDGFKDVND 339 Query: 286 VLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIM 345 L + + +L+ + +L++ +A++ G +FA++ G+ + A + V+ + Sbjct: 340 SLGHSGGDAVLVNVARRLQACARSGDTVARMGGDEFAILLPGLPDAVEAGQIADSVIAAV 399 Query: 346 SERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 S+ L I+ + SIG+AMF GD LT +L S A A + A+ +G++ +FF E Sbjct: 400 SQLLTIDGQPVNIGASIGIAMFPGDGLTVRELLSSADLALYQAKAEGRHCRRFFSADLRE 459 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 A R + ++ AL + +F + QPQV + LV AE LLR + P P + Sbjct: 460 EATLRRAYQGELARALAHQEFELHYQPQVRLADSTLVGAEALLRWRHPQKGLLGPGAFLP 519 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRY 524 IE L +G W++ +C A W+ + VNL Q ++ +L L + Sbjct: 520 AIEAGLLAPRIGDWIISMACEQAAQWRSLVPDFRVGVNLFGAQFRTGDLADKVLAALQAF 579 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + P L LE+TE+ + + LR L GV +A DD+G GYA L L K P+ Sbjct: 580 NLPPAALELEITENIILRHDEHMLGPLRELHQRGVGIAFDDYGTGYASLSML---KRYPL 636 Query: 585 DVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 LKID+ FV + P D+++I AI+ L S L++IAEGVET Q L K G AQ Sbjct: 637 SRLKIDQTFVRAMLESPPDAAIIRAILYLGHSFGLEVIAEGVETGEQAARLRKKGCETAQ 696 Query: 642 GFLFARPLPIEIFEESYL 659 GFLF +P+P E F ++ Sbjct: 697 GFLFGKPMPAEEFARQFI 714 >UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5G1_9CHRO Length = 997 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 130/423 (30%), Positives = 229/423 (54%), Gaps = 17/423 (4%) Query: 246 PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ L N+ L +E LE ++ + + A++ I + + + LL+ + + Sbjct: 578 PLTSLANRRLFLEHLESALSVARSKGEYGAILFIDLDQFKTLNDARGHDAGDHLLIEVAK 637 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQ-EPWHAITLGQQVLTIMSERLP----IERIQL 356 +LK + +A++ G +F V+ + EP A L ++V + ++L + + Sbjct: 638 RLKQSVRKSDTVARLGGDEFVVLLPQLHHEPTTAAHLSREVAEKVRQKLSTPFVFQHEEF 697 Query: 357 RPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 SIG+ +F + T L A +A + + KG+N + FFD + + R T E + Sbjct: 698 IISASIGITIFPKANETVSDLLKEADTAMYQVKEKGRNGVCFFDTTMLVQVESRFTLEKE 757 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 + ALE +F ++LQPQV++ ++V AEVLLR Q P P I E GL++++ Sbjct: 758 LRRALERQEFRLYLQPQVDINE-RIVGAEVLLRWQHPSLGLVPPCAFIPLAEDTGLIISI 816 Query: 476 GHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 G WVL+++C LA +Q + LSVN+S QL V+++ +++ +Q +L LE+ Sbjct: 817 GEWVLQQACFFLADFQAKNPDFHLSVNISPRQLSQAEFVSNLKQIINITAVQANSLTLEI 876 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TE I D +++ L++ G+ ++LDDFG GY+ L ++K LP++ +KIDK FV+ Sbjct: 877 TERLIIQDVDYVSSVMSKLQDLGINLSLDDFGTGYSS---LAYLKRLPLNEIKIDKNFVQ 933 Query: 596 GLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + S+ +I AI+ +A+ NL ++AEGVET Q ++L K G QG+L+ +P P+E Sbjct: 934 DIGNYSNHAPLIEAILAVARHFNLTVVAEGVETIEQANFLKKRGCHFYQGYLYGKPQPLE 993 Query: 653 IFE 655 F+ Sbjct: 994 TFK 996 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 127/432 (29%), Positives = 228/432 (52%), Gaps = 15/432 (3%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVL 287 QR + Q A ++ LPN+ LL++ + + +A RK AL+ I + ++ L Sbjct: 279 QRKIQHQ---AYHDALTGLPNRTLLIDRIRKAIASSNDRKSCIALLFIDLDNFKNINDSL 335 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + +L +++ + + +++I G +F ++ +Q+ A + ++ + ++ Sbjct: 336 GYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVIMLKDLQDKHDAAVMADTIINLFAQ 395 Query: 348 RLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 L +E Q SIG+A++ D T L A +A A+ +G+N+ F P E+A Sbjct: 396 ALTVESHQFTITPSIGIALYPEDGKTPYSLVRNADTAMNKAKQEGRNRYHLFTPGLTESA 455 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +R++ E+ + ++ F ++ QP+V + +V E L+R QPDG+ P I Sbjct: 456 LRRISMENQLRQTASDNGFTVYYQPKVNLHDNTIVGMEALIRWIQPDGTIISPAEFIPLA 515 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+V +G VLE +C +R G L +SVNLS Q ++ ++++++ Sbjct: 516 EETGLIVPIGEQVLEAACLDTVELNQRFGTNLKVSVNLSLRQFKQEQLMKNIMDIIAMTA 575 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 I P L LE+TES +DD IL + G+ +++DDFG GY+ L H+K++P+ Sbjct: 576 ICPSCLELEITESTVMDDIEQTKTILEKMDKLGITLSIDDFGTGYSS---LSHLKNMPMH 632 Query: 586 VLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV GLP D ++ AI+ LA+S +L +AEG+ET Q +++ + G + QG Sbjct: 633 TLKIDQSFVAGLPHNKSDQKLVKAIMSLARSFDLSTVAEGIETPEQYNYMRELGCEVMQG 692 Query: 643 FLFARPLPIEIF 654 + ++ P+P+E F Sbjct: 693 YYYSPPVPLEEF 704 >UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TT69_ALKMQ Length = 1242 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 133/490 (27%), Positives = 257/490 (52%), Gaps = 30/490 (6%) Query: 185 PLRNIARELNA-------IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE 237 P +NI RE++A I + + +QL P + G+++ ++ +++ + ++ Sbjct: 603 PNKNIKREISAETKLGKRIYVELTMNNQLEEPSIK-----GIVLNWRDVTERVEAQ--KK 655 Query: 238 QNENAMRFPVSDLPNKALLMEMLE---QVVARKQTT-ALMIITCETLRDTAGVLKEAQRE 293 N A ++ LPN+ + +E Q K TT A+M++ + + L + Sbjct: 656 MNHIATHDQMTQLPNRLHFEKKIEYQCQEAKEKGTTFAVMMLDIDDFKYINDALGMGFGD 715 Query: 294 ILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIER 353 L+ +LK L + + SG F ++ +++ + +++ + S I+ Sbjct: 716 QLITQAARRLKDFLGETRCICRYSGDQFGILIYNLKDIEAYKNIAMKIIDLFSSSFKIDP 775 Query: 354 IQLRPHCSIGVAMFYGDLTAEQ-LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTE 412 ++ S+GVA++ D Q L A F A+ GKN+ + + P+ K T Sbjct: 776 YEIYITMSVGVAIYPDDGQETQSLIKHGNIALFRAKEAGKNRYEMYSPKMDVKNYKAFTL 835 Query: 413 ESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL--PDGLIDRIECCG 470 ++D+ A++N++F ++ QPQV + + +++ AE L+R + P +W L P I E G Sbjct: 836 KNDLRRAIKNNEFKVYYQPQVNLQTSEIIGAEALIRWEHP--TWGLVSPKEFISLAEETG 893 Query: 471 LMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPG 529 ++T+G+W+L + C W + G+ + +SVN S +Q ++V ++ + +++ P Sbjct: 894 FIITLGNWILRQVCETYQKWLKDGLPAIKVSVNYSGIQFFQKDIVENIKNTIHEFQLDPH 953 Query: 530 TLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKI 589 L++E+TE+ ++ A ++ L+ G++VA+DDFG AG L ++ S +D+LKI Sbjct: 954 FLVMEITETVLMNQSQQVSADIQSLQELGIKVAIDDFG---AGFSSLTYLNSFNVDILKI 1010 Query: 590 DKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFA 646 D+ F++G+P D + +I A+I LA+ L ++++AEGVET Q +L K + QGFL++ Sbjct: 1011 DRFFIKGIPLDETSNRIIEAVINLAKDLRIRLVAEGVETWDQLSYLRKLNCTVGQGFLYS 1070 Query: 647 RPLPIEIFEE 656 RP+P E FE+ Sbjct: 1071 RPVPQEDFEK 1080 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 133/425 (31%), Positives = 228/425 (53%), Gaps = 19/425 (4%) Query: 246 PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN+ LLM+ L+Q + + AL+ + + ++ L ++LL + + Sbjct: 704 PLTGLPNRRLLMDRLQQALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQ 763 Query: 302 KLKSVLSPRMILAQISGYDFAVI-----ANGVQEPWHAITLGQQVLTIMSERLPIERIQL 356 +LK+ + +A+I G +F V+ A ++ +G ++++ +++ +E+ ++ Sbjct: 764 RLKNCVREGDTVARIGGDEFVVMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFEV 823 Query: 357 RPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 SIG +F + L+ +A A + A+ G+N ++FFDPQ + R E+D Sbjct: 824 HSTPSIGATLFDSRPQIIDDLFKQADIAMYQAKKAGRNTMRFFDPQMQDTLNTRTALEAD 883 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 + ++E +F ++ Q QV+ + + V AE L+R P P I E L++ + Sbjct: 884 LRKSIERREFNLFYQIQVDEMN-RPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNI 942 Query: 476 GHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 G WVL+E+C L WQ + L L+VN+SA Q + + + +Y I P L L Sbjct: 943 GLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKL 1002 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TES ++ + I+ L+ GV+ +LDDFG GY+ L Q++K LP++ LKID+ F Sbjct: 1003 ELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSSL---QYIKKLPLNQLKIDQSF 1059 Query: 594 VEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 V L D +++ AII +A+SL L +IAEGVET+ QR L G QG+LF++PLP Sbjct: 1060 VHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLP 1119 Query: 651 IEIFE 655 I F+ Sbjct: 1120 IREFD 1124 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 138/424 (32%), Positives = 224/424 (52%), Gaps = 18/424 (4%) Query: 247 VSDLPNKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ LLM+ ++ + + AL+ I + + L + LL + + Sbjct: 478 LTGLPNRTLLMDRMKLAMTASYRDGKHCALLFIDLDNFKALNETLGHEIGDQLLRDIAPR 537 Query: 303 LKSVLSPRMILAQISGYDFAVI----ANGVQEPWHAI-TLGQQVLTIMSERLPIERIQLR 357 L + + +A++ G +F V+ A E + + +G +++ +S+ + Sbjct: 538 LVASVREDDTVARLGGDEFLVLLVDLARTESEAANQVEAIGLKIIEALSQPYSLNNQHYV 597 Query: 358 PHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 SIG +F+G + A+ L ++ A + A+ +G I FFDP+ EA KR E+D+ Sbjct: 598 CTPSIGATLFFGHVVADDLLKQSDLAMYKAKAEGGASIHFFDPKMEEAVIKRAKIEADLR 657 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 L QF + QPQ+ ++G++ E L+R Q P P I E GL++ +G+ Sbjct: 658 QGLIKKQFLLHYQPQI-FSNGRMTGVEALVRWQHPVRGLVPPSDFIPLAEETGLILQLGN 716 Query: 478 WVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVLE +C+ LA W R + L ++VN+S Q P V + E++ P L LE+ Sbjct: 717 WVLEAACKQLAEWATRPELADLTVAVNVSVQQFHQPEFVDHIQEVIRVTGANPERLKLEL 776 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES ++ + + L+ G+ +LDDFG GY+ L ++K LP+D LKID+ FV Sbjct: 777 TESMLAENVQDIIKKMFALKADGIGFSLDDFGTGYS---SLSYLKQLPLDQLKIDQSFVR 833 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + P D+++ I+ LAQSL L +IAEGVETEAQR++L +G QG+ F+RPLPIE Sbjct: 834 DVLTDPSDATIAKTIVNLAQSLGLSVIAEGVETEAQRNFLETSGCHSCQGYFFSRPLPIE 893 Query: 653 IFEE 656 FEE Sbjct: 894 EFEE 897 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 131/420 (31%), Positives = 219/420 (52%), Gaps = 14/420 (3%) Query: 246 PVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++DLPN+ALL + + Q + AR LM++ + ++ L + + LL Sbjct: 388 PLTDLPNRALLNDRIRQCLTDAAARGSQFGLMLLDLDRFKEVNDTLGHSAGDRLLCEAAR 447 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +L + + +A++ G +F+++ V++ + ++L E IE +L S Sbjct: 448 RLNACVRGYDTVARLGGDEFSILLPVVRDRGDLRAIAGRILEAFGEAFIIEGKELFVSVS 507 Query: 362 IGVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+ + G A++L+ +A A + A+ +G+N QF+ + R E + AL Sbjct: 508 IGIVLHMEGQCDADRLFKQADLAMYHAKRQGRNNFQFYAEELAVQVSDRTAMEGALRKAL 567 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 N + ++ QPQV + +G++V AE LLR + P PD I E GL+ +GHWVL Sbjct: 568 GNGELELYYQPQVALPAGRIVGAEALLRWRHPQEGIMTPDRFIPIAEETGLIRDLGHWVL 627 Query: 481 EESCRLLAAWQERGIMLPL--SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 +CR W R + P +VNLS Q + ++ ++ ++ +P L LE+TES Sbjct: 628 TTACRRAVYWH-RTVDSPFKVAVNLSTRQFVRNDLPGELQRIVQDTGCRPEWLELEITES 686 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP 598 + + A L L + G +++DDFG GY+ L ++ P+D +KID+ F++G P Sbjct: 687 LLLGNDAEVGAALEELHDMGFAISIDDFGTGYSA---LSYLNRFPLDQIKIDRSFIQGFP 743 Query: 599 GDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D ++ AII +A +L L++IAEGVET Q ++L G +AQG LF RPLP + FE Sbjct: 744 ADREKVELVKAIISIAGALQLEVIAEGVETSHQAEYLHAQGCRLAQGHLFGRPLPQDRFE 803 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 137/421 (32%), Positives = 226/421 (53%), Gaps = 15/421 (3%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L LE + R + ALM I + + + +ILL T+ + Sbjct: 472 LTGLPNRLLFFNSLENSLERARRRRMEVALMFIDLDRFKIINDTMGHEAGDILLKTVARR 531 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + ++A++ G +F + + A +++ + + + I ++ SI Sbjct: 532 LLEAVRGEDMVARLGGDEFTISLEELSNTEDAAAKAGKLIETIRQPVHIGGHEIVCSASI 591 Query: 363 GVAMFYGDLTAEQLYSRAISAA-FTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+A+F D Q +RA AA + A+ +N +F+ + E A + LT S++ ALE Sbjct: 592 GIAIFPHDADNAQNLARAADAAMYRAKELHRNTFEFYTSELTERAIEHLTLSSEMRQALE 651 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++F ++ QPQ +TSG+LV AE LLR + P P I+ E L+ +G WV+ Sbjct: 652 RNEFELYYQPQFNLTSGRLVGAETLLRWRHPTRGLITPYCFINIAEDSALIDPIGGWVIN 711 Query: 482 ESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI--LEVTES 538 + CR +A W + G+ LP ++ N+S+ QL H ++ + L R+ ++P L LEVTE Sbjct: 712 QLCRDVAGWLKGGLKLPRIAFNVSSKQLEHYDVKGRIEHALQRWGLEPSDLDLELEVTEG 771 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP 598 + +V +LR +R G+ VA+DDFG GY+ L +L+HM PID LKID+MF+ LP Sbjct: 772 -ALQHEERSVEVLRQVRLLGLSVAIDDFGTGYSSLSRLKHM---PIDTLKIDRMFIRDLP 827 Query: 599 GD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D ++ + II+L ++L L+++AEGVE Q +L + AQGFL ++PLP FE Sbjct: 828 DDPNNQALASGIILLGRALGLKVVAEGVENVEQLRFLQERNCDEAQGFLLSKPLPKAAFE 887 Query: 656 E 656 + Sbjct: 888 K 888 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 140/419 (33%), Positives = 228/419 (54%), Gaps = 16/419 (3%) Query: 247 VSDLPNKALLMEMLEQ--VVARK--QTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ LL + L Q +AR+ + ALM + + ++ L + LL + + Sbjct: 327 LTGLPNRLLLNDRLNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARR 386 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+S L +++ G +F ++ + + + +++L + I ++ SI Sbjct: 387 LESCLRASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASI 446 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+A+F D E L A +A + A+ G+N QFF E + ES + A+E Sbjct: 447 GIAVFPDDGENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAVE 506 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL--PDGLIDRIECCGLMVTVGHWV 479 ++F ++ QP++++ +G++V AE L+R Q P SW L PD I E GL+ +G WV Sbjct: 507 RNEFVLYYQPKIDIRTGQVVGAEALIRWQHP--SWGLVAPDRFIPIAEDSGLIRPIGLWV 564 Query: 480 LEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 + E+CR WQ G+ +P++VNLS +QL N + ++ E+L ++P L LEVTES Sbjct: 565 MREACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTES 624 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF---VE 595 I + L LR+ GV++ALDDFG GY+ L ++K LPI+ +KIDK F +E Sbjct: 625 VAIHAETEVINWLHKLRSMGVKLALDDFGTGYSS---LSYLKRLPINNVKIDKSFIRDIE 681 Query: 596 GLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 P D+++I AII ++ L L +IAEGVE Q ++L K G QGF+ +RP+P + F Sbjct: 682 TDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEF 740 >UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAR7_SULNB Length = 958 Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 128/422 (30%), Positives = 225/422 (53%), Gaps = 12/422 (2%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLL 297 A ++ LPN++ + ++++ K A++ I + + L + +L+ Sbjct: 526 AYHDSLTGLPNRSSFEMRINEILSVADIEKDKIAVLFIDLDRFKVINDTLGHHIGDEMLI 585 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 L ++++ L +LA+I G +F VI A +++L ++ E + I+ L Sbjct: 586 ELAHRIQTQLDNDTLLARIGGDEFVVIMKLKMHKKEAGEQAEKLLDVIREPIDIQNYHLN 645 Query: 358 PHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG+A++ D ++ A SA + A+ KGK+ QF+ Q + RL E ++ Sbjct: 646 TTASIGIAIYPDDGKDKNEIVKHADSAMYHAKEKGKDTFQFYTKQLSLDVEARLNLEQEL 705 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 L+A+E + + QPQ + S ++ E LLR + P+ I E GL+V++G Sbjct: 706 LHAIERKELLLHFQPQYALESRNIIGVEALLRWKNEQLGIVSPEKFIGIAEETGLIVSIG 765 Query: 477 HWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 ++V EE+C+ WQ+ GI + +S+N+S++Q ++ + E++ R I + +E+ Sbjct: 766 YFVFEEACKTYMHWQKEGIDIDSISINMSSIQFREEDIFERLQEIILRIGIPAHKIEIEI 825 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TE ++ + IL LRN G ++++DDFG GY+ + ++K L +D +KIDK F+ Sbjct: 826 TERFIMEYSTINLTILEDLRNIGCKISIDDFGTGYSSM---SYLKRLALDTIKIDKSFIT 882 Query: 596 GLPGDS--SMIA-AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 LP DS +M++ AII L++SL Q+IAEG+ET Q +L K G I QGF FA+P+ E Sbjct: 883 DLPHDSHDAMVSKAIIALSKSLGYQVIAEGIETPEQEAFLKKNGCDIGQGFYFAKPMTSE 942 Query: 653 IF 654 F Sbjct: 943 DF 944 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 140/441 (31%), Positives = 219/441 (49%), Gaps = 14/441 (3%) Query: 226 LNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVV--ARKQTT--ALMIITCET 279 L + + QR E+ + + ++ LPN+ALLM+ LEQ++ AR+ T L+ + + Sbjct: 283 LMEDVTQRKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDR 342 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 + + A + LL+ + +L+ L LA+I G +F V+ + L Q Sbjct: 343 FKVINDTMGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQ 402 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFF 398 ++ ++ PI + SIG+A F D L A A + A+ G F+ Sbjct: 403 HLIDSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKEGGGKGYHFY 462 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 P+ A R+ E+++ +ALE +F + QP V G+LV AE LLR P+ + Sbjct: 463 SPEMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIM 522 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADM 517 PD I E G +V +G WVL +CR + W+E G+ +SVN+S Q N + Sbjct: 523 PDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTV 582 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 ++ + P L LE+TE+ + D A L L+ + + +DDFG GY+ L LQ Sbjct: 583 CSIIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQ 642 Query: 578 HMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 PID +KID+ F+ L D +++ AII +A L LQ++AEGVET Q D+L + Sbjct: 643 ---KFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKE 699 Query: 635 AGVGIAQGFLFARPLPIEIFE 655 G QGF F RPL E+F+ Sbjct: 700 QGCHEIQGFYFHRPLSEELFK 720 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 135/424 (31%), Positives = 222/424 (52%), Gaps = 19/424 (4%) Query: 246 PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN+ LL + L+Q +A K ALM I + + L + LL + Sbjct: 390 PLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFIDLDDFKTLNDTLGHDTGDKLLRQVAT 449 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPW-----HAITLGQQVLTIMSERLPIERIQL 356 +L+ + +A+I G +F +I + + W HA + Q+VL ++++ ++ Sbjct: 450 RLRENVREFDTVARIGGDEFVLILPSLDDDWKDAATHAELVAQKVLRVLNKPYLLDSTPY 509 Query: 357 RPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 SIGV +F G T E+L A A + A+ KG+N ++F+D E + E+ Sbjct: 510 HSTPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRNTVRFYDTTMQEVVNAKSVMEAS 569 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 + A+ QF ++ QPQ+ ++G+++ AE L+R + P P+ I E G ++++ Sbjct: 570 MRQAITGQQFVLFYQPQIN-SNGQIIGAEALVRWRHPQKGLIAPNKFIPLAEENGFILSI 628 Query: 476 GHWVLEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 G WVL+ +C L W Q + ++VN+SA Q ++V ++ ++ + P L L Sbjct: 629 GRWVLQTACEQLVEWARQPATAQITMAVNVSARQFHQIDLVEEVERIICQTGANPQLLKL 688 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TES + D V ++ L+ GV +LDDFG GY+ L ++K LP+D LKID+ F Sbjct: 689 ELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSSL---AYLKRLPLDQLKIDQTF 745 Query: 594 VEGLPGDSSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 V + DS+ A A+I LA+S+ +IAEGVE Q L G + QG+LF RP+P Sbjct: 746 VRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGYLFGRPVP 805 Query: 651 IEIF 654 IE F Sbjct: 806 IEEF 809 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 132/420 (31%), Positives = 225/420 (53%), Gaps = 16/420 (3%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 +++LPN+ L + L Q + + A++I+ + + + + LL + + Sbjct: 289 LTELPNRLLFHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATR 348 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+++ + LA++ G +F ++ + + A L Q+VLT +++ + I ++ SI Sbjct: 349 LRAICPAKATLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASI 408 Query: 363 GVAMFYGDLTAEQ---LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 G+ ++ L E+ L A SA + A+ G+N QF+ + A+ R+ ES + NA Sbjct: 409 GMTVY--PLDGEKPSVLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARILLESGLRNA 466 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 ++ +F ++ QPQ+E+ +GKL+ E L+R Q P+ P I E GL++ +G W Sbjct: 467 VDRQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWA 526 Query: 480 LEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 L+E+CR W ++ G+ L +SVNLS +Q P+ ++ + + P L LE+TES Sbjct: 527 LKEACRQSKVWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTES 586 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 + D + L L GV +A+DDFG G++ L ++K PID LKID+ FV Sbjct: 587 IAMGDVEETLEKLTILSRFGVLLAIDDFGTGFS---SLSYLKKFPIDTLKIDQSFVRNCT 643 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 P D+++I A I LA SLNL++IAEGVE Q ++LA+ QG+ + RPL + FE Sbjct: 644 RDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFE 703 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 138/412 (33%), Positives = 215/412 (52%), Gaps = 13/412 (3%) Query: 247 VSDLPNKALLMEMLEQVV--ARK--QTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L+M+ L Q + AR+ + AL+ + + +D + LL + + Sbjct: 391 LTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAAR 450 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L LA++ G +F +IA GV+ A L ++L ++E ++R L SI Sbjct: 451 LSGCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIATSI 510 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+ +F D E L RA A + A+ +G N +FF + A +R E D+ AL Sbjct: 511 GIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMRQALT 570 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 N +F + QPQV + K+V E L+R P LP I E G + +G WVLE Sbjct: 571 NGEFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLE 630 Query: 482 ESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+CR A WQ G+ L + VNL A Q H +V + ++L + + L +E+TE+ Sbjct: 631 EACRQGAQWQHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETML 690 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP-- 598 + D AV+ L L+ GVR+A+DDFG GY+ L+H P+D +KID+ F+ + Sbjct: 691 M-DSETAVSTLGQLKALGVRLAIDDFGTGYSSFNYLKH---FPLDRIKIDQSFIRDIGQS 746 Query: 599 -GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 G+ ++I AI+ +A+SL +++AEGVETE Q +L QGF F+RPL Sbjct: 747 RGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPL 798 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 137/467 (29%), Positives = 236/467 (50%), Gaps = 22/467 (4%) Query: 210 RLHQDDEIGMLVRSYNLNQQLLQ---RHYEEQN----ENAMRFPVSDLPNKALLMEMLEQ 262 L DE +L + +N L+ + Y+E N + ++ L N+ +++ +E Sbjct: 214 HLKNKDEFFLLAKEFNQMSDWLEETLKKYQENNAKLQHDLFHDNLTGLANRVYILQEIEA 273 Query: 263 VVARKQTT-----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQIS 317 + K+ A++ + C+ + L + +L+ + ++L + I A++ Sbjct: 274 EIKEKKANQDHCFAVLFLDCDRFKVINDSLGHDVGDEVLINIAQRLNLCIRKHDIAARLG 333 Query: 318 GYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQL 376 G +F ++ + + + ++L MSE L +E QL SIGV + + A+ L Sbjct: 334 GDEFVILIKNLSDIKQVTQIADRILKQMSEPLILENQQLVITMSIGVVVSQENYENADDL 393 Query: 377 YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMT 436 A + A+ +GK Q F P A +RL ES + ALE +F ++ QP + Sbjct: 394 LRDADITMYHAKQQGKAQYAIFKPIMHTQALERLEVESSLRKALEKQEFYLYYQPIISFK 453 Query: 437 SGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM 496 + +L+ E LLR P W P I E GL+V++G WVL+E+C ++ WQ Sbjct: 454 TSQLIGFEALLRWHHPTQGWISPATFIPIAEETGLIVSLGQWVLQEACHQISIWQSHFPF 513 Query: 497 ---LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP 553 L +SVN+S+ QL + V + ++L +I+ L LE+TE+ +++ + L+ Sbjct: 514 SEPLKVSVNISSFQLNQMDFVEQVKKVLEESKIKASQLNLEITETVIMNNIESTSFKLQC 573 Query: 554 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV---EGLPGDSSMIAAIIML 610 L+ GV++++DDFG GY+ L LQ LPID+LKID+ FV E P + +I AII L Sbjct: 574 LQKLGVKISIDDFGTGYSSLNYLQQ---LPIDILKIDRSFVRRLESNPSEFQIIEAIIKL 630 Query: 611 AQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 L ++ +AEG+ET Q + + GV AQGF+F++PL + E++ Sbjct: 631 GNILGMETLAEGIETSEQYNLIQSLGVDYAQGFIFSKPLNKSLVEQT 677 >UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWM6_METML Length = 651 Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 126/420 (30%), Positives = 223/420 (53%), Gaps = 14/420 (3%) Query: 247 VSDLPNKALLMEMLEQVVARKQTTA----LMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L ++ +Q + + Q T LM + + ++ L ++LL + + Sbjct: 224 LTGLPNRVLFLDRFKQDIKKAQRTGQIVTLMFLDLDKFKEVNDSLGHDIGDMLLKDVARR 283 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L++ + +A++ G +F +I N + + + Q +L ++ + + SI Sbjct: 284 LENCVRDSDTVARMGGDEFTIILNDINSQVNIERIAQDILNQLTMPFHLGDEVIHVSTSI 343 Query: 363 GVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++ + D T E L A A + A+ +G+N+ Q+F P E A KR+ SD+ AL Sbjct: 344 GISNYPKDDTEVELLLKNADQAMYVAKEQGRNRYQYFTPVMQEEALKRMRLISDLWGALN 403 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++QF ++ QP VE+ +G + AE L+R Q P P+ I E GL+V +G W+ Sbjct: 404 DNQFRVYYQPIVELATGAIFKAEALIRWQHPTRGLVGPNDFIPVAEDTGLIVDIGDWLFN 463 Query: 482 ESCRLLAAWQERGIMLPLSVNLSALQL--MHPNMVADMLELLTRYRIQPGTLILEVTESR 539 E + W++ L +SVN S +Q +H N ++ +E L + + I+E+TE Sbjct: 464 EVASQMVKWKQHYPNLQVSVNKSPVQFRSVHDN-CSNWIERLEQLGLSGENFIVEITEGL 522 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-P 598 +D + V+ L R AG+++A+DDFG GY+ L +++ ID +KID+ F + P Sbjct: 523 LLDARDSVVSQLNAFREAGMKIAIDDFGTGYS---SLAYLRKFDIDFVKIDRSFTSNITP 579 Query: 599 GDSSMI--AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 S M+ AII ++ L +++IAEGVET+ QRD L A AQG+L+++P+ ++ FE+ Sbjct: 580 NSSDMVLCEAIIEMSHKLGMKVIAEGVETDEQRDLLRNADCDFAQGYLYSKPITVDQFEQ 639 >UniRef50_A4A7P9 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7P9_9GAMM Length = 834 Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 136/432 (31%), Positives = 227/432 (52%), Gaps = 13/432 (3%) Query: 233 RHYEEQNENAMRF-PVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVL 287 + +++Q E+A +F ++DLPN+ LL + L +++ Q A+ I + + L Sbjct: 384 KEHQKQLEHAAKFDSLTDLPNRILLGDRLSMALSQSQRRGSKVAIAYIDLDKFKAINDRL 443 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 A ++ L+ L ++K+ L LA+I G +F + V + L +++ + Sbjct: 444 GHAAGDLFLVQLSRQMKTALRETDTLARIGGDEFVALIGDVADKTECAVLLRRLSEAIKT 503 Query: 348 RLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 + I L SIGV ++ D A+QL A A + A+ + ++FFD + Sbjct: 504 PVTINGEALSVSASIGVTLYPEDSCDADQLLRHADQAMYAAKQNSSHDLEFFDVSEGYNL 563 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 R S++ AL +F ++ QP+V + SG+L+ AE L+R + P+ P + + Sbjct: 564 DLRRALLSEVRQALLRQEFRLFYQPKVHLPSGELLGAEALIRWEHPERGLLKPAEFLPDV 623 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYR- 525 E L V +G WV+ E+ + W E G+ +P+SVN+ A+QL P+ + L R+ Sbjct: 624 ETSPLSVEIGDWVIAEALSQMNEWLETGLRVPVSVNVGAMQLQAPDFTEKLTLALARHEA 683 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + P L LE+ E+R + D A I++ R GVR+ALDDFG GY+ LR ++K LP + Sbjct: 684 LDPSCLELEILETRALADLEATSRIMKACRRLGVRMALDDFGTGYSSLR---YLKFLPAE 740 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 VLKID+ FV+G+ D +++ AII L ++ + ++IAEGVET L + G G AQG Sbjct: 741 VLKIDQSFVKGMLSDRDDKTIVMAIIGLGETFDREVIAEGVETAEHARELLRLGCGRAQG 800 Query: 643 FLFARPLPIEIF 654 + A P+P F Sbjct: 801 YAIAHPIPASDF 812 >UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W8B7_MAGSA Length = 682 Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 131/447 (29%), Positives = 231/447 (51%), Gaps = 16/447 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTT 270 DE+G +V +YN + + E+ ++ A R ++ LPN+ LL + + +A + ++ Sbjct: 206 DELGEVVHAYNQLLTEIDQRTEDIHQLANRDLLTGLPNRRLLEDRIGHAIALAGRQNRSI 265 Query: 271 ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE 330 AL+ + + L Q + LL + +++ ++ +A+ G +F ++ + Sbjct: 266 ALLFADIDNFKVVNDTLGHKQGDALLRIIADRIHDIMRGMDTVARWGGDEFVIVVESLNS 325 Query: 331 PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF---YGDLTAEQLYSRAISAAFTA 387 A ++ ++++ + + + LR S+G++M+ D+T L A A F A Sbjct: 326 AGEAASVAEKLIETIGVPVQLGSNLLRVGVSVGISMYPQDGADITT--LIKNADMALFEA 383 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + +G+N FFD A +R+ E + A+ +Q + QP++ SG L E L+ Sbjct: 384 KGRGRNTFHFFDQAMNARALRRMDIEMALRQAIPQNQLELHYQPKIASASGALAGVEALV 443 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSAL 506 R ++P PD I E L+V VG WVL E+CR + W+ RG + ++VNLS Sbjct: 444 RWRRPGEGLVQPDEFIPLAEESDLIVAVGEWVLNEACRQIRDWEARGFGEVAVAVNLSPR 503 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 +H V + ++ + ++P + +EVTES + +P + L LR+ G +A+DDF Sbjct: 504 HFLHEKDVDGIFRIVDQSGVRPDLIEVEVTESTFMHEPEKVIGYLNRLRDRGFGIAIDDF 563 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFV---EGLPGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L +++ LPI LKID+ FV E ++ +I AII +A ++ L +IAEGV Sbjct: 564 GSGYS---SLSYLRRLPITTLKIDRAFVMDIEHNADNAEIIRAIIAMANAMGLGLIAEGV 620 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLP 650 E Q ++L A G+ QG+ F+RPLP Sbjct: 621 ENRHQFEFLRHADCGVVQGYYFSRPLP 647 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 137/440 (31%), Positives = 232/440 (52%), Gaps = 14/440 (3%) Query: 233 RHYEEQNENAMRF-PVSDLPNKALLME----MLEQVVARKQTTALMIITCETLRDTAGVL 287 R E + RF P++ L N++ + +L A++ + + + L Sbjct: 653 REAEARIRYLARFDPLTGLLNRSAWQDHAQDVLRHAARHDDRCAVLFLDLDDFKTVNDSL 712 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 A + LL + +L + ++A+I G +F ++ + + + ++VL ++ Sbjct: 713 GHAAGDRLLAQVACRLGGCVRAEDLVARIGGDEFVILLSRLAHAEEPARVAERVLDALAR 772 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 L I+ LR SIG+A++ D + L A +A + A+ G+N +FF P+ + Sbjct: 773 PLQIDSQPLRVGASIGIALYPADGGEIDTLLKHADTAMYEAKESGRNAYRFFLPEMTQRV 832 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +RL E+++ A+E+ + QPQ++ SG++ E L+R Q P+ PD + Sbjct: 833 TRRLQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEALVRWQHPERGLLPPDRFVPFA 892 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+V +G WVL E+C W++ G+ L ++VN+SALQ + VA + +L Sbjct: 893 EQSGLIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNISALQFRRRDFVATVARVLGETG 952 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 P + LE+TES +D VA L G+ +ALDDFG GY+ L ++K LP+ Sbjct: 953 ADPARIELEITESALMDATPELVASFDQLVALGLTLALDDFGTGYS---SLSYLKRLPLR 1009 Query: 586 VLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV+GLP D+++ +A + LA+ L ++++AEGVETE QR +L K G QG Sbjct: 1010 RLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAMQG 1069 Query: 643 FLFARPLPIEIFEESYLEEK 662 +LF+RPL +E F ++ EE+ Sbjct: 1070 YLFSRPLGVEEF-GTWFEEQ 1088 >UniRef50_B8HNN4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=6 Tax=Cyanobacteria RepID=B8HNN4_CYAP4 Length = 584 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 135/467 (28%), Positives = 244/467 (52%), Gaps = 13/467 (2%) Query: 200 ELVGHQLALPRLHQDDEIGMLVRSYNLN-QQLLQRHYEEQNENAMRFPVSDLPNKALLME 258 EL+ ++ R+H+ E + ++NL + ++++ + + + ++ LP++ L++ Sbjct: 122 ELIARVRSMLRIHRQYE---QIAAFNLQLEAMVEQRTAQLHTMVFQDALTKLPSRIFLLD 178 Query: 259 MLEQVV-ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQIS 317 L ++ + Q+ AL+ + C+ + G A + L++ + ++L+ L+P +LA++ Sbjct: 179 KLTDLLNSDHQSLALIYLDCDQFKMINGSFGHAVGDQLIIAIAQRLEQYLAPGDVLARMG 238 Query: 318 GYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQL-RPHCSIGVAMFYGDLTAEQL 376 +F + N + P +L Q +L + ++ C+ + E+L Sbjct: 239 EDEFCFLVNHIDSPTQLESLIQNILQGFQANFTVADCEIFMSVCAGATYVTSRHQQPEEL 298 Query: 377 YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMT 436 A +A + A+ +GK Q F Q RL E+D+ AL++ +F ++ QP +++ Sbjct: 299 LQEADTAMYQAKLRGKGSYQLFQHQMHLTILNRLILENDLQRALKHEEFILYYQPIIQLD 358 Query: 437 SGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM 496 + LV E L+R Q P+ + P I +E GL+V VG L ++C+ L+ WQ++G Sbjct: 359 TQTLVGLEALIRWQHPERNLVPPGEFIPCMETTGLIVPVGLMSLTQACQQLSTWQQQGWT 418 Query: 497 -LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 L LSVNLS Q P+++ D+ +L I P L LE+TES +D+ A+ + + LR Sbjct: 419 DLTLSVNLSTRQFACPSLLDDIDRILAETAINPSQLKLEITESAIMDNAEMAIGLAKELR 478 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQ 612 + +++++DDFG GY+ L ++ LP+D LKID+ FV + + ++ II L Sbjct: 479 SRQIQISIDDFGTGYSSLA---YLHCLPVDSLKIDRSFVSQIQTHNRNYQIVKTIIALGH 535 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 LNL +IAEG+ET Q +WL K QG+LF+ PLP E YL Sbjct: 536 QLNLAVIAEGIETSQQLEWLKKLDCEFGQGYLFSHPLPATEIERLYL 582 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 135/422 (31%), Positives = 222/422 (52%), Gaps = 12/422 (2%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLL 297 A PV+ LPN+ LL + L+ + R Q A++ + + + L A + LL Sbjct: 527 AYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSLGHAMGDQLLR 586 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + +L + +A++ G +F V+ + + ++ ++L + E I+ ++ Sbjct: 587 LVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEVY 646 Query: 358 PHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG+++F D AE+L A A + A+ G+N FF P+ A +RL ES + Sbjct: 647 TSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHFFSPELNMRATERLLLESTM 706 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 ALE +F + QPQ+E+ SG + E LLR + PD P+ I E GL+V +G Sbjct: 707 RRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLG 766 Query: 477 HWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVL E+CR WQ+ G L ++VN+SA Q N+ + ++L + P L LE+ Sbjct: 767 EWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILMETGLDPALLELEL 826 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES +++P A+ LR L+ G+ +++DDFG GY+ L H+K PID LKID+ FV+ Sbjct: 827 TESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYS---SLSHLKHFPIDRLKIDRSFVK 883 Query: 596 GLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + D+++ AII LA S+ L ++AEG+E Q +++ + QG+ +RP+ E Sbjct: 884 HVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAE 943 Query: 653 IF 654 F Sbjct: 944 EF 945 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 132/427 (30%), Positives = 235/427 (55%), Gaps = 12/427 (2%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLL 297 A P++ LPN+ L L+ V+ Q + A++ + + + L ++LL Sbjct: 807 AHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLK 866 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + ++LK + +A++ G +F ++ G+ +P A T+ ++L + + Sbjct: 867 GIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFF 926 Query: 358 PHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG++++ D T L A +A + ++ KG+N+++ + A +R+ E ++ Sbjct: 927 TSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHEL 986 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 A+E ++ ++ QP++ + + LV AE L+R P P+ I E G ++ +G Sbjct: 987 RRAVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLG 1046 Query: 477 HWVLEESCRLLAAW-QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVLE++CR + AW Q PLS+NL+ QL HP++ + +LL ++++ G L LE+ Sbjct: 1047 DWVLEQACRQMQAWKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEI 1106 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TE+ + A+A+L L+ GV++A+DDFG GY+ L ++K LP+D+LKIDK F+ Sbjct: 1107 TENFIMSQAEEALAVLYQLKKLGVQLAIDDFGTGYS---SLSYLKRLPLDILKIDKSFIR 1163 Query: 596 GLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 GLP D+++ AII L +S+ L +IAEGVE +AQ+ +LA G QG++ + PLP E Sbjct: 1164 GLPDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPE 1223 Query: 653 IFEESYL 659 F ++L Sbjct: 1224 EFAAAFL 1230 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 153/455 (33%), Positives = 234/455 (51%), Gaps = 18/455 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLME----MLEQVVARKQ 268 DE G LV + +R E+ + + + ++ LPN+ L + L+Q Q Sbjct: 949 DEEGDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQ 1008 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI--AN 326 LM + + + L A + +L + +L + +S +A++ G +F ++ + Sbjct: 1009 WVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQ 1068 Query: 327 GVQEPW--HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISA 383 G +E AI + + +L ++ +E + SIGVA+ D L A +A Sbjct: 1069 GDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTA 1128 Query: 384 AFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSA 443 + A+ GKN QF+ + A +RL ESD+ ALE +F + QPQ +L A Sbjct: 1129 MYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGA 1188 Query: 444 EVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVN 502 E LLR Q P P I +E GL+ VG W+L E+C+ L +W + + +P +SVN Sbjct: 1189 EALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVN 1248 Query: 503 LSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVA 562 LSA Q + + +L I P L LE+TES + D A+ IL L+ G+ +A Sbjct: 1249 LSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIA 1308 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMI 619 +DDFG GY+ L ++K PIDVLKID+ FV+GLP D+ + AII +A SLNL +I Sbjct: 1309 VDDFGTGYS---SLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVI 1365 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 AEGVE++AQ D+L + G QG+LF RP+P E F Sbjct: 1366 AEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQF 1400 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 142/431 (32%), Positives = 228/431 (52%), Gaps = 16/431 (3%) Query: 236 EEQNENAMRF-PVSDLPNKALLMEMLEQVVARKQTTAL----MIITCETLRDTAGVLKEA 290 +EQ E + P++ LPN+ L + LE + R + A M I + + L Sbjct: 448 QEQLERLAHYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQ 507 Query: 291 QREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI-TLGQQVLTIMSERL 349 + LL+ + ++L L LA++ G +F V+ + P + ++ +L ++ + Sbjct: 508 AGDELLVAIAQRLHQRLRQEDTLARLGGDEFLVVIE--EAPVQQVASIAHALLKVVDQPF 565 Query: 350 PIERI-QLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + SIG++++ GD +A +L A +A + A+ +G N +F+ AA Sbjct: 566 GFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSNAYRFYTESLTRAAN 625 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +RL+ E+ + AL +F + QP VE+ SG+++ AEVL+R Q P + P I E Sbjct: 626 ERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAE 685 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 GL+V +G WVL E+CR AW + G+ L L+VNLS Q + ++V + + L + Sbjct: 686 ETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLP 745 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 P L LE+TE ++ AV L L+ GV +A+DDFG GY+ L ++K P+D L Sbjct: 746 PAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYS---SLAYLKRFPLDKL 802 Query: 588 KIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFL 644 KID+ FV LP DSS ++ II + ++L L+ +AEGVET Q +L + G QG+L Sbjct: 803 KIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYL 862 Query: 645 FARPLPIEIFE 655 F+ PLP E FE Sbjct: 863 FSPPLPAEAFE 873 >UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Q7_DECAR Length = 930 Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 138/415 (33%), Positives = 224/415 (53%), Gaps = 18/415 (4%) Query: 250 LPNKALLMEMLEQVVA--RKQTTALMIITCE-----TLRDTAGVLKEAQREILLLTLVEK 302 LPN+ + LEQ +A ++ ++ I+ + + D+ G Q +L+ E+ Sbjct: 497 LPNRESWLSALEQQLANAKRNSSRFSILQLDLDRFKAINDSMGYSVGDQ---VLIEAAER 553 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +K L I+A++ G F+++ N + +P + +++LT + + I SI Sbjct: 554 VKVSLRKYDIVARLGGNRFSILLNEIVDPQTIGGICEKLLTAFARPFQMGGINAHISASI 613 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GVA+F D L ++ L A SA ++A+ G+N +++ + E E + AL+ Sbjct: 614 GVAIFPNDGLDSKTLMMAAESALYSAKADGRNLYKYYSHEMNEMGTHLFKLERMLRVALD 673 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++F++ QPQV +G+LV E LLR P+ I E GL+V++G WV+ Sbjct: 674 RNEFSVVYQPQVNAKNGELVGVEALLRWHNPELGNVSAVQFIPVAEETGLIVSIGEWVMR 733 Query: 482 ESCRLLAAWQ-ERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +C WQ E G +P++VNLSA Q +++A + +L + L LE+TE Sbjct: 734 AACHQARTWQTELGFEIPVAVNLSARQFRRNDLLASVQTILDETGLPNRLLELEITEGSL 793 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 I DP A+ I+R L G++ ALDDFG GY+ L ++K+ P++ LKID+ FV LP + Sbjct: 794 IVDPIGAIDIMRGLNCLGIKTALDDFGTGYS---SLAYLKAFPLNRLKIDRAFVRDLPDN 850 Query: 601 SSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 S A II L +LN++++AEGVETEAQRD+LA AG + QG+LF +P+ E Sbjct: 851 ESDCAISNTIIALGLNLNMEVLAEGVETEAQRDFLAAAGCQVFQGYLFGKPMSGE 905 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 141/453 (31%), Positives = 239/453 (52%), Gaps = 25/453 (5%) Query: 226 LNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVARKQ----TTALMIITCET 279 L + + +R + E + + F P++ L N+ LL + + Q +A+ Q AL++I + Sbjct: 139 LGKDISERRHAESTIHTLAFFDPLTHLANRQLLHDRMAQALAKSQRHHKVGALLMIDLDN 198 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHA 334 + + LL+ + +++++++ LA+ISG +F V+ G+ + A Sbjct: 199 FKALNDTKGHHIGDELLIQVAQRIQTIVREGDTLARISGDEFVVLLEGLAHEESKAAQEA 258 Query: 335 ITLGQQVLTIMSERLPIERIQLRPHCS--IGVAMFYGD-LTAEQLYSRAISAAFTARHKG 391 +V +++E P E + CS IG+A+F G + E L +A A + A+ KG Sbjct: 259 EKFATRVKYLLNE--PYELLGYEHTCSSSIGIALFNGQPKSKETLLKQADIAMYQAKEKG 316 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 +N+I F+DP E + + T E ++ AL + ++ QPQV + GK+V E LLR Sbjct: 317 RNRICFYDPLMQENIEHKTTMEHELRMALSKEELILFYQPQVNL-EGKIVGVEALLRWNH 375 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPL--SVNLSALQLM 509 P P+ I E GL++ VG WVL +C+ L+ W++ PL S+N+SA Q Sbjct: 376 PQKGLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQ 435 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 + + + G++ LE+TES +D H +A + LR GV +LDDFG G Sbjct: 436 EASFYETVANAIALSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTG 495 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++K LP+D LKID+ FV + D++ ++ II +A + +L +IAEGVE + Sbjct: 496 YSS---LSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDK 552 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 Q ++L + G G+ QG+LF +P+P E E +L Sbjct: 553 EQFNFLMENGCGLFQGYLFGKPMPPEELERLFL 585 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 126/414 (30%), Positives = 220/414 (53%), Gaps = 12/414 (2%) Query: 250 LPNKALLMEML----EQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS 305 LPN+ + ++L E ++ A++ I + ++ L + LL+T+ + ++ Sbjct: 162 LPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMANRFRT 221 Query: 306 VLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 L I+ ++ G +F ++ ++ A + Q++L+ + L + + R SIG+ Sbjct: 222 CLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRVTASIGIC 281 Query: 366 MFYGDLTAEQ-LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 ++ D EQ L A A + A+ +GKN QF+ P + +RL E+++ ALE H+ Sbjct: 282 LYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLRKALERHE 341 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 F + Q + + +GK+ E L+R Q P+ P I E GL+V +G WVL +C Sbjct: 342 FFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAAC 401 Query: 485 RLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 WQ++G+ + ++VNLSA Q N++ D+ L + P L +E+TE + D Sbjct: 402 TQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIMQD 461 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---D 600 A+ IL ++ GVR+A+DDFG+GY+ L H+K PID LK+D F+ +P D Sbjct: 462 AERAIRILTGIKALGVRLAIDDFGVGYSS---LAHIKRFPIDTLKVDSSFIRDIPANRED 518 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 ++ AII + ++L+L +IAEGVET+ Q ++L + QG+ F++P+ E F Sbjct: 519 RAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEF 572 >UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria RepID=B3PID2_CELJU Length = 844 Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 123/425 (28%), Positives = 228/425 (53%), Gaps = 19/425 (4%) Query: 247 VSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L+E LE + R + A++ I + ++ L + +L + + Sbjct: 409 LTGLPNRVQLVERLEHELRRAERHGYYGAVLFIDLDQFKNINDSLGHPVGDKVLEVVATR 468 Query: 303 LKSVLSPRMILAQISGYDFAVI-----ANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 L+ + ++A++SG +F V+ N A + +++ +I+S+ + ++LR Sbjct: 469 LQQSVREEDLVARLSGDEFVVVLTVLDQNMETAALRAGEISEKIRSIISQPYVYDSMELR 528 Query: 358 PHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 CS+GV ++ + + +L A +A + + KG++ I+FF+ + + ++L E D+ Sbjct: 529 VTCSVGVVVYPDKNNSVHELLRYADTAMYQVKEKGRDSIEFFNEEMADKVSRQLVMEGDL 588 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 ALE QF ++ QP++++ S ++V AE LLR + P P I +E G+++ VG Sbjct: 589 HRALEEGQFELYYQPKMDVISSRVVGAEALLRWKHPTKGMVSPVDFIPVLETSGMIIDVG 648 Query: 477 HWVLEESCRLLAAWQERGIM---LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 WVLE++C+ L W E+G+ + LS+N+S Q V D+++ + R+ I P +L + Sbjct: 649 QWVLEDACKTLVKWSEQGLWHEGMKLSINISPRQFRRAAFVQDVIDTIERFPIPPNSLDM 708 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TE I A+A + L + G+ +LDDFG GY+ + ++K LP+ LKID+ F Sbjct: 709 EITEGIVIQRVEDAIATMTLLSDKGISFSLDDFGTGYSS---ISYLKRLPVSTLKIDQGF 765 Query: 594 VEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 V + D ++ II + L+++++AEGVE Q L G QG+LF+ P+ Sbjct: 766 VRDIIVDRNDRVLVETIITMGNLLDMELVAEGVEEAEQLAILKAFGCHFYQGYLFSMPVE 825 Query: 651 IEIFE 655 + +FE Sbjct: 826 LAVFE 830 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 136/430 (31%), Positives = 228/430 (53%), Gaps = 12/430 (2%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 L+R E + A P+S+LPN+ L E + + R ++ A+++I + + Sbjct: 318 LKRSQRELDYLAHHDPLSNLPNRLLFTERIAHALERSKSEQLRGAVLLIDLDHFKHINES 377 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L ++LL ++ E+L+ L LA++ G +F +++ + A L Q +L + Sbjct: 378 LGHNVGDLLLKSVGERLQQDLPGGCTLARLGGDEFGLLSETCADAPQAAELAQNLLRCLE 437 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 ++ +L SIG+++F D + EQ+ A SA F A+ G+ F+ + + Sbjct: 438 APFRLDEHELYIGASIGISLFPDDADSVEQVLRNADSALFKAKSSGREGYAFYVQELTDY 497 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 A++R+ S + +AL+NH+ ++ QP ++ +G V E L+R Q P P I Sbjct: 498 ARQRVELASSLRHALDNHELRVFYQPLHDLENGNPVGMEALVRWQHPQRGLIPPAEFIPI 557 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIMLPL-SVNLSALQLMHPNMVADMLELLTRY 524 E G++ + WVLE++C + W G L +VN+S+ + + ++L Sbjct: 558 AEDNGMIGPIDAWVLEQACGQMMRWNAEGSALRFVAVNVSSRLFSRGELDLKVAQVLAET 617 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + P L LEVTES ++DP AA+++L LR GVR+A+DDFG GY+ L +L K LP+ Sbjct: 618 GLSPQQLELEVTESAIMEDPDAALSLLTRLRALGVRLAIDDFGTGYSSLARL---KRLPV 674 Query: 585 DVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 D LK+D+ FV GLP D+++ A+I L SL L ++AEG+E+ AQ D+L G Q Sbjct: 675 DKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLGLNVLAEGIESPAQVDFLRALGCDYGQ 734 Query: 642 GFLFARPLPI 651 G+ F RP P+ Sbjct: 735 GYHFGRPAPV 744 >UniRef50_D1RM65 Sensory box protein/GGDEF domain/EAL domain protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RM65_LEGLO Length = 845 Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 129/435 (29%), Positives = 223/435 (51%), Gaps = 21/435 (4%) Query: 225 NLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQV----VARKQTTALMIITCETL 280 NL Q++ R+ + ++ LPNK+ + ++L+ V V + I+ + Sbjct: 402 NLENQMIHRNKHDL--------ITGLPNKSSIFDILDTVIKDLVNDNHKFGVFIVDIDRF 453 Query: 281 RDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQ 340 + V ++ + LL + E+L + L + G F VI + + A + + Sbjct: 454 KQVNDVFGHSKGDQLLCMIAERLNDAVKNLGTLCSLGGDQF-VILSSLNHHVSAKKIIKA 512 Query: 341 VLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFD 399 VL + + L C+IGVA+ D + A++L A A A+ +G+N ++ Sbjct: 513 VLCALKPAFEFDHSYLTLSCAIGVAICPQDGIKADELLRCADIAMIRAKEQGRNSFAYYT 572 Query: 400 PQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLP 459 + E +R+ E+++ ALEN +F ++ QP VE+ + K++ E LLR Q P P Sbjct: 573 KKLSEYTYERMLVENELYMALENEEFKLFFQPLVELKTQKVIGLEALLRWQNPRLGLLSP 632 Query: 460 DGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSALQLMHPNMVADML 518 D + GL+ +G WVL E+C L W+++G ++ +S+N++A Q H ++ D+ Sbjct: 633 DNFLPYAHDLGLLTKIGTWVLNEACSQLNIWRQQGHHLIKISINVTAQQFKHAQLLHDIN 692 Query: 519 ELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQH 578 + L Y + L +E+TE I ++ LR LR + +ALDDFG GY+ L ++ Sbjct: 693 KALDHYALPGSCLEMELTEQTLIQGSEEVISTLRELRKKKITIALDDFGKGYSNLNRI-- 750 Query: 579 MKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKA 635 K+ P+D LKID+ F+ L + ++I AII LAQ+LNL ++AEG+E + Q ++L Sbjct: 751 -KNFPLDKLKIDQSFISNLMYSENNKNLIKAIIYLAQTLNLSVLAEGIENQDQLNFLIAN 809 Query: 636 GVGIAQGFLFARPLP 650 QGFL A+P+P Sbjct: 810 KCDYGQGFLLAKPMP 824 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 138/464 (29%), Positives = 247/464 (53%), Gaps = 19/464 (4%) Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQR----HYEEQNENAMRFP-VSDLPNKALLMEMLE 261 L R QDD G+ + ++++ + Q+ + E Q E + + ++ LP + ++L Sbjct: 237 TLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHYDTLTGLPQRDFFFDLLH 296 Query: 262 QVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQIS 317 + +T AL+ + + ++ L + +L + ++L++ + L+++S Sbjct: 297 SHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVAQRLQNNIRITDNLSRMS 356 Query: 318 GYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQL 376 G +F + + L Q+ L+++S + IE + SIG+++F GD T+ E+L Sbjct: 357 GDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEKL 416 Query: 377 YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMT 436 S A SA + A+ G++ +F+ P E AQ L E+++ A+E Q + QPQ ++ Sbjct: 417 LSCADSAMYRAKESGRDAFRFYKPHMNEKAQGLLWLETELRLAIEQEQLELHYQPQYDLN 476 Query: 437 SGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM 496 +G+LV E L+R P+ P I + E L++ +G WVL +CR +AAW GI Sbjct: 477 TGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGIS 536 Query: 497 -LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI-LEVTESRRIDDPHAAVAILRPL 554 + ++VN+SA+Q ++ + +LL Y + P TL+ LE+TES +DD AA + L Sbjct: 537 PIRMAVNISAVQFYRIDLAQMVAKLLDHYGL-PATLLELEITESVLMDDVEAAAETMNKL 595 Query: 555 RNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLA 611 G+++++DDFG GY+ L ++K PI LKID+ F+ + D+++ +II LA Sbjct: 596 TAMGIQLSIDDFGTGYSS---LSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLA 652 Query: 612 QSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 + ++++AEGVET Q +L + QG+LF RPLP + E Sbjct: 653 GHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKDIE 696 >UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MED7_DIAST Length = 894 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 147/429 (34%), Positives = 226/429 (52%), Gaps = 23/429 (5%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ LL++ L A T A++ I + + L + LL + + Sbjct: 460 LTGLPNRRLLLDQLGDASASAVRTGTHGAVLFIDLDHFKTLNDTLGHEIGDYLLQQVARR 519 Query: 303 LKSVLSPRMILAQISGYDFAVIANGV-------QEPWHAITLGQQVLTIMSERLPIERIQ 355 L+S + I+A++ G +F V+ G+ +E A+ ++V+ ++++ PI Sbjct: 520 LESGVRVGDIVARLGGDEFVVLLAGLATEAERAREQVRAVA--EKVVQLLAQPYPIAGQS 577 Query: 356 LRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 CS+G A+F L TA ++ +A A + + + N + FFDP+ A R ES Sbjct: 578 YHGSCSVGAALFGSVLQTAAEVLKQADIAMYQVKAQRGNAVCFFDPRMQVALSARARLES 637 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 D+ +AL QF + LQPQ G +V E LLR Q P+ LP I E L+V Sbjct: 638 DLQDALREGQFLLHLQPQF-TRDGAVVGVEALLRWQHPERGLVLPAEFIGVAEDSELIVP 696 Query: 475 VGHWVLEESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 +G WVL +C LLA WQ R L LSVN+SA Q P+ V + +LL R L Sbjct: 697 LGRWVLASACELLARWQASPRLRELSLSVNVSARQFRSPDFVEQLSQLLLRSGAPAHRLE 756 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 LE+TES ++D ++A + LR GVR A+DDFG GY+ L ++ LP+ LKID+ Sbjct: 757 LELTESLVLEDVEDSIAKMHQLRTKGVRFAVDDFGTGYS---SLAYLTRLPLHRLKIDRT 813 Query: 593 FVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 FV L D ++ I+ +A++L+L+++AEGVETE QR +LA G + QG+L A P+ Sbjct: 814 FVHHLGESRSDDVVVQTILGMARNLDLEVVAEGVETEEQRSFLALHGCDVYQGYLLAHPM 873 Query: 650 PIEIFEESY 658 P+E + Y Sbjct: 874 PVEALQARY 882 >UniRef50_Q2BKT3 Probable signalling protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKT3_9GAMM Length = 825 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 145/441 (32%), Positives = 242/441 (54%), Gaps = 19/441 (4%) Query: 222 RSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV---ARKQTTALMIITCE 278 R YN +Q +QR +E + P++ LPN+ +L E L+Q ++ Q LMII Sbjct: 368 RRYNASQSQIQRLNKEVYQRLNFDPLTHLPNRVMLKEQLKQATENASQNQRIGLMIIQIS 427 Query: 279 TLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLG 338 +++ +L + + L ++++ + + +A++ G +FAV+ + +G Sbjct: 428 GIKEVNNLLGISAGDKALTMAANQIQTAVDFQFPVARLEGLEFAVLLEDQTDDETINHIG 487 Query: 339 QQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLY-SRAISAAFTARHKGKNQIQF 397 +++L ++ ++ SIGVA+F D + ++ + S A +A A+ K + F Sbjct: 488 RRLLQLLQLPCELDGEHFFFQPSIGVAIFPEDASDDESFLSNAHTAMHQAKSSHKRGLCF 547 Query: 398 FDPQQMEAAQKRLTEESDILN----ALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPD 453 F PQ E ++ +ES ++N AL HQ ++ QPQV +G+++ E LLR P Sbjct: 548 FAPQFKE----QIIDESSLINDLHQALAQHQLEVYYQPQVMSNTGQVIGLEALLRWHHPK 603 Query: 454 GSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW-QERGIMLPLSVNLSALQLMHPN 512 P I E GL+ ++G WVL+ +C +A W ++ + ++VNLS+LQ+ +P+ Sbjct: 604 RGMVSPAEFIPVAEKTGLIESIGEWVLDTACFQIAQWNRDHNQNIRIAVNLSSLQVANPD 663 Query: 513 MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAG 572 +VA + L R R+ P L LE+TES I+D A + IL+ L++ GV++A+DDFG GY+ Sbjct: 664 LVATIESTLERARLAPELLELELTESILIEDFEATIKILQQLKDLGVKIAVDDFGTGYSS 723 Query: 573 LRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQR 629 L ++K PID +KID+ FV + S + AII +A SLN+Q+IAEGVET+ QR Sbjct: 724 ---LSYLKQFPIDRIKIDQSFVRDIDQSSKSAEITQAIIAMAHSLNMQVIAEGVETDHQR 780 Query: 630 DWLAKAGVGIAQGFLFARPLP 650 +L QGF F++PLP Sbjct: 781 GFLMSQTCEELQGFFFSKPLP 801 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 147/440 (33%), Positives = 236/440 (53%), Gaps = 24/440 (5%) Query: 228 QQLLQRHYEEQ-NENAMRF-----PVSDLPNKALLMEMLEQVV--ARKQTT--ALMIITC 277 ++ QR E++ NE + + V+ LPN+ LM L Q + A++ ++ A++ I Sbjct: 416 EETTQRMNEQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIFIDL 475 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI---ANGVQEPWHA 334 + ++ L + LL + +L+ + I+A++ G +F V+ N HA Sbjct: 476 DRFKNINDSLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISAAHA 535 Query: 335 ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKN 393 + QQ L S+ +E +L SIG++++ D T ++L A A + A+ G+N Sbjct: 536 VRKIQQTL---SQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRN 592 Query: 394 QIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPD 453 QFF + Q RL ESD+ ALE + + QPQ+++ SG++V E LLR + P Sbjct: 593 SYQFFTQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPV 652 Query: 454 GSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPN 512 PD I E GL++++G + L+ +C LA W +G+ L ++VNLSA Q N Sbjct: 653 RGAVAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSN 712 Query: 513 MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAG 572 + + + ++L + L LE+TES +DDP+ A+ LR LR GV +A+DDFG GY+ Sbjct: 713 LPSLLADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYS- 771 Query: 573 LRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQR 629 L ++K P++ LKID+ FV G+ DS + AA I LA +L +++AEGVETEAQ Sbjct: 772 --SLSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQC 829 Query: 630 DWLAKAGVGIAQGFLFARPL 649 +L I QG+ F+ PL Sbjct: 830 RFLRGQQCDILQGYFFSEPL 849 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 138/422 (32%), Positives = 222/422 (52%), Gaps = 19/422 (4%) Query: 246 PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN+ LL + L +A + AL+ I + + L + LL + Sbjct: 588 PLTLLPNRRLLTDRLNHALASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVAL 647 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQL 356 +LKS + LA++ G +F VI + E A +G+++L +++ P+ + Sbjct: 648 RLKSCIREDDTLARLGGDEFVVILENLSELAMDAATKAELIGEKILAALNQVYPLASQEY 707 Query: 357 RPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 SIGV +F G L+ ++L +A A + ++ G+N ++FFD + +R E + Sbjct: 708 HGAASIGVTLFAGHALSIDELMKQADIAMYQSKKSGRNTLRFFDLDTQKIINERAELEIE 767 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 + A++ Q + Q Q+ + G +SAE L+R P P I E GL++ + Sbjct: 768 LRKAVDKKQLHLHYQIQLN-SVGTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPI 826 Query: 476 GHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 G WVL+ +C L +WQ+ L L+VN+SA Q N VA + E + R+ I P L L Sbjct: 827 GQWVLDTACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKL 886 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TES +++ + + LR G++ +LDDFG GY+ LQ++K LP++ LKID+ F Sbjct: 887 ELTESMLVENIEDIIVTMNALREMGIQFSLDDFGTGYS---SLQYLKRLPLNQLKIDQSF 943 Query: 594 VEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 V L SS ++ I+ +A+SLNL +IAEGVETE Q L G QG+LF +P+P Sbjct: 944 VRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMP 1003 Query: 651 IE 652 IE Sbjct: 1004 IE 1005 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 131/428 (30%), Positives = 224/428 (52%), Gaps = 12/428 (2%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVL 287 +R+ E + A ++DLPN++L ++ L Q A T +M++ + ++ L Sbjct: 475 KRNRELLDHQANYDSLTDLPNRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTL 534 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + + LL + ++L+ L + ++++ G +F +I V+E H L QQ+L I+S+ Sbjct: 535 GHSYGDCLLQEIAKRLRYHLPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQ 594 Query: 348 RLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 + IE +L SIGVA + D +T E L A +A ++A+ G N Q F P A Sbjct: 595 PITIEAEELVITASIGVACYPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEA 654 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 R+ E+ + +ALE +Q ++ QP + + +V E L R P+ PD I Sbjct: 655 HARIQLETHLRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIA 714 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL++ +G+ V+E++C+ +A WQ++ ++VNLS QL ++L R+ Sbjct: 715 EETGLIIPLGYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHN 774 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 +P L LEVTE +D+ +L L G+ +ALDDFG GY+ L +++ P Sbjct: 775 FRPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSA---LSYLRRYPFQ 831 Query: 586 VLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LK+D+ F+ +P + +++ I+ +A L +Q +AEGVET Q ++L G QG Sbjct: 832 SLKVDQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQG 891 Query: 643 FLFARPLP 650 + F+RPLP Sbjct: 892 YWFSRPLP 899 >UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacillus RepID=B9IRT3_BACCQ Length = 909 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 131/456 (28%), Positives = 244/456 (53%), Gaps = 16/456 (3%) Query: 204 HQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQV 263 H A+P +D G+ + ++ + Q+ E+ N A +++L N+ + +EQ Sbjct: 443 HVTAVPIFLKDHISGVYLMIKDITESKQQQ--EQINFLAYHDTLTELANRRAFHQYVEQA 500 Query: 264 VARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 +AR + + A+M + + + L ++LL+ + ++L+S+ +P M LA+++G Sbjct: 501 IARSKISKMPFAVMFLDLDRFKVINDTLGHRVGDLLLIAVAKRLESIATPNMKLARLAGD 560 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQL--Y 377 +F ++ ++ + ++ M+E IE L+ SIG+A+ Y + + L Sbjct: 561 EFTILIENYKKRPDVKKIADTIVAAMNEPFEIENQHLQISPSIGIAI-YPEAGEDPLSIL 619 Query: 378 SRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTS 437 A A + A++KGKN + + + +++ E D+ AL N +F + QPQ+++T+ Sbjct: 620 QHADMAMYEAKNKGKNGSSLYTKELYKKMERKARIEKDLPLALVNEEFYLVYQPQIDITT 679 Query: 438 GKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM- 496 K++ AE LLR + P P I +E ++ +GHWVL ESCR L W G Sbjct: 680 KKIIGAEALLRWKHPLLGDIPPCEFIPIVEETPQVIPLGHWVLNESCRQLKIWHTFGYKD 739 Query: 497 LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRN 556 L +SVNLSA + N++ ++L+++T ++ P + LE+TE + D ++ L+ L+ Sbjct: 740 LKISVNLSAKEFQQNNLIENILQIITDVKVDPKDVTLELTERIAMIDEKETLSKLKQLKE 799 Query: 557 AGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV---EGLPGDSSMIAAIIMLAQS 613 G++ ++DDFG GY+ L ++ PID LK+ + F + P + ++++ I+ LA + Sbjct: 800 YGIQTSIDDFGTGYSS---LAYLSIFPIDTLKVPREFTQLADHRPEERAIVSTILSLANT 856 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 LNL ++AEG+ETE Q +L K QG+ F++PL Sbjct: 857 LNLSVVAEGIETEKQLKFLQKNNCKYMQGYYFSKPL 892 >UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNA1_9PROT Length = 650 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 136/450 (30%), Positives = 237/450 (52%), Gaps = 18/450 (4%) Query: 221 VRSYNLNQQLLQRHYEEQNE----NAMRFPVSDLPNKALLMEMLEQVV--ARKQTT--AL 272 V Y Q+ +Q EQ + A ++ LPN+ L + LEQ + A++ T AL Sbjct: 198 VSEYIKKQEEMQNELLEQKDILEHQATHDALTGLPNRILFNDRLEQSIQKAKRNDTQIAL 257 Query: 273 MIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPW 332 I + ++ L + +L + +L V+ LA++ G +F +I ++ Sbjct: 258 FFIDLDHFKEINDSLGHHIGDEVLKVVATRLNLVIRLEDTLARLGGDEFTIIMEDIKNIQ 317 Query: 333 HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKG 391 + I Q++L ++ E + + L SIG+++F D T L A +A + A+ +G Sbjct: 318 YVIFFSQKILKVLLEPISVNNQNLYLSSSIGISLFPQDSTDLNNLLKYADTAMYKAKSEG 377 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 +N QF+ + E A +R+ + + A+ +F + QPQ++ + KLV E L+R + Sbjct: 378 RNNFQFYSKEMTELAFERVIMVASLKQAIIKKEFVVHYQPQIDAKNKKLVGMEALVRWEH 437 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP--LSVNLSALQLM 509 P P I E GL+V + V+E + ++ W+ G+ P LS+NL+ QL Sbjct: 438 PTLGLVSPAKFIPLAEDTGLIVDIDILVMEIAMMQVSEWRRDGLN-PGILSLNLAIKQLN 496 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 H + + +++Y + L LE+TE+ + P A L+ + G+++A+DDFG G Sbjct: 497 HDTFIIILKHNMSKYDFKSEWLELEITENDVMRKPKDAAVKLKEISELGIKIAIDDFGTG 556 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++K LPID LKID+ F+ +PG D++++ A+I +++SLNL +IAEGVET+ Sbjct: 557 YSSL---SYLKKLPIDKLKIDQSFIRDIPGSEDDNAIVKAVIAISKSLNLDVIAEGVETK 613 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 QRD++ + G QG+ ++RPLP E +E Sbjct: 614 EQRDFVLENGCSKIQGYYYSRPLPAEGIQE 643 >UniRef50_Q2SDR7 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDR7_HAHCH Length = 636 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 128/462 (27%), Positives = 237/462 (51%), Gaps = 24/462 (5%) Query: 209 PRLHQDDEIGML-----VRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQV 263 PR+H+ +G + + L++Q H N ++ LPN+ L E L Sbjct: 175 PRIHEGKVLGRVWSLSDITELKLSEQQALFHSYHDN-------LTGLPNRTLFHERLTHA 227 Query: 264 VARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 + R+ + A+M + + +D + LL +++K L P +A+ G Sbjct: 228 IERRGVQQRDLAVMFLDLDGFKDINDSTGLETGDQLLQMAAQRIKETLPPETTVARYGGD 287 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYS 378 +F V+ ++ + A + +++ + + ++ CSIG+A++ D A+ L Sbjct: 288 EFIVLLENIKTSFEATLVSERLRSAIDRPFTVDDQTFHLTCSIGIALYPTDSRDADALIR 347 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 +A A A+ +G+N QFF + RL +++ +ALE ++F + QP++ + S Sbjct: 348 KADMAMNHAKSRGRNNCQFFADEFEILTSHRLRIRNNLKSALEKNEFNLLYQPKIALHSN 407 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW-QERGIML 497 ++ E L+R ++P G P I E GL++ +G+WV EE+C+ L W +E Sbjct: 408 MIIGVEALIRWRRPSGEVVSPAEFIPAAEENGLIIDIGNWVTEEACKQLQRWGRENHHNF 467 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 +++N+S H ++++ + + L RY ++P L +E+TES ++D + IL LR Sbjct: 468 SVAINISPFHFQHADILSTITQALRRYSVRPELLEIELTESALMEDIEHTIEILAELRKL 527 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSL 614 G+ ++DDFG GY+ L ++K LP+D LKIDKMF++ + D +++ +I LA L Sbjct: 528 GISCSVDDFGAGYSS---LNYLKRLPVDTLKIDKMFIDDITKSQRDLALVDTMINLAHHL 584 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 ++ ++AEGVETE L + +AQG+ F+RP+ ++ E Sbjct: 585 DMLVVAEGVETEETVHLLKEKRCDLAQGYYFSRPVSGKVISE 626 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 151/455 (33%), Positives = 238/455 (52%), Gaps = 21/455 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVARKQTTA---- 271 G + L+Q + +R E + + + V+ LPN+ LL E L QV+A+ + ++ Sbjct: 496 GEVTHYIGLHQDVSERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGV 555 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN--GVQ 329 L+ + + + L ++LL + E L+ +A++ G +FAVI + G Sbjct: 556 LLFVDLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTD 615 Query: 330 EPWHAITLGQQVLTIMSE---RLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAIS-AAF 385 ++SE + + R SIG +F G+ + + R I A + Sbjct: 616 PSAAMQGAEAAARYLLSELGRTFQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIY 675 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N ++FFDP A ++R E + A+E QF + Q Q+ G++ AEV Sbjct: 676 QAKGAGRNTVRFFDPSMEIALRERAAIEEALRYAIEEEQFLLHYQAQIG-EDGRIEGAEV 734 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNL 503 LLR Q P+ P I E G +V +G WVL+++ LA W E +M L L+VN+ Sbjct: 735 LLRWQHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNV 794 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 SA+QL P+ V + +L PG L LE+TES ++D A +A ++ L+ G+ +L Sbjct: 795 SAVQLRQPDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSL 854 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++K LP+ LKID+ FV + D ++ ++++ LA+SL L +IA Sbjct: 855 DDFGTGYS---SLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIA 911 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 EGVETEAQR+ LA G QG+LF+RPLPI FE Sbjct: 912 EGVETEAQRELLAGIGCHCYQGYLFSRPLPIGDFE 946 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 131/420 (31%), Positives = 228/420 (54%), Gaps = 12/420 (2%) Query: 242 AMRFPVSDLPNKALLMEMLEQVV--ARKQTT--ALMIITCETLRDTAGVLKEAQREILLL 297 A P+++LPN+ L LEQ + AR++ A+M I + + L + LL Sbjct: 283 AHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFIDLDNFKRINDTLGHRIGDALLE 342 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + +L + ++ ++ G +F V+ G + + + +++L + +E QL Sbjct: 343 QVAARLTENVPGSQVVGRLGGDEFIVVITGNRVSTTSAAMAERILESLCRPYTVEDYQLH 402 Query: 358 PHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG+A++ D +AE L A +A + A+ +G+N +FF ++RL E+ + Sbjct: 403 SGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGRNTFEFFSQAINRGVRERLDIENGL 462 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 +AL++ F + QPQ+++T+G + S E LLR + P PD I E L++ +G Sbjct: 463 RDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPLLGVIAPDRFIPIAEETKLILPLG 522 Query: 477 HWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WV++ +C L AW+ GI + ++VN+S QL + + ++ R+ + + LE+ Sbjct: 523 LWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDESFFEALGSIVERHGLSGSDIELEI 582 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES +++ A+L+ L++ G+ +++DDFG GY+ L +L K LPI LKID+ FV Sbjct: 583 TESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYSSLGRL---KLLPIQSLKIDRSFVH 639 Query: 596 GLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + G++ + II L SL L++IAEGVET+AQ++ L +G QGFL A+PLP + Sbjct: 640 DIETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNLLQNSGCDAIQGFLIAKPLPAD 699 >UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q6I3_CATAD Length = 750 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 147/464 (31%), Positives = 240/464 (51%), Gaps = 24/464 (5%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQTT-- 270 D G +V ++ L R E E A+R P++ L N+ALL++ ++Q +A+ + Sbjct: 292 DATGTVVSVLTVSHDLTDRKRIEDALAEQAVRDPLTHLANRALLVDRIDQALAKMRVQGG 351 Query: 271 --ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS-VLSPRMILAQISGYDFAVIANG 327 A++ + + + L A + LL+ +L+S V ++A+ G +F ++ Sbjct: 352 RLAVLFLDLDRFKVVNDSLGHAAGDALLVATAARLRSAVRQGSDLVARFGGDEFVILCEH 411 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPH--CSIGVAMFYGDLT-AEQLYSRAISAA 384 VQ A + ++V +S P ER H SIG+A+ +T A++L A +A Sbjct: 412 VQGRKDAADVARRVTRALS--APFERDGQPIHISASIGIAVTSDPMTTADELLRDADAAM 469 Query: 385 F--TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVS 442 F AR+ G FFD E A RL E ++ A+E +F + +P + +++ Sbjct: 470 FRVKARNHGSGSYIFFDDSVREEAVSRLWLEGELRRAIEEKEFRLVYEPVYNLRDRQIIG 529 Query: 443 AEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER----GIMLP 498 E L+R Q P+ P I+ E C L+V +G WVL E+C LA W R L Sbjct: 530 MEALIRWQHPERGLLPPSTFIEIAEDCDLIVPIGRWVLHEACGQLAVWNRRRDPGKPPLT 589 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 ++VNLS QL +VA++ L ++P L LEVTE+ + P A A+L + + G Sbjct: 590 MAVNLSPRQLNDEGLVAEVANALRGSGLEPEQLTLEVTETAVHEAPQFAQAVLSQVSDLG 649 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLN 615 V++ALDDFG GY+ L H++ +P + LKID+ FV GL GD++++ A++ +A +L Sbjct: 650 VQIALDDFGTGYS---SLGHLRRIPANALKIDRAFVNGLEHKGGDTAIVTAVVTMAHALG 706 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 + + EG+E+EAQ ++L G QG+LFA P+ FE +L Sbjct: 707 MITVGEGIESEAQYEYLRALGCDQGQGYLFAEPVSAAAFETLHL 750 >UniRef50_A4BFV7 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Reinekea blandensis MED297 RepID=A4BFV7_9GAMM Length = 814 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 137/431 (31%), Positives = 226/431 (52%), Gaps = 21/431 (4%) Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLK 288 RH EQ+ +A+ + LPN+ L E L + R ++ A++ + + V Sbjct: 385 RH--EQHHDAL----TGLPNRQLFQEQLHHELHRCRRREENLAVVALEVSGIGQINSVHG 438 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 +A + LL + +L L L + S +F ++ + Q P L ++++ + S R Sbjct: 439 DAFSDQLLRRIAGELTKALREEDSLCRYSNDEFLMVISDFQTPEALHALAKRLIKLASTR 498 Query: 349 LPIERIQLRPHCSIGVAMFYGDLTAE-QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 I+ + + ++G+A F D E L + AI+A AR G+N + +F + AQ Sbjct: 499 YQIDDHYVALYANVGIATFPSDARDEGSLITCAITAMRHARQTGRNTLDYFSEESARRAQ 558 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 ++ E + AL H F + QP ++ S + ++AE LLR + PD I E Sbjct: 559 EKWHLERQMTEALAAHDFQLHYQPIFDLDSNRCIAAEALLRWPSTQLA---PDQFIPVAE 615 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRI 526 GL+ +G+W+L + R A W + G L LSVN+S LQL P + + L +Y + Sbjct: 616 ETGLIHPMGNWILSTAVRQWAQWHDEGRELTYLSVNISVLQLQQPGFIDQAISLTKQYHL 675 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 PG L+LE+TES + ++ + LR AG R+A+DDFG G++ L ++K LPID Sbjct: 676 PPGRLVLEITESILLQTSPNVLSQINRLRQAGYRLAIDDFGTGFSS---LNYLKQLPIDY 732 Query: 587 LKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LK+D+ FVEG+ DS++ AI+ +A +++++++AEGVET Q WL + GV AQG+ Sbjct: 733 LKVDRSFVEGIIENNQDSAIYRAIVDMAMAMDIEIVAEGVETPQQMLWLKQQGVTFAQGY 792 Query: 644 LFARPLPIEIF 654 + + LP E F Sbjct: 793 FYTQALPPEKF 803 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 129/417 (30%), Positives = 228/417 (54%), Gaps = 14/417 (3%) Query: 247 VSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L+E L+Q + Q AL+ + + + L A ++LL+ + ++ Sbjct: 436 LTGLPNRIHLIERLKQAIPLAERNGQHLALLFLDLDRFKGVNDSLGHASGDLLLVEVSKR 495 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + + +A+ G +F + G++E A + +++L ++ I+ +Q+ + SI Sbjct: 496 LSNCVRKGDTVARFGGDEFVFLLEGLEEREDAKPIAEKILGALNAPFEIDNVQVFMNGSI 555 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++ + D +++ L RA +A + A+ G N F++P+ ++R + E ++ ALE Sbjct: 556 GISTWPHDGESSDLLLRRADAAMYRAKELG-NSYAFYNPEIGALPERRFSMERELRRALE 614 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++F ++ QPQ+++ +G V AE L+R + P+ LPD I E GL+V +G WV+ Sbjct: 615 RNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQFIPVAESTGLIVPMGAWVIR 674 Query: 482 ESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +C L +W+E G+ L L+VN+S Q ++ + + + L +EVTES Sbjct: 675 SACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTLESSMRESGVDSRLLEIEVTESVL 734 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 + P A+ LR L G+ +++DDFG GY+ L ++K LP+ LKID+ FV LP D Sbjct: 735 MQHPMAS-DTLRELSRMGILISIDDFGTGYS---SLSYLKKLPVYKLKIDRSFVTTLPVD 790 Query: 601 SSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 M+A AI+ + +L L+ IAEGVE+ Q D L + G QG+ ++RPLP + F Sbjct: 791 PDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGCDEIQGYYYSRPLPNDTF 847 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 136/419 (32%), Positives = 219/419 (52%), Gaps = 19/419 (4%) Query: 246 PVSDLPNKALLMEMLE----QVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN + L ++II + L + LL + Sbjct: 432 PITQLPNWIIFNHRLALALVDATHGSNMLGVLIIDLNQFKRINDSLGHGVGDYLLQKASD 491 Query: 302 KLKSVLSPRM----ILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 +L++ L +LA+ G F V+ + + AI Q++L E ++ + Sbjct: 492 RLQNCLESYSFLEPLLARWHGAGFIVLLSQLAYVDEAINFSQKLLNDFQEPFYVQSQAIY 551 Query: 358 PHCSIGVAM--FYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 SIG+A+ + GD ++E L A SA + A+ +GKN Q + P + K L E+D Sbjct: 552 LGVSIGIALAPYDGD-SSEVLLKNAESAMYQAKQQGKNTYQLYRPGSNQDFNK-LILEAD 609 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 + A+E ++F + QPQ+E+ +GKL+ E L+R Q P P I E GL+ + Sbjct: 610 LRKAIERNEFVLHYQPQIELATGKLIGVEALIRWQHPCLGMVSPALFIPLAEETGLICPI 669 Query: 476 GHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILE 534 G W L+ +C WQ+ G+ + ++VNLSA QL ++VA + +++ RI P L LE Sbjct: 670 GEWALKTACHQYQIWQQAGLPKIQMAVNLSAFQLQQYDIVARIAKIIQETRINPRDLELE 729 Query: 535 VTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV 594 +TE+ I + +I+ L+ G+++A+DDFG GY+ L L+H LP++ LKIDK FV Sbjct: 730 ITETTVIQNLERMTSIIEQLKQMGIKIAIDDFGTGYSSLNVLKH---LPVNTLKIDKSFV 786 Query: 595 EGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 + L P D+ + AIIML ++ L+++AEGVET Q ++L G AQGFL +RP+P Sbjct: 787 QDLSNDPNDAKLCQAIIMLGKAFKLEVLAEGVETIKQLEFLKNCGCDHAQGFLISRPVP 845 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 151/435 (34%), Positives = 235/435 (54%), Gaps = 19/435 (4%) Query: 235 YEEQNENAMRFP-VSDLPNKALLMEMLEQ--VVARKQTT--ALMIITCETLRDTAGVLKE 289 Y+EQ E + ++ LPN+ LL + LE VVA++ T A++ + + ++ L Sbjct: 614 YQEQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGH 673 Query: 290 AQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERL 349 + + LL + E+L +A+ G +F ++ + IT ++V ++E + Sbjct: 674 SVGDRLLGVVAERLARCSRTSDTVARHGGDEFVIVMTDTVDEQSLITWMERVRASIAEPV 733 Query: 350 PIERIQLRPHCSIGVAMF--YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 ++ +L CS+G ++F GD AE L +A A + A+ G+N QF+ P+ +A Sbjct: 734 WLDGTELYVGCSMGASLFPQDGD-DAETLMKKADVAMYRAKDMGRNTFQFYQPEMNASAG 792 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 RL E + AL +++F + QPQV++ SG++V E L+R P+ P I E Sbjct: 793 ARLNLERRLRRALRDNEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAE 852 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLP---LSVNLSALQLMHPNMVADMLELLTRY 524 GL+ + WVL E+CR AWQ++G LP +SVNLSA N+ ++++L Sbjct: 853 ESGLIGPLSEWVLREACRQNKAWQDQG--LPPARVSVNLSARVFQQRNIAKLVMQVLAET 910 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 ++P L LE+TES + + AV +L L G+ +A+DDFG GY+ L ++K P+ Sbjct: 911 GLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYS---SLSYLKRFPV 967 Query: 585 DVLKIDKMFVE--GLPGDSSMI-AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 D LKID+ FV G+ GD I +AII LA SL LQ+IAEGVET AQ D+L + Q Sbjct: 968 DRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQ 1027 Query: 642 GFLFARPLPIEIFEE 656 GF FA+PL E E Sbjct: 1028 GFYFAKPLSTEGISE 1042 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 131/440 (29%), Positives = 229/440 (52%), Gaps = 14/440 (3%) Query: 228 QQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDT 283 QQ L + + + A ++ LPN+ L + LE + + AL I + + Sbjct: 373 QQELLKQKDILHHQAHHDALTGLPNRTLFSDRLEHGLKLAERHLGKLALFFIDLDNFKQI 432 Query: 284 AGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLT 343 L + +L+ + ++LK+ + LA++ G +F +I ++ L Q++ Sbjct: 433 NDSLGHQIGDKVLVVVSKRLKAKIRQEDTLARLGGDEFTIIMENFKDVQQVSVLAQKIQK 492 Query: 344 IMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQ 402 ++++ + IE L CSIG++ + D A L A +A + A+ +G+N QF+ + Sbjct: 493 VLNQPMHIEGHTLYISCSIGISFYPQDTQNANDLVKYADAAMYKAKEEGRNNFQFYSTEM 552 Query: 403 MEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGL 462 A +R+ E+ + A++N +F ++ QPQV + ++ E L+R + P LPD Sbjct: 553 TTLAYERVVMEASLRQAIKNEEFILYYQPQVNAQTSRMTGMEALIRWEHPHLGMILPDKF 612 Query: 463 IDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP--LSVNLSALQLMHPNMVADMLEL 520 I E GL++ + WV+ + + + W RG+ P LS+NLS QL N + + E Sbjct: 613 IPLAEESGLILEIDRWVMRTAMKQVREWYARGLD-PGVLSLNLSMRQLKDENFIDVIKEY 671 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L +P L EVTE + + P AVA L +++ G+ +A+DDFG GY+ L ++K Sbjct: 672 LHMMSFEPEWLEFEVTEGQMMKRPDDAVASLGEIKSMGISIAIDDFGTGYSS---LGYLK 728 Query: 581 SLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 LP+ LKID+ F+ G+P D ++++ A I LA+SL+L +IAEGVE E Q+++L G Sbjct: 729 RLPVSRLKIDQSFIHGIPEDRENAAIVKATIALAKSLSLSIIAEGVENEEQKEFLLFNGC 788 Query: 638 GIAQGFLFARPLPIEIFEES 657 QG+ + RP+ + E+ Sbjct: 789 ISMQGYYYGRPMTADQIEKK 808 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 156/468 (33%), Positives = 242/468 (51%), Gaps = 35/468 (7%) Query: 218 GMLVRSYNLNQ-QLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVA----RKQTT 270 G LV Y + QR E + + F P++ LPN+ LL++ L V+A + Sbjct: 450 GGLVTHYVATHIDITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQG 509 Query: 271 ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE 330 A+M I + + + LL + ++LKS + +A++ G +F V+ VQ+ Sbjct: 510 AIMFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVM---VQD 566 Query: 331 PWHAITLGQQVLTIMSE---------RLPIE-----RIQLRPHC--SIGVAMFYGDLT-A 373 + QV + + RL + R L HC SIG+ +F T Sbjct: 567 LAADSMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNV 626 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 ++L +A A + A+ G+N I+FFDP+ A R+ E+D+ A+E QF ++ QPQV Sbjct: 627 DELLKQADLAMYQAKDSGRNAIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQV 686 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 493 S +L AE LLR P I E GL++ +G WVLE +C LA W + Sbjct: 687 VGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQ 746 Query: 494 GIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAIL 551 M L ++VN+SA Q+ + V +L +L P L LE+TES + + +A + Sbjct: 747 PEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKM 806 Query: 552 RPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAII 608 L++ GV +LDDFG GY+ L ++K LP+D LKID+ FV + D+++ I+ Sbjct: 807 TLLKSRGVGFSLDDFGTGYS---SLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIV 863 Query: 609 MLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 LA+SL L +IAEGVETE QR++LA++G QG+LF++PLP+ FE+ Sbjct: 864 ALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQ 911 >UniRef50_A8FVX9 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVX9_SHESH Length = 817 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 145/504 (28%), Positives = 257/504 (50%), Gaps = 23/504 (4%) Query: 165 LLSLILTVAISWCINRLILHPLRNIARELNAIPAKEL-VGHQLALPRLHQ--DDEIGMLV 221 L+++I +++ I LI I R LN + L +G+ + L ++ DDE+ L Sbjct: 295 LVTIITLSTVAFAIPLLIFLSHFQIIRPLNKLHHAFLRLGNNVELIQVKTSGDDELNELG 354 Query: 222 RSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEML----EQVVARKQTTALMIITC 277 + +N L + E+ E A P++ LPN+ + + L E + A+M I Sbjct: 355 KEFNRMSLKLFKSNEKIRELAFNDPLTGLPNRFMFTKHLNLSLESAKCDRGQLAVMFIDL 414 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVL---------SPRMILAQISGYDFAVIANGV 328 + + L + LL + ++L L S ++A++ G +F V + Sbjct: 415 DNFKHINDSLGHQSGDQLLHEIGDRLHRNLRSKDFCEHFSDSDMVARLGGDEFTVFLGEL 474 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTA 387 A + +++L I+S+ + + SIG+A + +T ++L A A + A Sbjct: 475 PSINIAEKVAKRILEIISQPILLSGKSYYISASIGIACYPQNGVTTQELIKNADIAMYHA 534 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + KGK Q F + E + A+EN +F ++ QP V+ + ++VS E L+ Sbjct: 535 KKKGKGGYQHFSDNLSRQNDEFSVIEQKMHEAVENERFELYFQPIVDSNTHRIVSLEALI 594 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSAL 506 R + + PD I E GL+ +G WV+ E+CR L WQ+ GI+ + L++N+SA+ Sbjct: 595 RWYDVEFGFIPPDKFIPLAEKNGLITVIGDWVIREACRQLKIWQDSGIVDIQLAINVSAI 654 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 QL +P ++ + + I PGTL +E+TE+ I+ L LR+ G+RVALDDF Sbjct: 655 QLNNPKFAQELYQTIKNSGIIPGTLYIELTETTIINGEQEIFVTLEWLRSKGIRVALDDF 714 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL--PGDSSMIAAIIMLAQSLNLQMIAEGVE 624 G GY+ L ++++LPID+LKID+ F+ + ++ +++A+I++A +L +++AEGVE Sbjct: 715 GTGYSS---LSYLRNLPIDILKIDQSFIRDINDKNNNVILSAVIVMAHALGFKVVAEGVE 771 Query: 625 TEAQRDWLAKAGVGIAQGFLFARP 648 +L K G + QG++F+RP Sbjct: 772 ERGHLAFLVKEGCDLLQGYMFSRP 795 >UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNV7_THASP Length = 884 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 149/429 (34%), Positives = 228/429 (53%), Gaps = 28/429 (6%) Query: 247 VSDLPNKALLMEMLEQV---VARKQTT-ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ LLME LE+ AR+ T AL+ I + + + + + LL+ + Sbjct: 452 LTGLPNRRLLMERLERAQASCARQGTVGALLFIDLDNFKAVNDTVGHQEGDRLLVQVAAI 511 Query: 303 LKSVLSPRMILAQISGYDFAVI-----ANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 L + +A++ G +F V+ G + A +G ++L +++R + + R Sbjct: 512 LVRCVRKDDTVARLGGDEFIVMLEELGGEGREAAEQAAAVGSKILAALNQRFQLGSSEHR 571 Query: 358 PHCSIGVAMFYGDLTAEQL---YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 SIGV++F G+L E + RA A + A+ G+N + FFDP + + R E+ Sbjct: 572 TSVSIGVSLF-GELADEPVDEPLRRADMAMYRAKLGGRNAVCFFDPSMLADVRARADVEA 630 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 + ALE QF + QPQV G ++ E L+R P P I E CGL++ Sbjct: 631 GLWIALEQRQFVLHYQPQV-AADGAVLGVEALVRWHHPVRGLVPPGEFIPLAEECGLILP 689 Query: 475 VGHWVLEESCRLLAA-----WQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPG 529 +G WVLE +C LAA W+ R L ++VN+SA Q +H + VA ++ L R PG Sbjct: 690 LGRWVLEAACAQLAAWADDPWRSR---LVIAVNVSARQFLHEDFVAGVVAALERSGADPG 746 Query: 530 TLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKI 589 L LE+TES + D + L+ GV +LDDFG GY+ L ++K LP+D LKI Sbjct: 747 RLDLELTESSLVTDVDKVSEKMEALKALGVGFSLDDFGTGYS---SLAYLKRLPLDQLKI 803 Query: 590 DKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFA 646 D+ FV + P D+++ II+LA +L L++IAEGVE E QRD+LA+ G QG+LF+ Sbjct: 804 DRSFVRDILVDPNDAAIARMIIVLADNLGLRVIAEGVECEEQRDFLARNGCSSYQGYLFS 863 Query: 647 RPLPIEIFE 655 P PI+ E Sbjct: 864 APQPIDALE 872 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 134/427 (31%), Positives = 230/427 (53%), Gaps = 15/427 (3%) Query: 241 NAMRFPVSDLPNKALLMEMLEQVVARKQTT-----ALMIITCETLRDTAGVLKEAQREIL 295 +A P++DL N+ L+E L+ ++ + + A++ + + + L + L Sbjct: 272 HATHDPLTDLFNRNFLLEKLQNLLEKNKNQSGKSFAILFLDLDDFKVVNDSLGHLAGDQL 331 Query: 296 LLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQ 355 L+ + ++L++ L LA+ G +F ++ ++E AI Q++ + ++ + Q Sbjct: 332 LIMITKRLQNSLGQNHTLARFGGDEFTILLENIKETQDAIIAAQKIHSNLTYPYNLNGQQ 391 Query: 356 LRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 + + SIG+A+ D T ++ A A + ++ +GK F+ Q E A KRL E Sbjct: 392 IFINTSIGIALSSPDYTHPYEILRDADIAMYQSKKQGKGACTLFNQQMHEQAVKRLQMEI 451 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 ++ A+E +F QP +T+GKL+ E L+R Q P I E GL+V Sbjct: 452 ELRQAIEQQEFIAHYQPIFSLTTGKLIGFEALIRWQHSQKGLISPAEFIPIAEETGLIVP 511 Query: 475 VGHWVLEESCRLLAAWQER---GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTL 531 +G W+L E+C L WQE+ +L +SVNLS+ QL P +V ++ ++LT I P L Sbjct: 512 MGKWILLEACTQLKQWQEQYDHEHILQISVNLSSKQLRDPYLVQEIDKILTHTEINPQNL 571 Query: 532 ILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDK 591 +E+TES +++ A+ IL L+ ++ LDDFG GY+ L ++ P+D+LKID+ Sbjct: 572 KIEITESLLMENFDTAMNILLQLQERNTQLCLDDFGTGYSSLS---YLHRFPVDILKIDR 628 Query: 592 MFVEGL-PGDSSM--IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARP 648 FV + G++++ I II LA SLN+++IAEG+ETE+Q L QG+LF++P Sbjct: 629 SFVMQMHSGNNNLEIIRTIITLAHSLNMRVIAEGIETESQLSQLKSLNCEQGQGYLFSKP 688 Query: 649 LPIEIFE 655 +P E+ E Sbjct: 689 VPQEVAE 695 >UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KC5_SACD2 Length = 823 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 128/423 (30%), Positives = 223/423 (52%), Gaps = 20/423 (4%) Query: 246 PVSDLPN----KALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN K L++ L+ A++++ + + L +ILL L Sbjct: 397 PLTHLPNRRYFKDYLVKQLQLAKEEDSIMAVLLVDLDNFKRINDTLGHDAGDILLSVLAG 456 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 ++K L + ++A++ G +F ++ + + ++V ++++ + I+ + S Sbjct: 457 RIKQRLHSQDLVARMGGDEFYLVLRNLSSLAEVEKITKRVRSVLASPIRIKNHFVEITAS 516 Query: 362 IGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IGVA + + T E+L A A + A+ G+N++ +F + + ++ ES + A+ Sbjct: 517 IGVASYPENCDTPEELMRNADIALYKAKGDGRNRVAYFSAELDSQLRDKMRLESKLRQAV 576 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 F I++QPQ + + K AEVL+R + P+ + PD I E G++ + WVL Sbjct: 577 SCEAFEIYIQPQYDYKTSKFRWAEVLIRWEDPEEGFIPPDKFIKLAEETGIINDIDQWVL 636 Query: 481 EESCRLLAAWQERGIML------PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILE 534 +C+L W E G L +S+NLSA Q + A + + Y I P + E Sbjct: 637 RATCKL---WAEHGEALRAIGIEGVSMNLSARQFYSKTLFAYVEAVFEEYGINPSCISFE 693 Query: 535 VTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV 594 +TES I++ A+ + LRN G R+++DDFG GY+ L ++K LPID LKID+ F+ Sbjct: 694 ITESMVIENIEGAIETMERLRNIGSRISIDDFGTGYS---SLSYLKRLPIDSLKIDRSFI 750 Query: 595 EGLPGDSSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 +PGD++ +A AII +A+ LNL +IAEG+ET+ Q ++L + G QG+ FA+P P+ Sbjct: 751 MDIPGDTNDVAITSAIIAMAEKLNLSVIAEGIETKEQCEFLVEQGCFHMQGYYFAKPAPV 810 Query: 652 EIF 654 F Sbjct: 811 RTF 813 >UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LW67_ACIC1 Length = 884 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 144/466 (30%), Positives = 232/466 (49%), Gaps = 21/466 (4%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVARKQ---- 268 + + + + + L Q L Q EQ + F P++ L N+AL E L QV+A+ + Sbjct: 411 NHVSVALENGRLEQSLAQLRELEQKLTQLAFHDPLTGLANRALFSERLSQVLAKAKAEGR 470 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 T A++ I + + L + LL + E++ L P A++ G +FAVI Sbjct: 471 TCAVLFIDLDDFKTVNDTLGHDAGDELLCAVAERITGCLRPSDQPARLGGDEFAVIIEDA 530 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTAR 388 A + ++ + + + +L SIG+A G TA++L A A + A+ Sbjct: 531 LSTQAAERIAARITEQLRAPISVHGCELHIRASIGIATSQGVQTADELLRNADLAMYMAK 590 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 GK + ++F P A R +SD+ A E +F + QP V++ +G+ V+AE L+R Sbjct: 591 ADGKGRYRWFRPSMRTAVVSRHQLKSDLERAAERGEFQVHYQPIVDLRTGRPVAAEALVR 650 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP------LSVN 502 P+ P+ I E G++ +G VL +C + WQ+ P ++VN Sbjct: 651 WVHPERGLLFPETFISEAENSGIINEIGRLVLRHACAHVGGWQQHVERKPGEPPFAVAVN 710 Query: 503 LSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVA 562 LS Q P++VA + E + I P +LILE+TE+ + + L L GVR+A Sbjct: 711 LSPAQFAQPDLVAQIDEAVEAAGIDPNSLILEITETMMLQGSDRVLRTLDLLSGFGVRLA 770 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMI 619 +DDFG GYA L L + LPID++KI K F + + G+ S + A+I L ++L L + Sbjct: 771 MDDFGTGYASLASL---RKLPIDIIKIAKTFTDDITGNEEKSPFVRAMIELGEALGLVTL 827 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPLP---IEIFEESYLEEK 662 AEGVET Q L + G + QG+ FARP+P IE+ + Y E++ Sbjct: 828 AEGVETAQQARELERLGCRLGQGYHFARPVPSAGIELLLQRYAEQQ 873 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 134/412 (32%), Positives = 225/412 (54%), Gaps = 13/412 (3%) Query: 250 LPNKALLMEMLEQVVAR---KQTT-ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS 305 LPN+ L LE+V QT A+M I + ++ L ++LLL + +LK+ Sbjct: 811 LPNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKN 870 Query: 306 VLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 ++ I+A++ G +F V+ + + + + + +++ I+ L SIG++ Sbjct: 871 IMGNDDIVARLGGDEFVVVLSDTDHD-RVAKVAEALRSGLNQTYLIDNKPLHSSPSIGIS 929 Query: 366 MFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 +F D + E L A A + A+ G+N QFF +R E+ + A+ ++ Sbjct: 930 LFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNE 989 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 ++ QPQV+++SG++V E L+R Q P+ PD I E +++ +G WVLE + Sbjct: 990 LLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENAL 1049 Query: 485 RLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 LA W+++G L ++VNLSA QL +VAD++ +LT++++ G L LE+TES + Sbjct: 1050 AQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQY 1109 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV---EGLPGD 600 P +L LR G+ +A+DDFG GY+ L ++K LP+D LK+D+ FV E P D Sbjct: 1110 PEQNAKLLAELRQHGIELAIDDFGTGYS---SLSYLKLLPLDRLKLDRSFVKDIESDPND 1166 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 +++ AA I +A L L ++AEGVE EAQ L+ G + QG+ F++PL + Sbjct: 1167 AAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAAD 1218 >UniRef50_C6WYR4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYR4_METML Length = 681 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 135/416 (32%), Positives = 222/416 (53%), Gaps = 15/416 (3%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L E L Q T A+M I + ++ L + LL + + Sbjct: 257 LTGLPNRLLFNESLHQAQTHANRTSDTIAVMFIDLDRFKNINDTLGHGIGDKLLQQVGNR 316 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLP--IERIQLRPHC 360 + + +A++ G +FAV+ V+E A + ++++ + RLP + ++ Sbjct: 317 ISLCIRESDTVARMGGDEFAVVLVNVREESDAAVVAEKIIDAL--RLPFMVGEHEVFVGA 374 Query: 361 SIGVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 SIG+ + G + L +A A + A+ +G+N QF+ + A +RL E+ + +A Sbjct: 375 SIGITFYRPGQDDRDVLLEKADVAMYHAKERGRNNFQFYSSEMDAVAYERLVMENHLRHA 434 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 L+ +F ++ QPQ+ + G++ + E LLR Q PD P I +E GL+V VG WV Sbjct: 435 LDRKEFILYYQPQIAVDGGRVTAVETLLRWQHPDRGLVAPGEFISLLEESGLIVPVGKWV 494 Query: 480 LEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 L+ SC+ W + G + ++VNLS Q HP +VAD+ E+L + P L LE+TES Sbjct: 495 LKTSCQQGRIWYDAGTPVRVAVNLSVRQFKHPGLVADVAEILAESGLPPELLELELTESM 554 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP- 598 +D V L L+ GV +A+DDFG +G L ++K P+D LKI + FV LP Sbjct: 555 FMDSATGDVNKLTQLKALGVSLAIDDFG---SGASSLAYLKDFPVDTLKICQSFVLNLPH 611 Query: 599 --GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 DS++ +A++ LAQ++N +AEGVE + Q ++L + QGFLF++PLP+E Sbjct: 612 NNDDSAIASAVLGLAQAMNFTSVAEGVENDQQANFLRERRCDYFQGFLFSKPLPVE 667 >UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=A7HQX0_PARL1 Length = 991 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 129/431 (29%), Positives = 230/431 (53%), Gaps = 16/431 (3%) Query: 232 QRHYEEQ-NENAMRFPVSDLPNKALLMEMLEQVVARKQ-----TTALMIITCETLRDTAG 285 Q+H EE+ +++ ++ LPN+AL M+ + + + R+ AL++I + + Sbjct: 549 QKHAEERLMHDSVHDSLTGLPNRALFMDRMSRAIRRRGLLERPRAALLLIDLDRFKTVND 608 Query: 286 VLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIM 345 L + + LL+ + +L+S+++ +A+I G FAV+ E A+ +Q + Sbjct: 609 SLGHSGGDALLIAIARRLESLVTQDDTVARIDGDAFAVLLTTRTEREDALAFAEQASEFL 668 Query: 346 SERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + + + ++ P CS+GVA+ E+L++ A A + A+ GK +I+ F+P Sbjct: 669 RQPIEVAGHEVYPTCSVGVAICEDAHEHPEELFTEAEIAMYRAKRSGKARIELFEPGMRS 728 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 LT E+D+ +A+E + ++ QP + +T G + E L+R P PD + Sbjct: 729 ETDDHLTLETDLRHAIERREMELYYQPIMSLTDGGVRGFEALIRWNHPKEGLLAPDNFVP 788 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGIM---LPLSVNLSALQLMHPNMVADMLELL 521 E G++ +G + L + LA WQ+ M L +SVN+S+ QL+ +++ D+ +L Sbjct: 789 LAEELGVITEIGRFALRAASEELATWQKLFPMERALTVSVNVSSRQLLRHDLIDDVKRVL 848 Query: 522 TRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKS 581 R I+ GTL LEVTES +++P A ++L ++ G ++LDDFG GY+ L LQ Sbjct: 849 NRIDIERGTLKLEVTESLVMENPEFAASMLTRIKALGAGLSLDDFGTGYSSLSYLQR--- 905 Query: 582 LPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVG 638 P D LK+D+ FV G+ D +I +++ LA L ++++AEG E+E+Q LA G Sbjct: 906 FPFDTLKVDRSFVAGMSVDRETPLIIRSMVTLAHDLGMEVVAEGTESESQARDLADMGCD 965 Query: 639 IAQGFLFARPL 649 QG+ F +P+ Sbjct: 966 YGQGYYFGQPM 976 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 139/425 (32%), Positives = 227/425 (53%), Gaps = 26/425 (6%) Query: 250 LPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS 305 LPN+ LL + L +A + ALM + + + L A ++LL+ + ++KS Sbjct: 384 LPNRRLLNDRLAHALAANKRNEDCGALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKS 443 Query: 306 VLSPRMILAQISGYDFAV--------IANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + +A+I G +F V I + Q H + +++ +S + Sbjct: 444 CVREVDTVARIGGDEFVVLLENLGADIKDATQAAAH---IAEKIRASLSTPYQLHDKMHH 500 Query: 358 PHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIGV++ + + +AE+L +A A + A+ G+N ++FFDPQ ++ + ESD+ Sbjct: 501 SSPSIGVSLIHCNGESAEELIKQADMAMYQAKEAGRNAVRFFDPQMQQSVETIAALESDL 560 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 +A+ Q ++ Q Q++ T V AE LLR P P I E L++ +G Sbjct: 561 RHAVHERQLQLFYQIQLDHTHHP-VGAEALLRWIHPVRGMVSPAQFIPFAEESSLILDIG 619 Query: 477 HWVLEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILE 534 HWVL+E+CR +AAW QER L L+VN+SA Q P+ V + ++ ++ IQP L LE Sbjct: 620 HWVLDEACRQIAAWSHQERTRDLVLAVNISARQFKQPDFVEQVGAMIRKHAIQPARLKLE 679 Query: 535 VTESRRIDDPHAAVAILRPLRNA-GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 +TES +++ + + LRN G+ ++LDDFG GY+ L ++K LP+D +KID+ F Sbjct: 680 LTESIALEELDVIITKMHALRNGLGISLSLDDFGTGYSSL---SYLKRLPLDQIKIDQSF 736 Query: 594 VEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 V + GD+ M+ II +A + +++IAEGVET Q L + G + QG+LF RP+P Sbjct: 737 VRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEGVETAGQFFLLKQYGCLLFQGYLFGRPVP 796 Query: 651 IEIFE 655 + FE Sbjct: 797 LREFE 801 >UniRef50_Q7NSJ7 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NSJ7_CHRVO Length = 662 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 134/418 (32%), Positives = 224/418 (53%), Gaps = 8/418 (1%) Query: 247 VSDLPNK----ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ + L+ L+Q + + ALM I + ++ L A + LL+ + + Sbjct: 248 LTGLPNRNGIRSELLPHLQQALRNGRQVALMFIDLDRFKNVNDSLGHACGDELLIRMAGR 307 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L +L A++ G +F V+ + Q A L +++L +S + +E + + SI Sbjct: 308 LVGLLGHDEKAARLGGDEFLVMLSAPQVAERAEALARRILQALSVPMRLEGMDVGVSASI 367 Query: 363 GVAMFYG-DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+++ G +L EQ+ A A + A+ G+N + FF P +Q +L E+DI L+ Sbjct: 368 GISVCEGRELDLEQMMRHADLAMYAAKDAGRNNLMFFTPALEARSQAQLALENDIRRGLD 427 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +F + QP+V++ SG++V AE L R + P +PD I E CG+++ +G +L Sbjct: 428 CGEFIAYFQPRVDIASGRVVGAEALARWRHPQRGLLMPDSFIPMCEDCGMVMELGRQILL 487 Query: 482 ESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 ++ R W++RG+ L +SVNLSA Q + P + + ++L QP L LE+TES + Sbjct: 488 QAARQQRQWRDRGLDLLVSVNLSACQFVDPGLPGQVEQILADSGCQPDRLELEITESVLL 547 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS 601 ++ L+ +R GVR+A+DDFG GY+ L LQ P+ LKID+ F+ L Sbjct: 548 GHDEQTMSTLQAMRALGVRIAVDDFGTGYSNLAYLQR---YPLTSLKIDRSFIADLDDKP 604 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 ++ I L + + L M+AEGVETEAQ WLA+ G QG+L + L + F++ L Sbjct: 605 AIAELITTLCRMMGLNMVAEGVETEAQLAWLAERGCQEYQGYLCSPALSAQEFQQRLL 662 >UniRef50_C6MGV8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGV8_9PROT Length = 813 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 124/412 (30%), Positives = 228/412 (55%), Gaps = 13/412 (3%) Query: 247 VSDLPNKALLMEMLEQVVARKQTTA----LMIITCETLRDTAGVLKEAQREILLLTLVEK 302 +++LPN+ L+M+ L Q +A+ + ++ I + + L + +L + ++ Sbjct: 385 LTNLPNRILIMDRLNQAIAKAARDSSLLGILFIDLDNFKRINDTLGHKHGDSMLCLISQR 444 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 + SVL L ++SG ++ +A V+ I + ++L +S+ + + +++ P CSI Sbjct: 445 ILSVLRQSDTLGRLSGDEYIAVAGNVESYDALIRIAGKILDCISKPVVLSNMEIIPSCSI 504 Query: 363 GVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++++ + + L A +A + A+ G+N F+ P + A LT E ++ +AL Sbjct: 505 GISVYPHHSENPDHLVQMADTAMYEAKKNGRNNYAFYHPGLTQRAAHHLTRERELHHALI 564 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 N +F ++ QPQ + + +++ E L+R + P LP +I E L++ +G+WVL+ Sbjct: 565 NDEFLLYFQPQFSLINKEIIGVEALIRWKHPKRGLLLPAEIIPVAETSRLIIDIGNWVLK 624 Query: 482 ESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+C+ L W+ G+ L +SVN+S QL N+ + +LL +Y + +L LE+TES Sbjct: 625 EACKQLHQWRTDGLDNLRMSVNVSIRQLADNNLQKFIAKLLHQYSLPAHSLELEITES-C 683 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP-- 598 + + ++ L L+ G+ +++DDFG GY+ L L K+LPI LKID+ FV+G+P Sbjct: 684 LQNELIYISCLEQLKKLGILISIDDFGTGYSCLSSL---KNLPIHRLKIDQSFVKGIPLD 740 Query: 599 -GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 D ++ A++ LAQ LNLQ+ AEG+ET Q +L G QG+ ++P+ Sbjct: 741 KNDCAIATAVLALAQKLNLQVTAEGIETYDQITFLLGHGCNELQGYWLSKPV 792 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 136/415 (32%), Positives = 225/415 (54%), Gaps = 12/415 (2%) Query: 247 VSDLPNKALLMEMLEQVVA--RKQTT--ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ L N+ L L+Q +A R+ + A++ + + + L + LL+ + + Sbjct: 584 LTGLLNRLSLKGRLDQALAAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANR 643 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+ + ++A++ G +F ++ +GV+ + ++++ + + I L SI Sbjct: 644 LRDGVRDSDVVARVGGDEFVIMLSGVEHTSAVAMVAEKLVFSVGQSYQIGGYDLYSTPSI 703 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+A++ D + L A +A + A+ G+N QFFD + EAA +RL E + AL Sbjct: 704 GIAIYPTDGEDGDILMKNADAAMYHAKMAGRNNFQFFDAKMNEAALERLNTEHALRRALA 763 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 N +F ++ QP +++ S ++ S E L+R P+ LP I E GL+ +G WVL Sbjct: 764 NQEFCLYYQPVIDLASNRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLW 823 Query: 482 ESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +CR LA + GI + + VN+SA+Q+ + N+ ++ Y I P LI E+TES Sbjct: 824 AACRQLADFAAAGISGIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVA 883 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE--GLP 598 ++ P V IL L GV VA+DDFG GY+ L +++ PI+ LK+D+ FVE G Sbjct: 884 MEQPTETVRILDLLNAMGVSVAIDDFGTGYS---SLSYLRMFPINHLKLDRSFVEQIGEE 940 Query: 599 GDSSMIA-AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 D +I A I LA SL L+++AEGVET+AQ D+L G + QGFLF+RP+P + Sbjct: 941 IDGCVICDATIGLAHSLELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPAD 995 >UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5V4_NITSB Length = 793 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 124/415 (29%), Positives = 228/415 (54%), Gaps = 12/415 (2%) Query: 246 PVSDLPNKALLMEMLEQVVA--RKQTT--ALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ L N+ ++ L++ +A ++++ AL+ I + ++ L + LL V+ Sbjct: 374 PLTKLANRVSFLQTLDEFIALGKRESFPFALLFIDLDNFKEINDTLGHDTGDKLLQAFVK 433 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +LKS+L I A++ G +F V+A G+ P A+ L ++ + L ++ + S Sbjct: 434 RLKSLLREEDIAARLGGDEFVVLAPGISSPSKALELACRLQNAFQQPLMVDDRPITVQMS 493 Query: 362 IGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+A+F D A +L A A + A+ K KN+ F + A +++T + ++ A+ Sbjct: 494 IGIALFPQDAKNANELLKAADIAMYKAKEK-KNRCVLFQENMQQEALEKVTLKQELKKAI 552 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E ++ ++LQP++ + + K+ E L+R P + P I E L++ + W+ Sbjct: 553 EKNELMLYLQPKISVRTKKVEGFEALIRWNHPTRGFIPPSKFIPLAEESALIIPLTEWIF 612 Query: 481 EESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +E RLL Q+ GI P+++N+SA ++ + + + IQ G + LEVTES Sbjct: 613 QEVDRLLDQLQQNGIESPIAINISARHFATDKLIEQITTNIKKEYIQKGLIELEVTESAV 672 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 ++D + A+ L+ L + G++VALDDFG G++ LQ++K LPID +KIDK F++ + D Sbjct: 673 MEDINKAMHYLQKLHSFGIKVALDDFGTGHSS---LQYLKKLPIDTIKIDKTFIDHIIND 729 Query: 601 S---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + +++ + I +A L + +AEGVET+ Q +L K G+ QG+ +A+P+P E Sbjct: 730 NKDQAIVESTIEMADKLGMDTVAEGVETKEQAQFLEKIGIDYIQGYYYAKPMPFE 784 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 127/413 (30%), Positives = 225/413 (54%), Gaps = 13/413 (3%) Query: 246 PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN+ LL ++ R + ALM + + ++ L + LL + Sbjct: 623 PLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQ 682 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +L + + + ++++ G +F ++ G A L +++L I + + IER ++ S Sbjct: 683 RLVNAVREQDTISRLGGDEFVLVLPGTDTD-GAAYLAERLLNIAARQYNIERHEINLTVS 741 Query: 362 IGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+AM+ D T + L+ A +A + A+ G+N FF + + + L ++ + AL Sbjct: 742 IGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYCFFTTEMQARSARTLQIDNALRRAL 801 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E +QF++ QPQ+ + + ++V E L+R P PD I E G ++ +G WVL Sbjct: 802 ERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVL 861 Query: 481 EESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 + + R L WQ+ G+ + +SVNLSA+Q HP + ++ +L + P L LE+TE Sbjct: 862 KTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGV 921 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG 599 +++P AA+ ++ LR G+R+++DDFG GY+ L ++K + LKID+ FV+ LP Sbjct: 922 AMENPLAAITVIDELRKKGIRISIDDFGTGYSS---LTYLKRFNVYSLKIDRSFVQDLPN 978 Query: 600 DS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 D+ ++++A+I LA SL + +AEGVET+ Q ++L G QG+ +RPL Sbjct: 979 DTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPL 1031 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 140/417 (33%), Positives = 225/417 (53%), Gaps = 23/417 (5%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN++LL E + +AR ++ ALM + + ++ L + LL+ + E+ Sbjct: 979 LTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAER 1038 Query: 303 LKSVLSPRMILAQISGYDFAVI-----ANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 L+ + ++++ G +F V+ A+G A + ++L +M+ IE+ +L Sbjct: 1039 LRRAVRDEDTVSRLGGDEFIVVLPSTDADG------AAHVAAKLLEVMAPAYRIEQHELT 1092 Query: 358 PHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 S G+AM+ D + E L A +A + A+ G+N FF + E + + L E+D+ Sbjct: 1093 CSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQERSARNLQIENDL 1152 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 ALEN + + QPQ + +LV AE LLR Q P P I E CGL++ +G Sbjct: 1153 RRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIG 1212 Query: 477 HWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVL + L WQ+ G+ + ++VNLSA+Q ++ + +L + L LE+ Sbjct: 1213 EWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELEL 1272 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES +D+P AA+A + LR GVR+++DDFG GY+ + ++K + LKID+ FV Sbjct: 1273 TESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYS---SMSYLKRFRVHKLKIDRSFVA 1329 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 L P D +++ A I LA+ L LQ IAEGVE+EAQ +L G AQG+LF+RPL Sbjct: 1330 DLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPL 1386 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 143/454 (31%), Positives = 238/454 (52%), Gaps = 20/454 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVV---ARKQTT-A 271 G + R + L +R E+ A ++ LPN+ L + LEQ + R Q++ A Sbjct: 539 GRVTRMIGTHTDLSERKLAEETIRRQANYDSLTQLPNRRLFRDRLEQTIRLAKRDQSSFA 598 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 LM+I + ++ + + LL+ ++++ + +A++ G +F VI V +P Sbjct: 599 LMLIDLDHFKEVNDTMGHDAGDFLLVDAAQRIQHCVRESDTVARMGGDEFVVILPDVNDP 658 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHK 390 + + Q ++T ++ + + SIG+ ++ D + E L A A + A+H Sbjct: 659 DNIERIAQNIITKLAAPFVLGEEKAFISASIGITLYPSDADSMETLLKNADQAMYVAKHL 718 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G+N++ +F P E AQKR+ +D+ +AL ++Q ++ QP VE+ +G + AE L+R Sbjct: 719 GRNRMSYFTPVLQENAQKRMRLVNDLRDALSSNQLRVFYQPIVELATGDIHKAEALIRWL 778 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEES---CRLLAAWQERGIMLPLSVNLSALQ 507 P P I E G+++ +G WVL ++ + L A +G +SVN S +Q Sbjct: 779 HPTRGMVSPSEFIPLAEETGMIIEIGDWVLRQAMHQVKRLQASHHKGFQ--ISVNKSPVQ 836 Query: 508 LMHPN--MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 + N A+ L L + + +L++E+TE +DD L R+AG++VA+DD Sbjct: 837 FHNDNPLKAAEWLGELEQNGLLASSLVVEITEGVLLDDDGNVKDRLLASRDAGIQVAIDD 896 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIA---AIIMLAQSLNLQMIAEG 622 FG GY+ L ++K ID LKID+ FV L S +A AII++A L L++IAEG Sbjct: 897 FGTGYS---SLAYLKKFDIDYLKIDQTFVNNLGNQSDDMALCEAIIVMAHKLGLKVIAEG 953 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 VETE QRD L +AG AQGFLF++ +P E E+ Sbjct: 954 VETEQQRDLLKQAGCDYAQGFLFSKAIPAEELED 987 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 130/420 (30%), Positives = 221/420 (52%), Gaps = 12/420 (2%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVARKQTTA----LMIITCETLRDTAGVLKEAQREILLL 297 A ++ LPN+ L+ + L Q ++ TA ++ + + +D + + LL+ Sbjct: 289 ATHDDLTGLPNRTLMQDRLLQAISYADRTASKLAVVFVDLDKFKDINDSMGHFIGDQLLI 348 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + +L+S + +A+ G +F ++ + + Q+VL + SE IE Sbjct: 349 AMARRLESCIRDSDTVARPGGDEFVLLLSNIHGMDALSQTLQRVLALTSEPCSIEGKDFT 408 Query: 358 PHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG++++ D T+E L A +A + A+ +GKN QF+ + +RL E + Sbjct: 409 VTSSIGISLYPDDGKTSETLLKNADTAMYKAKQEGKNNFQFYTRELNSILVERLEMEYQM 468 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 NAL +++F + QP++ + + ++ E L+R P P+ I E L+ +G Sbjct: 469 RNALGHNEFHLHYQPKLNLRTQRITGVEALIRWHNPRQGLISPNRFIPIAEESSLIEQIG 528 Query: 477 HWVLEESC-RLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVLE++C +A Q G +P+SVN+S Q N+V ++ +L ++P L LE+ Sbjct: 529 SWVLEKACMESIALSQLSGYDVPVSVNVSPRQFQQSNLVGNISRVLQETGLKPSLLELEI 588 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TE D + +L L+ G+++A+DDFG GY+ L L+H PID LKID+ FV Sbjct: 589 TEGTLADTSPQFIKVLNDLKGLGIKLAIDDFGTGYSSLGYLKH---FPIDNLKIDRSFVM 645 Query: 596 GLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 GL D++ ++ AI+ L +L + ++AEGVETE QRD+L G QGFLF++PLP + Sbjct: 646 GLESDTANQAILKAIVALGHNLGINLVAEGVETERQRDFLLSIGCDEMQGFLFSQPLPFD 705 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 135/441 (30%), Positives = 229/441 (51%), Gaps = 15/441 (3%) Query: 226 LNQQLLQRHYEEQNENAMRF--PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCET 279 L +++ +R E+ M + ++ LPN+ L + L Q +A K+ A+M + + Sbjct: 178 LEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDR 237 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRM-ILAQISGYDFAVIANGVQEPWHAITLG 338 + L A + LL+ + ++L++ +A+ G +F + + + + A T+ Sbjct: 238 FKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVA 297 Query: 339 QQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQF 397 Q+++ + I+ +L SIG++++ D + + L A A + A+ +G+N Q Sbjct: 298 QKIIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQL 357 Query: 398 FDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWD 457 F P+ A +RL+ E+D+ ALE +F + QP+V + G++ E L+R Q P Sbjct: 358 FAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLV 417 Query: 458 LPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVAD 516 P I E GL+V +G WVL +C+ AWQ+ G + ++VNLS QL ++ Sbjct: 418 PPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSET 477 Query: 517 MLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQL 576 + +L + PG L++EVTES +DD + R L GVR+++DDFG GY+ L Sbjct: 478 VARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYS---SL 534 Query: 577 QHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLA 633 ++K P+ LKID+ FV + P D ++ A+I +A+ LNL ++AEGVET Q + L Sbjct: 535 HYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLR 594 Query: 634 KAGVGIAQGFLFARPLPIEIF 654 QGFLF+ P P E F Sbjct: 595 ALNCRYMQGFLFSEPAPAEQF 615 >UniRef50_A1SBS3 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1SBS3_SHEAM Length = 709 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 142/460 (30%), Positives = 241/460 (52%), Gaps = 21/460 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRFP--VSDLPNKALLMEMLEQVVA----RKQTTA 271 G +R N L +R E + + ++ L N+ LLME L+ +A KQ A Sbjct: 242 GTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCERSKQIGA 301 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN--GVQ 329 L+II + + + + LL + ++L + ++A++ G +F ++ G+ Sbjct: 302 LLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVIVMENLGID 361 Query: 330 EPWHAI---TLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRAISAAF 385 E A+ ++GQ+V ++++ + QLR SIG+A+F G E+L +A A + Sbjct: 362 ERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLEELLKQADVAMY 421 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ GKN ++FFDP A ++R+ E+D+ N + ++F ++ QPQV+ G+L EV Sbjct: 422 QAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVD-ACGRLCGGEV 480 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNL 503 L+R Q P +P+ I E L++ +G WVL ++C L W+ + + LSVN+ Sbjct: 481 LIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQISLSVNV 540 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S Q+ N V +L ++ P ++LE+TES ++ + + LR GVR ++ Sbjct: 541 SVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRVRGVRFSV 600 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++K P+ LKID+ FV + D+ + II LA+ L L ++A Sbjct: 601 DDFGTGYS---SLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGLGVLA 657 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 EGVETE Q ++L QG+LF +P IE+F S+++ Sbjct: 658 EGVETEDQLNFLLAHDCSYFQGYLFGKPCAIELFASSFMD 697 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 129/441 (29%), Positives = 240/441 (54%), Gaps = 11/441 (2%) Query: 217 IGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR-KQTTALMII 275 +GM++ + N++ R+ E N ++ LPN+ ++ + +V + K AL+ + Sbjct: 224 VGMILFRFVYNKERKARYELEYFAN--HDSLTGLPNRHAYIDKITSMVNKNKNNFALIFM 281 Query: 276 TCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI 335 + + L ++LL + ++LK+ + +L++ G +F + + VQ Sbjct: 282 DLDNFKTINDSLGHTLGDMLLQKVAKRLKNEIKEYDMLSRFGGDEFVFLFSNVQSELTIE 341 Query: 336 TLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQ 394 ++ ++ + + ++ SIG+A++ D AE L A A + A+ G+++ Sbjct: 342 KTMIKIHEVLKKPFILNTYEVYTTASIGIAIYPDDAQDAELLLRNADVAMYDAKQSGRSK 401 Query: 395 IQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDG 454 FF+ + + RL ES++ ALEN++ + QPQV + + K+V E L+R Q P Sbjct: 402 YSFFNADMLNLSSNRLMLESELHKALENNELFLLFQPQVSLWNEKIVGVEALIRWQHPTK 461 Query: 455 SWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNM 513 P I E GL++ +G W+++++C LA W++ + LS+N+SA Q++H ++ Sbjct: 462 GLISPLDFIPIAENSGLIMPIGEWIIDQACDQLALWKDTHMSEATLSINVSAKQVLHQDL 521 Query: 514 VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL 573 + + + R +I L LE+TES +++ + V IL L+ GV +A+DDFG GY+ Sbjct: 522 YSYIEAAIERTKIDGRFLELEITESVIMENINETVRILSRLKKLGVSIAIDDFGTGYSS- 580 Query: 574 RQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIA---AIIMLAQSLNLQMIAEGVETEAQRD 630 L ++K LPID LKID+ F++ +P D IA AII +++SL+L+++AEG ET+ + Sbjct: 581 --LSYLKKLPIDKLKIDREFIKDIPNDKDDIAITNAIISMSKSLSLKIVAEGPETKEHIE 638 Query: 631 WLAKAGVGIAQGFLFARPLPI 651 +L + IAQGF +++P+ I Sbjct: 639 FLQNSKCDIAQGFYYSKPITI 659 >UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains n=1 Tax=Idiomarina loihiensis RepID=Q5QUC0_IDILO Length = 829 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 137/433 (31%), Positives = 232/433 (53%), Gaps = 26/433 (6%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ L N+ L++ L+ +A Q AL++ + + L ++LL + E+ Sbjct: 403 LTGLANRRSLLDHLQDQLATYKEAGQNGALILCDIDKFKILNNTLGSDMGDLLLKRVAER 462 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERL-----PIERIQLR 357 L+S LA++S +FAV+ G+ E +++ + QQ+LT + + L P + Sbjct: 463 LQSSTKANSFLARLSANEFAVVLTGL-ERGNSVNIKQQLLTRIYQLLDQLQQPYQLNSYT 521 Query: 358 PHCSI--GVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 CS G ++F + AE L +++ A ++ KG ++ F + +A KR+ E Sbjct: 522 HLCSFSAGASLFDDSESNAETLMTQSGLALSHSKRKGTGEVSLFRQEFADAVSKRVKLEE 581 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 + NA++ ++F ++LQPQV + S K AE L+R +Q DG + P I E GL+V Sbjct: 582 QLRNAIKQNEFELYLQPQVNIES-KPTGAEALIRWKQSDGRFVSPADFIPLAEETGLIVP 640 Query: 475 VGHWVLEESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 +G+W+ E +C++L WQ+ + LS+N+SA Q P V + L+ +Y I+P L Sbjct: 641 LGYWITERACQILQQWQQSPEKAKMQLSINVSAKQFQQPEFVEQVQLLVEKYEIRPHRLK 700 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 LE+TES +DD + ++ L+ G+ ALDDFG GY+ L ++ +P D LKID Sbjct: 701 LELTESLLMDDISSVTNKIKQLKRLGIEFALDDFGTGYSS---LSYLMQIPFDTLKIDVS 757 Query: 593 FVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 FV + + ++ II L +SL L ++AEGVETE Q ++LA+ QG+LF++P+ Sbjct: 758 FVRNMLDSMEKAQIVYTIIQLGESLKLNIVAEGVETEEQFNYLARLNCDTFQGYLFSKPV 817 Query: 650 PIEIFEESYLEEK 662 P E +L +K Sbjct: 818 P----ESEFLADK 826 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 137/426 (32%), Positives = 225/426 (52%), Gaps = 19/426 (4%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLL 297 A P++ LPN+ LL++ L + + + +AL + + ++ + ++LL Sbjct: 672 AFYDPLTLLPNRRLLLDRLTEAINHSVRTRNFSALFFLDLDNFKNLNDSAGHNKGDLLLG 731 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGV-QEPW----HAITLGQQVLTIMSERLPIE 352 + E+L + + +A++ G +F +IA+ + EP A L Q++++ ++ ++ Sbjct: 732 QVAERLVNSVRQGDTVARLGGDEFVIIASDLSHEPTLAANQAERLAQKIVSNLTREYNLD 791 Query: 353 RIQLRPHCSIGVAMFYG-DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLT 411 + SIGV +F +L E L +A A + A++ G+N +QFFDPQ + R + Sbjct: 792 GLTYNSSASIGVTLFNSENLPKEDLLKQADMAMYKAKYAGRNGVQFFDPQMQVSVSSRAS 851 Query: 412 EESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGL 471 SD+ +A+++ QF ++ Q QV + + EVLLR P+ P I E GL Sbjct: 852 IVSDLYSAIQSQQFVLFYQKQVNHLK-QCIGVEVLLRWIHPEKGMVSPLQFIPLAEETGL 910 Query: 472 MVTVGHWVLEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPG 529 +V +G WVLEE+C LA W + L ++VN+S +Q N V +L L P Sbjct: 911 IVPIGEWVLEEACATLAKWSLESEKQHLSIAVNISVVQFSKDNFVQTVLNALKTSGANPQ 970 Query: 530 TLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKI 589 L LE+TE+ ++ A ++ L+ GV ++DDFG GY+ L ++K LPI+ LKI Sbjct: 971 LLKLEITETLLANNIPDVKAKMKELQQHGVTFSIDDFGTGYSSL---SYLKQLPINQLKI 1027 Query: 590 DKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFA 646 D+ FV + D ++ A+I LA S+ LQ+IAEGVETEAQR L G QG+L+ Sbjct: 1028 DQGFVRDIINSSNDRAIAQAVITLADSIELQVIAEGVETEAQRALLQSMGCHTYQGYLYG 1087 Query: 647 RPLPIE 652 +P IE Sbjct: 1088 KPCRIE 1093 >UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C313CD Length = 763 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 145/432 (33%), Positives = 231/432 (53%), Gaps = 15/432 (3%) Query: 232 QRHYEEQ-NENAMRFPVSDLPNKALLMEMLEQVV--ARKQTT--ALMIITCETLRDTAGV 286 ++ +E+Q A P++ LPN+ALL + L++ + AR+ + A++ + + + Sbjct: 316 RKQFEQQLAHQAHHDPLTGLPNRALLTKRLQEALDLAREHDSGVAVIFVDLDNFKVINDS 375 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL + E+L+ VL P +LA+ G + AV V + A + ++ T + Sbjct: 376 LGHDAGDRLLRNVSERLRRVLRPEDLLARFGGDELAVCLERVADTEPANRIADRMATALR 435 Query: 347 ERLPIERIQLRPHCSIGVAMFYG---DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQM 403 ++ Q S G+A+ D + + L A +A + A+ +GK + + FD Sbjct: 436 APFVLDGEQRFVTASFGIALARPEDPDRSPDTLLRDADAAMYRAKERGKARTEIFDASMR 495 Query: 404 EAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLI 463 A RL ES + AL +Q + QP+V + SG++V+ E LLR + P P I Sbjct: 496 RRAVDRLELESGLREALARNQLRVVYQPEVSLESGRIVAVEALLRWEHPQHGPISPARFI 555 Query: 464 DRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELL 521 E GL+V +G WVL E+CR A W + G + ++VNLS QL ++ A + + Sbjct: 556 PIAEQSGLIVPIGAWVLREACRQAAHWNAESGGDGVVVAVNLSVRQLGASDLEATVRGAI 615 Query: 522 TRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKS 581 R+ L LE+TES + DP AA+ L+ L+ GV++A+DDFG+GY+ L L+ + Sbjct: 616 DGARLPADRLCLEITESAVMADPAAAIESLQTLKRVGVKLAIDDFGVGYSSLSHLREL-- 673 Query: 582 LPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVG 638 LPIDVLKID+ F++G+ D +++ AI+ LA+SL + +AEGVET Q L Sbjct: 674 LPIDVLKIDRSFIDGVVLREEDRAIVTAIVQLARSLGVDAVAEGVETSDQAAALRAMHCP 733 Query: 639 IAQGFLFARPLP 650 IAQGF FARP P Sbjct: 734 IAQGFHFARPQP 745 >UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XQ65_SYNP2 Length = 570 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 152/535 (28%), Positives = 277/535 (51%), Gaps = 49/535 (9%) Query: 148 MYKFVMSTLST-----LVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELV 202 Y ++TLST ++ + LL +LI T + + +L+L P+ A+ L K L Sbjct: 50 FYSISVTTLSTDTKIRVLVVALLATLIGTAVTLFTLQKLLL-PISVTAKGLR----KYLE 104 Query: 203 GHQLALPRLHQDDEIGMLVRS--YNLNQ--QLLQ--RHYEEQNENAMRFPVSDLPN---- 252 +Q+ H DE+G+L+ Y +++ +L++ ++Y+ + LPN Sbjct: 105 NNQIPKLPTHFQDEVGVLMADTLYTISKLDELIEQLKNYDH---------TTSLPNLHLF 155 Query: 253 KALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 +ALL + + R Q+ A++ + + + L ++L T+ ++L + + Sbjct: 156 QALLQKEIYNAQCRNQSLAVLFLDLDNFTNINTHLGRDYGNLILRTIAQQLTQAIGDNDL 215 Query: 313 LAQISGYDFAVIANGVQEPWHAITL------GQQVLTIMSERLPIERIQLRPHCSIGVAM 366 LA+I+ FA+I P H I+L Q++LTI+++++ ++ + ++G+ + Sbjct: 216 LAKINTDTFAIIY-----P-HLISLEDLEKYSQKLLTIINQKVTVKHEDIYLSATMGITV 269 Query: 367 F-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + G + +++ ++A +A A+ +G+N +F+ + E + R E D+ ALE + Sbjct: 270 YDEGKVEPQEIINQAETALNLAKEEGRNIYRFYSVETNEKLRSRFQLERDLYRALEREEL 329 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QPQ+++ +G + AE LLR + + + P I E L++ + WVL+ +C Sbjct: 330 ELFYQPQIDVKTGNITGAEALLRWRHHEHGFISPGIFIPIAEASDLIINISDWVLKTACY 389 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 W + G L ++VNLS Q P +V D+ ++L ++P L LE+TE I++ Sbjct: 390 QNQQWTKDGFPELCVAVNLSGKQFQQPQLVDDVSKILKETSLKPSQLELEITEGLLINNI 449 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMI 604 AV L L N G+ ALDDFG G++ L ++K +D LKID+ FV G+P D + Sbjct: 450 QNAVKTLEDLHNLGLITALDDFGTGFSS---LSYLKRFSLDYLKIDQSFVRGIPLDKDDV 506 Query: 605 A---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 A +II LA SL +++IAEGVET Q ++L G QG+ ++RP+ + F E Sbjct: 507 AITNSIIALAHSLQIEVIAEGVETIEQVNYLKSVGCNKLQGYYYSRPICAKDFAE 561 >UniRef50_Q55434 Phytochrome-like protein cph2 n=1 Tax=Synechocystis sp. PCC 6803 RepID=PHY2_SYNY3 Length = 1276 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 145/421 (34%), Positives = 217/421 (51%), Gaps = 18/421 (4%) Query: 246 PVSDLPN-----KALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV 300 P++ LPN + L + +L+ + K +++I + + + LL + Sbjct: 435 PLTQLPNWIIFNRQLTLALLDALYEGK-MVGVLVIAMDRFKRINESFGHKTGDGLLQEVA 493 Query: 301 EKLKSVLSP----RMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQL 356 ++L LSP +L++ G F ++ + + I L +++L+ E ++ + Sbjct: 494 DRLNQKLSPLAAYSPLLSRWHGDGFTILLTQISDNQEMIPLCERLLSTFQEPFFLQGQPI 553 Query: 357 RPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 S+G++ Y TAE L A A A+ +GKN QF+ PQ RLT ESD Sbjct: 554 YLTASMGISTAPYDGETAESLLKFAEIALTRAKCQGKNTYQFYRPQDSAPMLDRLTLESD 613 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 + AL N +F ++ QPQV + +GKL+ E L+R Q P PD I E GL+ + Sbjct: 614 LRQALTNQEFVLYFQPQVALDTGKLLGVEALVRWQHPRLGQVAPDVFIPLAEELGLINHL 673 Query: 476 GHWVLEESCRLLAA-WQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILE 534 G WVLE +C ++E G L ++VN+SA Q + +LE L R + P L LE Sbjct: 674 GQWVLETACATHQHFFRETGRRLRMAVNISARQFQDEKWLNSVLECLKRTGMPPEDLELE 733 Query: 535 VTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV 594 +TES ++D V +L LR GV+VA+DDFG GY+ L L K LPI LKIDK FV Sbjct: 734 ITESLMMEDIKGTVVLLHRLREEGVQVAIDDFGTGYSSLSIL---KQLPIHRLKIDKSFV 790 Query: 595 EGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 L D+++I +I LA LNL+ +AEG+E+EAQ L K G + QG+ RPLP Sbjct: 791 NDLLNEGADTAIIQYVIDLANGLNLETVAEGIESEAQLQRLQKMGCHLGQGYFLTRPLPA 850 Query: 652 E 652 E Sbjct: 851 E 851 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 138/452 (30%), Positives = 235/452 (51%), Gaps = 15/452 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEMLEQVVARKQ---- 268 D+ G + R L + +R E+ A ++ LPN+ + + LEQ + Sbjct: 473 DDDGAIYRHVALFTDITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGL 532 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 + AL++I + ++ L + +ILL+ ++ + + +A++ G +F VI + + Sbjct: 533 SMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSEL 592 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTA 387 ++ + Q +L ++E ++ SIG++++ D T + L+ A A + A Sbjct: 593 EDMASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYVA 652 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 ++ G+N+ +F EAAQ R+ +D+ A+ QF ++ QP VEM+SG++ AE L+ Sbjct: 653 KYAGRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALI 712 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSAL 506 R Q P P I E GL+V +G WV ++ + + W+ + +SVN S + Sbjct: 713 RWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQISVNKSPV 772 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q H ++ E L + + ++I+E+TE +D L R+AG++VA+DDF Sbjct: 773 QFRHAESLS-WPEYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAIDDF 831 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-PG--DSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K ID LKID+ FV L PG D ++ AII++A L ++IAEGV Sbjct: 832 GTGYS---SLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGV 888 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 ET Q + LA AG QG+L++RPLP E FE Sbjct: 889 ETSTQHELLAAAGCDYGQGYLYSRPLPPEEFE 920 >UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3Y1_LEPCP Length = 730 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 146/449 (32%), Positives = 242/449 (53%), Gaps = 14/449 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA--RKQTTAL 272 DE+G+L ++ + +Q L R E A R ++ L N+ L + L+Q +A R+Q AL Sbjct: 254 DEVGVLTQAMDDMRQNLARREARIAELAYRDDLTGLANRTLFNDRLDQALASARRQGNAL 313 Query: 273 --MIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL-SPRMILAQISGYDFAVIANGVQ 329 +++ + + VL + +L + E+L++ L +A+++G +FAV+ Q Sbjct: 314 SVLVLDLDRFKQVNDVLGHTLGDQVLKEVGERLRNALMRTTDTVARLAGDEFAVLLP-TQ 372 Query: 330 EPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRAISAAFTAR 388 + A LG+++L+++ +P++ ++ SIG+A L+A QL +RA A A+ Sbjct: 373 DHAAATALGRRLLSVLESPVPVQGQRVDVSASIGIACADDAGLSAAQLMARADIAMHEAK 432 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 +G + F+ + LT SD+ A + H+F + QP++ ++ G +AEVL+R Sbjct: 433 -QGNRGLLVFEAAMERHVEHGLTLLSDLRRAADQHEFFLLYQPKLRLSDGHCDAAEVLIR 491 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL 508 + P PD I E G + + WVL+ + LA+WQ+ G L L++N+S L Sbjct: 492 WRHPQRGIVPPDRFIPFAEQTGAIKAITLWVLQHALNQLASWQQLGWQLSLNINVSTRDL 551 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 P+ A + L R + +L LEVTES +DDP A+ L+ L GVR+++DDFG Sbjct: 552 GQPDFPALVDNALRRAGVAAASLCLEVTESAIMDDPAQALRCLQALNEMGVRLSIDDFGT 611 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVET 625 GY+ L ++K LP+ LKID+ FV GL D +++ + I LA + L ++AEG+ET Sbjct: 612 GYS---SLAYLKKLPVQELKIDRSFVSGLDRDEADVTIVRSTIDLAHHMGLAVVAEGIET 668 Query: 626 EAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 EA L G AQG+L++RPLP F Sbjct: 669 EAVSQRLRSFGCDQAQGYLYSRPLPAMEF 697 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 135/452 (29%), Positives = 240/452 (53%), Gaps = 21/452 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQ-NENAMRFPVSDLPNKALLMEMLEQVV--ARKQTT--AL 272 G++V ++ ++ L YEE+ ++ ++ LPN+ +L LE + A+ + T AL Sbjct: 129 GIIVNYRDITERKL---YEEEIHQLVYHDNLTGLPNQYMLDSFLESEIYKAKYECTRLAL 185 Query: 273 MIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPW 332 +II + + + + LL + ++L S++S +L + G +F ++ +++ Sbjct: 186 LIIDLDRFKVINDSIGHTIGDQLLKEVGKRLVSIVSKSDLLVRKGGDEFVIVLPSIKKD- 244 Query: 333 HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKG 391 + + ++ +++ I+ + SIGV++F D T + LY A A + A+ G Sbjct: 245 QVLKVVDNIINLLTSPFKIKSYDIFTSPSIGVSIFPEDGKTKDLLYKHAEFAMYQAKKSG 304 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 Q FF + T E ++ A+E QF + QP++ +++G+L+ E L+R + Sbjct: 305 NGQYHFFSSAEFNGDMNPYTIEVELRKAIEQKQFTLHYQPRINLSTGELIGVEALIRWEH 364 Query: 452 PDGSWDL--PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLM 509 P W L P I E GL+V +G+WVLEE+C+ WQ G+ +SVNLS Q Sbjct: 365 P--KWGLISPASFIPIAEDSGLIVPIGNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFA 422 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 H N+ + + L + P L +E+TES D VA L ++ G++V++DDFG G Sbjct: 423 HTNLASVIKNTLFNTGLDPHLLEIEITESMTADITR-TVATLEEIKKLGIQVSIDDFGTG 481 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETE 626 ++ L ++K P++ LKID+ FV L P + +++ II +A++LNL ++AEG+ET+ Sbjct: 482 FSSLY---YLKKFPVNTLKIDRSFVSELHNNPDEETIVKTIISMARNLNLNVVAEGIETK 538 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 Q +L + QGFLF++PLP + EE + Sbjct: 539 EQLAFLQQHLCHEGQGFLFSKPLPPSVLEEKF 570 >UniRef50_UPI0001698B39 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B39 Length = 622 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 126/417 (30%), Positives = 220/417 (52%), Gaps = 12/417 (2%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L + L + R + AL+ + + + + LL + + Sbjct: 203 LTGLPNRLLFHDRLNHALNRANRSKIGLALLFLDLDRFKQINDAFGHPMGDRLLALVAKD 262 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L L +A++ G +F VI GV H I + +++L ++ ++ +Q+ SI Sbjct: 263 LLEALREEDTIARLGGDEFVVILEGVHGRDHVINVAEKLLAVIGRERSLDSLQMHIGVSI 322 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++++ D L A +A + A+ KG+N F+ P E + E + A+E Sbjct: 323 GISLYPEDGEDVTTLVRNADAAMYQAKAKGRNGYAFYTPMLTEVLEASFELERAMRQAVE 382 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 QF + QPQV++ SG +V EVLLR Q P+ LP+ I E GL++ +G W++ Sbjct: 383 QEQFLLLYQPQVDVESGDIVGVEVLLRWQHPELGLMLPEQFISLAEESGLILPLGRWLVR 442 Query: 482 ESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 ++ + + WQ G+ + LS+N+S QL +++ ELL ++ + PG + LEVTE+ Sbjct: 443 QALQQASQWQLDGLRPVRLSINISNHQLADVQFASELGELLGQFGLDPGLIELEVTENSC 502 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG- 599 ++ + L ++ GV++A+DDFG GY+ L ++K P+D LK+D+ F+ L G Sbjct: 503 AENLEILIEHLESIKALGVQIAIDDFGTGYS---SLSYLKQFPVDTLKVDRTFIHDLIGS 559 Query: 600 --DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 + +++ A+I+L +SL LQ+I+EGVE A+ WL G QGFL ++P+ E F Sbjct: 560 MENQAIVRAMIVLGRSLGLQVISEGVEQSAELAWLRAEGCDTYQGFLHSQPMSAEAF 616 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 135/425 (31%), Positives = 230/425 (54%), Gaps = 17/425 (4%) Query: 242 AMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLL 297 A P+++LPN+ L Q + + ALM+I + ++ L + LL Sbjct: 147 AYHDPLTNLPNRLAFESQLAQALRGCERDNRQLALMLIDLDNFKNINDTLGHHVGDELLQ 206 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + +L+ + ++A+I G +F ++ ++ P A + +V M++ I L Sbjct: 207 KVALRLRESVRSSDLVARIGGDEFVIVLPEIESPLTAARVANKVQQNMADSYRIADHALY 266 Query: 358 PHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG+++F D + A L A +A + A+ G+N QF+ + EAA +RL E+++ Sbjct: 267 ATPSIGISLFPIDGSDANTLLRNADTAMYHAKDAGRNNHQFYTARMNEAAGERLHMENEL 326 Query: 417 LNALE-----NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGL 471 A+ + +F++ QPQV+ +G++ E LLR P P I E GL Sbjct: 327 RQAISAISPGDSEFSLHFQPQVQTATGQVFGLEALLRWNNPIFGQVSPMRFIAIAEETGL 386 Query: 472 MVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGT 530 + +G WV+ E+CRL+ ++ GI + +++N+SA QL H N++ + L+ Y ++P Sbjct: 387 IQPLGDWVIWETCRLIRQMKQHGIEDIRIAINISAQQLRHENLLLLVRGALSCYDLRPED 446 Query: 531 LILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKID 590 + LE+TES + +P ++IL L G+ +A+DDFG GY+ L L+H LPI LK+D Sbjct: 447 IELEITESTAMQNPETTLSILDQLAAMGIVLAIDDFGTGYSSLAYLKH---LPIQRLKLD 503 Query: 591 KMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFAR 647 + FV+ + D+++ A I L SL L+++AEGVETEAQR +LA G QG+L+++ Sbjct: 504 RSFVKDIEIDANDAAICTATIALGHSLGLELVAEGVETEAQRAFLASLGCDTLQGYLYSK 563 Query: 648 PLPIE 652 P+P E Sbjct: 564 PMPFE 568 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 131/415 (31%), Positives = 221/415 (53%), Gaps = 16/415 (3%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN++ E L Q + R Q A+M++ + + L + + L++ L ++ Sbjct: 292 LTGLPNRSFFQEDLAQAILRAQRANKYLAVMLVDLDQFKKINDTLTHSAGDQLVVALTKR 351 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 ++L + +A+ G +F ++ + I + +++ M + + ++ CSI Sbjct: 352 FNTLLENEISIARAGGDEFMMLLENPESVDEVIAIANRIMACMKQPFTLNDEEVFITCSI 411 Query: 363 GVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+A++ G ++AE L A +A + A+ G+N F+ A KRL + + A+E Sbjct: 412 GIAVYPEGGVSAEDLIRNADAALYRAKAAGRNGYHFYTTGMHAEALKRLELDRWLREAIE 471 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++ ++ QP+V + + AEVLLR +P+ + P I E GL+ +G WV+ Sbjct: 472 RNELSLAFQPKVNLKTRDYTGAEVLLRWYRPEQGFISPAEFIPLAEETGLIKELGMWVVR 531 Query: 482 ESCRLLAAWQERGIMLP---LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 +C+ L+ W RG L L++NLSA+QL +V + LL + + P L E+TE Sbjct: 532 RACQQLSEW--RGTPLSHIRLAINLSAIQLEDKELVHKIDNLLREFDVPPRQLEFELTEE 589 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 I + + +A L L G R+++DDFG+GY+ L L+H PI +KID+ FV L Sbjct: 590 VFIQNIESNMAHLNELIKMGFRLSIDDFGVGYSSLAYLKH---FPISCIKIDRSFVSQLE 646 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 D +I A+I +A +LNL ++AEGVETEAQ +L K G AQG+LFA+PLP Sbjct: 647 TNADDRVIINAVIAMAHNLNLSVVAEGVETEAQAAYLQKQGCDEAQGYLFAKPLP 701 >UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q7Q8_SULNB Length = 656 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 121/426 (28%), Positives = 237/426 (55%), Gaps = 14/426 (3%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L + L+ + + + A++ + + ++ L + +L L + Sbjct: 234 LTKLPNRVLFYDRLKHSIDKSKRNNTKLAVLFLDLDNFKEINDSLGHHVGDNVLKILATR 293 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+ L LA++ G +F ++ +++ + + Q ++ ++S+ + I+ L S+ Sbjct: 294 LQKRLRKSDTLARLGGDEFTLLLEDLEDLSNIGEISQSLIQVISKPIKIKEHTLYVTVSL 353 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++++ D E L A +A ++A+++G N F+ + A +R+T E+ I +AL+ Sbjct: 354 GISIYPDDGQDTESLLKCADAAMYSAKNEGCNLFHFYKQEMTVKALERITFETSIRHALD 413 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 N +F ++ QP +++ + +L+ E LLR Q + PD I E +++ +G VLE Sbjct: 414 NDEFIVYYQPLIDIRTNQLIGLEALLRWQHSEKGLLSPDKFIHIAETSSIIIQIGERVLE 473 Query: 482 ESCRLLAAWQERGIMLP--LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 + L W E+G P ++VNLS QL H +++ + ++L + + +P L LE+TES Sbjct: 474 DVAAQLEIWHEKGFN-PERIAVNLSVKQLRHHGLISIISDILEKTKFRPKWLELEITESY 532 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 + P A+ +L +++ GV + +DDFG GY+ L ++K +P++ LKID+ F++ + Sbjct: 533 TMQKPVQAIRLLNQIKDLGVDLTIDDFGTGYSS---LSYLKKIPVNKLKIDRAFIKDITE 589 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D ++++AI+ +A+S+NL ++AEGVETE QR L G QG+LF++P+ + E+ Sbjct: 590 NKDDKALVSAILSMAKSMNLDVVAEGVETEEQRQCLEALGCYKIQGYLFSKPMSVSDIEK 649 Query: 657 SYLEEK 662 Y+E K Sbjct: 650 KYIENK 655 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 133/426 (31%), Positives = 231/426 (54%), Gaps = 25/426 (5%) Query: 241 NAMRFPVSDLPNKALLMEMLEQVVARKQTT-----ALMIITCET---LRDTAGVLKEAQR 292 +A+ ++ LPN+ALLM+ L Q + R++ A++ + + L D+ G L Q Sbjct: 464 DALHDSLTGLPNRALLMDRLTQAINREKGRFYTHFAVLFLDVDRFKLLNDSLGHLVGDQ- 522 Query: 293 EILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIE 352 LL++ LK + +A++ G +F ++ + E AI + Q++ I+S I+ Sbjct: 523 --LLISFANCLKKIRRFTDTIARLGGDEFVILLEDLSEVGQAIKVAQRINEILSSSFLID 580 Query: 353 RIQLRPHCSIGVAMFYGDLTAE---QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKR 409 ++ SIG+A + + + E Q+ A +A + A++ G+ + Q FD A K+ Sbjct: 581 DQEIFITASIGIA--FSNSSYEHPSQILRDADTAMYYAKNNGRGKYQVFDSSMHIHALKQ 638 Query: 410 LTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECC 469 L E+D+ A+E + ++ QP + + +G L+ E L+R Q P P I E Sbjct: 639 LQLENDLRRAIERDELVVYYQPIICLKNGTLIGVEALVRWQHPQEGMISPAEFIPIAEET 698 Query: 470 GLMVTVGHWVLEESCRLLAAWQERGI---MLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL++ + WVL +C+ + WQE+ + LSVNLS Q P+++ ++ +LT+ ++ Sbjct: 699 GLIIELDQWVLNTACQQMRFWQEKYSDFKSITLSVNLSGRQFSQPDLIKNIDNILTQNKL 758 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 + L LE+TE+ I++P++A +L L V V LDDFG GY+ L ++ P+DV Sbjct: 759 EKQYLKLEITETVLIENPNSAAEMLEQLIERKVTVCLDDFGTGYSS---LGYLHRFPLDV 815 Query: 587 LKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKID+ FV + +S++I II LA+ L +++IAEG+ETE QR++L G QG+ Sbjct: 816 LKIDRSFVSNIETNTSNSTIIRTIITLARELEIEVIAEGIETEQQREFLQSLGCHYGQGY 875 Query: 644 LFARPL 649 F+ P+ Sbjct: 876 WFSPPV 881 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 130/418 (31%), Positives = 225/418 (53%), Gaps = 26/418 (6%) Query: 247 VSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 +++LPN+ L E L + + + + +M I + ++ L + ++LL + + Sbjct: 390 LTNLPNRTLFHEKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANR 449 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L L ++++ G +FA+ GV A + Q+++T MSE + ++ I++ SI Sbjct: 450 LICCLRKEDSVSRLGGDEFAIFLTGVTHR-EAGEIAQRIITSMSESITLDHIEIFITPSI 508 Query: 363 GVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++M+ D E L A +A + A+ +GKN QFF + + K+L E ++ AL+ Sbjct: 509 GISMYPDDGDDIEALLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALD 568 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPD-GLIDRI------ECCGLMVT 474 QF + QP++ + +G+++ E L+R WD PD GLI I E GL+V Sbjct: 569 EKQFTLHYQPKIHLQTGQIIGMEALIR-------WDHPDLGLIPPIQFIPIAEETGLIVP 621 Query: 475 VGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 +G WV+ +C+ AWQE G L ++VN+S Q M N++ + +L + P L L Sbjct: 622 LGEWVMRTACQQTKAWQEAGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLEL 681 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TES ++ + + IL L+ GV +++DDFG GY+ L ++ PID LKID+ F Sbjct: 682 EITESMALNVDY-TIRILNRLKALGVSISIDDFGTGYSS---LSYLSQFPIDRLKIDQSF 737 Query: 594 VEGL-PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 + L P + ++I II +A ++ + +IAEGVET D+L + QG+ +++PLP Sbjct: 738 LRNLNPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLP 795 >UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LR02_DESBD Length = 1158 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 137/433 (31%), Positives = 226/433 (52%), Gaps = 15/433 (3%) Query: 232 QRHYEEQ-NENAMRFPVSDLPNKALLMEMLEQVVARKQTT-----ALMIITCETLRDTAG 285 +++YE Q A+R ++ LPN+ L M+ L + + R+Q A+++I ++ + Sbjct: 714 RKNYEAQLTRQALRDNLTGLPNRVLFMDRLNRAMTRQQRNGEYRFAVLMIDLDSFKRVND 773 Query: 286 VLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIM 345 L + LL + +L L +A++ G +FAV+ Q AI + +++L + Sbjct: 774 TLGHQAGDHLLQEVAARLTHCLRTMDTVARMGGDEFAVLLEDFQNNHEAIGITRRLLDTI 833 Query: 346 SERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + L I+ + S+GV + T+ L A + + ++ GKNQ + F E Sbjct: 834 RQPLKIQDRDVLVSASVGVVLQTARYTSPNDLLRDADISMYRSKELGKNQFKVFSKSMYE 893 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 + + E+D+ AL +F ++ QP ++ KL E L+R P P I Sbjct: 894 QVVQTVQLENDLRQALVEDEFELFFQPIYALSGQKLRGFEALIRWNHPQRGHLPPGEFIP 953 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQER--GIMLPLSVNLSALQLMHPNMVADMLELLT 522 E GL+ +G WV+ CR+LA WQ + G+ + LS+NLS L+ ++V + ELL Sbjct: 954 VAEETGLVTEIGKWVMRRGCRVLAGWQSQFPGLDISLSLNLSPKDLLQASLVPVLTELLH 1013 Query: 523 RYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSL 582 + L LE+TE+ +D+P A + L L+ G ++A+DDFG GY+ L LQ L Sbjct: 1014 ETGLDARHLKLEITETAVMDNPEQATSRLERLQKMGFQIAMDDFGTGYSSLSYLQR---L 1070 Query: 583 PIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGI 639 PID+LKID+ FV+ + P + +I AII L + L+L+++AEGVET Q + L + G + Sbjct: 1071 PIDILKIDRSFVQTMLENPNNLEIIKAIIGLGKILDLRIVAEGVETRQQLETLQELGCDL 1130 Query: 640 AQGFLFARPLPIE 652 AQGFL RP+ E Sbjct: 1131 AQGFLLGRPMSKE 1143 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 143/441 (32%), Positives = 226/441 (51%), Gaps = 26/441 (5%) Query: 234 HYEEQNEN----AMRFPVSDLPNKALLMEMLEQ--VVARKQTTALMIITCE-----TLRD 282 HY+E A ++ LPN+ L LEQ ++A++ + L ++ + T+ D Sbjct: 253 HYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIAKRMSEQLAVVFLDLDRFKTIND 312 Query: 283 TAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVL 342 T G + LL+ + ++LK+ + ++A++ G +F +I G P A + +++ Sbjct: 313 TLG---HPVGDDLLIQVADRLKTSVRQYDMVARLGGDEFVMILRGHDMPSVASAVAEKIR 369 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +++ I + LR SIG+A++ G+ + L A +A + + +G N FF Sbjct: 370 LHLNQPFQIGQHTLRTATSIGIALYPGNGERMDDLMKHADTAMYFTKSEGGNGFCFFSSD 429 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 A ++L E+ + ALEN QF ++ QPQ+ + +++ AEVLLR P+ + P Sbjct: 430 MNLHAHEKLELENLLHGALENQQFELYYQPQLSLPEQQVIGAEVLLRWHHPEKGFISPAV 489 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLEL 520 I E + +G WVLE +CR + W G+ LP + VN+S Q N+ + + Sbjct: 490 FIPLAEATNQIGAIGEWVLENACRQASQWLRDGLPLPRIGVNVSGRQFQDKNLFTLVKRV 549 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L + L LE+TE+ P A +L+ LR G+ VALDDFG GY+ L QL + Sbjct: 550 LAETGLPADRLELEITETAVTASPDEAARLLQSLRECGIMVALDDFGQGYSSLGQL---R 606 Query: 581 SLPIDVLKIDKMFVE------GLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 LPID LKID FV G PG ++ AA I L +L +IAEGVET+AQ +L Sbjct: 607 DLPIDRLKIDAAFVRDITDEPGHPG-GAIAAATIGLGHNLGFSVIAEGVETQAQLSFLMA 665 Query: 635 AGVGIAQGFLFARPLPIEIFE 655 G QG+ FA+P+P E FE Sbjct: 666 HGCDEVQGYYFAKPMPREQFE 686 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 141/427 (33%), Positives = 218/427 (51%), Gaps = 18/427 (4%) Query: 248 SDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQR----EILLLTLVEKL 303 + LPN+++L++ L Q + R + D + E + LL + ++L Sbjct: 533 TGLPNRSVLIDRLNQAIYRALFNNSSLALLSLTLDRFKKINETMGHHVGDCLLQEIAQRL 592 Query: 304 KSVLSPRMILAQISGYDFAVIANGVQEPWHAI-TLGQQVLTIMSERLPIERIQLRPHCSI 362 K + LA+ SG F ++ G +P + +VLT + + +L P SI Sbjct: 593 KKLTCDHSSLAKDSGSQFFLLIEG--DPKEVVFDFADEVLTEVKQSFFANGQELIPSGSI 650 Query: 363 GVAMFYGDL--TAEQLYSRA-ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 G+A FY D A +L +RA ++ + G + +DP+ E A + L E+D+ +A Sbjct: 651 GIA-FYPDHAENATELLARADVAMRLSKDDMGGGAVMVYDPKYGEVAPQSLRMEADLKHA 709 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 LEN+Q + QPQ ++ + LV E L+R P P I E GL+ +G WV Sbjct: 710 LENNQLHLHYQPQFDLKNAGLVGVEALIRWNHPTEGPVSPGEFIPLAEETGLIHPLGRWV 769 Query: 480 LEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 L E+CR WQ ++P++VN+S+LQL N V + E L ++I P + LE+TES Sbjct: 770 LREACRQAKFWQNNFARIVPVAVNVSSLQLKKNNFVHVLEECLNEFQIDPQLIELEITES 829 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV---E 595 +D ++ +L ++ G +A+DDFG GY+ L ++K P LKID+ FV E Sbjct: 830 AVMDRLEKSMELLNAIKGLGFNLAIDDFGTGYSS---LSYLKKFPFSKLKIDRSFVMDLE 886 Query: 596 GLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D+++I AII +A SL L+ IAEGVET Q+ +L G QGFL +RPL + E Sbjct: 887 TDENDAAIITAIISMATSLGLKTIAEGVETVEQKHFLTDHGCDEVQGFLLSRPLSADAIE 946 Query: 656 ESYLEEK 662 E YL K Sbjct: 947 EMYLSSK 953 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 160/554 (28%), Positives = 282/554 (50%), Gaps = 54/554 (9%) Query: 151 FVMSTLSTLVTIYLLLSLILTVAISWCINRL-----------ILHPLR--------NIAR 191 +V++ T + L+LSL LT I+ I+RL + P++ IA Sbjct: 194 WVVAACVTFAVLCLMLSLSLTRRITSPISRLAKLADGIASGKLEEPVKVTGGGEVEEIAA 253 Query: 192 ELNAIPA------KEL-VGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMR 244 LN + KE+ V HQL ++ + + R+ LN + Q + M Sbjct: 254 ILNGVITGISNYKKEMDVDHQLLSMKVEERTS-QLSKRNQELNTAVKQVTRTKNRLRKMA 312 Query: 245 F--PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLT 298 + ++ LPN+ L E L ++ KQT AL+ + + + L + ++LL Sbjct: 313 YYDALTSLPNRRLFTEQLSLLLKLAQRNKQTLALLFLDLDNFKRINDSLGHSAGDLLLRE 372 Query: 299 LVEKLKSVL------------SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 + ++L + + ++ ++++ G +F V+ N + P + ++++ +S Sbjct: 373 VGQRLSKCVRDSDVVAHYADPTAKIDVSRLGGDEFTVVLNDLDAPESVGVVAERLILALS 432 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 E + I+ +L SIG+A+ E L + +A + A+ GK+ ++ EA Sbjct: 433 EPMLIDGHELVITPSIGIAIAPEHANEVEGLLRCSDTAMYHAKASGKSTYLVYESSMEEA 492 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 RLT E+D+ A++N + ++ QPQV+ SGK+V AE LLR P+ P I Sbjct: 493 GLDRLTLENDLRKAMDNDELVLFYQPQVDTRSGKVVGAEALLRWMHPEQGLIPPFKFIPL 552 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRY 524 E GL+ +G WV+ E+C+ + + ++G+ LP ++VN+SALQ P+ + +L Sbjct: 553 AEEMGLIGEMGDWVIREACKQVQTFAKKGVSLPKVAVNVSALQFT-PSFTRRVKSILDEL 611 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + P TL LE+TE + D +A+V L L++ GV +++DDFG GY+ L ++ P+ Sbjct: 612 AVDPATLELELTEGVVMGDTNASVQALAELKDLGVSLSIDDFGTGYS---SLSYLSRFPL 668 Query: 585 DVLKIDKMFV---EGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 D LKID+ FV +S++ AII +AQSL L+++AEGVET+ Q +++ AG + Q Sbjct: 669 DELKIDRSFVIEANNSEQGASLVRAIIAMAQSLGLELVAEGVETDEQYEFMTTAGAHVIQ 728 Query: 642 GFLFARPLPIEIFE 655 G++F++P+P E E Sbjct: 729 GYMFSQPVPAEKLE 742 >UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V069_9PROT Length = 734 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 130/424 (30%), Positives = 226/424 (53%), Gaps = 19/424 (4%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN++LL + +++V+A K A++ I + + ++LL+ + ++ Sbjct: 307 LTGLPNRSLLRDRVQRVLAHSARHKNHGAILFIDLDNFKALNDTKGHNIGDLLLIEVAKR 366 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWH-----AITLGQQVLTIMSERLPIERIQLR 357 L+ + +A++ G +F V+ + E A +G+ VL ++ ++ + Sbjct: 367 LQDCVRNSDTVARMGGDEFVVVLEELNEDTQQAVAQAQDIGETVLASLNRPFNLQGFEHY 426 Query: 358 PHCSIGVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG+++F ++ + ++ A +A + A+ G+N ++FFDP + + R E D+ Sbjct: 427 SSASIGISLFRDNEIGMDDVFKHADTAMYQAKTSGRNTLRFFDPDMQASLEARAVLEIDL 486 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 +AL QF ++ Q Q+ + + + AE LLR P P I E GL++ +G Sbjct: 487 RHALSLQQFKLFFQIQMN-AANQPIGAEALLRWLHPKRGLVSPLDFISLAEDTGLILPIG 545 Query: 477 HWVLEESCRLLAAWQER--GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILE 534 WVLE +C + AW+ L L+VN+SA Q P+ V + L + P L LE Sbjct: 546 QWVLETACTQIKAWEANPLACELQLAVNVSARQFHQPDFVEQVRAALEKTGADPARLKLE 605 Query: 535 VTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV 594 +TES +++ + AV + L+ GVR ++DDFG GY+ L ++ LP+D LKID FV Sbjct: 606 LTESVVLNNINDAVIKMSDLKEVGVRFSMDDFGTGYS---SLSYLTQLPLDQLKIDLSFV 662 Query: 595 EGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 + P D+ ++ II + SL +++IAEGVETEAQRD+L + G QG+LF++P+ I Sbjct: 663 YNIGIKPTDAVIVQTIISMGNSLGMEVIAEGVETEAQRDFLERNGCHAYQGYLFSKPVSI 722 Query: 652 EIFE 655 FE Sbjct: 723 GEFE 726 >UniRef50_Q21IJ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21IJ5_SACD2 Length = 820 Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 137/458 (29%), Positives = 236/458 (51%), Gaps = 21/458 (4%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTT 270 DE+ LV S ++ + L+R + A ++DLPN++ L+E LE+ V + + Sbjct: 349 DEVVSLVVSSDITE--LKRTQAQMEHMAYHDALTDLPNRSYLVERLEEEVRKANHGQYYG 406 Query: 271 ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE 330 AL+ I + + L + +L + ++L +V ++ ++ G +F V+ + + Sbjct: 407 ALLFIDLDQFKYINDSLGHPAGDGVLKHVAQRLTAVTKENDLVVRLGGDEFVVVLTNLGD 466 Query: 331 PW-----HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAA 384 A +G+++ +SE +QL CS+G+ M+ D +L A +A Sbjct: 467 ELPTSILRAEDIGERLRRYISEPHFYNDLQLHVTCSVGIVMYPEEDAGVHELLRYADTAM 526 Query: 385 FTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAE 444 + + +G++ IQFF+ + A+ L E D+ ALE H+F+++ QP+V++T+ ++V AE Sbjct: 527 YQVKEQGRDAIQFFNKYMADKARNVLVMEGDLHKALEQHRFSLYYQPRVDVTTSQIVGAE 586 Query: 445 VLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM---LPLSV 501 LLR + PD P I +E GL+V VG WVLE+S R + WQE+GI + L V Sbjct: 587 ALLRWEHPDRGMISPAEFIPILETSGLIVEVGRWVLEDSIRQVKIWQEQGIWKDDMRLGV 646 Query: 502 NLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRV 561 N+S Q V D+ ++L I P + +E+TE I + VA + L G+ Sbjct: 647 NISPRQFRSSEFVNDVTKILQEVGINPSLIEMEITEGIVIHNLEETVATMSSLCELGINF 706 Query: 562 ALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQM 618 ALDDFG GY+ + ++K LP+ +LK+D+ FV + D + ++ I + L L + Sbjct: 707 ALDDFGTGYSS---ISYLKQLPVAILKVDQSFVRDITFDRNDRVLVETISAMGNMLGLDV 763 Query: 619 IAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 +AEGVET Q + + QG+L + P+ + F E Sbjct: 764 VAEGVETCDQLHLVREYNCKYYQGYLCSPPVNADAFAE 801 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 135/423 (31%), Positives = 224/423 (52%), Gaps = 19/423 (4%) Query: 250 LPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS 305 LPN+ +LM LE + +T AL+ + + + L Q +ILL + +L+S Sbjct: 351 LPNRRMLMGRLETAMHAALSTGHLGALLFVDLDDFKTLNDTLGHHQGDILLQQVANRLQS 410 Query: 306 VLSPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHC 360 + +A++ G +F V+ G+ + A + +V+ +++ + + Sbjct: 411 CVREADTVARLGGDEFVVMLEGLSKDVAEASTQAEAVAGKVMQALNQPYDLGTLTRSSTP 470 Query: 361 SIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 S+G+ +F + ++ RA A + A+ G+N + FDP+ A R E+ + A Sbjct: 471 SVGITVFGKQQESLDEPLKRADLAMYQAKAAGRNTSRLFDPKTQAAVTLRADLEAALRTA 530 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 LE QF ++LQPQ+ ++ AE L+R Q P +P I E CG++V +G+WV Sbjct: 531 LEEEQFVLYLQPQIS-EDVRVTGAEALIRWQHPTRGLVMPGEFIAVAEDCGMIVPIGNWV 589 Query: 480 LEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 L +C+ LA W Q + ++VN+SA Q + V +L+ L+R+ Q L +E+TE Sbjct: 590 LNTACKQLALWATQPAFAHMTIAVNVSAKQFHQHDFVEQVLDALSRHGAQASGLKIEITE 649 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 S I + + + L++ GV A+DDFG GY+ L ++K LP+DVLKID+ FV + Sbjct: 650 SMLIANVDDVIVRMEELQHHGVGFAMDDFGTGYSSL---TYLKRLPLDVLKIDQSFVRDV 706 Query: 598 ---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 D+++ I+ LA S+ L +IAEGVET Q +LA+ G QG+LF+RP+P+E F Sbjct: 707 LVDTNDAAIANMIVALANSMGLSVIAEGVETVEQMQYLARHGCHAYQGYLFSRPVPVERF 766 Query: 655 EES 657 E S Sbjct: 767 ETS 769 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 124/429 (28%), Positives = 229/429 (53%), Gaps = 16/429 (3%) Query: 237 EQNENAMRF-----PVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVL 287 ++ +N +R+ ++ LPN+ L + LEQ + + ++ AL I + + L Sbjct: 261 QEQKNILRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSEKDFALFFIDLDKFKHINDSL 320 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + + +L +++K + LA++SG +F VI + P A L +++L ++ + Sbjct: 321 GHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDLGHPEDASVLAEKILLVLQK 380 Query: 348 RLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 + I+ L SIG++++ D + E L A +A + A+ G+N +F+ P+ E A Sbjct: 381 PMYIDEYTLYISGSIGISLYPQDAMDTESLLKYADTAMYKAKENGRNTFEFYAPEMTEYA 440 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +R+ ++ + A+E + + QPQ++ + ++ E L+R Q P P+ I Sbjct: 441 LERIAMKTSLKEAIEKEELCVHYQPQIDARAECIIGVEALVRWQHPTRGLLHPEAFISLA 500 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+V + WV+ + + ++ W + G++ L++N+S QL N + ++ L + Sbjct: 501 EDTGLIVDIDKWVMRTAMKQVSTWHQEGLVSDVLALNISIKQLEGHNFMEEIAACLDDFD 560 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 +P L LE+ E + + + + L+ L G+ +++DDFG GY+ L L K LPI+ Sbjct: 561 FKPKWLELEIPEGQVMKNHTETIERLKELSVMGIGISIDDFGTGYSSLSLL---KRLPIN 617 Query: 586 VLKIDKMFVEGLPG--DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKIDK F+E +P D +++ AII LA SL L +IAEGVET+ Q+D+L + G QG+ Sbjct: 618 RLKIDKSFIEFIPNEEDVAIVKAIIALANSLKLDVIAEGVETDDQKDFLVENGCTKIQGY 677 Query: 644 LFARPLPIE 652 ++RP+ E Sbjct: 678 YYSRPIASE 686 >UniRef50_Q315P5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q315P5_DESDG Length = 595 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 139/417 (33%), Positives = 218/417 (52%), Gaps = 15/417 (3%) Query: 246 PVSDLPNKALLMEMLEQVV-----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV 300 P++ LPN++L +E L+ V AR ++++I + + VL + +L + Sbjct: 163 PLTGLPNRSLFLEKLDARVNGGRAARDGGASVVMIDVDRFKQINDVLGHEAGDGVLRVVA 222 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 ++L+ +L L ++ G +F ++ G + QQ+ + + + +L Sbjct: 223 DRLRGILGGNDALCRLGGDEFCLLLAGGGRAEEVLARVQQIQQRLMDSVDTGGRRLHLTV 282 Query: 361 SIGVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 S+GVA G E + A A+ G ++ F +E+A E ++ +A Sbjct: 283 SVGVATHRPGQNAPEDMMRNGGIALQHAKRAGGGGLEVFSDWMLESALNHARLEMELHHA 342 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 L+++ F + QP V++ SG+ V E L R P P I +E G ++ +G WV Sbjct: 343 LKDNAFHLEFQPLVDLHSGRPVRVEALARWDHPQRGAVSPADFIPVLEETGQILRLGSWV 402 Query: 480 LEESCRLLAAWQERGIML---PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 LE +C A WQ R L +SVNLSA QL P +V + +L+R ++P +L LEVT Sbjct: 403 LENACMAAARWQRRHPELRSVGVSVNLSARQLAQPALVDQVAAVLSRSGLEPASLKLEVT 462 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 E+ +D+P + +LR L++ GV +A+DDFG GY+ L LQ S PID LKIDK FV G Sbjct: 463 ETMLMDNPELSNLVLRRLKDLGVFLAIDDFGTGYSSLAYLQ---SFPIDTLKIDKSFVMG 519 Query: 597 L---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 + PG +++ A+ LA SL L ++AEGVE + QR L G AQGFLFARP+P Sbjct: 520 MTSDPGKFNIVKAVTALAHSLGLDVVAEGVEEQEQRIMLHAVGCEYAQGFLFARPVP 576 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 136/440 (30%), Positives = 227/440 (51%), Gaps = 14/440 (3%) Query: 222 RSYNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMII 275 +S L Q++ +R ++ NE A ++ LPN+ L + L Q + ++ AL+ I Sbjct: 308 QSEALAQEVREREQAQERLNELAYSDSLTHLPNRTLFQDRLHQAMEYAKRHERLIALLFI 367 Query: 276 TCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI 335 + + L A + LL + + VL LA++ G +F VI +Q P A+ Sbjct: 368 DLDDFKRVNDSLGHAAGDRLLQEIARRFGRVLRETDTLARLGGDEFTVILTDIQRPEDAV 427 Query: 336 TLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAE-QLYSRAISAAFTARHKGKNQ 394 T +++L + + + SIG+ ++ D TAE L A +A + A+ +GKN Sbjct: 428 TFVRKLLDTLRAPFMLGEQSITMSASIGITLYPSDDTAEADLLKDADTAMYQAKSRGKNT 487 Query: 395 IQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDG 454 F+ P+ ++ + RLT E D+ AL+ +QF + QP V + + E L+R Q P Sbjct: 488 FDFYAPELTQSVRARLTMEGDLRAALDTNQFLLHYQPIVSLNGAGVQGLEALVRWQHPVR 547 Query: 455 SWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNM 513 PD I E GL+ +G WV++ +C LA W RG+ L L++NLS +Q + Sbjct: 548 GLVPPDEFIPVAEDSGLIHEIGDWVIDAACAQLAQWDARGLSHLTLAINLSPVQFRRDGL 607 Query: 514 VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL 573 V+ + L ++ I L LE+TES ++ L+ L G+ + +DDFG GY+ L Sbjct: 608 VSRIARRLRQHSIASERLHLEITESLLMEQNRHVAETLQTLDAMGIGLCIDDFGTGYSAL 667 Query: 574 RQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRD 630 L+H PI LK+D+ FVE + +++ AI+++A +L L+++AEGVE ++Q + Sbjct: 668 NYLRH---FPIRQLKVDRSFVEDMLHAEDTRALVRAIVLMAHALRLEVVAEGVEEKSQLE 724 Query: 631 WLAKAGVGIAQGFLFARPLP 650 L + G QG+L +RPLP Sbjct: 725 LLREMGCDQVQGYLLSRPLP 744 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 148/489 (30%), Positives = 255/489 (52%), Gaps = 35/489 (7%) Query: 187 RNIARELNAIPAKELVGHQLALPR----LHQDDEIGMLVRSYNLNQQLLQRHYEEQNENA 242 R + E + I K+ G +L L R L E L+++Y + + R E Sbjct: 411 RGVLTEEHPISTKD--GLRLFLTRRATVLGDGGEPQYLIKTY---EDVTDRRQTESRMAH 465 Query: 243 MRF--PVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILL 296 M + ++DLPN+A ++ L Q++ T A++ + + L+D V A + LL Sbjct: 466 MAYHDGLTDLPNRAAFLQALSQMIEACADTGEEFAVLNVDLKGLKDVNDVFGHAIGDKLL 525 Query: 297 LTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQL 356 + + ++ +V + ++A++SG +F +I +G Q P L +Q+ ++ IE + Sbjct: 526 IEVARRVHTV-ARGGVVARLSGDEFGLIIDGKQ-PETGRALAEQLAAAIAVEFQIEGKSI 583 Query: 357 RPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 R + G+++F + L + A +A F A+ + + I F++P+ + + R + Sbjct: 584 RTALTTGISVFPHNGPDPASLLANAGAALFRAKARSRGSITFYEPEMDQQIRDRRVLHQE 643 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSA------EVLLRIQQPDGSWDLPDGLIDRIECC 469 + A++N + +++ QPQ +SG+ V E L R P + P I E Sbjct: 644 LSVAIKNGELSLYFQPQA--SSGRTVDCSEIIGFEALARWHHPVRGFVPPSDFIPLAEES 701 Query: 470 GLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPG 529 G++V +G W+L E+CR A+W + L ++VNLS Q +H ++VA + +L + PG Sbjct: 702 GMIVEMGEWILREACREAASWPK---PLQVAVNLSPAQFVHGDLVALVHSILLETGLSPG 758 Query: 530 TLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKI 589 L LE+TE I+D VA+LR L+ GVRV++DDFG GY+ L LQ + P D +KI Sbjct: 759 RLELEITEGVLIEDFDRGVALLRRLKALGVRVSMDDFGSGYSSLSYLQ---AFPFDKIKI 815 Query: 590 DKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFA 646 D+ FV L P +++I A+I L +N+ ++AEGVET Q +LA+ G QG+L Sbjct: 816 DRAFVMNLGRNPQSAAIIRAVIGLGHGMNMSIVAEGVETPEQLGFLAEQGCDSVQGYLLG 875 Query: 647 RPLPIEIFE 655 +PLPI+ ++ Sbjct: 876 KPLPIDKYD 884 >UniRef50_Q0AKC4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Hyphomonadaceae RepID=Q0AKC4_MARMM Length = 697 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 149/462 (32%), Positives = 238/462 (51%), Gaps = 29/462 (6%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ-----T 269 DE+ +L ++N L + + + A V++LPN+ + E+V ARK + Sbjct: 228 DELEVLANAFNRMFARLDGNLKRIHRLAYVDLVTELPNRERFRKETERV-ARKSLEDGGS 286 Query: 270 TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL-----------SPRMILAQISG 318 A++ + + + L + + LL + +L V P M+ A++ G Sbjct: 287 GAVLFLDLDRFKRVNDSLGIGEGDRLLEMVGRRLSEVTRGCDMASGNTEDPSMV-ARLGG 345 Query: 319 YDFAVIANGVQEPWHAITLGQQVLTIMSERLPIE--RIQLRPHCSIGVAMFYGD-LTAEQ 375 +F V+ +++ A + +++ + RLP E Q+ S+GVA+F D E Sbjct: 346 DEFTVLLPTIEDSADAARIANKLVDAI--RLPFEISGHQVFLGVSVGVAVFPQDGADPET 403 Query: 376 LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEM 435 L A A A+ G + QFF+P ++A +RL E+++ +A+ Q ++ QP+V M Sbjct: 404 LMRHADLAMAHAKRAGGSAAQFFEPTMNQSAFERLVLENELRDAVAQDQLVVFYQPKVLM 463 Query: 436 TSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI 495 T G AE L+R Q P P I+ E CGL+ +G WVL +CR AAW++RG+ Sbjct: 464 TDGACAGAEALVRWQHPTAGLLSPGAFIEAAEECGLIGEIGDWVLRAACREAAAWRDRGL 523 Query: 496 MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 +P++VN+SA+Q +LE L + P L LE+TES +++P + ++PLR Sbjct: 524 EIPVAVNVSAMQFERDGFSDSVLEALAAANLPPHLLELELTESIAMENPERVIEQVQPLR 583 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQ 612 + GV A+DDFG G++ L L M P DV KID+ FV + D ++ I+ +A+ Sbjct: 584 DRGVNFAIDDFGTGHSSLAYLTRM---PFDVFKIDQSFVRDMTTDHHARIVVETILAMAK 640 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 SL L+ +AEGVET Q L G +AQGFLFARP+P F Sbjct: 641 SLKLETVAEGVETPEQHQMLRAQGATLAQGFLFARPMPAGDF 682 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 135/419 (32%), Positives = 227/419 (54%), Gaps = 12/419 (2%) Query: 247 VSDLPNKALLMEMLE----QVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ + + +E V Q AL+++ + + L + + LL ++ Sbjct: 510 LTSLPNRIHMQDRVELAIHNAVRDNQRLALLLLDLDRFKTVNESLGHSAGDTLLQVAADR 569 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +KSV++P +LA+ G +F ++ + +P A ++V + + + + L SI Sbjct: 570 IKSVMAPGEMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANPIELHNHVLTITPSI 629 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++++ D E L A +A + A+ G+N +F+ A++ L ES + ALE Sbjct: 630 GISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAREILAIESQLRFALE 689 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +F + QPQVEM SG++V AE L+R P P I E G +V +G+WV+ Sbjct: 690 RDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIA 749 Query: 482 ESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+ R L W+ G+ L L++NLSALQ P++ + + L + L +EVTES Sbjct: 750 EATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTESII 809 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP-- 598 ++D A + + ++N G+R+++DDFG GY+ L L+ K+ D LKID+ FV +P Sbjct: 810 MEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKA---DKLKIDRSFVRDIPQD 866 Query: 599 -GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 DS++ AII +A++LN+Q++AEGVET Q +L + G QG+L A+PLP + F E Sbjct: 867 ADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAE 925 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 144/450 (32%), Positives = 227/450 (50%), Gaps = 23/450 (5%) Query: 212 HQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEM----LEQVVA 265 H+ E+G V +Y + + +RH + A ++DLPN+ L E L QV Sbjct: 500 HKRMELGGWVVTY---EDVTERHKAQARVAHMARHDSLTDLPNRTLFREKMGEGLNQVAI 556 Query: 266 RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIA 325 A++ + + L A + LL + +LK + +A++ G +FAV+ Sbjct: 557 AGGAMAVLCFDLDNFKTVNDRLGHAAGDRLLRWVAARLKENVGEHDTVARLGGDEFAVLQ 616 Query: 326 NGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF--YGDLTAEQLYSRAISA 383 G Q P A L ++++ I+ P+E + S+G+A+ +G L A++L A A Sbjct: 617 RGPQ-PQSAEKLARRLVEIIGHPPPLESQSIHVGVSVGIAIAPDHG-LDADELMKCADLA 674 Query: 384 AFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSA 443 + A+ +G+ Q F+P+ E A+ R E ++ ALE +F + QPQV + S +L Sbjct: 675 LYQAKARGRGAYQLFEPEMEEEARSRHALEHNLRGALEAREFHLVFQPQVRLESSELTGF 734 Query: 444 EVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNL 503 E LLR + P + P I E GL+V +G WVL +C A+W + + ++VNL Sbjct: 735 EALLRWKHPSRGFVSPAEFIPIAEENGLIVPIGEWVLRTACATAASWPD----VTVAVNL 790 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S +Q + A + L + P L LEVTE+ +DD A + IL LR GVRV+L Sbjct: 791 SPVQFRARGLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATIEILHQLRALGVRVSL 850 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFG+GY+ L +++ P D +KID+ FV L P +++ I L L ++ A Sbjct: 851 DDFGVGYS---SLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTA 907 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 EGVETE Q D++ + G QG+ F RP P Sbjct: 908 EGVETEEQLDFVRECGCTAVQGYYFGRPCP 937 >UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KBF3_PSEF5 Length = 641 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 136/417 (32%), Positives = 220/417 (52%), Gaps = 12/417 (2%) Query: 247 VSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LP+ LL + L Q +AR +Q A+M + + + L + LL + + Sbjct: 210 LTGLPSSTLLGDRLGQAMARARRYEQRLAVMFLGLDRFKRINHALGYPAGDELLKRIARR 269 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+ + L + +F V+ + Q P L Q++L +S+ I L+ S+ Sbjct: 270 LEQGMRESDSLFRYGSDEFVVVLHDQQHPAQIRALAQKLLATVSQFDDIAGHDLQVTASL 329 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++++ D A L +A A T++ + FF A+++ ES IL ALE Sbjct: 330 GISLYPEDGQDALALIKKAEMAMRTSKEQAPGSYCFFTDDMTHRAREQQYLESGILQALE 389 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +F + QP++ + SG +V AE L+R Q+P W P+ I E GL+ + WVL Sbjct: 390 RREFHLHYQPKIHLASGNVVGAEALIRWQRPQQGWISPELFIPVAEDSGLITRISQWVLG 449 Query: 482 ESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+ R AWQ G+ +PLS+NLSA P ++ + + L+ + P L LE+TE Sbjct: 450 EATRQCRAWQNAGLPPVPLSINLSAADFRQPQLLQQLRDALSDNALDPAWLELEITEGVL 509 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP-- 598 + + +A L ++ GVR+A+DDFG GY+ L +++ P+DVLKID+ F+ GL Sbjct: 510 LQNVEVTLATLLAIKALGVRLAVDDFGTGYSS---LSYLRKFPVDVLKIDQSFIHGLSHE 566 Query: 599 -GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 D+ +++AII L +SLNL++IAEGVET Q +L + G AQG+ F++ LP E F Sbjct: 567 HKDAVLVSAIINLGRSLNLKVIAEGVETHQQLTFLQQQGCEEAQGYYFSKALPAEDF 623 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 125/417 (29%), Positives = 223/417 (53%), Gaps = 13/417 (3%) Query: 247 VSDLPNKALLMEMLEQ----VVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ LL + L Q VV R ALM + + +D L ++LL + E+ Sbjct: 504 LTGLPNRRLLKDRLSQAVSSVVRRDAKLALMYLDLDHFKDVNDSLGHGAGDVLLQIVAER 563 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+ + LA++ G +F ++ NGV ++ +++ +S+ + I +LR S+ Sbjct: 564 LQGCVRADDTLARMGGDEFVLLLNGVNGADDVASIAGKIIHELSQPMRIGNDELRITPSL 623 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++M D A+ L A A + A+ +G+ +F+ + + +R+ E + +ALE Sbjct: 624 GISMCPQDGRDADDLLKYADVALYQAKQQGRATYRFYTQALHDQSVERVQLERLLRHALE 683 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++F ++ QPQV++ G+++ E L+R P P I E GL++ +G+WV++ Sbjct: 684 RNEFELYYQPQVDLCDGRIIGCEALIRWNHPGMGQVSPARFIPIAEQSGLIIDIGNWVMK 743 Query: 482 ESCRLLAAWQERGIMLPLSVNLSALQLMHPN-MVADMLELLTRYRIQPGTLILEVTESRR 540 ++C W ++G + +S N+SA Q M ++ + + L + P + +E+TES Sbjct: 744 QACHQAKRWHDQGWDIKVSFNVSARQFMRSGELMQSLRDALAESGVDPTRMEVELTESLL 803 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV---EGL 597 + DP IL +R G+++ALDDFG GY+ L +++ PI +LKID+ FV + Sbjct: 804 L-DPQGMGEILHEIRALGIQLALDDFGTGYS---SLSYLRRFPISILKIDRSFVSAADNN 859 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 D+ M+ II +A +L + +IAEG+ET AQRD L G + QG+ ++ P+P F Sbjct: 860 ADDAEMVKTIIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQGYHYSCPVPATEF 916 >UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMJ7_9PROT Length = 829 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 134/508 (26%), Positives = 256/508 (50%), Gaps = 16/508 (3%) Query: 158 TLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEI 217 +LV I + ++ + IN ++ PL+ I + I G+ + DE+ Sbjct: 319 SLVAILFFIIIVTFITSLVIINNMLSIPLKKILNGIEIISK----GNYENRIDITSKDEL 374 Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALM 273 G + +N + + + +E A P++ +PN+ + +E LE+ ++R + A+ Sbjct: 375 GAISSQFNNMADEIAKRETQLDELAHVDPLTKIPNRVMFIETLEKSISRAKRLNTKLAVF 434 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 + + ++ L + LL+ + + L V+ +++I G +F ++ ++ H Sbjct: 435 FLDLDDFKNVNDTLGHYVGDKLLIEIAKNLSIVMRESDTISRIGGDEFNILIEDLESLSH 494 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGK 392 + ++ + M+ L IE + SIG++++ D L A A + A+ G+ Sbjct: 495 IGEIAEKFIKQMTIPLYIENNAITISGSIGISIYPDDGEDTTTLLKNADLAMYKAKDNGR 554 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 NQ FF + + KR+ ++ A+ +F ++ QP+ + G + SAE L+R Sbjct: 555 NQYSFFSKELEVSLSKRINMLKELKEAVNRDEFRLYYQPKFSLIDGSIKSAEALIRWDSK 614 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHP 511 + + PD I E G +V +G WV++++C A+W E G+ + +SVN+S +Q Sbjct: 615 EFGFVSPDDFIPLSEDSGEIVKIGAWVIKQACEDFASWSELGLGITQVSVNVSNVQFTRD 674 Query: 512 NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYA 571 ++V + + + + I P ++ +E+TES +D A+ IL +R GV +A+DDFG GY+ Sbjct: 675 DIVKVLSDNIIKSGISPESIEVEITESYMQEDSERALQILHDVRKIGVDLAVDDFGTGYS 734 Query: 572 GLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQ 628 + ++K LPI+ LKID+ F+ +P D + I+ LA+++ L + AEG+ET Q Sbjct: 735 S---MSYLKRLPINRLKIDRSFIGDIPHDVDDVEITRIIVALAKTMGLAITAEGIETLEQ 791 Query: 629 RDWLAKAGVGIAQGFLFARPLPIEIFEE 656 +L + GV QG++ ++PLP E F E Sbjct: 792 MHFLQEMGVDEGQGYICSKPLPYEQFVE 819 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 147/430 (34%), Positives = 234/430 (54%), Gaps = 30/430 (6%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCE---TLRDTAGVLKEAQREILLLTL 299 ++ LPN+ LL++ L Q + T ALMI+ + TL DT G + LL+ + Sbjct: 588 LTGLPNRRLLLDRLNQARLSSERTREYGALMILDLDRFKTLNDTQG---HDVGDRLLIDV 644 Query: 300 VEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVLTIMSERLPIERI 354 +L + + + ++ G +F V+ G Q A + ++V +++ + Sbjct: 645 ARRLTASVRQNDTVCRLGGDEFVVVLEGFGSDEDQAVTQAEAIAEKVRAALNQPYSLSGN 704 Query: 355 QLRPH--CSIGVAMFYG-DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLT 411 R H S+G+ +F G D TA+ L +A A + A+ G+N ++FF+P A R+ Sbjct: 705 GSRFHSTTSVGLTLFCGHDATADMLLKQADVALYQAKDAGRNLVRFFNPAMQAAIDTRMA 764 Query: 412 EESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL-PDGLIDRIECCG 470 E+ + ALE +F ++ QPQV+ +++ AE LLR +P G+ + P I E G Sbjct: 765 MEAALRQALERDEFHVYYQPQVDQRE-RVIGAEALLR-WRPQGNEAISPLEFIPLAEETG 822 Query: 471 LMVTVGHWVLEESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQP 528 L++ +G WVL+ +C L AW+ R L ++VN+SA Q P+ VA + + L R + P Sbjct: 823 LILPIGKWVLDVACAQLKAWESDPRAAHLKIAVNVSARQFHEPDFVATVQDSLARSGVDP 882 Query: 529 GTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLK 588 L LE+TES ++ V+ + L GV LDDFG GY+ L ++K LP+D +K Sbjct: 883 TRLQLELTESVVLEKIETVVSRMEELNALGVSFCLDDFGTGYS---SLSYLKRLPLDQVK 939 Query: 589 IDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLF 645 ID+ FV + DS +++ AI+ +++SL L +IAEGVET AQRD+LA +G QGFLF Sbjct: 940 IDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIAEGVETHAQRDFLAGKCLGY-QGFLF 998 Query: 646 ARPLPIEIFE 655 P+PIE +E Sbjct: 999 CEPIPIEQWE 1008 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 126/418 (30%), Positives = 221/418 (52%), Gaps = 12/418 (2%) Query: 247 VSDLPNKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L + +E +AR + TAL+ + + + + LL+ + Sbjct: 595 LTSLPNRTLFYDRIESSLARAARNGKKTALLFVDIDRFKQVNDNHGHHTGDQLLVEAARR 654 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 + + + +A++ G +F VI + + + +++ + + ++ ++ SI Sbjct: 655 ISAHIRLGDTVARLGGDEFTVILSELDGLDPVQDIARRIQKSLRDPFRLDDKEIFSSASI 714 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+AM+ D AE L A A + + +G+N I FFD E A+ R E ++ A+ Sbjct: 715 GIAMYPDDGRNAESLLKHADVAMYHVKERGRNDILFFDKAINEQAEARAQLEDNLKTAIN 774 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 Q + QP+ ++ +++SAE L+R + P+ + P I E CGL+V +G WVL Sbjct: 775 TQQLFMVYQPRFNISGTEILSAEALIRWKHPEQGFISPGDFIPLAESCGLIVELGRWVLM 834 Query: 482 ESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 ++C+ W E G P+SVNLSA QL +++ D+ L + + P L LE+TE+ Sbjct: 835 QACQAAQEWNENTGQNTPVSVNLSARQLHDSSLLIDIENALNQTGLDPSLLELEITETMV 894 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 I D ++ L +R GVR+++DDFG GY+ L ++K LP+ +KIDK F++ +PG Sbjct: 895 IQDMETVISRLEAIRTIGVRLSVDDFGTGYSSLI---YLKRLPVSTVKIDKSFIDDVPGS 951 Query: 601 S---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 S +++ A+I ++ SL L ++AEGVETEAQ +L + QG+L A+P E + Sbjct: 952 SGSENLVKAVISMSHSLALNVVAEGVETEAQLSFLTENHCDEIQGYLLAKPDSAETLQ 1009 >UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E09_THICR Length = 665 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 129/438 (29%), Positives = 225/438 (51%), Gaps = 14/438 (3%) Query: 229 QLLQRHYEEQNE---NAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLR 281 Q R E+NE A +S L N+ L E + +++ T A++ + + + Sbjct: 221 QTFDRLDNEKNELYRQARTDNLSGLANRNHLNERINWLISEYSRTGQEFAVLFMDLDNFK 280 Query: 282 DTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQV 341 +L + LL + ++ VL I+A++ G +F ++ N Q + + ++ Sbjct: 281 TVNDMLGHEVGDNLLKNVSTIIQEVLRDYDIIARVGGDEFVIVLNYYQSNFELTHVINRI 340 Query: 342 LTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDP 400 L +SE ++ ++ SIG+ F D L A A + A++ GKN+ +FF Sbjct: 341 LDRISEVHMVDSHPVKVSASIGIVCFPKDGDNISTLMKNADIAMYEAKNSGKNRFKFFTE 400 Query: 401 QQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPD 460 + + E D+ AL+N++F ++ QP++ + G +V AE L+R P P+ Sbjct: 401 SLHKQVIGEIQLEQDMQRALKNNEFELYFQPKICVNDGSVVGAEALVRWNDPKKGLVPPN 460 Query: 461 GLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLE 519 I E GLMV +GHWVL+ + + W+E+G+ L +S+NLS +QL+ + Sbjct: 461 DFIPAAEKTGLMVPLGHWVLKTAIQQQVTWKEQGLADLQISINLSPVQLLDTLFDRKLQA 520 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 L+ + + P L +E+TES+ +++ + L +R G+ ++LDDFG GY+ L ++ Sbjct: 521 LINQSGVDPTKLDIEMTESQFMENTEQNLHSLSTMRKQGINISLDDFGTGYSS---LAYL 577 Query: 580 KSLPIDVLKIDKMFVEGLPGDSS--MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 K PID LKIDK F++ +S I I+ +A +LNL ++AEG+E EAQ ++L + G Sbjct: 578 KKFPIDTLKIDKTFIDDYATESGAIFIETIVKIAHTLNLNVVAEGIEQEAQLNYLVQTGC 637 Query: 638 GIAQGFLFARPLPIEIFE 655 QG+ + PLP+ FE Sbjct: 638 ETYQGYYCSAPLPVSEFE 655 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 134/427 (31%), Positives = 224/427 (52%), Gaps = 32/427 (7%) Query: 247 VSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L M+ L +A T L+ I + + + A + LL+ L Sbjct: 185 LTKLPNRVLFMDRLAMTLAEASRTNAQVGLLFIDLDKFKHFNDSMGHAFGDQLLIALAGI 244 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER------LPIERIQL 356 L +A++SG +F +I + + GQ+ L I+ R LP ++I Sbjct: 245 LARCSREMDTVARLSGDEFTIIVDSIS--------GQKDLDILCWRILDALKLP-QQIMG 295 Query: 357 RP---HCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTE 412 R SIG A++ D A L +A +A + A+ G+N + + + R++ Sbjct: 296 REIFISASIGTAIYPLDDEDANNLMIKADAAMYEAKRNGRNTYRHYAAGMQLYSLDRMSL 355 Query: 413 ESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLM 472 E+D+ A+E ++F ++ QPQ+ + SG++V E L+R P P I+ E GL+ Sbjct: 356 ETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWHHPQRGLLTPIHFIEIAEETGLI 415 Query: 473 VTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLE-LLTRYRIQPGT 530 V +G WV+ E+CR AW + G + +SVN+SA+Q + DM+E +L RI P Sbjct: 416 VAIGQWVISEACRQHQAWLQEGFQPMRISVNISAMQFYQSDF-CDMVEHILKETRINPAY 474 Query: 531 LILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKID 590 L E+TES + D A V L L G+++A+DDFG GY+ L +++ PID LK+D Sbjct: 475 LEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTGYS---NLSYLRKFPIDRLKVD 531 Query: 591 KMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFAR 647 + F++G+ P + ++ I+ LA+S++L+++AEGVET+ + W +G QG+ F++ Sbjct: 532 QSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVELHWAESSGCTFVQGYRFSQ 591 Query: 648 PLPIEIF 654 PLP E F Sbjct: 592 PLPAEKF 598 >UniRef50_Q48EW2 Diguanylate cyclase, putative n=10 Tax=Pseudomonas RepID=Q48EW2_PSE14 Length = 784 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 156/507 (30%), Positives = 270/507 (53%), Gaps = 35/507 (6%) Query: 162 IYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALP-RLHQDDEIGML 220 I LL SL+ T+A++ R + P++ +A I AK + P L + DE+GML Sbjct: 285 IALLASLLGTLALA----RSVSLPVQELA-----IAAKRIGDGDYKTPVTLVRSDELGML 335 Query: 221 VRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCE-- 278 + N QQ + + NA+ ++ LPN+AL+ME L ++A +T AL+ + E Sbjct: 336 ADAINTMQQGIAVREGQLAHNALHDNLTGLPNRALVMERLGSLIAANRTVALLYLGIENL 395 Query: 279 -TLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 T+ ++AG Q LL L ++L+ L +A++S +F ++ + A+ + Sbjct: 396 ATINESAGAEGVEQ---LLRQLGQRLQGNLRSGDTVARLSANEFLLLLDNTASDG-AVGM 451 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMF--YGDLTAEQLYSRAI----SAAFTARHKG 391 V ++SE I+ L C IG+ ++ +GD +A++L +RA AAF Sbjct: 452 ADAVQRLLSEPQRIDNHDLMLECCIGITVYPEHGD-SAQELVNRAAIARKDAAFI----- 505 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 ++Q + + A Q+++ D+ A +N + + QP++++ G + AE LLR Sbjct: 506 PGRLQIYQDGRDLAHQRQICLIRDLRKAPQNGELMLHYQPKLDIRQGYVRQAEALLRWTH 565 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHP 511 P P I E G + + +WV+EE+ R LA W++RG++L +SVN+SA L+ Sbjct: 566 PRFGNVSPAEFIVLAERTGSINLLTNWVIEEAMRQLAEWRQRGLVLQVSVNISADDLLGD 625 Query: 512 NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYA 571 ++ +++LL +Y + L+ E+TES + +P A+ +L LR+ G+ +++DDFG GY+ Sbjct: 626 DLAGYVMKLLKQYAVPAEQLVFEITESAVMSEPEKALVVLHRLRDCGISLSVDDFGTGYS 685 Query: 572 GLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQ 628 L H+K LP+ LKID+ FV L D+ ++ + I ++ +L L+++AEGVE + Sbjct: 686 ---SLAHLKRLPVQELKIDQSFVRNLDETSEDAVIVRSTIEMSHNLGLKVVAEGVEYQHS 742 Query: 629 RDWLAKAGVGIAQGFLFARPLPIEIFE 655 D L + AQG+L +RPL FE Sbjct: 743 LDLLRRWHCDTAQGYLISRPLTASAFE 769 >UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=Q1LBF7_RALME Length = 839 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 134/426 (31%), Positives = 223/426 (52%), Gaps = 12/426 (2%) Query: 236 EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQ 291 E N AM P++DLPN+ L E L+Q + R + ++ + + + + Sbjct: 400 ERLNHLAMHDPLTDLPNRTLFSERLKQAIIRARRASRRVGVLFLDLDRFKMINDTMGHGT 459 Query: 292 REILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPI 351 + L + +LK + +A++ G +F ++ +++ H + Q +L ++ + + Sbjct: 460 GDDALRVIAMRLKHAVRESDTVARLGGDEFTIVVEEIEDIRHVAHIAQVLLDVVGQPIDA 519 Query: 352 ERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRL 410 + SIG++++ D T +QL +A A + A+ +GKN +FF Q +A + + Sbjct: 520 AGRSVFVTPSIGISIYPDDGTDQQQLLMQADRAMYEAKQEGKNTFRFFATQMTSSAMESM 579 Query: 411 TEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCG 470 E ++ AL +F + QP ++ SG++VS E LLR Q P P ID E Sbjct: 580 ALECELRRALTRREFRLHYQPIYDLGSGRIVSVEALLRWQHPTRGLLSPGAFIDVAEESA 639 Query: 471 LMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPG 529 L+V +G WVL E+CR AAW G +SVNLSA Q+ H + + D+ ++L+ +QP Sbjct: 640 LVVPIGAWVLREACRQGAAWLRSGFEFGRMSVNLSARQIRHEHFLHDVSDVLSDAGMQPE 699 Query: 530 TLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKI 589 L LE+ ES + +L L GV +A+DDFG GY+ LQ +LP+D +K+ Sbjct: 700 HLQLELVESMAMTGNGVTELVLGELARRGVGLAIDDFGTGYSSFTYLQ---TLPVDTVKV 756 Query: 590 DKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFA 646 D+ F+ + D +++ AI+ +A++L L ++AEGVE AQ +L + G AQGFL A Sbjct: 757 DRSFLTAVIERERDGAILRAIVAMARALGLTVVAEGVENIAQLQFLREIGCDRAQGFLLA 816 Query: 647 RPLPIE 652 RP P E Sbjct: 817 RPGPAE 822 >UniRef50_Q1NS23 PAS:GGDEF:EAL:Response regulator receiver n=4 Tax=Deltaproteobacteria RepID=Q1NS23_9DELT Length = 989 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 144/436 (33%), Positives = 239/436 (54%), Gaps = 17/436 (3%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGV 286 L+R E A ++ LPN+ LL +LE + R Q A++++ C+ R Sbjct: 401 LRRSEERLQHLAHHDHLTGLPNRLLLEALLEHALERAQREQSRLAVLVLNCDRFRTINES 460 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 + A + LL+ +V++L+S+L LA+++G +FA++ G+ + + + Q L Sbjct: 461 VGYAAGDELLVAVVKRLQSILRAEDTLARLAGDEFALVLEGLGD-YREVEFTLQRLWQAL 519 Query: 347 ER---LPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQ 402 E+ LP + ++ S+G++ + D T L RA A A+ G N+ + Sbjct: 520 EQPFALP-DGYEVYIQASVGISFYPQDDDTVAGLLVRADGAVNQAKDGGGNRCYYATSTL 578 Query: 403 MEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGL 462 E +++ L E+ + AL+ +F ++ QP+V + G++ AE L+R Q+P P Sbjct: 579 NEESRRGLELEAALRRALQQREFLLYYQPKVALAGGRITGAEALIRWQRPGHGLVAPGEF 638 Query: 463 IDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELL 521 I E GL+V +G WV++E CR L W+E G+ L L+VN+SA Q P +V + + L Sbjct: 639 IPAAERSGLIVAMGAWVIDEGCRQLRRWREEGLGDLRLAVNVSASQFRAPGLVTALKQAL 698 Query: 522 TRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKS 581 +R+ G L LE+TES + +P AA+A + L+ GV +ALDDFG GY+ ++ Sbjct: 699 AEHRVAAGQLTLELTESMLMSEPEAAIARMEELKTLGVELALDDFGTGYS---SFANLSR 755 Query: 582 LPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVG 638 PID LKID+ FVEG+ P +++ A+II +A + L+++AEGVE + Q ++L + G Sbjct: 756 FPIDQLKIDRSFVEGIVSSPDAATIAASIIAMAHQMRLKVVAEGVENQPQANYLRRNGCD 815 Query: 639 IAQGFLFARPLPIEIF 654 QGFLF++PLP F Sbjct: 816 EIQGFLFSKPLPAADF 831 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 128/423 (30%), Positives = 226/423 (53%), Gaps = 12/423 (2%) Query: 247 VSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPNK L + LE+ + TAL+ I + + L + LL + ++ Sbjct: 365 LTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVAKR 424 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + + LA++ G +F +I ++E H T+ + + + I+ +L S+ Sbjct: 425 LSTSIRKTDTLARMGGDEFLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGHELFITPSM 484 Query: 363 GVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+++ D ++L + A A + A+ G N+ QF+ + A+ R+ ES + A+ Sbjct: 485 GISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRAKTRIELESYLRKAVN 544 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 QF ++ QPQ ++ SG+LV E LLR Q P P+ I E G+++ +G WVL+ Sbjct: 545 QDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWVLQ 604 Query: 482 ESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+C WQ+ G + ++VN+S Q P + + ++ I+P L LE+TES Sbjct: 605 EACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITESLL 664 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL--- 597 +DD +A+ IL+ L+ G+ +A+DDFG GY+ L ++K P+ LKID+ FV + Sbjct: 665 MDDIDSAINILKQLKAKGIHLAIDDFGTGYSS---LSYLKRFPLSRLKIDRSFVRDITTD 721 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 D+S+ A+I LA S+NL+++AEG+ET+ Q +L + G + QG+L++ P+ E F+ Sbjct: 722 DNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVAKEPFDHF 781 Query: 658 YLE 660 + + Sbjct: 782 FTD 784 >UniRef50_Q1GML0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GML0_SILST Length = 677 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 119/429 (27%), Positives = 226/429 (52%), Gaps = 12/429 (2%) Query: 240 ENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREIL 295 ++ +R ++ LP++ + +E + R + A+++I + RD + + + + Sbjct: 239 DSGLRDALTGLPSRRAMKTQVEFAIVRAKAATAELAIILIDLDRFRDINSIFGDDIGDRV 298 Query: 296 LLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQ 355 + L + ++SV+ P + + +I G +F ++ P + + + + + + ++ + Sbjct: 299 IERLADAVRSVMRPGITIGRIGGDEFILLIEQASSPEVVLQVAHDIGAALGDEVVVDGLT 358 Query: 356 LRPHCSIGVAMFYGDLTAEQLYSRAISAAFT-ARHKGKNQIQFFDPQQMEAAQKRLTEES 414 R S+G+A + D + ++ +A + A+ KG+ QI F+ + +++ L E Sbjct: 359 CRLSASMGIAQYPKDGSDQRNLMQAAGVSLCHAKAKGRGQICFYSENMEQRSEESLQMEH 418 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 D+ A+ + + ++ QPQ+++ +G+ + AE LLR Q P LP G + GL Sbjct: 419 DLKRAISDGELLMFYQPQIDLRTGQCIGAEALLRWQHPKKGLLLPGGFVPLALDTGLTTA 478 Query: 475 VGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 + +V +E CR + AW G +SVN+SA+ L+ P+ D+ +++ L + Sbjct: 479 IDQFVTDEVCRQIRAWNTEGYAPAKISVNMSAMTLLSPDFARDLRSTARHHQVDLTQLEI 538 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 EV E+ +++ + LR GV++A+DDFG GY+ L L K LPID +K+D+ F Sbjct: 539 EVLETTLFPRMRSSLNTVDDLRTMGVKLAIDDFGTGYSSLAML---KDLPIDRIKLDRRF 595 Query: 594 VEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 + LP D ++AA++ + +SL + +IAEGVET QRD L G AQG+LF+RP+P Sbjct: 596 ITSLPENVKDDRIVAAVVAMGRSLGVSVIAEGVETREQRDRLISLGCAEAQGYLFSRPVP 655 Query: 651 IEIFEESYL 659 F E++L Sbjct: 656 AAQFAETWL 664 >UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT05_CHRVO Length = 825 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 136/424 (32%), Positives = 225/424 (53%), Gaps = 12/424 (2%) Query: 242 AMRFPVSDLPNKALLMEMLE----QVVARKQTTALMIITCETLRDTAGVLKEAQREILLL 297 A P+++L N+ +L + +E Q + R++ A+++I + + L + LL Sbjct: 383 AKHDPLTNLCNRRMLQDRMEYELAQAMRRQKMMAVLLIDLDHFKTINDSLGHGHGDQLLA 442 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 T+ +L+ + +A++ G +F ++ ++ P +GQ++L ++E + +E++ Sbjct: 443 TIATRLQGSVRASDTVARLGGDEFCIVLGDIESPGDVDLMGQKLLQRLAEPVRLEQMVCY 502 Query: 358 PHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG++M D + ++L A A + A+H G+N+ FF P +AA+ RL S + Sbjct: 503 VTGSIGISMAPTDGMGVDELLRNADQAMYGAKHAGRNRYCFFAPAMQKAAEVRLQISSGL 562 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 ALE QF + QP V+++ G++ AE LLR P P I E CGL+ + Sbjct: 563 HLALEQGQFRLEFQPIVDLSCGRIRKAEALLRWHHPQHGVINPAVFIPIAEECGLIAKIC 622 Query: 477 HWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WV +++ + AW++ L +++N+SAL L+ LTR + L+LE+ Sbjct: 623 EWVYDQALDFIRAWRDMLRDDLRIAINVSALHFRDLRNPVRWLDKLTRAGVPGEALMLEI 682 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES +D H L R AG+++ALDDFG GY+ L ++K +D LKID+ FV Sbjct: 683 TESLLLDADHKVQEALDLYRAAGIQIALDDFGTGYSA---LSYLKRYRLDYLKIDQAFVG 739 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + P D ++ AI+++A L L +IAEGVET AQ L AQGFL++RPLP E Sbjct: 740 QIAEEPRDHALCEAIVVMAHKLGLNVIAEGVETPAQAAILQACRCEHAQGFLYSRPLPAE 799 Query: 653 IFEE 656 F E Sbjct: 800 RFVE 803 >UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BNY2_9PROT Length = 744 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 136/439 (30%), Positives = 238/439 (54%), Gaps = 17/439 (3%) Query: 235 YEEQN---ENAMRFPVSDLPNKALLMEMLEQVV--ARKQTT--ALMIITCETLRDTAGVL 287 YE++N A ++ LPN+ E LEQ + A++ T AL I + + L Sbjct: 308 YEQKNILHYQAHHDELTQLPNRTFFNERLEQAIEKAKRNKTLIALFYIDLDHFKQINDSL 367 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 +I+L E+LK+ + L+++ G +F +I + L Q+++ + + Sbjct: 368 GHEVGDIVLKITAERLKNKIRKEDTLSRLGGDEFTLIIEELNIAKDVSLLAQKIIEDLEK 427 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 + I+ L SIG++++ D T A+ L A SA + A+ +G+N QF+ + E A Sbjct: 428 PIYIDTHTLYISSSIGISIYPDDDTDAKNLLKYADSAMYKAKEEGRNNFQFYSSEMTELA 487 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 + + E+ + AL+N +F ++ QPQ++ + +LV E L+R P P I Sbjct: 488 FEHVAMEASLRQALQNEEFVVYYQPQMDGRTDRLVGMEALVRWNHPTLGLVQPYKFIPIA 547 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIMLP--LSVNLSALQLMHPNMVADMLELLTRY 524 E GL+V + WV++ + AW + G+ P L++NL+ QL + + M LL Sbjct: 548 EKNGLIVQIDQWVMKSAMTQFVAWYKDGLN-PGVLAMNLAVKQLQKKDFIDTMSNLLKST 606 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + +P + LEVTES+ + +P A+ IL+ + G+ +A+DDFG GY+ L ++K LPI Sbjct: 607 QCKPEWIELEVTESQIMTNPQEAIKILKQISEMGIELAVDDFGTGYSS---LSYLKRLPI 663 Query: 585 DVLKIDKMFVEGLPGDSSMIA---AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 D LKID+ F++ LP D + ++I L++SLNL++IAEGVET+ Q+++L + G Q Sbjct: 664 DKLKIDRTFIQDLPDDEEDVGITKSVIALSKSLNLKVIAEGVETDEQKNFLVENGCQNIQ 723 Query: 642 GFLFARPLPIEIFEESYLE 660 G+L+++P+ +E +L+ Sbjct: 724 GYLYSKPITANEMKERFLK 742 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 138/432 (31%), Positives = 226/432 (52%), Gaps = 21/432 (4%) Query: 233 RHYEEQNENAMRF-PVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVL 287 + YE + ++ + +++LPN+ L E L ++ R + AL+ I + + L Sbjct: 476 KQYEARLQHLAHYDALTELPNRLLFRERLADMLVRAERHGNMLALLFIDLDGFKPINDTL 535 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 A + LL + E+L + A++ G +FAV+ + ++ P A + + +L + E Sbjct: 536 GHAAGDELLRRVAERLGGCVRASDTTARLGGDEFAVLLDELRSPEEAGIIARNILDTL-E 594 Query: 348 RLPIERIQLRPHC-----SIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 R I + +P C SIG+ + D L AE L +A A + A+ +GKN+ +FF P+ Sbjct: 595 RPYI--LAGQPQCQYISASIGIGCYPSDSLDAETLLRQADMAMYRAKQEGKNRYRFFAPE 652 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 A +RL + + AL+ + + QP ++ + ++ E L+R + P LP Sbjct: 653 INAQASERLFMANSLRAALDRDELRLVFQPCMDFATLEVAGVEALVRWEHPQKGTILPSR 712 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLEL 520 I E GL+ +G WVL E+ R + W+ GI ++VNLS Q ++ + +L + Sbjct: 713 FISLAEESGLIEPIGEWVLREAARRVREWKNAGIFAGRVAVNLSPRQFRRSDLASRLLVV 772 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L + P L LEVTE ++ P AV +L L AGV +++DDFG GY+ L ++K Sbjct: 773 LDEAGLAPRDLELEVTEGMIMEHPERAVVVLTELVAAGVSISIDDFGTGYS---SLAYLK 829 Query: 581 SLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 P+ LKID+ FV GLPG D S+ A++ +A+SL L ++AEGVE Q D+L + G Sbjct: 830 RFPVHSLKIDRSFVSGLPGDRNDRSLTRAVVAVAKSLGLSVVAEGVEHAGQVDFLRRIGC 889 Query: 638 GIAQGFLFARPL 649 AQG F+RPL Sbjct: 890 DFAQGHYFSRPL 901 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 128/414 (30%), Positives = 225/414 (54%), Gaps = 13/414 (3%) Query: 246 PVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P+++LPNK LL + + +A K LM + + + L + + ++ L E Sbjct: 909 PLTNLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAE 968 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 + + + P + + G +F ++ + A + +++L I+++ ++ S Sbjct: 969 RFVAYMRPEDTVCRQGGDEFILLLPNT-DAEGAAHVAKKLLDIVAQPFNFHGQKIVLTAS 1027 Query: 362 IGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG++ + D + EQL A +A + A+++G+N QFF Q E A L ES++ +A+ Sbjct: 1028 IGISAYPQDGESFEQLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAI 1087 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E+ +F ++ QPQ + + K++ E L+R Q P+ P I E GL+ +G WVL Sbjct: 1088 EHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVL 1147 Query: 481 EESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 + + LA+WQE G+ +P++VNLS +Q + + ++L ++ P L LE+TE Sbjct: 1148 RTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGI 1207 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 ++D + +L L + GVR+++DDFG GY+ L ++K ID LKID+ FV G+ Sbjct: 1208 AMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSS---LSYLKKFKIDKLKIDQSFVRGIGS 1264 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 P D+++I AII +A+SL+ + IAEGVET Q ++L QG+ F++PLP Sbjct: 1265 HPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLP 1318 >UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V32_COLP3 Length = 682 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 138/436 (31%), Positives = 231/436 (52%), Gaps = 18/436 (4%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQ--VVARKQTTALMIITCETLR-----DTA 284 ++ EE + +A ++ LPN+ LL E L V+ ++Q T ++ C+ R D+ Sbjct: 231 KKSEEELHFHAYHDSLTSLPNRHLLFEKLNHLCVLHQEQPTYFAVLFCDLDRFKMINDSL 290 Query: 285 GVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTI 344 G + LL ++ + ++ L I+A+ G +F V+ G + + + Q+L++ Sbjct: 291 G---HDVGDELLKSVANRFEAKLRDNDIIARTGGDEFIVVIEGEKALKNLDKICLQILSL 347 Query: 345 MSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQM 403 + + + SIGV+ F D +L S A A + + G N FFD ++ Sbjct: 348 FEVPFQTKYGEFKTTISIGVSQFPSDSEDVRELISFADVAMYKIKKSGGNHYSFFDVKEK 407 Query: 404 EAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLI 463 Q+RL ES+I A+E QFA+W QPQV + ++ E L+R P+ PD I Sbjct: 408 ALIQQRLELESEITQAIEKDQFAVWYQPQVNTQTHEVYGVECLIRWNHPEQGLIPPDLFI 467 Query: 464 DRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLT 522 E G + +G++VL+ +C+ L W+ + I +++N+S Q +++A + + L Sbjct: 468 PIAEANGSIKELGYFVLKTACQQLRQWRIKNIFTGVMAINVSLRQFERNDLLAQVKKTLV 527 Query: 523 RYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSL 582 + ++ LEVTES +D + IL LR GV+VA+DDFG GY+ LQ +KSL Sbjct: 528 DEMLPAESIELEVTESLFSEDNNYHTPILCALRELGVKVAIDDFGTGYSS---LQRLKSL 584 Query: 583 PIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGI 639 PID +KIDK FV+ + P D +++ A I+L+++ + +IAEG+ET+ Q D L+ G Sbjct: 585 PIDNVKIDKCFVDNIEHCPEDVAIVMATILLSKTFKVDVIAEGIETQEQADKLSDLGCFN 644 Query: 640 AQGFLFARPLPIEIFE 655 QG+L++RPL FE Sbjct: 645 QQGYLYSRPLKAHDFE 660 >UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKZ2_PSEU5 Length = 886 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 150/437 (34%), Positives = 234/437 (53%), Gaps = 20/437 (4%) Query: 236 EEQNEN-AMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEA 290 EE+ N A P++ LPN+ LL++ L Q +A Q ALM I + ++ + Sbjct: 440 EERIHNLAFYDPLTGLPNRRLLLDRLHQAMAVSRRSNQLGALMFIDLDNFKNINDLHGHQ 499 Query: 291 QREILLLTLVEKLKSVLSPRMILAQISGYDFAV-IANGVQEPWHAIT----LGQQVLTIM 345 + +L E+L + + ++A++ G +F V + N +P A +G ++L + Sbjct: 500 TGDQVLRVAAERLHAEVRASDMVARLGGDEFVVMLENLGDDPLRAAAQAEHIGMKLLNSL 559 Query: 346 SERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + + L SIGV +F G+ ++++L RA + + A+ GKN ++FFDP+ Sbjct: 560 DRSYRLNELGLYSSASIGVVLFGGEACSSDELMKRADMSMYEAKISGKNALRFFDPRMQL 619 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 A Q+RL E+ I L+N +F + QPQ+E +G ++ AE L+R Q P P I Sbjct: 620 AVQERLRLEAGIRQGLKNGEFVLSFQPQLEQNAG-VIGAEALVRWQHPQRGLLSPAAFIA 678 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLT 522 + E GL+ + VL+++C LA W L LSVNLSA L + V +L+LL Sbjct: 679 QAEHAGLIHALDLQVLQQACGQLARWAATPAFADLTLSVNLSAHLLYQDHFVEKLLDLLE 738 Query: 523 RYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSL 582 R P L LE+TE+ +D+ A+A + L+ G+R ++DDFG GY+ + LQ L Sbjct: 739 RSGANPARLKLELTETLLLDNMPEAIARMTRLKQHGIRFSIDDFGTGYSSMSYLQQ---L 795 Query: 583 PIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGI 639 P+D LKID+ F+ LP D+S ++ AI LA L L++IAEGVE+ AQR L G Sbjct: 796 PLDELKIDQTFIRRLPDDASSLTIVRAICALASGLGLEVIAEGVESGAQRSVLLGNGCHR 855 Query: 640 AQGFLFARPLPIEIFEE 656 QG+LF +P+P EE Sbjct: 856 FQGYLFGKPMPAMELEE 872 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37649 Protein yhjK n=86 Tax=Enterobacteriaceae RepID=Y... 806 0.0 UniRef50_B4SWG2 Protein YhjK n=42 Tax=Enterobacteriaceae RepID=B... 786 0.0 UniRef50_Q1C186 Diguanylate cyclase/phosphodiesterase n=45 Tax=E... 746 0.0 UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 739 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 733 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 723 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 707 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 706 0.0 UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=c... 702 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 697 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 696 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 695 0.0 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 693 0.0 UniRef50_Q2SDG6 Predicted signal transduction protein containing... 693 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 692 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 691 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 691 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 688 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 684 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 681 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 680 0.0 UniRef50_C6XC99 Diguanylate cyclase/phosphodiesterase with extra... 679 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 679 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 679 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 678 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 676 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 676 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 675 0.0 UniRef50_D0ZGP0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ed... 675 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 675 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 675 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 673 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 673 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 672 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 672 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 670 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 669 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 669 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 669 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 668 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 668 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 668 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 667 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 667 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 667 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 666 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 666 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 666 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 666 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 666 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 664 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 664 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 662 0.0 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 662 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 661 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 661 0.0 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 660 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 659 0.0 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 659 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 659 0.0 UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 659 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 659 0.0 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 658 0.0 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 657 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 656 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 656 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 655 0.0 UniRef50_C5T6Q1 Diguanylate cyclase/phosphodiesterase with extra... 655 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 654 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 654 0.0 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 654 0.0 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 654 0.0 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 654 0.0 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 653 0.0 UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 653 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 652 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 652 0.0 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 652 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 652 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 651 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 651 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 650 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 650 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 650 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 649 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 649 0.0 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 649 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 648 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 647 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 645 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 645 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 644 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 642 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 642 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 642 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 642 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 641 0.0 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 641 0.0 UniRef50_C6WW34 Response regulator receiver modulated diguanylat... 640 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococc... 640 0.0 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 640 0.0 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 638 0.0 UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya... 638 0.0 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 638 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_C6P3U3 Response regulator receiver modulated diguanylat... 637 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 637 0.0 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 636 0.0 UniRef50_Q2S7Q5 Predicted signal transduction protein containing... 636 0.0 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 636 0.0 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 636 0.0 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 635 e-180 Sequences not found previously or not previously below threshold: UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 678 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 676 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 665 0.0 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 665 0.0 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 662 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 661 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 659 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 659 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 659 0.0 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 658 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 657 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 654 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 651 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 650 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 650 0.0 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 650 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 649 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 648 0.0 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 648 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 647 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 645 0.0 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 645 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 643 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 642 0.0 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 641 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 641 0.0 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 641 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 640 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 638 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 637 0.0 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 637 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 636 0.0 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 636 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 635 e-180 >UniRef50_P37649 Protein yhjK n=86 Tax=Enterobacteriaceae RepID=YHJK_ECOLI Length = 649 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 649/649 (100%), Positives = 649/649 (100%) Query: 14 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL 73 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL Sbjct: 1 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL 60 Query: 74 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP 133 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP Sbjct: 61 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP 120 Query: 134 QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL 193 QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL Sbjct: 121 QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL 180 Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK 253 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK Sbjct: 181 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK 240 Query: 254 ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL 313 ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL Sbjct: 241 ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL 300 Query: 314 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA 373 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA Sbjct: 301 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA 360 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV Sbjct: 361 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 420 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 493 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER Sbjct: 421 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 480 Query: 494 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP 553 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP Sbjct: 481 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP 540 Query: 554 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQS 613 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQS Sbjct: 541 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQS 600 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK Sbjct: 601 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 649 >UniRef50_B4SWG2 Protein YhjK n=42 Tax=Enterobacteriaceae RepID=B4SWG2_SALNS Length = 668 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 559/662 (84%), Positives = 619/662 (93%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 MRVSRSLTIKQMAMVAAVV++FVF+FCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA Sbjct: 1 MRVSRSLTIKQMAMVAAVVMMFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 ILK D+P AE IL SIKPAGVVSRADVVLPNQFQALRK FIPERPVPVMVTRLFELPVQI Sbjct: 61 ILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQI 120 Query: 121 SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR 180 SL VYSLERPANPQP+AYLVLQADS+RMYKFVMS LSTLVTIYLLLSLILTVAI+WC+NR Sbjct: 121 SLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNR 180 Query: 181 LILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE 240 LI+HPLR IARELN IP +EL+GHQLALPRLHQDDEIGMLVRSYNLNQQL+QR EEQ + Sbjct: 181 LIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD 240 Query: 241 NAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV 300 NAMRFPVS+LPNKA LM +LEQV+ R+QTTAL+I+TCETLRDTAGVL+E QREILLLTLV Sbjct: 241 NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLV 300 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 EKLKSVL+PRM+L Q+SGYDFA+IA+GV+EPWHAITLGQQ+LTI++ERLPI+ IQLRP C Sbjct: 301 EKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSC 360 Query: 361 SIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 SIG+AM+YGDLTAE+LY RA+SAAFTAR KGKNQIQFFDP QMEAAQ+RLTEESDIL AL Sbjct: 361 SIGIAMYYGDLTAEELYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTAL 420 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 +NHQFAIWLQPQVEM SG ++SAE LLR+QQPDGSW+LPDGLI+RIE CGLMVTVG+WVL Sbjct: 421 DNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPDGLIERIESCGLMVTVGYWVL 480 Query: 481 EESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 EESCR LAAWQERG+ LPLSVNLSALQLMHP MV+++LELL RYRIQPGTLILEVTESRR Sbjct: 481 EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRR 540 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 IDDPHAAVAILRPLRNAGVR+ALDDFGMGYAGLRQLQHMKSLP+D+LKIDKMFV+GLP D Sbjct: 541 IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDD 600 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 SM+ AII++A+SLNLQ+IAEGVE EAQR WL +AGV +AQGFLFARP+P +IFEE YL Sbjct: 601 HSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLS 660 Query: 661 EK 662 + Sbjct: 661 HE 662 >UniRef50_Q1C186 Diguanylate cyclase/phosphodiesterase n=45 Tax=Enterobacteriaceae RepID=Q1C186_YERPA Length = 728 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 321/666 (48%), Positives = 463/666 (69%), Gaps = 5/666 (0%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 +RV RSLTIKQMA VA V LV + IF + LFH VQQ + + A QLESIA SVR+PLS A Sbjct: 58 LRVRRSLTIKQMAAVAVVALVTICIFIILQLFHFVQQRKDDYANQLESIAYSVRQPLSEA 117 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 IL DIP+A+ IL S+ P G++SRA+V+LPNQ Q L +F ERP+P R+F LPVQI Sbjct: 118 ILSVDIPQAKKILNSLLPIGILSRAEVILPNQIQVLHANFPTERPIPHWAKRVFSLPVQI 177 Query: 121 SLGVYSLER-PANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCIN 179 ++ +Y+LER PANPQP+A+LVL+ADSFRMY+F++S LS +++ YLLL+L+L+V+I+WCIN Sbjct: 178 TVPLYALERVPANPQPLAHLVLRADSFRMYQFILSALSAMLSTYLLLALVLSVSIAWCIN 237 Query: 180 RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN 239 RLI+HPLR +A+EL I ++ HQL LP HQDDE+G+LVR+YN NQQLL Y + Sbjct: 238 RLIIHPLRAMAKELEDIGDHGVLHHQLTLPAHHQDDELGVLVRNYNRNQQLLADAYADMG 297 Query: 240 ENAMRFPVSDLPNKALLMEMLEQVVARKQTT---ALMIITCETLRDTAGVLKEAQREILL 296 + RFPV++LPN++L + +LE+ +A T L++I ETL++ +G + EAQ + LL Sbjct: 298 RISHRFPVTELPNRSLFISLLEKEIASSTRTDHFHLLVIGIETLQEVSGAMSEAQHQQLL 357 Query: 297 LTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQL 356 LT+V++++ + +LAQ+S +FAV+A G + + A+ L +++++ +++ L + I L Sbjct: 358 LTIVQRIEQCIDDSDLLAQLSKTEFAVLARGTRRSFPAMQLARRIMSQVTQPLFFDEITL 417 Query: 357 RPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 RP SIG+ + AE + A +A A H+G+NQI F+P +E KRLT+E+D Sbjct: 418 RPSASIGITRYQAQQDTAESMMRNASTAMMAAHHEGRNQIMVFEPHLIEKTHKRLTQEND 477 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 +L A+ENH F ++LQPQ +M +++ AE LLR QPDGS+ LP G + E G+MV + Sbjct: 478 LLQAIENHDFTLFLQPQWDMKRQQVIGAEALLRWCQPDGSYVLPSGFVHFAEEEGMMVPL 537 Query: 476 GHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 G+WVLEE+CR+LA W+ RG+ LPLSVN+S LQ+ + + + L++ Y I P L+LE+ Sbjct: 538 GNWVLEEACRILADWKARGVSLPLSVNISGLQVQNKQFLPHLKTLISHYHIDPQQLLLEI 597 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TE+ +I D A+ +LR L+ G+ +ALDDFG+GY+ LR L H+KSLPI ++K+DK FV+ Sbjct: 598 TETAQIQDLDEALRLLRELQGLGLLIALDDFGIGYSSLRYLNHLKSLPIHMIKLDKSFVK 657 Query: 596 GLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 LP D ++ I ++ L ++++AEGVETE QR WL + G+ QGFLF+ PLP FE Sbjct: 658 NLPEDDAIARIISCVSDVLKVRVMAEGVETEEQRQWLLEHGIQCGQGFLFSPPLPRAEFE 717 Query: 656 ESYLEE 661 Y Sbjct: 718 AQYFSS 723 >UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q0HLF7_SHESM Length = 684 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 192/676 (28%), Positives = 344/676 (50%), Gaps = 28/676 (4%) Query: 5 RSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKG 64 +SLT KQ +V L F V + +V + T + + SV +P ++A+ Sbjct: 6 KSLTWKQTNLVVFTALFFAIAIFVVEIALVVIATKQQLTTTQQELLDSVEQPAANAVWAL 65 Query: 65 DIPEAEAILASIK-----PAGVVSRAD----VVLPNQFQALRKSFIPERPVPVMVTRLFE 115 D A L + V+ D V + N + ++FI + +LF+ Sbjct: 66 DDNLARQTLEGAIKVEHVGSAVIELDDGSMFVSVSNNKKNDSQTFIS------LSNKLFD 119 Query: 116 LPVQISLGVYS---LERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTV 172 +IS +Y E Q I L + D+ + + S L L +L+LT+ Sbjct: 120 DLKEISRPLYRPFYFEGTQKQQLIGTLTIFYDTQELTNTLFSQLRFSFFATLARALLLTL 179 Query: 173 AISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ 232 +S +R + P+ I+ ++ I + L + H+DDE+G++ +N Sbjct: 180 VLSVVFHRFLTQPIARISEAIDKISPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFS 239 Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLK 288 + + + A R P++ LPN+ LL+E + + R + + ALM I + ++ L Sbjct: 240 QTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFALMFIDLDRFKNINDSLG 299 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 A + L + L+ V+ + ++++ G +F ++A+ V P A ++L ++ Sbjct: 300 HALGDQFLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPDQAADFVDKLLVQLNVP 359 Query: 349 LPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + + + P SIG++++ D AE L A A ++A+ G NQ FF Q E A Sbjct: 360 IQLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTERAA 419 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 RL E+ + +AL+N++F ++ QP++++ +GK+ E L+R Q+ P I E Sbjct: 420 VRLRTEASLHDALKNNEFLLYFQPKLDLQTGKITGCEALIRWQKDGR-LISPISFIPVAE 478 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 G+++ +G WV+E+SCR+L WQ++ +P+++N+++ Q ++V+D+ ++ RY+I Sbjct: 479 ETGIIIPIGRWVIEQSCRVLREWQKKYNFAIPIAINVASQQFADASLVSDIKQMALRYQI 538 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 QP L +E+TE+ ++D A+ L L++AG +A+DDFG GY+ L +++ LPI Sbjct: 539 QPELLEIEITETSLMNDIELAINKLEQLKSAGFGIAVDDFGTGYSS---LSYLRHLPITT 595 Query: 587 LKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFA 646 +KID+ FV LP DS++ + I+ML + LNL ++AEG+E E Q DWL + I QGF F+ Sbjct: 596 MKIDRCFVSDLPEDSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKRNQCQIGQGFYFS 655 Query: 647 RPLPIEIFEESYLEEK 662 +PLP FE Y+ + Sbjct: 656 QPLPQAEFEALYIANQ 671 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 134/452 (29%), Positives = 229/452 (50%), Gaps = 12/452 (2%) Query: 220 LVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMII 275 L ++ +R E A +++LPN+ L + L + + A+M + Sbjct: 494 LYQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFL 553 Query: 276 TCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI 335 + + L + LL + ++ +L +A+I G +F ++ + + +A Sbjct: 554 DLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENAS 613 Query: 336 TLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQ 394 + +++ ++ I + SIG+A++ D AE L A +A + A+ G+N Sbjct: 614 IVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNN 673 Query: 395 IQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDG 454 QF+ P +R E+++ AL+ +F I+ QPQVE+ +GK+V E L+R Q P Sbjct: 674 YQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQR 733 Query: 455 SWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNM 513 P I E GL++ +G W+L +C AWQ+RG + ++VNLSA Q + P++ Sbjct: 734 GMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHL 793 Query: 514 VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL 573 + +L + P L LE+TES + D L LR G+ +A+DDFG GY+ Sbjct: 794 PQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSS- 852 Query: 574 RQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRD 630 L ++K LPID+LKID+ F+ L D ++I+AII L +L ++++AEGVET+ Q Sbjct: 853 --LNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLM 910 Query: 631 WLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +L + + QG+LF +PLP+ E+ YL Sbjct: 911 FLRQQQCDLMQGYLFTKPLPVRELEQKYLSNN 942 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 138/476 (28%), Positives = 245/476 (51%), Gaps = 17/476 (3%) Query: 199 KELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLPNKALL 256 ++L + + D G++ + + + R+ E+ A P++ LPN+ LL Sbjct: 417 GSPFWNELFIAPVRDRD--GVVTNYIGVMNDITEHRRYEEQLVYQATHDPLTGLPNRNLL 474 Query: 257 MEMLEQVVA-----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM 311 + L Q +A R+ +M + + + L ++LL + +LK+ L Sbjct: 475 QDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGD 534 Query: 312 ILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL 371 +A++ G ++ ++ V+E IT+ ++++ + + L + ++ SIG+A+F D Sbjct: 535 TVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDG 594 Query: 372 -TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQ 430 T + L A +A + A+ +GKN QF+ + +RL+ E+ + A++N +F + Q Sbjct: 595 ETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQ 654 Query: 431 PQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW 490 P+V++ +G++ E L+R P+ P I E GL+V +G WVL +C AW Sbjct: 655 PRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAW 714 Query: 491 QERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVA 549 Q+ G+ L ++VNLSA Q N++A + E+L + P L LE+TES + + + A Sbjct: 715 QDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAA 774 Query: 550 ILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAA 606 ILR L + G+ VA+DDFG GY+ L ++K PI LKID+ F+ + P D++++ Sbjct: 775 ILRELTDRGIEVAIDDFGTGYSS---LSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKT 831 Query: 607 IIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 II +A L ++ IAEGVE Q D+L + QG+ F+RP+ E + K Sbjct: 832 IITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLLADGK 887 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 707 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 245/506 (48%), Gaps = 35/506 (6%) Query: 178 INRLILHPLRNIARELNAIP------AKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL 231 +N +L P+ + R I + V QL H ++R++ L + L Sbjct: 116 MNTALLVPIFDEGRVAACIAAFRMDKPFDQVDEQLLQQYAHS---ASAVLRNFRLMEDLR 172 Query: 232 Q-------------RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMI 274 + R E + A ++ LPN+ L + L Q +A Q A+M Sbjct: 173 RHAAMLEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMF 232 Query: 275 ITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS-PRMILAQISGYDFAVIANGVQEPWH 333 + + + L A + LL+ + ++L++ +A+ G +F + + + + Sbjct: 233 LDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKD 292 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGK 392 A T+ Q+++ + I+ +L SIG++++ D + + L A A + A+ +G+ Sbjct: 293 AFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGR 352 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 N Q F P+ A +RL+ E+D+ ALE +F + QP+V + G++ E L+R Q P Sbjct: 353 NNCQLFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHP 412 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHP 511 P I E GL+V +G WVL +C+ AWQ+ G + ++VNLS QL Sbjct: 413 SMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQG 472 Query: 512 NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYA 571 ++ + +L + PG L++EVTES +DD + R L GVR+++DDFG GY+ Sbjct: 473 DLSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYS 532 Query: 572 GLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQ 628 L ++K P+ LKID+ FV + P D ++ A+I +A+ LNL ++AEGVET Q Sbjct: 533 S---LHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQ 589 Query: 629 RDWLAKAGVGIAQGFLFARPLPIEIF 654 + L QGFLF+ P P E F Sbjct: 590 MEVLRALNCRYMQGFLFSEPAPAEQF 615 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 144/460 (31%), Positives = 241/460 (52%), Gaps = 14/460 (3%) Query: 214 DDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTA 271 D+ G + + +R+ E R ++ L N++LL + L Q ++ Sbjct: 489 KDDTGEVSHFVVALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYN 548 Query: 272 ----LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 + + + + L ++LL + E+L+ + ++++ G +F +I Sbjct: 549 HPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPE 608 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + + + Q+++ +++ L IE + SIGVA++ D T E+L A A + Sbjct: 609 RVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYR 668 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N QF+ E A +RL E D+ NA+E +F + QPQ+++ +GK+V E L Sbjct: 669 AKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEAL 728 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 +R Q P+ P I E GL+V +G WV+ E+CR WQE G+ L +SVNLSA Sbjct: 729 IRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSA 788 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q +++ + L ++ P L +E+TES + D A+ ILR L+ GV++++DD Sbjct: 789 RQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDD 848 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K PIDVLKID+ FV + P D++++A+II LA SL L +IAEG Sbjct: 849 FGTGYSS---LSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEG 905 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VETE Q +L + QG+ F+RP+ + E ++K Sbjct: 906 VETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLKDDK 945 >UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=cellular organisms RepID=A4XXL0_PSEMY Length = 711 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 173/667 (25%), Positives = 321/667 (48%), Gaps = 28/667 (4%) Query: 14 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL 73 ++ + ++V V + C ++F + R A + I R+P + A+ D ++ Sbjct: 41 VLLSALVVGVVLSCAQIVFD-AYKTRQAVANDAQRILGMFRDPSTQAVYSLDREMGMQVI 99 Query: 74 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLE---RP 130 + V A + PN+ KS R + + TR P+ +S + R Sbjct: 100 EGLFQHESVRYAAIGHPNEPMLAEKS----RELVQIATRWLTDPILGQEQQFSTKLVGRG 155 Query: 131 ANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIA 190 + L + D+ + ++ + +L ++ + + + + L+ PL I Sbjct: 156 PYSEYYGDLNITLDTAPYGESFVTNSVIIFVSGVLRAMAMALVLYLVYHWLLTKPLSKII 215 Query: 191 RELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE-------NAM 243 L +I H+L + + ++ +E+G+ + + N ++R+ + E A Sbjct: 216 EHLTSINPDRPSEHKLPMLKGNEKNELGLWINTANQLLASIERNTHLRREAENSLLRMAQ 275 Query: 244 RFPVSDLPNKALLMEML----EQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTL 299 ++ LPN+ L + L E ++ A++ + + + + LLL L Sbjct: 276 YDFLTGLPNRQQLQQQLDQILEDAGRLQRRVAVLCVGLDDFKGINEQFSYQSGDQLLLAL 335 Query: 300 VEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPH 359 ++L+S LA++ G FA++ +++P+ A L Q VL + ++ ++R Sbjct: 336 SDRLRSHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSVLDDLELPFLLDHQEVRLR 395 Query: 360 CSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILN 418 +IG+ +F D + E+L +A A+ + +N+ QF+ ++R E D+ + Sbjct: 396 ATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFYIASVDSEMRRRRELEKDLRD 455 Query: 419 ALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHW 478 AL +Q + QPQV+ ++V E LLR Q P + PD I E G ++ +G W Sbjct: 456 ALALNQLHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVAPDLFIPLAEQNGTIIPIGEW 515 Query: 479 VLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 +L+++CR L W ++G L +++NLS +QL H + + L+ YR+ P +L LEVTE Sbjct: 516 ILDQTCRQLREWHDQGFTDLRMAINLSTVQLHHAELPRVVNNLMQVYRLPPRSLELEVTE 575 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 + ++D A L LR +G +A+DDFG GY+ L ++KSLP+D +KIDK FV+ L Sbjct: 576 TGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSS---LSYLKSLPLDKIKIDKSFVQDL 632 Query: 598 ---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 D++++ AII L +SL +Q+IAEGVET Q ++ G QG+L+++PLP Sbjct: 633 LEDEDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAQGCHEGQGYLYSKPLPAREL 692 Query: 655 EESYLEE 661 +L++ Sbjct: 693 -TLFLKQ 698 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 136/451 (30%), Positives = 230/451 (50%), Gaps = 14/451 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 ++ G + + + R + A PV+ LPN+ LL + L+ + R + Sbjct: 498 NQSGQAEAIIGMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQ 557 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++ + + + L A + LL + +L + +A++ G +F V+ + + Sbjct: 558 GVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISAL 617 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTA 387 ++ ++L + E I+ ++ SIG+++F D AE+L A A + A Sbjct: 618 DNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQA 677 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G+N FF P+ A +RL ES + ALE +F + QPQ+E+ SG + E LL Sbjct: 678 KEAGRNTCHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALL 737 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSAL 506 R + PD P+ I E GL+V +G WVL E+CR WQ+ G L ++VN+SA Sbjct: 738 RWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSAR 797 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q N+ + ++L + P L LE+TES +++P A+ LR L+ G+ +++DDF Sbjct: 798 QFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDF 857 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L H+K PID LKID+ FV+ + D+++ AII LA S+ L ++AEG+ Sbjct: 858 GTGYSS---LSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGI 914 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 E Q +++ + QG+ +RP+ E F Sbjct: 915 EHSEQMEFMHQRHCDTMQGYYLSRPVTAEEF 945 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 151/465 (32%), Positives = 237/465 (50%), Gaps = 21/465 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D GM+ + L QR E+ A P++ LPN+ LL++ L+Q +A Sbjct: 430 KDRNGMVTNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSV 489 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ I + + ++LL + ++L S + +++ G +F V+ G Sbjct: 490 TNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEG 549 Query: 328 -----VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSRAI 381 + A T+G+Q+ + + I + SIG +F + ++L +A Sbjct: 550 FDENPLDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQAD 609 Query: 382 SAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLV 441 A + A+ +G+N ++FFDPQ E KR E D+ A+ENHQF + Q QV+ S Sbjct: 610 IAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVD-ESRHPF 668 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPL 499 AE L+R P+ PD I E L++ +G+WVLE +C + WQ L Sbjct: 669 GAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVL 728 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 SVN+SA Q + V + L+ +Y I P L LE+TES +D+ +A + L+ GV Sbjct: 729 SVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGV 788 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNL 616 + +LDDFG GY+ LQ++K LP+D LKID+ FV + D +++ II +A SL+L Sbjct: 789 KFSLDDFGTGYSS---LQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDL 845 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +IAEGVETE Q+ L+ G QG+LF +P+PIE FE S + Sbjct: 846 DVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRKS 890 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 131/451 (29%), Positives = 222/451 (49%), Gaps = 12/451 (2%) Query: 217 IGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TAL 272 IG + L + L+ N A ++ LPN++L + + +AR + AL Sbjct: 303 IGTDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVAL 362 Query: 273 MIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPW 332 M++ + + L +ILL + +L + +A++ G +F V+ G+ + Sbjct: 363 MLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVD 422 Query: 333 HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKG 391 I + ++L +S L I + SIGV++F D ++L A A + A+ G Sbjct: 423 DVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAG 482 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 KN QF+ A L E+D+ A+E +Q A++ QPQ+++ +G + E L+R Q Sbjct: 483 KNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQH 542 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMH 510 P+ P I E GL+V +G WVL E+C+ W + G + ++VNLS Q Sbjct: 543 PERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQ 602 Query: 511 PNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGY 570 N + +L ++ L LE+TES ++ + L L G +A+DDFG GY Sbjct: 603 KNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGY 662 Query: 571 AGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEA 627 + L +++ PI LKID+ F+ + D+++ II LA ++ L+++AEGVETE+ Sbjct: 663 SS---LAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETES 719 Query: 628 QRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 Q +WL G QGFL+A+P+ + E + Sbjct: 720 QAEWLRAKGCDQVQGFLYAKPMTAKQLESHF 750 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 130/475 (27%), Positives = 232/475 (48%), Gaps = 16/475 (3%) Query: 199 KELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALL 256 L + L++ + + G + + + +R E+ + ++ LPN+ LL Sbjct: 487 GSLFWNALSVSPVL--NAAGEVTNYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLL 544 Query: 257 MEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 + + Q + + TA+ I + + L + LL +L + Sbjct: 545 GDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSECVRSIDT 604 Query: 313 LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL- 371 +A+ G +F ++ + + A + +++ + I +L CS G++++ D Sbjct: 605 VARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKDGS 664 Query: 372 TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 A+ L A A + A+ G+N QF+ + RLT E + ALE +F + QP Sbjct: 665 DAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRRALERDEFLVHYQP 724 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ 491 +V++ SG++ E L+R Q P+ + P I E GL+V +G WVL +C AWQ Sbjct: 725 KVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQ 784 Query: 492 ERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 + G+ + ++VNLS Q ++ + + + P + LEV ES +DD AVA+ Sbjct: 785 DDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAM 844 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAI 607 L L+ GV++ +DDFG GY+ L ++K P D++KID+ FV + PG ++++ + Sbjct: 845 LDALKELGVQLTMDDFGTGYSS---LSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTV 901 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 I LA +LNL+++AEG+ETE Q +L QGF F+RP+P FE+ +++ Sbjct: 902 ISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLRDQR 956 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 142/491 (28%), Positives = 260/491 (52%), Gaps = 14/491 (2%) Query: 174 ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 + W INR++ + + +V L + ++ + + +++++ +R Sbjct: 368 VDWRINRILSEKVCFLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICMVLRDISER--KR 425 Query: 234 HYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKE 289 E A ++ LPN+ L + L Q + +K+ + A++ + + + L Sbjct: 426 FEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGH 485 Query: 290 AQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERL 349 ++LL + ++L+ V+ ++++ G +F +I + + P ++ + +++L + S Sbjct: 486 HTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSAPF 545 Query: 350 PIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQK 408 +E+ ++ S+GV ++ D AE+L A +A + A+ +G+N QFF + + Sbjct: 546 RLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQFFSEEMNSRVSE 605 Query: 409 RLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIEC 468 RL+ E+ + +AL ++F + QP+V T+G++V E L+R QQP LPD I E Sbjct: 606 RLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEE 665 Query: 469 CGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 GL++ +G WVL +C AWQE G + +SVN+S Q H N+ + +L +Q Sbjct: 666 TGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQ 725 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 P L LE+TES + +P A+++L L+ G+ +A+DDFG GY+ L +K LP D+L Sbjct: 726 PSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSS---LSLLKRLPADIL 782 Query: 588 KIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFL 644 KIDK FV G+PG D +++A II L ++ L ++AEGVE + Q +L + QG+ Sbjct: 783 KIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYY 842 Query: 645 FARPLPIEIFE 655 F++PLP E + Sbjct: 843 FSKPLPAETLQ 853 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 173/698 (24%), Positives = 327/698 (46%), Gaps = 49/698 (7%) Query: 5 RSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLE---SIARSVREPLSSAI 61 R+L +K+ ++ ++L +F L + + Q E S+A + +SA+ Sbjct: 10 RNLPLKR-KLMLIIMLCCCASLLAASIFFLTRDAKGVYRVQREDLVSLAEIIGANSASAL 68 Query: 62 LKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERP-----------VPVMV 110 + D A+ +A + + A VL ++ Q + + PE P Sbjct: 69 VFDDPESAQRTIAPLASKRSI-LAVYVLTSEGQIMARHVAPEAGNAELPLERLGASPSPA 127 Query: 111 TRLFELP-------VQISLGVYS-LERPANPQP--IAYLVLQADSFRMYKFVMSTLSTLV 160 L + + ++ + L +P + +V+ AD+ +++ + +T+ Sbjct: 128 AVLAAVETIRKTAEKKSAVPGFDCLVQPVYFDYERVGTVVIHADT-ELFRKNLRWTATVT 186 Query: 161 TIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGML 220 +++L+++I S + ++I PL ++ + + A + ++A P DDEIG+L Sbjct: 187 LLFMLVTVIAAYFFSAKLQQMISRPLLDLLSSMKDVSASKNYAIRVAKPS---DDEIGLL 243 Query: 221 VRSYNLN-------QQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQT 269 +N Q+L++ + A P++ LPN+ L + L Q + +Q Sbjct: 244 YDGFNEMLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERNRQA 303 Query: 270 TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ 329 +++ I + +D L ++LL+ + +L +V+ +A++ G +F V V Sbjct: 304 LSVIFIDLDHFKDINDTLGHRTGDLLLIDVANRLSTVVRSCDTVARLGGDEFTVFTQNVM 363 Query: 330 EPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTAR 388 +A + ++ + ++ + ++ SIGV +F D T ++L A A + A+ Sbjct: 364 NADNAAIVAAKLNALFAKPFQLGESEIYVTASIGVTLFPNDGKTVDELLMNADIAMYHAK 423 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 GKN + FD + E A +R+T SD+ ALE +F + QP+V++ +G + S E L+R Sbjct: 424 ACGKNVYKMFDRKMNEHANERVTLLSDLRLALEREEFVLHYQPKVDLLTGNVTSVEALVR 483 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQ 507 P PD I E G +V + WVL +C WQE+ + + ++VNLS Sbjct: 484 WMHPRLGMLAPDKFIRLSEESGFIVELTDWVLRTACTQAKKWQEQNLGSVRVAVNLSPYH 543 Query: 508 LMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFG 567 ++ + +L ++P L +E+TES + + A+ R LR G+ +++DDFG Sbjct: 544 FQRQDVKEAIFSVLDATGLEPALLEIEITESALMQNDEYTCALFRELRELGMTISVDDFG 603 Query: 568 MGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVE 624 GY+ L ++ PI+ LKID+ F+ + D +++ AII +A+SLN+Q++AEGVE Sbjct: 604 TGYSS---LSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTAIIAMAKSLNMQIVAEGVE 660 Query: 625 TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 T Q + L G QGFL +RP+ E + + E Sbjct: 661 TVDQLEKLKDQGCHEIQGFLVSRPVAAESVTQFFTPEN 698 >UniRef50_Q2SDG6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDG6_HAHCH Length = 686 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 170/671 (25%), Positives = 298/671 (44%), Gaps = 23/671 (3%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 ++ SL+ K M V L + + + + VR+P + A Sbjct: 10 VKWRHSLSAKLMNWVLFTALAVGVLLSIGQIIFESMRAVEEMDNEARQTLAIVRDPATQA 69 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQ--FQALRKSFIPERPVPVMVTRLFELPV 118 + D A+ +L + + A + PNQ L K + E M +F Sbjct: 70 VYSIDPDLAQQVLEGLFEKPSIRYAAISHPNQTTLAELSKPLL-ETQSRWMTDAIFGKER 128 Query: 119 QISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCI 178 + ++ ++ P L + D+ + LL +L+L + Sbjct: 129 EYAISLFRP--TPQPTYYGELKIVVDTAPKSALFFERSILIFMTGLLRALLLAFVLHLVY 186 Query: 179 NRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQ 238 + L+ PL+ I L I E L +PR H+ DE+G VR+ N Q ++ H +++ Sbjct: 187 HFLLTAPLKAIINSLLRINPAEPGLQSLPVPRQHEKDELGSWVRAANSLLQSIEEHQQKR 246 Query: 239 N-------ENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVL 287 + + ++ LP ++L + V A Q A+ + + + L Sbjct: 247 QAAEARIIKLSQYDSLTGLPTRSLFTNYIAAAVDDSEALNQKFAVFCVGIDDFKSINEQL 306 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 +Q + LL E+L S + ++ G FA+I V + + +L +S Sbjct: 307 GYSQGDKLLQAFAERLLSQRDGVHTVCRLGGDQFALILFNVSSSYRVAAFAESLLREISR 366 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 IE C+IG+A++ D AE++ +A A+ N QF+ Sbjct: 367 PFEIEEQLTPVSCTIGIAIYPDDARDAEKILQKAEQTMMLAKSVANNHFQFYVASLDSEI 426 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 ++R E D+ A++N + + QPQ+++ S ++V E LLR + P+ PD I Sbjct: 427 RERKKLEKDLSKAIQNDELFLVYQPQIDLNSKQVVGCEALLRWRHPERGLVPPDVFIPIA 486 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 E ++ +G WVL E+C + W+ +G + +++NLSA QL +L+++ +I Sbjct: 487 EANETILEIGDWVLHEACAQVNQWRNQGFNIKVAINLSANQLRQKEFAPHVLKIIESRQI 546 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 + LEVTE+ +++ + A+ LR L G++ A+DDFG GY+ L ++K LPI Sbjct: 547 PTSLIELEVTETSFMENLNQAITSLRHLSEFGIQCAVDDFGTGYSS---LSYLKQLPIRK 603 Query: 587 LKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 +KIDK FV L D+ ++ AII L +SL L +IAEGVET Q +L G +AQG+ Sbjct: 604 IKIDKQFVRDLMKDEDDTQIVHAIIQLGKSLRLDVIAEGVETPRQERFLKHDGCTLAQGY 663 Query: 644 LFARPLPIEIF 654 +++P+P + Sbjct: 664 YYSKPVPPDEL 674 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 135/467 (28%), Positives = 240/467 (51%), Gaps = 18/467 (3%) Query: 203 GHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEML 260 + + L + +E G +V + +R E A +++LPN+ L E L Sbjct: 347 DYYITLSPI---EENGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRTLFHEKL 403 Query: 261 EQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQI 316 + + + + +M I + ++ L + ++LL + +L L ++++ Sbjct: 404 AEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRL 463 Query: 317 SGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQ 375 G +FA+ GV A + Q+++T MSE + ++ I++ SIG++M+ D E Sbjct: 464 GGDEFAIFLTGVTHR-EAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEA 522 Query: 376 LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEM 435 L A +A + A+ +GKN QFF + + K+L E ++ AL+ QF + QP++ + Sbjct: 523 LLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHL 582 Query: 436 TSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI 495 +G+++ E L+R PD P I E GL+V +G WV+ +C+ AWQE G Sbjct: 583 QTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGF 642 Query: 496 M-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPL 554 L ++VN+S Q M N++ + +L + P L LE+TES + + + IL L Sbjct: 643 TQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILNRL 701 Query: 555 RNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-PGDSSMIAAIIMLAQS 613 + GV +++DDFG GY+ L ++ PID LKID+ F+ L P + ++I II +A + Sbjct: 702 KALGVSISIDDFGTGYSS---LSYLSQFPIDRLKIDQSFLRNLNPQNQAIIKTIIHMAHN 758 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 + + +IAEGVET D+L + QG+ +++PLP + +S+L+ Sbjct: 759 MKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEI-DSFLQ 804 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 133/467 (28%), Positives = 242/467 (51%), Gaps = 16/467 (3%) Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVV 264 + +H D G + + + + + + A ++ LPN+ALL E L + + Sbjct: 359 SAAPIHNRD--GQVAGAVIVFHDVSESRAMALKMAHLAQHDFLTGLPNRALLTERLSRAI 416 Query: 265 ----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 + ++ + + + L A + LL + E+L + + + G + Sbjct: 417 GQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQGGDE 476 Query: 321 FAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSR 379 F ++ +++ A + +++L +E I +L SIG++++ D A+ + Sbjct: 477 FVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTVMKN 536 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A +A + A+ G+N QFF + A +RL E ++ AL +F ++ QP++++ SG Sbjct: 537 ADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGM 596 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLP 498 ++ +E L+R Q P+ P + E GL+V +G WVL E+CR + AWQE G+ +P Sbjct: 597 MIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVP 656 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 +SVN+SA++ H + + + +L + P L LE+TES + D ++ +L L+ G Sbjct: 657 VSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMG 716 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 +++A+DDFG GY+ L ++K PI+ LKID+ FV + P D+S++ A+I + ++L Sbjct: 717 MQLAIDDFGTGYSS---LSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLK 773 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +++AEGVETE Q +L QGFLF RPLP + F L ++ Sbjct: 774 QRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLLLNDR 820 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 132/463 (28%), Positives = 236/463 (50%), Gaps = 14/463 (3%) Query: 205 QLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQ-- 262 ++ R + L ++ + ++ +E + A ++ LPN++LL + L Q Sbjct: 447 EVTTARTIWQGKQVELAIVRDITDR--KKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGI 504 Query: 263 --VVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 V + A+M + + + L + LL T+ E+L + +A+I G + Sbjct: 505 VQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLTECVRETDTVARIGGDE 564 Query: 321 FAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQ-LYSR 379 F +I + ++ + +++L +S+ L + ++ SIG+A++ D T Q L Sbjct: 565 FVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLKN 624 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A A + A+ +GKN Q+F + A + L E+ + ALE ++F I+ QPQ+++ SG+ Sbjct: 625 ADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQMDLKSGR 684 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLP 498 LV E L+R Q PD P I E GL++ +G W L+ +C AW + G L Sbjct: 685 LVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLR 744 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 ++VNL +Q + + +L + + P L LE+TES + + +L L+ G Sbjct: 745 VAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMG 804 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 V +A+DDFG GY+ L ++K+ PI+ +KID+ F+ + P D+++++AII +A +LN Sbjct: 805 VSLAIDDFGTGYSS---LSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLN 861 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 L++ AEGVE +Q ++L+ QG+L + PLP F Sbjct: 862 LKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFTRFL 904 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 16/191 (8%) Query: 68 EAEAILASIKPAGVVSRADVVLPNQ----FQALRKSFIPERPVPVMVTRLFELPV---QI 120 + L + + V L + K+ I R VPV + RLF+ + + Sbjct: 173 LGQNFLEDLSHTRIGKTGYVYLFDNHRTIIAHPEKNRIMHRDVPVGINRLFDKSIAGFEG 232 Query: 121 SLGVYSLERPANPQPIAYLVLQ----ADSFRMYKFV--MSTLSTLVTIYLLLSLILTVAI 174 S + R +L A S+ + + + T + + +T+ Sbjct: 233 SGETRNSRRIETLSSFKHLKTTDWILAASYPIVEAYAPLKTNRIYFITVMAVGTSVTLLF 292 Query: 175 SWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH 234 W + + + PL I R + AIP K + + L L + DE+G L+ ++N L +H Sbjct: 293 VWFLMQRLTSPLSLITRHVEAIPDKSGLHN---LINLERKDELGTLINAFNSMILSLDQH 349 Query: 235 YEEQNENAMRF 245 E+ F Sbjct: 350 QNALRESESNF 360 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 145/475 (30%), Positives = 246/475 (51%), Gaps = 14/475 (2%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALL 256 + LV +A R D IG +V ++ + +++ E P++ LPN++L Sbjct: 383 GGRRLVEGTVAPIRNDSDVIIGTVVALKDITE--IKKKDEILYNMEYYDPLTGLPNRSLF 440 Query: 257 MEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 + L+ +A+ + AL+I+ + + L + ++LL + EK+K L Sbjct: 441 SDRLKMALAQSKRNNEMCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDT 500 Query: 313 LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY-GDL 371 +A+I G +F +I +++ A ++L + +E + S+G+ ++ G Sbjct: 501 VARIGGDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGE 560 Query: 372 TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 + ++ A +A + A+ G+N Q + + +RL E+ + A+E +F ++ QP Sbjct: 561 DPQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQP 620 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ 491 Q+++ +GK+V E LLR PD P I E GL+V +G WVLE +CR W Sbjct: 621 QIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWI 680 Query: 492 ERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 E G+ +SVNLSA Q N+V + + + + P L LE+TES + D + + Sbjct: 681 ECGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDV 740 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAI 607 L LR G+RV+LDDFG GY+ L +++ LPID LKIDK FV+ + +S ++ + Sbjct: 741 LNQLRKKGIRVSLDDFGTGYSS---LNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTV 797 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 I LA L+L ++AEGVET+ Q +L K AQG+LF++PLP E E+ ++K Sbjct: 798 ISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLRDKK 852 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 689 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 139/486 (28%), Positives = 238/486 (48%), Gaps = 16/486 (3%) Query: 182 ILHPLRNIARELNAIPAKELVGHQLA--LPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN 239 I LR + + I + G L D G + + + QR E+ Sbjct: 624 IWQTLRREGQWVGEIWNRRKSGESYPEWLSISQVADAKGSVQNYVAVFTDITQRKLSEER 683 Query: 240 EN--AMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQRE 293 A ++ LPN+ALL E ++Q + R Q A++ I + + L + Sbjct: 684 LQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGD 743 Query: 294 ILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIER 353 +LL ++LK L +A+ G +F V+ + + T+ ++++ +++ + Sbjct: 744 MLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILVG 803 Query: 354 IQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTE 412 +L SIG++++ D L A +A + A+ GKN +F+ + + + LT Sbjct: 804 RELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLTL 863 Query: 413 ESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLM 472 E+++ A+E ++F + QP+V++ S K++ AE ++R Q P+ P I E GL+ Sbjct: 864 ENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLI 923 Query: 473 VTVGHWVLEESCRLLAAWQE-RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTL 531 + +G W++ ESCR WQ+ G + ++VNLSA Q + + + LT + P L Sbjct: 924 IDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCL 983 Query: 532 ILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDK 591 LE+TES + + A +L+ + G V +DDFG GY+ ++K PID LKID+ Sbjct: 984 ELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFG---YLKHFPIDSLKIDR 1040 Query: 592 MFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARP 648 FV +P D ++ AII +A SL ++++AEGVET+ Q +L K G QGFLF+ P Sbjct: 1041 SFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEP 1100 Query: 649 LPIEIF 654 L F Sbjct: 1101 LHSHDF 1106 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 138/491 (28%), Positives = 248/491 (50%), Gaps = 21/491 (4%) Query: 188 NIARELNAI--PAKELVGHQLALPRLHQDDEI--GMLVRSYNLN-----QQLLQRHYEEQ 238 ARE++ E +++ L+ +D G++ S +L + L + Sbjct: 297 KEAREIHEHLRAGHEKRTYEIKASPLYNEDHSIRGIIETSRDLTDILNSEAELNEKTQHL 356 Query: 239 NENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREI 294 ++ LPNK L + LE+ + TAL+ I + + L + Sbjct: 357 QFVTTHDQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQ 416 Query: 295 LLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERI 354 LL + ++L + + LA++ G +F +I ++E H T+ + + + I+ Sbjct: 417 LLQEVAKRLSTSIRKTDTLARMGGDEFLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGH 476 Query: 355 QLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEE 413 +L S+G+++ D ++L + A A + A+ G N+ QF+ + A+ R+ E Sbjct: 477 ELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRAKTRIELE 536 Query: 414 SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMV 473 S + A+ QF ++ QPQ ++ SG+LV E LLR Q P P+ I E G+++ Sbjct: 537 SYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVII 596 Query: 474 TVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 +G WVL+E+C WQ+ G + ++VN+S Q P + + ++ I+P L Sbjct: 597 EIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLE 656 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 LE+TES +DD +A+ IL+ L+ G+ +A+DDFG GY+ L ++K P+ LKID+ Sbjct: 657 LEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSS---LSYLKRFPLSRLKIDRS 713 Query: 593 FVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 FV + D+S+ A+I LA S+NL+++AEG+ET+ Q +L + G + QG+L++ P+ Sbjct: 714 FVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPV 773 Query: 650 PIEIFEESYLE 660 E F+ + + Sbjct: 774 AKEPFDHFFTD 784 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 143/454 (31%), Positives = 234/454 (51%), Gaps = 15/454 (3%) Query: 215 DEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D G + + L++ P+++LPN+ L+ LE + R Sbjct: 609 DSQGRPSHYVGVMTDISQLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGG 668 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++ + + + L ++LL L +L + LA++ G +F V+ + Sbjct: 669 RVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENL 728 Query: 329 QEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 Q P A + + +L+++ + + +L SIG++++ D T L A A + Sbjct: 729 QRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQ 788 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G+N +F+ P + A++RL E+ + AL + +F + Q Q++M G+L+ E L Sbjct: 789 AKEEGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEAL 848 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 +R PD I E GL+V +G WVL ++C +W+ RG+ L ++VNLS Sbjct: 849 VRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSG 908 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 QL P++V + +L + L LE+TES +D A+ LR L+ GVR+++DD Sbjct: 909 RQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDD 968 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K LPID LKID+ FV +P DSS + A II +A++L L +IAEG Sbjct: 969 FGTGYSS---LAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEG 1025 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 VET Q D+L + G QG+LF RPLP E F + Sbjct: 1026 VETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQ 1059 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 143/459 (31%), Positives = 242/459 (52%), Gaps = 14/459 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 DE + + + +R EE+ N A ++ LPN+ LL + +EQ + Q Sbjct: 480 RDETSQISHYVAVFLDITERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNN 539 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ I + ++ L + LL + +LK+ L +A++ G +F + + Sbjct: 540 FKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSE 599 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + I + ++++ ++E+ + QL SIG+ ++ D T+ +L A A + Sbjct: 600 LDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQ 659 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N +F+ P A +RL E+ + A+ Q +++ QP+V + SGK+ E L Sbjct: 660 AKDDGRNNFKFYSPDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEAL 719 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSA 505 LR Q P+ + P I E GL+ +G WVL +SC WQ +G + P++VNLSA Sbjct: 720 LRWQHPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSA 779 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 QL N A ++ +L + L+LE+TES + + + IL LR+ GVR+ALDD Sbjct: 780 RQLKQDNFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDD 839 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L +K+LP+D LKID+ FV + P D+S+++A +LA +LNL++ AEG Sbjct: 840 FGTGYSS---LSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEG 896 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 VET+ Q D++ QG+LF+RP+P + +L + Sbjct: 897 VETQEQLDFIRMLNCEEYQGYLFSRPIPASEVVKYFLPD 935 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 139/479 (29%), Positives = 243/479 (50%), Gaps = 14/479 (2%) Query: 186 LRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRF 245 L N + + + A R + +G+++ +++++ + + A Sbjct: 268 LANHTALIGRHGNEYAIEDSAAPIRDQDGNVLGVVLVFHDVSE--ARNMANKMTYLAEHD 325 Query: 246 PVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVE 301 ++ LPN+ LL + L Q + + ALM + + ++ L + LL + Sbjct: 326 YLTGLPNRLLLNDRLNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVAR 385 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +L+S L +++ G +F ++ + + + +++L + I ++ S Sbjct: 386 RLESCLRASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSAS 445 Query: 362 IGVAMFYGDLTAEQLY-SRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+A+F D +L A +A + A+ G+N QFF E + ES + A+ Sbjct: 446 IGIAVFPDDGENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAV 505 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E ++F ++ QP++++ +G++V AE L+R Q P PD I E GL+ +G WV+ Sbjct: 506 ERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVM 565 Query: 481 EESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 E+CR WQ G+ +P++VNLS +QL N + ++ E+L ++P L LEVTES Sbjct: 566 REACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESV 625 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 I + L LR+ GV++ALDDFG GY+ L ++K LPI+ +KIDK F+ + Sbjct: 626 AIHAETEVINWLHKLRSMGVKLALDDFGTGYSS---LSYLKRLPINNVKIDKSFIRDIET 682 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 P D+++I AII ++ L L +IAEGVE Q ++L K G QGF+ +RP+P + F Sbjct: 683 DPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEFA 741 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 148/500 (29%), Positives = 243/500 (48%), Gaps = 20/500 (4%) Query: 178 INRLILHPLRNIA----RELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 R + LR +N + L + + D G + + QR Sbjct: 339 FYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGPD--GTFTHYAGIFSDITQR 396 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E + A P++DLPN+ LLME L + R ALM + + + L Sbjct: 397 KLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTL 456 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 A + LL T+ +L L +A++ G +F ++ +++ Q+++ + Sbjct: 457 GHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRVQG 516 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLTAEQLYS-RAISAAFTARHKGKNQIQFFDPQQMEAA 406 + ++ + S+G+A++ D + ++ A +A + A+ +GKN QFF + Sbjct: 517 MVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNAST 576 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 RL ES++ AL +F + QP+V++ G + E LLR + + P I Sbjct: 577 LARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIA 636 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E L+ T+G WVLE++CR W G + ++VNLS+ Q+ ++VA + +L Sbjct: 637 EESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILEHSN 696 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + L LE+TES +D+ + L+ L+ GVR+A+DDFG GY+ L ++K LPID Sbjct: 697 LPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSS---LSYLKQLPID 753 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 VLKID+ FV L D+++ +AII + QSLNLQ +AEGVE E R +L G QG Sbjct: 754 VLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQG 813 Query: 643 FLFARPLPIEIFEESYLEEK 662 +LF+RP+P E+ LE + Sbjct: 814 YLFSRPVPAATMEQLLLESQ 833 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 145/450 (32%), Positives = 234/450 (52%), Gaps = 12/450 (2%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 ++E G + + + R + E+ A ++ LPN+ LL + + +AR + Sbjct: 241 ENESGDVTHFIGVLNDVTARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGRL 300 Query: 270 TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ 329 TA+M + + + A + L+ + ++ + L +A++ G +F V+ + Sbjct: 301 TAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDLA 360 Query: 330 EPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTAR 388 A L ++ +SE + I ++L SIGVA+ D E L A A + A+ Sbjct: 361 SIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAK 420 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 +G+N F+ P+ A++RLT ES++ AL + QPQV++ +G L AE L+R Sbjct: 421 ERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVR 480 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQ 507 + P+ LP I E GL+V +G VL +CR W+E G L ++VNLS Q Sbjct: 481 WRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQ 540 Query: 508 LMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFG 567 ++V + ++L L LE+TES + D +VA L LR G+ +A+DDFG Sbjct: 541 FRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFG 600 Query: 568 MGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVE 624 GY+ L ++K PID LKID+ F++G+P D++++ AII +A+SL L ++AEGVE Sbjct: 601 TGYSS---LSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVE 657 Query: 625 TEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 T AQR++L G QGFLF R +P E F Sbjct: 658 TPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 144/459 (31%), Positives = 231/459 (50%), Gaps = 14/459 (3%) Query: 214 DDEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RK 267 DE G + + L+ E A +++L N+ L E L Q +A + Sbjct: 443 RDEDGQIRNHIGSFIDISELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNR 502 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 ALM+I + + L + LL+ + ++L + I+A++ G +F + G Sbjct: 503 MQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPG 562 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFT 386 + P A L + +S I+ +LR SIG+ ++ GD + L A A + Sbjct: 563 IGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYH 622 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+ QFF A +R+ ESD+ A+ +F + QPQ+++ SG +V E L Sbjct: 623 AKANGRGNYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEAL 682 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 +R Q P P I E G++ +G WVLEE+CR L WQ RGI L +S+NLSA Sbjct: 683 IRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSA 742 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q + + A + ELL + L LEVTES + P ++++++ L ++G+ +++DD Sbjct: 743 GQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDD 802 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K LPI LKID+ FV+ + P D+ + ++LA L L+++AEG Sbjct: 803 FGTGYSS---LAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEG 859 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 VETEAQ +L G QG+L ++PLP + E Sbjct: 860 VETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIRNN 898 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 134/484 (27%), Positives = 241/484 (49%), Gaps = 14/484 (2%) Query: 189 IARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFP 246 I RE + + L + ++ G + + + + +R E+ A Sbjct: 99 INREEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDITERKQSEEQIQYLATHDS 158 Query: 247 VSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ + ++L + + A++ I + ++ L + LL+T+ + Sbjct: 159 LTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMANR 218 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 ++ L I+ ++ G +F ++ ++ A + Q++L+ + L + + R SI Sbjct: 219 FRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRVTASI 278 Query: 363 GVAMFYGDLTAEQ-LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+ ++ D EQ L A A + A+ +GKN QF+ P + +RL E+++ ALE Sbjct: 279 GICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLRKALE 338 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 H+F + Q + + +GK+ E L+R Q P+ P I E GL+V +G WVL Sbjct: 339 RHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLR 398 Query: 482 ESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +C WQ++G+ + ++VNLSA Q N++ D+ L + P L +E+TE Sbjct: 399 AACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMI 458 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP-- 598 + D A+ IL ++ GVR+A+DDFG+GY+ L H+K PID LK+D F+ +P Sbjct: 459 MQDAERAIRILTGIKALGVRLAIDDFGVGYSS---LAHIKRFPIDTLKVDSSFIRDIPAN 515 Query: 599 -GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 D ++ AII + ++L+L +IAEGVET+ Q ++L + QG+ F++P+ E F Sbjct: 516 REDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFTRF 575 Query: 658 YLEE 661 L Sbjct: 576 MLAH 579 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 159/566 (28%), Positives = 271/566 (47%), Gaps = 29/566 (5%) Query: 118 VQISLGVYSLERPANPQPIAY----LVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA 173 V+ S Y L P I + LV+ + R+ + + +++ I L + L+ A Sbjct: 255 VRESEERYRLLLSHLPVGIFHYNTDLVITYCNDRLAELLHNSV--EHVIGLDMKLVKDQA 312 Query: 174 ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 I + + + N A + + H D G + + Q + + Sbjct: 313 ILPSLRKALEGERSNFEGHYLATYSDAEGWAYITCTPFH--DHNGQIAGGIAIVQDITEH 370 Query: 234 HYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E+ N A P++ LPN+ LL++ L+ +A AL+ I + + L Sbjct: 371 KAAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALNDTL 430 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVL 342 ++LL + ++L S + +A++ G +F V+ + + +G+++L Sbjct: 431 GHDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGEKIL 490 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQ 401 ++ + + R SIG +F G A E+L RA A + A+ G+N ++FFD Q Sbjct: 491 AMLGLPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQAGRNTVRFFDQQ 550 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 +A R+ E ++ AL+ QF + Q QV+ SG+ + AE L+R P+ PD Sbjct: 551 MQDAVTARVALEGELHKALDRQQFRLHYQIQVD-ASGRPLGAEALIRWMHPERGLVPPDQ 609 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNLSALQLMHPNMVADMLE 519 I E L++ +G WV++ +C L WQ+ L L+VN+SA Q + V + Sbjct: 610 FIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRA 669 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 + R+ I P L LE+TES +++ + + L+ GV+ +LDDFG GY+ LQ++ Sbjct: 670 TVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSS---LQYL 726 Query: 580 KSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 K LP+D +KID+ FV + D ++ II +AQ+L L +IAEGVETE QR +L G Sbjct: 727 KRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNG 786 Query: 637 VGIAQGFLFARPLPIEIFEESYLEEK 662 QG+LF +P+P+E FE ++ Sbjct: 787 CTHFQGYLFGKPVPVEQFEAMLQPDR 812 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 154/570 (27%), Positives = 281/570 (49%), Gaps = 32/570 (5%) Query: 107 PVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLL 166 + +L ++ L ++E +N ++ AD R + + + + Sbjct: 321 RSLYLQLESRARKLQLYDRAIEESSN----GIVICLADKTRDNPVIYANRAFSIMTGYSH 376 Query: 167 SLILTVAISWCINRLILHP----LRNIARE--------LNAIPAKELVGHQLALPRLHQD 214 I+ ++ + + + P LRN R N L +++AL +H Sbjct: 377 DEIIGLSPRFLLANDLAQPGLERLRNCMRHGGSARAILRNYRKDGSLFWNEVALAAVH-- 434 Query: 215 DEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 +E G + ++ + R E A ++ LPN+ LL + LE + + Sbjct: 435 NEHGEIAHFISVFNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHT 494 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++++ + + L + L+ + ++ + +A++ G +F +++ + Sbjct: 495 KLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDI 554 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTA 387 ++ A TL Q++L +++ I ++ SIG+AMF D ++L+ A +A + A Sbjct: 555 RDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRA 614 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G+N QF+ + ++RL E + NA+ HQ ++W QP++++ SG + SAE L+ Sbjct: 615 KDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALI 674 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSAL 506 R + P P I E GL++ +G WV+EE+ R LA W+++ + +++N+SA Sbjct: 675 RWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAY 734 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 QL H + +++ L + P +L +EVTE+ + AV L+ LR G+RVALDDF Sbjct: 735 QLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDF 794 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K PID+LKID+ FV + D +++ II LA +LN+ ++AEGV Sbjct: 795 GTGYSS---LTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGV 851 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 ETEAQ ++L G QG+ F +PLP E Sbjct: 852 ETEAQLEFLRTNGCDEVQGYYFCKPLPSEE 881 >UniRef50_C6XC99 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XC99_METSD Length = 682 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 190/685 (27%), Positives = 326/685 (47%), Gaps = 45/685 (6%) Query: 3 VSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAIL 62 + L I Q +V A L+ VF V+L Q + L + A ++ LS+A+ Sbjct: 11 IRTKLLILQF-IVTATALIVVF---AVMLVFQYQSALTDIENDLNAQAEILKSNLSAAVA 66 Query: 63 KGDIPEAEAILASIKPAGVVSRADVVLPN--QFQALRKSFIPERP-VPVMVTRLFELPVQ 119 D A+ IL+S++ ++RA+V L N +F K P P + + T L + + Sbjct: 67 FEDKKTADEILSSLRLVPSINRAEVYLYNGSRFSHYAKEANPHAPDIRIPYTGLHRMNRR 126 Query: 120 ISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCIN 179 Y L P I Y+ + + + + +V + LL+++ I+ +N Sbjct: 127 -----YELILEQKPLAILYIEINLNKLNAR---LGLFALVVLMAGLLAMLAARLIAARLN 178 Query: 180 RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYN------------LN 227 LI PL ++ ++ + A++ G + + R DE G L + + L Sbjct: 179 LLITEPLSSLTTFVSRVSAEQNYGLRTNMAR---RDEFGTLAKGIDGMLLSLYNHGKRLE 235 Query: 228 QQLLQRH--YEEQNENAMRFPVSDLPNKALLMEML----EQVVARKQTTALMIITCETLR 281 +L QR E+ ++ A V+ LPN+ E L E R+Q+ LM I + + Sbjct: 236 DELSQRKLAEEQLDKLAYYDTVTHLPNRHFFNEQLTLMLEHAAQRQQSCYLMFIDLDNFK 295 Query: 282 DTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQV 341 L + LL ++ L P IL +I G +FA+I Q + Sbjct: 296 SVNDTLGHLAGDSLLREAGSRILQTLVPGSILCRIGGDEFAIILRD-QPLSAIDATASAI 354 Query: 342 LTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDP 400 + + SE+ I ++ SIG++ F D L A +A + A+ GKN +++ Sbjct: 355 IALFSEKFVINAHEVFVGASIGISNFPADADHVSGLLRNADTAMYWAKADGKNTFRYYSR 414 Query: 401 QQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPD 460 + ++A ++ S + AL H+ ++ QP + + + K+V E LLR QP+ PD Sbjct: 415 ELEDSAHQQEKLMSMLQKALPGHELELYYQPIMALETRKIVGFEALLRWHQPELGNIRPD 474 Query: 461 GLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLE 519 I E GL++ +G WVLE +C AWQER L ++VN S Q HPN+V +++ Sbjct: 475 VFIPLAEASGLIMQIGEWVLETACLQAKAWQERYASGLIMNVNFSGRQFHHPNIVQNIVN 534 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 ++ + + L +E+TES +D + + LR AG+ +A+DDFG GY+ + ++ Sbjct: 535 MVNKVGLDARLLNIELTESVLMDQSSVMIEKMHMLRQAGLDIAIDDFGTGYSSM---SYL 591 Query: 580 KSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 + PI+ +KID+ F++GLP D S++ AI+ LA++L L +AEGVET+AQ ++L G Sbjct: 592 RQFPINTIKIDRSFIKGLPDDPEGSAIAQAILALAKTLKLSAVAEGVETQAQAEFLRANG 651 Query: 637 VGIAQGFLFARPLPIEIFEESYLEE 661 QG+LF+ P+ + E ++ Sbjct: 652 CEKIQGYLFSPPVTADDAERLICQQ 676 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 142/517 (27%), Positives = 250/517 (48%), Gaps = 27/517 (5%) Query: 161 TIYLLLSLILTVAISWCINRLILHPLRNIARELNAI------------PAKELVGHQLAL 208 +LL I+ L+ P++ + EL ELV +A Sbjct: 347 ATCVLLGFSRNELTGADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVEAMAT 406 Query: 209 PRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA--- 265 H DD+ + + +++ + +R EE A ++ LPN++LL + L Q VA Sbjct: 407 QVPHGDDQ-ALCLMFHDITDR--RRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGAR 463 Query: 266 -RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI 324 R Q AL++ + + L + LL ++ +++S + A++ G +F ++ Sbjct: 464 RRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIV 523 Query: 325 ANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISA 383 + A+T+ + +++ + ++ S+G+++F D E L +A +A Sbjct: 524 LTNLTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTA 583 Query: 384 AFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSA 443 + + G+N QFF + + RLT E+ + ALE + + QP++E +G +V Sbjct: 584 MYHIKESGRNSFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGM 643 Query: 444 EVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVN 502 E L+R PD P I E GL+V +G WVL +C W G L +SVN Sbjct: 644 EALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVN 703 Query: 503 LSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVA 562 +SA Q + + V ++ ++ + + P + LE+TE+ + V I+ LR G+ ++ Sbjct: 704 ISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITIS 763 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMI 619 +DDFG GY+ L ++K P+DVLKIDK F++ + D++++A II +A ++++++ Sbjct: 764 IDDFGTGYSS---LNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVV 820 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 AEGVET Q L + QGF F+RPLP E FE Sbjct: 821 AEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFER 857 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 138/477 (28%), Positives = 244/477 (51%), Gaps = 17/477 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKA 254 I + E LA+ EI +++Q L+ + + ++DLPN+ Sbjct: 418 KIKSLERAKDVLAIMAARVSAEI-----EREISEQRLRDNEDHLEYLVYHDVLTDLPNRQ 472 Query: 255 LLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 L + L+ ++ ++ I + + L + LL + +L+ + Sbjct: 473 LFRDRLQHAISMASLGQHQVGVLFIDLDHFKKINDSLGHEVGDRLLCEVARRLRLCIGGL 532 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 +A++SG +FA+I + + + I + Q+V ++E + +E +L SIG++++ GD Sbjct: 533 DTVARLSGDEFAIILDQLNNIENVILIAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGD 592 Query: 371 L-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 L A +A F A+ G++ +F+ E A + L E + A++ + ++ Sbjct: 593 GKDVVSLLKCADAAMFKAKELGRDNYRFYTAGLNERASELLALEGALRQAVDKNHLVVYF 652 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QPQVE+ S +++ AE L+R Q P+ P I E GL+V++G WVL +SC Sbjct: 653 QPQVELASRRIIGAEALVRWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQ 712 Query: 490 WQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAV 548 WQ G + +SVN+SA Q ++V + +L + P L LE+TES ++D AV Sbjct: 713 WQVAGYPPMRISVNMSARQFRQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDGAV 772 Query: 549 AILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIA 605 L L + G+++++DDFG GY+ L ++K PI LKID+ FV + P D+++ Sbjct: 773 ERLVELHSLGIQLSIDDFGTGYSS---LAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIAT 829 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 A+I LA+++NL +IAEG+E + Q +L G G QG+LF+RP+P FE+ + ++ Sbjct: 830 AVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRPIPAHEFEQLLVRQQ 886 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 133/462 (28%), Positives = 224/462 (48%), Gaps = 14/462 (3%) Query: 205 QLALPRLHQDDEIGMLVRSYNLNQQLLQRHYE--EQNENAMRFPVSDLPNKALLMEMLE- 261 + + +D E + + + R + A ++ L N+ L L+ Sbjct: 345 RTLMINGVRDPETREITHFIAIFSDITARKRAEADIQHLAYHDTLTGLANRFSLTARLQL 404 Query: 262 ---QVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISG 318 + Q A+M + + + L + LL + +L+ + +A++ G Sbjct: 405 SVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRDAVRETDTVARLGG 464 Query: 319 YDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLY 377 +F V+ G+ + ++L +S ++ +L SIG+++F D L Sbjct: 465 DEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTELHTTASIGISLFPDDSADPAALM 524 Query: 378 SRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTS 437 A +A + A+ G+ + QF+ + AA RL E + A+ +F +W QPQ + Sbjct: 525 RNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLERKLRGAVARGEFELWYQPQFDSRH 584 Query: 438 GKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM- 496 G L E L+R + P P I E G++V +G WVL E+CR W + G+ Sbjct: 585 GHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPE 644 Query: 497 LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRN 556 L +SVNLS QL +V + L ++PG L LE+TES +D+P AVA+L+ L+N Sbjct: 645 LRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEITESAVMDNPDEAVALLQALKN 704 Query: 557 AGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQS 613 GVR+A+DDFG G++ L ++K P+D LKID+ F+ + D++ ++AA + LA + Sbjct: 705 LGVRIAIDDFGTGHSS---LSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAHN 761 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 L L +IAEGVE+ Q L + G QGF F+RP+ ++ E Sbjct: 762 LGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADVVE 803 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 131/463 (28%), Positives = 219/463 (47%), Gaps = 24/463 (5%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKALLMEMLEQVVARK----- 267 D L S Q + +R E+ A ++ L N+ LE + R Sbjct: 411 DNHDKLQGSIITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDG 470 Query: 268 -------QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 AL + + + L + LL + +LK+ L + ++ G + Sbjct: 471 DRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDE 530 Query: 321 FAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSR 379 F +I N + + + Q++ ++ I+ +L SIG++++ D E L Sbjct: 531 FTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKN 590 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A A + A+ + +FF + +R+ E+++ NAL++ Q I+ QP V+ ++ + Sbjct: 591 ADIAMYAAKEE-NQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVD-STNQ 648 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LP 498 +V E LLR P+ P I E GL+V +G WVL +C+ W E G Sbjct: 649 IVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFY 708 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 ++VNLS Q P++V + ++L + P L LEVTES ++ P A+A ++ LR G Sbjct: 709 VAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKG 768 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLN 615 + ++DDFG GY+ L ++K PID LKID+ FV D +I II +A++L Sbjct: 769 IHFSIDDFGTGYSS---LSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLG 825 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 + +AEGVE + Q+D+L G + QG+ F RP+P E FE+ Sbjct: 826 MDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDML 868 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 158/545 (28%), Positives = 264/545 (48%), Gaps = 28/545 (5%) Query: 137 AYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHP----LRNIARE 192 A ++ AD + + VT +L + I+ P LR RE Sbjct: 538 AIVISHADRAADNPIIYVNPAFTVTTGYGADEVLGRNARFLIDNDWDQPAVERLREAVRE 597 Query: 193 --------LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENA 242 +L+ ++++L + D G + + + +R + E + A Sbjct: 598 GGDARVTLRTYHKDGQLLWNEISLASI--RDAQGEVSHFIAIFNDVTERVRYEAELEQQA 655 Query: 243 MRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLT 298 ++ L N+ LL + +++ + R A+M++ + + L A + LL Sbjct: 656 THDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQE 715 Query: 299 LVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRP 358 +L + + +A++ G +F V+ + + A L +VL ++E + + ++ Sbjct: 716 TARRLSASVRRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVA 775 Query: 359 HCSIGVAMFYGDLTAE-QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 SIGV+++ D A L A A + A+ G+N+ QF+ P+ E +RL E+ + Sbjct: 776 TGSIGVSLYPRDGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLR 835 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 ALEN + + QP+V + G+++ AE L+R + P P I E GL+V +G Sbjct: 836 RALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGE 895 Query: 478 WVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 WV++ +CR L AW + G+ + ++VN+SA Q H + + L +R+ PG L +EVT Sbjct: 896 WVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVT 955 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 ES + +P + LR L+N GVR++LDDFG GY L ++K PID +KID+ FV Sbjct: 956 ESAVMCEPERTIFTLRELKNIGVRISLDDFGTGY---CSLNYLKRFPIDSIKIDRCFVTD 1012 Query: 597 L---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 L D+++ I+ LA SLN +IAEGVE EAQ D+L + G QGFLF+RPLP Sbjct: 1013 LATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAE 1072 Query: 654 FEESY 658 F Sbjct: 1073 FARLL 1077 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 146/488 (29%), Positives = 235/488 (48%), Gaps = 25/488 (5%) Query: 188 NIARELNAIPAKELVGHQLALPR-----LHQDDEI-----GMLVRSYNLNQQLLQRH--Y 235 IAR L E + H++ P LH+D E+ G + Q + +RH Sbjct: 374 AIARCLEHGLPYE-IDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDITERHDYQ 432 Query: 236 EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQ 291 A PV+ LPN+ L + L+ +A AL+ + + ++ L Sbjct: 433 NRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMM 492 Query: 292 REILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPI 351 + LL E+L + +A+ G +F ++ ++ A ++V+ M + Sbjct: 493 GDELLRQTAERLLGCVREGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRL 552 Query: 352 ERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRL 410 + + SIG++++ D E L A SA + A+ +G +F+ P A +RL Sbjct: 553 GEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERL 612 Query: 411 TEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCG 470 ++ + ALE QF + QPQ+++ SG++ E L+R Q P+ P I E G Sbjct: 613 LLQNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTG 672 Query: 471 LMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPG 529 L+ +G WVL + R + WQ+RG+ L LSVNLS Q HP++ + +L ++ Sbjct: 673 LIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAE 732 Query: 530 TLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKI 589 L LE+TE I D V L + GVRV++DDFG G++ L ++K LP+ LKI Sbjct: 733 RLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSS---LAYLKRLPVHALKI 789 Query: 590 DKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFA 646 D+ FV+G+ D+++ A+I L ++L LQ+IAEGVET Q +L + G QGF A Sbjct: 790 DREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIA 849 Query: 647 RPLPIEIF 654 RP+P Sbjct: 850 RPMPAGEL 857 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 135/460 (29%), Positives = 231/460 (50%), Gaps = 16/460 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 DE G ++ + + + QR E+ A ++ L N+ LL + LE + + Q Sbjct: 783 DESGKIINFIGVKEDITQRKLNEKRLEYMATHDGLTGLANRTLLYDHLEIALHQSQRSKK 842 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++++ + + L + +L + ++LK + +A++ G +F V+ V Sbjct: 843 LVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLGGDEFVVLLTDV 902 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTA 387 ++ A + +L ++E + +L S G+ + D L A A + A Sbjct: 903 RDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILLRNADIAMYKA 962 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + +G F+ + E K L E+ + ALE ++F ++ QP+VE +G+++ E LL Sbjct: 963 KAEGCGLY-FYSHEMNEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHATGRIIGCEALL 1021 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSAL 506 R + P P I E GL+V +GHWVL E+CR W+ G+ L ++VN+SA Sbjct: 1022 RWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPPLTMAVNISAR 1081 Query: 507 QLMH-PNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q N++ + L R ++ P L LE+TES + D A +R ++ GV ++LDD Sbjct: 1082 QFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDD 1141 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L +++S P+D LKID+ F+ + D ++++ +II +A +L LQ +AEG Sbjct: 1142 FGTGYSS---LNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTVAEG 1198 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VE Q +A G QG+LF+RPLP E F +L K Sbjct: 1199 VENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALFLANK 1238 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 131/481 (27%), Positives = 243/481 (50%), Gaps = 18/481 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLP 251 N L + L + + D+ G + +++ + A ++ LP Sbjct: 428 NYRKNGSLFWNDLYIAPVKDDE--GKTTHFVAAMSDITPMKQYETTLHRLASHDVLTGLP 485 Query: 252 NKALLMEMLEQVVARKQTTA----LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ALL + LE +A ++++ + + + ++LL + ++L++ + Sbjct: 486 NRALLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASV 545 Query: 308 SPRMILAQISGYDFAVIANGVQE--PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 +A++ G +F ++ + ++ + Q+++ + + L I+ + CS+G+A Sbjct: 546 RESDTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIA 605 Query: 366 MFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 ++ D L + A A + ++ G+N QF+ P + A +RL E ++ +A+E ++ Sbjct: 606 VYPNDGADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELNE 665 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 + QPQV++ +G +V E L+R P P I E GL++ +G WVL+ +C Sbjct: 666 LVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTAC 725 Query: 485 RLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 R AWQ+ G L ++VNLSA Q +++ + + L ++ L +E+TES + D Sbjct: 726 RQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMAD 785 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GD 600 + LR L++ GV++++DDFG G++ L ++K PID LKID+ FV + D Sbjct: 786 IERNILTLRDLKSLGVQLSVDDFGTGHSS---LAYLKRFPIDTLKIDRSFVRDIAINQDD 842 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +S++++II LA +L L +IAEGVET +Q D L G QG+ F +PLP + E L Sbjct: 843 ASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLLLN 902 Query: 661 E 661 E Sbjct: 903 E 903 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 121/461 (26%), Positives = 220/461 (47%), Gaps = 19/461 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D+ G + + + + +R E+ A ++ LPN+ L + L+ +A Sbjct: 412 RDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHG 471 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+M + + + L + +L+ ++ + +A++ G +F V+ Sbjct: 472 QQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPE 531 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFT 386 + L ++V+ + + ++ +L SIG+A++ D T E L A +A + Sbjct: 532 LDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYR 591 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N Q + + +RLT ES + +AL +F + Q +V+ G++ E L Sbjct: 592 AKDLGRNSYQLYTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEAL 651 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 +R P+ P I E G++ +G WVL +CR W + G+ + ++VN+SA Sbjct: 652 VRWHHPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSA 711 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q + ++ + L + P L LE+TE+ + VA+L+ LR GVR+++DD Sbjct: 712 QQFVETDVPEVVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDD 771 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL--------PGDSSMIAAIIMLAQSLNLQ 617 FG GY+ L ++K +PID LK+D+ FV + + +++ II LA +L L+ Sbjct: 772 FGTGYSS---LSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLK 828 Query: 618 MIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 IAEGVET Q ++L G QG+L +RP+ E + Sbjct: 829 AIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGEDLISLF 869 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 129/454 (28%), Positives = 238/454 (52%), Gaps = 13/454 (2%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D G++ ++ + + R E+ A ++ LPN+ L M+ L+Q +A+ Q Sbjct: 461 RDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYN 520 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 ALM++ + + L A ++LL +L L +A++ G +F ++ Sbjct: 521 RKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPD 580 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + + A + +++L ++ + + SIG+A+F D L A +A + Sbjct: 581 LTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYR 640 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 ++ +GK ++F P+ A + + ES + +A+E ++ + QP V+ +G+LV AE L Sbjct: 641 SKREGKGVFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEAL 700 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSAL 506 LR P P+ I E GL++++G WVL +CR A+WQ + ++VN+S Sbjct: 701 LRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISGK 760 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q +V + L + P L LE+TES ++ ++I++ L + GV A+DDF Sbjct: 761 QFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDF 820 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G G++ + +++ P D LKID+ F++ L GD+ ++ +II +A S++L+++ EGV Sbjct: 821 GTGFSSI---SYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGV 877 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 ET QR++L +G IAQG+L++RP+P + F+E Sbjct: 878 ETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQEL 911 >UniRef50_D0ZGP0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Edwardsiella RepID=D0ZGP0_EDWTE Length = 668 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 281/661 (42%), Positives = 427/661 (64%), Gaps = 17/661 (2%) Query: 12 MAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEA 71 MA+V++V LV V IF + LFH VQQ + + Q++SIA+SVR PL+ A+L D+ +A+ Sbjct: 1 MALVSSVALVIVCIFTVIQLFHFVQQRKDDYGQQMQSIAQSVRLPLADAMLNMDVAKAQQ 60 Query: 72 ILASIKPAGVVSRADVVLPN-QFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERP 130 IL ++ +G+++RAD+VLP+ + Q LR F RPVP RLF LP+Q+S +Y ++R Sbjct: 61 ILDGLRASGILARADIVLPHHEVQVLRGHFPAARPVPRWAGRLFHLPLQLSTPLYGVDRG 120 Query: 131 -ANPQ-PIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRN 188 A P P+ YL+LQ DSFR+Y+F+++T +T+V+ YLLL+LILTVA+SWC+NRL++HPLR Sbjct: 121 RATPDHPLGYLILQVDSFRLYRFILTTFATMVSTYLLLALILTVAVSWCMNRLLVHPLRA 180 Query: 189 IARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVS 248 +AREL ++P + HQL LP H DDE+G+LVR+YN NQQ L++ + ++ + R+P + Sbjct: 181 LARELRSMPLEAPHYHQLPLPPHHSDDELGLLVRTYNRNQQALEKTRQTMSQLSTRYPQT 240 Query: 249 DLPNKALLMEMLEQVV-ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 +LP +AL + +LEQ A ++ +M+++ TL++ GVL QR++LL+TLVE+L Sbjct: 241 NLPGQALFVSLLEQQCQAEREGQCVMMVSIPTLQEAMGVLDGGQRDMLLMTLVERLHEGT 300 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 SP +LAQ S F ++A P A+ Q++++++++ + ++ + LRP +IG+AM Sbjct: 301 SPASLLAQASQDGFLILARDAARPSDAMQQAQRLMSLLTQPVTLDNLALRPTAAIGIAMR 360 Query: 368 YGDLTAEQ----------LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 L + L ++A SA A GKN++ FF+PQ E + RLT+E++IL Sbjct: 361 RPSLETSEAECELSPTERLLTQARSALNMALTDGKNRVLFFEPQLAERVKARLTQENEIL 420 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 NAL F ++LQPQ+++ S +L AE L+R + DG P I E G +V +G Sbjct: 421 NALRQGDFELYLQPQIDLRSQRLAGAEALIRWHRQDGGCSEPSQFIPLAEEQGGIVALGE 480 Query: 478 WVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 WVL+E+ R+L WQ RG+ +PLS+N+SALQL+ + LL ++ I L LE+TE Sbjct: 481 WVLKEAVRILVDWQRRGLTIPLSLNVSALQLVDARFGQRLETLLQQHAISAQRLHLEITE 540 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 + I D A L LRN GVRVALDDFGMGYAG L +++ LP+D+LKIDK F++ + Sbjct: 541 TAYISDIRRAADTLDRLRNQGVRVALDDFGMGYAG---LNYLRHLPVDILKIDKSFIDQI 597 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 P D +++ + +A+ L+L ++AEGVET+ Q DWL G+ AQG+ F+ L F Sbjct: 598 PLDGALVRIVGSIAEVLSLDVVAEGVETQGQCDWLLANGIHYAQGYFFSPALSQRDFLAK 657 Query: 658 Y 658 Y Sbjct: 658 Y 658 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 129/450 (28%), Positives = 225/450 (50%), Gaps = 15/450 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D G + + +R EQ A ++ LPN+ L + L + + Sbjct: 1052 DIKGETSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANN 1111 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ + + + + ++LL ++L++ + +A++ G +F +I GV Sbjct: 1112 IVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGV 1171 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTA 387 + A + ++VL +E L SIG++++ D A+ L A +A + A Sbjct: 1172 AKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHA 1231 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G+N QF+ + E A + + E+ + A+ ++ ++ QP+ + G L E LL Sbjct: 1232 KSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALL 1291 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSAL 506 R + P I E G++ +GHWV+ +C+ LA W G + ++VNLSA Sbjct: 1292 RWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSAR 1351 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 QL ++++ + L + +L LE+TES + +P +V+IL L+ G+ +A+DDF Sbjct: 1352 QLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDF 1410 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K PID LKID+ FV + P D+++ +AII LA SL L ++AEGV Sbjct: 1411 GTGYSS---LSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGV 1467 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 ET+AQ ++L G QGFL ++PL + Sbjct: 1468 ETQAQLNFLGLQGCDEVQGFLLSKPLSAKD 1497 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 133/433 (30%), Positives = 228/433 (52%), Gaps = 12/433 (2%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVL 287 + + E A ++ LPN+ LL + +EQV+ ++ A++ I + + L Sbjct: 442 KEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSL 501 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 ++LL + ++LKS + +A+ G +F V+ N + E A + Q++L + Sbjct: 502 GHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFAL 561 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 I + +L SIG+A+F D AE L + A + A+ G+N QFF + ++A Sbjct: 562 PFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSA 621 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +R D+ ALE ++ ++ QP ++M S L E LLR + P+ PD I+ Sbjct: 622 YERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLA 681 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYR 525 E GL++ +G WV+ C + AWQE+G +P +++NLSA Q +++ ++ +L+ Sbjct: 682 EETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSETG 741 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 ++ + LE+TES ID+ V L L G+ +++DDFG GY+ L ++K PI Sbjct: 742 VKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSS---LSYLKQFPIH 798 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV L D +++AAII +A SL +++IAEG+E E Q D+L QG Sbjct: 799 TLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQG 858 Query: 643 FLFARPLPIEIFE 655 + F++P+ + E Sbjct: 859 YYFSKPVTVSEIE 871 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 130/452 (28%), Positives = 226/452 (50%), Gaps = 14/452 (3%) Query: 220 LVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALM 273 + +++ + R E+ A ++ LPN+A + L +AR + A++ Sbjct: 384 ITNYVGISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAIL 443 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 + + + L + LL + ++L LA+ G +F ++ ++ Sbjct: 444 FLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAED 503 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGK 392 A +++L +++E ++ ++ SIG++++ D + L A A + A+ GK Sbjct: 504 AAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGK 563 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 N QF++ +RL E D+ AL+ ++F + QP+V + +G +V AE L+R P Sbjct: 564 NDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLP 623 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHP 511 D P I E G ++ +G WVL +C WQ+ G+ P +SVNLS Q Sbjct: 624 DRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKD 683 Query: 512 NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYA 571 N+ + + +L + PG L LE+TES +++ AVA L+ L GV VA+DDFG GY+ Sbjct: 684 NLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYS 743 Query: 572 GLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQ 628 L ++K PI LKID+ FV +P D+++ +II L ++LNL+++AEGVET+ Q Sbjct: 744 S---LGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQ 800 Query: 629 RDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 L AQG+LF++P+ + E + Sbjct: 801 LTVLRNYQCDEAQGYLFSQPVDADRMTEFLVN 832 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 146/482 (30%), Positives = 251/482 (52%), Gaps = 23/482 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N L + DD G ++ + QR ++ N A+ P+++LP Sbjct: 775 NRAKDGSLYWVDTTIAPFIGDD--GKPQSYISIRTDITQRKAAEDKSNYLALYDPLTNLP 832 Query: 252 NKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL++ L +A T AL+ + + + L ++LL + E L + + Sbjct: 833 NRRLLLDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACV 892 Query: 308 SPRMILAQISGYDFAVIANGVQEPW-----HAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +A++ G +F VI G+ E A +G+++L E + + S+ Sbjct: 893 REGDTVARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSV 952 Query: 363 GVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+ +F +L +++L +A A + A+ G+N + FFDP+ E Q R+ E ++ AL+ Sbjct: 953 GITLFGKNNLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDMEHELRKALD 1012 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++F ++ Q QV ++ + V AE L+R P+ P+ + E CG+++++G WV++ Sbjct: 1013 KNEFQLFYQMQVGLSD-RAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVID 1071 Query: 482 ESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C L W++ R L LSVN+SA Q + V + + R+ I P L LE+TES Sbjct: 1072 TACAQLKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTESA 1131 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP- 598 +D AVAI+ L++ G+R +LDDFG GY+ LQ+++ LP+ LKID+ FV + Sbjct: 1132 LLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSS---LQYLRLLPLYQLKIDRSFVRDIAS 1188 Query: 599 --GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 G+ +++ II +A +LNL +IAEGVET+ Q+ L +G QG+LF+ P+PI+ FE Sbjct: 1189 SIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPIDAFEA 1248 Query: 657 SY 658 Sbjct: 1249 LL 1250 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 136/454 (29%), Positives = 226/454 (49%), Gaps = 14/454 (3%) Query: 218 GMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TA 271 G L+ + + +R H E A ++ LPN+ LL + ++Q V + TA Sbjct: 249 GTLLFFEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTA 308 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 + + + + L + LL ++L S L +A+ G +F ++ Sbjct: 309 IAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPNE 368 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHK 390 Q+VL +S+ ++ + CSIG+ + D AE L A SA + A+ Sbjct: 369 EAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKEL 428 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G+N Q+F + + RL + + A+ N F + QP+V + S +++ AE L+R Sbjct: 429 GRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWN 488 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLM 509 P I E GL++ +G WVL +CR AWQ+ G +P+SVNLS QL Sbjct: 489 SAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLA 548 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 ++V + +LT ++ L LE+TES D + A+L LR+ GV+++LDDFG G Sbjct: 549 RGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTG 608 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++K P+D LKID+ FV + D ++++ AII L ++LNL ++AEG+ETE Sbjct: 609 YSS---LSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETE 665 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 Q +L G QG+L ++P+P + F + + Sbjct: 666 DQFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 149/460 (32%), Positives = 244/460 (53%), Gaps = 15/460 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D G+L + +R + A P++ L N+ L L+Q +A + Sbjct: 754 RDADGVLTHYVASFTDITERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQ 813 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + + L A + LL+ + +L+ + I+A++ G +F V+ Sbjct: 814 RTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTE 873 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFT 386 V + A + ++L + R I L SIG++++ D A+ L A +A + Sbjct: 874 VGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYH 933 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G++ +QFF P+ ++ KRL + D+ A+E QF + QPQ+ TSG++V E L Sbjct: 934 AKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEAL 993 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 +R Q P P I E GL++ +G WVL E+CR L W++ GI L ++VNLSA Sbjct: 994 VRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSA 1053 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 QL P ++ + L + ++ L LE+TES + D A++A L+ LR+ G+ +++DD Sbjct: 1054 HQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDD 1113 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K LPID LK+D+ FV + P D ++ AA I LA SL L+++AEG Sbjct: 1114 FGTGYSS---LSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEG 1170 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +ETE QR LA QG+LF+ PLP E +Y+ E+ Sbjct: 1171 IETETQRRLLASHRCDFMQGYLFSAPLPAER-ALAYIREQ 1209 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 672 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 131/456 (28%), Positives = 232/456 (50%), Gaps = 16/456 (3%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAM--RFPVSDLPNKALLMEMLEQVVARKQTTA---- 271 G ++ + + + ++ E+ + ++ LPN+ L E + ++ Q + Sbjct: 697 GRVMNYLAIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMT 756 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 +M + + +D L + + LL+ + ++LK L +++ G +F +I G E Sbjct: 757 VMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDEN 816 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHK 390 A + +++ +S+ E+ +L CSIG+A++ D E L A +A + +H Sbjct: 817 G-AAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHD 875 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G+N FF + + + L + + +AL Q + QPQ+ G +V AE LLR Q Sbjct: 876 GRNGFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQ 935 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLM 509 P+ P I E G ++ +G WVL + + L W + G+ + ++VNLSA Q Sbjct: 936 HPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFR 995 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 N++ + +L ++ L LE+TE+ +DDP A+ ++ L G+++++DDFG G Sbjct: 996 QSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTG 1055 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++K + LKID+ FV + P D +++AAII +A SL +Q IAEGVET Sbjct: 1056 YSS---LSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETA 1112 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 Q +L G QG+ F++PLP E F SYL+++ Sbjct: 1113 GQLSFLRLQGCNEVQGYYFSKPLPAEQFV-SYLQKQ 1147 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 138/481 (28%), Positives = 244/481 (50%), Gaps = 14/481 (2%) Query: 187 RNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFP 246 + + + + +++ + ++E + ++ + +++ +E + Sbjct: 281 KQVFETRHQRKDGRIFPVEVSASQCLFNNEENHVAFVRDIT--IRKKYEKELEHQSNHDA 338 Query: 247 VSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ L N+ LL + ++Q + + TA+ ++ + + L +Q + +LL + E+ Sbjct: 339 LTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAER 398 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + +SP L+++ G +FA++ V P A + Q++L + P+ +LR SI Sbjct: 399 LSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSI 458 Query: 363 GVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G +++ D +E L A +A + A+ +G N QF + A K L E D+ AL+ Sbjct: 459 GASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGDLRQALQ 518 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 F + QP+V++ SGK+ E L+R PD PD I E GL++ +G WVL Sbjct: 519 LGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLR 578 Query: 482 ESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+CR AWQ +G+ + ++VNLSA Q + + V + +L + I P L LE+TES Sbjct: 579 EACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMV 638 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 ++DP +L L+ G ++LDDFG GY+ L +++ PID LKID+ F+ + D Sbjct: 639 MEDPDRIAKLLAELKQIGFALSLDDFGTGYSS---LNYLRRFPIDCLKIDRSFILDVASD 695 Query: 601 ---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 +S+ ++I +A SL + IAEGVET Q +LA QG+LF++PLP Sbjct: 696 ATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPANDLAAL 755 Query: 658 Y 658 Sbjct: 756 L 756 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 144/450 (32%), Positives = 227/450 (50%), Gaps = 13/450 (2%) Query: 218 GMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TA 271 G+L R Q + + A ++ LPN++ M ++ Q A Sbjct: 637 GVLERIRGTVQDVTSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHILA 696 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 ++ + + + L + LL + ++L L A++ G +F + V Sbjct: 697 VLFLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLPRVTRA 756 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHK 390 A + +++L ++ + I+ +L P SIG+++F D + L A +A + A+ Sbjct: 757 EDAAAVARKMLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEV 816 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G+N QFF P+ A +RL E+ + A+E ++ + QPQV TS + E L+R Q Sbjct: 817 GRNNFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQ 876 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMH 510 PD P I E GL+V +G WVL E+CR W G+ L + VN+SALQ Sbjct: 877 HPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRR 936 Query: 511 PNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGY 570 + V ++++L P + LE+TES +D A LR L N G+ +ALDDFG GY Sbjct: 937 ADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGY 996 Query: 571 AGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEA 627 + L ++K LPI LKID+ FV+ LPG D+++ AA + LA+ L L+++AEGVET A Sbjct: 997 SS---LAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVA 1053 Query: 628 QRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 QRD+L G QG+L++RPL + FE Sbjct: 1054 QRDFLVARGCHTLQGYLYSRPLDVAAFEAW 1083 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 134/467 (28%), Positives = 229/467 (49%), Gaps = 16/467 (3%) Query: 206 LALPRLHQDDEIGMLVRSYNLNQQLLQRHYE--EQNENAMRFPVSDLPNKALLMEMLEQV 263 L++ + + D G + + + R A ++ LPN+ LL + L Q Sbjct: 406 LSITAITEGD--GGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQA 463 Query: 264 VARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 + + + A++ + + + L + LL + ++ + +A+ G Sbjct: 464 ILKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGD 523 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYS 378 +F ++ ++ A T+ +++L ++E + +L SIG+A++ GD L Sbjct: 524 EFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLR 583 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A +A + A+ G+N QF+ + L E + AL+ ++ ++ QP+V G Sbjct: 584 NADAAMYRAKADGRNGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADG 643 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-ML 497 + E LLR Q PD P + E GL+V +G WVL E+CR L AW + G+ + Sbjct: 644 CIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPV 703 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 P++VNLS Q H ++VA + E L +R+ L LE+TE+ + D +A L LR Sbjct: 704 PVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAM 763 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSL 614 GV +A+DDFG GY+ L +++ ++ LKID+ FV + D + A+I LA +L Sbjct: 764 GVTLAIDDFGTGYSS---LAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNL 820 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 L + AEGVET AQ+ +LA+ G QGFLF +P P E F + ++ Sbjct: 821 GLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRLADD 867 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 148/455 (32%), Positives = 231/455 (50%), Gaps = 22/455 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAM--RFPVSDLPNKALLMEMLEQVVARKQT----TA 271 G + + + +R E+ NA+ ++ LPN+ LL++ L+Q + A Sbjct: 371 GRVSHYIGTHNDITERKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGA 430 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV--- 328 L+ I + + L + LL + +L + +A++ G +F V+ + Sbjct: 431 LLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTN 490 Query: 329 --QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAF 385 + T+ +++L +++ + + SIG +F G L + L +A + + Sbjct: 491 DKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMY 550 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N ++FFDP A + R E D+L AL QF + Q Q M +L AEV Sbjct: 551 KAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQ--MVGERLTGAEV 608 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPLSVNL 503 LLR Q P P I E GL++ +GHWVLE +C LA W + L L+VN+ Sbjct: 609 LLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNV 668 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 SA Q + V +L +L + P L LE+TES +++ + + L++ GV +L Sbjct: 669 SAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSL 728 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++K LP+D LKID+ FV + D+S+ I+ LA SL L +IA Sbjct: 729 DDFGTGYSS---LSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIA 785 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 EGVETEAQRD+LA +G QG+ F+RPLPIE FE Sbjct: 786 EGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFE 820 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 128/457 (28%), Positives = 250/457 (54%), Gaps = 14/457 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT-- 270 DE G + + + + + R E + A ++DLPN+ + ++ L + + + + Sbjct: 254 DEEGNVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQS 313 Query: 271 --ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++ + + +D ++LL+ ++L++ L P ++A++ G +F ++ N + Sbjct: 314 SLAVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQL 373 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTA 387 + A L +Q++ + ++ CSIG+A++ D E L RA +A +T Sbjct: 374 LDRNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTV 433 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + +GKN FFDP + +R+ E+++ A+E QF I+ QP++++ + + E L+ Sbjct: 434 KSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALV 493 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQ 507 R P+ P+ I E G+++ +G W+L+++C+ W ++G L +SVNLSA Q Sbjct: 494 RWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQ 553 Query: 508 LMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFG 567 + ++V + ++L ++ P L LE+TES + A A+L+ +R+ G+++++DDFG Sbjct: 554 IYQKDLVEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFG 612 Query: 568 MGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVE 624 GY+ ++KSLP+D +KID F+ + + +++ AI+ +AQSLN+ +IAEG+E Sbjct: 613 TGYSSF---SYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIE 669 Query: 625 TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 Q L + G QG+LF++PLP + F++ +E Sbjct: 670 LHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLLRQE 706 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 143/474 (30%), Positives = 238/474 (50%), Gaps = 19/474 (4%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALL 256 + ++ R + + + +++++ E+ + A ++DLPN++ L Sbjct: 928 GSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKAA--EEKISHLAHFDTLTDLPNRSNL 985 Query: 257 MEMLEQVVARKQT------TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 L+Q +A + A+M + + ++ L + LLL + +L+S + Sbjct: 986 QGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDS 1045 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 ++A++ G +F V+ G + A + ++L +S IE L SIG+A+F D Sbjct: 1046 DVVARLGGDEFVVVLTG-ADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPAD 1104 Query: 371 L-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 + E L A +A + A+ G+N +QFF EAA R E D+ AL+ QF + Sbjct: 1105 GESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQFVLHY 1164 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QPQV+ ++ + E LLR Q P P + E GL+V +G WVLE +C + A Sbjct: 1165 QPQVDAQ-RRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKA 1223 Query: 490 WQ--ERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 W R L ++VN+SA Q P+ V + + + P L LE+TES +D+ Sbjct: 1224 WSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADT 1283 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMI 604 + + ++ GV ++DDFG GY+ L ++ LP+D LKID+ FV LP D+ + Sbjct: 1284 IDKMNAIKLLGVTFSMDDFGTGYSS---LSYLTRLPLDQLKIDRAFVCRLPENRSDAVIA 1340 Query: 605 AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 I+ + +SL L+++AEGVETEAQR +L G QGFLF+RPL ++ FE+ Sbjct: 1341 QTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFL 1394 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 149/456 (32%), Positives = 238/456 (52%), Gaps = 14/456 (3%) Query: 214 DDEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT- 270 D G+L L + L+ + A P++ LPN+ LL + L+ +A Sbjct: 399 RDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLR 458 Query: 271 ---ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+M + + + L A + LL+ + +L++ L +A++ G +F V+ N Sbjct: 459 CRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMGGDEFLVVLNN 518 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + P A T+ ++++ + + +E +L S+GVA++ D A+ L A A + Sbjct: 519 LSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYR 578 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G+N Q F+P + +RL E+ + AL + ++ QP ++ G+LV+ E L Sbjct: 579 AKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEAL 638 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSA 505 LR + PD P I E GL+V +G WVL +C W E G L + VN+SA Sbjct: 639 LRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISA 698 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q A + +L + PG L LE+TES +DD A+A L LR GV +A+DD Sbjct: 699 RQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDD 758 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K PID LKID++FV G+ D+++++AI+ L SL L+++AEG Sbjct: 759 FGTGYSS---LAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEG 815 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 VET A D L + G +AQGF F+ PLP E F ++Y Sbjct: 816 VETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVKAY 851 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 148/487 (30%), Positives = 238/487 (48%), Gaps = 18/487 (3%) Query: 187 RNIARELNAI-PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAM 243 R ++RE+ I E G +L+ + +E G + + + + R E+ A Sbjct: 330 RAVSREVERILDDGEPSGLRLSAFPV--FNEQGKATKFIKVVEDITDRKRAEEKIRRLAY 387 Query: 244 RFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTL 299 ++ LPN+ L+M+ L Q + + AL+ + + +D + LL + Sbjct: 388 YDSLTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEV 447 Query: 300 VEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPH 359 +L LA++ G +F +IA GV+ A L ++L ++E ++R L Sbjct: 448 AARLSGCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIA 507 Query: 360 CSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILN 418 SIG+ +F D E L RA A + A+ +G N +FF + A +R E D+ Sbjct: 508 TSIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMRQ 567 Query: 419 ALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHW 478 AL N +F + QPQV + K+V E L+R P LP I E G + +G W Sbjct: 568 ALTNGEFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRW 627 Query: 479 VLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 VLEE+CR A WQ G+ L + VNL A Q H +V + ++L + + L +E+TE Sbjct: 628 VLEEACRQGAQWQHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTE 687 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 + + D AV+ L L+ GVR+A+DDFG GY+ ++K P+D +KID+ F+ + Sbjct: 688 TMLM-DSETAVSTLGQLKALGVRLAIDDFGTGYSSFN---YLKHFPLDRIKIDQSFIRDI 743 Query: 598 P---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 G+ ++I AI+ +A+SL +++AEGVETE Q +L QGF F+RPL + Sbjct: 744 GQSRGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLPDDV 803 Query: 655 EESYLEE 661 E Sbjct: 804 SRLIRES 810 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 132/461 (28%), Positives = 215/461 (46%), Gaps = 15/461 (3%) Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVV 264 A D + G+ + + +R + A ++ LPN+ L+ L Q++ Sbjct: 361 ARINRVDDPQSGLPAHYVWILADITERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLL 420 Query: 265 ARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 + A+M I + + L + +L + +L ++L +A++ G + Sbjct: 421 PEARRHGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFVARLGGDE 480 Query: 321 FAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSR 379 F +I + P A + ++++ +S + E +L SIG+++F D + + Sbjct: 481 FVIILPSISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKN 540 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A +A + A+ G+N QFF A +RL E + +A+ ++ ++ QPQ Sbjct: 541 ADTAMYHAKAAGRNNYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTT 600 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLP 498 E LLR P P I E G++V +G WVL +C +A W G+ L Sbjct: 601 PTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLR 660 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 ++VN+SA QL + + LT + L LE+TES +++P A+ IL L G Sbjct: 661 IAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMG 720 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLN 615 V +A+DDFG GY+ L ++K PID LKID+ FV + D ++ I LA SL Sbjct: 721 VTLAIDDFGTGYSS---LAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLG 777 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP-IEIFE 655 L +IAEGVETE Q + L G QGFLF++PL F Sbjct: 778 LNVIAEGVETEDQHELLRANGCDEVQGFLFSKPLTGAAAFA 818 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 141/462 (30%), Positives = 240/462 (51%), Gaps = 21/462 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----K 267 D G +V + EE A P++ LPN+ LL + L+Q +A Sbjct: 551 KDAGGNVVNYVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSG 610 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 ++ A++ I + ++ L ++LL + +L S + +A+I G +F V+ Sbjct: 611 KSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLED 670 Query: 328 VQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAI 381 + + ++G ++L ++ + SIG +F + + ++L +A Sbjct: 671 LSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQAD 730 Query: 382 SAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLV 441 A + A+ G+N ++FFDP+ ++ RL E ++ A+E QF ++ Q QV+ + + + Sbjct: 731 IAMYQAKKAGRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQVD-ETHRPL 789 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPL 499 AE LLR P+ P I E GL+V +G WVLE +C L AW++ + L L Sbjct: 790 GAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVL 849 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 S+N+SA Q P+ V + + Y I P L LE+TES +++ + + L+ GV Sbjct: 850 SINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGV 909 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNL 616 +LDDFG GY+ LQ++K LP+D LKID+ F++ + DS ++++ II +AQS+ + Sbjct: 910 GFSLDDFGTGYSS---LQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQM 966 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 +IAEGVETE QR L + G QG+LF++P+P+E FE+ Sbjct: 967 GVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLL 1008 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 135/524 (25%), Positives = 247/524 (47%), Gaps = 41/524 (7%) Query: 173 AISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQD------------------ 214 W N + P+ +I + ++ I + +LH+ Sbjct: 236 LTGWQQNEALGRPIADILKVVDEITREPRGSTVERPNQLHRSTKAPSNSILVRRDGSELP 295 Query: 215 ---------DEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQV 263 D G + + + + + + A ++DLPN+ +L + L Q Sbjct: 296 IDESRAPILDRQGQIAGTVTVLHDVSVTRAMELKMAHLAQHDFLTDLPNRRVLDDRLRQA 355 Query: 264 VARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 ++ + A++ + + + L + L ++ E+L + + +A+ G Sbjct: 356 ISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASDTVARQGGD 415 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYS 378 +F ++ V A + +++L+ ++ I R +L+ SIG++ D AE L Sbjct: 416 EFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPNDADDAETLIK 475 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A A + A+ KG+N QFF E +R + ES + ALE +F + QP++ + +G Sbjct: 476 HADIAMYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPKMNLETG 535 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-ML 497 + E L+R + P+ P I E CGLM +G WVL+E+CR + W G+ + Sbjct: 536 HITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGLNPV 595 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 P++VN+SA++ + ++ L + P L LE+TE+ + + +A+L L++A Sbjct: 596 PVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSA 655 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSL 614 GV++A+DDFG GY+ L ++ LP+D LKID+ FV + ++++++AII + +SL Sbjct: 656 GVKLAIDDFGTGYSS---LSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSL 712 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 NL +IAEGVET+ Q L QG+ F+RP+ + E Sbjct: 713 NLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELL 756 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 126/460 (27%), Positives = 235/460 (51%), Gaps = 14/460 (3%) Query: 214 DDEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 ++E G ++ + + ++ NE R P++ LPN+ L+ E+L+ + + Sbjct: 523 NNEEGKVINYVGVFADISEIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQ 582 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 AL+ + + + L + LL + +++++ + +A++ G +F V+ + Sbjct: 583 NEIALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDV 642 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 ++E A + +++++ + I+ +L S+G++++ D + L A A + Sbjct: 643 LREREDAAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQ 702 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 ++KGKN F+ + A +R T E+ + AL QF ++ Q QV + +G+++ AE L Sbjct: 703 VKNKGKNNHCFYSADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESL 762 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSA 505 +R P+ P I E GL++ +G WVL +S + W ++G + +SVN+S Sbjct: 763 IRWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSG 822 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 +Q+ N + +L + L LE+TES + + + + +++ GVR+A+DD Sbjct: 823 VQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDD 882 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L H+K LP+D +KID+ FV LP D+++ AI +AQSL +IAEG Sbjct: 883 FGTGYSS---LSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEG 939 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VET Q +L K G QG+L++RP+ F E+ Sbjct: 940 VETRQQASFLKKIGCQQGQGYLYSRPVTASEFTALLRAEQ 979 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 130/458 (28%), Positives = 231/458 (50%), Gaps = 16/458 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQTT- 270 DE G + + + +R E++ A ++ LPN+ + + R + + Sbjct: 591 KDENGDTQQIIYIFSDITERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSK 650 Query: 271 ---ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+M I + + ++LL + E+ K L ++++ G +F V+ + Sbjct: 651 TQMAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEFTVLLSN 710 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + + +++L E + ++ SIG+ +F + + + L A SA + Sbjct: 711 TRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYR 770 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ KG+N QF+ + + AQ+RL E D+ ALE +F + QPQ + +G+++ E L Sbjct: 771 AKEKGRNCFQFYTKEMNQYAQERLELELDLRKALERDEFVLHYQPQFD-PNGRIIGCEAL 829 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSA 505 +R Q PD P I+ E GL+V +G WV++ +C W +G L +SVNLS Sbjct: 830 IRWQHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSG 889 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q +H +++ + +T I P L LE+TES + + + L + + G+ +++DD Sbjct: 890 RQFLHHDLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDD 949 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ + L K P++ LKID+ FV GLP D +++ +II++A +LNL +IAEG Sbjct: 950 FGTGYSSMSCL---KRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEG 1006 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 VET Q ++L + QG+ F+RP+ E+ YL+ Sbjct: 1007 VETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQ-YLQ 1043 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 134/445 (30%), Positives = 228/445 (51%), Gaps = 14/445 (3%) Query: 224 YNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITC 277 Y L+ + +R E+ A ++ L N+AL + LEQ + + A++++ Sbjct: 254 YGLDIDISERKINEEQLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDL 313 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + L + + LL + ++L V+ +A++ G +F ++ V EP L Sbjct: 314 DRFKIINDSLGHSFGDRLLSAVAQRLDRVVRDTDTVARLGGDEFVLLLAEVTEPDDVGLL 373 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQ 396 ++L ++ IE ++ S+G++++ D L A A + A+ +G Sbjct: 374 ASRILHELAVPHRIEGREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQEGGGVFS 433 Query: 397 FFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSW 456 F+ P+ + A + + ES + ALE +F ++ QP+V++ SG++ E L+R P Sbjct: 434 FYAPEMNQRAMETMEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGV 493 Query: 457 DLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVA 515 P I E GL+V +G WVL+E+CR + AWQ G+ + ++VNLSA Q ++ Sbjct: 494 VAPADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPG 553 Query: 516 DMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQ 575 + E+L + P L LE+TES + D VA++ L GVR++LDDFG GY+ Sbjct: 554 LVREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAH 613 Query: 576 LQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWL 632 L H PI+ LKID+ F++ + P +++ +II +A + L+ IAEGVETEAQ +L Sbjct: 614 LSH---FPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYL 670 Query: 633 AKAGVGIAQGFLFARPLPIEIFEES 657 K G QG+L +RPLP + Sbjct: 671 RKQGCDEIQGYLLSRPLPASEYAAL 695 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 151/463 (32%), Positives = 232/463 (50%), Gaps = 18/463 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQTTA 271 DE G LV + +R E+ + A ++ LPN+ L + L + + + Sbjct: 948 RDEEGDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNG 1007 Query: 272 ----LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 LM + + + L A + +L + +L + +S +A++ G +F ++ Sbjct: 1008 QWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPS 1067 Query: 328 VQEPW----HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAIS 382 + AI + + +L ++ +E + SIGVA+ D L A + Sbjct: 1068 QGDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADT 1127 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVS 442 A + A+ GKN QF+ + A +RL ESD+ ALE +F + QPQ +L Sbjct: 1128 AMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTG 1187 Query: 443 AEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSV 501 AE LLR Q P P I +E GL+ VG W+L E+C+ L +W + + +P +SV Sbjct: 1188 AEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSV 1247 Query: 502 NLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRV 561 NLSA Q + + +L I P L LE+TES + D A+ IL L+ G+ + Sbjct: 1248 NLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAI 1307 Query: 562 ALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQM 618 A+DDFG GY+ L ++K PIDVLKID+ FV+GLP D+ + AII +A SLNL + Sbjct: 1308 AVDDFGTGYSS---LNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMV 1364 Query: 619 IAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 IAEGVE++AQ D+L + G QG+LF RP+P E F Y + Sbjct: 1365 IAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYASD 1407 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 126/451 (27%), Positives = 233/451 (51%), Gaps = 13/451 (2%) Query: 213 QDDEIGMLVRSYNLNQQLLQRHYEE-QNENAMRFPVSDLPNKALLMEMLEQVVARKQTTA 271 +++E + + + +++ + ++H E+ A ++DLPN+AL ++ L ++ + Sbjct: 418 KNEEAVLAMMAVSISGAIQRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSG 477 Query: 272 ----LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 ++ + + + L + + LL + +L L +A+ G +F ++ Sbjct: 478 EKLSVLFLDLDRFKTINDTLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQ 537 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + + Q++L+ + + +E +L SIG+A++ D E L A A + Sbjct: 538 IHQVNDVAKTAQRMLSALEQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQ 597 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N QFF A +RL E + +ALE +F ++ QPQV + +GK+ E L Sbjct: 598 AKQLGRNTYQFFCSGLSNGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEAL 657 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 LR + P+ +P + E GL+V +G WVL +C WQ++G+ + ++VNLSA Sbjct: 658 LRWKHPEMGLVIPQLFMSVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSA 717 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q P++ + +L + P L LE+TE+ I D +L+ L++ G+++++DD Sbjct: 718 RQFRQPDLTGMIARILDETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDD 777 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L H++ P++ LKID+ FV + D+ ++ A+I LA+ LNL ++AEG Sbjct: 778 FGTGYSS---LAHLQQFPLNTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEG 834 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 VE + Q + L AQG++F RPL + Sbjct: 835 VENDEQLNCLESLHCEEAQGYIFNRPLEADA 865 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 134/459 (29%), Positives = 228/459 (49%), Gaps = 22/459 (4%) Query: 218 GMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTA 271 G+ ++ + + +R A +++LPN+ LL++ LEQ + K++ A Sbjct: 779 GVFTHWVSVQRDITERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGA 838 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE- 330 L+ + + + ++LL + ++L + + +A++ G +F V+ + E Sbjct: 839 LLFLDLDNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQ 898 Query: 331 ----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL--TAEQLYSRAISAA 384 A + ++L +S+ + + CSIGVA+F + T ++L RA A Sbjct: 899 GCNAAQEASLVADKILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAM 958 Query: 385 FTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAE 444 + A+ G+N +FFDP KR E D+ AL + ++ QPQV+ G L+ AE Sbjct: 959 YEAKAAGRNTFRFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQ-GSLLGAE 1017 Query: 445 VLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPLSVN 502 L+R + P P I+ E GL++ +G WVL +C L AW + L LSVN Sbjct: 1018 ALVRWEHPQQGLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVN 1077 Query: 503 LSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVA 562 +SA QL + + + +L P +L LE+TES +++ + + L+ GV + Sbjct: 1078 VSARQLHQHDFIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFS 1137 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMI 619 +DDFG GY+ L ++K LP+ LKID+ FV + D+S++ II L L ++++ Sbjct: 1138 MDDFGTGYSS---LAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVV 1194 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 AEGVE+ Q+ +L K G QG+LF RP P E E + Sbjct: 1195 AEGVESWEQQQFLEKHGCLEYQGYLFGRPQPAEQLEREF 1233 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 128/452 (28%), Positives = 230/452 (50%), Gaps = 15/452 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 DE G +V ++ + ++ E+N + A ++ LPN+ LL + L Q++A Sbjct: 465 RDEHGKVVNYISIARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDK 524 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 +L+ + + + + + + LL ++ +++ + +A++ G +F V+ Sbjct: 525 HQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLRE 584 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFT 386 E A + Q++L ++ ++ + SIG++++ A+ L A A + Sbjct: 585 AGE-SAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYR 643 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G+N QFF P+ + E D+ ALE + + QPQ ++ SG L E L Sbjct: 644 AKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEAL 703 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSA 505 +R P P I E G +V +G WVL +C +A W++ G+ L ++VNLS Sbjct: 704 IRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSI 763 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 QL P++ + +L + L LE+TE + D AA L +++ GV++++DD Sbjct: 764 RQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDD 823 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG G++ L ++K +P++ LKID+ F+ + GD+++I +II L LNL++IAEG Sbjct: 824 FGTGFSS---LNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEG 880 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 VET+ Q D+L G QG+ ++RPL E F Sbjct: 881 VETQEQLDFLRIRGCDEIQGYFYSRPLLAEDF 912 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 146/459 (31%), Positives = 235/459 (51%), Gaps = 15/459 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARK---- 267 +E G + + ++ + A P++ LPN+ALL + + Q +A Sbjct: 286 RNESGGIENCIAIYAEITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREG 345 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + + L + LL + ++LK+ + +A+ G +F V+ Sbjct: 346 TRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPH 405 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 V A + +++ M + +P+ L SIG+++F D + L A A + Sbjct: 406 VDSAEQAAHVAGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYR 465 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 ++ G+NQ QFF A +RL E+D+ A+E +F + QPQ E SG ++ AE L Sbjct: 466 SKASGRNQFQFFTADMNAHALERLALENDLHRAVERGEFRLMFQPQFE-GSGSIIGAEAL 524 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 LR Q P P I E GL+V +G WVLE +C+ + AW++ G+ + +SVN+SA Sbjct: 525 LRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISA 584 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 LQ N++ + LL I+PGTL LE+TES + D A ++ L+ GVR+A+DD Sbjct: 585 LQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDD 644 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG--DS-SMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L +++S PI LKID+ FV L D+ ++ AII LA++LN+++IAEG Sbjct: 645 FGTGYSS---LSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEG 701 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 VET Q +L QG F++P+ E F E E Sbjct: 702 VETAQQASFLQAQCCDEFQGHFFSQPVSPEKFAELLRAE 740 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 143/480 (29%), Positives = 253/480 (52%), Gaps = 21/480 (4%) Query: 200 ELVGHQLALPRLHQDDEIGMLVR-------SYNLNQQLLQRHYEEQN--ENAMRFPVSDL 250 E +AL R H+D E+ + R + +L ++ +R E+ A+ ++ L Sbjct: 453 ERKAADVALARAHEDLELRVKERTKELAKANMDLLVEINERKMAEERVKHMALHDALTGL 512 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ LL E LE ++ ++ A++ I + + L + + LL+ + +L V Sbjct: 513 PNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVNDTLGHHEGDQLLVEVANRLHQV 572 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + +A++ G +F ++ N + + + + + + + SIGVA+ Sbjct: 573 IGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFKPAVKLALQDMFVTPSIGVAI 632 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D T QL A +A + A+ G+N Q+F+ ++ ++R++ E+ + AL+ QF Sbjct: 633 YPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNRSLDDSLKERISLENALNQALKLGQF 692 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QPQ+++ S +++ AE L+R P+ PD I E GL+V +G WVL ++ Sbjct: 693 ELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASS 752 Query: 486 LLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 LA W+++G L +SVNLSALQ+ + ++ +++ Y + L LE+TES + + Sbjct: 753 QLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLELTESMIMRNA 812 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 +A L + N G+++++DDFG GY+ L ++K P+D LKID+ FV+ + D+ Sbjct: 813 EETIAALDKIHNLGIQISVDDFGTGYSS---LSYLKRFPLDKLKIDRSFVQDITVDTDDA 869 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + II +A +LNLQ+IAEGVET AQ + L G QG+LFA+PLP+E E L Sbjct: 870 MICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEHLLAS 929 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 139/466 (29%), Positives = 239/466 (51%), Gaps = 17/466 (3%) Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVV 264 +L H DE ++ +++ + + +R + E+ A ++ LPN+ L M+ L+Q Sbjct: 273 SLSCAHGGDESSVI---WSICRDITERKHAEEQLYRLAHHDTLTGLPNRILFMDRLQQAK 329 Query: 265 ARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 A A++ + + + L + LL + ++ + +A+I G + Sbjct: 330 ALANRYRYQVAVLFLDLDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDE 389 Query: 321 FAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSR 379 F +I V +GQ++L ++ I+ +L SIG+++F D +QL + Sbjct: 390 FTIILVNVDTVEDVKRMGQKILKTLAAPFNIDTHELFVTASIGISLFPSDGDNLDQLVKK 449 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A A + + +G+N +QF+ PQ A KRL E+ + AL+N +F ++ QP+V++ S + Sbjct: 450 ADIAMYCVKGEGRNNVQFYSPQMDANADKRLLLETSLRKALDNREFRVYYQPKVDIVSKR 509 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLP 498 + + E L+R P P I E GL++ +G WVL +C W +GI + Sbjct: 510 ITAMEALIRWDHPILGLVSPGEFIPLAEETGLIIPIGEWVLRAACFQNCEWVRQGIPPMR 569 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 ++VNLS Q N++ + +L + L LE+TES + +P AV++L LR+ G Sbjct: 570 VAVNLSGYQFQQKNLLETIRGILDETGLTADLLELEITESVIMQNPDFAVSVLNQLRDLG 629 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLN 615 V +++DDFG+GY+ L H+K ++ LKIDK FV + +S ++ AII + SLN Sbjct: 630 VHISIDDFGIGYSS---LAHLKRFSVNTLKIDKSFVRDVEINSADAAIATAIIAMGNSLN 686 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 L++IAEGVETE Q +L+ QG+LF+ P+P E E E Sbjct: 687 LKVIAEGVETEGQLSFLSDNKCDEVQGYLFSTPMPPEKVAEFMREH 732 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 131/463 (28%), Positives = 236/463 (50%), Gaps = 18/463 (3%) Query: 208 LPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEM----LE 261 P H D G + ++ + + ++ + A ++ LPN+ LL + ++ Sbjct: 840 SPLRHTD---GRVTNYLSIKEDITEQKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQ 896 Query: 262 QVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDF 321 A++ + + ++ L + LL+ L +++K +L L++ G +F Sbjct: 897 MAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDEDTLSRFGGDEF 956 Query: 322 AVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRA 380 ++ + A + +++L +++ IE+ +L SIG+AM+ D ++LY A Sbjct: 957 ILVLPDT-DADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSA 1015 Query: 381 ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKL 440 A + A+ G+N +FF + + +RL E+ + AL +QF + QPQ+ M GK+ Sbjct: 1016 DVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQPQISMQDGKI 1075 Query: 441 VSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPL 499 V AE LLR P+ P I E GL++++G WVL + + + WQ+ G + + Sbjct: 1076 VGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTV 1135 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 ++NLSA+Q + ++++L + P + LE+TES +D+P A+ ++ L G+ Sbjct: 1136 AINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGI 1195 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNL 616 R+++DDFG GY+ L +++ ++ LKID+ FV L D +++ AII LA S+ Sbjct: 1196 RMSIDDFGTGYSS---LSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMGF 1252 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 Q IAEGVET Q +L G QG+ F+RPL + +FE L Sbjct: 1253 QTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAFVL 1295 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 144/457 (31%), Positives = 230/457 (50%), Gaps = 15/457 (3%) Query: 211 LHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQ 268 + + D G + Q E A ++ LPN++LL E + +AR Sbjct: 941 ISRVDGDGAPTHYIGTFIDITQHKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAH 1000 Query: 269 TT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI 324 ALM + + ++ L + LL+ + E+L+ + ++++ G +F V+ Sbjct: 1001 RGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVV 1060 Query: 325 ANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISA 383 + A + ++L +M+ IE+ +L S G+AM+ D + E L A +A Sbjct: 1061 LPST-DADGAAHVAAKLLEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTA 1119 Query: 384 AFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSA 443 + A+ G+N FF + E + + L E+D+ ALEN + + QPQ + +LV A Sbjct: 1120 MYRAKQSGRNAYCFFTAEMQERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGA 1179 Query: 444 EVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVN 502 E LLR Q P P I E CGL++ +G WVL + L WQ+ G+ + ++VN Sbjct: 1180 EALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVN 1239 Query: 503 LSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVA 562 LSA+Q ++ + +L + L LE+TES +D+P AA+A + LR GVR++ Sbjct: 1240 LSAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMS 1299 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMI 619 +DDFG GY+ + ++K + LKID+ FV L P D +++ A I LA+ L LQ I Sbjct: 1300 IDDFGTGYSSM---SYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTI 1356 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 AEGVE+EAQ +L G AQG+LF+RPL F Sbjct: 1357 AEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAA 1393 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 142/460 (30%), Positives = 232/460 (50%), Gaps = 15/460 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 DE G + + + Q E+ A P++ LPN+ L + LE + R + Sbjct: 425 RDEQGRPRQYVFVFNDISQLKDSQEQLERLAHYDPLTGLPNRHLALARLEHALERARRHA 484 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+M I + + L + LL+ + ++L L LA++ G +F V+ Sbjct: 485 FPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEFLVVIEE 544 Query: 328 VQEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 ++ +L ++ + + SIG++++ GD +A +L A +A + Sbjct: 545 AP-VQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMY 603 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ +G N +F+ AA +RL+ E+ + AL +F + QP VE+ SG+++ AEV Sbjct: 604 LAKAQGSNAYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEV 663 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSA 505 L+R Q P + P I E GL+V +G WVL E+CR AW + G+ L L+VNLS Sbjct: 664 LVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSP 723 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q + ++V + + L + P L LE+TE ++ AV L L+ GV +A+DD Sbjct: 724 RQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDD 783 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K P+D LKID+ FV LP D+ ++ II + ++L L+ +AEG Sbjct: 784 FGTGYSS---LAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEG 840 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VET Q +L + G QG+LF+ PLP E FE + + Sbjct: 841 VETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERWLRDGR 880 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 130/452 (28%), Positives = 221/452 (48%), Gaps = 14/452 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT- 270 D G + + + + A ++DLPN+ LL L V R Q + Sbjct: 361 RDHNGKVSHYVGVFSDISRMKETEARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSG 420 Query: 271 ---ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + ++ L + LL+ + +L+S + LA++ G +F ++ + Sbjct: 421 EMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVILLDR 480 Query: 328 VQEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAF 385 ++ Q+++ ++++ + ++ SIG++++ D A QL S A +A + Sbjct: 481 IRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNADAALY 540 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N +F+ AA +RL E+ + LE +F + QP V + G++V AE Sbjct: 541 QAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEA 600 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSA 505 L+R P P I E GL+V +G WVLE +CR W + G L ++VNLS Sbjct: 601 LVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLST 660 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q ++ A + ++L R L LE+TES ++D AVA L L+ GVR+++DD Sbjct: 661 RQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDD 720 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K +D LKID+ FV + D + ++A ++ +A + L +IAEG Sbjct: 721 FGTGYSS---LAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEG 777 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 VET Q +L G QG+L RP F Sbjct: 778 VETAEQLAFLRSLGCEAYQGYLVGRPQAAADF 809 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 130/451 (28%), Positives = 222/451 (49%), Gaps = 14/451 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D G L + + QR E+ A ++ LPN+ LL E +E V R Q Sbjct: 591 DNHGSLQNYVVVLTDISQRKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQ 650 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 ++ I + + L ++LL + +L L +A+ G +F V+ Sbjct: 651 CVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDF 710 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTA 387 E + + + ++++ +++ + + +L SIG++++ D L A A + A Sbjct: 711 IEQQYLVNVARKIMHALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRA 770 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + GKN F+ + RLT E+ + ALE ++F++ Q ++++ ++ AE L+ Sbjct: 771 KDDGKNTFHFYSADGNANSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALI 830 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE-RGIMLPLSVNLSAL 506 R + P I E G+++ +G WVL+++CR WQE G + + VN+SA Sbjct: 831 RWHSAELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISAR 890 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q ++ + L + P L LE+TES + + A +L+ RN G V +DDF Sbjct: 891 QFREDSLYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDF 950 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K PID LKID+ FV +P D ++ AII +A SL + ++AEGV Sbjct: 951 GTGYSS---LGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGV 1007 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 ET+AQ ++L G QG++F+RPL +E F Sbjct: 1008 ETQAQLEFLRGQGCDQLQGYIFSRPLVVEDF 1038 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 134/451 (29%), Positives = 235/451 (52%), Gaps = 15/451 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D G L L +R E+ A P++ LPN+ LL ++ Q Sbjct: 589 RDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRRH 648 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 ALM + + ++ L + LL ++L + + + ++++ G +F ++ G Sbjct: 649 EPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVLPG 708 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + A L +++L I + + IER ++ SIG+AM+ D T + L+ A +A + Sbjct: 709 T-DTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYR 767 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N FF + + + L ++ + ALE +QF++ QPQ+ + + ++V E L Sbjct: 768 AKQSGRNDYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEAL 827 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 +R P PD I E G ++ +G WVL+ + R L WQ+ G+ + +SVNLSA Sbjct: 828 IRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSA 887 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 +Q HP + ++ +L + P L LE+TE +++P AA+ ++ LR G+R+++DD Sbjct: 888 VQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDD 947 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K + LKID+ FV+ LP D+ ++++A+I LA SL + +AEG Sbjct: 948 FGTGYSS---LTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEG 1004 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 VET+ Q ++L G QG+ +RPL + Sbjct: 1005 VETKEQLEFLRSRGCTEIQGYYLSRPLQADA 1035 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 665 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 126/472 (26%), Positives = 228/472 (48%), Gaps = 17/472 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLP 251 N EL ++ + +E + + + +R E+ + A ++ LP Sbjct: 222 NRKKNGELYWASASISPITNGNE--QITHFIAFQEDITERKQAEETIKQMAYYDTLTGLP 279 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L E++ +A+ A++ + + + L + LL +LK Sbjct: 280 NRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECC 339 Query: 308 S-PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 R +A+ G +F ++ + + A+ + Q+++ ++ + I+L IG+++ Sbjct: 340 RRDRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISI 399 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D E L A A + A+ +G+++ + E A +RLT E+ + AL+ +F Sbjct: 400 FPNDGRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEF 459 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 +++ QP+V + +G++V E L+R Q P+ LP+ I E GL++ +G WVL +C Sbjct: 460 SLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACA 519 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 WQ + ++VN S Q P + + ++L + P L LE+TE+ + + Sbjct: 520 QNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNV 579 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---S 601 V L L N G+ +++DDFG GY+ L ++K LPI LKID+ FV + + + Sbjct: 580 EKTVQTLNRLSNLGIHISIDDFGTGYSS---LSYIKKLPIQTLKIDRSFVHDINTNADDA 636 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 ++ A+I +AQSL L +IAEGVET Q L QG+LF++PLP+ Sbjct: 637 AIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAE 688 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 144/462 (31%), Positives = 236/462 (51%), Gaps = 23/462 (4%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 DE G L+ + R E+ A P++ LPN+ LL++ L+ +A Sbjct: 683 DEHGELMGLRGTGMNITDRKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHALASSTRSGR 742 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ I + + L ++LL + +L S + +A++ G +F V+ + Sbjct: 743 EGALLFIDLDNFKTLNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFVVMLEEL 802 Query: 329 QE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAIS 382 E ++G+++L +++ + + R SIG +F + E+L +A Sbjct: 803 SEQTLEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEELLKQADI 862 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV-EMTSGKLV 441 A + A+ G+N ++FFDPQ E R E ++ ALEN QF ++ Q Q+ ++ + Sbjct: 863 AMYQAKKAGRNTLRFFDPQMQETVIARALLERELSKALENDQFQLYYQIQMTDL--NEPF 920 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPL 499 AE L+R P+ P+ I E GL++ +G WVL+ +C + W++ L L Sbjct: 921 GAEALIRWIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVL 980 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 +VN+SA + V + +L R+ I P L LE+TES ++ + + L+ GV Sbjct: 981 AVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGV 1040 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNL 616 + A+DDFG GY+ LQ++K LP+D LKID+ FV + DS +++ I+ +A SLNL Sbjct: 1041 QFAMDDFGTGYSS---LQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNL 1097 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 +IAEGVETE QR L ++G QG+LF +P PI FEES Sbjct: 1098 DVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPIRQFEESL 1139 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 139/454 (30%), Positives = 234/454 (51%), Gaps = 14/454 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVAR----KQ 268 D G + + + +RH EQ E A ++ LPN+ALL + +E+ + +Q Sbjct: 122 DTSGKPLYLIGMFVDITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQ 181 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ I + + L + LL + + S++ +A+ G +F V+ + + Sbjct: 182 RVALLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNL 241 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAE-QLYSRAISAAFTA 387 + + A + Q++L + I+ +L SIG+++F D L + A + A Sbjct: 242 ESAFDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHA 301 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G+N +FF P+ A++R + E + NAL+ + + QP V + GK EVLL Sbjct: 302 KKNGRNNCEFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLL 361 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSAL 506 R Q P P I E G+++ +G W++ +SC + AWQE+G +P L++NLSA+ Sbjct: 362 RWQHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAI 421 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q ++ +++ +L + L LE+TES I+D + LR L G+ +++DDF Sbjct: 422 QFRQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDF 481 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L +K I+ LKID+ FV + P D+++I AI+++A +L LQ+IAEGV Sbjct: 482 GTGYSN---LSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGV 538 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 E E Q +LA G QGF F++PLP E+ Sbjct: 539 ENEQQLAYLALHGCTRFQGFYFSKPLPAIEIEKK 572 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 139/480 (28%), Positives = 240/480 (50%), Gaps = 17/480 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ-RHYEEQNENAMR-FPVSDLP 251 N E+ LA+ + D G ++ L Q R E + E+ P++DLP Sbjct: 868 NRRKNGEIYPTWLAVSAVRND--QGKATHYVGISSDLSQLRQTEAEREHLAHYDPLTDLP 925 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL L +A+ + ++ + + ++ L + LL+TL E+L + Sbjct: 926 NRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHM 985 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIER-IQLRPHCSIGVAM 366 +LA++ G +F ++ + EP + + + +L +++ + ++ SIG+++ Sbjct: 986 RSEDLLARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISI 1045 Query: 367 FYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D AEQL A +A A+ G+N F+ A+ + L E+ + +A+ +Q Sbjct: 1046 FPNDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAITANQL 1105 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QPQV++ +G ++ AE L+R Q P+ P I E GL+ +G WVL+E+C Sbjct: 1106 RVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCL 1165 Query: 486 LLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 W + G+ L L+VNLS Q + N+ + ++L L LE+TES + Sbjct: 1166 QGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQG 1225 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDS 601 + +L LR +R+A+DDFG GY+ L ++K P+D+LKIDK FV+ +P D Sbjct: 1226 EDVIKMLHLLRAQDIRLAIDDFGTGYSS---LSYLKRFPLDILKIDKSFVDDIPFHQDDM 1282 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + A II + L +++AEGVET Q ++L G + QG+L + P+P E FE+ E Sbjct: 1283 EIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLKEN 1342 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 129/433 (29%), Positives = 217/433 (50%), Gaps = 12/433 (2%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVL 287 +R+ E+ A P++ LPN+ LL + + Q +A Q A++ + + + L Sbjct: 200 KRYEEQLAYQATHDPLTALPNRNLLADRISQALAWAQRHRRWIAVLFVDLDFFKFVNDSL 259 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + + LL + E+L + LA G F V+ ++ A + +S Sbjct: 260 GHGKGDQLLKMVAERLSERVRQVDTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAISL 319 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 ++ +L CSIG+ ++ D A+ L A A + A+ +G+N +++ + E Sbjct: 320 PFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNERV 379 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 R++ E + ALEN +F +W QPQ ++ +G+L E L+R + + P I Sbjct: 380 ASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLA 439 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+V +G WV+ +C WQ+ G+ L ++VNLS Q + + +L Sbjct: 440 EETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVLRETG 499 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + P L LE+ ES + D +A A+L L+ GV++++DDFG GY+ L ++K P Sbjct: 500 LDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSS---LSYLKRFPFA 556 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID FV + PG +++ +II +A +LNL ++AEGVETE Q ++L G QG Sbjct: 557 KLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQG 616 Query: 643 FLFARPLPIEIFE 655 + +RPLP FE Sbjct: 617 YYLSRPLPAAEFE 629 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 136/474 (28%), Positives = 239/474 (50%), Gaps = 15/474 (3%) Query: 199 KELVGHQLALPRLHQDDEIGMLVRSYNLN---QQLLQRHYEEQNENAMRFPVSDLPNKAL 255 K L L L + I +VR + QQ L + + + A ++ LPN+ L Sbjct: 341 KFLAEVTLTPIMLGKRHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALTGLPNRTL 400 Query: 256 LMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM 311 + LE + + AL I + + L + +L+ + ++LK+ + Sbjct: 401 FSDRLEHGLKLAERHLGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLKAKIRQED 460 Query: 312 ILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD- 370 LA++ G +F +I ++ L Q++ ++++ + IE L CSIG++ + D Sbjct: 461 TLARLGGDEFTIIMENFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGISFYPQDT 520 Query: 371 LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQ 430 A L A +A + A+ +G+N QF+ + A +R+ E+ + A++N +F ++ Q Sbjct: 521 QNANDLVKYADAAMYKAKEEGRNNFQFYSTEMTTLAYERVVMEASLRQAIKNEEFILYYQ 580 Query: 431 PQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW 490 PQV + ++ E L+R + P LPD I E GL++ + WV+ + + + W Sbjct: 581 PQVNAQTSRMTGMEALIRWEHPHLGMILPDKFIPLAEESGLILEIDRWVMRTAMKQVREW 640 Query: 491 QERGIMLPL-SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVA 549 RG+ + S+NLS QL N + + E L +P L EVTE + + P AVA Sbjct: 641 YARGLDPGVLSLNLSMRQLKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQMMKRPDDAVA 700 Query: 550 ILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAA 606 L +++ G+ +A+DDFG GY+ L ++K LP+ LKID+ F+ G+P D ++++ A Sbjct: 701 SLGEIKSMGISIAIDDFGTGYSS---LGYLKRLPVSRLKIDQSFIHGIPEDRENAAIVKA 757 Query: 607 IIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 I LA+SL+L +IAEGVE E Q+++L G QG+ + RP+ + E+ + Sbjct: 758 TIALAKSLSLSIIAEGVENEEQKEFLLFNGCISMQGYYYGRPMTADQIEKKCFD 811 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 134/452 (29%), Positives = 233/452 (51%), Gaps = 16/452 (3%) Query: 221 VRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMI 274 V + + + +R E A ++ LPN++L+ + R+ A+M Sbjct: 547 VEFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRGQLAVMF 606 Query: 275 ITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA 334 + ++ L + LL+ + +L+SVL + ++ G +F + + A Sbjct: 607 FDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVFLLPDT-DAEGA 665 Query: 335 ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKN 393 + ++L +++ L ++ +L SIG+AM+ D T + L A +A + A+ +G+N Sbjct: 666 ARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREGRN 725 Query: 394 QIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPD 453 +FF + + L + + +AL+ QF++ QPQV + G++V AE LLR P+ Sbjct: 726 GFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPE 785 Query: 454 GSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPN 512 P + E GL+ +G WVL E+ W + G+ L ++VNLSA Q +PN Sbjct: 786 FGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRNPN 845 Query: 513 MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAG 572 + + +++ + P + LE+TE+ +DDP +AV ++ L G+R+++DDFG GY+ Sbjct: 846 LPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSS 905 Query: 573 LRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQR 629 L ++K + LKID+ FV + P D ++++AII LA SL + +AEGVET Q Sbjct: 906 ---LGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQL 962 Query: 630 DWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 D+L + G QG+ F+RPLP E F YL+E Sbjct: 963 DFLRQQGCDTVQGYYFSRPLPAEAFV-GYLQE 993 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 147/461 (31%), Positives = 241/461 (52%), Gaps = 23/461 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RK 267 ++ G + +N + QR E A+ ++ LPN+ LL++ L +A + Sbjct: 589 RNDDGEPQAIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQ 648 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIA-- 325 + AL+ I + + L ++LL + +L S + +A++ G +F VI Sbjct: 649 RMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMG 708 Query: 326 ----NGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRA 380 + + T+ +++ + + ++ SIG+A+F T +L RA Sbjct: 709 DFGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRA 768 Query: 381 ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKL 440 A + A+ G+N ++FFDP A R ES++ + E ++F + Q QV+ S + Sbjct: 769 DLAMYQAKASGRNAMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVD--SRGI 826 Query: 441 VSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLP 498 + AE L+R Q P P I + E GL++ +G WVLE +C LA+W Q + L Sbjct: 827 IGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLN 886 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 LSVN+S+LQ P+ V ++ +L R P L LE+TES + D +A + L+ G Sbjct: 887 LSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARG 946 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 V ALDDFG+GY+ L ++K LP+D +KID+ FV + D++++ I++LA+S+ Sbjct: 947 VGFALDDFGIGYSS---LYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMG 1003 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 L +IAEGVET AQ+D+LA G QG+LF+RPLP+E FE Sbjct: 1004 LAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFER 1044 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 662 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 137/478 (28%), Positives = 242/478 (50%), Gaps = 15/478 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPN 252 I A GH+ +G + + QR E+ A R ++ L N Sbjct: 164 VITALHRDGHEFPAEMSISPQAVGASFIFNIFVRDISQRKADEEKLETLATRDELTGLIN 223 Query: 253 KALLMEML--EQVVARKQ--TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + +L E +A++ + A++ + + ++ L + LL +L + + Sbjct: 224 RFSYNHLLKKEVALAKRHMESLAVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIR 283 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 +A+I G +F +I G+++ L +++L ++ + I + SIG++++ Sbjct: 284 ESDTVARIGGDEFLIIMPGIKDVHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYP 343 Query: 369 GDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 D E L A +A + A+ G+N +FF P E A KR+ E + A+E +QF + Sbjct: 344 LDGDNVESLVKNADTAMYQAKDSGRNAYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKL 403 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 QPQVE++SG+++ E LLR P+ P I IE L++ +G WVL+E+C+ Sbjct: 404 LYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQN 463 Query: 488 AAWQER--GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 AWQ G L ++VN +A Q ++V + + L + + L LE+TE ++D Sbjct: 464 KAWQALHPGFPLRMAVNFAARQFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIE 523 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSS 602 + ++ L+ GV +A+DDFG G++ L ++K PID+LKIDK F++ + D++ Sbjct: 524 LNIRKMQALKELGVSIAIDDFGTGFSS---LAYLKRFPIDILKIDKSFLDEIQHGKKDAA 580 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++A I +A SL +++IAEGVET+ Q ++L G + QG+LF+RP+P E E + Sbjct: 581 IVATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPEQIAEILQK 638 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 143/483 (29%), Positives = 245/483 (50%), Gaps = 22/483 (4%) Query: 190 ARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPV 247 A + A E + + L +DD +G + R+ + + + EQ + A P+ Sbjct: 448 AVHTHYTAAGEPLYVETKAYPLERDD-LGTVRRAIEVVTDITDKKNREQEIHRLAFYDPL 506 Query: 248 SDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKL 303 + LPN+ L + LEQ Q A++ + + + ++LL E+L Sbjct: 507 TRLPNRRLFFDRLEQAFSASARSGQHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERL 566 Query: 304 KSVLSPRMILAQISGYDFAVIANGVQEPWHAI-----TLGQQVLTIMSERLPIERIQLRP 358 + + +++ G +F V+ N + HA + +++ + + ++ + Sbjct: 567 QEAVRANDTISRQGGDEFMVLLNNLSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHI 626 Query: 359 HCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 SIG+++F G T A++L+ RA +A + A+H G+NQ++FFDP+ ++ D+ Sbjct: 627 GVSIGLSLFLGHDTPADELFKRADAAMYQAKHAGRNQVRFFDPEMQAELEQASALVVDLR 686 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 A+ QF + QPQ G+++ AE LLR + P+ P I E L++ +G Sbjct: 687 QAIWQGQFQLHYQPQ-TANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGR 745 Query: 478 WVLEESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVLEE+C LAAW + L+VN+SA Q P VA++ +L P L LE+ Sbjct: 746 WVLEEACGQLAAWADLPAAGNCKLAVNVSARQFRQPEFVAEIRRILAATGADPKLLKLEL 805 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES + + V+ ++ LR+ G+ ++DDFG GY+ L +K LP++ LKID+ FV Sbjct: 806 TESIVMTELADTVSKMQELRDLGIGFSMDDFGTGYSS---LAQLKRLPLEQLKIDRAFVR 862 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 L P D +++ II + ++L++Q+IAEGVET+ Q LA+ G QG+LF+RP+P Sbjct: 863 DLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAA 922 Query: 653 IFE 655 F Sbjct: 923 QFA 925 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 148/467 (31%), Positives = 236/467 (50%), Gaps = 24/467 (5%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEMLEQVVA----RK 267 E G ++ + QR E+ A ++ LPN+ LLM+ + +A R+ Sbjct: 1034 QGEQGQPDAILAIDTDIGQRKATEREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRR 1093 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 Q AL+ I + + L Q ++LL + +L + + +A++ G +F V+ G Sbjct: 1094 QGGALLFIDLDNFKTLNDTLGHDQGDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIEG 1153 Query: 328 VQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAE--QLYSRA 380 + A T+G+++L +++ ++ R SIGVA F T+ +L +A Sbjct: 1154 LSTHPGELAMSARTVGEKILAVLATPYVLQGYHYRSTPSIGVAPFGDGRTSTVGELLKQA 1213 Query: 381 ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKL 440 A + A+ G+N ++FFDP R E+D+ AL QF + QPQ++ G + Sbjct: 1214 DLAMYQAKTAGRNTLRFFDPGMQAVVTARAELENDLRTALAREQFMLHYQPQID-RRGSV 1272 Query: 441 VSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE---RGIML 497 E L+R P P I E GL++ +G WVL +C LA WQ RG L Sbjct: 1273 TGVEALVRWPHPQRGMVSPGEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRG-HL 1331 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 ++VN+S+ Q H V D++ +T L LE+TES ++D +A + LR+ Sbjct: 1332 SMAVNVSSRQFHHEAFVEDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRSH 1391 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSL 614 GV +LDDFG GY+ L ++K +P+D LKID+ FV L P D++++ II L++SL Sbjct: 1392 GVGFSLDDFGTGYSS---LSYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSL 1448 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 L +IAEGVET QR L +AG QG+ F+RPLP E+ +++ Sbjct: 1449 GLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLPETALEDFLVQK 1495 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 124/462 (26%), Positives = 235/462 (50%), Gaps = 13/462 (2%) Query: 205 QLALPRLHQDDEI-GMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQV 263 + + + + EI G ++ ++ Q+ ++ EE +A ++DLPN+ LL + L Q Sbjct: 469 EYVISSIKEGTEIVGEVITFKDVTQR--KQMEEEIKYHAYFDSLTDLPNRVLLKDRLTQG 526 Query: 264 VA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 + + A++ + + + L + ++LL + +L + + +++ G Sbjct: 527 LTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPKSATVSRQGGD 586 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQ-LYS 378 +F + ++ + + +V+ S + ++ SIG+++F + + L Sbjct: 587 EFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPDNGDTTEILVK 646 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A +A + ++ + FF + + E+D+ ALE + I+ QPQ+ + Sbjct: 647 NADTAMYKSKEISGSSYHFFSEGMDTRTFESIKLENDLYKALEQEELVIYYQPQINGKTN 706 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML- 497 K+ E L+R + PD I E GL+V +G WVL+E+CR L W ++G L Sbjct: 707 KIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQGSPLI 766 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 +SVNLSA QL ++ A + +L + P + LE+TE+ + + + + ++ L+ Sbjct: 767 SMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGL 826 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP-GDSSMIAAIIMLAQSLNL 616 G+ +A+DDFG GY+ L ++K LPI LKIDK FV+ + D+++ II LA++LNL Sbjct: 827 GINLAIDDFGTGYSS---LGYLKKLPISTLKIDKSFVQDMTKDDAAITNTIITLAKNLNL 883 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 +IAEGVET+ Q ++L+ + QG+ F+RP+ E E+ + Sbjct: 884 DVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 136/461 (29%), Positives = 229/461 (49%), Gaps = 21/461 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKALLMEMLEQVVARK----QTTA 271 G++ L +R E+ A ++ LPN+ LL++ L +A + A Sbjct: 462 GVVTHYVGSYTDLTERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGA 521 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV--- 328 L+ I + + L ++LL + +LK+ + +A+I G +F V+ + Sbjct: 522 LLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIE 581 Query: 329 --QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAF 385 + +G+++L + + + SIG+++F + + ++ +A A + Sbjct: 582 SVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMY 641 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N+++FFD + + R E+++ AL N Q + Q QV+ + + AEV Sbjct: 642 QAKKSGRNKLRFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSA-HQTIGAEV 700 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE--RGIMLPLSVNL 503 LLR P P + E GL++ +G WVLE +C L WQ+ L L++N+ Sbjct: 701 LLRWIHPVNGIISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINV 760 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 SA Q ++ ++ R+ I P L LE+TE +++ +A +R L+ GV+ +L Sbjct: 761 SARQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSL 820 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ LQ++K LP+ LKID+ FV L D +++ II +A SLNL +IA Sbjct: 821 DDFGTGYSS---LQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIA 877 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 EGVETE QR L K QG+LF +P+PIE FE + Sbjct: 878 EGVETEIQRQILLKNQCSHFQGYLFGKPMPIEQFESLLSSD 918 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 131/475 (27%), Positives = 234/475 (49%), Gaps = 14/475 (2%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALL 256 + + ++ + R + + ++ ++ ++ + + A P++ L N+ L Sbjct: 649 KTGQPIDVEILIGRGISEGQPALIGSLLDITER--KEAEKTIEHLAFHDPLTGLANRLLF 706 Query: 257 MEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 M+ +EQ +A ALM + + + L + + L + ++L + L Sbjct: 707 MDRIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDT 766 Query: 313 LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL- 371 +++ G +F V+ +G + ++L ++ I ++ CSIG+A + D Sbjct: 767 VSRFGGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGR 826 Query: 372 TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 A L A +A + A+ G+N QF+ A +R+ ES + E + + QP Sbjct: 827 EAITLVKNADTALYRAKDLGRNNFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQP 886 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ 491 QV + SG++ E L+R + P G+ P + E GL+V +G WVL+ C L W Sbjct: 887 QVGLQSGRITGLEGLVRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWL 946 Query: 492 ERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 + G + L +N+SA QL + ++++L + P L LE+TE+ + + + A Sbjct: 947 DAGFAPMRLGINVSAHQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFET 1006 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAI 607 LR LR G+ +++DDFG G++ L ++K LP D LKID+ FV+ LP ++++ I Sbjct: 1007 LRRLRAVGITISIDDFGTGFSS---LSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHI 1063 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 I +A LNL++IAEGVE +AQ D+L +AG QGFL +RPL E E ++ Sbjct: 1064 IEMAHGLNLKVIAEGVENQAQLDFLREAGCDEIQGFLVSRPLAAEDITEILTNDE 1118 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 128/437 (29%), Positives = 233/437 (53%), Gaps = 13/437 (2%) Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLK 288 R ++ ++ A ++ LPN+ L + L +++ R A++ + + + L Sbjct: 1045 RAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLG 1104 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 ++LL +++ L ++A++ G +F VI ++ P A + ++ +++S+ Sbjct: 1105 HEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKV 1164 Query: 349 LPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 ++ SIG++++ GD L A +A F A+ +G N QF++ AA Sbjct: 1165 FAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKEQG-NSYQFYEKGMETAAV 1223 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 KRL E+++ ALE ++ A++ QPQ+ + +G++ + E L+R P+ P I E Sbjct: 1224 KRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLAE 1283 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL+ ++G W+L E+C + +W +RG ++VN+S +L ++V ++ +L + Sbjct: 1284 ETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETGL 1343 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 P L LE+TES + AA+ R LR G++ A+DDFG GY+ L ++KS P+D+ Sbjct: 1344 PPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSS---LNYLKSFPVDI 1400 Query: 587 LKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKID+ F+ + P D+++I II LA SL L+++AEGVET+AQ ++L QGF Sbjct: 1401 LKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGF 1460 Query: 644 LFARPLPIEIFEESYLE 660 + PL E++ L Sbjct: 1461 YLSEPLSAAEIEQAILS 1477 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 146/458 (31%), Positives = 240/458 (52%), Gaps = 22/458 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVV---ARKQ-TTA 271 G + + + +R E+ E A ++ LPN+ LL++ L Q + AR + A Sbjct: 572 GTVSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGA 631 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV--- 328 L+ I + + L + ++LL + +L + +A++ G +F V+ + Sbjct: 632 LLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKN 691 Query: 329 --QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 + +G+++L ++ + +I+ R SIG +F G + ++L +A A + Sbjct: 692 RQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMY 751 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 ++ +G+N ++FFDP +R E+ + NA+E++QF + Q QV + + ++ AE Sbjct: 752 KSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQV-VGT-RVTGAEA 809 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNL 503 L+R Q P P I E GL+V +G WVLE +C LA W R L ++VN+ Sbjct: 810 LVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNV 869 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S Q + V ++L ++ R +P L LE+TES +D+ + + L+ G+ AL Sbjct: 870 SVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFAL 929 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFG+GY+ L ++K LP+D LKID+ FV + D+ + I+ LA+SL L +IA Sbjct: 930 DDFGIGYSS---LSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIA 986 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 EGVETEAQRD+LA AG QG+ F RPLPIE FE Sbjct: 987 EGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEALL 1024 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 135/478 (28%), Positives = 242/478 (50%), Gaps = 17/478 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL-QRHYEEQNENAMRFP-VSDL 250 +N E + + + + D G + + + + Q++ + + E+ F ++ L Sbjct: 383 INRRHNGEERIDLVRVSPVREAD--GRITHYLAIEEDITNQKNAQARIESLAHFDVLTGL 440 Query: 251 PNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ALL E ++ + + T A+M + + ++ L + LL+ L ++L++V Sbjct: 441 PNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAV 500 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 L L+++ G +F ++ G A + Q+++ ++E I +L SIG+A+ Sbjct: 501 LRRDDTLSRLGGDEFVLLLPG-ANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAV 559 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D E L A A + A+ +G+N + F + + + L + + A+ Q Sbjct: 560 YPADGMDFETLCKNADVAMYRAKQEGRNAYRSFTQEMQAYSTRYLQVLNALRQAIAQEQL 619 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QPQ+ + SG ++ AE LLR P+ P I E GL++ +G WVL + Sbjct: 620 HVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVA 679 Query: 486 LLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 W + G+ L ++VNLSA+Q H + ++++L P L LE+TE + DP Sbjct: 680 QAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDP 739 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS--- 601 A+A++ L GVR+++DDFG GY+ L ++K LKID+ FV + D+ Sbjct: 740 QGAIAMMNSLHERGVRMSIDDFGTGYSS---LSYLKQFKAYKLKIDQSFVRDISTDAEDK 796 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 ++++AII +A++L LQ IAEGVET Q+ +L + G AQG+ +++PLP FE L Sbjct: 797 AIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADFETFIL 854 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 139/457 (30%), Positives = 237/457 (51%), Gaps = 14/457 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D G +R L + +R E N A ++DLPN+ LL L+Q + + Sbjct: 1054 DSQGHPIRLRGLIMDVTERKTSQERLNYMAHHDHLTDLPNRLLLKARLDQSIQQATRKRT 1113 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++ I + + + A + LL L ++L+ VL +A+ISG +F + + Sbjct: 1114 KLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAVLEDI 1173 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTA 387 ++ HA + +++T+ E P+E + S+G+++F D L A SA + A Sbjct: 1174 EDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSLFPDDGMDTAILLRNADSAMYRA 1233 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + +G+N F+ + AA + + E+ + AL+ ++F + QPQ++++S + V EVLL Sbjct: 1234 KEEGRNTYCFYAEEMTSAAFEYVLFENALRGALKRNEFYLVYQPQIDLSSHRWVGMEVLL 1293 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSAL 506 R P+ P I E GL+ +G WVL +C W ++GI ++VN++A Sbjct: 1294 RWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYRACCQAKTWLDQGIDFGHIAVNVAAP 1353 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q+ N V + + L + L LE+TE + + L L++ G+ +A+DDF Sbjct: 1354 QIQQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDF 1413 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K LPI+ LKIDK FV +P D+ ++ A+I L ++LNL++IAEGV Sbjct: 1414 GTGYSS---LSYLKRLPINKLKIDKSFVRDIPHDTNDMAISEAVIALGKALNLRIIAEGV 1470 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 E E Q +L + G AQG+L+++PLP E + + E Sbjct: 1471 EQEIQATFLREKGCHEAQGYLYSKPLPPEEITQLFAE 1507 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 135/451 (29%), Positives = 244/451 (54%), Gaps = 9/451 (1%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT--- 270 D + G LV++ + + ++ A P++ LPN+ L+ + L+ +A+ + Sbjct: 464 DLDRGHLVQAIIRDISERKAAEDQLVHQAYHDPLTGLPNRLLISDRLKLAIAKARRHKTQ 523 Query: 271 -ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ 329 L+++ + ++ L A + +L TL ++++ L +A+ G +F V+ ++ Sbjct: 524 AVLLLLDLDRFKNINDTLGHAVGDRILTTLAQRMQETLRDTDTVARFGGDEFLVLLEDIR 583 Query: 330 EPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTAR 388 E ++L Q++ ++S+ + I+ ++ S+G+++ D +QL A +A + A+ Sbjct: 584 ELSDVVSLAQKLSDLVSQPVLIDGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYRAK 643 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 KG+N QF+ P A +RL E+++ AL+ + ++ QPQVEM SG+++ +E LLR Sbjct: 644 EKGRNNFQFYTPDMNAHAGRRLQLENNLRKALQRQEMVVYYQPQVEMDSGRIIGSEALLR 703 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL 508 P+ P+ I E G++ +G W LE++C+ AWQ+ L ++VNLSA Q Sbjct: 704 WMHPEHGLISPNDFIPLAEETGVIEEIGAWALEQACQQTVAWQKNHPELKIAVNLSARQF 763 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 + N+V D+ ++L + + L +E+TES ++D A+ ++ L G+ +A+DDFG Sbjct: 764 RNENLVDDIEQILNKTGLAARHLEMELTESLLMEDVDVAIDLMNRLTKLGITLAIDDFGT 823 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS-MIAAIIMLAQSLNLQMIAEGVETEA 627 GY+ L H+ PID LKID+ FV + D++ + II L ++L L +IAEGVE Sbjct: 824 GYSS---LSHLNRFPIDKLKIDRSFVNSMSLDNNGIARTIITLGRTLGLSIIAEGVENNE 880 Query: 628 QRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 QR L + G AQG+ F+RP+ F E Sbjct: 881 QRQLLLQLGCPQAQGYYFSRPVHDNAFSEML 911 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 143/460 (31%), Positives = 243/460 (52%), Gaps = 15/460 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLM----EMLEQVVARK 267 D+ G + + + R E+ A P++ LPN++ L+ + ++Q+ + Sbjct: 617 RDDAGAITNYVGVFADITVRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSG 676 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 Q A+M + + + + LL +L+ V+ R +A++ G +F ++ + Sbjct: 677 QQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLVSH 736 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 TL + +L ++++ L +E +L S+G++++ D A L A A + Sbjct: 737 FASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYR 796 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ GKN QFF + A +RL E + ALE +F + QP V + +L + EVL Sbjct: 797 AKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVL 856 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSA 505 LR + P+ P I E GL+ +G WV+ ++CR LA W G+ +P L++NLSA Sbjct: 857 LRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSA 916 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q ++ + L I G L LE+TES + +P AV++L L+ GVR+++DD Sbjct: 917 RQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDD 976 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K P+D LKID+ F+EGLPGD +++ AI+ +A+ L+ ++AEG Sbjct: 977 FGTGYSS---LSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEG 1033 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VETEAQ +L G + QG+LF+RPLP ++L+++ Sbjct: 1034 VETEAQAAFLCAKGCQLLQGYLFSRPLPAAEL-PAFLQQR 1072 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 136/443 (30%), Positives = 235/443 (53%), Gaps = 13/443 (2%) Query: 228 QQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLR 281 + + +R + A P+++LPN+ LL + +++ +A + ALM + + + Sbjct: 518 RDITERKNAQDRLEFMAHHDPLTELPNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFK 577 Query: 282 DTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQV 341 L A + LL + +L+ + +A++ G +F ++ N V++ + + +++ Sbjct: 578 TVNDSLGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEFVIVLNAVRDADGVVEVAEKI 637 Query: 342 LTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDP 400 ++ + IE ++ S+G+AMF D + L +A +A + A+ G++ +FF Sbjct: 638 HKSVAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAAMYHAKESGRSTYRFFAA 697 Query: 401 QQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPD 460 + A L S + ALE +F ++ QPQV +T G +V AE L+R P+ P Sbjct: 698 RMNADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPA 757 Query: 461 GLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLEL 520 I E GL+V +G WVL ++CR A WQ G L ++VNLSALQ ++ + E Sbjct: 758 EFIPVAEDSGLIVPMGDWVLRQACRQAALWQAGGHALTMAVNLSALQFRRGDLERAVREA 817 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L + P +L LE+TES I D A + + R L GV++++DDFG GY+ + ++K Sbjct: 818 LEESGLAPHSLELELTESIMIQDHEAVMDMTRRLGALGVQLSIDDFGTGYSSM---AYLK 874 Query: 581 SLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 +D LKID+ FV + D +++ AII +A SL L++IAEGVE ++L G Sbjct: 875 RFAVDKLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGC 934 Query: 638 GIAQGFLFARPLPIEIFEESYLE 660 +AQGFL+ RP+ + FE++ L+ Sbjct: 935 DLAQGFLYGRPMTAQRFEKTVLD 957 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 146/455 (32%), Positives = 240/455 (52%), Gaps = 13/455 (2%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYE--EQNENAMRFPVSDLPNKALLMEMLEQVVAR----K 267 DE G + L + +R + A ++DLPN+AL+ + L Q + K Sbjct: 595 RDEAGQVSHHVALFSDISERKEQEAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAARQK 654 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + ++ L A + LL + ++L+ + + + G +F +I Sbjct: 655 NRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPE 714 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + P A L Q++L + I+ L SIG+++F + + ++L A A + Sbjct: 715 LASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSELQELLVSADLAMYH 774 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G+N+ QFF P+ +RLT E+ + ALE Q + QPQ + + +LV E L Sbjct: 775 AKAQGRNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEAL 834 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSAL 506 LR Q P+ P I E GL+V +G WVL+E+CR AAW G L ++VN+SA Sbjct: 835 LRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSAR 894 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 QL P+++A++ L R+R+ L LEVTES ++D AV L+ + G+ +A+DDF Sbjct: 895 QLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDF 954 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K D++KID+ FV LP D+++++AI+ LA++L +Q +AEGV Sbjct: 955 GTGYSS---LTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGV 1011 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 E+E Q D+LA+AG + QG+L RP Sbjct: 1012 ESEEQLDFLAQAGCDVVQGYLTGRPQSAGELTAQL 1046 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 128/458 (27%), Positives = 235/458 (51%), Gaps = 15/458 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D G + + + + E+ A P++ L N+ LLM+ L ++ Sbjct: 1010 DTSGNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNT 1069 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ I + ++ L + LL+ + +++ +L +A+ G +F V+ Sbjct: 1070 PLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDT 1129 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTA 387 E A+ + +++L +S++L ++ +L SIG+A++ D A+ L A +A + A Sbjct: 1130 GENG-AVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQA 1188 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 ++ G+N +FF + + + + ES + AL + QF ++ QPQ SG ++ E L+ Sbjct: 1189 KNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALI 1248 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSAL 506 R P+ P I E G ++ +G WVL + R + W E G + ++VNLSA+ Sbjct: 1249 RWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAV 1308 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q + ++ ++++L + P L LE+TES + +P A + ++ L G+++++DDF Sbjct: 1309 QFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDF 1368 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K + LKID+ F+ L D S+I AII L+++L L+ IAEGV Sbjct: 1369 GTGYSS---LSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGV 1425 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ET+AQ D+L + QGF +++ L E F+ Y ++ Sbjct: 1426 ETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFYEKQ 1463 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 134/483 (27%), Positives = 235/483 (48%), Gaps = 14/483 (2%) Query: 186 LRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRF 245 L ++ + L + P + +++ +G + ++ + ++ +E A Sbjct: 368 LDKLSTNIRTKWGYSLNVEISSSPFVERNNVMGSIHIVRDVTE--SKKMEDEIRYQATHD 425 Query: 246 PVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVE 301 ++ L N+ L M+ L +++ A+M + + + L A + LL + Sbjct: 426 ILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDLDRFKSINDSLGHAAGDKLLQLISG 485 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +LK + +A+I G ++ ++ + P A + ++L+ M++ I+ QL S Sbjct: 486 RLKECVRETDTVARIGGDEYNILITQMAHPEDATAIANKILSSMNKPFAIDGHQLHVTIS 545 Query: 362 IGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG++++ D AE L A A + A+ +G+N QF++P +R+ E+ + AL Sbjct: 546 IGISLYPTDGEDAETLLKNADIALYHAKEQGRNNYQFYNPALNTRTLERVKMENRLRQAL 605 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E H+ + QPQV M +G++ AE L+ P+ P I E G + + WVL Sbjct: 606 ERHELVVLYQPQVAMDTGQVTGAEALVYWLHPELGLLSPGHFIPMAEEIGFITDIDEWVL 665 Query: 481 EESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 E +C AWQ+ G ++VN+S+ Q P++V + +L + P L LE+TE Sbjct: 666 ETACAQNKAWQDEGYRSFNVTVNMSSKQFRRPDLVDQVRRVLNATGLPPRFLELEITEGT 725 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 + D + L L V A+DDFG GY+ L +K LPI LKIDK F+ G+ Sbjct: 726 AMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSS---LSCLKKLPIRKLKIDKSFIFGVNT 782 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 P D +++A II +A +L L++IAEGVE Q ++L + QGFL++RP+P E F Sbjct: 783 DPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFLHQNHCDQMQGFLYSRPIPAEDFRR 842 Query: 657 SYL 659 + Sbjct: 843 LIM 845 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 130/459 (28%), Positives = 221/459 (48%), Gaps = 14/459 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D G + + + Q + +R E E A ++ L N+ L + L+QV+AR + Sbjct: 223 DANGNPLYTVPVIQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQS 282 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 ALM + + + L A + +L E+L L +A++ G +F +I + Sbjct: 283 RFALMFLDLDRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDY 342 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTA 387 +E + + ++L +S + ++ S+G+A++ D A L A A + A Sbjct: 343 KEDANLPRVADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAA 402 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G + +F+ + A R+ E+++ ALE +F I QPQ+++ + K+ E LL Sbjct: 403 KESGGDTFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALL 462 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSAL 506 R Q P P I E L++ +G WV+ W++ G + + +N+S Sbjct: 463 RWQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGR 522 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q + P+ V + LL P L E+TES + D AAV L L+ G+ +A+DDF Sbjct: 523 QFVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDF 582 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L +K LP++ LKIDK F+ L D +++ A I +A+ L L + AEGV Sbjct: 583 GTGYSS---LSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGV 639 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 ETE Q ++ K QGF F+RPL +++L ++ Sbjct: 640 ETEGQYGFVQKRECDEVQGFYFSRPLSPSEVADAWLIKR 678 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 141/463 (30%), Positives = 235/463 (50%), Gaps = 16/463 (3%) Query: 199 KELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLPNKALL 256 L +QL + + D G + + R+ E+ A ++ LPN+ LL Sbjct: 561 GALFWNQLYIAPVPDAD--GQTTHHIAVINDVTALIRYQEQLEYQANYDSLTRLPNRNLL 618 Query: 257 MEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 + L+ + + A++ I + ++ L + + LL + ++L Sbjct: 619 RDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDT 678 Query: 313 LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT 372 +A+ G +F ++ + I ++V +SE + ++ +L CS+G ++F D Sbjct: 679 VARHGGDEFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGD 738 Query: 373 -AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 AE L +A A + A+ G+N QF+ P+ +A RL E + AL +++F + QP Sbjct: 739 DAETLMKKADLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHYQP 798 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ 491 QV++ +G++V E L+R P+ P I E GL+ + WVL E+CR AWQ Sbjct: 799 QVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQ 858 Query: 492 ERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 + G+ +SVNLSA Q ++ ++++L + P L LE+TES + + AV++ Sbjct: 859 DEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSM 918 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAI 607 L L G+ +A+DDFG GY+ L ++K P+D LKID+ FV + D ++ +AI Sbjct: 919 LNELHALGIGLAIDDFGTGYSS---LSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAI 975 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 I LA SLNLQ+IAEGVET Q D+L + QG+ FA+PLP Sbjct: 976 IALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLP 1018 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 138/460 (30%), Positives = 229/460 (49%), Gaps = 12/460 (2%) Query: 212 HQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT- 270 + D L+ + + + A V+ LPN+ LM L Q + + Sbjct: 406 RRLDVERALLEETTQRMNEQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFS 465 Query: 271 ---ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ I + ++ L + LL + +L+ + I+A++ G +F V+ Sbjct: 466 SRLAVIFIDLDRFKNINDSLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPL 525 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + A +++ +S+ +E +L SIG++++ D T ++L A A + Sbjct: 526 INSNISAAHAVRKIQQTLSQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYH 585 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N QFF + Q RL ESD+ ALE + + QPQ+++ SG++V E L Sbjct: 586 AKSAGRNSYQFFTQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEAL 645 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 LR + P PD I E GL++++G + L+ +C LA W +G+ L ++VNLSA Sbjct: 646 LRWRHPVRGAVAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSA 705 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q N+ + + ++L + L LE+TES +DDP+ A+ LR LR GV +A+DD Sbjct: 706 RQFKQSNLPSLLADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDD 765 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K P++ LKID+ FV G+ D+ + AA I LA +L +++AEG Sbjct: 766 FGTGYSS---LSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEG 822 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VETEAQ +L I QG+ F+ PL + Sbjct: 823 VETEAQCRFLRGQQCDILQGYFFSEPLSAAGIASYLAANR 862 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 132/479 (27%), Positives = 239/479 (49%), Gaps = 16/479 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLP 251 N L + + DD G++ + + + QR EQ A ++ LP Sbjct: 325 NRAKDGSLFWEYATISPIRDDD--GVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLP 382 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL + + + + LM + + + L + LL + ++L+ L Sbjct: 383 NRLLLEDRVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTL 442 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F V+ Q + +++ + E + + ++ SIG+A++ Sbjct: 443 RRSDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIY 502 Query: 368 YGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D L A +A + A+ KG+N F+D + A RL E + AL +F Sbjct: 503 PDDGDNFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQ 562 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QPQV++ +G+ E L+R P+ P I E L+ +G WVLEESCR Sbjct: 563 LFYQPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQ 622 Query: 487 LAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 +AAW+E G+ + ++VN+S Q ++ +V + +L+ +Y + P L +E+TES + +P Sbjct: 623 IAAWREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPD 682 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSS 602 A+ L LR G++V++DDFG GY+ L ++K LP+ +K+D+ FV + +++ Sbjct: 683 RAIEQLTRLREIGIQVSVDDFGTGYSS---LSYLKRLPLSTIKVDRSFVRDVNNQSDNAA 739 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +++AI+ LA +L++ ++AEGVETE + L AG QGF +A+P+P + L + Sbjct: 740 IVSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWMLRQ 798 >UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR44_RHORT Length = 678 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 170/667 (25%), Positives = 313/667 (46%), Gaps = 22/667 (3%) Query: 3 VSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAIL 62 + + L ++Q V+ + L F + L + + A S++ LS+A+ Sbjct: 2 LGKFLAVQQALRVSLLSLAVSLGFLGMQTVWLASAADRDYLILRDRTASSLQSGLSNALW 61 Query: 63 KGDIPEAEAILASIKPAGVVSRADVVLPN-QFQALRKSFIPERPVPVMVTRL-------- 113 D A+AI++ A + V+ N + A +S P + + L Sbjct: 62 NFDAETAKAIISDALRANPIRSIHVIDSNGRVFADGQSAQPVVAPSLWESYLGWLVDLKS 121 Query: 114 -FELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTV 172 L ++ S + + ++ + D + + L+ V L++ L++ + Sbjct: 122 EMTLDLRFSSPTDDHYQG---MVVGFVFITFDKDHFIRGIADRLADQVLGILVIVLVVAL 178 Query: 173 AISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ 232 S + I P+ +AR + + ++ L +PR HQ +EIG + N L Sbjct: 179 TTSIVFHLFISRPIIRVARGVADVDPEDPAATVLTVPRAHQRNEIGRMTNRLNHLLGRLA 238 Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLK 288 E A R P++DLPN++L++EM++ + R A+M + + + L Sbjct: 239 EVQGELRLLATRDPLTDLPNRSLILEMMDATINRVALDGGRCAVMFLDLDMFKHVNDSLG 298 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 +++L + + +V++ + ++ G +F V+ + + + ++++T + Sbjct: 299 HEAGDLILKDIGRRFDAVVAGLGAVGRLGGDEFVVLIDRYEREDDLARIARRLITTVKRP 358 Query: 349 LPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + ++ + S+G+A + D T + L A +A + + G Q FFD E A Sbjct: 359 IEVDGTLVHSSTSVGIACYPVDGATPQGLLRNADTAMYAVKASGPGQWAFFDRSMTENAL 418 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 RL E+ + +A+E QF + QP++++ S ++ E L+R +G P I E Sbjct: 419 VRLRTEASLRSAIEKGQFVLHYQPKLDLRSNRISGCEALIRW-DLNGDLVPPGRFISIAE 477 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 G++ +G WVL E+C+ W+ +P+++N+S QL + D L+++ Sbjct: 478 ETGMIYDIGLWVLREACQAQRRWRRHAGAVPIAINVSVRQLKDERFIDDFLDIIQASGAD 537 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 P L +EVTES + + +LR +R+ GVR+++DDFG GY+ L ++K+LPID+L Sbjct: 538 PELLEVEVTESALMSSIEVSAHLLREMRSHGVRLSIDDFGTGYSS---LAYLKNLPIDIL 594 Query: 588 KIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFAR 647 KID+ FV LP +SS+ II LA + L+ +AEG+ETE Q WL G + QGFL + Sbjct: 595 KIDRSFVSDLPEESSIPRMIIGLAGQMGLRTVAEGIETEGQLAWLRDNGCDMIQGFLIEK 654 Query: 648 PLPIEIF 654 PLP F Sbjct: 655 PLPEADF 661 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 127/455 (27%), Positives = 220/455 (48%), Gaps = 14/455 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D G + L + +R +E A P++ L N++LL + L++ +A + Sbjct: 571 RDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHG 630 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 L+ + + + L + LL+ + +L S + +A++ G +F V+ + Sbjct: 631 CKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHD 690 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + + + +++ ++ E + + S+G+ +F D + L A A + Sbjct: 691 LADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYK 750 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ GKN+ Q + P A R+ E+D+ A+E F + QP V+ SG LV AE L Sbjct: 751 AKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEAL 810 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 +R + P+ P I E CGL+V +G WVL E R W RG L L++N+S Sbjct: 811 IRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSG 870 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 +Q + + LL + +L+ E+TES + A + ++ G+ ALDD Sbjct: 871 VQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDD 930 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEG 622 FG G++ L ++K P+D++KID+ FV P D++++ AII +A SL L++ AEG Sbjct: 931 FGTGFSS---LSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEG 987 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 VE+ QR++L G QG+L +PL + FE Sbjct: 988 VESAEQREFLRALGCDYLQGYLIGKPLAADAFEAL 1022 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 159/456 (34%), Positives = 238/456 (52%), Gaps = 21/456 (4%) Query: 218 GMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTA 271 G L + + + QR E+ + A P+++LPN+ LL++ LEQ +A +Q Sbjct: 531 GDLTHWVAVGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQALADCTITRQEGV 590 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 LM I + + + ++ ++LL + +LK + +A++ G +F V+ + Sbjct: 591 LMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGDEFVVMLQDLGTQ 650 Query: 332 WHAIT-----LGQQVLTIMSERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRAISAAF 385 A T + ++VL + E + Q SIGV F + +L +A A + Sbjct: 651 PEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMY 710 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N + FFDP + +D+ L HQF + QPQV+ ++ E Sbjct: 711 QAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQVD-REQRITGVEA 769 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNL 503 LLR + P P I E GL++ +G WVLE++C LA WQ+R L ++VN+ Sbjct: 770 LLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNV 829 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S Q HP+ V ++ + IQP L LE+TES D A+A + L+ GV +AL Sbjct: 830 SVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLAL 889 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFGMGY+ L ++K LP+D LKIDK F+ + P D+++ +AII LAQSL L +IA Sbjct: 890 DDFGMGYSS---LSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIA 946 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 EGVETEAQR +LA G G QGFLF PLPI FE Sbjct: 947 EGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFEA 982 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 126/444 (28%), Positives = 214/444 (48%), Gaps = 12/444 (2%) Query: 227 NQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRD 282 +R A ++ LPN+ L E L +A + + + + + Sbjct: 420 MAIAQKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKV 479 Query: 283 TAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVL 342 L + LL + +LK L +A+ G +F ++ + + ++L Sbjct: 480 VNDTLGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRIL 539 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +S I+ +L S+G+A+ D A+ L A +A + A+ +G+N Q F + Sbjct: 540 DKLSIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEE 599 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 A +LT E+D+ AL +F ++ QPQVE+++GK+V E L+R Q P + PD Sbjct: 600 MHREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQ 659 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLEL 520 I E GL+ +G WVL+ +C +WQ G+ + ++VNLSA Q ++ +L+ Sbjct: 660 FIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQT 719 Query: 521 LTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMK 580 L I P L LE+TES + D + L+ LR G+ + +DDFG GY+ L +K Sbjct: 720 LETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSS---LNVLK 776 Query: 581 SLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGV 637 P++ LKID+ FV+ + D+++ I+ L+Q L L+++AEGVET Q +L Sbjct: 777 HFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHC 836 Query: 638 GIAQGFLFARPLPIEIFEESYLEE 661 +AQG+ F P+P + + Sbjct: 837 DLAQGYYFCPPVPAIEIAKLLRQS 860 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 138/483 (28%), Positives = 241/483 (49%), Gaps = 21/483 (4%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKA 254 ++P + H + D ++ + ++ +R +E A ++ LPN+ Sbjct: 353 SMPDGSVRWHITNAIPHREPDG-SVVSHGFTMDITDRKRAEQEIERLAFYDALTGLPNRR 411 Query: 255 LLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 +L++ L++ VA +Q AL+ I + +D L + LL + +L + + Sbjct: 412 MLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLNDTLGHDMGDHLLSQVAARLLACVRET 471 Query: 311 MILAQISGYDFAVIANGV-----QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 +A+ G +F V+ + + A + +++L +++ + Q SIG+ Sbjct: 472 DTVARFGGDEFVVMLETLRPELTEAASQAEIVAEKLLASLNQPFALGGQQHYSTPSIGIT 531 Query: 366 MFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 +F + + ++L RA A + A+ G+N +FFDP A R E+D+ L + Sbjct: 532 LFGDERLSVDELLKRADLAMYQAKGAGRNTQRFFDPDMQAAVNARSNLEADLRQGLARGE 591 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 ++ QP V+ + +L+ E L+R + P P I E GL++ +G VL+ +C Sbjct: 592 LCVYYQPVVDHRA-RLLGVEALVRWRHPVRGMISPADFIPLAEQTGLILPLGQQVLQTAC 650 Query: 485 RLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRID 542 L W +++ L +SVN+SA Q P VA++L+ L P L LE+TES + Sbjct: 651 GQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQGCGADPRKLKLELTESLLLG 710 Query: 543 DPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PG 599 D +A + L+ GV ALDDFG GY+ L ++K LP+D +KID+ FV + P Sbjct: 711 DVEDTIARMEQLKREGVGFALDDFGTGYSS---LSYLKRLPLDQVKIDQGFVRDVLTDPN 767 Query: 600 DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 D++++ I+ LAQSL+L+++AEGVET Q +L G QG+LF RP P+E ++YL Sbjct: 768 DAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPGPVEDI-DAYL 826 Query: 660 EEK 662 + Sbjct: 827 SHE 829 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 136/467 (29%), Positives = 243/467 (52%), Gaps = 14/467 (2%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKA 254 ++G P+ I L N+ + R E A P+++LPN++ Sbjct: 540 GPYGILGAYSPEPQRFTSSSINFLQSLANILATAIDRKTTEERLTYLAQFDPLTELPNRS 599 Query: 255 LLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 L ++ L Q + ++ + + + + + LL+ + ++L+ + Sbjct: 600 LFLDRLRQAMEHAHRNRRRVGVVFADLDRFKIVNDTMGHSTGDELLIHVAKRLQQCVRSC 659 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 +A++ G +FA+I + + +P A + ++V++ + +E ++ S+G++++ GD Sbjct: 660 DTVARLGGDEFALILSDLVQPEDATLIAEKVISALQVPFELETQEIYVSASLGISIYPGD 719 Query: 371 L-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 A+ L A +A F A+ +G QF+ PQ E A RL E+ + AL +F + Sbjct: 720 GTDADSLLRNADTAMFQAKEQGPAIYQFYLPQMNERAVARLKIETQLRGALARREFVLHY 779 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QP+ + +G++ E LLR Q P P I +E GL+V VG WV++ C + Sbjct: 780 QPKASLINGEITGFEALLRWQHPAHGLVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIRE 839 Query: 490 WQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAV 548 WQ +G++L P+++NLSA Q ++ + + E L I P L E+TES + + A Sbjct: 840 WQGQGLVLHPIAINLSARQFQQQDLDSIIGETLRATNIDPRLLEFELTESVLMKEAEMAA 899 Query: 549 AILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIA 605 L+ L+ GV++++DDFG GY+ L ++K P+DVLKID+ F+ + P D+++ Sbjct: 900 NALQNLKAFGVQISMDDFGTGYSS---LAYLKRFPLDVLKIDRAFIRDVTTDPDDATITV 956 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 A+I LA SL L+++AEGVET AQ ++L + G QG+ F++PLP+E Sbjct: 957 AMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGYYFSQPLPLE 1003 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 130/453 (28%), Positives = 228/453 (50%), Gaps = 14/453 (3%) Query: 220 LVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALM 273 + + + R EQ A ++ LPN++L ++ LE + Q A++ Sbjct: 490 ITHFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVL 549 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 I + + L +ILL + E+++ + +A++ G +F VI + Sbjct: 550 FIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSA 609 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGK 392 + Q++++ + I+ +L SIGV+++ D A L RA +A + A+ +GK Sbjct: 610 ISLITQKIISACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGK 669 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 + QFF + AA ++L ++ + AL +F ++ QP + M SG +VS E L+R P Sbjct: 670 SCCQFFTTEINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVSVEALIRWVDP 729 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW-QERGIMLPLSVNLSALQLMHP 511 + P+ I E GL++ +G WVL+ +C W Q + +++NLSA QL Sbjct: 730 ELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLSARQLEQT 789 Query: 512 NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYA 571 + + E+L + L LE+TES I+ +++ L L+ G R++LDDFG GY+ Sbjct: 790 DFSERVSEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYS 849 Query: 572 GLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQ 628 L ++K PID +KID+ FV+G+ P D+++ A+ +A SL +IA+GVET Q Sbjct: 850 ---PLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGVETREQ 906 Query: 629 RDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ++L + V AQG+ + P+P E + E+ Sbjct: 907 LNFLNEIKVDEAQGYFISYPVPAEELTQKLREK 939 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 140/463 (30%), Positives = 237/463 (51%), Gaps = 21/463 (4%) Query: 215 DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQ 268 D G + R Q + + A ++ LPN+ L ++ LE +A + Sbjct: 487 DLHGNITRIEGAIQDISAQKVAESRIQHLAFYDSLTSLPNRQLFIDRLEHTLAYSARTSK 546 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 + A++ I + + + ++LL + ++ L +A+ G +F V+ + + Sbjct: 547 SGAVLFIDLDNFKTLNDTMGHDLGDMLLQQVAMRIAGCLRESDTVARFGGDEFVVLLHEL 606 Query: 329 -----QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAIS 382 + A + +++L + + SIGV +F T +++ RA Sbjct: 607 SGNHQEAAAQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQPTTVDEILKRADL 666 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVS 442 A + ++ G+N I+FFDP+ R+ E D+ N L N +F + QPQV+ G+L+ Sbjct: 667 AMYQSKAAGRNVIRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCYQPQVD-NQGRLLG 725 Query: 443 AEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLS 500 AE LLR + P P I E GL+V+VG+WV+ +C+ L W ++ + L L+ Sbjct: 726 AEALLRWRNPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLA 785 Query: 501 VNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVR 560 VN+SA QL + V ++E+L P L LE+TES +++ +A + L+N GV Sbjct: 786 VNVSAKQLRQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKMTELKNIGVG 845 Query: 561 VALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQ 617 ++DDFG+GY+ L ++K LP+D LKID+ FV + P D+ + II L +SLNLQ Sbjct: 846 FSIDDFGIGYSS---LSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQ 902 Query: 618 MIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +IAEGVET +QR++L G QG+LF++P+P + FE ++ Sbjct: 903 VIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPADEFERDVVQ 945 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 145/456 (31%), Positives = 233/456 (51%), Gaps = 21/456 (4%) Query: 218 GMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTA 271 G++ + +R +E A + LPN+ LL++ L+Q +A ++ A Sbjct: 713 GIVTHYVGTFMDITRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHRRQGA 772 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE- 330 L++I + + L + ++LL + ++L S + +A++ G +F V+ + E Sbjct: 773 LLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLENLSEH 832 Query: 331 ----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 A TL +++L + + ++ + + SIG+ +F T E L RA A + Sbjct: 833 LEAAATQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAMY 892 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N ++FFDP+ R E+ + A+ + +F ++ Q QV+ G L E Sbjct: 893 QAKAVGRNTLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVD-GQGHLTGCEA 951 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNL 503 LLR Q P+ P I E GL++ +G WVL+ +C LA W R L ++VN+ Sbjct: 952 LLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTVAVNV 1011 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S Q + V +L +L P L LE+TES I D +A + L+ GV +L Sbjct: 1012 SVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGVGFSL 1071 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++K LP+D LKID+ FV + P D+++ +I L SL L +IA Sbjct: 1072 DDFGTGYSS---LSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVIA 1128 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 EGVE EAQRD+LA+ G QG+LF RPLP++ FE Sbjct: 1129 EGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFEA 1164 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 126/441 (28%), Positives = 219/441 (49%), Gaps = 13/441 (2%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 +++ + + A P++ LPN+ L L Q + R Q ++ I + ++ Sbjct: 349 IKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDS 408 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL+ L E++K + LA++ G +F ++ V++ + Q ++ +++ Sbjct: 409 LGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLT 468 Query: 347 ERLPI-ERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + ++ + SIG+++F D A +L + A + A+ +G+N ++ Sbjct: 469 SPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYHTEALSV 528 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 AA +RL E+ + AL + + QP V+ +G +V E L+R Q P + P I Sbjct: 529 AANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIP 588 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTR 523 E GL+V +G WVL +C+ AW + G+ L ++VNLS Q N+V + +L Sbjct: 589 IAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEE 648 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 ++ L LE+TES ++ ++ L L+ GV +A+DDFG GY+ L ++K P Sbjct: 649 TQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSS---LIYLKRFP 705 Query: 584 IDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 ID LKID+ FV L D + A II +A+ L L ++AEG+E+E Q +L + Sbjct: 706 IDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYY 765 Query: 641 QGFLFARPLPIEIFEESYLEE 661 QG+LF RP+P E E Sbjct: 766 QGYLFHRPVPAIELEAWLREH 786 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 132/471 (28%), Positives = 240/471 (50%), Gaps = 15/471 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDL 250 LN E+ ++ L D G + + + +R A P++DL Sbjct: 550 LNRRKNGEVYWSITSISPLRND--SGEITHFIANVEDINERKNAEATIEHLAYFDPLTDL 607 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ +L + LE + R + ALM + ++ + + ++LL + + V Sbjct: 608 PNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGV 667 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + ++ ++ G +FA+I + + + + + Q+++ +++ +P++ ++ SIG+A+ Sbjct: 668 VRDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIAL 727 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D + L A A + A+ +GKN +F+ + R+ E + A E + Sbjct: 728 FPRDGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYAKERQEL 787 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QP+V + SGK+ E LLR PD P I E L++ +G WVL +C Sbjct: 788 ELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACL 847 Query: 486 LLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 W+E+G++L ++VNLSA+QL P +V + ++ IQP L LE+TES +++P Sbjct: 848 QQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPD 907 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSS 602 V +L LR G +++DDFG GY+ L ++KS P+ +LKID+ FV L GD + Sbjct: 908 EVVQLLERLRTLGCSISIDDFGTGYSS---LSYLKSFPVTILKIDRSFVRDLAHNSGDRA 964 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 + +++ LA +L+++ +AEGVE+E Q L + G QGF+++RP+ + Sbjct: 965 IARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQ 1015 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 138/478 (28%), Positives = 237/478 (49%), Gaps = 16/478 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLP 251 N E+ + + + D G + L + E + +++LP Sbjct: 236 NRRKNGEIYPQWVNISAIRTGD--GQTESYVGVFTDLTRIKESEENLLYLSGHDALTELP 293 Query: 252 NKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L + L Q + A++I+ + + + + LL + +L+++ Sbjct: 294 NRLLFHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAIC 353 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 + LA++ G +F ++ + + A L Q+VLT +++ + I ++ SIG+ ++ Sbjct: 354 PAKATLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVY 413 Query: 368 YGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D L A SA + A+ G+N QF+ + A+ R+ ES + NA++ +F Sbjct: 414 PLDGEKPSVLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARILLESGLRNAVDRQEFL 473 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QPQ+E+ +GKL+ E L+R Q P+ P I E GL++ +G W L+E+CR Sbjct: 474 LFYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQ 533 Query: 487 LAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 W ++ G+ L +SVNLS +Q P+ ++ + + P L LE+TES + D Sbjct: 534 SKVWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVE 593 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSS 602 + L L GV +A+DDFG G++ L ++K PID LKID+ FV P D++ Sbjct: 594 ETLEKLTILSRFGVLLAIDDFGTGFSS---LSYLKKFPIDTLKIDQSFVRNCTRDPEDAA 650 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +I A I LA SLNL++IAEGVE Q ++LA+ QG+ + RPL + FE L+ Sbjct: 651 IIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEMFMLD 708 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 128/430 (29%), Positives = 222/430 (51%), Gaps = 14/430 (3%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 Q E A ++DLPN+ L + L +A Q A+M + + + L Sbjct: 440 QDKEEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLINDTL 499 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + + LL + +L+ L +A+ G +F V+ ++ AI ++L + Sbjct: 500 GHSIGDELLKEVALRLQDCLRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDALKA 559 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 I R +L SIG+A++ D AE L A A + ++ +G+ Q ++P A Sbjct: 560 AFVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTCQLYNPTMN--A 617 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +++ E+ + +AL+ +F + QP+V + +G++V E L+R + P+ P I Sbjct: 618 KEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIPIA 677 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+V +G WVL +C+ W + G+ L +++NLSA Q PN+V + +++ Sbjct: 678 EETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIESTG 737 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + P L LE+TE+ + + A +IL L+ GV +A+DDFG GY+ L ++K LP + Sbjct: 738 LNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSS---LNYLKQLPFN 794 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ F++ L D +I A+I L + L+L+++AEGV+ E Q + L I QG Sbjct: 795 TLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQG 854 Query: 643 FLFARPLPIE 652 +LF+RPL ++ Sbjct: 855 YLFSRPLSVD 864 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 142/465 (30%), Positives = 235/465 (50%), Gaps = 28/465 (6%) Query: 218 GMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTA 271 G++ + + QR ++ ++ A P++ LPN+ LL++ L V+A + A Sbjct: 451 GLVTHYVATHIDITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGA 510 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE- 330 +M I + + + LL + ++LKS + +A++ G +F V+ + Sbjct: 511 IMFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAAD 570 Query: 331 ---PWHAITLGQQVLTIMSERLPI---------ERIQLRPHCSIGVAMFYGDLT-AEQLY 377 + ++L + + + SIG+ +F T ++L Sbjct: 571 SMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELL 630 Query: 378 SRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTS 437 +A A + A+ G+N I+FFDP+ A R+ E+D+ A+E QF ++ QPQV S Sbjct: 631 KQADLAMYQAKDSGRNAIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGES 690 Query: 438 GKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--I 495 +L AE LLR P I E GL++ +G WVLE +C LA W + Sbjct: 691 HRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMA 750 Query: 496 MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 L ++VN+SA Q+ + V +L +L P L LE+TES + + +A + L+ Sbjct: 751 QLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLK 810 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQ 612 + GV +LDDFG GY+ L ++K LP+D LKID+ FV + D+++ I+ LA+ Sbjct: 811 SRGVGFSLDDFGTGYSS---LSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAE 867 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 SL L +IAEGVETE QR++LA++G QG+LF++PLP+ FE+ Sbjct: 868 SLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQW 912 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 136/451 (30%), Positives = 237/451 (52%), Gaps = 15/451 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLE----QVVARK 267 DE G + + +R E+ + A ++ LPN+ L LE + + Sbjct: 773 RDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQ 832 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+M I + ++ L ++LLL + +LK+++ I+A++ G +F V+ + Sbjct: 833 TQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSD 892 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + + + + +++ I+ L SIG+++F D + E L A A + Sbjct: 893 TDH-DRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYR 951 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N QFF +R E+ + A+ ++ ++ QPQV+++SG++V E L Sbjct: 952 AKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEAL 1011 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSA 505 +R Q P+ PD I E +++ +G WVLE + LA W+++G L ++VNLSA Sbjct: 1012 IRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSA 1071 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 QL +VAD++ +LT++++ G L LE+TES + P +L LR G+ +A+DD Sbjct: 1072 HQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDD 1131 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K LP+D LK+D+ FV+ + P D+++ AA I +A L L ++AEG Sbjct: 1132 FGTGYSS---LSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEG 1188 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 VE EAQ L+ G + QG+ F++PL + Sbjct: 1189 VENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 146/459 (31%), Positives = 230/459 (50%), Gaps = 19/459 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEMLEQVV--ARKQT 269 DE +N + +R E ++ A P++ LPN+ LL + L+ + Q Sbjct: 587 RDENDQPDAILAINTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQVRHGQV 646 Query: 270 TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ 329 AL++I + + L A ++LL + ++L++ L LA++ G +F ++ G+ Sbjct: 647 GALLLIDLDNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIVLEGLS 706 Query: 330 -EPWHAITLG----QQVLTIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSRAISA 383 P A +L +++L + + SIG+ +F T ++L RA A Sbjct: 707 ASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRADLA 766 Query: 384 AFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSA 443 + A+ G+N ++FFDP R E D+ AL F + Q QV+ G + A Sbjct: 767 MYQAKAHGRNALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDAR-GCVSGA 825 Query: 444 EVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSV 501 E LLR Q P W P I E GL++ +G WVL+ +C L AW + M L L+V Sbjct: 826 EALLRWQHPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAV 885 Query: 502 NLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRV 561 N+SA Q + A +L + R P L LE+TES +D+ + + L+ G+ Sbjct: 886 NVSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGF 945 Query: 562 ALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQM 618 +LDDFG GY+ L ++K LP+D +KID+ FV + D+S+ +I+ L QSLNL++ Sbjct: 946 SLDDFGTGYSS---LAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEV 1002 Query: 619 IAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 +AEGVET+AQ +LA+ G QG+LF RP P FE Sbjct: 1003 VAEGVETDAQHAFLAEHGCQAYQGYLFNRPQPARQFEAW 1041 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 130/442 (29%), Positives = 225/442 (50%), Gaps = 13/442 (2%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGV 286 +++ A ++ LPN+ L+ L + R A + + + ++ Sbjct: 681 IKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDS 740 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL+ L +LK L LA++ G +F V+ +++ + Q ++ +++ Sbjct: 741 LGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLA 800 Query: 347 ERLPI-ERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + ++ + SIG+++F D + +L A A + A+ +G+N ++ Sbjct: 801 TPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSI 860 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 AA +RL E+ + AL +F + QP ++ G+++ E L+R Q PD + P I Sbjct: 861 AANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIP 920 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTR 523 E GL+V +G WVL +C AW + L ++VNLS Q N+V + ++L Sbjct: 921 IAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEE 980 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 ++ L LE+TES ++ ++ IL+ L++ GVR+++DDFG GY+ L ++K P Sbjct: 981 TKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSS---LTYLKRFP 1037 Query: 584 IDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 ID LKID+ FV GL P D + A II +A++L L ++AEGVE+E Q D L + G Sbjct: 1038 IDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYY 1097 Query: 641 QGFLFARPLPIEIFEESYLEEK 662 QG+LF RP+P + E + E K Sbjct: 1098 QGYLFHRPVPAQELEVWFRENK 1119 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 140/462 (30%), Positives = 235/462 (50%), Gaps = 21/462 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVV---ARKQ 268 DE G + + QR EE A ++ LPN+ LL++ L + AR + Sbjct: 670 RDENGKTTEYVAIFSDITQRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSR 729 Query: 269 TT-ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + + + ++LL+ + E++K + +A++ G +F ++ Sbjct: 730 RFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEE 789 Query: 328 VQEPW-----HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSRAI 381 + H + +++ + +S ++ SIGV ++ G + + + L A Sbjct: 790 IDTRAEETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHAD 849 Query: 382 SAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLV 441 A + A+ G+N ++FFDP +A + R+T E+D+ +AL N Q ++ Q QV+ + + Sbjct: 850 MAMYQAKDSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVD-NDRRAI 908 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPL 499 AE L+R P P I E L++ VG WVL+ +C LA W +R + L L Sbjct: 909 GAEALVRWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLIL 968 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 +VN+S Q V + EL+ Y I P L LE+TES ++D V + L++ GV Sbjct: 969 AVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGV 1028 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNL 616 R+++DDFG GY+ L ++K+LP+D LKID+ FV + D+ M+ II +AQ+ L Sbjct: 1029 RLSMDDFGTGYSS---LSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRL 1085 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 +IAEGVETEAQ +L + G QG+ F +P PIE F+ Sbjct: 1086 NVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQL 1127 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 129/458 (28%), Positives = 220/458 (48%), Gaps = 15/458 (3%) Query: 206 LALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQV 263 L + L IG L S + + EQ E A ++ LPN+ LL E EQ+ Sbjct: 118 LPIMVLGSPSVIGGLPASVGTVLDISAQKAAEQRIRELADYDVLTGLPNRRLLRERFEQL 177 Query: 264 VARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 +A + A++ + + + L + + LL + +L SV+ LA++ G Sbjct: 178 LAAAEREKSEIAVIFLDLDHFKRVNDSLGHSVGDELLCEVARRLDSVVRRIDTLARLGGD 237 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYS 378 +F G A+ + ++++ + S + +L S+G++++ D E L Sbjct: 238 EFIFAMPGF-HTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLR 296 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A +A + A+ G+N QF+ + RL ES++ AL ++F + QP V + +G Sbjct: 297 NADTAMYRAKEMGRNAFQFYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLETG 356 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-ML 497 ++ E L+R P+ +PD I E GL+ +G WVL E+CR AW + G+ + Sbjct: 357 LIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPI 416 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 ++VN++ +Q V + L + L LE+TE + D + L L Sbjct: 417 CMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHRM 476 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSL 614 GV ++LDDFG GY+ L ++K P+ LKID+ FV L P D ++ + I+ + +SL Sbjct: 477 GVELSLDDFGTGYSS---LAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSL 533 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + ++AEGVE Q L K G +AQG+ F+RP+ + Sbjct: 534 RMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSAD 571 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 137/479 (28%), Positives = 241/479 (50%), Gaps = 23/479 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLP 251 N + ++ L + + D G++ + + + N A P++ LP Sbjct: 299 NRSKSGDIYAKNLTITAV--RDGKGVVSNYVATFRDITTSKAASEKINNLAYFDPLTQLP 356 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ +L++ L V+ Q AL+ + + + L ++LL + +L + Sbjct: 357 NRRMLLDSLRHVLTISARSNQHCALLFLDLDNFKTLNDTLGHDVGDLLLQQVATRLTDCV 416 Query: 308 SPRMILAQISGYDFAVIANG-----VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 I+A++ G +F V+ ++ A + ++++ +++ + + SI Sbjct: 417 REGDIVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSI 476 Query: 363 GVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GV +F G+ T E+L +A A + ++ G+N FF+ E+ R E D+ A+E Sbjct: 477 GVTIFSGNETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIARADMERDLRKAIE 536 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++QF + Q QV +SG+ + AE L+R Q P+ P I E GL++ +G WVL+ Sbjct: 537 DNQFQLHYQAQVS-SSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLD 595 Query: 482 ESCRLLAAWQERGI--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C L AWQ+ + L L+VN+SA QL + V + L R+ I P L LE+TES Sbjct: 596 SACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKLELTESM 655 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 +++ + + L G+ +LDDFG GY+ LQ++K LP++ +KID+ FV L Sbjct: 656 LVENISDIITKMNILSKIGISFSLDDFGTGYSS---LQYLKKLPLNQIKIDQSFVRDLIT 712 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D +++ II ++ SL++ +IAEGVET +R +L G QG+LF++P+PI FE Sbjct: 713 DASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINEFE 771 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 130/456 (28%), Positives = 226/456 (49%), Gaps = 15/456 (3%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKALLMEMLEQVVARKQTTA---- 271 G + +R +E++ A ++ LPN+ L+M+ LEQ + + Q T Sbjct: 387 GETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVC 446 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 +M + + + + + +L +L++ + + ++ G +F VI + V++ Sbjct: 447 VMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQ 506 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHK 390 + +++L +SE PI ++ S+G+ F TA L A A + A+ Sbjct: 507 HAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQG 566 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G+ + F P + LT ESD+ +AL +F + QP+V L+ AE L+R + Sbjct: 567 GERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVR-ADLTLIGAEALIRWR 625 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLM 509 P+ P I E GL++ +G W L E+C + +W+ G+ +P +SVN+S Q Sbjct: 626 HPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQ 685 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 +V + ++L ++P L LE+TE+ D AV LR L++ GV +++DDFG G Sbjct: 686 DQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTG 745 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++K+ PID LKID+ FV + D+++++ II LA++L ++AEGVE Sbjct: 746 YSS---LNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEI 802 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 Q ++L QGFL++RPLP F K Sbjct: 803 EQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLRTAK 838 >UniRef50_C5T6Q1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6Q1_ACIDE Length = 760 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 178/651 (27%), Positives = 295/651 (45%), Gaps = 34/651 (5%) Query: 33 HLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASI---KPAGVVSRADVVL 89 H +Q TAT A ++ +P + I + + +G +S + L Sbjct: 94 HQLQIALGQTATGAGPSAITL-DPQLALKASEAIERNVHTIDRLWDEYASGPLSAQERTL 152 Query: 90 PNQFQALRKSFIPERPVPVM---VTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSF 146 +F R ++ + PV+ T ++ +++ G +L A+P A + LQ + Sbjct: 153 AARFATRRNQYLEQAVSPVLDALRTLNYQDTRRLATGARTLYERASPDIQALVDLQFEMA 212 Query: 147 RMYKFV----MSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELV 202 + + LL S+ + + + R I+ PL+ + + I +L Sbjct: 213 HAAYAAGVQRYNKTRWMAVNALLASMAVLTVLGVMLIRSIVQPLQAVKQVFQHISDGKLD 272 Query: 203 GHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQ 262 + + DEI L+ + Q L + + + A P+++LPN+ LL E ++ Sbjct: 273 ----SAIEVRGHDEISQLLIALREMQAKLGANEKAIHHLAYYDPLTNLPNRRLLKECIQA 328 Query: 263 VVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISG 318 +A AL+++ + + L + L+ ++L+ + +A+I G Sbjct: 329 ALAASNRDDHHRALLLLDLDNFKTINDTLGHELGDAFLMDTAQRLRHAVQAPHFVARIGG 388 Query: 319 YDFAVIANGVQEPWHAIT-----LGQQVLTIMSERLPIERIQLRPHCSIGVAMF-YGDLT 372 +F V+ + + A L Q+L ++ + SIG+ +F + + T Sbjct: 389 DEFVVLVDRLPADEAAALEQVNLLADQLLAAVAGPCLLAGQWHHGSASIGICLFRHHNAT 448 Query: 373 AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQ 432 + L RA +A + A++ G+N FDP + R E+ + A+ Q + Q Q Sbjct: 449 IKDLLKRADAAMYQAKNAGRNNHCLFDPAMQAQLETRTALEAALRTAVARGQMELHFQVQ 508 Query: 433 VEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW-- 490 V + AEVLLR P P I E GL+ ++G WVL+ +C L AW Sbjct: 509 VNGA-MQATGAEVLLRWNHPTHGPVPPAQFIPIAEASGLIHSIGAWVLQRACAQLKAWDG 567 Query: 491 QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 Q L L+VN+SA Q HP+ VA + + L R PG L+LE+TES + D V Sbjct: 568 QAHTRHLELAVNVSAQQFRHPDFVAQVCDALDRAGANPGLLVLELTESLVLHDIADTVQK 627 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAI 607 + LR GVR ALDDFG GY+ L H+K LP+ LK+D FV + P D+ ++ I Sbjct: 628 MLALRRHGVRFALDDFGTGYSS---LSHLKQLPLHHLKVDGCFVRDIVTDPSDAVIVQTI 684 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 I +A++L L +IAEGVE EAQR L + QG+LF+RPLP+ FE+ Sbjct: 685 IGMARNLGLCVIAEGVEAEAQRQVLLDLQCPVYQGYLFSRPLPLAQFEQWL 735 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 161/704 (22%), Positives = 301/704 (42%), Gaps = 63/704 (8%) Query: 10 KQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPE- 68 +Q+ + + VF+ + CT+ L + + Q E +++ E ++ I D Sbjct: 346 RQVTIALLIAGVFLCLSCTLTLMIMRYKKTLQALRQSEGTLKAMLESIADPIHMVDRDLN 405 Query: 69 ---AEAILASIKPAGVVS---RADVV---LPNQFQALRKSFIPERPVPVMVTRLFELP-- 117 A I + +V A + P + F++ Sbjct: 406 ILWANDIAKQLFGKNLVGQKCYAALHRSPTPCDPMCHAIKAFSDGHAHSSENLFFDINDE 465 Query: 118 -VQISLGVYSLERPANPQPIAYLVLQAD------SFRMYKFVMSTLSTLVTIYLLLSLIL 170 + + QP A L + D + + + ++ +T L+ L Sbjct: 466 ERCFLVTANVASTDSQGQPSAVLTISRDVTEIKKTQQQFHQAKWSIDASLTPMLMADLQG 525 Query: 171 TVAIS-------WCI--------------------NRLILHPL--RNIARELNAIPAKEL 201 + + W R+I+ L R + R K Sbjct: 526 RLTYANQAALDLWGYAGEEEVLGKNIVEFQEDPQRTRIIMEILKARGVWRGEGRGKQKNG 585 Query: 202 VGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKALLMEM 259 G + L D+ G + + + E A ++ LPN+ LL + Sbjct: 586 NGFDVELQAQVVKDQNGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTLLKDH 645 Query: 260 LEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQ 315 +E + + + A++++ + + L A ++L+ ++ E+L++ LA+ Sbjct: 646 MELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLAR 705 Query: 316 ISGYDFAVIANGVQEPWHAITLGQQVLTIMSE-RLPIERIQLRPHCSIGVAMFYGDL-TA 373 G +F ++ + + + + ++ + +++E + SIG+A++ D Sbjct: 706 WGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDP 765 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 E L RA +A + A+ G+N FF Q E A++R E ++ +AL+ + + QPQ+ Sbjct: 766 ETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQI 825 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE- 492 ++ ++ E LLR Q P+ P I E GL+ +G WVL+++CR A WQ+ Sbjct: 826 DLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKT 885 Query: 493 RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILR 552 L ++VNLSA Q P++ ++ ++L + P L LE+TES +++ AA+ L Sbjct: 886 EASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALT 945 Query: 553 PLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIM 609 L+ GV+ ++DDFG GY+ L ++K LPID +KI + FV + GD ++I A I Sbjct: 946 ELKKLGVQFSIDDFGTGYSS---LSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIA 1002 Query: 610 LAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 +A+SL +++IAEGVE Q +L G QG+ FA+P+P + Sbjct: 1003 MAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 132/459 (28%), Positives = 229/459 (49%), Gaps = 16/459 (3%) Query: 214 DDEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D G + + + L+R +++ + A P++ LPN+ LL + L + + R Sbjct: 872 KDAQGKVAHYVGVFSDITELRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDE 931 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+ I + ++ L + +L + +L ++ + ++ G +F ++ Sbjct: 932 TGLAVFFIDLDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIED 991 Query: 328 VQEPWHAITLGQQVLTIM-SERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 V EP + +++L ++ + + +E + SIG+++F D AE L A A + Sbjct: 992 VGEPTAVSHIAEKILNVLQASPVTVE-HEFFVGASIGISVFPQDGADAETLMKNADVAMY 1050 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ +G+N +FF + + RL E+D+ A+E + ++LQPQ + +GK+V AE Sbjct: 1051 RAKERGRNTYEFFTKDLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEA 1110 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPL-SVNLS 504 L+R +P LP I E GL+V +G WV + A W G+ + SVN+S Sbjct: 1111 LVRWLRPQQGLVLPGEFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVS 1170 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 ++ + L + L LE+TES + +V +L LR G+ + +D Sbjct: 1171 GVEFARGRIQQTARRTLELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVID 1230 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L ++K LP++ LK+D+ FV GLP D+ ++ A+I L SL L +IAE Sbjct: 1231 DFGTGYSS---LAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAE 1287 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 GVETEAQR++L G QG+L RP+P + + +L Sbjct: 1288 GVETEAQREFLTGEGCDEMQGYLRGRPMPFDDYHARFLS 1326 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 138/506 (27%), Positives = 233/506 (46%), Gaps = 27/506 (5%) Query: 178 INRLILHPLRNIAR----ELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 R I LR +N E+ L + + D G + + Sbjct: 468 FYRNIYTSLRETGSWSGEIINRRKNGEIYPEHLTITAVKDAD--GQTTNYVGMFTDISVA 525 Query: 234 HYEEQNE--NAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 + A P+++LPN+ L + L Q + AL+ + + + L Sbjct: 526 KAASERIENLAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTL 585 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN-----GVQEPWHAITLGQQVL 342 ++LL + +L + + +A++ G +F ++ V+ +G ++L Sbjct: 586 GHDYGDMLLKQVALRLSNCVREGDSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKIL 645 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +++ ++ + SIG+++F G ++E L A A + A+ G+N ++FFDP Sbjct: 646 MSLNQPYQLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMYQAKKAGRNTLRFFDPL 705 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 E R+ E ++ A+E QF ++ Q Q+ G+ AE L+R + P+ P Sbjct: 706 MQETINMRVDLERELKKAIEQKQFELYYQVQMNSA-GQPSGAEALIRWRHPERGIISPIQ 764 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQ--ERGIMLPLSVNLSALQLMHPNMVADMLE 519 I E GL+ +G WVL ++C L AWQ + L++N+SA Q + P+ + Sbjct: 765 FIPVAEETGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSAKQFLQPDFANQVKN 824 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 + + I L LE+TES ID+ + + L G++ +LDDFG GY+ LQ++ Sbjct: 825 SIRSFHIDNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGYSS---LQYL 881 Query: 580 KSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 K LP+ LKID+ FV L D+S ++ II +A SL L +IAEGVET+ Q L G Sbjct: 882 KMLPLSQLKIDQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQLLNAHG 941 Query: 637 VGIAQGFLFARPLPIEIFEESYLEEK 662 G QG+ F+ PL I F Y++ K Sbjct: 942 CGNYQGYYFSEPLSINEFNHQYMQFK 967 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 105/281 (37%), Gaps = 35/281 (12%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 ++ +S+ + +V VL + + + + + ++LE++A+ S+ Sbjct: 15 LQPKKSIRGEIRHLVLITVLTSLSLTFIFGAIYKINNEKQAVHSELETLAKITALNSQSS 74 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPN---------QFQALRKSF---IPERPVPV 108 ++ D A+ IL S+ V A V+ + + Q L + + + Sbjct: 75 LVFNDARAAQEILQSLSARADVLDAQVLRVDGTVLAKKKFEKQTLSNDYLFVPNDALLSQ 134 Query: 109 MVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSL 168 + L P +L+ P+ + ++ D+ + ++ TL + I ++ L Sbjct: 135 LGNFLGISPSTYVTEHVTLKNT----PLGNISIRFDTSIVLHEILITLGISLIITVVALL 190 Query: 169 ILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQ 228 + + + I+ ++ P+ + I K + G ++ DDE+G+ +N Sbjct: 191 LSLLLMRRLIDHMMT-PINLLINSAKDIAKKGMYGLRVKKI---GDDELGIFTDQFNRML 246 Query: 229 QLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT 269 + +++ + E LE+ VAR+ Sbjct: 247 EEIEKRDQALLSK---------------NEQLEEEVARRTQ 272 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 133/456 (29%), Positives = 237/456 (51%), Gaps = 14/456 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 DDE G+++ + + + +R + +E A ++ L N+ LL L+Q A+ Sbjct: 373 DDEKGVVIGAVLTFRDISERLSYEQELERRAHYDELTGLANRVLLKARLQQTTAQAHRHG 432 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + + L + LL+ + ++L++V+ +A+ G +F ++ + Sbjct: 433 KSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQTVVREADTVARHGGDEFVIVLSE 492 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 A +G+++L ++E + I+ +L S+GV++F D + L A +A + Sbjct: 493 PDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVSLFPRDGTDVDTLLRNADAAMYR 552 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+H G+N +QF+ + + KRL S + A+E ++ + QPQ + G+L+ E L Sbjct: 553 AKHLGRNNLQFYSEEMNLSLSKRLRMLSQLRQAVERNELCLHYQPQASLPGGRLLGVEAL 612 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 +R Q P+ P I E GL+ +G WVL E+CR AW G L +SVNLSA Sbjct: 613 VRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQGVAWDRAGFMPLRISVNLSA 672 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q +P + + ++L + + P L LE+TE+ I +P +V L +R+ GVR+ALDD Sbjct: 673 RQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIANPQQSVQRLSAIRDLGVRLALDD 732 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L +++ D++KID+ FV PG+++++ +I +A+ L + IAEG Sbjct: 733 FGTGYSS---LAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVRTVIAMARLLGSETIAEG 789 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 ET +L + G QG+ +RPLP E+ + Sbjct: 790 AETAETITFLGRNGCDAVQGYYISRPLPAGEIEQLF 825 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 142/474 (29%), Positives = 245/474 (51%), Gaps = 23/474 (4%) Query: 199 KELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALL 256 EL L++ + + D G + R + ++ +++ E A +++LPN+ L Sbjct: 569 GELHAKWLSISVIRRAD--GSIYRHVGQFSDITEKKRKDELIWEQANFDTLTNLPNRRLF 626 Query: 257 MEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 + Q + + AL+ + + + + + LL+ + +L S + Sbjct: 627 ADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDT 686 Query: 313 LAQISGYDFAVIANGVQEPWH-----AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F VI NG+ + A + +++ + +++ + SIG+ +F Sbjct: 687 VARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLF 746 Query: 368 YGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 G E+L + +A + ++ KG+N I FFD E +KR E+ + ALE +F Sbjct: 747 RGHSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQEILEKRGQLETALRGALERKEFL 806 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + Q Q++ +SG+ + AE LLR P I E GL++ +GHWVLE +C Sbjct: 807 LHYQLQMD-SSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETACAQ 865 Query: 487 LAAWQERGI--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 LA WQ L ++VN+SA+Q VA + +L + IQP L LE+TES +DD Sbjct: 866 LARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLDDI 925 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDS 601 + ++ + L+N GV+ ++DDFG GY+ L ++ LP+D LKID+ FV + D+ Sbjct: 926 NDSILKMEALKNLGVKFSMDDFGTGYSS---LSYLSRLPLDQLKIDQSFVRDITTDQHDA 982 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 +++ II +A SL +++IAEGVETE QR++L G QG+L+A+P+PIE E Sbjct: 983 AIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEELE 1036 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 136/466 (29%), Positives = 241/466 (51%), Gaps = 17/466 (3%) Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQRH----YEEQNENAMR-FPVSDLPNKALLMEMLE 261 L R QDD G+ + ++++ + Q+ E Q E + ++ LP + ++L Sbjct: 237 TLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHYDTLTGLPQRDFFFDLLH 296 Query: 262 QVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQIS 317 + +T AL+ + + ++ L + +L + ++L++ + L+++S Sbjct: 297 SHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVAQRLQNNIRITDNLSRMS 356 Query: 318 GYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQL 376 G +F + + L Q+ L+++S + IE + SIG+++F GD T E+L Sbjct: 357 GDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEKL 416 Query: 377 YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMT 436 S A SA + A+ G++ +F+ P E AQ L E+++ A+E Q + QPQ ++ Sbjct: 417 LSCADSAMYRAKESGRDAFRFYKPHMNEKAQGLLWLETELRLAIEQEQLELHYQPQYDLN 476 Query: 437 SGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI- 495 +G+LV E L+R P+ P I + E L++ +G WVL +CR +AAW GI Sbjct: 477 TGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGIS 536 Query: 496 MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 + ++VN+SA+Q ++ + +LL Y + L LE+TES +DD AA + L Sbjct: 537 PIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNKLT 596 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQ 612 G+++++DDFG GY+ L ++K PI LKID+ F+ + D+++ +II LA Sbjct: 597 AMGIQLSIDDFGTGYSS---LSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAG 653 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 + ++++AEGVET Q +L + QG+LF RPLP + E Sbjct: 654 HMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKDIERQL 699 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 127/467 (27%), Positives = 228/467 (48%), Gaps = 26/467 (5%) Query: 215 DEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 DE G V Q + +R E+ A ++ LPN+ ++ LEQ + Sbjct: 237 DEQGEAVCLTGTIQDITERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDR 296 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQ------------I 316 A++ + + + L + LL + ++L + LA+ + Sbjct: 297 MLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRL 356 Query: 317 SGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQ 375 G +F ++ + ++ + +++L +S +E ++ SIG++++ D T A Sbjct: 357 GGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASD 416 Query: 376 LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEM 435 L A A + A+ +G+N Q +D A +R+ ES + AL+ +F ++ QPQV Sbjct: 417 LIRNADGAMYQAKEQGRNGYQIYDESMNAKALERIILESQLHKALKEEEFIVYYQPQVSN 476 Query: 436 TSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI 495 SG++V E L+R + P + E GL++ + WV+ E+CR W + G Sbjct: 477 QSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGF 536 Query: 496 -MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPL 554 + L++N+S Q M ++ + +L + PG L LE+TE + V L+ L Sbjct: 537 PPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQAL 596 Query: 555 RNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLA 611 + GVR+A+DDFG G++ L ++K P+DVLKID+ F+ + P D+++ A I +A Sbjct: 597 KGMGVRLAIDDFGTGFSS---LSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMA 653 Query: 612 QSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 ++ L++IAEGVET+ Q D+L K G + QG+LF++P+P + Sbjct: 654 HTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTELPRLF 700 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 140/463 (30%), Positives = 236/463 (50%), Gaps = 14/463 (3%) Query: 210 RLHQDDEIGMLVRSYNLNQQLLQ-RHYEEQNENAMR-FPVSDLPNKALLMEM----LEQV 263 R+ + G L R Q + R E + R P++ L N++ + L Sbjct: 629 RIEGEHVGGRLRRIRGTAQDVTALREAEARIRYLARFDPLTGLLNRSAWQDHAQDVLRHA 688 Query: 264 VARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAV 323 A++ + + + L A + LL + +L + ++A+I G +F + Sbjct: 689 ARHDDRCAVLFLDLDDFKTVNDSLGHAAGDRLLAQVACRLGGCVRAEDLVARIGGDEFVI 748 Query: 324 IANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAIS 382 + + + + ++VL ++ L I+ LR SIG+A++ D + L A + Sbjct: 749 LLSRLAHAEEPARVAERVLDALARPLQIDSQPLRVGASIGIALYPADGGEIDTLLKHADT 808 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVS 442 A + A+ G+N +FF P+ + +RL E+++ A+E+ + QPQ++ SG++ Sbjct: 809 AMYEAKESGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQIDAASGRVYG 868 Query: 443 AEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSV 501 E L+R Q P+ PD + E GL+V +G WVL E+C W++ G+ L ++V Sbjct: 869 CEALVRWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGLPPLDVAV 928 Query: 502 NLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRV 561 N+SALQ + VA + +L P + LE+TES +D VA L G+ + Sbjct: 929 NISALQFRRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQLVALGLTL 988 Query: 562 ALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQM 618 ALDDFG GY+ L ++K LP+ LKID+ FV+GLP D+++ +A + LA+ L +++ Sbjct: 989 ALDDFGTGYSS---LSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEV 1045 Query: 619 IAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +AEGVETE QR +L K G QG+LF+RPL +E F + E+ Sbjct: 1046 VAEGVETEDQRGYLCKRGCRAMQGYLFSRPLGVEEFGTWFEEQ 1088 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 128/475 (26%), Positives = 246/475 (51%), Gaps = 17/475 (3%) Query: 199 KELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALL 256 ++ + + + + D G ++ + + + + QR ++ A ++ LPN+ LL Sbjct: 236 RKPIDVSVTISAM--KDRAGNIIGASKIVRDITQRKESQERIEYLAHYDSLTGLPNRTLL 293 Query: 257 MEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 + L + + AL+ + + + L + LL + ++++S + Sbjct: 294 SDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADT 353 Query: 313 LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL- 371 ++++ G +F V+ + ++ A ++++T +S+ IE +L SIG++++ + Sbjct: 354 VSRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNGK 413 Query: 372 TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 A L A +A ++A+ +G+N+ QF+ AA +RL E D+ AL + QP Sbjct: 414 DASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQP 473 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ 491 Q+E+ +G+++ E L+R + P I E GL++ +G ++L ++C W Sbjct: 474 QIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQWH 533 Query: 492 E-RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 E +G ++VN+SA+Q + +L +L+ P L LEVTES + + V Sbjct: 534 EHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVVQK 593 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAI 607 + L + G+++A+DDFG GY+ L +++ ID LKID+ FV LPGD+ ++I AI Sbjct: 594 MGILESHGIKLAIDDFGTGYSS---LSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAI 650 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 + + +SL L+++AEGVETEAQ +L +QG+L+ARP+ FE ++L+ + Sbjct: 651 VAMGRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFE-AWLKTR 704 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 139/463 (30%), Positives = 245/463 (52%), Gaps = 19/463 (4%) Query: 210 RLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT 269 + + E+ ++ + + + EE N+ A ++ LPN+ LL++ L +A Sbjct: 126 KAKRAAELAIVNQDLTFQSKEKAKLAEELNDLAFYDTLTGLPNRRLLIDRLHHALASNVR 185 Query: 270 ----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIA 325 +A+M I + +D L ++LL+ ++L+S L +A++ G +F +I Sbjct: 186 QGCESAVMFIDLDHFKDINDTLGHEVGDLLLIQTAQRLESCLRKGDTVARLGGDEFMLIL 245 Query: 326 NGVQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSR 379 + E A + ++L +++ ++ + SIG F + TAE L + Sbjct: 246 ENLDENPIEAATKAKAIADKILAELNKPYQLDMHKCHSTVSIGAVFFDHQGNTAEDLIKQ 305 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A A + A+ G N I+FF+P+ E+ R+T E+++ A+E QF ++ Q Q++ + + Sbjct: 306 ADIAMYQAKQAGGNLIRFFNPKMQESINARITLENELRIAIEKSQFHLYYQIQMD-SDNR 364 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE--RGIML 497 ++ AE L+R P+ LP I E GL++++G WV+E +C + WQ+ + L Sbjct: 365 VLGAEALIRWTNPEHGLVLPATFIPIAEETGLILSIGKWVIETACAQIKVWQKKSQTRDL 424 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 L+VN+SA Q + V + + R+ I L LE+TES D +A+++ L Sbjct: 425 TLAVNVSAKQFRQKDFVDQVQSAVQRHAIPGNLLKLELTESLLQYDTEVTIAMMKALNKI 484 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSL 614 GV+ +LDDFG GY+ LQ++K LP+D KID+ FV + D +++ AII +AQ L Sbjct: 485 GVQFSLDDFGTGYSS---LQYLKRLPLDQFKIDQSFVRDIATDNNDKAIVKAIIAMAQIL 541 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 ++ +IAEGVETE Q+ L G + QG+LF++P+PI+ F+ Sbjct: 542 DIDVIAEGVETEEQQQLLLGKGCTLYQGYLFSKPIPIDQFDAL 584 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 140/481 (29%), Positives = 234/481 (48%), Gaps = 18/481 (3%) Query: 192 ELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSD 249 E N H + P + D G + R L + +R EE A ++ Sbjct: 144 EQNDFLHDGRHYHLVGTPLKNHD---GAISRVVLLYTDITERRAAAEEIERLAFFDSLTG 200 Query: 250 LPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS 305 LPN+ LL + L Q++ R A++ I + ++ L + LL + E+L + Sbjct: 201 LPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKEVNDTLGHGTGDQLLQVVSERLTA 260 Query: 306 VLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 L +A++ G +F V+ G+ E + ++L + + + ++ ++ SIG++ Sbjct: 261 CLRSCDTVARLGGDEFVVLLPGITERDCVGDIAAKLLQSLCKPVQLDAREVFTSGSIGIS 320 Query: 366 MFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 ++ D + L+ A +A + A+ +G+N +F+ PQ + ++LT +D+ ALE + Sbjct: 321 LWPIDGDSVSTLFKNADTAMYHAKEQGRNTYRFYTPQMHATSMEQLTLSNDLRYALERGE 380 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 + QPQV +G L+ E LLR P PD I E GL+V +G WVL E+C Sbjct: 381 LHLCYQPQVSFETGGLIGVEALLRWIHPKLGMIPPDRFIPLAEDTGLIVPIGTWVLHEAC 440 Query: 485 RLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 R W +G+ L ++VN+SA Q + + +L + P L LE+TE I++ Sbjct: 441 RQAMMWVAQGLPSLRVAVNISAKQFRESDFSDTVKAVLQTTGLAPNLLELELTEGMLIEN 500 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSM 603 L+ L++ GV +A+DDFG GY+ L ++K P+D LKIDK FV+ + S Sbjct: 501 VTQTKLTLQSLKDMGVTLAIDDFGTGYSS---LSYLKHFPLDRLKIDKSFVKEIAEKSGD 557 Query: 604 ----IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 + A++ L SL L +IAEGVE + Q D+L QG+ F+RPL + EE Sbjct: 558 AAAIVEAVVALGHSLKLTVIAEGVEQQDQVDFLHNRKCDELQGYFFSRPLTPQALEELLR 617 Query: 660 E 660 + Sbjct: 618 K 618 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 248/492 (50%), Gaps = 23/492 (4%) Query: 187 RNIARELNAIPAKELVGHQLALPRLHQD-DEIGMLVRSYNLNQQLLQRHYEEQNENAMRF 245 + + + ++ G ++ + +D E+ + L+ + A Sbjct: 223 KELCNHIRLTAERDSSGRLTSVLAIGRDITELYESRAALKRANAQLENMNDLLQSQATSD 282 Query: 246 PVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN+ +++ L+ +A AL+ I + + L + LL + Sbjct: 283 PLTGLPNRRFMLDRLKHALASSSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAH 342 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQL 356 +L++ + +A++ G +F V+ + E +G+++L +++ + + + Sbjct: 343 RLETCVREGDTVARLGGDEFVVMLEDLSEKDLEAAAQTEAVGEKILAALNQPYQLGKHEY 402 Query: 357 RPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 R SIG +F + ++L +A A + A+ G+N ++FFDPQ E R T E++ Sbjct: 403 RNTPSIGATLFNDHQQSLDELLKQADIAMYQAKRAGRNALRFFDPQMQETINSRATLENE 462 Query: 416 ILNALENHQFAIWLQPQVEM----TSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGL 471 + ALE HQF ++ Q QV+ S + AE L+R P+ P I E GL Sbjct: 463 LRKALELHQFYLFYQVQVDSVQEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAEETGL 522 Query: 472 MVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPG 529 +V +G WVL+ +C L WQ + L L+VN+SA Q P+ VA + + R+ I P Sbjct: 523 IVPIGLWVLDTACAQLKTWQHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGIDPK 582 Query: 530 TLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKI 589 L LE+TES +++ +A + LR G+R +LDDFG GY+ LQ++K LP+D LKI Sbjct: 583 LLKLELTESLLLENIQDTIATMNALREIGIRFSLDDFGTGYSS---LQYLKQLPLDQLKI 639 Query: 590 DKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFA 646 D+ F+ L D +++ II +AQSLNL +IAEGVETEAQR L + G QG+LF+ Sbjct: 640 DQSFICDLVSDSSDRAIVRTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHHQGYLFS 699 Query: 647 RPLPIEIFEESY 658 +P+PI FE Sbjct: 700 KPVPINQFEAQL 711 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 140/459 (30%), Positives = 242/459 (52%), Gaps = 15/459 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT-T 270 DE+G + ++ + R E A P++ LPN+A + E L++++A++++ Sbjct: 943 KDEMGQIQSHIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQMHEALDRLMAKEESQL 1002 Query: 271 ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE 330 AL+ I + + + + +L + +LK + + ++++I G +F VI + E Sbjct: 1003 ALLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLVSRIGGDEFTVIMATLPE 1062 Query: 331 PWHAIT----LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 AI + +++L M + IE QL S+G+A++ + + L A +A + Sbjct: 1063 TEQAIQTIIDVSERILHQMMQPFFIEDRQLYLSASVGIALYPENALSGTDLLRNADTAMY 1122 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ GKN QF+ + E A +RL E+++ AL+ +F + Q Q ++ + E Sbjct: 1123 HAKAMGKNNFQFYAEEMNEKAMERLELENNLHLALQRDEFELTFQAQWDIKHNCICGVET 1182 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLS 504 LLR +PD PD I IE GL+V +G WVL +C + WQE G ++P L+VNLS Sbjct: 1183 LLRWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIMDWQEAGYVIPKLAVNLS 1242 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 A Q M+ + ++ + P + LE+TES +DD +A+L R G +++D Sbjct: 1243 ARQFKDAQMLDRICRIVDETGVDPELIELELTESILMDDIDRTLAVLNEARKMGFGLSID 1302 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L ++K P+ LKIDK F++ LP D + I+ +A +L L +IAE Sbjct: 1303 DFGTGYSS---LSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTIVAMANNLGLGVIAE 1359 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 GVE E+QR +L G QG++++ P+P ++F + +LE Sbjct: 1360 GVENESQRQFLKTIGCYQVQGYMYSHPVPADLFAQDFLE 1398 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 148/480 (30%), Positives = 246/480 (51%), Gaps = 14/480 (2%) Query: 189 IARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVS 248 ++RE + L H++A P + + I M + + +R + + A ++ Sbjct: 292 LSRERKVLGTFALYAHEVATPCEQEQELIAMAAHLAGIAIER-KRAEDRISFLAHHDALT 350 Query: 249 DLPNKALLMEM----LEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLK 304 LPN+ L E LE++ R Q L + + + L A + LL + +++ Sbjct: 351 GLPNRVLFEEQVDGMLEEIRERDQCAVLAFLDLDNFKLINDSLGHAAGDELLKAVAGRMR 410 Query: 305 SVLSPRMILAQISGYDFAVIANGVQEPWHAI-TLGQQVLTIMSERLPIERIQLRPHCSIG 363 + + + ++ G +F ++ NG+ + + + + + + ++ L ++ L+ CS+G Sbjct: 411 ASVRKADFVVRVGGDEFIILLNGLPKERDIVLSRLEDIRSAIAMPLQLQGRSLQVSCSMG 470 Query: 364 VAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALEN 422 VA F TA +L + A A + A+ G++ IQ F + A +RL + ++ AL Sbjct: 471 VACFPNQGRTAGELLANADMAMYRAKELGRDNIQVFTEEMAARAHERLQWQEELREALAG 530 Query: 423 HQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEE 482 +F + QPQ+ + +G++ +AE LLR P P I E GL+V +G W L Sbjct: 531 EEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRA 590 Query: 483 SCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 +CR L AWQ+ G+ L +SVN+SA Q N + + E+L ++ L LE+TES + Sbjct: 591 ACRQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKETGLEARYLELELTESLIM 650 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP--- 598 D A+A + L GV +A+DDFG GY+ L +K P+ LKID+ FV +P Sbjct: 651 QDVPGAIATMHALEAIGVHLAIDDFGTGYSS---LSALKRFPVRRLKIDRSFVTDIPLDA 707 Query: 599 GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 D ++ +AII LAQ L L++IAEGVE+EAQ ++L KAG QG+ F+RPL E FE Sbjct: 708 DDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFESLL 767 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 140/482 (29%), Positives = 243/482 (50%), Gaps = 23/482 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N E+ +LA+ + D G+++ + +E A P++ LP Sbjct: 652 NKRKNGEVYPERLAITAV--KDARGVVINYVASLSDITLHKAAEDEIRSLAFFDPLTGLP 709 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LLM+ L+Q + + AL+ + + ++ L ++LL + ++LK+ + Sbjct: 710 NRRLLMDRLQQALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCV 769 Query: 308 SPRMILAQISGYDFAVIANG-----VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +A+I G +F V+ ++ +G ++++ +++ +E+ ++ SI Sbjct: 770 REGDTVARIGGDEFVVMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFEVHSTPSI 829 Query: 363 GVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G +F + L+ +A A + A+ G+N ++FFDPQ + R E+D+ ++E Sbjct: 830 GATLFDSRPQIIDDLFKQADIAMYQAKKAGRNTMRFFDPQMQDTLNTRTALEADLRKSIE 889 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +F ++ Q QV+ + V AE L+R P P I E L++ +G WVL+ Sbjct: 890 RREFNLFYQIQVD-EMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQ 948 Query: 482 ESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 E+C L WQ + L L+VN+SA Q + + + +Y I P L LE+TES Sbjct: 949 EACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESM 1008 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP- 598 ++ + I+ L+ GV+ +LDDFG GY+ LQ++K LP++ LKID+ FV L Sbjct: 1009 LQENIEDTILIMNALKEIGVQFSLDDFGTGYSS---LQYIKKLPLNQLKIDQSFVHDLDF 1065 Query: 599 --GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D +++ AII +A+SL L +IAEGVET+ QR L G QG+LF++PLPI F+ Sbjct: 1066 DRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIREFDA 1125 Query: 657 SY 658 Sbjct: 1126 LL 1127 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 128/443 (28%), Positives = 242/443 (54%), Gaps = 12/443 (2%) Query: 216 EIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TA 271 ++G + +Y Q+ LQ+ + + A P++DLPN+ L ++ L Q + + Q A Sbjct: 435 QLGHEITNYLDIQEQLQQQKNDLDFIAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVA 494 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 L+ I + ++ A +++L+ ++LK + +A++ G +F ++ + ++ Sbjct: 495 LLFIDLDRFKEINDSFGHASGDLVLIECGKRLKKAIREIDTVARLGGDEFTILIDELKTN 554 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHK 390 I + ++++ +S+ + + SIG+++F D A QL A +A + A+ Sbjct: 555 NVIINVVKKIIKTLSDPIFVNENIFHITASIGISIFPNDGTDANQLLQNADAAMYQAKED 614 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 GKN F+ + E A RL E+++ +AL+N QF ++ QPQV++T+ K+V E L+R Sbjct: 615 GKNTYHFYTKEMTEQAYNRLLMENNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWN 674 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLM 509 PD I E GL++ +G ++ + + ++ W + + +++N+SA QL Sbjct: 675 HEQKGIIPPDHFIPLAEETGLIIPLGKQIIAMASQTISEWHQANLTNARIAINVSAKQLR 734 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 ++ L + QP + +E+TES + +P A+ +L LR G+ +++DDFG G Sbjct: 735 DSRFFHNLNTALNKNNCQPDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTG 794 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++K LPI +KID+ FV LP D+ + AII ++QSLNL +IAEG+ET+ Sbjct: 795 YSS---LAYLKKLPITKVKIDRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQ 851 Query: 627 AQRDWLAKAGVGIAQGFLFARPL 649 Q++++ + G + QG+ ++RPL Sbjct: 852 EQQNFVLQEGCKLIQGYYYSRPL 874 >UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U286_MARAV Length = 692 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 172/671 (25%), Positives = 308/671 (45%), Gaps = 24/671 (3%) Query: 3 VSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAIL 62 V L + + V V L+ + V + ++ V + + A+ Sbjct: 13 VENHLGYRILRWVLLVALLSGILMSAVQVVLDAKRVSAELERDAAQTLAMVEDSATQAVF 72 Query: 63 KGDIPEAEAILASIKPAGVVSRADVVLPN-QFQALRKSFIPERPVPVMVTRLFELPVQIS 121 D A+ ++ + + A + P+ R + + P + +F + Sbjct: 73 SIDDTLAQQVVDGLFALEPIHMAKITHPDGDELGDRLRPLQDSPFRPLTDPIFGQVREYR 132 Query: 122 LGVYSLERPANPQPI-AYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR 180 SL R +NP + YL + D+ + + + L+LIL + + + Sbjct: 133 E---SLTRGSNPDLVYGYLEVHYDTAPYARTWLGRALVTFASGIALALILGIVLFVVFHL 189 Query: 181 LILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQ----QLLQRHYE 236 L+ PL I + + + +++P H+ DE+G+ V + N ++H E Sbjct: 190 LLTRPLLRIVQSVKKVDPAHPDDRLVSIPEGHRADELGLWVNATNNLLVAIGDTQKKHRE 249 Query: 237 EQ---NENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKE 289 + A ++ LP++ ME L+ + R Q + ALM+ + + Sbjct: 250 AEDRVTRLARYDTLTGLPSRDAFMEDLQGAIERAQEGHSSIALMVCGIDDFKSVNEQCGF 309 Query: 290 AQREILLLTLVEKLKSVLSPRMI-LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 + +L T+ +L + LS +A++ F ++ +++ + A ++VL + Sbjct: 310 RTGDTILQTVASRLTANLSSDRFNVARLGSDQFVIVEKHLRDGFQAAETAEKVLATIGSP 369 Query: 349 LPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + ++ ++G+++F D A++L A A+ G N QF+ + + Sbjct: 370 INSGNHRISMTATLGISLFPSDADQADRLLQSAEQTMALAKQTGHNHFQFYVASIDKEIR 429 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +R E D+ AL NH+F + QPQ+ + + +++ AE LLR + P+ PD I E Sbjct: 430 ERKQMEKDLAQALANHEFHLVYQPQINLETRRVIGAEALLRWEHPEHGMIPPDLFIPVAE 489 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 G +V +G WVL+++C A W G L ++VNLSA+QL ++V D+L L R+ I Sbjct: 490 ANGSIVEIGQWVLDQACWQAARWASEGTHLRIAVNLSAVQLRQESIVDDILNTLKRHNIP 549 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 G L LEVTE+ + + AVA L L AG+ +A+DDFG GY+ L ++K +P+ L Sbjct: 550 AGRLELEVTETSFMTNLTDAVAKLHRLHRAGISIAVDDFGTGYSS---LTYLKQMPVQHL 606 Query: 588 KIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFL 644 KIDK F+ L D+ + II L +SLNL ++AEGVET Q +L++ G +AQG+ Sbjct: 607 KIDKQFIRDLLINEEDTRIANTIIDLGKSLNLTVVAEGVETAEQEYYLSQRGCALAQGYF 666 Query: 645 FARPLPIEIFE 655 F++PL F Sbjct: 667 FSKPLLPRDFA 677 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 134/466 (28%), Positives = 233/466 (50%), Gaps = 21/466 (4%) Query: 205 QLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV 264 + L + D + + ++ ++ ++ E A P++ LPN+ LLM+ L+ + Sbjct: 666 DVLLSSMKLDGRVVLQATVRDITER--KKSESEIVRLAFYDPLTGLPNRRLLMDRLQHAL 723 Query: 265 ARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 + A++ I + + A ++LL+ + ++LK + +A++ G + Sbjct: 724 TSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARLGGDE 783 Query: 321 FAVIANGVQEPW-----HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AE 374 F V+ + + H + +++L ++ ++ + SIGVA+F D + + Sbjct: 784 FVVLLDNLSHGHDNAGAHTKRVAEKILQALNLSYMLQGYEYHSSPSIGVALFCADASSPD 843 Query: 375 QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVE 434 +L RA SA + ++ G+N ++F+D + R E + +ALE Q ++ Q QV Sbjct: 844 ELLKRADSAMYQSKAAGRNTVRFYDERTQALLLARAELEHALHHALEQQQLMLYYQVQVN 903 Query: 435 MTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG 494 + V AEVLLR P P I E G+++ +G+WVLE++C L W Sbjct: 904 -ADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASDV 962 Query: 495 I--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILR 552 L L+VN+S Q + + L+T I P L LE+TES + D +A ++ Sbjct: 963 FKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENIIATMQ 1022 Query: 553 PLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIM 609 L+ G+ ++DDFG GY+ L +K LP+D LKID+ FV + D +++ II Sbjct: 1023 QLKKIGLNFSMDDFGTGYSSLSS---IKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIA 1079 Query: 610 LAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 +AQS+ L +IAEG+ETE QR LA G QG+LF++P+P+ FE Sbjct: 1080 MAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSDFE 1125 Score = 43.9 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 11/128 (8%) Query: 138 YLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIP 197 LV++ ++F + + + + + L+LS + NR I+HPL+ + + I Sbjct: 303 TLVVEQEAFEILWPMWVMFAEQLAMLLVLSAVSIWLYLRLQNRAIIHPLKQLQNAIEEIE 362 Query: 198 AKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLM 257 + + + +DE G L ++N L R Y+ + + + Sbjct: 363 RTQDFTRPIEITS---EDEFGELANAFNRMSHHLDRVYQNLEQRVTE--------RTQEL 411 Query: 258 EMLEQVVA 265 E+L Q + Sbjct: 412 EILNQQIR 419 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 128/435 (29%), Positives = 224/435 (51%), Gaps = 12/435 (2%) Query: 228 QQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDT 283 + L H ++ + A P++ LPN+ E+LE V + +L+ I + ++ Sbjct: 639 DEALAEHRKQLSYLAFHDPLTQLPNRLRFTEVLEAAVGDAEGHGRYLSLLFIDLDRFKNI 698 Query: 284 AGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLT 343 L + + LL + + S++ +LA++ G +FA++ P Q+V+ Sbjct: 699 NDSLGHSIGDKLLQAVARRTGSLIDSADVLARLGGDEFAILLFNCVTPVVGADTAQRVID 758 Query: 344 IMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQ 402 +S+ I+ L SIG+ + D ++L A A F A+ G+N +F++ Sbjct: 759 ALSQPFQIDDYSLHVSASIGITVAPVDAREPDELIKCADIAMFKAKDAGRNTYKFYERSM 818 Query: 403 MEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGL 462 + L E+D+ +AL Q ++ QPQ+++ S +V E LLR P+ P Sbjct: 819 NLKTHELLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEF 878 Query: 463 IDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELL 521 I E GL+V++G W+L +CR + W E G L ++VN+SA Q H ++V + ++L Sbjct: 879 IPLAEETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVL 938 Query: 522 TRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKS 581 + + L LE+TES + D +++ + L+ GVR+A+DDFG GY+ L ++K Sbjct: 939 EQTGVPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSS---LSYLKK 995 Query: 582 LPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVG 638 PI LKIDK FV+ L D+++ + + LA ++L ++AEG+E + Q D+L + G Sbjct: 996 FPICSLKIDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQ 1055 Query: 639 IAQGFLFARPLPIEI 653 QG+L +RPLP+ Sbjct: 1056 FGQGYLISRPLPVAQ 1070 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 138/448 (30%), Positives = 219/448 (48%), Gaps = 14/448 (3%) Query: 226 LNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCET 279 L + + QR E+ A ++ LPN+ALLM+ LEQ++ + + L+ + + Sbjct: 283 LMEDVTQRKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDR 342 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 + + A + LL+ + +L+ L LA+I G +F V+ + L Q Sbjct: 343 FKVINDTMGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQ 402 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFF 398 ++ ++ PI + SIG+A F D L A A + A+ G F+ Sbjct: 403 HLIDSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKEGGGKGYHFY 462 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 P+ A R+ E+++ +ALE +F + QP V G+LV AE LLR P+ + Sbjct: 463 SPEMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIM 522 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADM 517 PD I E G +V +G WVL +CR + W+E G+ +SVN+S Q N + Sbjct: 523 PDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTV 582 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 ++ + P L LE+TE+ + D A L L+ + + +DDFG GY+ L Sbjct: 583 CSIIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSS---LG 639 Query: 578 HMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 +++ PID +KID+ F+ L D +++ AII +A L LQ++AEGVET Q D+L + Sbjct: 640 YLQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKE 699 Query: 635 AGVGIAQGFLFARPLPIEIFEESYLEEK 662 G QGF F RPL E+F+ E K Sbjct: 700 QGCHEIQGFYFHRPLSEELFKTLLWEIK 727 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 131/441 (29%), Positives = 238/441 (53%), Gaps = 12/441 (2%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGV 286 L+ E+ + A+ ++ LPN+ LL + ++Q + + ++ + + + Sbjct: 253 LKAANEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDGAFSVFFLDVDRFKPINDS 312 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + + +L + +L + P +A+I G +F ++ ++P + +++ ++ Sbjct: 313 LGHSTGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQKDPGKVHEIARKIRDCVA 372 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 E + ++ L SIG+++F D T L + A SA + A+ KG QIQF+ + ++ Sbjct: 373 ENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYAKSKGSGQIQFYSGELNDS 432 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 A R+ E+D+ +E +F ++ QP+V + +G++ S E L+R P+ P I R Sbjct: 433 AALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIPR 492 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRY 524 E GL++ +G W+++ +CR WQ+ G L ++VNLSALQ ++ +++ ++L+ L Sbjct: 493 AEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEILDALESS 552 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + P L LE+TES ++DP A+ L +R GV VA+DDFG GY+ ++K P+ Sbjct: 553 GLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSF---SYLKKFPL 609 Query: 585 DVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 D LKID+ F+ + P D++++ II L +LNL++IAEGVE++AQ + L Q Sbjct: 610 DRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQ 669 Query: 642 GFLFARPLPIEIFEESYLEEK 662 GF +RPLP E E + Sbjct: 670 GFFNSRPLPPGELAERLKEMR 690 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 141/458 (30%), Positives = 231/458 (50%), Gaps = 21/458 (4%) Query: 215 DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQ 268 D+ G + + + + +R E A ++ LPN+ LL + L+QV+A ++ Sbjct: 575 DDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRSRR 634 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ I + ++ Q ++LL + ++L + +A++ G DF V+ + Sbjct: 635 HGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQDL 694 Query: 329 QE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAIS 382 E A +GQ++L + + P S+GVA+F E+L RA Sbjct: 695 SEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVALFNASQDTVEELLKRADL 754 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVS 442 A + A+ G+N ++FFDP R E+D+ L+ +QF ++ QPQV G+L+ Sbjct: 755 ALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRLGLQENQFLLYYQPQVNHA-GRLIG 813 Query: 443 AEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLS 500 E L+R Q P P I E GL++ +G WV+E +CR L W+ + L ++ Sbjct: 814 VEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIA 873 Query: 501 VNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVR 560 VN+SALQ + V+D+L L R L LE+TES + D +A + L+ GV Sbjct: 874 VNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVG 933 Query: 561 VALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQ 617 +LDDFG GY+ L ++K LP+D +KID+ FV P D++++ A + + + L + Sbjct: 934 FSLDDFGTGYSS---LSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGMM 990 Query: 618 MIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 +IAEGVET+ QRD+L G QG+ F RP+P+ Sbjct: 991 VIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAELA 1028 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 141/453 (31%), Positives = 229/453 (50%), Gaps = 14/453 (3%) Query: 213 QDDEIGM--LVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR---- 266 + E G L+ L+ + E + ++ LPN++LL + L Q +A+ Sbjct: 246 ERGEDGRAWLISGTVLDITARIKAESEIHHLINYDTLTGLPNRSLLHDRLRQAIAQAAQD 305 Query: 267 KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN 326 + ++ + + + L + LL + +L + + LA++ G +F V+ + Sbjct: 306 RHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVARRLAACVRESDTLARLGGDEFVVVLD 365 Query: 327 GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 GV A + +++LT+++E +PI+ +L SIG+A + D L A A + Sbjct: 366 GVVSEKGASIVAKKILTLIAEPIPIDDHELYTTASIGIAAYPMDGEDGHTLLKHADLAMY 425 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ +N FF +R+ E+ + ALE +F + QPQV+ SG++ E Sbjct: 426 KAKELDRNNFHFFSHDMNIKVMERMMLENSMRKALERDEFFLVYQPQVDARSGRITGVEA 485 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLS 504 LLR PD PD I E G +V +G WVL +CR AWQ+ G L ++VNLS Sbjct: 486 LLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWVLMTACRQNRAWQKLGFPPLRVAVNLS 545 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 Q + + +L ++P L LE+TES + + +AILR L+ G+ +A+D Sbjct: 546 GKQFGQHRLDEMISAILLETGLEPEWLELEITESAIMRNADQNIAILRSLKEKGISLAID 605 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L ++K PI LKIDK FV+ + P D+++ II +AQ+L L +IAE Sbjct: 606 DFGTGYSS---LSYLKHFPITRLKIDKTFVQDITTNPDDAAIAEIIIAMAQTLKLNVIAE 662 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 GVET AQ ++L+ QG+LF+RPL + F Sbjct: 663 GVETRAQMEFLSTHTCFEMQGYLFSRPLTTDKF 695 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 136/459 (29%), Positives = 236/459 (51%), Gaps = 21/459 (4%) Query: 213 QDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQ 268 +++ + M+ Y + ++ ++ E A P++ LPN+ LL + L+Q +A K Sbjct: 359 EENPLRMVGGFYEVTER--KKAEEAIQNLAFYDPLTQLPNRRLLQDRLQQEMAVTERSKH 416 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 ALM I + + L + LL + +L+ + +A+I G +F +I + Sbjct: 417 VCALMFIDLDDFKTLNDTLGHDTGDKLLRQVATRLRENVREFDTVARIGGDEFVLILPSL 476 Query: 329 QE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAIS 382 + HA + Q+VL ++++ ++ SIGV +F G T E+L A Sbjct: 477 DDDWKDAATHAELVAQKVLRVLNKPYLLDSTPYHSTPSIGVKLFSGHQETLEELLKHADL 536 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVS 442 A + A+ KG+N ++F+D E + E+ + A+ QF ++ QPQ+ ++G+++ Sbjct: 537 AMYQAKAKGRNTVRFYDTTMQEVVNAKSVMEASMRQAITGQQFVLFYQPQIN-SNGQIIG 595 Query: 443 AEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPLS 500 AE L+R + P P+ I E G ++++G WVL+ +C L W Q + ++ Sbjct: 596 AEALVRWRHPQKGLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQPATAQITMA 655 Query: 501 VNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVR 560 VN+SA Q ++V ++ ++ + P L LE+TES + D V ++ L+ GV Sbjct: 656 VNVSARQFHQIDLVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVS 715 Query: 561 VALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQ 617 +LDDFG GY+ L ++K LP+D LKID+ FV + D+++ A+I LA+S+ Sbjct: 716 FSLDDFGTGYSS---LAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFN 772 Query: 618 MIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 +IAEGVE Q L G + QG+LF RP+PIE F + Sbjct: 773 VIAEGVENIEQHQMLIDMGCRVFQGYLFGRPVPIEEFFQ 811 Score = 41.9 bits (98), Expect = 0.085, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 86/269 (31%), Gaps = 29/269 (10%) Query: 10 KQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTA-TQLESIARSVREPLSSAILKGDIPE 68 +Q+ + VV+ + + Q Q + +A++V + + D Sbjct: 18 RQLVVGMVVVVSTLLAIFIWEVTREQQNVMQELKIDQAKGLAQNVATSTAVWVASRDFSG 77 Query: 69 AEAILASIKPAGVVSRA-------DVVLPNQFQALRKSFIPERPVPVMVTR-LFELPVQI 120 + I+ + ++ A V+ N + + P M L + + + Sbjct: 78 LQNIINGLNKYPDITHAMVLNLNNQVLAHNDLSHRGQYLLDMPAKPEMTVLHLNKDYIDL 137 Query: 121 SLGVYSLERPANPQPIAYLVLQA-DSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCIN 179 + + Q I ++ + S + +F + +LL+++ L + Sbjct: 138 VNPIM-----LSGQHIGWVRIGLSQSADLKRF--EKIKFSAFAFLLIAVTLAALFATVAA 190 Query: 180 RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN 239 R + L I + + + +L DE L + +N+ L + E Sbjct: 191 RYLTRRLYAIQTVADEVKQGKRSLRV----KLDGVDEAAQLAKRFNIMLDTLVKRENEIV 246 Query: 240 ENAMRFPVSDLPNKALLMEMLEQVVARKQ 268 E+ S + L Q++A Sbjct: 247 ESHQALEQS--------EKRLNQIMAVNH 267 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 131/459 (28%), Positives = 238/459 (51%), Gaps = 15/459 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D G + + + + +R E+ + P+++LPNK LL + + +A + Sbjct: 875 KDADGKISQHIGIISDISERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLK 934 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 LM + + + L + + ++ L E+ + + P + + G +F ++ Sbjct: 935 TAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPN 994 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + A + +++L I+++ ++ SIG++ + D + EQL A +A + Sbjct: 995 T-DAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYR 1053 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+++G+N QFF Q E A L ES++ +A+E+ +F ++ QPQ + + K++ E L Sbjct: 1054 AKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEAL 1113 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 +R Q P+ P I E GL+ +G WVL + + LA+WQE G+ +P++VNLS Sbjct: 1114 IRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSV 1173 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 +Q + + ++L ++ P L LE+TE ++D + +L L + GVR+++DD Sbjct: 1174 VQFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDD 1233 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K ID LKID+ FV G+ P D+++I AII +A+SL+ + IAEG Sbjct: 1234 FGTGYSS---LSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEG 1290 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 VET Q ++L QG+ F++PLP + + Sbjct: 1291 VETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTKLLANQ 1329 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 148/463 (31%), Positives = 236/463 (50%), Gaps = 21/463 (4%) Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR 266 A+ H+D+ I ++ ++ Q+ +Q A ++ LPN+ LLME LE Sbjct: 448 AVISDHEDEIINYVITLIDITQRKAAESKIKQ--LAFYDQLTGLPNRQLLMERLESARLN 505 Query: 267 KQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFA 322 Q A++ + + + + L + ++L + +A+I G +F Sbjct: 506 SQRNGQYGAILYLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFV 565 Query: 323 VIANGVQEPWHAIT-----LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQL 376 +I + + L +++L +S+ I+ I+ SIGV +F G+ ++L Sbjct: 566 IILEQLDSDLDIASKRADLLCRKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDEL 625 Query: 377 YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMT 436 A A + A+ G+N +FF+P+ + +DI +AL ++F ++ QPQV Sbjct: 626 LKHADLAMYQAKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQV-TH 684 Query: 437 SGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM 496 G+L AE L+R Q P P I E GL++ +G WVL+++C++LA WQ + Sbjct: 685 DGQLTGAEALIRWQHPKQGTISPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLT 744 Query: 497 --LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPL 554 L L++N+SA Q V +LE L RYR P L LE+TES +D + + L Sbjct: 745 DSLVLAINISAKQFHQTGFVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQL 804 Query: 555 RNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLA 611 + GV +LDDFG GY+ L ++K LP+D LKIDK FV L D+ + I+ LA Sbjct: 805 KKYGVSFSLDDFGTGYSS---LNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLA 861 Query: 612 QSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 +S+NL +IAEGVET+ QR LA G QG+LF+RP+P+E F Sbjct: 862 KSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 133/458 (29%), Positives = 229/458 (50%), Gaps = 17/458 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 DE G +R +N + +R E+ NA ++ LPN+ L M+ LE + R++ Sbjct: 680 DEQGKSLRIDGINSDITERKQAEEQLQYNATHDTLTQLPNRLLFMDRLEHALERRRRYSD 739 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + + L A + LL + +L+ L LA++ G +F ++ Sbjct: 740 PLFAVLFLDLDEFKVINDSLGHALGDELLREIARRLQKSLRADDTLARLGGDEFTILLEE 799 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + + AI + +++ ++ +E ++ + SIG+A+ G+ A ++ A +A + Sbjct: 800 IHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNTSIGIALSNGEYEAASEILRDADTAMYR 859 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ GK FD Q +A RL E+D+ A+E +F ++ QP + + L E L Sbjct: 860 AKAGGKACYAIFDQQMHASAVSRLQLETDLRRAIERQEFLVYYQPIISLQHDTLTGFEAL 919 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI---MLPLSVNL 503 +R Q P P I E GL+V +G W+LE++ + L WQ + L +SVNL Sbjct: 920 IRWQHPQQGLVPPARFIPIAEETGLIVPIGEWILEQAAQQLKIWQTQYRNYESLKMSVNL 979 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S+ QL +++ + +L++ I L +E+TES +++ A +L LR + + L Sbjct: 980 SSKQLRDASLLGTIDRILSKTEIDNNALKVEITESILMENVQVAADVLIALRERNIEICL 1039 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-PGD--SSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++ P++ LKID+ FV + P D S ++ AI+ LA L +++IA Sbjct: 1040 DDFGTGYSS---LSYLHRFPVNTLKIDRSFVMRMRPNDENSEIVRAIVSLAHILGMEIIA 1096 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 EG+ETE Q L G QG+ FA+PL E Sbjct: 1097 EGIETELQLAQLKWIGCEQGQGYFFAKPLATSEVEALL 1134 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 225/422 (53%), Gaps = 10/422 (2%) Query: 245 FPVSDLPNKALLMEMLEQVVARK-QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKL 303 P++ LPN++LL + L++V+ R+ A++ + ++ L + +L + +L Sbjct: 665 DPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARRL 724 Query: 304 KSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIG 363 + + P + + G +F ++ G+ + L +Q+L +S + ++ + LR S+G Sbjct: 725 VARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLG 784 Query: 364 VAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALEN 422 VA+F D + L A +A + A+ +G+N +FF + + + L E + +ALE Sbjct: 785 VAVFPRDGNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLRSALER 844 Query: 423 HQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEE 482 +F + QPQV+M G++V E LLR + P+ P + E GL+V +G WV+ E Sbjct: 845 GEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIRE 904 Query: 483 SCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 +CR W+ G+ + ++VNLS Q ++ + E L + P L +EVTES + Sbjct: 905 ACRQAMLWRRAGLRPMTMAVNLSGRQFSRS-VIEAIDEALADSGLDPRWLQVEVTESVIM 963 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---P 598 +D A +L LR G+ VA+DDFG GY+ L ++K PID LKID+ F+ + Sbjct: 964 EDTQEAYTVLEALRARGLTVAVDDFGTGYSS---LAYLKRFPIDKLKIDRSFIRDIDLDE 1020 Query: 599 GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 + ++ AII +A +L ++++AEGVET AQ D+L + G QG+L +RP P + Sbjct: 1021 DNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWM 1080 Query: 659 LE 660 LE Sbjct: 1081 LE 1082 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 116/475 (24%), Positives = 232/475 (48%), Gaps = 17/475 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDL 250 +N K + + + Q D G + + + + ++ E A ++ L Sbjct: 472 INRRKDKSIYIESATITPVKQAD--GKITNYVAIKEDITEKKKAEAYTENLAYFDQLTGL 529 Query: 251 PNKALLME----MLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ +L L + Q +M + + ++ L + +L+ + +++K Sbjct: 530 PNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKA 589 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + ++++ G +F ++ + A+ + ++ +S+ +E +L SIG+A+ Sbjct: 590 IREVDTVSRLGGDEFIMLFPNT-DANAAMHIATTLIQEISKASVVEHNELTITPSIGIAI 648 Query: 367 FYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D + L A +A + ++ +N F P+ +A + L E+ + +AL+ ++ Sbjct: 649 YPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNEL 708 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QPQ+ ++G+++ AE LLR P+ P I E G ++ +G WVL + R Sbjct: 709 QLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIR 768 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 W + G + ++VNLS +Q N++ + ++L ++ L LE+TE+ + DP Sbjct: 769 QTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDP 828 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 + + ++ G+R+++DDFG GY+ L ++K + LKID+ F+ + P D Sbjct: 829 ESVINVMNTFHEQGIRMSIDDFGTGYSS---LSYLKKFKVYKLKIDQSFIRDISNDPDDR 885 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 ++++AII +A +L LQ IAEGVET Q +L G QG+ F++PLP FE+ Sbjct: 886 AIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQ 940 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 134/465 (28%), Positives = 218/465 (46%), Gaps = 21/465 (4%) Query: 205 QLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV 264 ++ R+ + +V ++ QQ ++ EE A P++ LPN+ LLM+ + Q + Sbjct: 428 SVSASRIPHTEHDTFVVTLRDITQQ--RQDEEEIRRLAFYDPLTGLPNRRLLMDRVRQAM 485 Query: 265 ARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 Q ALM + + + L + LL + +L++ + +A++ G + Sbjct: 486 VNSARLGQHGALMFLDLDHFKLLNDTLGHDVGDELLQQVAYRLRNCVREGDSVARLGGDE 545 Query: 321 FAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAE 374 F V+ G+ + A + ++L ++ + SIG+ +F D T + Sbjct: 546 FVVLLEGLSDNRTDAANQAEVVAHKILDALALPYSLRGHGYNSTPSIGIVVFMEDHETMD 605 Query: 375 QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVE 434 L +A A + A+ G+N +FFDP A +I L+ H+F + Q Q++ Sbjct: 606 DLLKKADVAMYQAKAAGRNTARFFDPVMQAAVTTHAELAKEIRLGLQRHEFVLHYQVQID 665 Query: 435 MTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG 494 G+ AE L+R P I E G+++ +G WV+E +C+ L W Sbjct: 666 SQ-GRCTGAEALVRWNHRVRGLVSPAHFIPLAEETGMILPLGEWVMESACQQLVEWSRNP 724 Query: 495 I--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILR 552 + L+VN+SA QL P VA + E L R G L LE+TES +DD + + Sbjct: 725 MTAHWTLAVNVSASQLAQPEFVASVREALQRSGAPAGQLKLELTESMLVDDVEDIIVKMM 784 Query: 553 PLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIM 609 ++ GV +LDDFG GY+ L ++K LP+ LKID+ FV + P D+ + ++ Sbjct: 785 AIKELGVSFSLDDFGTGYSS---LSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVA 841 Query: 610 LAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 L SL L +IAEGVET QRD LA QG+ F RP P + Sbjct: 842 LGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYFGRPAPADAL 886 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 135/438 (30%), Positives = 235/438 (53%), Gaps = 15/438 (3%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGV 286 L+ + + A+ ++ L N+ L ++ LEQ V ++ AL+ + + + Sbjct: 195 LKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDT 254 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL T+ ++LK+ + + +A++ G +F V+ + + + + Q+L + Sbjct: 255 LGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALK 314 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 E + +++ ++ SIGV + D A+ L A A + A+ G+++ F+ + Sbjct: 315 EPIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAH 374 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 A K+L E ++ +AL+ +F + QPQV +T+GK+VS E L+R P +PD I Sbjct: 375 ALKQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISV 434 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQE-RGIMLPLSVNLSALQLMHPNMVADMLELLTRY 524 E GL+ +G WVL+ +C + Q+ G + ++VNLSA Q P + + E L Sbjct: 435 AEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNET 494 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 ++P L LEVTES + D A L+ LR GV +A+DDFG GY+ L ++K LP+ Sbjct: 495 GLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSS---LSYLKKLPV 551 Query: 585 DVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 + LK+D+ FV +P DS+ + +AII +A L L+++AEGVET Q+++L AQ Sbjct: 552 NALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQ 611 Query: 642 GFLFARPLPIEIFEESYL 659 G+ F++PL FE+ Y+ Sbjct: 612 GYFFSKPLS---FEDLYI 626 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 140/453 (30%), Positives = 234/453 (51%), Gaps = 15/453 (3%) Query: 219 MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMI 274 LV + N + + + A ++ L N+ L L Q + + A++ Sbjct: 571 RLVGTVNDVTDQKENEEQIER-YAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLF 629 Query: 275 ITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA 334 + + + L A +++L + +L P ILA++ G +F ++ G + A Sbjct: 630 VDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVLPG-ADERAA 688 Query: 335 ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKN 393 + +LT MS + ++ +L +IGV+++ D A+ L A A + A+ +G+N Sbjct: 689 SEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRN 748 Query: 394 QIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPD 453 Q + P AA +RL + ++ NA + + QPQ+++T G +V E L+R + P Sbjct: 749 TFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPT 808 Query: 454 GSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPN 512 P I E GL++T+G+W + E+CR WQ G+ L ++VNLS Q N Sbjct: 809 LGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSN 868 Query: 513 MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAG 572 A + + L + P L LE+TES + D +A L L+ GV++++DDFG GY+ Sbjct: 869 FTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSS 928 Query: 573 LRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQR 629 L ++K P+D+LKID+ FV + P D++++ AII L + LNL++IAEGVET+ Q Sbjct: 929 ---LNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQL 985 Query: 630 DWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 D+L AGV QG+ F+RPLP E +YL ++ Sbjct: 986 DYLHAAGVDFIQGYYFSRPLPAEDMA-TYLAQR 1017 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 133/483 (27%), Positives = 234/483 (48%), Gaps = 16/483 (3%) Query: 183 LHPLRNIARELNAIPAK--ELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQ 238 LHP A+ + + E + AL R + E+ + R+ L ++L+R + Sbjct: 604 LHPEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSELESEVLERRRIESKL 663 Query: 239 NENAMRFPVSDLPNKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREI 294 A ++ L N+ LL + L + + A++ I + + L + Sbjct: 664 RYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTINDSLGHHIGDT 723 Query: 295 LLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERI 354 LL + +L L +A++ G +F +I A L ++L + + I+ Sbjct: 724 LLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRIDGH 783 Query: 355 QLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEE 413 +L SIG+ + D T L A +A + A+ G+N +F + AA E Sbjct: 784 ELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYFTAEMNAAADNYFQIE 843 Query: 414 SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMV 473 SD+ A++ ++F ++ QP +++ + ++ S E L+R + P P I E GL+ Sbjct: 844 SDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEESGLIG 903 Query: 474 TVGHWVLEESCRLLAAWQERGIMLPL-SVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 +G VL ++C L +W + G P+ ++NLS +Q PN+ + +L Y + P + Sbjct: 904 EIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICRILRDYDLTPDRIE 963 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 LE+TE+ + D A+ L+ L + G R+++DDFG GY+ L ++K P+D LKID+ Sbjct: 964 LEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSS---LAYLKRFPVDTLKIDRS 1020 Query: 593 FVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 F+ + D +++ AI+ LA SL+L +IAEGVET+ Q D L+ AQG+ A+P+ Sbjct: 1021 FITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAKPM 1080 Query: 650 PIE 652 P E Sbjct: 1081 PAE 1083 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 126/446 (28%), Positives = 233/446 (52%), Gaps = 14/446 (3%) Query: 224 YNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITC 277 + Q + +R ++ A ++ LPN+ LL + +EQ +++ + T A+M++ Sbjct: 246 RGIVQDITERKMQQGRIEYLANHDALTGLPNRNLLSDRMEQAMSQARRTGQLVAVMVLDL 305 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + + + LL + +LK + +A++ G +F V+ + A + Sbjct: 306 DRFKHINDSFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDEFVVMLVNLATQADADVI 365 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQ 396 +++L E ++ L S+GV++ D T AE L A +A + A+ G+N + Sbjct: 366 ARKILDTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAALYAAKEHGRNCYR 425 Query: 397 FFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSW 456 F+ + +++ E+ + A+ NH+ ++ QP+V++ +G++ E L+R ++P Sbjct: 426 FYTRELGARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGV 485 Query: 457 DLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVA 515 PD I E CGL++ +G WVL +C AW+ G + ++VNLSA Q ++ A Sbjct: 486 IPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAA 545 Query: 516 DMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQ 575 + L + P +L LE+TES + D +A LR L+ GV ++LDDFG GY+ Sbjct: 546 MVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSS--- 602 Query: 576 LQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWL 632 L ++K LPIDV+KID+ F++ + +S+ +II +A+SL+++ +AEGVETEAQ +L Sbjct: 603 LSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFL 662 Query: 633 AKAGVGIAQGFLFARPLPIEIFEESY 658 + QG+ F+ P+ + + Sbjct: 663 NRHRCHAMQGYYFSHPVTGDEIADML 688 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 132/458 (28%), Positives = 235/458 (51%), Gaps = 15/458 (3%) Query: 214 DDEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARK 267 +E+G + + + L++ + + A P++DLPN+ L++ LE + R Sbjct: 495 RNEVGHVTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRG 554 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+M + + + L A + LL + +L+ L L ++ G +F V+ Sbjct: 555 CRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEH 614 Query: 328 VQEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAF 385 V+ P A + + ++ +++ + ++ SIG++ + D L A +A + Sbjct: 615 VEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMY 674 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ +G+N F+ + +A +RL E+ + ALE+ +F ++ QP + + G+L+ AE Sbjct: 675 RAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEA 734 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLS 504 L+R + P I E GL+V +G WVL ++CR + W + G ++VNLS Sbjct: 735 LVRWKPQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLS 794 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 A Q ++ A + +L + L LE+TES ++ AV +L L+ GV +A+D Sbjct: 795 AEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAID 854 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L ++K ID LKID+ FV+ + DS ++ +AI+ +A++L++ + AE Sbjct: 855 DFGTGYSS---LAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAE 911 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 GVE EAQ + L G G QG+L + PLP + FE +L Sbjct: 912 GVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFEARFL 949 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 138/456 (30%), Positives = 233/456 (51%), Gaps = 17/456 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----T 269 + +G L R Q+ +R Y A +++LPN+ LL E + + + Q Sbjct: 306 QETVGNLHREIQDRQRDQERIYWM----AHYDALTELPNRVLLAERGQDAIRQAQESGAP 361 Query: 270 TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ 329 A+M + + + L + LL+ + ++L++ + R +A++ G +F ++ G Sbjct: 362 LAVMFLDLDNFKHVNDSLGHRIGDALLVEIAQRLRTTVRQRDTVARLGGDEFVLLLPG-A 420 Query: 330 EPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTAR 388 A + ++ + + I+ +L S+G+A+F + E L A +A + A+ Sbjct: 421 NAQGAARVAAKMQEAALQPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAK 480 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 G+N +FF P + + L + + ALE +Q ++ QPQV + +G++ E LLR Sbjct: 481 ADGRNSFRFFTPTMQAQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLR 540 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQ 507 P+ P I E G ++ +G WVL + L W +G+ L ++VNLSA+Q Sbjct: 541 WHHPELGAVSPAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQ 600 Query: 508 LMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFG 567 P ++ + LL Y +QP L LE+TE+ + DPHAA+A + L GVR+++DDFG Sbjct: 601 FRQPQLLELVDRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFG 660 Query: 568 MGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVE 624 GY+ L H+K I LKID+ FV L D ++++AII +AQ+L ++ AEGVE Sbjct: 661 TGYSS---LSHLKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVE 717 Query: 625 TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 T Q +L + G AQGF F+RPL ++ L+ Sbjct: 718 TAHQLTFLREQGCDEAQGFYFSRPLGAPHLQQYLLQ 753 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 136/464 (29%), Positives = 236/464 (50%), Gaps = 21/464 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYE--EQNENAMRFPVSDLPNKALLMEMLEQVV----ARK 267 D G L+ + + +R + ++ A P+++LPN+ LL E L+Q Sbjct: 267 RDISGNLLYYVGIFSDVTKRKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSG 326 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + + + LL+ + ++L S + +A++ G +F V+ Sbjct: 327 HHGAVLFLDLDNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVVVLES 386 Query: 328 VQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAI 381 + A + +++ +S+ + R SIGV MF G + E++ A Sbjct: 387 LSSVPDEAATQADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFAD 446 Query: 382 SAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLV 441 +A + A+ G+N I+F+DP + + R E ++ +E +Q ++ Q Q++ +S + + Sbjct: 447 TAMYQAKTAGRNAIRFYDPVMQASIEARAELEEELRQVVERNQLRLYYQVQMD-SSNRPL 505 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI--MLPL 499 AEVLLR Q P+ P I E G +V +G WVL+ +C L WQ + L L Sbjct: 506 GAEVLLRWQHPERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTL 565 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 +VN+SA Q + V+ + L + +P L LE+TES +++ +A +R L+ GV Sbjct: 566 AVNVSAKQFRSMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGV 625 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNL 616 ++DDFG GY+ LQ++K LP+D +KID+ FV + D++++ II +++ L L Sbjct: 626 SFSMDDFGTGYSS---LQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGL 682 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +IAEGVETEAQR++L G QG+LF RP P+ FE + Sbjct: 683 NVIAEGVETEAQREFLDLRGCHAFQGYLFGRPAPLAEFEAILRK 726 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 147/484 (30%), Positives = 241/484 (49%), Gaps = 15/484 (3%) Query: 187 RNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFP 246 +N+ + +L LH E L S N L EE A Sbjct: 385 QNLLLFQRNLEESVDSWTKLDTRHLHFK-EFKHLASSVNSMIDGLNMQAEELRHRAFHDH 443 Query: 247 VSDLPNKALLMEMLE----QVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L+ + + T AL+ I + ++ L + + LL + ++ Sbjct: 444 LTSLPNRMHSSTQLDLMISHTIKHQATAALLFIDLDHFKEINDTLGHSTGDELLRKVSQR 503 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L+ + I+A++ G +F VI ++ A ++ Q++L + I+ +L SI Sbjct: 504 LRRSVREEDIVARLGGDEFTVITGVLETRSDAESIAQKLLNELIRPYLIDGNELSVTASI 563 Query: 363 GVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GV+ F D +E L A SA + A+ G+N + + E +R ++ A+ Sbjct: 564 GVSFFPEDGDNSEILLRNADSAMYEAKRNGRNGYRLYTSAMTEEISERFALTEELREAIS 623 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 + ++ QPQV++ +G ++ AE LLR P PD I E G M+ +G WVLE Sbjct: 624 REELELYFQPQVDIRTGSILGAEALLRWNHPQRGMIPPDRFIPIAESSGQMIKIGAWVLE 683 Query: 482 ESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 + C +A W+ERGI+ P ++VN+S Q M+ +V + ELL + P L LE+TES Sbjct: 684 QVCAKVAGWKERGIVAPKIAVNISNQQ-MNRELVEQITELLASSKCDPACLELEITESCL 742 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 +++P L L+ GV +A+DDFG GY+ L ++K LPI+ LK+D+ FV L D Sbjct: 743 MENPEQMAHELSSLKALGVGIAIDDFGTGYSS---LSYLKQLPINKLKVDRSFVSDLQDD 799 Query: 601 S---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 ++ AI+ + QS+NL +IAEG+ET+ Q D L K QG+ +++PLP E F + Sbjct: 800 ENDLAITRAIVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSKPLPEEQFL-A 858 Query: 658 YLEE 661 YL++ Sbjct: 859 YLDQ 862 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 151/455 (33%), Positives = 231/455 (50%), Gaps = 14/455 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVARKQ--- 268 DE G+L + + QR E+ A P++ LPN++ L L++ + R Sbjct: 333 RDEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPLTRLPNRSRLTASLDEALTRMDGED 392 Query: 269 -TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+M I + + + LL + +L V+ R +LA++ G +F ++ +G Sbjct: 393 GRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMSG 452 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + +L + + L +E ++ SIG+++F D A L A A + Sbjct: 453 FDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTLLKNADVAMYR 512 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ GKN QFFD +RL E+ + ALE H+F + QPQ+ L AE L Sbjct: 513 AKEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERHEFELHYQPQLSAGERALAGAEAL 572 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSA 505 LR + P P I E GL+ +G WVL E+CR LAAW +G+ +P L+VNLS Sbjct: 573 LRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSP 632 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q P++ A + L + G L LE+TES + P AV++L L++ GV +++DD Sbjct: 633 RQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDD 692 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L H+K P+D LKID+ FVEGLP D +++ AI+ +A+ L Q++AEG Sbjct: 693 FGTGYSS---LSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEG 749 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 VE+E Q +L G + QG+ F RPLP F Sbjct: 750 VESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFAAL 784 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 150/640 (23%), Positives = 285/640 (44%), Gaps = 36/640 (5%) Query: 48 SIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVP 107 I + + L +I A I K + +V + S + + Sbjct: 277 EILTEINQSLIQSIADKTRVPAANITEQSKQISPLDAQLIVANMSTMPDQSSHRNTKTIS 336 Query: 108 VMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLS 167 V+ + F L +++ V+ + + + + +M ++ + + + LL++ Sbjct: 337 VISKQDFLLGEAVNVSVFIIPKT-------LWKVVVVTPQMVAINSASKVSNLILMLLIA 389 Query: 168 LILTVAISWCIN--RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLV---- 221 +++ A I R ++ P+ + +L P E L + DE G+L Sbjct: 390 IMIIAAFLGFIYCRRSLIMPIYQMVNQLQR-PVTEGGQVYPELLDDRRQDEFGLLAYHFN 448 Query: 222 --------RSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVA----RK 267 + +L Q+ +R + A+ P++ LPN+ L + LEQ +A + Sbjct: 449 QSKMALDSNNRDLKLQINERKQAEYQLKHLALHDPLTGLPNRLLFQDRLEQAIALSDRHQ 508 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+ + + + + + LL + +L +A++ G +FA I Sbjct: 509 HKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSCTGRKTDTVARLGGDEFAFIITK 568 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 V A+T Q++ +++ + I + SIG+ ++ D +E+L A A + Sbjct: 569 VNTIEDAVTFAQRLNSLLKTPIEINGNNINMGSSIGITIYPDDAANSEELLRNADIAMYQ 628 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N ++FF + Q+ +D+ +L F ++ QP + LV AE L Sbjct: 629 AKDDGRNTVRFFTSEMNARLQRNKEVLTDLAESLTKEHFELYYQPLFTIDQNILVGAEAL 688 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSA 505 +R P+ PD I E GL+ +G WVL ++CR + + GI + +++N+S Sbjct: 689 IRWHHPEKGMIPPDQFIAVAEKSGLINELGDWVLAQACREIKNFLNAGITVFKVAINISP 748 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 +Q +++ ML +L ++ + + LE+TE +D+ A+ ++ L +AG ++A+DD Sbjct: 749 VQFRRKDLLQHMLMILAQHDVSAELIELEITEGAVMDNVDQAIETMQALHDAGFQLAMDD 808 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K PI +KID+ F+ L D S+ AII ++ SL L ++AEG Sbjct: 809 FGTGYSS---LSYLKRFPIQKVKIDRSFISDLENDDDSKSITTAIIQMSHSLGLHVLAEG 865 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VETE Q +L QG+ RP+P F +++ E K Sbjct: 866 VETEEQLHYLQAEKCDYVQGYYTGRPIPASEFIKNFSESK 905 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 145/484 (29%), Positives = 242/484 (50%), Gaps = 26/484 (5%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKA 254 + + + + + P IG++ + ++ + +R+ EE + A ++ LPN+ Sbjct: 339 QVGGQTRIFNNVVAPIKVDGQTIGIVGFNQDITDR--KRNEEEIHRLAFYDSLTHLPNRR 396 Query: 255 LLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 L+ + LE + RK AL++I + + + LLL + ++LK+ + Sbjct: 397 LMFDRLEHALIGSARRKSHGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQG 456 Query: 311 MILAQISGYDFAVIANGVQEPW----HAITLGQQVLTIMSERLPI------ERIQLRPHC 360 A++ G +F VI + A + + ++ + I R Sbjct: 457 DTAARLGGDEFVVILEDIDGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCAS 516 Query: 361 SIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 SIG+A+F + TA++L RA +A + A+ G+N ++FFDP+ A R E+++ A Sbjct: 517 SIGIALFDDTMVTAKELLRRADTAMYQAKAAGRNTLRFFDPEMQAAVTHRAALETELRKA 576 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 ++ QF + Q Q++ SG+ E LLR + P P I E GL+V +G WV Sbjct: 577 IDEQQFHLCFQVQMD-QSGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWV 635 Query: 480 LEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 L +CR LAAW ++ L L+VN+SA Q + +LL + L LE+TE Sbjct: 636 LATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTE 695 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 S ++D A + + L+ G+R +LDDFG GY+ L ++K LP++ LKID+ FV + Sbjct: 696 SMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSS---LAYLKRLPLNQLKIDQSFVRDV 752 Query: 598 ---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 P D+++ I+ L L L++IAEGVET+AQ +LA G QG+LF RPLP+ F Sbjct: 753 LTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEF 812 Query: 655 EESY 658 E+ Sbjct: 813 EQFL 816 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 153/520 (29%), Positives = 246/520 (47%), Gaps = 30/520 (5%) Query: 166 LSLILTVAISWCINRLILHPLRN--IARELNAIPAKELVGHQLALPRLHQDDEIGMLVRS 223 +S +L A + I + I L + +P + + H A H D++ ++VR Sbjct: 453 VSAVLPSATAGTIRQGIERALHQGDLQSVFLDLPVEGSMHHYEARIAPHGPDKVVVVVRD 512 Query: 224 YNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCET 279 L + E+ A ++ LPN+ +E L++ + R + T AL+ + + Sbjct: 513 ITL----QKHSEEKIRRLAYFDTLTGLPNRQSFLERLDRELLRARRTNHRMALLFLDLDG 568 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQ------------ISGYDFAVIANG 327 + L + + LL T+ ++L+ L +A+ + G +F V+ Sbjct: 569 FKRINDTLGHSAGDCLLQTVADRLQEKLRAGAFIARPALDESSLHFARLGGDEFTVVLPD 628 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 V A + Q++ ++ I ++ SIG+A+F D A L A +A + Sbjct: 629 VDTVETACLIAQRIQELLGRPTLIGEQEIAVTSSIGIALFPDDGADAATLLKHADTAMYY 688 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G+N Q +D RL E DI LE +F ++ QPQV G +V E L Sbjct: 689 AKEQGRNNWQLYDRTLTTRTTARLALEGDIRKGLERGEFRLFYQPQVSADDGTIVGVEAL 748 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSA 505 +R Q P P I E GL+V +G WVL +CR + WQ+ G+ +P ++VN+SA Sbjct: 749 IRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTAACRQVRQWQQSGVPVPRVAVNVSA 808 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 QL + + ++ I L LE+TES +D + L LR GV ++DD Sbjct: 809 RQLGAAGFLDTVAAIIVATGIAADRLELELTESILMDPEAKRIKGLSRLRAMGVHFSIDD 868 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K PI LKID+ FV GLP D+ + AII +A+SLNL+++AEG Sbjct: 869 FGTGYSS---LSYIKRFPIGTLKIDQSFVHGLPQDADDAGITTAIISMARSLNLEVVAEG 925 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VET Q +L +A QG+LF+ PLP + E + Sbjct: 926 VETREQLAFLQRALCPKLQGYLFSYPLPPDEMEAILRRGR 965 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 134/455 (29%), Positives = 227/455 (49%), Gaps = 14/455 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D+ G VR + R E+ + P++ LPN+ LL + L+ + + Sbjct: 517 RDDRGRPVRITGTMTDVTDRKRFEEQLMYVSTHDPLTGLPNRTLLQDRLQHAADQAERKG 576 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++++ + + L + LL + ++L S + P + ++ +F +IA Sbjct: 577 NSVAVLLLDLDRFKLVNDSLGHQVGDKLLRAISQRLASSVRPADTIGRLGADEFLIIAED 636 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + EP A + + VL +S+ ++ QL CSIG+ +F GD T L A +A T Sbjct: 637 LTEPQMAARVAETVLAGLSQPFGLDGQQLFITCSIGITLFPGDATDIGALLRDADTAMHT 696 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G N +FF P+ EAA RL+ E + A++ QF + QP+ + + + V E L Sbjct: 697 AKSAGGNGYRFFTPEMNEAAVARLSLEHALREAIDQGQFELHYQPKASLETMQTVGVEAL 756 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 LR + P+ P I E G+++ +G WVL + + W+ G+ LP++VN+S Sbjct: 757 LRWRHPEMGMIPPSTFIPVAEETGMILAIGDWVLRAALEQINRWERAGLEPLPVAVNVSV 816 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q+ + + LL Y ++P L LE+TE+ + + L LR G+R+A+DD Sbjct: 817 RQITSSHFADRIQSLLDEYGVRPDLLELEITETAMMSNMAFIADGLAELRGRGIRIAVDD 876 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L +++ LPI LK+D+ FV P ++ ++ A II + + L L ++AEG Sbjct: 877 FGTGYSS---LSYLRRLPITTLKVDRSFVSEAPSNADTGAIAATIIAMGRQLGLTVVAEG 933 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 +ET+ Q D+L + AQGFL P+P E Sbjct: 934 IETQEQLDFLRRHRCHEAQGFLIGFPVPAAELEAR 968 Score = 94.3 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 112/329 (34%), Gaps = 35/329 (10%) Query: 3 VSRSLTIKQM-AMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAI 61 + + L+ KQ + +++ +F+ + L+ + T ++ + ++ EP + A Sbjct: 44 LRKRLSYKQARNTLVFTLVLGLFLSSVQIALDLLDMEKQ-TDQLVKQVLSTLEEPAAEAA 102 Query: 62 LKGDIPEAEAILASIKPAGVVSRADVVLP-NQFQALRKSFIPERPVPVMVTRLFELPVQI 120 D AE ++ + V RA + A ++ E + + L Sbjct: 103 YSFDQALAERVITGLFAYRPVYRAAIYEDLGNVLASKERLPTEGRLKWLAELLLPHEKSF 162 Query: 121 SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR 180 ++ + + R A + L + D + + ++ L L L A++ + Sbjct: 163 AIPL--IVRRAEELRVGELRVSIDRYVIAADFFRRAELVLATSALWMLGLATALAVMLYL 220 Query: 181 LILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE 240 I P +A + + + G L +P H DDE+G+L R N R E+ Sbjct: 221 SITKPFLRLAGAIAEVDPAQPAGRPLTVPSHHADDELGLLARITNDLLTQFDRSLVERRR 280 Query: 241 NAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCE---TLRDTA----GVLKEAQRE 293 +A L E ++ A IIT + + + A + Sbjct: 281 A-----------EAALRERETRLSGIMDNVADGIITLDEDLRIETMNRAALELFGHAAAD 329 Query: 294 IL------LL------TLVEKLKSVLSPR 310 ++ L+ + L + L Sbjct: 330 VVGKPFVTLIDEGDWTRVAMALMACLRQS 358 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 132/460 (28%), Positives = 235/460 (51%), Gaps = 15/460 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEML----EQVVARKQ 268 D G ++ ++ + Q A+ P++ LPN+A+L + L + + Sbjct: 624 DSNGEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNST 683 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+++ + ++ + LL + +LK L ++ ++ G +F V+ Sbjct: 684 RVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNN 743 Query: 329 QEPWHAITLGQQVLTIMSERLPIER-IQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 P L ++++ + + + ++ SIG++++ TAE+L +A +A + Sbjct: 744 PSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYR 803 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+H G++ ++F + A+ RL E + A+ +F ++ QPQ+ + + +++ AE L Sbjct: 804 AKHDGRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEAL 863 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 LR P+ P I E GL+ +G WVL E+CR W ++ + + L+VNLS Sbjct: 864 LRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSP 923 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 LQL H ++ + +L L LE+TES ++ V IL+ LR G+R+A+DD Sbjct: 924 LQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDD 983 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K P+DVLKIDK FVE +P D + A I+ + SL L ++AEG Sbjct: 984 FGTGYSS---LAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEG 1040 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VET+AQ ++L + G QG+L++ PLP E F + ++ Sbjct: 1041 VETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQN 1080 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 153/587 (26%), Positives = 264/587 (44%), Gaps = 27/587 (4%) Query: 93 FQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFV 152 A + P +V+ + L Y + N Q YL + A Sbjct: 223 IAAESWQAAQQARDPGLVSAVASDGRVKRLAFYPMYL--NSQTTPYLFMWAGIPEQQILA 280 Query: 153 MSTLSTLVTIYLLLSLILTVAISWCINR--LILHPLRNIARELNAIPAKELVGHQLALPR 210 + L + + ++ +IL + ++ PL +A+ + + QL Sbjct: 281 PANLEWKINLSVMAVVILFSVLLARFFGQYTLVKPLAALAQASHNFGQDQPW--QLPSQY 338 Query: 211 LHQDDEIGMLVRSYNLNQQLLQ-------RHYEEQNENAMRFPVSDLPNKALLMEMLEQV 263 Q EI L ++ Q L+ + + A ++ L N+ LL++ L+ Sbjct: 339 C-QPAEIEQLSATFTTMTQRLENSRAIQLQSEQRLEHLATHDELTGLANRTLLLDRLDHA 397 Query: 264 V----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 + + A+++I + + L Q + LL + ++L + ++++ G Sbjct: 398 IEEGMRQHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKRLCQHVRSTDTVSRLGGD 457 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAE-QLYS 378 +FA++ + I L Q +L +S I+ + SIG+++F D L Sbjct: 458 EFALVLGDLNNEESLIPLMQDLLKEISSPCHIDNHHIVVTASIGISLFPNDGNDSITLLR 517 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A A + ++ + K F+ + A K L E D+ ALE + + QP+V + SG Sbjct: 518 NADLAMYQSK-RHKGDFTFYSSDMNQHAVKILELEKDLRQALERGELLLHYQPKVSLQSG 576 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-L 497 K+V E L+R Q P P I E GL+V +G WVLE++C+ +WQ++ + + Sbjct: 577 KIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWVLEQACQQAISWQQQQLPTI 636 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 ++VNLS+ Q H N+ + +L + P L LE+TES +DDP AV + L+ Sbjct: 637 TMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMIALKER 696 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSL 614 GV ++LDDFG GY+ L +++ P+D LKID F+ + D +++ +I+ +A L Sbjct: 697 GVLLSLDDFGTGYSS---LNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAHHL 753 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 L +AEGVET Q D+L K I QG+L++RPLP E F Sbjct: 754 GLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAEDFTSLLRSN 800 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 147/492 (29%), Positives = 243/492 (49%), Gaps = 20/492 (4%) Query: 181 LILHPLRNIARELNAIPAKELVGHQLALPR--LHQDDEIGMLVRSYNLNQQLLQRHYEEQ 238 I P R + I A G + + D + G+++ S + +R + Sbjct: 410 YIEAPDRRLMLGGRTIKALRKDGSECEVEINLSRVDTDQGVMIASALRDISERRRAEGKI 469 Query: 239 NENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREI 294 E + ++ LPN+ LLM+ ++ + + AL+ I + + L + Sbjct: 470 AELSFFDHLTGLPNRTLLMDRMKLAMTASYRDGKHCALLFIDLDNFKALNETLGHEIGDQ 529 Query: 295 LLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVLTIMSERL 349 LL + +L + + +A++ G +F V+ + + +G +++ +S+ Sbjct: 530 LLRDIAPRLVASVREDDTVARLGGDEFLVLLVDLARTESEAANQVEAIGLKIIEALSQPY 589 Query: 350 PIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKR 409 + SIG +F+G + A+ L ++ A + A+ +G I FFDP+ EA KR Sbjct: 590 SLNNQHYVCTPSIGATLFFGHVVADDLLKQSDLAMYKAKAEGGASIHFFDPKMEEAVIKR 649 Query: 410 LTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECC 469 E+D+ L QF + QPQ+ ++G++ E L+R Q P P I E Sbjct: 650 AKIEADLRQGLIKKQFLLHYQPQI-FSNGRMTGVEALVRWQHPVRGLVPPSDFIPLAEET 708 Query: 470 GLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 GL++ +G+WVLE +C+ LA W R L ++VN+S Q P V + E++ Sbjct: 709 GLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSVQQFHQPEFVDHIQEVIRVTGAN 768 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 P L LE+TES ++ + + L+ G+ +LDDFG GY+ L ++K LP+D L Sbjct: 769 PERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDDFGTGYSS---LSYLKQLPLDQL 825 Query: 588 KIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFL 644 KID+ FV + P D+++ I+ LAQSL L +IAEGVETEAQR++L +G QG+ Sbjct: 826 KIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVETEAQRNFLETSGCHSCQGYF 885 Query: 645 FARPLPIEIFEE 656 F+RPLPIE FEE Sbjct: 886 FSRPLPIEEFEE 897 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 145/471 (30%), Positives = 240/471 (50%), Gaps = 16/471 (3%) Query: 199 KELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLPNKALL 256 L +QL + + + G++ + + + R+ E+ A ++ LPN+ LL Sbjct: 579 GALFWNQLFIAPVPNAE--GVITHHIGVINDVTELIRYQEQLEYQANYDGLTRLPNRNLL 636 Query: 257 MEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 + LE + Q A++ + + ++ L + + LL + E+L Sbjct: 637 RDRLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDT 696 Query: 313 LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT 372 +A+ G +F ++ + IT ++V ++E + ++ +L CS+G ++F D Sbjct: 697 VARHGGDEFVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGD 756 Query: 373 -AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 AE L +A A + A+ G+N QF+ P+ +A RL E + AL +++F + QP Sbjct: 757 DAETLMKKADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQP 816 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ 491 QV++ SG++V E L+R P+ P I E GL+ + WVL E+CR AWQ Sbjct: 817 QVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQ 876 Query: 492 ERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 ++G+ +SVNLSA N+ ++++L ++P L LE+TES + + AV + Sbjct: 877 DQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLM 936 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAI 607 L L G+ +A+DDFG GY+ L ++K P+D LKID+ FV + D ++ +AI Sbjct: 937 LNELHALGIGLAIDDFGTGYSS---LSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAI 993 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 I LA SL LQ+IAEGVET AQ D+L + QGF FA+PL E E Sbjct: 994 IALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELL 1044 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 117/449 (26%), Positives = 220/449 (48%), Gaps = 13/449 (2%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLE----QVVARKQ 268 DE G + + + ++ +++ A ++DLPN+ L + LE + + Sbjct: 369 DEAGAIRYFIGSFRDITEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDR 428 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ + + + + + LL + +L+ + +A++ G +F VI + + Sbjct: 429 QAALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEI 488 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTA 387 A + ++L + + I+ + SIG+++F D T+ ++L A +A + A Sbjct: 489 SAANDASMVADKILASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQA 548 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + GK + F+ + + + RL E+ + A+E QF + QPQ + + ++ E L+ Sbjct: 549 KAAGKGRFNFYSAEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALV 608 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQ 507 R Q P P I E L+ + +V+ ++CR W+++G + ++VNLS + Sbjct: 609 RWQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVN 668 Query: 508 LMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFG 567 ++ + ++L L LE+TES ID +L+ LR GV++A+DDFG Sbjct: 669 FSRDDLPEQVRQVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFG 728 Query: 568 MGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVE 624 GY+ L ++K LP++ LKID+ FV + DS ++++II +A SL L+++AEG+E Sbjct: 729 TGYSS---LSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIE 785 Query: 625 TEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 Q L QG+L A+P+P E Sbjct: 786 ERDQLAILLSQECDEIQGYLIAKPMPAEQ 814 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 131/460 (28%), Positives = 231/460 (50%), Gaps = 14/460 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQ--- 268 D G + L + +R +E A ++DLPN+ L+ + L Q + + + Sbjct: 170 QDGQGEISHFVALFTDISERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQH 229 Query: 269 -TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + ++ L + LL + +L + + + G +F +I Sbjct: 230 NQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPS 289 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + +P A + +++L + + I L CSIG+++ D + + L A A + Sbjct: 290 INQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYH 349 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N +F+ + +RL E+ + A+E Q + QPQ +M +L+ E L Sbjct: 350 AKAHGRNTFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEAL 409 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 LR + PD +P I E GL+V +G WVL+++CR + W G+ + ++VN+SA Sbjct: 410 LRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSA 469 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 QLM + + D+ E L R+ + L LEVTES + D A L ++ GVR+A+DD Sbjct: 470 HQLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDD 529 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K D++KID+ F+ LPGD +++++AI+ LA +L ++ +AEG Sbjct: 530 FGTGYSS---LAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEG 586 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VE E Q+ +L G QG+L PL E+ +++ Sbjct: 587 VENENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQQQ 626 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 129/458 (28%), Positives = 234/458 (51%), Gaps = 14/458 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTA 271 DE G++ L + Q+ E+ + A P+++LPN+AL + LEQ + Sbjct: 808 RDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGG 867 Query: 272 ----LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 L I + + L + + LL+ + ++K L +A++ G +F VI G Sbjct: 868 KSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFTVILPG 927 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 +++ + ++ + E ++ ++ SIG+AM D E L A +A + Sbjct: 928 IEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHADTAMYR 987 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G+ +FF E +RL+ E + A+E +Q + QP+V++ ++ E L Sbjct: 988 AKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHYQPKVDVKQCRITGMEAL 1047 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW-QERGIMLPLSVNLSA 505 +R P+ P I E GL++T+G WV++++C + L +++NLSA Sbjct: 1048 VRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLARSSRHPLQVAINLSA 1107 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q +VA + L + + P L +E+TES + D + + + LR GV+V++DD Sbjct: 1108 KQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVKVSIDD 1167 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K LP++ LKIDK F++ L D++++++I+ +A +L L ++AEG Sbjct: 1168 FGTGYSS---LSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEG 1224 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 VE +AQ +L + QG+ F++PLP E FE+ L+ Sbjct: 1225 VENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEKFLLD 1262 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 128/476 (26%), Positives = 228/476 (47%), Gaps = 16/476 (3%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKA 254 EL L+L + ++ G + + + + + E + A ++ LPN+ Sbjct: 382 KHGELFWTSLSLSAIKSNE--GFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALPNRE 439 Query: 255 LLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 L + L + A+ I + + L + + LL + ++LKS + Sbjct: 440 LFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREE 499 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 +++ G +F ++ + A + Q++L + E + I+ L SIG+A++ GD Sbjct: 500 DTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVIIDDHDLCISASIGIALYPGD 559 Query: 371 LT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 T AE L A SA + ++ G++ F+ E A ++L EE + ALEN + ++ Sbjct: 560 GTTAEALLKNADSAMYISKESGRDNYHFYSSTVQEKAYEQLLEEMYLRRALENRELVLYY 619 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QPQV + +G+LV E LLR + P P I E G +V + WVL +C+ A Sbjct: 620 QPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNMA 679 Query: 490 WQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAV 548 WQ G+ +P++VN+S N++ + +L R+ P L LE+TE I + + Sbjct: 680 WQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQTTI 739 Query: 549 AILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIA 605 L L++ G+++ +DDFG G++ L ++ PI LKI F+ L P +S+++ Sbjct: 740 YKLNKLKSLGIQITIDDFGTGFSS---LSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVK 796 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 A+I +A+SL L +IAEGVET+ Q ++L QG+L ++ + E + Sbjct: 797 AVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSKAVTSEEMGRFLAKN 852 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 133/468 (28%), Positives = 225/468 (48%), Gaps = 27/468 (5%) Query: 218 GMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----A 271 G R + +R E A ++ LPN+ E +EQ +A Q A Sbjct: 195 GRTSRLVGTVHDITERTLAEERIRYLAHHDTLTALPNRFQFEERMEQALAFAQRNGFMMA 254 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL------------AQISGY 319 ++ + + + L + LL +L L L +++ G Sbjct: 255 VLFLDLDHFKKVNDTLGHHAGDRLLQEAAGRLMKCLRRSDTLTHASREDASPFISRMGGD 314 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYS 378 +F ++ + P A + Q+++T +S+R I ++ SIG+++F D +QL Sbjct: 315 EFTILLTDLAHPQDAARVSQRIITALSKRYVIGGHEVFVGASIGISLFPSDGEDCDQLLR 374 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A +A + A+ G+N Q++ A +RLT E+++ AL+ ++F + QPQ++ SG Sbjct: 375 NADTAMYHAKELGRNTYQYYSGSMNAMALERLTLENNLRWALKRNEFRLCYQPQLDAASG 434 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-ML 497 ++V E LL +P PD I E GL+ ++G WVL +C W G+ + Sbjct: 435 RVVGMEALLSWHRPGCDVVPPDDFIPLAEETGLIASIGEWVLWNACAQAVTWLHEGLPPV 494 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 ++VNLS+LQ + + ++L + P L LE+TE + + A ++R L+ Sbjct: 495 RVAVNLSSLQFRSRRLAELVRKVLRATGLPPSHLELEITEGVFMSNEEDAAVVIRDLKKM 554 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSL 614 GVR ++DDFG GY+ L + P+D LKID+ FV + D + + AAII +A++L Sbjct: 555 GVRFSVDDFGTGYSS---LSRLSRFPLDALKIDRSFVRDISADPAAAGLTAAIIAMARNL 611 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 L +IAEGVET Q +L G QGFLF++PL + ++L + Sbjct: 612 GLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLNPDA-AAAFLRAR 658 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 647 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 140/478 (29%), Positives = 234/478 (48%), Gaps = 21/478 (4%) Query: 198 AKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKAL 255 A++ + D G + ++++ + R EQ A ++ LPN+ L Sbjct: 628 AEDGYAGYFETIKTPIRDMHGHVTGLLSVSRDITDRKKAEQQIELLAFFDALTGLPNRRL 687 Query: 256 LMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM 311 L++ L++ A Q AL+ I + +D L + LL+ + ++L+ + Sbjct: 688 LLDRLQRAGAACQRNEKLGALLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSD 747 Query: 312 ILAQISGYDFAVIANGVQEPW-----HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 +A+ G +F V+ G+ A + +++L ++ + Q SIG+ + Sbjct: 748 TVARFGGDEFVVMLEGLDADTALAALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGITL 807 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F T ++L RA A + A+ G+N +FFDP R ESD+ + H+ Sbjct: 808 FGDQRRTVDELLKRADLAMYQAKAAGRNTQRFFDPDMQAQVTARSQLESDLRQGIARHEL 867 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + LQP V+ ++ +L AE L+R + P P I E GL++ +G VL+ +C Sbjct: 868 TVHLQPIVDGST-RLCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACE 926 Query: 486 LLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 L W ++VN+SA Q P+ VA++L L P L LE+TES + D Sbjct: 927 QLVRWATHPATASFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGD 986 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGD 600 + + L+ GV ALDDFG GY+ L ++K LP+D++KID+ FV + P D Sbjct: 987 VEDTICRMAQLKRVGVGFALDDFGTGYSS---LSYLKRLPLDLVKIDQSFVRDVLTDPND 1043 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 ++++ I+ LA+SL+LQ++AEGVET Q +L G QG+LF RP+P+E FE + Sbjct: 1044 AAIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAFEREH 1101 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 134/488 (27%), Positives = 233/488 (47%), Gaps = 13/488 (2%) Query: 184 HPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAM 243 P + R + + L +A +G V Q+ +R+ E+ A Sbjct: 332 RPASVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHFVGVLYDVTQI-KRYQEDLEHQAN 390 Query: 244 RFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTL 299 ++ L N+ LL E +Q + + + +L+ I + + + + L+ + Sbjct: 391 YDTLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANV 450 Query: 300 VEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPH 359 +L++ + +A+I G +F ++ + Q++ + + + I ++ Sbjct: 451 GSRLQTCVRDGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVT 510 Query: 360 CSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILN 418 CS+GVA F D +E L + A +A + A+ G+N QF+ + + +RL+ ESD+ + Sbjct: 511 CSMGVARFPEDGEDSESLLANADTAMYRAKSSGRNNFQFYTKEMNATSGERLSLESDLWH 570 Query: 419 ALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHW 478 AL+N + + QPQ+++ G ++ E L+R Q P P I EC GL++ +G W Sbjct: 571 ALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIW 630 Query: 479 VLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 VLE +CR Q+ G+ + +++NLSA QL N V + ++ + P L LEVTE Sbjct: 631 VLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTE 690 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 S + + V L L G++++LDDFG G++ L ++K PID LKID+ F+ Sbjct: 691 SMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSS---LAYLKRFPIDRLKIDQSFIFNC 747 Query: 598 ---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 PGD+ + II LA L +++IAEGVE +L K G QG+ +RPL + Sbjct: 748 DSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDDL 807 Query: 655 EESYLEEK 662 L K Sbjct: 808 RMFLLTGK 815 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 138/479 (28%), Positives = 238/479 (49%), Gaps = 23/479 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLP 251 N ++ ++ + + D G + ++ + + E+ A P+++LP Sbjct: 360 NRRKNGDIYPERITISEVKDKD--GKVTNYVSVFTDISESKASSEQIEHLAFYDPLTNLP 417 Query: 252 NKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL++ + Q + T AL+ + + + L + ++LL E+L + Sbjct: 418 NRLLLLDRVRQAFSSSSRTGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCV 477 Query: 308 SPRMILAQISGYDFAVIANGVQ-EPWHAITLGQ----QVLTIMSERLPIERIQLRPHCSI 362 +A+ G +F V+ + A + + ++L+ + E Q + SI Sbjct: 478 RAGDTVARFGGDEFVVVLEDLDRNATEAAAIAEQIGNKILSTLHEPCQFGTHQYQSTSSI 537 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+ +F GD E L +A + + A+ G+N ++FFDP E R + ES++ A+E Sbjct: 538 GITLFSGDEHEIEDLLKQADISMYQAKKAGRNTLRFFDPAMQEKLSVRASLESELRYAIE 597 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 Q A++ Q QV+ + ++V AE L+R P+ P I E L++ VGHWV+ Sbjct: 598 KQQLALYYQVQVD-DNQRMVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVIN 656 Query: 482 ESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C LA W + L ++VN+SA Q + V + + ++I L LE+TES Sbjct: 657 TACMQLAEWAKSVEKKHLMIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTESV 716 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 ++D +A + L+ GV+++LDDFG GY+ L ++K LP+D +KID+ FV L Sbjct: 717 ILEDVDDVIAKMHALKALGVKLSLDDFGTGYSS---LSYLKKLPLDQVKIDQSFVRDLAY 773 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 P D+ M+ II LA + + +IAEGVETE + D L G + QG+LF RP+PIE + Sbjct: 774 DPNDAIMVKTIIDLANNFRINVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQLQ 832 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 139/461 (30%), Positives = 238/461 (51%), Gaps = 22/461 (4%) Query: 218 GMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT----TA 271 G + R + ++ +++ A ++ LPN+ LL + L +A + A Sbjct: 350 GGVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGA 409 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV--- 328 LM + + + L A ++LL+ + ++KS + +A+I G +F V+ + Sbjct: 410 LMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVVLLENLGAD 469 Query: 329 --QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRAISAAF 385 A + +++ +S + SIGV++ + +AE+L +A A + Sbjct: 470 IKDATQAAAHIAEKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAMY 529 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N ++FFDPQ ++ + ESD+ +A+ Q ++ Q Q++ + V AE Sbjct: 530 QAKEAGRNAVRFFDPQMQQSVETIAALESDLRHAVHERQLQLFYQIQLD-HTHHPVGAEA 588 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPLSVNL 503 LLR P P I E L++ +GHWVL+E+CR +AAW QER L L+VN+ Sbjct: 589 LLRWIHPVRGMVSPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTRDLVLAVNI 648 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRN-AGVRVA 562 SA Q P+ V + ++ ++ IQP L LE+TES +++ + + LRN G+ ++ Sbjct: 649 SARQFKQPDFVEQVGAMIRKHAIQPARLKLELTESIALEELDVIITKMHALRNGLGISLS 708 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMI 619 LDDFG GY+ L ++K LP+D +KID+ FV + GD+ M+ II +A + +++I Sbjct: 709 LDDFGTGYSS---LSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVI 765 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 AEGVET Q L + G + QG+LF RP+P+ FE + Sbjct: 766 AEGVETAGQFFLLKQYGCLLFQGYLFGRPVPLREFEALLQQ 806 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 128/457 (28%), Positives = 228/457 (49%), Gaps = 15/457 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEML----EQVVARKQ 268 D G + L + + +EQ A +++LPN+ L ME L +Q + Sbjct: 776 DRQGTVTNYIALFTDISAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGR 835 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++ I + ++ L + +L+T +L + ++++ G +F +I + Sbjct: 836 HVAVIFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADI 895 Query: 329 QEPWHAITLG-QQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 ++ + ++L +M + +L CSIG+++F D + L A +A + Sbjct: 896 EDSHQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYR 955 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+N F+ + A +RL+ E+ + +E ++ + QP++++ +GK E L Sbjct: 956 AKEVGRNNYHFYTEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEAL 1015 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 LR Q PD P I E GL++ +G V+ +CR L+ W G+ + LS+N+SA Sbjct: 1016 LRWQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSA 1075 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 +Q V D+++L+ + P + LE+TE+ ++D + ++ L++ G ++DD Sbjct: 1076 VQFRDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDD 1135 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++ PID LKID+ F+ G+ P D ++I AII L +L++Q+IAEG Sbjct: 1136 FGTGYSS---LNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEG 1192 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 VE E + L AG QG+ ARPL E E L Sbjct: 1193 VEKEDEYRALRAAGCDGIQGYFVARPLTPEQVPEWLL 1229 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 14/458 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEM----LEQVVARKQ 268 +E G S L + H +Q + A ++ LPN+ L +E L Q + Sbjct: 239 NEDGTPSYSVALISNITPHHQAKQKIRQLAYFDGLTGLPNRQLFLEHCNSSLTQARRNRS 298 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 + II + + + LL T+ ++L +S +LA++ +FA + V Sbjct: 299 PLGVCIIDIDRFKGVNDTYGYESGDALLKTVSQRLSDCMSREDVLARLGSDEFAAVIASV 358 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTA 387 L Q++L ++E + I +L +G+A+F D AE L A +A A Sbjct: 359 GSQDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDAEALLKNAATAMHQA 418 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G N +FF A +R+ E+ + AL+ Q A+ QPQV++ +G ++ E LL Sbjct: 419 KQHGSNNFRFFSKGMNRMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALL 478 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSAL 506 R + P+ P I E GL++ +G+WVLE +CR AW G L ++VN+SA Sbjct: 479 RWESPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISAR 538 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q + + ++ R I P L +E+TES ++ + L +++ G+++A+DDF Sbjct: 539 QFKQAGFIDRLDAIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDF 598 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K PID +K+D+ FV +P D+++ AII +A SL +++IAEG+ Sbjct: 599 GTGYS---MLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGI 655 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ET Q +L QG+ F RP+P+E E ++ Sbjct: 656 ETREQLAFLKDRACEEGQGYYFGRPVPVETAAEILAQQ 693 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 135/488 (27%), Positives = 245/488 (50%), Gaps = 22/488 (4%) Query: 182 ILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNEN 241 I HPLR + E +L+ ++ R+ ++ ++ ++ +R E Sbjct: 456 IRHPLRVLTAE------GKLLDVEMYSNRIMYQGSPAVIGTILDVTER--KRAEELNAFL 507 Query: 242 AMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLL 297 A +++LPN+ EMLE + ++ A+M + + + L A + LL+ Sbjct: 508 AYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMYLDMDRFKYINDSLGHAVGDQLLI 567 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 ++L+ + A++ G +F VI +++ AI + ++++ E IE +L Sbjct: 568 AFSKRLQEQIRETDFAARMGGDEFTVILPHIRDNNSAIEVARRIIERTREPFYIEDYELF 627 Query: 358 PHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG++++ D + L A SA F A+ GKN Q F K T E D+ Sbjct: 628 ITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKNGYQIFTSSMNVQTYKVFTLEKDL 687 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 A++ + ++ QP+V + +G++V AE L+R P+ P+ I E GL++++G Sbjct: 688 RKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWNHPEWGLVSPNEFIPISEETGLILSLG 747 Query: 477 HWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 +WV CR WQ G+ +P+S+N++A + + + + + ++L ++P L +E+ Sbjct: 748 NWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLSKDFMDAIQQILAETGLEPHYLEIEI 807 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP--IDVLKIDKMF 593 TES +++ + L L GV ++LDDFG GY+ L ++K I++LKID+ F Sbjct: 808 TESSLLENAETVMHTLDSLNKLGVTISLDDFGTGYSS---LSYLKRFKHTINILKIDRSF 864 Query: 594 VEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 + L D+++I+AII LAQ +N+ ++AEGVET Q L + QG+LF+RP+ Sbjct: 865 IHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQLHILKLLKCDLVQGYLFSRPVQ 924 Query: 651 IEIFEESY 658 E F + Sbjct: 925 AEAFAQLL 932 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 132/455 (29%), Positives = 228/455 (50%), Gaps = 17/455 (3%) Query: 219 MLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTAL 272 + + + + + + E N A ++ LPN+ + + L+QV+ Q + Sbjct: 353 QITGVFMIVRDITNKKEYEAKINYLAFHDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVYV 412 Query: 273 MIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPW 332 + + + + L ++LL +L+ + + + ++ G +F VI V E Sbjct: 413 LFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGKKGTVYRLGGDEFMVILTDVTER- 471 Query: 333 HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQ-LYSRAISAAFTARHKG 391 ++ ++ + + I +L SIG++ + D L A +A + A+ KG Sbjct: 472 EVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAKDKG 531 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 KN + P +A ++ ++++ AL +F + QPQV SG +V E L+R Sbjct: 532 KNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDH 591 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMH 510 P+ LPD I E GL+V +G WVL +C+ WQ++G+ L ++VNLSA Q + Sbjct: 592 PERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLK 651 Query: 511 PNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGY 570 + + E+L + R+ P L LE+TES I D H A L+ L+ GV VA+DDFG GY Sbjct: 652 QDFTQMIAEILHQTRLAPEYLELEITESSMI-DVHRATQALKELKQLGVHVAIDDFGTGY 710 Query: 571 AGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEA 627 + L ++K P++ LKID+ FV + P + ++++ II +A L + +IAEGVET+ Sbjct: 711 SS---LYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKE 767 Query: 628 QRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 + +L + QG+LF+RPLP E YL+ + Sbjct: 768 ELAFLQEHLCEEVQGYLFSRPLPSEDVA-FYLQAQ 801 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 121/473 (25%), Positives = 227/473 (47%), Gaps = 28/473 (5%) Query: 215 DEIG--MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 DE G +V ++ L + ++ + A ++ L N+ + +E + R + Sbjct: 237 DENGAAKVVSGTVVDVTELTQAQDQILQLAHFDSLTGLANRNAFRKRVELAMERAKQYGH 296 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILA-------------- 314 A++ + + + L + + LL + +L ++ + Sbjct: 297 LGAVLFLDLDNFKRINDTLGHSIGDQLLQEVARRLTDIVRGSDSICGTNFNHAIDDNLIS 356 Query: 315 QISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TA 373 ++ G +F V+ + + A ++VL + + + + + SIG+A+F Sbjct: 357 RLGGDEFTVLLPEIGKIKDAEHAARRVLNSIGDIINLSGHDIVVTPSIGIAIFPHHGENV 416 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 + L A +A + + GKN + F A++RL ES + +A++N + ++ QPQ+ Sbjct: 417 DSLLKNADAAMYYVKRAGKNDYELFVNSMNVVAKRRLELESFLRHAIDNKELSVNYQPQI 476 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 493 ++ +G+++ AE LLR + P I E GL+ +G WVL E+CR + W++ Sbjct: 477 DIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDD 536 Query: 494 GIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILR 552 G+ + ++VN+S Q ++ + ++L + L LE+TE+ +DD AV L Sbjct: 537 GLPEIQIAVNISVQQFAKQSLDKLVSKVLLETGLPVHCLELEITENMLMDDVEGAVETLH 596 Query: 553 PLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIM 609 L++ G+ +A+DDFG GY+ L ++K PID LKID+ F+ + P D+++ AII Sbjct: 597 KLKDLGINLAIDDFGTGYSS---LSYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIIS 653 Query: 610 LAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +A +L L +IAEGVE +Q ++L + QG+ F+RPL E K Sbjct: 654 MAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFSRPLIASDMEALLRSHK 706 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 126/478 (26%), Positives = 230/478 (48%), Gaps = 16/478 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLP 251 N EL ++ + + G++ + + + +R ++ A ++ LP Sbjct: 857 NKKKNGELFWEAASISPIKNAE--GIITHFVAVKEDITERKAQQTTLTYQANYDALTGLP 914 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L ++ L+Q + +K+ A+M I + +D L ++LL + ++LK L Sbjct: 915 NRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCL 974 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F +I ++E H + ++L+ + + + + SIG+ ++ Sbjct: 975 RKSDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLY 1034 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D L A +A + + G+N +F+ E AQ RL E + AL+ ++F Sbjct: 1035 PDDGNDVSVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFY 1094 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP +++ ++ AE LLR P+ PD I E GL+ +G WV+ ++C+ Sbjct: 1095 LVYQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQE 1154 Query: 487 LAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 + WQ +G + ++VNLS Q ++ + +T I L LE+TE ++D Sbjct: 1155 VVNWQTQGSPIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPG 1214 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SM 603 + I+ L R+++DDFG GY+ L ++ P + LKID+ F+ +P + ++ Sbjct: 1215 SKGIIEQLHEMDFRLSIDDFGTGYSA---LSYLIKFPFNRLKIDRSFIADIPHNQEVLAL 1271 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + II + L LQ+IAEGVET Q + L G AQG+ F+RPL E F YL+ Sbjct: 1272 VKTIIAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEF-RRYLQS 1328 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 131/455 (28%), Positives = 231/455 (50%), Gaps = 14/455 (3%) Query: 218 GMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTA 271 G + + + + A ++ LPN+ LL + LE + + + Sbjct: 333 GEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLG 392 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 ++ I + ++ L + +L ++L + + ++++ G +F V+ V+ Sbjct: 393 ILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTE 452 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHK 390 + L ++ + ++ I L SIG+A++ D L A +A + A+ K Sbjct: 453 GNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEK 512 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G+N QF+ P RL ESD+ +A++ F + QPQ+ +SG+L E L+R + Sbjct: 513 GRNNYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWR 572 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLM 509 + P I E GL+V +G WVL ++ + LA W+ +G L +SVN+SALQ Sbjct: 573 HRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFR 632 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 + + + +L ++ P + LE+TE+ + D +A+ L+ LR G R+A+DDFG G Sbjct: 633 QGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTG 692 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETE 626 ++ L +++ LPI+VLKID+ FV + P +++ +II LAQ+L + IAEGVET Sbjct: 693 FSS---LNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETR 749 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 A+ D L G + QG+ FARP+P IF++ Y ++ Sbjct: 750 AEFDVLQARGCRLMQGYFFARPMPPVIFDQWYQQQ 784 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 131/444 (29%), Positives = 233/444 (52%), Gaps = 15/444 (3%) Query: 224 YNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITC 277 ++ + + ++ + + A ++ LPN++ L + ++ Q A+M + Sbjct: 591 LSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFLDL 650 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + ++ L + + LL+ + +LK+ L L+++ G +F ++ G + A + Sbjct: 651 DHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPGT-DEAQASQV 709 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQ 396 ++L +++ IE+ +L SIG+A++ D E L A +A + + +N + Sbjct: 710 ATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRNDFR 769 Query: 397 FFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSW 456 FF + + + L + + +AL H+F + QPQV + G +V AE LLR + P+ Sbjct: 770 FFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRHPELGM 829 Query: 457 DLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVA 515 P I E G ++ +G WVL + R L W + G+ + ++VNLSA+Q HPN++A Sbjct: 830 ISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRHPNLMA 889 Query: 516 DMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQ 575 + +L + P L LE+TE+ +DDP AA+AI+ L G+R+++DDFG GY+ Sbjct: 890 LVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYSS--- 946 Query: 576 LQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWL 632 L ++K ++ LKID+ FV + P D +++ AII LA SL + IAEGVET +Q +L Sbjct: 947 LSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAFL 1006 Query: 633 AKAGVGIAQGFLFARPLPIEIFEE 656 G QG+ ++PLP + FE Sbjct: 1007 RLQGCDEVQGYYVSKPLPKDQFEA 1030 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 131/523 (25%), Positives = 241/523 (46%), Gaps = 19/523 (3%) Query: 153 MSTLSTLVTIYLLLSLILTVAISWCINRLILH-PLRNIARELNAIPAKELVGHQLALPRL 211 + L + +S A+ + ++ +L L ++ E I + + + L + Sbjct: 871 YTAQELLALTFTEISHPTERALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAI-LKVV 929 Query: 212 HQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT 269 D G + + + R E+ +A ++ LPN+AL M+ LE + R Sbjct: 930 LVRDAQGQPLHYISQVVDISDRKRMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAGQ 989 Query: 270 -----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI 324 A++++ + + L + LL + E+L+ L P LA++ G +F ++ Sbjct: 990 RWDYLCAVIVLDLDRFKVINDSLGHLVGDRLLSAIAERLQGCLRPSDTLARLGGDEFTIL 1049 Query: 325 ANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRAISA 383 + + A + + + + ++ ++ SIG+A+ G AE L A +A Sbjct: 1050 LDDIPNTAAATDIAKSIHQTLESSFNLDGYEVFATASIGIALSGMGYHRAEDLLRDADTA 1109 Query: 384 AFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSA 443 A+ +G FD A +L E+++ A+E + ++ QP + + +GK+ Sbjct: 1110 MHRAKLQGTACYVMFDTAMSGRALAQLRLETELRWAIERQELEVYYQPIISLGTGKITGF 1169 Query: 444 EVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG---IMLPLS 500 E L+R Q P+ P I E GL++ +G WVL SC L WQ++ L +S Sbjct: 1170 EALVRWQHPEQGMISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMS 1229 Query: 501 VNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVR 560 VNLS Q N++ + +++ + P TL LE+TES ++ +A A+L L+ ++ Sbjct: 1230 VNLSGKQFSQTNLIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQ 1289 Query: 561 VALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQ 617 + +DDFG GY+ L + PID LKID+ FV + + ++ AI+ LA +L + Sbjct: 1290 LYIDDFGTGYSS---LSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMD 1346 Query: 618 MIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++AEG+ET Q L QG+ F++PL + E+ + Sbjct: 1347 VVAEGIETNMQLAQLRGRRCEYGQGYFFSKPLNRQAAEQLMMN 1389 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 139/458 (30%), Positives = 227/458 (49%), Gaps = 21/458 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D + + + E + A P++ LPN+ LL + L +A Sbjct: 554 KDIKNEVANYVATFRDITANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHALASSARNR 613 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 AL+ I + + L + LL + +LKS + LA++ G +F VI Sbjct: 614 NIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGDEFVVILEN 673 Query: 328 VQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAI 381 + E A +G+++L +++ P+ + SIGV +F G + ++L +A Sbjct: 674 LSELAMDAATKAELIGEKILAALNQVYPLASQEYHGAASIGVTLFAGHALSIDELMKQAD 733 Query: 382 SAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLV 441 A + ++ G+N ++FFD + +R E ++ A++ Q + Q Q+ + G + Sbjct: 734 IAMYQSKKSGRNTLRFFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQLN-SVGTPL 792 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI--MLPL 499 SAE L+R P P I E GL++ +G WVL+ +C L +WQ+ L L Sbjct: 793 SAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTL 852 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 +VN+SA Q N VA + E + R+ I P L LE+TES +++ + + LR G+ Sbjct: 853 AVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGI 912 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNL 616 + +LDDFG GY+ LQ++K LP++ LKID+ FV L D +++ I+ +A+SLNL Sbjct: 913 QFSLDDFGTGYSS---LQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNL 969 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 +IAEGVETE Q L G QG+LF +P+PIE Sbjct: 970 NVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIEQL 1007 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 140/490 (28%), Positives = 243/490 (49%), Gaps = 13/490 (2%) Query: 175 SWCINRLILHPLRNIARELNAI-PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 W RL + + E+N+ E QL + + ++ + + +R Sbjct: 320 LWKSIRLQVQRVGVWQGEVNSTRKNGERYWEQLVVTPIKDNNGESTGYLILGEDISIRKR 379 Query: 234 HYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKE 289 + ++ A ++ LPN+ L ++ L+ +A+ + +M + + + L Sbjct: 380 YEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHINDTLGH 439 Query: 290 AQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERL 349 + LL+ ++ S L +A++ G +F V+ G+ P + + +++L + Sbjct: 440 DAGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERILKTFAPPF 499 Query: 350 PIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQK 408 + ++ SIG+A F D + L A +A + A+HKGK+ F P+ E + + Sbjct: 500 MLSGQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGKSAYARFTPEMSEVSHE 559 Query: 409 RLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIEC 468 RL ES + ALE +F ++ QP V+ SG LV+AE LLR P +PD I E Sbjct: 560 RLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFIPLAEE 619 Query: 469 CGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 GL++ +G WV++E+C+ WQ G + ++VN+S Q P ++ L ++ Sbjct: 620 TGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALNDSNLR 679 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 P L LE+TE +D+ IL+ L G+R+++DDFG GY+ L ++KS P D L Sbjct: 680 PELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGTGYSA---LSYLKSYPFDTL 736 Query: 588 KIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFL 644 KIDK FV+ + D+S++ AII +A SL L+++AEGVE E +L +QG+ Sbjct: 737 KIDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQGYF 796 Query: 645 FARPLPIEIF 654 ++RPLP + F Sbjct: 797 YSRPLPEQDF 806 Score = 61.6 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 92/267 (34%), Gaps = 21/267 (7%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 R + L+ + +A + F + + ++ +++ +++ I R L+ + Sbjct: 24 FRAASPLSFRLVAWILLFSSAFTLLASGIQIYSDYREDLSKIEQRMQVIESGYRSSLAQS 83 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 + D + + I + LR P+ + + L + Sbjct: 84 LWALDQKHLQTQMDGILSLPDIE-----------HLRLRIEPDSELVM--GELPRDTDTL 130 Query: 121 SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR 180 + + R + L + A R+Y + + ++ L+ ++++ I W Sbjct: 131 THSFELIYRDDAEFRLGELTITASLHRVYDELRRRVGFILATQFLIIFVVSILILWIFRH 190 Query: 181 LILHPLRNIA---RELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLN-----QQLLQ 232 L+ L ++A R+L+ + +Q DE+GM+ + N + + Sbjct: 191 LVTRHLADMADYTRDLSLRNLSRPLELDRPDTPAYQRDELGMVTEAINQMRERLIDDVTR 250 Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEM 259 R +E + P+ L+ + Sbjct: 251 RERDEAEIRKFSKAIDQSPSSVLICDR 277 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 136/456 (29%), Positives = 232/456 (50%), Gaps = 15/456 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQTT- 270 D+ G + R L + +R E+ A ++ LPN+ + + LEQ + Sbjct: 472 RDDDGAIYRHVALFTDITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAG 531 Query: 271 ---ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 AL++I + ++ L + +ILL+ ++ + + +A++ G +F VI + Sbjct: 532 LSMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSE 591 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 +++ + Q +L ++E ++ SIG++++ D T + L+ A A + Sbjct: 592 LEDMASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYV 651 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A++ G+N+ +F EAAQ R+ +D+ A+ QF ++ QP VEM+SG++ AE L Sbjct: 652 AKYAGRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEAL 711 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSA 505 +R Q P P I E GL+V +G WV ++ + + W+ + +SVN S Sbjct: 712 IRWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQISVNKSP 771 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 +Q H ++ E L + + ++I+E+TE +D L R+AG++VA+DD Sbjct: 772 VQFRHAESLS-WPEYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAIDD 830 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K ID LKID+ FV L D ++ AII++A L ++IAEG Sbjct: 831 FGTGYSS---LSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEG 887 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 VET Q + LA AG QG+L++RPLP E FE Sbjct: 888 VETSTQHELLAAAGCDYGQGYLYSRPLPPEEFERQL 923 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 134/454 (29%), Positives = 231/454 (50%), Gaps = 15/454 (3%) Query: 218 GMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TA 271 G+ + + ++R E+ A +++LPN+ L + L VA + A Sbjct: 454 GIPSHYVAIFHDISEIKRSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLA 513 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 ++ + + + L + LL + E+L S A++ G +F ++ +++P Sbjct: 514 VIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILMPEIEDP 573 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHK 390 L +++L + + + S+GV +F D E L A A + A+ Sbjct: 574 HDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEA 633 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 GKN Q F + +R+ E+ + +AL ++F ++ QPQV++ S ++ AE L+R Q Sbjct: 634 GKNGYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEALIRWQ 693 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQL- 508 +PDG PD I E CGL+ + HWVL+ +CR W+E+ G +SVNLS+ Q Sbjct: 694 KPDGQLVYPDEFIPIAEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFA 753 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 +V + +L + + L LEVTE+ + D +A+AI+ L GV +A+DDFG Sbjct: 754 KDQELVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGT 813 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVET 625 GY+ L ++K+ P LKID+ FV+ +PGDS ++ A+II L ++LN+++IAEGVE Sbjct: 814 GYSS---LSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEE 870 Query: 626 EAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 + Q D+L + QG+ + +P E F + + Sbjct: 871 QTQIDFLKQHRCQQVQGYFYGKPCAAEFFSQQFF 904 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 150/446 (33%), Positives = 231/446 (51%), Gaps = 21/446 (4%) Query: 228 QQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLR 281 + + R +E N A P++ LPN+ LL + L Q +A AL+ I + + Sbjct: 359 EDISARKAVEDEVNRLAFYDPLTQLPNRRLLRDRLAQALAASARSGMHGALIFIDLDNFK 418 Query: 282 DTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHAIT 336 L A+ + LL + ++L + +A++ G +F VI + A Sbjct: 419 SLNDTLGHARGDQLLKLVGQRLTHCVRESDTVARLGGDEFVVIVQDLGARLDECATQAEG 478 Query: 337 LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQI 395 +G+++L +++ P++ SIG+ +F D + + L A A + A+ G+N + Sbjct: 479 VGEKILDALNQPYPLDGHVRHSTPSIGITLFADDRDSVDDLLKEADMAMYQAKTAGRNTL 538 Query: 396 QFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGS 455 +FFD +R E D+ ++ F + QPQV + SG++ AEVLLR P Sbjct: 539 RFFDADMQAMLVQRAALEEDMRESMRLSHFLLHYQPQV-VGSGRITGAEVLLRWPHPLRG 597 Query: 456 WDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNM 513 P I E L+ +GHWVLE +C+ LA W Q+ L +SVN+SA Q P+ Sbjct: 598 LVPPAEFIPLAEDTNLITALGHWVLETACKTLADWSAQDDMKHLSVSVNVSARQFRQPHF 657 Query: 514 VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL 573 VA+++ +L R P L LE+TES ++D VA + L++ GV +LDDFG GY+ Sbjct: 658 VAEVMSILERTGADPHLLKLELTESLLVEDVEDIVAKMSALKSRGVGFSLDDFGTGYSS- 716 Query: 574 RQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRD 630 L H+K LP+D LKID+ FV + P D ++ ++ LA SL L +IAEGVE AQR+ Sbjct: 717 --LAHLKRLPLDQLKIDQSFVRDILTDPNDLAIGRMVVALADSLGLTVIAEGVELAAQRE 774 Query: 631 WLAKAGVGIAQGFLFARPLPIEIFEE 656 LA+ G QG+LF+RPLP E FE Sbjct: 775 LLAQIGCDAYQGYLFSRPLPREPFEA 800 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 136/459 (29%), Positives = 225/459 (49%), Gaps = 22/459 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVV----ARK 267 + G + + + +R E+ A+ P++ LPN+ LL E L + + ++ Sbjct: 573 RGQHGEITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRLLNERLSKALTSSGRQR 632 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 + AL+ I + + + ++LL + +L+ + ++++ G +F ++ Sbjct: 633 RHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGDEFVILLEE 692 Query: 328 V-----QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIG-VAMFYGDLTAEQLYSRAI 381 + + Q++L + + SIG + T E L A Sbjct: 693 LSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETIESLLKSAD 752 Query: 382 SAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLV 441 A + A+ GKN++ FFDP + R E D+ A QF ++LQPQV+ SG + Sbjct: 753 MAMYKAKAAGKNRLFFFDPAMQTEVEARAALERDLRQAQREKQFVLYLQPQVD-QSGHVS 811 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE--RGIMLPL 499 AE L+R Q P LP E L++ +G WVLEE+C+ L WQ+ L L Sbjct: 812 GAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNPDTAHLTL 871 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR-NAG 558 ++N+SALQ +P+ V D+ + L LE+TES ++D + ++ L+ G Sbjct: 872 AINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERMQVLKNQLG 931 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 V ++LDDFG GY+ L ++K LP+D +KID+ FV+ + P D+++ A+I L +S + Sbjct: 932 VGLSLDDFGTGYSS---LSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALGRSFS 988 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 L +IAEGVET QRD L G QG+LF RP PI+ F Sbjct: 989 LNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAF 1027 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 148/491 (30%), Positives = 250/491 (50%), Gaps = 30/491 (6%) Query: 190 ARELNAIPAKELVGHQLALPRLHQDDEIGM---------LVRSYNLNQQLLQRHYEEQNE 240 E +A E + L +P +D E+ + + R L++ + +R E Sbjct: 368 MEEADATGFSEGKYYALEMPGGRRDFELSVASKAGKEKGIQRYVMLSRDITERKENEARI 427 Query: 241 N--AMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREI 294 N A P++ LPN+ LL + LE +A Q AL+ I + + ++ Sbjct: 428 NNLAFFDPLTQLPNRRLLQDRLEHAIATGQRQAALGALLYIDLDDFKTLNDNRGHHVGDL 487 Query: 295 LLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLG-----QQVLTIMSERL 349 LL+ + ++L+ L + ++ G +F VI G+ +++L +++ Sbjct: 488 LLIAVADRLRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQAAQQVQQIAEKILQSLNQVY 547 Query: 350 PIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQK 408 ++ + SIG+ +F D E L RA A + A+ G+N ++FFDP +A + Sbjct: 548 VLDEQEYFNSPSIGICLFGDDDADIEDLLKRADQAMYHAKAAGRNTLRFFDPHMQASAAQ 607 Query: 409 RLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIEC 468 R +++I AL +QF ++ QPQV+ +G++ AE L+R P+ P I E Sbjct: 608 RFALQNEIREALLFNQFKLYYQPQVD-RTGRITGAEALIRWLHPERGMISPMDFIPIAEE 666 Query: 469 CGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL++ +G+W+L+ +C+ L W++ + L LS+N+SA Q P+ V +L +TR Sbjct: 667 SGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQQPDFVTQVLAAVTRTGA 726 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 P L LE+TES + + + L++ G++ +LDDFG GY+ L ++K LPI+ Sbjct: 727 NPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSS---LSYLKRLPINE 783 Query: 587 LKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKIDK FV + P D+++ +I LAQS+ L +IAEGVET+ QRDWL + G QG+ Sbjct: 784 LKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQGY 843 Query: 644 LFARPLPIEIF 654 F +P+ E F Sbjct: 844 YFGKPVGAEEF 854 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 133/459 (28%), Positives = 232/459 (50%), Gaps = 14/459 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQTTA 271 ++ G L+ + + +R A ++ LPN+ L+ + L Q ++ TA Sbjct: 259 RNDAGKLLYFEGTVEDITERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQAISYADRTA 318 Query: 272 ----LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 ++ + + +D + + LL+ + +L+S + +A+ G +F ++ + Sbjct: 319 SKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVLLLSN 378 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + Q+VL + SE IE SIG++++ D T+E L A +A + Sbjct: 379 IHGMDALSQTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAMYK 438 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +GKN QF+ + +RL E + NAL +++F + QP++ + + ++ E L Sbjct: 439 AKQEGKNNFQFYTRELNSILVERLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEAL 498 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL-LAAWQERGIMLPLSVNLSA 505 +R P P+ I E L+ +G WVLE++C +A Q G +P+SVN+S Sbjct: 499 IRWHNPRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVSP 558 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q N+V ++ +L ++P L LE+TE D + +L L+ G+++A+DD Sbjct: 559 RQFQQSNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAIDD 618 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K PID LKID+ FV GL D +++ AI+ L +L + ++AEG Sbjct: 619 FGTGYSS---LGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEG 675 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 VETE QRD+L G QGFLF++PLP + + L + Sbjct: 676 VETERQRDFLLSIGCDEMQGFLFSQPLPFDQAGKLLLAQ 714 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 138/454 (30%), Positives = 233/454 (51%), Gaps = 15/454 (3%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALM 273 G++ ++ ++ +R E + A ++ LPN+ LL + + Q++++ + ++ Sbjct: 220 GIVGTILDITER--KRAEEAIQQLAYFDALTGLPNRTLLRDRVSQLLSQARREGGGFGVL 277 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 + + + L A ++LL T+ ++ S + +A++ +F VI GV Sbjct: 278 HLDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRESDTVARLGSDEFVVILPGVGHEED 337 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGK 392 + + ++++ ++ + I+ + SIG+A++ D + A+ L A A A+ G Sbjct: 338 VVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGG 397 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 + QF+ + A +RLT E+ + ALE +F + QP + + SG++V E LLR P Sbjct: 398 DGYQFYSSELNHRAMERLTLETSLRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSP 457 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHP 511 + P I E GL+V +G WVL +C L A E G L +SVN+SA Q H Sbjct: 458 ELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSARQFRHD 517 Query: 512 NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYA 571 A + +L + P L LE+TES ++ A ILR L+ GV +A+DDFG GY+ Sbjct: 518 GFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYS 577 Query: 572 GLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQ 628 L ++K PID LKID+ FV+ + ++++ AI+ LA LNL ++AEGVET Q Sbjct: 578 S---LSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQ 634 Query: 629 RDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +LA + QG+ ARPLP E +LE + Sbjct: 635 LAFLAALRCDVVQGYHIARPLPPRNLLE-FLEAR 667 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 130/463 (28%), Positives = 228/463 (49%), Gaps = 19/463 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 ++ G R + + H E+ +A+ ++ L N+ LL++ L Q +AR+Q Sbjct: 365 RNQKGQPYRMGGSMTDVTEYHLIQEKILHDALHDAMTGLANRVLLIDRLTQAIARRQRRP 424 Query: 270 ---TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN 326 A++ + + + L + LL+ + ++L++ P +A++ G +FA++ Sbjct: 425 NSLFAVLFLDVDRFKVINDSLGHLAGDQLLIGIGQRLRACTRPEDTIARLGGDEFAILLE 484 Query: 327 GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY--GDLTAEQLYSRAISAA 384 + +P A+ + +++L ++ +E ++ SIG+A F TAE L A +A Sbjct: 485 DLSDPAQAMKVAERILMVLGRPFLLEGHEIFTTASIGIA-FPWEDSQTAEDLLRDADTAM 543 Query: 385 FTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAE 444 + A+ GK + + F + E+++ A E +F ++ QP V++ + K+V E Sbjct: 544 YRAKSLGKARYEVFSMTMRAQTIALMQMETELRRAAEREEFLVYYQPIVDLATLKMVGFE 603 Query: 445 VLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ---ERGIMLPLSV 501 LLR Q P+ P + E GL++ + WV+ E+CR + W R L + V Sbjct: 604 TLLRWQHPERGIISPGEFMAVAEETGLILPISWWVMAEACRQMQRWAVIFPRSRKLRIGV 663 Query: 502 NLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRV 561 NLS +++ ++ +L L LEVTE ID+ A+A L +R G+ V Sbjct: 664 NLSGRHFQQADLLPNLRSILAETGFPAQRLCLEVTEGILIDNKEVAIATLEEIRAMGIGV 723 Query: 562 ALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQM 618 ++DDFG GY+ L ++ PID LKID+ F+ L ++++ AI+MLA SL LQ+ Sbjct: 724 SMDDFGTGYSS---LSYLHRFPIDTLKIDRTFISALNSEESSATIVHAILMLAHSLRLQV 780 Query: 619 IAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +AEG+ET Q L G QG+ FARPL E+ + Sbjct: 781 VAEGIETREQYRALQALGCNYGQGYFFARPLSARQVEKLLARQ 823 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 132/455 (29%), Positives = 230/455 (50%), Gaps = 15/455 (3%) Query: 218 GMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLPNKALLMEMLEQ----VVARKQTTA 271 G ++ + + R + + ++ LPN+A L+Q ++ A Sbjct: 508 GSTTHYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIA 567 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 L+++ + + L + + LL + E+++ +A+ G +F VI + Sbjct: 568 LVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILAD-SDA 626 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHK 390 A + +++ +++ L S+G++++ D +E L A +A + A+ Sbjct: 627 VRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAKSL 686 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G+N QFF + A +RL E+ + AL N +F ++ QPQ+E+ S +L+ E L+R + Sbjct: 687 GRNTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWR 746 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLM 509 P+ W P I E G++ +G WVLEE+CR WQ G+ + P++VNLS LQL Sbjct: 747 HPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQ 806 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 + + LL+ R+ PG L LE+TE+ + D +LR L+ G R ++DDFG G Sbjct: 807 KDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTG 866 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++ P+D LKID+ F+ + +++ AII LA+ L+L+++AEGVET Sbjct: 867 YSS---LGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETA 923 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 Q ++L +AG AQGF F+RP+P + E Sbjct: 924 EQLEFLERAGCDGAQGFYFSRPVPADEIAGWLSRE 958 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 139/460 (30%), Positives = 234/460 (50%), Gaps = 15/460 (3%) Query: 215 DEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D+ G + ++ L ++ E+ E ++ LPN L + L+Q +AR + Sbjct: 595 DQRGRITHYVGISNDLTATKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEH 654 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+I + ++ L + +++L + ++L+ LS + + G +F ++ + Sbjct: 655 KVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDEFYLLLGRL 714 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTA 387 + A+ Q VL + S+ QL SIG+ +F D E L +A + A Sbjct: 715 TDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAMYHA 774 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G N QFF AA R+T ++ + A+E +F ++ QP++ +V AE L+ Sbjct: 775 KKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALI 834 Query: 448 RIQQPDG-SWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSA 505 R QP+ P I E GL++ +G WVL ++CR WQ+ G+ L ++VNLSA Sbjct: 835 RWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSA 894 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 +Q P + ++ +L + L LE+TES ++D A A L L++ G+ +ALDD Sbjct: 895 VQFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDD 954 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K+ P+D LKID+ FV L D ++I II LA SL ++++AEG Sbjct: 955 FGTGYSS---LSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEG 1011 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VE Q +L + G + QG+ F+RPLP + FE+ + Sbjct: 1012 VEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQN 1051 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 125/440 (28%), Positives = 222/440 (50%), Gaps = 14/440 (3%) Query: 226 LNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCET 279 + + + +R + +E A ++ LPN+ LL + +E VVA + +++ + + Sbjct: 376 IARDITERKHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDN 435 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 + L A + +L ++L+ + P ++A+ G +F ++ + + + Sbjct: 436 FKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAILH 495 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFF 398 +V L I ++ S+GV+++ D L A +A + ++ G+N+ QF+ Sbjct: 496 KVRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNRYQFY 555 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 P+ Q+ L+ E+D+ AL+ +F + QPQ+++ ++ E LLR + P Sbjct: 556 APEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIA 615 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADM 517 P + +E GL+V VG WVL +C A +E G+ + +SVN+SA Q ++ + Sbjct: 616 PGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQV 675 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 ++L + P L LE+TES + D A IL L GVR+A+DDFG GY+ L Sbjct: 676 EQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSS---LA 732 Query: 578 HMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K P+D LKID+ F+ P D +++ A I L L L+++AEGVET Q +L + Sbjct: 733 YLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRR 792 Query: 635 AGVGIAQGFLFARPLPIEIF 654 + QGF F+RPLP + Sbjct: 793 RACDLIQGFHFSRPLPADAL 812 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 131/472 (27%), Positives = 234/472 (49%), Gaps = 17/472 (3%) Query: 201 LVGHQLALPRLHQDDEI-GMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLPNKALLM 257 G+++ L L+ EI G +V ++ + + + + R E+ A ++DLPN+ Sbjct: 338 PNGNRVELSVLNVPVEIEGEVVGNHIIVKDITEENRVKEKIRYLAYHDELTDLPNRRKFN 397 Query: 258 EMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSP-RMI 312 ++L Q + + + A+M+I + + L + +I L + +++ Sbjct: 398 QVLHQSIEKSSQDSSSFAVMVIDIDRFKMINDSLGHSYGDIFLQGVSDRISKSAKGYHAT 457 Query: 313 LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL- 371 +A++ G +F ++ + A +L +++ + + ++ + SIG A+F Sbjct: 458 IARMGGDEFTILCETGADGREAASLADKIIEALKQPFTLKDSEFYISASIGTAIFPDHGT 517 Query: 372 TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 A L +A +A + + +GKN F+ + + E D+ A+E + ++ QP Sbjct: 518 DAVALLKKADTAMYEVKKQGKNGHLFYTTDFDAQLLENIEIERDLRKAIERKELVVYYQP 577 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ 491 Q S +++ E L+R P P I E GL+ +G WVL E+CR + W Sbjct: 578 QFHSESNRMIGVEALVRWNHPTKGMLSPGVFIPIAEETGLIYEIGTWVLREACRQMKQWH 637 Query: 492 ERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 ++G L P+SVNLS+ Q N+V + +L ++ P L LE+TES + DP +++I Sbjct: 638 DKGGPLIPVSVNLSSHQFHQRNLVQYIKNILEETKLAPHFLELEITESMMM-DPAVSISI 696 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAI 607 L L G R++LDDFG GY+ L ++K PI LKID+ F+ L D +++A I Sbjct: 697 LHELNKIGTRISLDDFGTGYSS---LSYLKKFPIHKLKIDRSFITDLSRNENDKAIVATI 753 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 I +A+ L L +IAEG+ET+ Q D L + QG+ ++RPL E+S+ Sbjct: 754 ISMAKHLKLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPLSANEVEQSFF 805 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 138/466 (29%), Positives = 228/466 (48%), Gaps = 13/466 (2%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALL 256 + AL + + ++ ++ +++L + E A ++ LPN+ LL Sbjct: 601 ADGSPFWCECALAPVRAAGDAHVVCVVKDVTERVL--YLRELERQAKYDGLTGLPNRYLL 658 Query: 257 MEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 + LEQ + + + I + + + Q + LL +L +VL Sbjct: 659 DDRLEQAIVAARRHERLLGVAFIDLDHFKVVNDNVGHRQGDELLRQAASRLAAVLRDGDT 718 Query: 313 LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL- 371 A+ G +F V+ + + A + ++ ++E ++ CSIGV+++ D Sbjct: 719 AARQGGDEFVVLLPDLGDERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRDGG 778 Query: 372 TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 + L A A + A+ G+N ++FF + + RL E + +ALEN + + QP Sbjct: 779 DGDTLLKHADIAMYQAKAAGRNVVRFFTAEMNIQVRDRLQLEGALRSALENGELHLAFQP 838 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ 491 QV+ SG+++ AE LLR Q P+ P I E GL+ +G WVL +CR W+ Sbjct: 839 QVDGGSGQVIGAEALLRWQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWE 898 Query: 492 ERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAIL 551 + G L ++VN+SA Q P++ A + E+L + P L LE+TES + D A +L Sbjct: 899 QAGRRLRIAVNVSARQFRSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQAEEML 958 Query: 552 RPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAII 608 L+ GV +ALDDFG GY+ +++ PID LKID+ FV + +++ AII Sbjct: 959 HRLKQLGVSLALDDFGTGYSSF---AYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAII 1015 Query: 609 MLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 LA SL +++IAEGVET Q+ L + G QG+LF RP+P F Sbjct: 1016 ALAHSLGMRVIAEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAEF 1061 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 117/450 (26%), Positives = 212/450 (47%), Gaps = 17/450 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D G++ + + E+ +A+ ++ LPN+ L ME + + + Sbjct: 248 KDADGVITHIVFSVTDISHHKHVEEQLCHDALHDNLTRLPNRTLFMERVNHAIKLAKRNQ 307 Query: 270 ---TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN 326 A++ + + + L + LL +L+ + +A +SG +F ++ Sbjct: 308 DYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQLEKCVRTTDTVAHLSGDEFTILLE 367 Query: 327 GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRAISAAF 385 +++ A + +++ + + ++ SIG+A+ G +E + A A + Sbjct: 368 DIKDIKDATRVAERIQATLKAPFNLNNHEVFTSASIGIALSSTGYERSEDILRDADIAMY 427 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ GK + + FD A + L E+D+ ALE +F ++ QP + +G L E Sbjct: 428 RAKELGKARHEIFDKIMHARALELLRLENDLRRALERQEFEVYYQPITSLVTGMLTGFEA 487 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER---GIMLPLSVN 502 L+R + P+ P I E GL++ +G WVL E+CR L W + L +SVN Sbjct: 488 LVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHTQFPTPEPLKMSVN 547 Query: 503 LSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVA 562 LS Q+ P+++ + +L + L LE+TES +++ +L LR ++++ Sbjct: 548 LSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTKMLLQLRARNIQLS 607 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMI 619 +DDFG GY+ L ++ P++ LKID+ FV + ++ +I II LA SL + +I Sbjct: 608 VDDFGTGYSS---LSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIITLAHSLRMDVI 664 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 AEGVET Q L QG+LF++PL Sbjct: 665 AEGVETLEQLTELKLLNCEQGQGYLFSKPL 694 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 134/501 (26%), Positives = 245/501 (48%), Gaps = 28/501 (5%) Query: 180 RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEI----------GMLVRSYNLNQQ 229 + + HPL N + + ++ + + DE+ L+RSY + Sbjct: 189 KSLHHPLLK-----NLLDQGKPKDEKIVIREVKIGDEVFEQHLHYLTENKLIRSYIFDIT 243 Query: 230 LLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARK----QTTALMIITCETLRDTAG 285 + + A ++DLPN++L E L +A+ A+M I + ++ Sbjct: 244 DRKMAENSLHYQAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKNIND 303 Query: 286 VLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIM 345 L + LL + ++L+ L ILA+ G +F ++ ++ ++V +I+ Sbjct: 304 TLGHTLGDELLGSFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVFSIL 363 Query: 346 SERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + + L SIGVA++ D AE + A +A + + G+N Q + P Sbjct: 364 QQPFQVGNHLLYLKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNHYQIYHPLITS 423 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 +RL E+ + ALE QF + QPQ+ + + + E L+R + P P I Sbjct: 424 KTSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPAKFIP 483 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTR 523 E GL++++G WVL ++C WQ++G+ + ++VNLSA Q PN V + ++L Sbjct: 484 IAEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTKILAE 543 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 ++P L LE+TE+ + + + I+ L++ GV +++DDFG GY+ L ++K +P Sbjct: 544 TNLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSS---LGYLKQIP 600 Query: 584 IDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 + +KID+ F++ L P D ++I+A++ + + N+++IAEGVET+ Q + L K Sbjct: 601 FNTIKIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEEM 660 Query: 641 QGFLFARPLPIEIFEESYLEE 661 QGF F++PL E ++L Sbjct: 661 QGFKFSKPLKPEA-AANFLSN 680 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 138/487 (28%), Positives = 233/487 (47%), Gaps = 17/487 (3%) Query: 185 PLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENA 242 P I R L ++L + + D G + + + + ++ E A Sbjct: 333 PGYAILRNYRK--DGSLFWNELYVAPVP-DPHGGEPRYFVGVQKDITEIRQYQEALERQA 389 Query: 243 MRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLT 298 ++ L N+ LL E ++Q ++ + ++ I + + + + + L+ Sbjct: 390 NYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFKRVNDSMGHSAGDELIRL 449 Query: 299 LVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRP 358 L ++L+S L +A++ G +F ++ T+ Q++ + I QL Sbjct: 450 LGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVVQRIRNTIINPFIITGRQLTV 509 Query: 359 HCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 CSIG+A F D A+ L S A SA + A+ G N +F+ + RL+ E+D+ Sbjct: 510 TCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSNNFRFYAKEMNAELGHRLSLENDLW 569 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 +ALEN Q + QPQV M + +++ E L+R Q P P I E GL+V +G Sbjct: 570 HALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGI 629 Query: 478 WVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 WV+E + Q G + ++VNLS QL ++V + + L + P L LE+T Sbjct: 630 WVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEIT 689 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 ES + + ++ L + + GV+++LDDFG GY+ L ++K LPI+ LKIDK F+ Sbjct: 690 ESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSS---LSYLKRLPINRLKIDKSFIND 746 Query: 597 LP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 + D+ + +II LA SL +Q+IAEGVE+ Q +L + G QG+L +RP P E Sbjct: 747 ITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLSRPRPFEE 806 Query: 654 FEESYLE 660 E + Sbjct: 807 MEALLRD 813 >UniRef50_C6WW34 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW34_METML Length = 623 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 143/490 (29%), Positives = 266/490 (54%), Gaps = 21/490 (4%) Query: 188 NIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRF 245 +IA E+N+ + L + + L R ++ + + + L Q + +R ++ A Sbjct: 129 DIASEVNSGHSDTLKDYSVILIRKLEEKTLQLEEANQFLQQDIARRKEAEDKIQHLAYYD 188 Query: 246 PVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVE 301 +++LPN+ LL++ L+ +A + AL+ I + + + ++LL+ + + Sbjct: 189 LLTNLPNRLLLIDRLQHTLAMSARHQNHGALLFIDLDHFKTLNDTKGHSVGDLLLVEVAK 248 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPW-----HAITLGQQVLTIMSERLPIERIQL 356 +L++ + LA++ G +F VI + E A T+ ++++ ++ ++ Sbjct: 249 RLQTCMREGDTLARLGGDEFVVILQDLSEDSSQAAVQAETVCAKIISAINLPYYLDSYLY 308 Query: 357 RPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESD 415 S+GV +F T ++L RA A + A+ G+N +F+DP A + R ESD Sbjct: 309 HSSTSVGVCLFRNQEFTVDELLKRADIAMYQAKSAGRNTQRFYDPTMQAALEARAALESD 368 Query: 416 ILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTV 475 + A++ +QF ++ Q QV+ SG + AE L+R Q P P I E GL++ + Sbjct: 369 LRLAIKKNQFRLYYQMQVD-HSGNVHGAEALIRWQHPQKGLVPPLQFIPLTEETGLIIPI 427 Query: 476 GHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 GHWV+E +C + W+ + L ++VN+SA Q P+ V +E+L+R++I+PG L L Sbjct: 428 GHWVMETACAQIKRWESDPLTRNLQVAVNVSACQFHDPSFVERAIEMLSRHKIKPGNLKL 487 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TES +D+ A+ ++ L++ GV ++DDFG G++ L ++ LP+D LKID+ F Sbjct: 488 ELTESLVLDNVEEAIMKMQALKSYGVLFSMDDFGTGFSS---LSYLTKLPLDQLKIDQSF 544 Query: 594 VEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 + + D+ ++ II +A +L +++IAEGVE+E QR++L + + QG+LF++PLP Sbjct: 545 IRNMCMNNRDAVVVQTIIGMANNLGIEVIAEGVESETQREFLEQNKCNLCQGYLFSQPLP 604 Query: 651 IEIFEESYLE 660 I+ FE + Sbjct: 605 IDAFENKLRQ 614 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 129/458 (28%), Positives = 232/458 (50%), Gaps = 15/458 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ--- 268 DE G + + + + Q+ + E A ++DLPN+ L+ + L Q + Q Sbjct: 636 RDEEGYITHFIAVKEDITQQKHNEEILAHQANYDALTDLPNRTLIFDRLRQAITEAQVHH 695 Query: 269 -TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+M I + ++ L + LL +L+ + + ++ G +F +I Sbjct: 696 SNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRLGGDEFLLIIPK 755 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + + A + QVL ++ E + + SIG+A + D L A +A + Sbjct: 756 LDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQDGKNVSTLVRNADTAMYA 815 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G+N FF + AQ R+ E+ + +A+ ++ ++ QP + + + ++V AE L Sbjct: 816 AKQEGRNVFAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVYQPFIHLNTSQIVGAEAL 875 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSA 505 +R P+ PD I E L+V +G W+L ++C+ +A W ++G L ++VN+S Sbjct: 876 MRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVANWHQQGNNGLWVAVNMSP 935 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 QL PN+V ++E + + L LE+TE +++ ++++ L + +R+A+DD Sbjct: 936 RQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQSLIKQLNHLKIRLAIDD 995 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K P VLKIDK F+ LP D +++ +I +A L L ++AEG Sbjct: 996 FGTGYSS---LSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHGLGLVVVAEG 1052 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +ET AQ D+L G QG+LF++PLP F +YL+ Sbjct: 1053 IETTAQLDFLCNQGCDYGQGYLFSKPLPPAQF-RAYLQ 1089 >UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococcus capsulatus RepID=Q60BK5_METCA Length = 594 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 138/479 (28%), Positives = 236/479 (49%), Gaps = 12/479 (2%) Query: 192 ELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLP 251 +L+ I + H ++ + +D + ++L +++ R A P++ LP Sbjct: 116 DLSRIIIDAGMRHMVSGFIVTEDGLYLGIGSGHDLFEEVANRKQNHLYHLAHYDPLTSLP 175 Query: 252 NKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL + L++ R Q AL+ I + + L A + LL + + + + Sbjct: 176 NRLLLNDRLKRACLRGQRGGYRIALLFIDLDRFKLVNDTLGHAAGDQLLQGVAGRFAACV 235 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F V+ VQ P A+ + ++ + I+ ++ SIGV +F Sbjct: 236 RKVDTVARLGGDEFTVLLEPVQGPDEALAVAAKLAQSLERPFLIQNHEITTSASIGVVLF 295 Query: 368 YG-DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D T E L +A +A + A+ +G+N+ F + +R+T ES + ALE +F Sbjct: 296 PEHDATVEGLMRKADAAMYCAKREGRNRFALFTEEMNSTVVERVTLESYLNAALEKGEFC 355 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 QPQ+ ++V E LLR P P I E GL++ +G W LE +C Sbjct: 356 CHFQPQMATADDRIVGVEALLRWTNPVLGRVPPLKFIPVAEDTGLILPLGLWALETACAQ 415 Query: 487 LAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 W +G+ L ++VN+S LQ + + ++ R I+ L LE+TES + D Sbjct: 416 QVRWLSQGLPPLRMAVNISPLQFRNREFCDQVRAIVQRTGIRAEHLELELTESAVMADAE 475 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG---LPGDSS 602 ++V ILR LR++G+R+A+DDFG GY+ L +++ P+D LKID+ FV G +P + Sbjct: 476 SSVGILRELRDSGIRLAIDDFGTGYSS---LSYLRKFPLDRLKIDRSFVSGIDRIPANEL 532 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ++ AI+ L SL L +IAEGVET + + + + G QGF + PL E F + + Sbjct: 533 IVKAIVALGGSLGLDVIAEGVETPEELECIERCGCSEYQGFRLSEPLTAEDFAHWFEDS 591 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 130/466 (27%), Positives = 230/466 (49%), Gaps = 21/466 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQV----VARK 267 D G+ + + R + E+ A ++ LPN+ L++ + Q Sbjct: 373 KDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARSN 432 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 AL+ + + + L ++ L+ + ++++ + +A+I G +F V+ Sbjct: 433 HYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLIEE 492 Query: 328 VQEPWH-----AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSRAI 381 + + +++ ++E ++ + SIGV ++ G + + + L A Sbjct: 493 IGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRHAD 552 Query: 382 SAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLV 441 A + A+ G+N ++FFDP A + R E+D+ +A+ Q ++ Q Q+ + + + Sbjct: 553 LAMYQAKESGRNGVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQL-TSDHRPL 611 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPL 499 AE L+R P P I E L++ +GHWVLE +C+ L W ER L L Sbjct: 612 GAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLIL 671 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 ++N+SA Q + V + LL +++ P L LE+TES + D V+ + L+ GV Sbjct: 672 AINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGV 731 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNL 616 ++ALDDFG GY+ L ++K LP+D +KID+ FV + P D+ M+ II LA + + Sbjct: 732 KLALDDFGTGYSS---LSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRM 788 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +IAEGVETE Q ++L + G QGFLF +P+PI+ FE + + Sbjct: 789 NVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDEFEALLGQTQ 834 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 123/456 (26%), Positives = 217/456 (47%), Gaps = 14/456 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D G ++ + + R E + A ++ LPN+AL + L Q +A + Sbjct: 621 RDRQGNILYFEGTVEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQ 680 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A+ + + + L A + LL + ++L L +A+ G +F ++ Sbjct: 681 HLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPH 740 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 VQ P ++ + +++L + ++ L S+G+A++ D L A +A + Sbjct: 741 VQTPADSVKIAERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNADAALYR 800 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G+N + + P + L ES++ ALE + ++ QPQ+ +G+++ E L Sbjct: 801 AKEEGRNGLYCYTPMLNSRGHELLALESELHKALEQQELDVYYQPQINAATGEILRLEAL 860 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSA 505 +R Q P I E GL++ +G WVLE +C WQ RG L +VNLS Sbjct: 861 VRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGFPGLGTAVNLSV 920 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q P++V + E L + L LE+TE+ + + + +L L GV +ALDD Sbjct: 921 RQFQQPHLVQQVAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHELDQMGVGIALDD 980 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L +++ P+ +KID+ F++ LP D +++ A+I L + LNL ++AEG Sbjct: 981 FGSGYSS---LNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLNLSVVAEG 1037 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 VE+++Q L G I QG+ F P+ + Sbjct: 1038 VESQSQLKVLRSLGCDIIQGYFFGPPIAAAAMTQLL 1073 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 137/445 (30%), Positives = 227/445 (51%), Gaps = 17/445 (3%) Query: 224 YNLNQQLLQRHYEEQ---NENAMRFPVSDLPNKALLMEMLEQVVARKQTTA----LMIIT 276 ++L + L R E Q + ++ LPN +L ++L Q + Q + +M I Sbjct: 590 FSLFVRDLSRRDEAQEHIRRLSHFDTLTGLPNSSLFADLLRQAIGNAQRSGESLSVMYID 649 Query: 277 CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAIT 336 + + L + LL+ + + ++ L LA++ G +F ++ Q A Sbjct: 650 IDHFQHINDTLGHRIGDRLLVEIAGRFRNALCAENTLARLGGDEFLILLPHAQ-VECAAH 708 Query: 337 LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQI 395 + ++++ ++ + IE ++ SIG+AM+ D E L RA +A A+ G+N Sbjct: 709 VAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRADTATNRAKSDGRNTY 768 Query: 396 QFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTS-GKLVSAEVLLRIQQPDG 454 +FF P+ + L E+ + ALE ++ + QPQ+++ G++ E L+R Q P+ Sbjct: 769 RFFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEF 828 Query: 455 SWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNM 513 P I E GL++ +G WV++ + L AWQ G+ L + VNLSA Q N+ Sbjct: 829 GLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQNL 888 Query: 514 VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL 573 A + +L + L LE+TES +DDP AAVA++ L GVR+++DDFG GY+ Sbjct: 889 PATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSS- 947 Query: 574 RQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRD 630 L ++K ID LKID+ FV L D +++ AI+ LA++L + IAEGVE Q Sbjct: 948 --LNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLA 1005 Query: 631 WLAKAGVGIAQGFLFARPLPIEIFE 655 +L +G QG+LF+RPLP + Sbjct: 1006 FLRASGCQEVQGYLFSRPLPPDELA 1030 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 141/464 (30%), Positives = 236/464 (50%), Gaps = 21/464 (4%) Query: 213 QDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVAR---- 266 + DE G ++ ++ + R EE A ++ LPN+ LL + L Q +A Sbjct: 471 RFDEDGHIMATFGTMMDISDRKEAEEEIRRLAFFDGLTGLPNRTLLHDRLGQALANTART 530 Query: 267 KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN 326 + A++ I + +D L A + LL + ++++ + LA++ G +F +I N Sbjct: 531 RHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENSVREADTLARLGGDEFVIILN 590 Query: 327 GV-----QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRA 380 + + A +G++++ ++ E + SIG +F G E++ +A Sbjct: 591 DLHPDPARAATEAEAVGRKLINLLREPFQLAGQNRHVTPSIGATLFSGRSLGVEEVLKQA 650 Query: 381 ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKL 440 A + A++ G+N ++F+DP+ A + R E+++ +AL+ +F++ QPQV+ G++ Sbjct: 651 DLAMYRAKNAGRNTVRFYDPELHRAVEARFELENELRHALDEDRFSVVYQPQVDAE-GRV 709 Query: 441 VSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ--ERGIMLP 498 + AE+LLR + P I E GL+V +G VL +C L AWQ L Sbjct: 710 IGAELLLRWEHAQRGAISPAEFIPVAEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRDLT 769 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 LSVN+SA Q P+ V + E+L L LE+TES +++ VA + LR G Sbjct: 770 LSVNISARQFRDPHFVPHLREILQETGAPGDRLKLELTESMLLEEIDTVVAHIDELRALG 829 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 V ALDDFG GY+ L ++K LP+ LKID+ FV + P D+++ ++ LA++L+ Sbjct: 830 VEFALDDFGTGYSS---LAYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLD 886 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 L +IAEGVET QR +L G QGFL+ P + E + L Sbjct: 887 LDVIAEGVETVEQRAFLFGLGCRHFQGFLYGYPGDLADLERAVL 930 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 128/483 (26%), Positives = 239/483 (49%), Gaps = 18/483 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE-QNENAMRFPVSDLP 251 ++I A EL+G + + ++ + + Q ++ E A ++ L Sbjct: 623 TDSITALELLGSNPYAIDAQTQESLRVI--ALQIAQYKQRKQAERSLRFMASHDGLTGLF 680 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+A L L + + R A++ + + + L + ++ E+L ++L Sbjct: 681 NRAALQHELARAIKRSNRHQKQFAVIFVDLDRFKHINDTLGHGVGDEMIKICGERLTALL 740 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 ++A+ G +F ++ + A L ++VL +E + +L S+GV+++ Sbjct: 741 READVVARFGGDEFVLLLENLSSANDAAGLAEKVLACCAEPFFLAGRELHVSASVGVSIY 800 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 + AE L A +A + A+ +G+N +F+ + ++L ES + +ALE + Sbjct: 801 PDNGADAEALLKNADTAMYRAKERGRNTFRFYAAKMNAQNTEQLMLESALRHALERGELE 860 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP++++ + ++V E L+R P P I E GL+V++G W LE +C Sbjct: 861 MHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFIPIAEELGLIVSLGKWALERACAD 920 Query: 487 LAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 +WQ+ G+ + +SVNLS Q ++AD+ +L ++P L LE+TE + +P Sbjct: 921 SRSWQKYGLPKVLMSVNLSPRQFESRTLIADIQAVLEASGLEPSLLELEITEGAVMANPE 980 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---S 602 A +LR +R+ GV +A+DDFG GY+ L ++K P+ +KID+ F+ L D+ + Sbjct: 981 HAAKLLRAIRDMGVGLAIDDFGTGYSS---LSYLKHFPLSTVKIDRSFINDLSQDADARA 1037 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI---FEESYL 659 +I II LA L ++++AEG+ET AQ D+L G AQG+ +P+P + F +L Sbjct: 1038 LIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLCKPVPADEVRNFMARHL 1097 Query: 660 EEK 662 + Sbjct: 1098 RNQ 1100 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 125/445 (28%), Positives = 229/445 (51%), Gaps = 15/445 (3%) Query: 221 VRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMI 274 + L + + ++ + A ++ LPN+ LL + L Q V R ALM Sbjct: 476 IAFQTLFRDITEQKQTSAQIEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLALMY 535 Query: 275 ITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA 334 + + +D L ++LL + E+L+ + LA++ G +F ++ NGV Sbjct: 536 LDLDHFKDVNDSLGHGAGDVLLQIVAERLQGCVRADDTLARMGGDEFVLLLNGVNGADDV 595 Query: 335 ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKN 393 ++ +++ +S+ + I +LR S+G++M D A+ L A A + A+ +G+ Sbjct: 596 ASIAGKIIHELSQPMRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQGRA 655 Query: 394 QIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPD 453 +F+ + + +R+ E + +ALE ++F ++ QPQV++ G+++ E L+R P Sbjct: 656 TYRFYTQALHDQSVERVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEALIRWNHPG 715 Query: 454 GSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL-MHPN 512 P I E GL++ +G+WV++++C W ++G + +S N+SA Q Sbjct: 716 MGQVSPARFIPIAEQSGLIIDIGNWVMKQACHQAKRWHDQGWDIKVSFNVSARQFMRSGE 775 Query: 513 MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAG 572 ++ + + L + P + +E+TES + DP IL +R G+++ALDDFG GY+ Sbjct: 776 LMQSLRDALAESGVDPTRMEVELTESLLL-DPQGMGEILHEIRALGIQLALDDFGTGYSS 834 Query: 573 LRQLQHMKSLPIDVLKIDKMFV---EGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQR 629 L +++ PI +LKID+ FV + D+ M+ II +A +L + +IAEG+ET AQR Sbjct: 835 ---LSYLRRFPISILKIDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQR 891 Query: 630 DWLAKAGVGIAQGFLFARPLPIEIF 654 D L G + QG+ ++ P+P F Sbjct: 892 DMLETQGCEVGQGYHYSCPVPATEF 916 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 128/460 (27%), Positives = 234/460 (50%), Gaps = 15/460 (3%) Query: 214 DDEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARK 267 ++ L ++ + L+ + A P++ LPN+ LL L + Sbjct: 639 RNDKQQLTHYVSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNH 698 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 AL+++ + +D + LL + +L+ + + ++ G +F V+ G Sbjct: 699 HRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIEG 758 Query: 328 VQEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 + +L ++ + + ++ SIG++++ T ++L +A +A + Sbjct: 759 NPALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMY 818 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G++ ++F + AA++RL E + AL ++ ++ QPQ++++S +++ AE Sbjct: 819 RAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEA 878 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLS 504 L+R Q P P I E GL+ +G WVL E+CR WQ++G+ + L+VN+S Sbjct: 879 LVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNIS 938 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 +Q + N++ + L + L LE+TES + + AV IL LR G+R+A+D Sbjct: 939 PVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAID 998 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L ++K P+DVLKIDK FV+ +P D + AAI+ +A +L L+++AE Sbjct: 999 DFGTGYSS---LAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAE 1055 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 GVETE Q +L + G QG+L + P+P + FE+ + Sbjct: 1056 GVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLRAQ 1095 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 142/458 (31%), Positives = 230/458 (50%), Gaps = 21/458 (4%) Query: 218 GMLVRSYNLNQQLLQRHYE--EQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTA 271 G + + QR + + ++ A ++ LPN+ L E L+ ++ +Q A Sbjct: 430 GEITNYVGAFTDITQRKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGA 489 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 + I + ++ Q + LL+ + +L S + ++A++ G +F VI + Sbjct: 490 VFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLGVD 549 Query: 332 W-----HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFT 386 + +V+ + L I P CSIG+A+F ++++ R+ A + Sbjct: 550 ESNVLAQVKDIVAKVILTIQAPLTIGTQAYHPTCSIGIALFSEKDFSDEVMKRSDMAMYQ 609 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ GKN +FFDP EA ++D+ AL N Q + QPQ + L+ AE L Sbjct: 610 AKSSGKNTYRFFDPVAEEALCSLARMDADLRFALSNQQLELHYQPQYRCQT--LIGAEAL 667 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNLS 504 LR + PD P I E GL++ +G WV+ ++C+ L WQER L ++VN+S Sbjct: 668 LRWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVNVS 727 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 A Q N V + +LL Y + L LE+TES + D + ++ LR+ G+R ALD Sbjct: 728 ARQFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALD 787 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L H+K LP+D +KID+ F+ +P DS ++ AII + Q+L L ++AE Sbjct: 788 DFGTGYSS---LSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAE 844 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 GVET+ Q +L + QGFL RP I+ FE +Y+ Sbjct: 845 GVETDEQLAFLTELDCLDIQGFLLGRPSSIDKFETTYI 882 >UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE8_9CYAN Length = 990 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 142/516 (27%), Positives = 263/516 (50%), Gaps = 24/516 (4%) Query: 165 LLSLILTVAISWCINRLILHPLRNIARELNAI------PAKELVGHQLALPRLHQDDEIG 218 ++L V + LI +P+ N E + I P +LV ++ + + E Sbjct: 476 FVNLAAEVLFDRSESFLIGYPIGNFLLEEDKIELTIVQPKGKLVFVEIRSVEIDWEGEKA 535 Query: 219 MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR-----KQTTALM 273 LV ++ ++ ++ E+ +A +++LPN+AL M+ LEQ + + + + A++ Sbjct: 536 TLVSLRDITER--KQAEEQLRHSAFYDALTNLPNRALFMDQLEQAITQTKTLNQTSFAVV 593 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 + ++ + L + LL+ + ++L++ L ILA++ G +F + +++ Sbjct: 594 FLDLDSFKFVNESLGHIIGDQLLIAIADRLETCLRSGDILARLGGDEFTFLLKDIEQVSQ 653 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGK 392 AIT+ Q + ++ + QL + S+G+A+ D T E++ A A ++A+ +GK Sbjct: 654 AITVVQNIQHKLTFPFDLSSHQLFSNASLGIALISPDYTYPEEVLRDADIAMYSAKQRGK 713 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 N F+ Q + +Q RL E+D+ A E F ++ QP V + + ++V E L+R Q Sbjct: 714 NCYAIFNSQMRKKSQHRLQLETDLRYAWEQQDFLVYYQPIVCLQTHQIVGFEALIRWQHL 773 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI---MLPLSVNLSALQLM 509 P I E GL++ +G WVL+ +C L AW L +SVNLS+ Q+ Sbjct: 774 TKGLISPYQFIPVAEETGLIIELGSWVLKTACHQLKAWTRTNPRMQHLKMSVNLSSRQIQ 833 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 N V + +++T +I P L LE+TES +++P L +R+ ++++LDDFG G Sbjct: 834 DYNFVKKINQVMTETQINPQNLKLEITESILMENPEDVKEKLIQIRSQNIQLSLDDFGTG 893 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++ + PI+ LKID+ F+ + P +++++ AII LA +L + +IAEG+ET Sbjct: 894 YSS---LSYLHNFPINTLKIDRSFIVRMNLNPENTAIVQAIITLAHTLGMDVIAEGIETV 950 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 L QG+LF++P+ + LE + Sbjct: 951 EHLKHLQALECEYGQGYLFSKPVSAIE-ADKLLESQ 985 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 128/448 (28%), Positives = 223/448 (49%), Gaps = 15/448 (3%) Query: 219 MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-----TALM 273 L+ S ++ ++ E+ + + ++ LPN+ LL++ +EQ + RKQ A++ Sbjct: 958 RLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKRKQQQPNYLFAIL 1017 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 I + + L + LL T+ +KL+ + P +A+ G +F ++ + Sbjct: 1018 FIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEFVILLEDLTIWTD 1077 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSRAISAAFTARHKGK 392 A + Q++ ++ + SIG+ + T +L A A + ++ G+ Sbjct: 1078 ATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNADIAMYRSKEAGR 1137 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 + FDP A + L E+++ ALE +F ++ QP V + + L+ E L+R P Sbjct: 1138 ARYTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRNLLGFEALVRWIHP 1197 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI---MLPLSVNLSALQLM 509 + P I E GL++ +G WVL ESCR + AWQE+ I L +SVNLS QL Sbjct: 1198 EKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNLSGKQLQ 1257 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 PN++ + +LT ++ L LE+TES +++ +L ++ ++V++DDFG G Sbjct: 1258 QPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSIDDFGTG 1317 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++ LP+D LKID+ FV + + ++ AII LA L + ++AEGVETE Sbjct: 1318 YSS---LSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGVETE 1374 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIF 654 L + G QG+ F++PL E Sbjct: 1375 QHLRQLQQLGCEFGQGYFFSKPLESEKI 1402 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 140/490 (28%), Positives = 244/490 (49%), Gaps = 17/490 (3%) Query: 184 HPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQL-----LQRHYEEQ 238 P+R I + + A P ++ GM+ + N+ +L L Sbjct: 277 QPVR-ILQHRRDKEDTLSIYEIEASPLINNGQFDGMVSTARNITDRLRLEASLDEKESRL 335 Query: 239 NENAMRFPVSDLPNKALLMEMLEQVVARKQ---TTALMIITCETLRDTAGVLKEAQREIL 295 + +++LPN+ L L Q +AR L+ I + L + Sbjct: 336 LYMSNHDLLTNLPNRVLFRNRLNQAIARNHEGNHVVLLFIGLDRFTKINESLGREIGDNT 395 Query: 296 LLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQ 355 L E+ + L+ ILA++ G +FAVI + P A +++L + E + ++ + Sbjct: 396 LTQAAERFHNCLAENQILARLGGDEFAVIMEDCRHPQDAAKTAKKLLEQLIEPIHVQPNE 455 Query: 356 LRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 + SIG++ + D + + L S A A A+ +GK++ QFF+ + + ++ E+ Sbjct: 456 IYLTASIGISSYPQDGESPKTLMSHADIAMTRAKSEGKDRYQFFEREMTQTTKRVFELEN 515 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 D+ A+ ++ ++ QPQ+++ S ++ E L+R Q P P I E GL+V+ Sbjct: 516 DLRKAVARNELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPADFIPLAEETGLIVS 575 Query: 475 VGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 +G WVL ++C+ +A W ++G+ + ++VNLS LQ H +V ++ + L I P L L Sbjct: 576 IGEWVLRQACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAKTLKETGINPACLEL 635 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 EVTES +D + A + L G +A+DDFG GY+ L +++ P+ LKIDK F Sbjct: 636 EVTESMIMDSIDKSTATMIELTELGAGLAIDDFGTGYSS---LSYLRYFPLTKLKIDKSF 692 Query: 594 VEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 +E + D+++ ++I LA SLNL+++AEG+E E Q +L K QGFLF+RP+P Sbjct: 693 IERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQGFLFSRPVP 752 Query: 651 IEIFEESYLE 660 E E+ + Sbjct: 753 AEDMEQLLRQ 762 >UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V069_9PROT Length = 734 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 132/440 (30%), Positives = 229/440 (52%), Gaps = 19/440 (4%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGV 286 L+ + A ++ LPN++LL + +++V+A K A++ I + + Sbjct: 291 LKAQAVHIEQLAFYDSLTGLPNRSLLRDRVQRVLAHSARHKNHGAILFIDLDNFKALNDT 350 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQV 341 ++LL+ + ++L+ + +A++ G +F V+ + E A +G+ V Sbjct: 351 KGHNIGDLLLIEVAKRLQDCVRNSDTVARMGGDEFVVVLEELNEDTQQAVAQAQDIGETV 410 Query: 342 LTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDP 400 L ++ ++ + SIG+++F + + ++ A +A + A+ G+N ++FFDP Sbjct: 411 LASLNRPFNLQGFEHYSSASIGISLFRDNEIGMDDVFKHADTAMYQAKTSGRNTLRFFDP 470 Query: 401 QQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPD 460 + + R E D+ +AL QF ++ Q Q+ + + AE LLR P P Sbjct: 471 DMQASLEARAVLEIDLRHALSLQQFKLFFQIQMNAA-NQPIGAEALLRWLHPKRGLVSPL 529 Query: 461 GLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI--MLPLSVNLSALQLMHPNMVADML 518 I E GL++ +G WVLE +C + AW+ + L L+VN+SA Q P+ V + Sbjct: 530 DFISLAEDTGLILPIGQWVLETACTQIKAWEANPLACELQLAVNVSARQFHQPDFVEQVR 589 Query: 519 ELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQH 578 L + P L LE+TES +++ + AV + L+ GVR ++DDFG GY+ L + Sbjct: 590 AALEKTGADPARLKLELTESVVLNNINDAVIKMSDLKEVGVRFSMDDFGTGYSS---LSY 646 Query: 579 MKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKA 635 + LP+D LKID FV + P D+ ++ II + SL +++IAEGVETEAQRD+L + Sbjct: 647 LTQLPLDQLKIDLSFVYNIGIKPTDAVIVQTIISMGNSLGMEVIAEGVETEAQRDFLERN 706 Query: 636 GVGIAQGFLFARPLPIEIFE 655 G QG+LF++P+ I FE Sbjct: 707 GCHAYQGYLFSKPVSIGEFE 726 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 160/652 (24%), Positives = 283/652 (43%), Gaps = 67/652 (10%) Query: 23 VFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVV 82 + I L+ R N ++ R + ++ A+++G+ A +LAS+ A + Sbjct: 26 LLIATVTLISMEYASLRRNMTVTMQIQMRIMAGNIAQALVRGEHEVASEVLASLAEAPEI 85 Query: 83 SRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYS-LERPANPQPIAYLVL 141 A VL + Q ++ + +RLF++ V + +S + + QP+ Y + Sbjct: 86 DTA--VLYDMQQNRFAEYVRPGSL----SRLFDMMVADQVQRHSDMHKSEIWQPVVYGGM 139 Query: 142 QADSFRMYKF---VMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPA 198 Q M + L V +++ L+ A + ++RL Sbjct: 140 QVGMLYMRSNMKGLYRQLLWYVGTTVMVMLVTLFAAALLLSRL----------------- 182 Query: 199 KELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLME 258 Q+ + + E A V+DLPN+ Sbjct: 183 -----------------------------QRAMLKAEERAGFLANYDTVTDLPNRHAFSR 213 Query: 259 M----LEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILA 314 LE R+ AL++ + + L + LL + ++L + + Sbjct: 214 HFHLLLEGARHRRGVLALLVFDLDDFKVINDTLGHDVGDKLLHLVAQRLMVAAGKKNTVY 273 Query: 315 QISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TA 373 ++ G +FA++ + + + + + + ++ + + SIG +++ D A Sbjct: 274 RVGGDEFAMMLDQPADVENVEAVANRFIRALAPPIVLNDRNFYIGVSIGASIYPYDGEDA 333 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 L A +A + A+ +GKN Q F + + RL E+++ ALE QF ++ QPQ Sbjct: 334 AHLLRDADAAMYYAKSRGKNNFQMFSAEMHHKSSTRLLLETELRVALEEKQFELYYQPQF 393 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 493 + KLV E L+R P P I E GL+V +G WVL E+CR W+ Sbjct: 394 SLPDCKLVGVEALIRWHHPQRGLLCPSSFIPVAEETGLIVRIGEWVLREACRQAMEWKAL 453 Query: 494 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP 553 G+ L +SVNLS Q N+V M +++ R + L LE+TE+ ++D A L Sbjct: 454 GVPLRMSVNLSGRQFRQENLVQTMTKIIERTGMDSSLLELEITETVLMEDAEATTTRLAD 513 Query: 554 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIML 610 L+ G+ +A+DDFG GY+ + ++K P+ LKID+ F+ + P D ++ A I + Sbjct: 514 LKAMGMHLAIDDFGTGYSSM---AYLKRFPVSRLKIDRSFIRDIPNDPDDVAITTATIQM 570 Query: 611 AQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 A SL L+++AEGVET+AQ +L + G + QG+LF+RP+ E + K Sbjct: 571 AHSLKLEVVAEGVETKAQLQFLREQGSDMVQGYLFSRPVSAREMAELVITGK 622 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 133/499 (26%), Positives = 236/499 (47%), Gaps = 26/499 (5%) Query: 187 RNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMR 244 R ++ + A E + L D G + Q + R E+ A Sbjct: 210 RPLSLDCQTATADEEDKRFIHLEAEEHRDASGRITLVSGTIQDITSRKLAEEKIRYLAYY 269 Query: 245 FPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLV 300 ++ LPN+ L E L + +A K+ A+M++ + + L ++LL + Sbjct: 270 DSLTGLPNRVLFKEHLRRALATSEQHKRQLAIMLLDLDRFKGINDSLGHDAGDLLLQQVA 329 Query: 301 EKLKSVLSPRMIL------------AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 ++L+ + P + A++ G +F ++ G+ P A + ++V+ + Sbjct: 330 DRLRLRVRPYDTVSRDSEEQRDSLIARLGGDEFTILLEGITTPEAAARVARRVIEALEAP 389 Query: 349 LPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + ++ CSIG++++ D T E L A A + A+ G + QF+ + + Sbjct: 390 FALNGNEVFISCSIGISIYPHDGTDLEILVKNADVAMYCAKDLGCSTFQFYTQEMNSVSL 449 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +RL E+ + A E +F + QPQ++ + +++ E L R P+ P I E Sbjct: 450 QRLILETHLRKAFEKEEFFLHYQPQIDCVTNRIIGLEALARWNNPELGLVSPGSFIPLAE 509 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL++ + WVL C+ L AWQ GI L ++VNLSA + N+ + ++ +R Sbjct: 510 ETGLIIALDRWVLATVCKQLEAWQAAGIPLVRVAVNLSARHFLKANLNKTIQQIRSRGAA 569 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 L LE+TE +++ V++L L+ GV +++DDFG GY+ L ++ LP Sbjct: 570 ARDHLDLEITEGMLMENAEEVVSVLGMLQETGVNISIDDFGTGYSS---LSYLTRLPFHT 626 Query: 587 LKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKID+ F+ + +S++ AII LA SL +++AEGVET Q +L + G + QG+ Sbjct: 627 LKIDRSFISQSGDNVESASVVTAIIALAHSLGKEVVAEGVETSTQLQFLKENGCRVIQGY 686 Query: 644 LFARPLPIEIFEESYLEEK 662 LF+RPLP + E E + Sbjct: 687 LFSRPLPEDKIRELLREGR 705 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 127/448 (28%), Positives = 225/448 (50%), Gaps = 14/448 (3%) Query: 218 GMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQTT----A 271 G++ + + ++ EQ P++ LPN+ L + L V + + + Sbjct: 483 GVISHFVGVFNDISRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMS 542 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 L+++ + + L + LLL + ++L + + +A++ G +FA+I G++ Sbjct: 543 LLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERA 602 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHK 390 A + + ++ + IE +L SIG+A+ D + L A +A F A+ Sbjct: 603 EDAAHVAETIINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKES 662 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 GK +FF P KRL E+++ A++N + + QP+V+ S ++V E L+R Sbjct: 663 GKGTYKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWV 722 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLM 509 P P I E GL+V +G VL +C + W + G+ + ++VNLS Q Sbjct: 723 HPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQ 782 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 PN++ + E+L + L LE+TES + D + ++ L++ GVR+++DDFG G Sbjct: 783 EPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTG 842 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++K P+ LKID+ FV L GD +S+I++II +A+++ L ++AEGVET Sbjct: 843 YSS---LSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETA 899 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIF 654 Q ++L QGF ++PLP F Sbjct: 900 QQMEFLRGQECQQVQGFFLSKPLPPSDF 927 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 151/468 (32%), Positives = 250/468 (53%), Gaps = 15/468 (3%) Query: 206 LALPRLHQDDEIGMLVRSYNLNQQL-LQRHYEEQNENAMR-FPVSDLPNKALLMEMLEQV 263 L++ + D G + S L + + LQR +E+ + P++DLPN+ LL E ++ Sbjct: 518 LSVSSVRDGDANGPITHSITLFRDISLQREAQERIQRLAHFDPLTDLPNRVLLAERTQRQ 577 Query: 264 VARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 +A++Q AL+ + + ++ L +ILL+ + +L+S++ P+ ++++ G Sbjct: 578 IAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGPQDTVSRLGGD 637 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYS 378 +F ++ HA + +LT +++ I+ +L S+G+AM D + + LY Sbjct: 638 EFLLLLP-ATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQ 696 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 RA +A ++A+ G+N+ FF + L E+ + ALE QF + QPQV + +G Sbjct: 697 RADAAMYSAKQSGRNRYGFFTADLQARTARALQIENALRRALERQQFELHYQPQVSLGTG 756 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP 498 ++V AE LLR P+ P I E G +V +G WVL + R W + + L Sbjct: 757 QVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLR 816 Query: 499 -LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 +SVNLSA+Q HP + + L + + L LE+TE +DDP AA+A++ L + Sbjct: 817 AVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDR 876 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSL 614 GVR+++DDFG GY+ L +K I LKID+ FV L D+ ++++AII +AQ+L Sbjct: 877 GVRLSMDDFGTGYSS---LSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQAL 933 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +Q AEGVET+ Q +L G QG+LF+RPLP + FE K Sbjct: 934 GMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLRAMK 981 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 132/448 (29%), Positives = 236/448 (52%), Gaps = 17/448 (3%) Query: 226 LNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCET 279 + + L +R + A ++ LPN+ L+E L+Q + Q AL+ + + Sbjct: 413 VLRDLTERKTFENQLLYLANYDALTGLPNRIHLIERLKQAIPLAERNGQHLALLFLDLDR 472 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 + L A ++LL+ + ++L + + +A+ G +F + G++E A + + Sbjct: 473 FKGVNDSLGHASGDLLLVEVSKRLSNCVRKGDTVARFGGDEFVFLLEGLEEREDAKPIAE 532 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLY-SRAISAAFTARHKGKNQIQFF 398 ++L ++ I+ +Q+ + SIG++ + D + L RA +A + A+ G N F+ Sbjct: 533 KILGALNAPFEIDNVQVFMNGSIGISTWPHDGESSDLLLRRADAAMYRAKELG-NSYAFY 591 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 +P+ ++R + E ++ ALE ++F ++ QPQ+++ +G V AE L+R + P+ L Sbjct: 592 NPEIGALPERRFSMERELRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLIL 651 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADM 517 PD I E GL+V +G WV+ +C L +W+E G+ L L+VN+S Q ++ + Sbjct: 652 PDQFIPVAESTGLIVPMGAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTL 711 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 + + L +EVTES + P A LR L G+ +++DDFG GY+ L Sbjct: 712 ESSMRESGVDSRLLEIEVTESVLMQHP-MASDTLRELSRMGILISIDDFGTGYSS---LS 767 Query: 578 HMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K LP+ LKID+ FV LP D ++ AI+ + +L L+ IAEGVE+ Q D L + Sbjct: 768 YLKKLPVYKLKIDRSFVTTLPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRR 827 Query: 635 AGVGIAQGFLFARPLPIEIFEESYLEEK 662 G QG+ ++RPLP + F +++ EK Sbjct: 828 LGCDEIQGYYYSRPLPNDTF-MTWVREK 854 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 123/459 (26%), Positives = 232/459 (50%), Gaps = 17/459 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D GM L +R E+ + P+++LPN+ LL ++Q ++ + Sbjct: 491 DSAGMARNYIASITDLTERKQVEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPD 550 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 AL+ I + ++ L + +L + +++ ++ ++++ G +F ++ Sbjct: 551 QQFALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITELVREGDTVSRLGGDEFMILMPE 610 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + + A L +++L +++ L + L S+G+A++ D + ++L A +A Sbjct: 611 LHKLEQAANLAERILHNIAQPLENDSH-LMITPSVGIAVYPNDGDSFDKLLRNADAAVHF 669 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ +G+N QF+ + + A +RL E + A+EN +F ++ QPQ+ + G L E L Sbjct: 670 AKRQGRNNYQFYTAEMNQRASERLQVEISLRKAVENQEFELFYQPQLNLRDGSLAGVEAL 729 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSA 505 +R + P+ P+ I E GL++ +G WVL E+CR A W + +SVN+S Sbjct: 730 IRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAAKSTEPFTMSVNVSV 789 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q P +V ++ L + P +L++E+TES + D + +L L+ GV+++LDD Sbjct: 790 RQFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLLHELKELGVQLSLDD 848 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ + ++K +D LKID+ F+ L P D+++ +AII +A L +AEG Sbjct: 849 FGTGYSSM---AYLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVASHFGLVTVAEG 905 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +E Q ++LA G QG+ + +P+P E Y + Sbjct: 906 IEKPEQAEFLASVGCIEGQGYYYEKPIPANDLTERYFAD 944 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 130/453 (28%), Positives = 228/453 (50%), Gaps = 17/453 (3%) Query: 219 MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-----TALM 273 L+ S L+ ++ E+ A+ ++ LPN+ LL++ +EQ + R Q AL+ Sbjct: 1020 RLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRIEQAIKRTQQEEKYLFALL 1079 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 I + + L + LL + +KLK+ + P +A+ G +F ++ + Sbjct: 1080 FIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVARFGGDEFVILLENLTSRTE 1139 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG--DLTAEQLYSRAISAAFTARHKG 391 A + QQ+ + ++ SIG+ F + +A +L A A + A+ KG Sbjct: 1140 ATKMAQQITDELRSSFCLQGQDFFISVSIGIT-FPSSYEESASELLRNADIAMYRAKEKG 1198 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 + + FD + A + L E+++ ALE + + QP V +T+GKL+ E L+R + Sbjct: 1199 RARYTIFDSKMHIQATRLLELETNLRLALEREELIVHYQPIVSLTTGKLLGFEALVRWEH 1258 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER--GIM-LPLSVNLSALQL 508 P P I E GL++ +G WVL ESCR + AWQ+ G+ + +SVNLS QL Sbjct: 1259 PKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQMKAWQKEFSGLDKIRVSVNLSGKQL 1318 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 +P+++ + +L + ++ L LE+TES +++ +L ++ +++++DDFG Sbjct: 1319 EYPHLINCLESILKQTGLEGKNLKLEITESMLMNNKEVVSDLLLQIKGKNIQISIDDFGT 1378 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVE---GLPGDSSMIAAIIMLAQSLNLQMIAEGVET 625 GY+ L ++ LP+D LKID+ FV L + ++ AII LA L + ++AEGVET Sbjct: 1379 GYSS---LSYLHYLPVDTLKIDRSFVNRMTQLGENFEIVEAIINLAHHLQMDVVAEGVET 1435 Query: 626 EAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 E L + G QG+ F++PL + + Sbjct: 1436 EQHIKQLKQLGCESGQGYFFSKPLDSQKVTSWF 1468 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 135/459 (29%), Positives = 239/459 (52%), Gaps = 15/459 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEML----EQVVARK 267 D G + + + R E+ A +++LPN+AL +E L +Q Sbjct: 595 RDRAGHVSHWVCTSIDITDRKESERRIRFLAEHDVLTELPNRALCIERLRLALQQARRTG 654 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 Q A++ I + ++ L + LL ++ ++L + ++++ G +F V+ NG Sbjct: 655 QKVAVLFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVVVLNG 714 Query: 328 VQEPWHAITLG-QQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAF 385 + + + Q+++ + + ++ ++ CS+G+++F D ++L +A A + Sbjct: 715 LADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMY 774 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ +G+N QFF + + AQ RL E+ + +A+ Q ++ QP++ + G++ E Sbjct: 775 QAKAQGRNGAQFFTAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEG 834 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLS 504 LLR P+ PD I E GL++ +G WV+E +C + W+ +G+ + +S+NLS Sbjct: 835 LLRWHSPELGHVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLS 894 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 ALQL P ++ + L R+ + PG L LE+TES +D A + L LR G+R+++D Sbjct: 895 ALQLRDPGLLDVLRASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSID 954 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L ++ PID LKID+ FV + P D ++I AII L +L L+++AE Sbjct: 955 DFGTGYSS---LNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAE 1011 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 GVE E + L AG QG+ FARP+ + L+ Sbjct: 1012 GVERELEVQALRAAGCDELQGYHFARPMAADTATAWLLD 1050 >UniRef50_C6P3U3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3U3_9PROT Length = 600 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 149/534 (27%), Positives = 255/534 (47%), Gaps = 43/534 (8%) Query: 147 RMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQL 206 R+Y+ T+ +++ + I + P N A ++ + A H+L Sbjct: 67 RVYELYPDTIRIVLSGSADFDSVTGAINRGAIYKFFTKPWDNEALRVDVMEA--FWRHEL 124 Query: 207 ALPRLHQDDEI---GMLVRSYNLNQQLLQRHYEEQNEN-AMRFPVSDLPNKALLMEMLEQ 262 A + EI +L+ NL H + Q + A ++ LPN+ L ++ L+Q Sbjct: 125 AQEKERLLQEIQSANVLLSQLNLELASAMEHKDSQIKRIAHYDSLTALPNRLLFLDRLDQ 184 Query: 263 VVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISG 318 VAR A++ + + + + LL T+ +KL S + +A+I+ Sbjct: 185 EVARANRDDQMVAVLSLDLDRFKKVNESFGHPVGDQLLQTVAKKLSSQIRACDTVARIAD 244 Query: 319 YDFAVIANGVQEPWHAITLGQQVLTIMS-ERLPIERIQLRPHCSIGVAMFYGDL-TAEQL 376 +FA++ GV+ A + Q++L + + I ++ SIG++++ D L Sbjct: 245 DEFAIVLTGVKATHAAGEVAQKILDSFAHSPISISDSEVFITLSIGISIYPVDGVNTTAL 304 Query: 377 YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMT 436 A +A A+ +G+N Q++ Q + +RL E+++ AL ++F + QP+V+M Sbjct: 305 LKSADTALHQAKREGRNNFQYYTVQMNATSWQRLKLETELRQALARNEFELHYQPKVDMD 364 Query: 437 SGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM 496 K+V E LLR Q + P I +E GL++ VG WVL E+C+ AWQ+ GI Sbjct: 365 CNKIVGMEALLRWQSAERGLVTPAEFIPLLEETGLILPVGEWVLREACKQARAWQDAGIP 424 Query: 497 -LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI-------------D 542 + ++VNLS+LQ P+ +L+++ + + P + D Sbjct: 425 DVHIAVNLSSLQFRQPDFAGSVLKIMQEHGLDP-----------AMNGIELELTESLLLD 473 Query: 543 DPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---G 599 + + L L AG+R ++DDFG GY+ L ++K PI LKID+ FV+ L Sbjct: 474 NVARTIDTLNTLHEAGIRFSIDDFGTGYSS---LSYLKRFPISSLKIDQSFVQDLSSNRD 530 Query: 600 DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 D S+++AII L +SL L +IAEGVET Q L + G QG+LF+RP+P+ Sbjct: 531 DESIVSAIIALGRSLGLSVIAEGVETAEQSAQLRRMGCDGMQGYLFSRPVPVAE 584 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 135/466 (28%), Positives = 230/466 (49%), Gaps = 22/466 (4%) Query: 214 DDEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 D G + + + L+ E + A P++ +PN+ LL+ L+Q + Sbjct: 261 RDGRGKVTHYVSTFSDISNLKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSG 320 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 AL+II + + L + LL+ + +L + + A+ G +F V+ Sbjct: 321 QFGALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEE 380 Query: 328 VQEPW-----HAITLGQQVLTIMSERLPIERI-QLRPHCSIGVAMFYG-DLTAEQLYSRA 380 + A + +++ ++ + + SIG+++F+G + T + L +A Sbjct: 381 LGSEQEGAAVQAEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQA 440 Query: 381 ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKL 440 A + A+ G+N I+FFD +R E+ + AL +F +++QPQV+ +L Sbjct: 441 DIALYKAKDAGRNAIRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAV-RRL 499 Query: 441 VSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE--RGIMLP 498 + AE LLR Q P + P+ I E GL+V +G WVL+++C L W + R L Sbjct: 500 IGAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLF 559 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 LSVN+SA Q + VA + + L R+ P L LE+TES +D+ + ++ LR G Sbjct: 560 LSVNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIG 619 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 VR +LDDFG GY L ++K P + LK+D+ F+ + P D++++ AII + +L Sbjct: 620 VRFSLDDFGTGY---ASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLR 676 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 L ++AEGVE + Q +L K + QG+LF RP+ + F S E Sbjct: 677 LSVVAEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDDFRASLGSE 722 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 129/446 (28%), Positives = 216/446 (48%), Gaps = 13/446 (2%) Query: 218 GMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TA 271 G + +Y + + + R + E + A ++ LPN+ALL + L Q +AR + A Sbjct: 264 GQFLGTYGIARDVTDRKHAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGNEEVA 323 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 ++ + + + L + + LL + ++L++ L LA++ G +F ++ + + Sbjct: 324 VLFLDLDRFKVVNDSLGHSVGDQLLQQVAQRLRACLREGDTLARLGGDEFTLLLPAIPDR 383 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHK 390 + Q+ + + + + +L SIG+A+F T E L A A + + Sbjct: 384 PAVERVAQKCIDALEQPFMVHNHRLFLGVSIGIALFPEHGETLETLIKHADVAMYHVKEH 443 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 GK FFD L E+ + ALE H+F + QPQV++ SG++ E L+R Q Sbjct: 444 GKGHYTFFDQAMGSRIDHHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTGMEALIRWQ 503 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMH 510 P+ P I E GL++ +G W+L +C L W + L L+VNLS LQ+ Sbjct: 504 HPETGEVSPREFIPVAEQTGLILPIGEWLLRSACEELLRWPDGNEGLRLAVNLSPLQVHQ 563 Query: 511 PNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGY 570 + V + + L LE+TE+ + D + V LR L GV + +DDFG GY Sbjct: 564 RDFVDRVRAICDETGFPLRRLDLEITENLLMRDVESVVEKLRTLSRLGVTITIDDFGTGY 623 Query: 571 AGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEA 627 + L +++ LPI LKID+ FV + + +++ II +A L L ++AEGVET+ Sbjct: 624 SS---LGYLQRLPIHALKIDQSFVHAIRENEEKGTLVETIIAMAHGLGLNVVAEGVETKR 680 Query: 628 QRDWLAKAGVGIAQGFLFARPLPIEI 653 Q D+L + G QGF F+ PL Sbjct: 681 QLDYLRRLQCGRMQGFYFSYPLSGHE 706 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 136/440 (30%), Positives = 230/440 (52%), Gaps = 13/440 (2%) Query: 229 QLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTA 284 + L E+ A P++ LPN+ LL+E L Q + R T A++ + + + Sbjct: 128 RRLIETEEQLAYLANYDPLTKLPNRNLLLERLRQTLGRATRTHQDIAILALDLDNFQMIN 187 Query: 285 GVLKEAQREILLLTLVEKLKSVLSP-RMILAQISGYDFAVIANGVQEPWHAITLGQQVLT 343 + + +L + ++L +S +A++SG +F VI + Q +L Sbjct: 188 DGVGHDVGDKVLHEVAQRLTQTVSKIGATVARLSGDEFVVIEESDNLVKDVSEMAQGLLD 247 Query: 344 IMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQ 402 +S + I+ ++ SIG++++ D A L A +A A+ GKN QFF + Sbjct: 248 NLSRSMVIDHHEMVVTASIGISVYPSDGEEAAILLKNADTAMARAKAAGKNTYQFFKAEM 307 Query: 403 MEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGL 462 +AA +RL E+ + L N++ ++ QPQ+E++SG+LV E LLR Q P+ P Sbjct: 308 NKAAFERLMLENQLRKVLSNNELILYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKF 367 Query: 463 IDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELL 521 + E GL+V +G WVL +C+ WQ+ G + +SVN+S+ Q N++ + E L Sbjct: 368 VPVAEEMGLIVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEAL 427 Query: 522 TRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKS 581 + P L LE+TES + + +L ++N GV +A+DDFG GY+ L ++K Sbjct: 428 ADSNLNPIYLELELTESVLMAEESGIFELLTEVQNMGVHIAIDDFGTGYSS---LSYLKR 484 Query: 582 LPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVG 638 P+DVLKID+ FV+ + D+++ AII +A SL L ++AEGVET+ Q +L + Sbjct: 485 FPLDVLKIDRSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCD 544 Query: 639 IAQGFLFARPLPIEIFEESY 658 + QG+ F+RP+ E ++ Sbjct: 545 VIQGYYFSRPICSEKMTQTL 564 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 144/512 (28%), Positives = 257/512 (50%), Gaps = 32/512 (6%) Query: 169 ILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQL---------ALPRLHQD----- 214 +T + + L+ P+ +A E ++ + AL + Q Sbjct: 333 AVTALTGYSVQELLGRPVSFLAPEQTVAESRRQASFSISEKGVWQGEALIKHKQGYTFPV 392 Query: 215 --------DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVV 264 E G + N + +R ++ A ++ LPN+ L LE+ + Sbjct: 393 ALTITTVTGEDGRVECYINTFSDISERKANEARIHDLAHTDTLTGLPNRMSLYSGLEERL 452 Query: 265 ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI 324 A Q +MI+ + + L + LL+ + +L + + ++A++ G +F ++ Sbjct: 453 ANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEFVIV 512 Query: 325 ANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISA 383 + Q + ++VL +++ IE +L SIG+ + D L +A Sbjct: 513 LDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDTA 572 Query: 384 AFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSA 443 + A+ GKN +FF + E +R+ E+ + A+ ++F + QPQV++ +G+++ Sbjct: 573 MYAAKSSGKNNFKFFTEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGM 632 Query: 444 EVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVN 502 E L+R P+ P+ I E C L++ +G WVL E+CR ++ W +G+ + +SVN Sbjct: 633 EALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVN 692 Query: 503 LSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVA 562 +SA QL + + L+ ++I+PG L LE+TES +DDP + ++ L+N GV +A Sbjct: 693 ISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALA 752 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMI 619 +DDFG GY+ L ++K LP+ LKID+ FV+ + P D+++ AA I LA++L L ++ Sbjct: 753 IDDFGTGYSS---LSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLV 809 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 AEGVETEAQ ++L G AQG+ F++PLP Sbjct: 810 AEGVETEAQLEYLRAQGCDSAQGYYFSKPLPA 841 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 138/457 (30%), Positives = 232/457 (50%), Gaps = 16/457 (3%) Query: 218 GMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TA 271 G + R + L +R E A ++ LPN+ L + LEQ + + A Sbjct: 539 GRVTRMIGTHTDLSERKLAEETIRRQANYDSLTQLPNRRLFRDRLEQTIRLAKRDQSSFA 598 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 LM+I + ++ + + LL+ ++++ + +A++ G +F VI V +P Sbjct: 599 LMLIDLDHFKEVNDTMGHDAGDFLLVDAAQRIQHCVRESDTVARMGGDEFVVILPDVNDP 658 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHK 390 + + Q ++T ++ + + SIG+ ++ D + E L A A + A+H Sbjct: 659 DNIERIAQNIITKLAAPFVLGEEKAFISASIGITLYPSDADSMETLLKNADQAMYVAKHL 718 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G+N++ +F P E AQKR+ +D+ +AL ++Q ++ QP VE+ +G + AE L+R Sbjct: 719 GRNRMSYFTPVLQENAQKRMRLVNDLRDALSSNQLRVFYQPIVELATGDIHKAEALIRWL 778 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLM 509 P P I E G+++ +G WVL ++ + Q +SVN S +Q Sbjct: 779 HPTRGMVSPSEFIPLAEETGMIIEIGDWVLRQAMHQVKRLQASHHKGFQISVNKSPVQFH 838 Query: 510 HPN--MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFG 567 + N A+ L L + + +L++E+TE +DD L R+AG++VA+DDFG Sbjct: 839 NDNPLKAAEWLGELEQNGLLASSLVVEITEGVLLDDDGNVKDRLLASRDAGIQVAIDDFG 898 Query: 568 MGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVE 624 GY+ L ++K ID LKID+ FV L D ++ AII++A L L++IAEGVE Sbjct: 899 TGYSS---LAYLKKFDIDYLKIDQTFVNNLGNQSDDMALCEAIIVMAHKLGLKVIAEGVE 955 Query: 625 TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 TE QRD L +AG AQGFLF++ +P E E+ + Sbjct: 956 TEQQRDLLKQAGCDYAQGFLFSKAIPAEELEDLLRQN 992 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 144/462 (31%), Positives = 224/462 (48%), Gaps = 21/462 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARK---- 267 D G++ + + EE A ++ LPN+ LL + L +A Sbjct: 547 RDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLPNRRLLHDRLRVAIASSVRSE 606 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 + AL+ I + + L + LL + ++L S + +A++ G +F V+ Sbjct: 607 RQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGDEFVVMLEN 666 Query: 328 VQE-PWHAI----TLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAI 381 + E P A +G++++ +++ + S+G+ +F G ++L RA Sbjct: 667 LGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSVGITLFGGQQVGIDELMKRAD 726 Query: 382 SAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLV 441 A + A+ G+N ++FFDP+ R E D+ A+ F + QPQV+ SG+++ Sbjct: 727 LAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLAYQPQVD-ASGQVI 785 Query: 442 SAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPL 499 AE LLR Q P I E GL++ +G WVLE +C A W R + Sbjct: 786 GAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAARPGRERFTV 845 Query: 500 SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGV 559 SVN+SA Q N V +L +L R P L LE+TES +D+ +A + L+ GV Sbjct: 846 SVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAKMSALKARGV 905 Query: 560 RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNL 616 +LDDFG GY+ L ++K LP+D LKID+ FV L P D + II LA++L L Sbjct: 906 GFSLDDFGTGYSS---LSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIALARTLGL 962 Query: 617 QMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 +IAEGVE+ Q+D LA G QG+LF+RPL + FE Sbjct: 963 SVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADFEAFL 1004 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 136/460 (29%), Positives = 234/460 (50%), Gaps = 15/460 (3%) Query: 214 DDEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARK---- 267 D G + + + L+ A P++ LPN+ L L+Q + + Sbjct: 686 RDPHGQVTHYVGVFTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREG 745 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 + A++++ + +D + LL + ++L L LA++ G +FA++ + Sbjct: 746 RRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHD 805 Query: 328 VQEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 ++ A L ++L+ +SE E +++ SIG+ ++ T + L A +A + Sbjct: 806 LRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALY 865 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+ +++ + A++RL E+ + AL + Q + QPQV++ SG+++ AE Sbjct: 866 RAKGDGRGVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEA 925 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLS 504 L+R Q P+ P I E GL+ +G WVL E+CR AW + G+ L ++VN+S Sbjct: 926 LVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVS 985 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 Q ++ ++++L + P L LE+TE ++ A+ +L+ LR GV VA+D Sbjct: 986 PRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAID 1045 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L L K PIDVLKID+ F+ +P D + AAII + SL + ++AE Sbjct: 1046 DFGTGYSSLASL---KRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAE 1102 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 GVET Q +L + QGFL +RPLP + FE+ E+ Sbjct: 1103 GVETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLREQ 1142 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 131/457 (28%), Positives = 244/457 (53%), Gaps = 17/457 (3%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALM 273 G+++ +++++ ++ ++ A ++ LPN+AL +L Q ++R AL+ Sbjct: 253 GIVLVFQDISER--KKTEQQLTRLAQYDCLTGLPNRALFTSLLSQAISRSDRRKNKLALL 310 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 + + + L ++LL + ++L+ ++++ G +F VI V H Sbjct: 311 FLDLDRFKQVNDSLGHDVGDLLLQQVAQRLQLATLEGGTVSRLGGDEFMVILEEVNSESH 370 Query: 334 -AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKG 391 A L Q+++T + I ++ SIG+A+ G + L RA A + A+ +G Sbjct: 371 KAAKLAQKMITSLDAPFNILGREVLISTSIGIALCSGSTQCIDSLLKRADMAMYRAKEQG 430 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 +N QF+ + + A K + E+ + +AL+ +F + QPQV+ SG+++ E LLR Q Sbjct: 431 RNNFQFYTAELQQQASKSIELENRLRHALQRKEFFLHYQPQVDTNSGQIIGLEALLRWQP 490 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI---MLPLSVNLSALQL 508 + P+ I E GL+V +G WVL E+C L W G+ + ++VNLS QL Sbjct: 491 DGQALISPEEFIPVAEEAGLIVPIGEWVLREACSQLHRWHRSGLLSPTVKMAVNLSVRQL 550 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 H ++++ + ++L ++P L LE+TE+ + DP V IL + G++++LDDFG Sbjct: 551 EHTSLLSTLTQILQETGLKPSQLELEITETAVMKDPDLVVNILHSIHAMGIQLSLDDFGT 610 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVET 625 GY+ L+++K LP+ VLKID+ F+ + G D +++ +II L+++L+L ++AEGVET Sbjct: 611 GYSS---LRYLKLLPLHVLKIDRSFINDIGGKQRDQAILESIIYLSRNLDLTVVAEGVET 667 Query: 626 EAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 + Q D+L++ QG+ ++P E+ + K Sbjct: 668 QEQLDFLSRFNCHSIQGYYISKPKSAANIEKLLHKNK 704 >UniRef50_Q2S7Q5 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7Q5_HAHCH Length = 832 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 146/529 (27%), Positives = 256/529 (48%), Gaps = 32/529 (6%) Query: 162 IYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAK----ELVGHQLALPRLHQDDEI 217 + L+L L+ + I ++ ++ P+ + + + + + L + DEI Sbjct: 298 LTLVLILVTSALIFSVVHGQLIKPISRVTQLAHLLGESHAETPPEAARDFQSTLRRRDEI 357 Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALM 273 G L R++ L+ + A ++ L N+ L + +A L+ Sbjct: 358 GELARAFKSMDGNLRATASKLTFIAYHDSLTGLANRHTFGAFLHRAIAEAARHHFRLGLL 417 Query: 274 IITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILA---------------QISG 318 I + +D L +++L + ++L +VL ++A +I G Sbjct: 418 YIDIDGFKDVNDSLGHEAGDLVLKEISQRLHNVLRAEDMVADMSAQYEAMEATKMSRIGG 477 Query: 319 YDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLY 377 +FA++ N + P + +++L M IE S+G+A++ D A +L Sbjct: 478 DEFAIVVNHLHSPMDISHIVKRLLDAMQAPFQIESHSFLLGASVGIAVYPEDGKDAHELL 537 Query: 378 SRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTS 437 A A + ++ +G+N ++FD + A +R SDI +AL+ QF ++ QPQV + Sbjct: 538 KCADIAMYHSKRQGRNGFEYFDTKMNHMAVERHQIISDIRSALQKGQFELYYQPQVSALA 597 Query: 438 GKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM- 496 G ++ E LLR + P+ + P I E G ++ +G WVLEE+CR WQ +G+ Sbjct: 598 GNVMGCEALLRWRHPERGFVSPVEFIPIAEETGQIIEIGRWVLEEACRQCREWQAQGLDE 657 Query: 497 LPLSVNLSALQLMHP-NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 + +SVN+SA+Q ++VA E L + P L LE+TE+ + V L L+ Sbjct: 658 IRMSVNISAVQFSSSTDIVAVTREALAHSGLPPDCLDLEITETAMMQSDKVGVDKLNALK 717 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQ 612 N GV +++DDFG GY+ L L + LPID LKIDK FV+ + DS ++I AI+ LA+ Sbjct: 718 NLGVSISMDDFGTGYSSLASL---RDLPIDQLKIDKSFVDKINHDSQGRAIIKAILALAK 774 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 L+++++AEGVE Q D+L+ + QG+ A+PLP + + + Sbjct: 775 ELSIEVVAEGVEERTQLDFLSLHRCDLIQGYYVAKPLPADGMRDFLRQH 823 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 123/458 (26%), Positives = 226/458 (49%), Gaps = 14/458 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPVSDLPNKALLMEMLEQ----VVARK 267 ++ G + + + + E A ++ LPN+ L + LE + Sbjct: 282 RNQAGEVENYIGIFSDISESKATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHR 341 Query: 268 QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 + A+ I + + L + + LL + ++L+ + +A++ G +F VI Sbjct: 342 KQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILAD 401 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFT 386 + + + ++VL + + + I+ + SIG+A++ + E L A A + Sbjct: 402 ISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALYPDNGNDVETLTKNADMAMYR 461 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G+ +FF + + +RL+ ES + +A+ + ++ QP++ M SG +V E L Sbjct: 462 AKESGRGNYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYYQPKLNMQSGIMVGMEAL 521 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW-QERGIMLPLSVNLSA 505 +R Q DGS P I E GL+V +G V+ ++ A W +E G+ L ++VNLSA Sbjct: 522 VRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRETGMNLRVAVNLSA 581 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 + P +V ++ + L + +E+TES + D A+A L + G+ +A+DD Sbjct: 582 REFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAIATLEQISRLGIHIAMDD 641 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K PI LK+D+ FV+ +P D + ++AAI+ LA+ LNL+++AEG Sbjct: 642 FGTGYSS---LSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKVLNLKVVAEG 698 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 VET+ Q +L + QG+ F++PL F + Sbjct: 699 VETQEQLSFLRQNLCDECQGYSFSKPLSAVDFTAFLAD 736 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 636 bits (1641), Expect = 0.0, Method: Composition-based stats. Identities = 164/592 (27%), Positives = 283/592 (47%), Gaps = 61/592 (10%) Query: 120 ISLGVYSLERPANPQPIAYLVLQADS-------FRMYKFVMSTLSTLVTIYLLLSLILTV 172 L E I YL L + +V++ T + L+LSL LT Sbjct: 156 FLLAATRPEAGKIRHVIGYLHLAVNQRGLLLEVLPSIAWVVAACVTFAVLCLMLSLSLTR 215 Query: 173 AISWCINRL-----------ILHPLR--------NIARELNAI-------PAKELVGHQL 206 I+ I+RL + P++ IA LN + + V HQL Sbjct: 216 RITSPISRLAKLADGIASGKLEEPVKVTGGGEVEEIAAILNGVITGISNYKKEMDVDHQL 275 Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLPNKALLMEMLEQVV 264 ++ + + R+ LN + Q R + A ++ LPN+ L E L ++ Sbjct: 276 LSMKVEERT-SQLSKRNQELNTAVKQVTRTKNRLRKMAYYDALTSLPNRRLFTEQLSLLL 334 Query: 265 ARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILA------ 314 Q AL+ + + + L + ++LL + ++L + ++A Sbjct: 335 KLAQRNKQTLALLFLDLDNFKRINDSLGHSAGDLLLREVGQRLSKCVRDSDVVAHYADPT 394 Query: 315 ------QISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 ++ G +F V+ N + P + ++++ +SE + I+ +L SIG+A+ Sbjct: 395 AKIDVSRLGGDEFTVVLNDLDAPESVGVVAERLILALSEPMLIDGHELVITPSIGIAIAP 454 Query: 369 GDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 E L + +A + A+ GK+ ++ EA RLT E+D+ A++N + + Sbjct: 455 EHANEVEGLLRCSDTAMYHAKASGKSTYLVYESSMEEAGLDRLTLENDLRKAMDNDELVL 514 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 + QPQV+ SGK+V AE LLR P+ P I E GL+ +G WV+ E+C+ + Sbjct: 515 FYQPQVDTRSGKVVGAEALLRWMHPEQGLIPPFKFIPLAEEMGLIGEMGDWVIREACKQV 574 Query: 488 AAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 + ++G+ LP ++VN+SALQ P+ + +L + P TL LE+TE + D +A Sbjct: 575 QTFAKKGVSLPKVAVNVSALQF-TPSFTRRVKSILDELAVDPATLELELTEGVVMGDTNA 633 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV---EGLPGDSSM 603 +V L L++ GV +++DDFG GY+ L ++ P+D LKID+ FV +S+ Sbjct: 634 SVQALAELKDLGVSLSIDDFGTGYSS---LSYLSRFPLDELKIDRSFVIEANNSEQGASL 690 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 + AII +AQSL L+++AEGVET+ Q +++ AG + QG++F++P+P E E Sbjct: 691 VRAIIAMAQSLGLELVAEGVETDEQYEFMTTAGAHVIQGYMFSQPVPAEKLE 742 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 636 bits (1641), Expect = 0.0, Method: Composition-based stats. Identities = 134/448 (29%), Positives = 220/448 (49%), Gaps = 14/448 (3%) Query: 226 LNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARK----QTTALMIITCET 279 L + + +R EQ A ++DLPN+ L ++ L Q +A + A++ + + Sbjct: 284 LFEDITERRKSEQQIQHMAYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFLDLDR 343 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 +D L + + LL+ + +L + LA++ G +F VI + + +A + Q Sbjct: 344 FKDINDTLGHSAGDQLLIQVTRRLGRQIRSCDTLARLGGDEFVVIVTDLGKKMNATRVAQ 403 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFF 398 ++ + I +L SIG+A+F D AE L A A ++++ G+N+ F+ Sbjct: 404 DLINAIQPPFLIAGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNRYNFY 463 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 + A R+ E+ + NALE +F + QP + +V+AE L+R P Sbjct: 464 SASMNQKALMRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRWNHPTRGRIP 523 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADM 517 PD ID E GL+V +G WVL C + W + G+ L SVN+S+ Q+ + + Sbjct: 524 PDQFIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQIERQDFAEIV 583 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 L L +E+TES I ++ L L+ GV A+DDFG GY+ L Sbjct: 584 RNALRESGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFGTGYSS---LG 640 Query: 578 HMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K+LPID +KID+ FV + D +++ AII ++Q L ++ IAEGVET Q +L + Sbjct: 641 YIKTLPIDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRFLQE 700 Query: 635 AGVGIAQGFLFARPLPIEIFEESYLEEK 662 G QG+ F RPL E EE ++ Sbjct: 701 RGCEEIQGYYFHRPLSAEALEELLRAQE 728 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 636 bits (1641), Expect = 0.0, Method: Composition-based stats. Identities = 121/454 (26%), Positives = 225/454 (49%), Gaps = 13/454 (2%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQT 269 D +G ++ ++ Q+ ++ E+ +A ++DLPN+ LL++ L Q + + Sbjct: 485 DKVVGEVITFKDITQR--KQLEEKIKYHAYFDSLTDLPNRVLLIDRLTQGLKYAKVNGEK 542 Query: 270 TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ 329 A++ + + + L + ++LL ++ ++L + + +++ G +F + ++ Sbjct: 543 LAVLYLDLDRFKLVNDSLGHSYGDLLLQSVAKRLSACVPEDATVSRQGGDEFTIYLPNIK 602 Query: 330 EPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTAR 388 + + + S+ + ++ SIG+++F + E L A +A + ++ Sbjct: 603 CENDILKVINCINASFSQPFNLIDNEIYIKTSIGISLFPKNGDTTETLIKNADTAMYKSK 662 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 FF + + E+D+ ALE + I+ QPQ+ + K+ E LLR Sbjct: 663 ETPGTSYHFFSEGMDTRTFESIKLENDLYKALERDELIIFYQPQINYKTNKIKGVEALLR 722 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQ 507 + PD I E GL+V +G WVL+E+C+ L W +G L +SVNLS Q Sbjct: 723 WNHREHGMITPDRFIPLAEETGLIVPIGEWVLKEACKQLKEWHNQGYPLISMSVNLSVHQ 782 Query: 508 LMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFG 567 N+ + + +L + P L LE+TE+ + + + + L GV +A+DDFG Sbjct: 783 FEQNNLFSIIENVLYETDLSPEYLQLELTENLIVKNTEVTLKTMTQLNGLGVNLAIDDFG 842 Query: 568 MGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD--SSMIAAIIMLAQSLNLQMIAEGVET 625 GY+ L ++K+LPI LKIDK FV+ + D +++ II LAQ+L L++IAEGVET Sbjct: 843 TGYSS---LGYLKNLPISTLKIDKSFVQEMLTDDAAAITNTIITLAQNLKLEVIAEGVET 899 Query: 626 EAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 + Q D+L + + QG+ F++P+ + Y Sbjct: 900 KEQADYLLEQNCHLMQGYFFSKPMKAGEIMKKYF 933 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 135/478 (28%), Positives = 237/478 (49%), Gaps = 19/478 (3%) Query: 198 AKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKAL 255 + G Q++ + D G ++ + + Q + + ++ + A ++ LPN+ L Sbjct: 529 SGRDYGVQISAAPIAGRD--GRVLGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVL 586 Query: 256 LMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM 311 + + Q + A++ + + + L A + LL + ++L L Sbjct: 587 FQDRVHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASD 646 Query: 312 ILAQISGYDFAVIANGVQEPW--HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG 369 + ++ G +F V+ + + + + +++L +++ + ++ S+G+A+F G Sbjct: 647 TICRLGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPG 706 Query: 370 DL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIW 428 D + L RA +A + ++ +G+N+ FF +AA RL E+D+ AL QF + Sbjct: 707 DGEDPDTLMKRADAAMYRSKREGRNRYHFFSKAVDDAASARLQLEADMRRALAAGQFIVH 766 Query: 429 LQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLA 488 QP V + V+ E LLR + P I E GL+V +GHWVL ++C L Sbjct: 767 YQPVVHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLR 826 Query: 489 AWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 AW + + ++VN+S +QL + V + ++L + L E+TES + DP A Sbjct: 827 AWSGTALGGISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEAT 886 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMI 604 + +LR L+ GVR+A+DDFG GY+ L H+K P+D LKID FV L D ++ Sbjct: 887 LEMLRRLKGLGVRIAIDDFGTGYSS---LGHLKRFPVDTLKIDHTFVRDLEADADDRELV 943 Query: 605 AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 AI+ +A+SL L ++AEGVETEAQ LA QG+LFARP ++L+++ Sbjct: 944 RAILAMARSLRLHVVAEGVETEAQAAILAAMECPAFQGYLFARPAGA-AVTAAWLQDR 1000 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 130/443 (29%), Positives = 229/443 (51%), Gaps = 13/443 (2%) Query: 221 VRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTA----LMIIT 276 + ++ L+ + + + ++ LPN+ L + L + R + ++ ++ I Sbjct: 509 LTRQQQAEERLEEKKQLLDHMSNHDSLTGLPNRRLFQDRLYHAIERARRSSSEMSVLFID 568 Query: 277 CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAIT 336 + + L + LL+++ +++S L LA++ G +F VI A Sbjct: 569 LDRFKKINDSLGHELGDKLLISVARRMQSHLRRSDTLARLGGDEFVVILEESSHSHFAAV 628 Query: 337 LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQI 395 + + +L +SE +E +L SIG++ + D L S A +A + A+ +G+N Sbjct: 629 IARNLLNELSEAFDVESHRLFVTASIGISRYPYDAEDVVGLMSSADAAMYHAKSRGRNNF 688 Query: 396 QFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGS 455 QF+ P+ AQ L E+ + +AL QF ++ QPQ +M LV AE LLR P+ Sbjct: 689 QFYAPEMNGRAQDFLEMETQLRDALALEQFEVYYQPQYDMRDQTLVGAEALLRWNHPERG 748 Query: 456 WDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMV 514 P I E G +V +G WVL + CR W + G+ + ++VN+S Q N+ Sbjct: 749 MVPPGDFIALAEETGAIVPIGEWVLMQVCRQNRQWMDEGLTPVRVAVNISIAQFR-SNLS 807 Query: 515 ADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLR 574 + ++L + + L LE+TES ++D + +L L+ G+ +++DDFG GY+ Sbjct: 808 QTLEQVLEQSGMPAELLELEITESMLMEDEEETITLLNELKEKGLHISIDDFGTGYSS-- 865 Query: 575 QLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDW 631 L +++ LP+D LKID+ F+ + D+++ +II L Q+++L+++AEGVE E QRD+ Sbjct: 866 -LSYLRKLPVDKLKIDRSFIAHVVHNQSDAAITGSIIALGQNMDLRILAEGVEHEEQRDF 924 Query: 632 LAKAGVGIAQGFLFARPLPIEIF 654 L + IAQGFL+ARP+ E F Sbjct: 925 LLQHRCYIAQGFLYARPMTAEDF 947 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 138/466 (29%), Positives = 242/466 (51%), Gaps = 28/466 (6%) Query: 218 GMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT-----AL 272 G+ + + +++++ ++ E + A P+++LPN+ M L +V+ R A+ Sbjct: 258 GIAITARDISER--KQKEAELHRQAFYDPLTELPNRTYFMNRLTKVLERAGRRQDFHYAV 315 Query: 273 MIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPW 332 + + + L + L + +L S L ++A++ G +FA++ + P Sbjct: 316 FFLDLDRFKVVNDSLGHLLGDEFLKAIARRLSSCLREEDMVARLGGDEFAILLEELSNPD 375 Query: 333 HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM---FYGDLTAEQLYSRAISAAFTARH 389 + +++ ++S +++ +L SIG+A+ +Y E + A A + A+ Sbjct: 376 IVHRIAERLQRVLSAPFTLKQHELFTTASIGIALGTSYYE--QPEAILRDADIAMYQAKT 433 Query: 390 KGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRI 449 +GK + FD A KR ESD+ A+E +F + QP V + + +L+ E L+R Sbjct: 434 QGKARHIIFDQAMHTRAVKRWQLESDLRWAIERREFCLVYQPIVSIQTERLIGFEALVRW 493 Query: 450 QQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG-------IMLPLSVN 502 P W P I E GL++ +GHWVL E CR L WQ + L +SVN Sbjct: 494 HHPQRGWISPAEFISVAEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVSVN 553 Query: 503 LSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVA 562 LS+ Q P+++ + ++L + ++ L LE+TES +++ A ++L L+ G+++A Sbjct: 554 LSSKQFCQPDLIHYIQQVLQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGIQLA 613 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMI 619 LDDFG GY+ L ++ P+DVLKID+ F+ G+ + ++ I+ LA+SLNLQ++ Sbjct: 614 LDDFGTGYSS---LSYLHRFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVV 670 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPLPI---EIFEESYLEEK 662 AEGVET+AQ D L G AQG+L +RPL E F + YL+ + Sbjct: 671 AEGVETQAQLDHLQALQCGYAQGYLISRPLTPEKTEQFLQEYLQSR 716 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 787 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 779 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 771 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 768 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 763 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 747 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 747 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 746 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 745 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 745 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 744 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 743 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 742 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 742 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 741 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 741 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 739 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 739 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 739 0.0 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 737 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 736 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 734 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 733 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 733 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 732 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 732 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 731 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 730 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 729 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 728 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 728 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 726 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 725 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 724 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 724 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 723 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 723 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 722 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 722 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 720 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 720 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 720 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 719 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 719 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 718 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 718 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 717 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 717 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 716 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 716 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 716 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 715 0.0 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 714 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 714 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 714 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 713 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 712 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 712 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 712 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 711 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 711 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 710 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 710 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 710 0.0 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 709 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 709 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 709 0.0 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 708 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 708 0.0 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 708 0.0 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 707 0.0 UniRef50_Q2SDG6 Predicted signal transduction protein containing... 707 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 707 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 706 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 704 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 704 0.0 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 704 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 703 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 703 0.0 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 703 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 702 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 702 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 702 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 701 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 700 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 700 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 700 0.0 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 700 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 699 0.0 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 699 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 699 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 699 0.0 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 698 0.0 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 698 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 698 0.0 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 698 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 697 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 696 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 696 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 695 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 694 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 694 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 694 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 693 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_P37649 Protein yhjK n=86 Tax=Enterobacteriaceae RepID=Y... 693 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 693 0.0 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 692 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 692 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_B4SWG2 Protein YhjK n=42 Tax=Enterobacteriaceae RepID=B... 692 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 692 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 691 0.0 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 691 0.0 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 690 0.0 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 690 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 689 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 687 0.0 UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=c... 687 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 686 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 686 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 686 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 685 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 685 0.0 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 685 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 685 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 684 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 684 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 684 0.0 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 684 0.0 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 684 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 684 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 684 0.0 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 683 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 683 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 683 0.0 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_A3Y8Y9 C-di-GMP phosphodiesterase A-related protein n=1... 682 0.0 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 682 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 682 0.0 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 682 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 681 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 680 0.0 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 680 0.0 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 680 0.0 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 680 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 680 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 679 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 678 0.0 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 678 0.0 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 677 0.0 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 677 0.0 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 676 0.0 Sequences not found previously or not previously below threshold: >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 139/482 (28%), Positives = 246/482 (51%), Gaps = 17/482 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDL 250 N ++L + + D G++ + + + R+ E+ A P++ L Sbjct: 411 RNYRKDGSPFWNELFIAPVRDRD--GVVTNYIGVMNDITEHRRYEEQLVYQATHDPLTGL 468 Query: 251 PNKALLMEMLEQVVA-----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS 305 PN+ LL + L Q +A R+ +M + + + L ++LL + +LK+ Sbjct: 469 PNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKN 528 Query: 306 VLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 L +A++ G ++ ++ V+E IT+ ++++ + + L + ++ SIG+A Sbjct: 529 CLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIA 588 Query: 366 MFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 +F D T + L A +A + A+ +GKN QF+ + +RL+ E+ + A++N + Sbjct: 589 LFPTDGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKNQE 648 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 F + QP+V++ +G++ E L+R P+ P I E GL+V +G WVL +C Sbjct: 649 FLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTAC 708 Query: 485 RLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 AWQ+ G+ L ++VNLSA Q N++A + E+L + P L LE+TES + + Sbjct: 709 AQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQE 768 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGD 600 + AILR L + G+ VA+DDFG GY+ L ++K PI LKID+ F+ + P D Sbjct: 769 AEKSAAILRELTDRGIEVAIDDFGTGYSS---LSYLKRFPIANLKIDQAFIRDMTRDPDD 825 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++++ II +A L ++ IAEGVE Q D+L + QG+ F+RP+ E + Sbjct: 826 ATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLLAD 885 Query: 661 EK 662 K Sbjct: 886 GK 887 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 779 bits (2014), Expect = 0.0, Method: Composition-based stats. Identities = 135/451 (29%), Positives = 229/451 (50%), Gaps = 14/451 (3%) Query: 223 SYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIIT 276 Q+L +R E A +++LPN+ L + L + + A+M + Sbjct: 495 YQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLD 554 Query: 277 CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAIT 336 + + L + LL + ++ +L +A+I G +F ++ + + +A Sbjct: 555 LDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASI 614 Query: 337 LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQI 395 + +++ ++ I + SIG+A++ D AE L A +A + A+ G+N Sbjct: 615 VADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNY 674 Query: 396 QFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGS 455 QF+ P +R E+++ AL+ +F I+ QPQVE+ +GK+V E L+R Q P Sbjct: 675 QFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRG 734 Query: 456 WDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMV 514 P I E GL++ +G W+L +C AWQ+RG + ++VNLSA Q + P++ Sbjct: 735 MISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLP 794 Query: 515 ADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLR 574 + +L + P L LE+TES + D L LR G+ +A+DDFG GY+ Sbjct: 795 QYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSS-- 852 Query: 575 QLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDW 631 L ++K LPID+LKID+ F+ L D ++I+AII L +L ++++AEGVET+ Q + Sbjct: 853 -LNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMF 911 Query: 632 LAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 L + + QG+LF +PLP+ E+ YL Sbjct: 912 LRQQQCDLMQGYLFTKPLPVRELEQKYLSNN 942 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 147/676 (21%), Positives = 282/676 (41%), Gaps = 35/676 (5%) Query: 10 KQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEA 69 + + + +++ F + + ++ R L+ + G E Sbjct: 293 RLTGWTIVATSLLAILAGSMVAFFTSRSITRSVKGCMDFAGRLAGGDLAVRMEAGGDNEF 352 Query: 70 EAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLER 129 + AD + ++ ++ + T + E + + + Sbjct: 353 -----GRLATALNCMADELQGHRLLQEERTAELAGANSALETEIAEH--RDAEEALRQRQ 405 Query: 130 PANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA-----------ISWCI 178 A +++ + + + S +L + + Sbjct: 406 RAIDSSSNGIMITDALELDHPIIYVNPAFERITGYAASEVLGRNPRLLCSGDREQLGLEV 465 Query: 179 NRLILHPLRN-IARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--Y 235 R+ L LR A N L + L++ + + G + + + +R Sbjct: 466 IRVALCELREGHAELRNYRKDGSLFWNALSVSPVL--NAAGEVTNYVGIVNDITERKRYE 523 Query: 236 EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQ 291 E+ + ++ LPN+ LL + + Q + + TA+ I + + L Sbjct: 524 EQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDM 583 Query: 292 REILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPI 351 + LL +L + +A+ G +F ++ + + A + +++ + I Sbjct: 584 GDKLLQIAARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQI 643 Query: 352 ERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRL 410 +L CS G++++ D A+ L A A + A+ G+N QF+ + RL Sbjct: 644 GEHELVVSCSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARL 703 Query: 411 TEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCG 470 T E + ALE +F + QP+V++ SG++ E L+R Q P+ + P I E G Sbjct: 704 TMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETG 763 Query: 471 LMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPG 529 L+V +G WVL +C AWQ+ G+ + ++VNLS Q ++ + + + P Sbjct: 764 LIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPR 823 Query: 530 TLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKI 589 + LEV ES +DD AVA+L L+ GV++ +DDFG GY+ L ++K P D++KI Sbjct: 824 YIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSS---LSYLKRFPFDMMKI 880 Query: 590 DKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFA 646 D+ FV + D ++++ +I LA +LNL+++AEG+ETE Q +L QGF F+ Sbjct: 881 DQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFS 940 Query: 647 RPLPIEIFEESYLEEK 662 RP+P FE+ +++ Sbjct: 941 RPVPAAEFEQMLRDQR 956 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 768 bits (1984), Expect = 0.0, Method: Composition-based stats. Identities = 163/632 (25%), Positives = 287/632 (45%), Gaps = 37/632 (5%) Query: 56 PLSSAILKGDIPEAEAILASIKPAGVVSRADVV--LPNQFQALRKSFIPERPVPVMVTRL 113 SSA+ + +++++I +V R+ + L + A ++ + + + Sbjct: 326 NSSSALWAFLVGLLLSVVSAIYVQLIVDRSRRIQLLVDDRTAQLRTVNDDLIADIAARKH 385 Query: 114 FELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA 173 E +Q+ A +++ Y + L Sbjct: 386 AEHELQLRERAIEASANA-------IIIARAVAPDYPLEYVNPAFTRITGYSPEEALGRN 438 Query: 174 ISWCINRLILHPLRNIAREL------------NAIPAKELVGHQLALPRLHQDDEIGMLV 221 I + + P R + N L L + + D+ G + Sbjct: 439 IGFLWGKDWEQPGIEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPV--KDDTGEVS 496 Query: 222 RSYNLNQQLL--QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMII 275 + +R+ E R ++ L N++LL + L Q ++ + + Sbjct: 497 HFVVALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFV 556 Query: 276 TCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI 335 + + L ++LL + E+L+ + ++++ G +F +I + + Sbjct: 557 DLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDAGLST 616 Query: 336 TLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQ 394 + Q+++ +++ L IE + SIGVA++ D T E+L A A + A+ G+N Sbjct: 617 GIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRNN 676 Query: 395 IQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDG 454 QF+ E A +RL E D+ NA+E +F + QPQ+++ +GK+V E L+R Q P+ Sbjct: 677 FQFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPEL 736 Query: 455 SWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNM 513 P I E GL+V +G WV+ E+CR WQE G+ L +SVNLSA Q ++ Sbjct: 737 GMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDL 796 Query: 514 VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL 573 + + L ++ P L +E+TES + D A+ ILR L+ GV++++DDFG GY+ Sbjct: 797 LESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSS- 855 Query: 574 RQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRD 630 L ++K PIDVLKID+ FV + P D++++A+II LA SL L +IAEGVETE Q Sbjct: 856 --LSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLA 913 Query: 631 WLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +L + QG+ F+RP+ + E ++K Sbjct: 914 YLQQHDCDQIQGYFFSRPITADAMEVMLKDDK 945 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 763 bits (1972), Expect = 0.0, Method: Composition-based stats. Identities = 142/513 (27%), Positives = 246/513 (47%), Gaps = 20/513 (3%) Query: 161 TIYLLLSLILTVAISWCINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDE 216 I L S++ I LR + + N + E L++ ++ D Sbjct: 603 IIGKLPSVMQAGLHEAAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWLSISQV--ADA 660 Query: 217 IGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----T 270 G + + + QR E A ++ LPN+ALL E ++Q + R Q Sbjct: 661 KGSVQNYVAVFTDITQRKLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAI 720 Query: 271 ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE 330 A++ I + + L ++LL ++LK L +A+ G +F V+ + Sbjct: 721 AVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGD 780 Query: 331 PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARH 389 + T+ ++++ +++ + +L SIG++++ D L A +A + A+ Sbjct: 781 TDYLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKE 840 Query: 390 KGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRI 449 GKN +F+ + + + LT E+++ A+E ++F + QP+V++ S K++ AE ++R Sbjct: 841 SGKNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRW 900 Query: 450 QQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQL 508 Q P+ P I E GL++ +G W++ ESCR WQ+ G + ++VNLSA Q Sbjct: 901 QHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQF 960 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 + + + LT + P L LE+TES + + A +L+ + G V +DDFG Sbjct: 961 RDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGT 1020 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVET 625 GY+ ++K PID LKID+ FV +P D ++ AII +A SL ++++AEGVET Sbjct: 1021 GYSSFG---YLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVET 1077 Query: 626 EAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 + Q +L K G QGFLF+ PL F Sbjct: 1078 QEQLAFLKKQGCDQIQGFLFSEPLHSHDFVRML 1110 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 747 bits (1931), Expect = 0.0, Method: Composition-based stats. Identities = 147/547 (26%), Positives = 261/547 (47%), Gaps = 38/547 (6%) Query: 139 LVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHP--LRNIARELNAI 196 L + DS + ++ + + Y + ++LT I+HP L+ I Sbjct: 371 LQIITDSSHLA--YVNKRAAEIVGYSVEEMLLTTI------ETIIHPDHLQMIIERKAKT 422 Query: 197 PAKELVGHQLALPRLHQDDE-------------IGMLVRSYNLNQQLLQRH--YEEQNEN 241 A E V Q + H++ G V + + + R +E + Sbjct: 423 DAGEFVPKQFEIMLAHRNGSCVPVEVTTARTIWQGKQVE-LAIVRDITDRKKAEDEIQQL 481 Query: 242 AMRFPVSDLPNKALLMEMLEQ----VVARKQTTALMIITCETLRDTAGVLKEAQREILLL 297 A ++ LPN++LL + L Q V + A+M + + + L + LL Sbjct: 482 AYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLA 541 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 T+ E+L + +A+I G +F +I + ++ + +++L +S+ L + ++ Sbjct: 542 TVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIF 601 Query: 358 PHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG+A++ D + L A A + A+ +GKN Q+F + A + L E+ + Sbjct: 602 ITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSL 661 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 ALE ++F I+ QPQ+++ SG+LV E L+R Q PD P I E GL++ +G Sbjct: 662 RRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIG 721 Query: 477 HWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 W L+ +C AW + G L ++VNL +Q + + +L + + P L LE+ Sbjct: 722 EWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELEL 781 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES + + +L L+ GV +A+DDFG GY+ L ++K+ PI+ +KID+ F+ Sbjct: 782 TESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSS---LSYLKNFPINRVKIDRSFIR 838 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + P D+++++AII +A +LNL++ AEGVE +Q ++L+ QG+L + PLP Sbjct: 839 DVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEA 898 Query: 653 IFEESYL 659 F Sbjct: 899 EFTRFLR 905 Score = 59.6 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 16/186 (8%) Query: 68 EAEAILASIKPAGVVSRADVVLPNQ----FQALRKSFIPERPVPVMVTRLFELPV---QI 120 + L + + V L + K+ I R VPV + RLF+ + + Sbjct: 173 LGQNFLEDLSHTRIGKTGYVYLFDNHRTIIAHPEKNRIMHRDVPVGINRLFDKSIAGFEG 232 Query: 121 SLGVYSLERPANPQPIAYLV----LQADSFRMYKFV--MSTLSTLVTIYLLLSLILTVAI 174 S + R +L + A S+ + + + T + + +T+ Sbjct: 233 SGETRNSRRIETLSSFKHLKTTDWILAASYPIVEAYAPLKTNRIYFITVMAVGTSVTLLF 292 Query: 175 SWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH 234 W + + + PL I R + AIP K + + L L + DE+G L+ ++N L +H Sbjct: 293 VWFLMQRLTSPLSLITRHVEAIPDKSGLHN---LINLERKDELGTLINAFNSMILSLDQH 349 Query: 235 YEEQNE 240 E Sbjct: 350 QNALRE 355 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 134/436 (30%), Positives = 222/436 (50%), Gaps = 13/436 (2%) Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLK 288 R E + A ++ LPN+ L + L Q +A Q A+M + + + L Sbjct: 187 RAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKLINDTLG 246 Query: 289 EAQREILLLTLVEKLKSVLS-PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 A + LL+ + ++L++ +A+ G +F + + + + A T+ Q+++ + Sbjct: 247 HAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQKIIDVFRT 306 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 I+ +L SIG++++ D + + L A A + A+ +G+N Q F P+ A Sbjct: 307 PFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQLFAPEMNARA 366 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +RL+ E+D+ ALE +F + QP+V + G++ E L+R Q P P I Sbjct: 367 FERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLA 426 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+V +G WVL +C+ AWQ+ G + ++VNLS QL ++ + +L Sbjct: 427 EETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVLAETG 486 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + PG L++EVTES +DD + R L GVR+++DDFG GY+ L ++K P+ Sbjct: 487 LAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSS---LHYLKKFPVH 543 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV + P D ++ A+I +A+ LNL ++AEGVET Q + L QG Sbjct: 544 TLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQG 603 Query: 643 FLFARPLPIEIFEESY 658 FLF+ P P E F Sbjct: 604 FLFSEPAPAEQFTPVL 619 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 124/481 (25%), Positives = 225/481 (46%), Gaps = 21/481 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N E+ L + + D+ G + + + + +R E A ++ LP Sbjct: 394 NRRKNGEIYPEWLTINVI--RDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALP 451 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L + L+ +A A+M + + + L + +L+ ++ + Sbjct: 452 NRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCV 511 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F V+ + L ++V+ + + ++ +L SIG+A++ Sbjct: 512 REGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVY 571 Query: 368 YGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D T E L A +A + A+ G+N Q + + +RLT ES + +AL +F Sbjct: 572 PEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNARSFERLTMESSLRHALTREEFR 631 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + Q +V+ G++ E L+R P+ P I E G++ +G WVL +CR Sbjct: 632 LVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQ 691 Query: 487 LAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 W + G+ + ++VN+SA Q + ++ + L + P L LE+TE+ + Sbjct: 692 CKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELELTETVLMQRVD 751 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-------- 597 VA+L+ LR GVR+++DDFG GY+ L ++K +PID LK+D+ FV + Sbjct: 752 EVVAVLKSLRAMGVRISIDDFGTGYSS---LSYLKRMPIDALKVDRSFVNDIFDGQSKVT 808 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 + +++ II LA +L L+ IAEGVET Q ++L G QG+L +RP+ E Sbjct: 809 EDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGEDLISL 868 Query: 658 Y 658 + Sbjct: 869 F 869 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 161/630 (25%), Positives = 281/630 (44%), Gaps = 40/630 (6%) Query: 54 REPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRL 113 R P++ + D E + I A V+ V+ + + L +SF+ + L Sbjct: 339 RCPITDLQQELDNEERDLIRADGSRLPVIKTVSRVVLDGREHLLESFVDISRRKQVENSL 398 Query: 114 FELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA 173 E + + V + A LV++ D FV + L L + Sbjct: 399 KESEERYRMLVENQ---------ADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALL 449 Query: 174 ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQD------------DEIGMLV 221 + + A + + + ++ L + ++ G Sbjct: 450 PVIMLPEQL-----ATAAGMEQMICSDTSYYREYLSPTREGKRWIGWALRCIFNQSGQAE 504 Query: 222 RSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMII 275 + + + R E + A PV+ LPN+ LL + L+ + R + A++ + Sbjct: 505 AIIGMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFL 564 Query: 276 TCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI 335 + + L A + LL + +L + +A++ G +F V+ + + Sbjct: 565 DLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVG 624 Query: 336 TLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQ 394 ++ ++L + E I+ ++ SIG+++F D AE+L A A + A+ G+N Sbjct: 625 SVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNT 684 Query: 395 IQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDG 454 FF P+ A +RL ES + ALE +F + QPQ+E+ SG + E LLR + PD Sbjct: 685 CHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDL 744 Query: 455 SWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSALQLMHPNM 513 P+ I E GL+V +G WVL E+CR WQ+ G L ++VN+SA Q N+ Sbjct: 745 GVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNL 804 Query: 514 VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL 573 + ++L + P L LE+TES +++P A+ LR L+ G+ +++DDFG GY+ Sbjct: 805 GLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSS- 863 Query: 574 RQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRD 630 L H+K PID LKID+ FV+ + D+++ AII LA S+ L ++AEG+E Q + Sbjct: 864 --LSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQME 921 Query: 631 WLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++ + QG+ +RP+ E F Sbjct: 922 FMHQRHCDTMQGYYLSRPVTAEEFGTFLKR 951 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 171/658 (25%), Positives = 292/658 (44%), Gaps = 36/658 (5%) Query: 26 FCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRA 85 + H + ++ + IA ++A+ E +L + A Sbjct: 435 SGAPQVVHDIHRHPQ--LQRWRRIAAERGFKAAAALPLRSDGETYGVLCLVSVDPQAFDA 492 Query: 86 DVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADS 145 D V L + + R Q++ + R A ++ AD Sbjct: 493 DEV------ELLAELADDIAFGIRTLRARVEQQQLAATLELRNRAIEESTNAIVISHADR 546 Query: 146 FRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHP----LRNIARE--------L 193 + + VT +L + I+ P LR RE Sbjct: 547 AADNPIIYVNPAFTVTTGYGADEVLGRNARFLIDNDWDQPAVERLREAVREGGDARVTLR 606 Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDLP 251 +L+ ++++L + D G + + + +R + E + A ++ L Sbjct: 607 TYHKDGQLLWNEISLASI--RDAQGEVSHFIAIFNDVTERVRYEAELEQQATHDALTGLA 664 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL + +++ + R A+M++ + + L A + LL +L + + Sbjct: 665 NRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASV 724 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F V+ + + A L +VL ++E + + ++ SIGV+++ Sbjct: 725 RRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLY 784 Query: 368 YGDLTAE-QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D A L A A + A+ G+N+ QF+ P+ E +RL E+ + ALEN + Sbjct: 785 PRDGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALENDELE 844 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP+V + G+++ AE L+R + P P I E GL+V +G WV++ +CR Sbjct: 845 LHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACRQ 904 Query: 487 LAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 L AW + G+ + ++VN+SA Q H + + L +R+ PG L +EVTES + +P Sbjct: 905 LRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEPE 964 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSS 602 + LR L+N GVR++LDDFG GY L ++K PID +KID+ FV L D++ Sbjct: 965 RTIFTLRELKNIGVRISLDDFGTGYCS---LNYLKRFPIDSIKIDRCFVTDLATSAEDAA 1021 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 + I+ LA SLN +IAEGVE EAQ D+L + G QGFLF+RPLP F Sbjct: 1022 IALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLLAA 1079 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 148/500 (29%), Positives = 243/500 (48%), Gaps = 20/500 (4%) Query: 178 INRLILHPLRNIA----RELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 R + LR +N + L + + D G + + QR Sbjct: 339 FYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGPD--GTFTHYAGIFSDITQR 396 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E + A P++DLPN+ LLME L + R ALM + + + L Sbjct: 397 KLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTL 456 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 A + LL T+ +L L +A++ G +F ++ +++ Q+++ + Sbjct: 457 GHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRVQG 516 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLTAEQLYS-RAISAAFTARHKGKNQIQFFDPQQMEAA 406 + ++ + S+G+A++ D + ++ A +A + A+ +GKN QFF + Sbjct: 517 MVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNAST 576 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 RL ES++ AL +F + QP+V++ G + E LLR + + P I Sbjct: 577 LARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIA 636 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E L+ T+G WVLE++CR W G + ++VNLS+ Q+ ++VA + +L Sbjct: 637 EESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILEHSN 696 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + L LE+TES +D+ + L+ L+ GVR+A+DDFG GY+ L ++K LPID Sbjct: 697 LPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSS---LSYLKQLPID 753 Query: 586 VLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 VLKID+ FV L D+++ +AII + QSLNLQ +AEGVE E R +L G QG Sbjct: 754 VLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQG 813 Query: 643 FLFARPLPIEIFEESYLEEK 662 +LF+RP+P E+ LE + Sbjct: 814 YLFSRPVPAATMEQLLLESQ 833 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 141/496 (28%), Positives = 255/496 (51%), Gaps = 18/496 (3%) Query: 174 ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 + W INR++ + + +V L + ++ + + + + + +R Sbjct: 368 VDWRINRILSEKVCFLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICM----VLRDISER 423 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVL 287 E A ++ LPN+ L + L Q + + A++ + + + L Sbjct: 424 KRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTL 483 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 ++LL + ++L+ V+ ++++ G +F +I + + P ++ + +++L + S Sbjct: 484 GHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSA 543 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 +E+ ++ S+GV ++ D AE+L A +A + A+ +G+N QFF + Sbjct: 544 PFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQFFSEEMNSRV 603 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +RL+ E+ + +AL ++F + QP+V T+G++V E L+R QQP LPD I Sbjct: 604 SERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLA 663 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL++ +G WVL +C AWQE G + +SVN+S Q H N+ + +L Sbjct: 664 EETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETG 723 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 +QP L LE+TES + +P A+++L L+ G+ +A+DDFG GY+ L +K LP D Sbjct: 724 LQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSS---LSLLKRLPAD 780 Query: 586 VLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 +LKIDK FV G+PG D +++A II L ++ L ++AEGVE + Q +L + QG Sbjct: 781 ILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQG 840 Query: 643 FLFARPLPIEIFEESY 658 + F++PLP E + Sbjct: 841 YYFSKPLPAETLQPLL 856 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 133/469 (28%), Positives = 237/469 (50%), Gaps = 17/469 (3%) Query: 203 GHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEML 260 + + L + +E G +V + +R E A +++LPN+ L E L Sbjct: 347 DYYITLSPI---EENGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRTLFHEKL 403 Query: 261 EQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQI 316 + + + + +M I + ++ L + ++LL + +L L ++++ Sbjct: 404 AEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRL 463 Query: 317 SGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQ 375 G +FA+ GV A + Q+++T MSE + ++ I++ SIG++M+ D E Sbjct: 464 GGDEFAIFLTGVTH-REAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEA 522 Query: 376 LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEM 435 L A +A + A+ +GKN QFF + + K+L E ++ AL+ QF + QP++ + Sbjct: 523 LLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHL 582 Query: 436 TSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI 495 +G+++ E L+R PD P I E GL+V +G WV+ +C+ AWQE G Sbjct: 583 QTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGF 642 Query: 496 M-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPL 554 L ++VN+S Q M N++ + +L + P L LE+TES + + + IL L Sbjct: 643 TQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILNRL 701 Query: 555 RNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-PGDSSMIAAIIMLAQS 613 + GV +++DDFG GY+ L ++ PID LKID+ F+ L P + ++I II +A + Sbjct: 702 KALGVSISIDDFGTGYSS---LSYLSQFPIDRLKIDQSFLRNLNPQNQAIIKTIIHMAHN 758 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 + + +IAEGVET D+L + QG+ +++PLP + + + Sbjct: 759 MKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQVNR 807 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 147/499 (29%), Positives = 247/499 (49%), Gaps = 20/499 (4%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 H LR N E+ + + L DE + + + +R Sbjct: 442 FYEAFWHALRANDLWRGEIWNKRKNGEIFPEWVTISAL--RDETSQISHYVAVFLDITER 499 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E N A ++ LPN+ LL + +EQ + Q A++ I + ++ L Sbjct: 500 KKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSL 559 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + LL + +LK+ L +A++ G +F + + + I + ++++ ++E Sbjct: 560 GHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTE 619 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLTAE-QLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 + + QL SIG+ ++ D +L A A + A+ G+N +F+ P A Sbjct: 620 KFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYSPDMNRKA 679 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +RL E+ + A+ Q +++ QP+V + SGK+ E LLR Q P+ + P I Sbjct: 680 LERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIA 739 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+ +G WVL +SC WQ +G + P++VNLSA QL N A ++ +L Sbjct: 740 EETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAG 799 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + L+LE+TES + + + IL LR+ GVR+ALDDFG GY+ L +K+LP+D Sbjct: 800 LDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSS---LSRLKNLPLD 856 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV + P D+S+++A +LA +LNL++ AEGVET+ Q D++ QG Sbjct: 857 SLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQG 916 Query: 643 FLFARPLPIEIFEESYLEE 661 +LF+RP+P + +L + Sbjct: 917 YLFSRPIPASEVVKYFLPD 935 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 741 bits (1914), Expect = 0.0, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 244/500 (48%), Gaps = 21/500 (4%) Query: 177 CINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL- 231 + + H L+ N + EL L + + D G + + Sbjct: 569 AFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTV--ADSQGRPSHYVGVMTDISQ 626 Query: 232 -QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 ++ P+++LPN+ L+ LE + R A++ + + + Sbjct: 627 LKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDS 686 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L ++LL L +L + LA++ G +F V+ +Q P A + + +L+++ Sbjct: 687 LGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSLLQ 746 Query: 347 ERLPI-ERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + + +L SIG++++ D T L A A + A+ +G+N +F+ P + Sbjct: 747 QPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQ 806 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 A++RL E+ + AL + +F + Q Q++M G+L+ E L+R PD I Sbjct: 807 TARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIP 866 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTR 523 E GL+V +G WVL ++C +W+ RG+ L ++VNLS QL P++V + +L Sbjct: 867 LAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRE 926 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 + L LE+TES +D A+ LR L+ GVR+++DDFG GY+ L ++K LP Sbjct: 927 TGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSS---LAYLKRLP 983 Query: 584 IDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 ID LKID+ FV +P DS + A II +A++L L +IAEGVET Q D+L + G Sbjct: 984 IDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAG 1043 Query: 641 QGFLFARPLPIEIFEESYLE 660 QG+LF RPLP E F + Sbjct: 1044 QGYLFGRPLPAEAFAQVMRA 1063 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 130/477 (27%), Positives = 226/477 (47%), Gaps = 21/477 (4%) Query: 204 HQLALPRLHQDDEIGMLVRSYNLNQQLLQRH---------YEEQNENAMRFPVSDLPNKA 254 H + + + G + + + +R N A ++ LPN++ Sbjct: 281 HTYLMVKFPLRGKEGKVFGVCTIGTDISERKLAENALREQQSRLNYMAFHDALTSLPNRS 340 Query: 255 LLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 L + + +AR + ALM++ + + L +ILL + +L + Sbjct: 341 LFYDRIYHGLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDM 400 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 +A++ G +F V+ G+ + I + ++L +S L I + SIGV++F D Sbjct: 401 DTVARLGGDEFVVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPED 460 Query: 371 L-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 ++L A A + A+ GKN QF+ A L E+D+ A+E +Q A++ Sbjct: 461 GADTDELLKNADIAMYKAKEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYY 520 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QPQ+++ +G + E L+R Q P+ P I E GL+V +G WVL E+C+ Sbjct: 521 QPQIDLKTGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKI 580 Query: 490 WQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAV 548 W + G + ++VNLS Q N + +L ++ L LE+TES ++ + Sbjct: 581 WLDTGKNVGKVAVNLSPRQFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETI 640 Query: 549 AILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIA 605 L L G +A+DDFG GY+ L +++ PI LKID+ F+ + D+++ Sbjct: 641 NQLNQLNQMGTFLAIDDFGTGYSS---LAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAK 697 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 II LA ++ L+++AEGVETE+Q +WL G QGFL+A+P+ + E + + Sbjct: 698 TIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPMTAKQLESHFHNGR 754 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 739 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 154/485 (31%), Positives = 243/485 (50%), Gaps = 23/485 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N E+ L + + D GM+ + L QR E+ A P++ LP Sbjct: 412 NRRKNGEIYPEHLTVTAV--KDRNGMVTNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLP 469 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL++ L+Q +A A++ I + + ++LL + ++L S + Sbjct: 470 NRRLLLDRLKQAMASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSV 529 Query: 308 SPRMILAQISGYDFAVIANG-----VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +++ G +F V+ G + A T+G+Q+ + + I + SI Sbjct: 530 RDGDTVSRFGGDEFVVLLEGFDENPLDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSI 589 Query: 363 GVAMFYG-DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G +F + ++L +A A + A+ +G+N ++FFDPQ E KR E D+ A+E Sbjct: 590 GATLFNDKQQSIDELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIE 649 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 NHQF + Q QV+ S AE L+R P+ PD I E L++ +G+WVLE Sbjct: 650 NHQFQLHYQIQVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLE 708 Query: 482 ESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C + WQ LSVN+SA Q + V + L+ +Y I P L LE+TES Sbjct: 709 TACARIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESM 768 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 +D+ +A + L+ GV+ +LDDFG GY+ LQ++K LP+D LKID+ FV + Sbjct: 769 LLDNIEDTIATMSALKELGVKFSLDDFGTGYSS---LQYLKRLPLDQLKIDQSFVRDIAV 825 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D +++ II +A SL+L +IAEGVETE Q+ L+ G QG+LF +P+PIE FE Sbjct: 826 DASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFET 885 Query: 657 SYLEE 661 S + Sbjct: 886 SLRKS 890 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 739 bits (1909), Expect = 0.0, Method: Composition-based stats. Identities = 154/576 (26%), Positives = 281/576 (48%), Gaps = 32/576 (5%) Query: 107 PVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLL 166 + +L ++ L ++E +N ++ AD R + + + + Sbjct: 321 RSLYLQLESRARKLQLYDRAIEESSN----GIVICLADKTRDNPVIYANRAFSIMTGYSH 376 Query: 167 SLILTVAISWCINRLILHP----LRNIARE--------LNAIPAKELVGHQLALPRLHQD 214 I+ ++ + + + P LRN R N L +++AL +H Sbjct: 377 DEIIGLSPRFLLANDLAQPGLERLRNCMRHGGSARAILRNYRKDGSLFWNEVALAAVH-- 434 Query: 215 DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 +E G + ++ + R A ++ LPN+ LL + LE + + Sbjct: 435 NEHGEIAHFISVFNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHT 494 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++++ + + L + L+ + ++ + +A++ G +F +++ + Sbjct: 495 KLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDI 554 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTA 387 ++ A TL Q++L +++ I ++ SIG+AMF D ++L+ A +A + A Sbjct: 555 RDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRA 614 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G+N QF+ + ++RL E + NA+ HQ ++W QP++++ SG + SAE L+ Sbjct: 615 KDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALI 674 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSAL 506 R + P P I E GL++ +G WV+EE+ R LA W+++ + +++N+SA Sbjct: 675 RWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAY 734 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 QL H + +++ L + P +L +EVTE+ + AV L+ LR G+RVALDDF Sbjct: 735 QLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDF 794 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K PID+LKID+ FV + D +++ II LA +LN+ ++AEGV Sbjct: 795 GTGYSS---LTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGV 851 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 ETEAQ ++L G QG+ F +PLP E E Sbjct: 852 ETEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 133/467 (28%), Positives = 241/467 (51%), Gaps = 16/467 (3%) Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVV 264 + +H D G + + + + + A ++ LPN+ALL E L + + Sbjct: 359 SAAPIHNRD--GQVAGAVIVFHDVSESRAMALKMAHLAQHDFLTGLPNRALLTERLSRAI 416 Query: 265 ----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 + ++ + + + L A + LL + E+L + + + G + Sbjct: 417 GQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQGGDE 476 Query: 321 FAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSR 379 F ++ +++ A + +++L +E I +L SIG++++ D A+ + Sbjct: 477 FVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTVMKN 536 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A +A + A+ G+N QFF + A +RL E ++ AL +F ++ QP++++ SG Sbjct: 537 ADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGM 596 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLP 498 ++ +E L+R Q P+ P + E GL+V +G WVL E+CR + AWQE G+ +P Sbjct: 597 MIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVP 656 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 +SVN+SA++ H + + + +L + P L LE+TES + D ++ +L L+ G Sbjct: 657 VSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMG 716 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 +++A+DDFG GY+ L ++K PI+ LKID+ FV + P D+S++ A+I + ++L Sbjct: 717 MQLAIDDFGTGYSS---LSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLK 773 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +++AEGVETE Q +L QGFLF RPLP + F L ++ Sbjct: 774 QRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLLLNDR 820 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 168/697 (24%), Positives = 322/697 (46%), Gaps = 47/697 (6%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLE---SIARSVREPL 57 + R+L +K+ ++ ++L +F L + + Q E S+A + Sbjct: 6 LSFVRNLPLKR-KLMLIIMLCCCASLLAASIFFLTRDAKGVYRVQREDLVSLAEIIGANS 64 Query: 58 SSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELP 117 +SA++ D A+ +A + + V+ R + + RL P Sbjct: 65 ASALVFDDPESAQRTIAPLASKRSILAVYVLTSEGQIMARHVAPEAGNAELPLERLGASP 124 Query: 118 -----------------VQISLGVYS-LERPANPQP--IAYLVLQADSFRMYKFVMSTLS 157 + ++ + L +P + +V+ AD+ +++ + + Sbjct: 125 SPAAVLAAVETIRKTAEKKSAVPGFDCLVQPVYFDYERVGTVVIHADT-ELFRKNLRWTA 183 Query: 158 TLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEI 217 T+ +++L+++I S + ++I PL ++ + + A + ++A P DDEI Sbjct: 184 TVTLLFMLVTVIAAYFFSAKLQQMISRPLLDLLSSMKDVSASKNYAIRVAKP---SDDEI 240 Query: 218 GMLVRSYNLN-------QQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT- 269 G+L +N Q+L++ + A P++ LPN+ L + L Q + + + Sbjct: 241 GLLYDGFNEMLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERN 300 Query: 270 ---TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN 326 +++ I + +D L ++LL+ + +L +V+ +A++ G +F V Sbjct: 301 RQALSVIFIDLDHFKDINDTLGHRTGDLLLIDVANRLSTVVRSCDTVARLGGDEFTVFTQ 360 Query: 327 GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 V +A + ++ + ++ + ++ SIGV +F D T ++L A A + Sbjct: 361 NVMNADNAAIVAAKLNALFAKPFQLGESEIYVTASIGVTLFPNDGKTVDELLMNADIAMY 420 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ GKN + FD + E A +R+T SD+ ALE +F + QP+V++ +G + S E Sbjct: 421 HAKACGKNVYKMFDRKMNEHANERVTLLSDLRLALEREEFVLHYQPKVDLLTGNVTSVEA 480 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLS 504 L+R P PD I E G +V + WVL +C WQE+ + + ++VNLS Sbjct: 481 LVRWMHPRLGMLAPDKFIRLSEESGFIVELTDWVLRTACTQAKKWQEQNLGSVRVAVNLS 540 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 ++ + +L ++P L +E+TES + + A+ R LR G+ +++D Sbjct: 541 PYHFQRQDVKEAIFSVLDATGLEPALLEIEITESALMQNDEYTCALFRELRELGMTISVD 600 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L ++ PI+ LKID+ F+ + D +++ AII +A+SLN+Q++AE Sbjct: 601 DFGTGYSS---LSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTAIIAMAKSLNMQIVAE 657 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 GVET Q + L G QGFL +RP+ E + + Sbjct: 658 GVETVDQLEKLKDQGCHEIQGFLVSRPVAAESVTQFF 694 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 736 bits (1901), Expect = 0.0, Method: Composition-based stats. Identities = 134/489 (27%), Positives = 242/489 (49%), Gaps = 16/489 (3%) Query: 184 HPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNEN 241 PL N + + + L + ++ G + + + + +R E+ Sbjct: 96 QPLINREEPVVDRQSGRIRW--LLTSKFPVFNDTGKTIGLVGIGRDITERKQSEEQIQYL 153 Query: 242 AMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLL 297 A ++ LPN+ + ++L + + A++ I + ++ L + LL+ Sbjct: 154 ATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLI 213 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 T+ + ++ L I+ ++ G +F ++ ++ A + Q++L+ + L + + R Sbjct: 214 TMANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECR 273 Query: 358 PHCSIGVAMFYGDLTAEQ-LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG+ ++ D EQ L A A + A+ +GKN QF+ P + +RL E+++ Sbjct: 274 VTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNL 333 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 ALE H+F + Q + + +GK+ E L+R Q P+ P I E GL+V +G Sbjct: 334 RKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLG 393 Query: 477 HWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVL +C WQ++G+ + ++VNLSA Q N++ D+ L + P L +E+ Sbjct: 394 RWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEI 453 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TE + D A+ IL ++ GVR+A+DDFG+GY+ L H+K PID LK+D F+ Sbjct: 454 TEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSS---LAHIKRFPIDTLKVDSSFIR 510 Query: 596 GLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 +P D ++ AII + ++L+L +IAEGVET+ Q ++L + QG+ F++P+ E Sbjct: 511 DIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPE 570 Query: 653 IFEESYLEE 661 F L Sbjct: 571 EFTRFMLAH 579 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 734 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 138/510 (27%), Positives = 241/510 (47%), Gaps = 20/510 (3%) Query: 167 SLILTVAISWCINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVR 222 +++ + R + L + N + E+ L++ + + D G + Sbjct: 363 AVLASGRQDAAFYREMWATLGKRGQWQGEIWNRRRSGEIYPEWLSITAITEGD--GGVSH 420 Query: 223 SYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIIT 276 + + R A ++ LPN+ LL + L Q + + + A++ + Sbjct: 421 YIGIFSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRNSTQAAVLFLD 480 Query: 277 CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAIT 336 + + L + LL + ++ + +A+ G +F ++ ++ A T Sbjct: 481 LDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIVLPDLEHGQDAGT 540 Query: 337 LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQI 395 + +++L ++E + +L SIG+A++ GD L A +A + A+ G+N Sbjct: 541 IARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMYRAKADGRNGF 600 Query: 396 QFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGS 455 QF+ + L E + AL+ ++ ++ QP+V G + E LLR Q PD Sbjct: 601 QFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEALLRWQHPDLG 660 Query: 456 WDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMV 514 P + E GL+V +G WVL E+CR L AW + G+ +P++VNLS Q H ++V Sbjct: 661 LLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLSGQQFAHQDIV 720 Query: 515 ADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLR 574 A + E L +R+ L LE+TE+ + D +A L LR GV +A+DDFG GY+ Sbjct: 721 ALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAIDDFGTGYSS-- 778 Query: 575 QLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDW 631 L +++ ++ LKID+ FV + D + A+I LA +L L + AEGVET AQ+ + Sbjct: 779 -LAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVETAAQQHF 837 Query: 632 LAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 LA+ G QGFLF +P P E F + ++ Sbjct: 838 LARHGCDQLQGFLFGQPEPAEAFAQRLADD 867 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 127/481 (26%), Positives = 228/481 (47%), Gaps = 17/481 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLP 251 N EL ++ + +E + + + +R E + A ++ LP Sbjct: 222 NRKKNGELYWASASISPITNGNE--QITHFIAFQEDITERKQAEETIKQMAYYDTLTGLP 279 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L E++ +A+ A++ + + + L + LL +LK Sbjct: 280 NRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECC 339 Query: 308 S-PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 R +A+ G +F ++ + + A+ + Q+++ ++ + I+L IG+++ Sbjct: 340 RRDRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISI 399 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D E L A A + A+ +G+++ + E A +RLT E+ + AL+ +F Sbjct: 400 FPNDGRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEF 459 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 +++ QP+V + +G++V E L+R Q P+ LP+ I E GL++ +G WVL +C Sbjct: 460 SLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACA 519 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 WQ + ++VN S Q P + + ++L + P L LE+TE+ + + Sbjct: 520 QNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNV 579 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---S 601 V L L N G+ +++DDFG GY+ L ++K LPI LKID+ FV + + + Sbjct: 580 EKTVQTLNRLSNLGIHISIDDFGTGYSS---LSYIKKLPIQTLKIDRSFVHDINTNADDA 636 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ++ A+I +AQSL L +IAEGVET Q L QG+LF++PLP+ Sbjct: 637 AIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLLSNI 696 Query: 662 K 662 K Sbjct: 697 K 697 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 134/498 (26%), Positives = 237/498 (47%), Gaps = 20/498 (4%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 R + L + + N ++ L L + ++ + +++ + R Sbjct: 340 FYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSED--KITNYVGISRDITLR 397 Query: 234 HYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E+ A ++ LPN+A + L +AR A++ + + + L Sbjct: 398 KEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLDLDRFKVINDTL 457 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + LL + ++L LA+ G +F ++ ++ A +++L +++E Sbjct: 458 GHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDAAVAARRILDVLAE 517 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 ++ ++ SIG++++ D + L A A + A+ GKN QF++ Sbjct: 518 PFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKNDYQFYESTMSTGG 577 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +RL E D+ AL+ ++F + QP+V + +G +V AE L+R PD P I Sbjct: 578 LERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLPDRGLLWPLDFIPLA 637 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYR 525 E G ++ +G WVL +C WQ+ G+ +SVNLS Q N+ + + +L Sbjct: 638 EESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKDNLTSTVDRILKETG 697 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + PG L LE+TES +++ AVA L+ L GV VA+DDFG GY+ L ++K PI Sbjct: 698 LSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYSS---LGYLKRFPIG 754 Query: 586 VLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV +P D+++ +II L ++LNL+++AEGVET+ Q L AQG Sbjct: 755 ALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTVLRNYQCDEAQG 814 Query: 643 FLFARPLPIEIFEESYLE 660 +LF++P+ + E + Sbjct: 815 YLFSQPVDADRMTEFLVN 832 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 136/490 (27%), Positives = 230/490 (46%), Gaps = 14/490 (2%) Query: 182 ILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QN 239 I+ + + E + + + +D E + + + R E Sbjct: 322 IVGEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDITARKRAEADIQ 381 Query: 240 ENAMRFPVSDLPNKALLMEMLE----QVVARKQTTALMIITCETLRDTAGVLKEAQREIL 295 A ++ L N+ L L+ + Q A+M + + + L + L Sbjct: 382 HLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDEL 441 Query: 296 LLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQ 355 L + +L+ + +A++ G +F V+ G+ + ++L +S ++ + Sbjct: 442 LKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTE 501 Query: 356 LRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 L SIG+++F D L A +A + A+ G+ + QF+ + AA RL E Sbjct: 502 LHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLER 561 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 + A+ +F +W QPQ + G L E L+R + P P I E G++V Sbjct: 562 KLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVE 621 Query: 475 VGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 +G WVL E+CR W + G+ L +SVNLS QL +V + L ++PG L L Sbjct: 622 IGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLEL 681 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TES +D+P AVA+L+ L+N GVR+A+DDFG G++ L ++K P+D LKID+ F Sbjct: 682 EITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSS---LSYLKLFPLDHLKIDRSF 738 Query: 594 VEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 + + D++ ++AA + LA +L L +IAEGVE+ Q L + G QGF F+RP+ Sbjct: 739 ISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVT 798 Query: 651 IEIFEESYLE 660 ++ E Sbjct: 799 ADVVENLLRS 808 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 158/664 (23%), Positives = 290/664 (43%), Gaps = 31/664 (4%) Query: 13 AMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAI 72 A+ LV + ++ L + +E + V E AE Sbjct: 98 AVTGVASLVTAIMLWRLMPQALRIPSTRQLEETVERLEHEVEE----------RELAERS 147 Query: 73 L----ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLE 128 L +++ A++ N+ L E + V + + Sbjct: 148 LAAFNDTLETLVQQRTAELEEINRLLKLEIDLRREAE-QTLYAEKQRAVVTLQSIGDGVI 206 Query: 129 RPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILH-PLR 187 + YL A+ + + L+ ++ +++ + ++ ++ H + Sbjct: 207 TTDKQSRVNYLNPVAERMTGWSNAEAQGKPLLEVFRIVNESSRKLVPNPVDVVLQHGEIY 266 Query: 188 NIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRF 245 +A I + + + D+ G ++ + + + + A Sbjct: 267 GLANHTALIG-RHGNEYAIEDSAAPIRDQDGNVLGVVLVFHDVSEARNMANKMTYLAEHD 325 Query: 246 PVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVE 301 ++ LPN+ LL + L Q + + ALM + + ++ L + LL + Sbjct: 326 YLTGLPNRLLLNDRLNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVAR 385 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 +L+S L +++ G +F ++ + + + +++L + I ++ S Sbjct: 386 RLESCLRASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSAS 445 Query: 362 IGVAMFYGDLTAEQLY-SRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+A+F D +L A +A + A+ G+N QFF E + ES + A+ Sbjct: 446 IGIAVFPDDGENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAV 505 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E ++F ++ QP++++ +G++V AE L+R Q P PD I E GL+ +G WV+ Sbjct: 506 ERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVM 565 Query: 481 EESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 E+CR WQ G+ +P++VNLS +QL N + ++ E+L ++P L LEVTES Sbjct: 566 REACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESV 625 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 I + L LR+ GV++ALDDFG GY+ L ++K LPI+ +KIDK F+ + Sbjct: 626 AIHAETEVINWLHKLRSMGVKLALDDFGTGYSS---LSYLKRLPINNVKIDKSFIRDIET 682 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 P D+++I AII ++ L L +IAEGVE Q ++L K G QGF+ +RP+P + F Sbjct: 683 DPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEFAL 742 Query: 657 SYLE 660 Sbjct: 743 LLQN 746 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 239/500 (47%), Gaps = 22/500 (4%) Query: 177 CINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ 232 + + + ++ N + L + R+ D G + Q Sbjct: 906 AFYQSMWESIESLGHWQGEIWNRRKDGSVYPEWLLISRV---DGDGAPTHYIGTFIDITQ 962 Query: 233 RHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 E A ++ LPN++LL E + +AR ALM + + ++ Sbjct: 963 HKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDS 1022 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL+ + E+L+ + ++++ G +F V+ + A + ++L +M+ Sbjct: 1023 LGHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLPS-TDADGAAHVAAKLLEVMA 1081 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 IE+ +L S G+AM+ D + E L A +A + A+ G+N FF + E Sbjct: 1082 PAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQER 1141 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 + + L E+D+ ALEN + + QPQ + +LV AE LLR Q P P I Sbjct: 1142 SARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPI 1201 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRY 524 E CGL++ +G WVL + L WQ+ G+ + ++VNLSA+Q ++ + +L Sbjct: 1202 AEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAE 1261 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + L LE+TES +D+P AA+A + LR GVR+++DDFG GY+ + ++K + Sbjct: 1262 GLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSM---SYLKRFRV 1318 Query: 585 DVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 LKID+ FV L P D +++ A I LA+ L LQ IAEGVE+EAQ +L G AQ Sbjct: 1319 HKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQ 1378 Query: 642 GFLFARPLPIEIFEESYLEE 661 G+LF+RPL F Sbjct: 1379 GYLFSRPLAPAQFAAFVRAH 1398 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 136/572 (23%), Positives = 260/572 (45%), Gaps = 30/572 (5%) Query: 115 ELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAI 174 Q + L A +++ + + + + + + Sbjct: 337 RHGRQAAEAALRLRERAIECSANAVIISSAQVPEFAIEYVNPAFERITGYTAAEAIGRSS 396 Query: 175 SWCINRLILHPLRNIARE------------LNAIPAKELVGHQLALPRLHQDDEIGMLVR 222 S+ + R N L + L + + D+ G Sbjct: 397 SFLLRNDHEQAGLYEIRAALAEKREGKAVLRNYRKNGSLFWNDLYIAPV--KDDEGKTTH 454 Query: 223 SYNLNQQLL--QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIIT 276 + +++ + A ++ LPN+ALL + LE +A ++++ Sbjct: 455 FVAAMSDITPMKQYETTLHRLASHDVLTGLPNRALLQDRLENAIAYSARNGHAVWVVLVD 514 Query: 277 CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE--PWHA 334 + + + ++LL + ++L++ + +A++ G +F ++ + ++ Sbjct: 515 LDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARLGGDEFVLVLPECGDGPSGYS 574 Query: 335 ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKN 393 + Q+++ + + L I+ + CS+G+A++ D L + A A + ++ G+N Sbjct: 575 SDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTLLAHADVAMYRSKELGRN 634 Query: 394 QIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPD 453 QF+ P + A +RL E ++ +A+E ++ + QPQV++ +G +V E L+R P Sbjct: 635 NFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPI 694 Query: 454 GSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPN 512 P I E GL++ +G WVL+ +CR AWQ+ G L ++VNLSA Q + Sbjct: 695 LGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQAS 754 Query: 513 MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAG 572 ++ + + L ++ L +E+TES + D + LR L++ GV++++DDFG G++ Sbjct: 755 LLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSS 814 Query: 573 LRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQR 629 L ++K PID LKID+ FV + D+S++++II LA +L L +IAEGVET +Q Sbjct: 815 ---LAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQM 871 Query: 630 DWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 D L G QG+ F +PLP + E L E Sbjct: 872 DILRAQGCNEIQGYYFCKPLPSDQIETLLLNE 903 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 131/480 (27%), Positives = 238/480 (49%), Gaps = 17/480 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDL 250 +N + L D G + ++ + + ++ + A ++ L Sbjct: 824 INRRKDGTEYVELARISPLRHTD--GRVTNYLSIKEDITEQKQVEARIRQLAHFDLLTGL 881 Query: 251 PNKALLMEM----LEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ LL + ++ A++ + + ++ L + LL+ L +++K + Sbjct: 882 PNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLL 941 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 L L++ G +F ++ + A + +++L +++ IE+ +L SIG+AM Sbjct: 942 LRDEDTLSRFGGDEFILVLPD-TDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAM 1000 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D ++LY A A + A+ G+N +FF + + +RL E+ + AL +QF Sbjct: 1001 YPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQF 1060 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QPQ+ M GK+V AE LLR P+ P I E GL++++G WVL + + Sbjct: 1061 ELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQ 1120 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 + WQ+ G + +++NLSA+Q + ++++L + P + LE+TES +D+P Sbjct: 1121 QVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNP 1180 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---S 601 A+ ++ L G+R+++DDFG GY+ L +++ ++ LKID+ FV L D Sbjct: 1181 LVAIGVMNDLHGCGIRMSIDDFGTGYSS---LSYLRKFKVNKLKIDQSFVRDLADDIESR 1237 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +++ AII LA S+ Q IAEGVET Q +L G QG+ F+RPL + +FE L Sbjct: 1238 AIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAFVLGH 1297 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 143/568 (25%), Positives = 249/568 (43%), Gaps = 29/568 (5%) Query: 115 ELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAI 174 E ++ S Y + + P P+ + + + ++ Sbjct: 308 EEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFLPVE 367 Query: 175 SWCINRLILHPL---RNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL 231 + N+LI + + ++ K+ + + D L S Q + Sbjct: 368 NVPENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQGSIITLQDIT 427 Query: 232 QRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARK------------QTTALMIITC 277 +R EE A ++ L N+ LE + R AL + Sbjct: 428 ERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLDV 487 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + L + LL + +LK+ L + ++ G +F +I N + + + Sbjct: 488 DRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAKV 547 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQ-I 395 Q++ ++ I+ +L SIG++++ D E L A A + A+ + NQ Sbjct: 548 AQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEE--NQGY 605 Query: 396 QFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGS 455 +FF + +R+ E+++ NAL++ Q I+ QP V+ ++ ++V E LLR P+ Sbjct: 606 RFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVD-STNQIVGMEALLRWHHPELG 664 Query: 456 WDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMV 514 P I E GL+V +G WVL +C+ W E G ++VNLS Q P++V Sbjct: 665 LISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLV 724 Query: 515 ADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLR 574 + ++L + P L LEVTES ++ P A+A ++ LR G+ ++DDFG GY+ Sbjct: 725 ETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSS-- 782 Query: 575 QLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDW 631 L ++K PID LKID+ FV D +I II +A++L + +AEGVE + Q+D+ Sbjct: 783 -LSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDF 841 Query: 632 LAKAGVGIAQGFLFARPLPIEIFEESYL 659 L G + QG+ F RP+P E FE+ Sbjct: 842 LIHHGCHMMQGYYFGRPMPAEKFEDMLQ 869 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 130/475 (27%), Positives = 242/475 (50%), Gaps = 15/475 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDL 250 +N L + + D G++ ++ + + R E+ A ++ L Sbjct: 442 MNRKKDGSLFWQHAIISPI--RDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGL 499 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ L M+ L+Q +A+ Q ALM++ + + L A ++LL +L Sbjct: 500 PNRILAMDRLKQAIAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDC 559 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 L +A++ G +F ++ + + A + +++L ++ + + SIG+A+ Sbjct: 560 LREGDTVARLGGDEFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAI 619 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D L A +A + ++ +GK ++F P+ A + + ES + +A+E ++ Sbjct: 620 FPDDERDPILLMRNADAAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLRHAIERNEM 679 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QP V+ +G+LV AE LLR P P+ I E GL++++G WVL +CR Sbjct: 680 KVHYQPLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACR 739 Query: 486 LLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 A+WQ + ++VN+S Q +V + L + P L LE+TES ++ Sbjct: 740 DAASWQRPDHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQ 799 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSS 602 ++I++ L + GV A+DDFG G++ + +++ P D LKID+ F++ L D+ Sbjct: 800 ETLSIIQELESLGVGFAIDDFGTGFSSI---SYLRRFPFDTLKIDRSFIKDLGDNEGDAD 856 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 ++ +II +A S++L+++ EGVET QR++L +G IAQG+L++RP+P + F+E Sbjct: 857 LVKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQEL 911 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 145/479 (30%), Positives = 235/479 (49%), Gaps = 16/479 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 + E L++ + DE G + + + E A +++L Sbjct: 425 DRKKNGEAYPKWLSISLV--RDEDGQIRNHIGSFIDISELKATQERIRHLAHHDTLTNLA 482 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L E L Q +A + ALM+I + + L + LL+ + ++L + Sbjct: 483 NRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAV 542 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 I+A++ G +F + G+ P A L + +S I+ +LR SIG+ ++ Sbjct: 543 RESDIVARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVY 602 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 GD L A A + A+ G+ QFF A +R+ ESD+ A+ +F Sbjct: 603 PGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAITRREFL 662 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QPQ+++ SG +V E L+R Q P P I E G++ +G WVLEE+CR Sbjct: 663 LHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQ 722 Query: 487 LAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 L WQ RGI L +S+NLSA Q + + A + ELL + L LEVTES + P Sbjct: 723 LKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPD 782 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSS 602 ++++++ L ++G+ +++DDFG GY+ L ++K LPI LKID+ FV+ + P D+ Sbjct: 783 ESISVMKTLSSSGLTLSIDDFGTGYSS---LAYLKLLPIHTLKIDRSFVKDIESDPNDAD 839 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + ++LA L L+++AEGVETEAQ +L G QG+L ++PLP + E Sbjct: 840 ICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIRNN 898 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 128/458 (27%), Positives = 225/458 (49%), Gaps = 15/458 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D G + + +R E A ++ LPN+ L + L + + Sbjct: 1052 DIKGETSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANN 1111 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ + + + + ++LL ++L++ + +A++ G +F +I GV Sbjct: 1112 IVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGV 1171 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTA 387 + A + ++VL +E L SIG++++ D A+ L A +A + A Sbjct: 1172 AKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHA 1231 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G+N QF+ + E A + + E+ + A+ ++ ++ QP+ + G L E LL Sbjct: 1232 KSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALL 1291 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSAL 506 R + P I E G++ +GHWV+ +C+ LA W G + ++VNLSA Sbjct: 1292 RWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSAR 1351 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 QL ++++ + L + +L LE+TES + +P +V+IL L+ G+ +A+DDF Sbjct: 1352 QLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDF 1410 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K PID LKID+ FV + P D+++ +AII LA SL L ++AEGV Sbjct: 1411 GTGYSS---LSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGV 1467 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ET+AQ ++L G QGFL ++PL + + Sbjct: 1468 ETQAQLNFLGLQGCDEVQGFLLSKPLSAKDCLTLLGNQ 1505 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 244/500 (48%), Gaps = 21/500 (4%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ- 232 R + ++ N E+ LA+ + ++ G ++ L Q Sbjct: 848 FYRKMWANIKEAGSWQGELWNRRKNGEIYPTWLAVSAV--RNDQGKATHYVGISSDLSQL 905 Query: 233 -RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 + E+ A P++DLPN+ LL L +A+ + ++ + + ++ L Sbjct: 906 RQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSL 965 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + LL+TL E+L + +LA++ G +F ++ + EP + + + +L +++ Sbjct: 966 GYQVGDELLVTLTERLTMHMRSEDLLARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQ 1025 Query: 348 RLPIER-IQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + ++ SIG+++F D AEQL A +A A+ G+N F+ A Sbjct: 1026 PFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTEDLSRA 1085 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 + + L E+ + +A+ +Q ++ QPQV++ +G ++ AE L+R Q P+ P I Sbjct: 1086 SNEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIPL 1145 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRY 524 E GL+ +G WVL+E+C W + G+ L L+VNLS Q + N+ + ++L Sbjct: 1146 AEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAET 1205 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 L LE+TES + + +L LR +R+A+DDFG GY+ L ++K P+ Sbjct: 1206 GFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSS---LSYLKRFPL 1262 Query: 585 DVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 D+LKIDK FV+ +P D + A II + L +++AEGVET Q ++L G + Q Sbjct: 1263 DILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQ 1322 Query: 642 GFLFARPLPIEIFEESYLEE 661 G+L + P+P E FE+ E Sbjct: 1323 GYLTSPPIPAEEFEKLLKEN 1342 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 728 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 137/486 (28%), Positives = 246/486 (50%), Gaps = 16/486 (3%) Query: 188 NIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ-RHYEEQNE-NAMRF 245 + +L+ + + + + D + +++ + + + + + +E Sbjct: 372 KLETDLSLVTPGGRRLVEGTVAPIRNDSD--VIIGTVVALKDITEIKKKDEILYNMEYYD 429 Query: 246 PVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVE 301 P++ LPN++L + L+ +A+ + AL+I+ + + L + ++LL + E Sbjct: 430 PLTGLPNRSLFSDRLKMALAQSKRNNEMCALIILDLDNFKAINDTLGHSVGDMLLKQVAE 489 Query: 302 KLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 K+K L +A+I G +F +I +++ A ++L + +E + S Sbjct: 490 KIKGYLREVDTVARIGGDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITAS 549 Query: 362 IGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 +G+ ++ + ++ A +A + A+ G+N Q + + +RL E+ + A+ Sbjct: 550 MGIGIYPNGGEDPQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAI 609 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 E +F ++ QPQ+++ +GK+V E LLR PD P I E GL+V +G WVL Sbjct: 610 EKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVL 669 Query: 481 EESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 E +CR W E G+ +SVNLSA Q N+V + + + + P L LE+TES Sbjct: 670 ETACRQNKKWIECGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITEST 729 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 + D + +L LR G+RV+LDDFG GY+ L +++ LPID LKIDK FV+ + Sbjct: 730 AMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYSS---LNYLRQLPIDTLKIDKSFVQDIRA 786 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 + ++ +I LA L+L ++AEGVET+ Q +L K AQG+LF++PLP E E+ Sbjct: 787 NSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEK 846 Query: 657 SYLEEK 662 ++K Sbjct: 847 MLRDKK 852 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 728 bits (1880), Expect = 0.0, Method: Composition-based stats. Identities = 135/494 (27%), Positives = 234/494 (47%), Gaps = 16/494 (3%) Query: 177 CINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYE 236 I L+ + + L + E +++ +H D G L + + QR Sbjct: 555 LIGNLVQQHGKWMGELLAQKRSGEYYPAWVSISTVH--DNHGSLQNYVVVLTDISQRKQA 612 Query: 237 E--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEA 290 E A ++ LPN+ LL E +E V R Q ++ I + + L Sbjct: 613 EERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQ 672 Query: 291 QREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLP 350 ++LL + +L L +A+ G +F V+ E + + + ++++ +++ Sbjct: 673 AGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFI 732 Query: 351 IERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKR 409 + + +L SIG++++ D L A A + A+ GKN F+ + R Sbjct: 733 LMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKNTFHFYSADGNANSVSR 792 Query: 410 LTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECC 469 LT E+ + ALE ++F++ Q ++++ ++ AE L+R + P I E Sbjct: 793 LTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEET 852 Query: 470 GLMVTVGHWVLEESCRLLAAWQE-RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQP 528 G+++ +G WVL+++CR WQE G + + VN+SA Q ++ + L + P Sbjct: 853 GMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLTP 912 Query: 529 GTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLK 588 L LE+TES + + A +L+ RN G V +DDFG GY+ L ++K PID LK Sbjct: 913 NCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSS---LGYLKHFPIDSLK 969 Query: 589 IDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLF 645 ID+ FV +P D ++ AII +A SL + ++AEGVET+AQ ++L G QG++F Sbjct: 970 IDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIF 1029 Query: 646 ARPLPIEIFEESYL 659 +RPL +E F Sbjct: 1030 SRPLVVEDFVGLLR 1043 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 132/479 (27%), Positives = 242/479 (50%), Gaps = 17/479 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLP 251 N E+ L++ R D G + + + + E+ A P++ L Sbjct: 991 NRRKNGEIFPEWLSISRGL--DTSGNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLV 1048 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LLM+ L ++ AL+ I + ++ L + LL+ + +++ +L Sbjct: 1049 NRELLMDRLNHSISTADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKIL 1108 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A+ G +F V+ E A+ + +++L +S++L ++ +L SIG+A++ Sbjct: 1109 RDEDTIARQGGDEFIVVLPDTGE-NGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVY 1167 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D A+ L A +A + A++ G+N +FF + + + + ES + AL + QF Sbjct: 1168 PQDGKDADSLLKNADTAMYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFE 1227 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QPQ SG ++ E L+R P+ P I E G ++ +G WVL + R Sbjct: 1228 LYYQPQTCAKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQ 1287 Query: 487 LAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 + W E G + ++VNLSA+Q + ++ ++++L + P L LE+TES + +P Sbjct: 1288 IKIWSEHGKPCIKVAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPE 1347 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSS 602 A + ++ L G+++++DDFG GY+ L ++K + LKID+ F+ L D S Sbjct: 1348 AVIEMMDKLVGHGIKMSIDDFGTGYSS---LSYLKRFKVSKLKIDQSFIRDLAVDSDDRS 1404 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +I AII L+++L L+ IAEGVET+AQ D+L + QGF +++ L E F+ Y ++ Sbjct: 1405 IIEAIISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFYEKQ 1463 >UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q0HLF7_SHESM Length = 684 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 189/670 (28%), Positives = 339/670 (50%), Gaps = 16/670 (2%) Query: 5 RSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKG 64 +SLT KQ +V L F V + +V + T + + SV +P ++A+ Sbjct: 6 KSLTWKQTNLVVFTALFFAIAIFVVEIALVVIATKQQLTTTQQELLDSVEQPAANAVWAL 65 Query: 65 DIPEAEAILASIKPAGVVSRADVVLPNQFQALR---KSFIPERPVPVMVTRLFELPVQIS 121 D A L V A + L + + + + +LF+ +IS Sbjct: 66 DDNLARQTLEGAIKVEHVGSAVIELDDGSMFVSVSNNKKNDSQTFISLSNKLFDDLKEIS 125 Query: 122 LGVYS---LERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCI 178 +Y E Q I L + D+ + + S L L +L+LT+ +S Sbjct: 126 RPLYRPFYFEGTQKQQLIGTLTIFYDTQELTNTLFSQLRFSFFATLARALLLTLVLSVVF 185 Query: 179 NRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQ 238 +R + P+ I+ ++ I + L + H+DDE+G++ +N + + Sbjct: 186 HRFLTQPIARISEAIDKISPDSPDENLLPMSNAHKDDELGLVTSKFNQILIQFSQTQSKL 245 Query: 239 NENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREI 294 + A R P++ LPN+ LL+E + + R + + ALM I + ++ L A + Sbjct: 246 RKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFALMFIDLDRFKNINDSLGHALGDQ 305 Query: 295 LLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERI 354 L + L+ V+ + ++++ G +F ++A+ V P A ++L ++ + + Sbjct: 306 FLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPDQAADFVDKLLVQLNVPIQLNEH 365 Query: 355 QLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEE 413 + P SIG++++ D AE L A A ++A+ G NQ FF Q E A RL E Sbjct: 366 AIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTERAAVRLRTE 425 Query: 414 SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMV 473 + + +AL+N++F ++ QP++++ +GK+ E L+R Q+ P I E G+++ Sbjct: 426 ASLHDALKNNEFLLYFQPKLDLQTGKITGCEALIRWQKDGR-LISPISFIPVAEETGIII 484 Query: 474 TVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 +G WV+E+SCR+L WQ++ +P+++N+++ Q ++V+D+ ++ RY+IQP L Sbjct: 485 PIGRWVIEQSCRVLREWQKKYNFAIPIAINVASQQFADASLVSDIKQMALRYQIQPELLE 544 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 +E+TE+ ++D A+ L L++AG +A+DDFG GY+ L +++ LPI +KID+ Sbjct: 545 IEITETSLMNDIELAINKLEQLKSAGFGIAVDDFGTGYSS---LSYLRHLPITTMKIDRC 601 Query: 593 FVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 FV LP DS++ + I+ML + LNL ++AEG+E E Q DWL + I QGF F++PLP Sbjct: 602 FVSDLPEDSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKRNQCQIGQGFYFSQPLPQA 661 Query: 653 IFEESYLEEK 662 FE Y+ + Sbjct: 662 EFEALYIANQ 671 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 161/705 (22%), Positives = 301/705 (42%), Gaps = 63/705 (8%) Query: 10 KQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPE- 68 +Q+ + + VF+ + CT+ L + + Q E +++ E ++ I D Sbjct: 346 RQVTIALLIAGVFLCLSCTLTLMIMRYKKTLQALRQSEGTLKAMLESIADPIHMVDRDLN 405 Query: 69 ---AEAILASIKPAGVV---SRADVV---LPNQFQALRKSFIPERPVPVMVTRLFEL--- 116 A I + +V A + P + F++ Sbjct: 406 ILWANDIAKQLFGKNLVGQKCYAALHRSPTPCDPMCHAIKAFSDGHAHSSENLFFDINDE 465 Query: 117 PVQISLGVYSLERPANPQPIAYLVLQAD------SFRMYKFVMSTLSTLVTIYLLLSLIL 170 + + QP A L + D + + + ++ +T L+ L Sbjct: 466 ERCFLVTANVASTDSQGQPSAVLTISRDVTEIKKTQQQFHQAKWSIDASLTPMLMADLQG 525 Query: 171 TVAIS-------WCI--------------------NRLILHPL--RNIARELNAIPAKEL 201 + + W R+I+ L R + R K Sbjct: 526 RLTYANQAALDLWGYAGEEEVLGKNIVEFQEDPQRTRIIMEILKARGVWRGEGRGKQKNG 585 Query: 202 VGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKALLMEM 259 G + L D+ G + + + E A ++ LPN+ LL + Sbjct: 586 NGFDVELQAQVVKDQNGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTLLKDH 645 Query: 260 LEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQ 315 +E + + + A++++ + + L A ++L+ ++ E+L++ LA+ Sbjct: 646 MELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLAR 705 Query: 316 ISGYDFAVIANGVQEPWHAITLGQQVLTIMSE-RLPIERIQLRPHCSIGVAMFYGDL-TA 373 G +F ++ + + + + ++ + +++E + SIG+A++ D Sbjct: 706 WGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDP 765 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 E L RA +A + A+ G+N FF Q E A++R E ++ +AL+ + + QPQ+ Sbjct: 766 ETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQI 825 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE- 492 ++ ++ E LLR Q P+ P I E GL+ +G WVL+++CR A WQ+ Sbjct: 826 DLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKT 885 Query: 493 RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILR 552 L ++VNLSA Q P++ ++ ++L + P L LE+TES +++ AA+ L Sbjct: 886 EASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALT 945 Query: 553 PLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIM 609 L+ GV+ ++DDFG GY+ L ++K LPID +KI + FV + GD ++I A I Sbjct: 946 ELKKLGVQFSIDDFGTGYSS---LSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIA 1002 Query: 610 LAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 +A+SL +++IAEGVE Q +L G QG+ FA+P+P + Sbjct: 1003 MAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEV 1047 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 147/503 (29%), Positives = 241/503 (47%), Gaps = 21/503 (4%) Query: 175 SWCINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQL 230 R I L R + L++ + DE G + + + Sbjct: 384 DAAFYRRIWRQLLASGRWEGELWHRKRDGTPFPLWLSISCV--RDEQGRPRQYVFVFNDI 441 Query: 231 LQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTA 284 Q E+ A P++ LPN+ L + LE + R + A+M I + + Sbjct: 442 SQLKDSQEQLERLAHYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTIN 501 Query: 285 GVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTI 344 L + LL+ + ++L L LA++ G +F V+ ++ +L + Sbjct: 502 DSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEFLVVIEEAP-VQQVASIAHALLKV 560 Query: 345 MSERLPI-ERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQ 402 + + + SIG++++ GD +A +L A +A + A+ +G N +F+ Sbjct: 561 VDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSNAYRFYTESL 620 Query: 403 MEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGL 462 AA +RL+ E+ + AL +F + QP VE+ SG+++ AEVL+R Q P + P Sbjct: 621 TRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRF 680 Query: 463 IDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLT 522 I E GL+V +G WVL E+CR AW + G+ L L+VNLS Q + ++V + + L Sbjct: 681 IPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQ 740 Query: 523 RYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSL 582 + P L LE+TE ++ AV L L+ GV +A+DDFG GY+ L ++K Sbjct: 741 GSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSS---LAYLKRF 797 Query: 583 PIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGI 639 P+D LKID+ FV LP D+ ++ II + ++L L+ +AEGVET Q +L + G Sbjct: 798 PLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDS 857 Query: 640 AQGFLFARPLPIEIFEESYLEEK 662 QG+LF+ PLP E FE + + Sbjct: 858 GQGYLFSPPLPAEAFERWLRDGR 880 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 150/481 (31%), Positives = 249/481 (51%), Gaps = 16/481 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDL 250 ++ L +A+ + D G+L + +R + A P++ L Sbjct: 735 IDRRKDGTLYPKWMAVSVV--RDADGVLTHYVASFTDITERKLAEAQIKHLAYHDPLTGL 792 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 N+ L L+Q +A + A++ + + + L A + LL+ + +L+ Sbjct: 793 SNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDN 852 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + I+A++ G +F V+ V + A + ++L + R I L SIG+++ Sbjct: 853 VRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISL 912 Query: 367 FYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D A+ L A +A + A+ +G++ +QFF P+ ++ KRL + D+ A+E QF Sbjct: 913 YPHDGDDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQF 972 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QPQ+ TSG++V E L+R Q P P I E GL++ +G WVL E+CR Sbjct: 973 ELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACR 1032 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 L W++ GI L ++VNLSA QL P ++ + L + ++ L LE+TES + D Sbjct: 1033 QLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDT 1092 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 A++A L+ LR+ G+ +++DDFG GY+ L ++K LPID LK+D+ FV + P D Sbjct: 1093 TASIAQLQALRDLGIHLSIDDFGTGYSS---LSYLKLLPIDTLKLDQSFVCEIEFNPSDV 1149 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ++ AA I LA SL L+++AEG+ETE QR LA QG+LF+ PLP E E+ Sbjct: 1150 AICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERALAYIREQ 1209 Query: 662 K 662 + Sbjct: 1210 Q 1210 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 130/480 (27%), Positives = 233/480 (48%), Gaps = 17/480 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDL 250 N + + + Q D G ++ + + + ++ E + ++ L Sbjct: 674 FNRRKDGTEYIESVLISPVSQVD--GRVMNYLAIKEDITEKRLTEERIEKLEHFDHLTGL 731 Query: 251 PNKALLMEMLEQVVARKQTTA----LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ L E + ++ Q + +M + + +D L + + LL+ + ++LK Sbjct: 732 PNRTQLNERFKYALSLAQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKET 791 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 L +++ G +F +I G + A + +++ +S+ E+ +L CSIG+A+ Sbjct: 792 LRDEDTVSRQGGDEFILILPG-TDENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAI 850 Query: 367 FYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D E L A +A + +H G+N FF + + + L + + +AL Q Sbjct: 851 YPHDGENFETLSKNADTAMYRVKHDGRNGFCFFTSEMQAHSARTLQLGNALRHALTRGQL 910 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QPQ+ G +V AE LLR Q P+ P I E G ++ +G WVL + + Sbjct: 911 HLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIK 970 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 L W + G+ + ++VNLSA Q N++ + +L ++ L LE+TE+ +DDP Sbjct: 971 QLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDP 1030 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 A+ ++ L G+++++DDFG GY+ L ++K + LKID+ FV + P D Sbjct: 1031 QLAIGVMDKLHTGGIKMSIDDFGTGYSS---LSYLKRFKVYKLKIDQSFVHDITDDPDDK 1087 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +++AAII +A SL +Q IAEGVET Q +L G QG+ F++PLP E F ++ Sbjct: 1088 AIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAEQFVSYLQKQ 1147 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 126/475 (26%), Positives = 233/475 (49%), Gaps = 17/475 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLP 251 + + + +++ + DE G +V ++ + ++ E + A ++ LP Sbjct: 447 DKHKSGRIYPKWMSITAV--RDEHGKVVNYISIARDTTEQTEAEKNIHFLAYYDVLTGLP 504 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL + L Q++A +L+ + + + + + + LL ++ +++ + Sbjct: 505 NRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCV 564 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F V+ A + Q++L ++ ++ + SIG++++ Sbjct: 565 REGDTVARLGGDEFIVLLRE-AGESAASVVAQKLLIALATPYDLDGQVISTQASIGISIY 623 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 A+ L A A + A+ +G+N QFF P+ + E D+ ALE + Sbjct: 624 PDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALERGELF 683 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QPQ ++ SG L E L+R P P I E G +V +G WVL +C Sbjct: 684 LQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQ 743 Query: 487 LAAWQERG-IMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 +A W++ G L ++VNLS QL P++ + +L + L LE+TE + D Sbjct: 744 MAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQ 803 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSS 602 AA L +++ GV++++DDFG G++ L ++K +P++ LKID+ F+ + GD++ Sbjct: 804 AAFRFLSEMQDLGVQLSIDDFGTGFSS---LNYLKQMPVNKLKIDQSFIRDIETDEGDAA 860 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 +I +II L LNL++IAEGVET+ Q D+L G QG+ ++RPL E F Sbjct: 861 IIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDFMRF 915 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 136/481 (28%), Positives = 235/481 (48%), Gaps = 18/481 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N + ++ L DE G ++ + + + QR + A ++ L Sbjct: 764 NKRKDGSIFWESASISPL--FDESGKIINFIGVKEDITQRKLNEKRLEYMATHDGLTGLA 821 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL + LE + + Q A++++ + + L + +L + ++LK + Sbjct: 822 NRTLLYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYV 881 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F V+ V++ A + +L ++E + +L S G+ + Sbjct: 882 RSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLS 941 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D L A A + A+ +G F+ + E K L E+ + ALE ++F Sbjct: 942 ETDNVDGTILLRNADIAMYKAKAEGCGLY-FYSHEMNEHLIKTLEMENSLRQALEKNEFQ 1000 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QP+VE +G+++ E LLR + P P I E GL+V +GHWVL E+CR Sbjct: 1001 LYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQ 1060 Query: 487 LAAWQERGI-MLPLSVNLSALQLMH-PNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 W+ G+ L ++VN+SA Q N++ + L R ++ P L LE+TES + D Sbjct: 1061 SKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDA 1120 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---S 601 A +R ++ GV ++LDDFG GY+ L +++S P+D LKID+ F+ + D + Sbjct: 1121 VNAERTMRKIKQLGVSLSLDDFGTGYSS---LNYLRSFPVDSLKIDRSFILDIASDASSA 1177 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +++ +II +A +L LQ +AEGVE Q +A G QG+LF+RPLP E F +L Sbjct: 1178 AILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALFLAN 1237 Query: 662 K 662 K Sbjct: 1238 K 1238 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 155/580 (26%), Positives = 258/580 (44%), Gaps = 31/580 (5%) Query: 104 RPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIY 163 R ++ T ++ + A + A ++ +D V L Sbjct: 823 RGEVILHTLWRDISERRVTETRLRLLAAAFEHSAEAIMVSDRDNRILEVNDAFCRLTGYA 882 Query: 164 LLLS------LILTVAISWCINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQ 213 L+ + S R + + + + L++ + Sbjct: 883 ADEVRGSDPRLLSSGRTSAEEYRTMWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTI-- 940 Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 G + +R E+ + A ++DLPN++ L L+Q +A + Sbjct: 941 RGAEGNTEYYIGSFVDISERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREG 1000 Query: 270 ----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIA 325 A+M + + ++ L + LLL + +L+S + ++A++ G +F V+ Sbjct: 1001 HGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVL 1060 Query: 326 NGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAA 384 G + A + ++L +S IE L SIG+A+F D E L A +A Sbjct: 1061 TG-ADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAM 1119 Query: 385 FTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAE 444 + A+ G+N +QFF EAA R E D+ AL+ QF + QPQV+ ++ + E Sbjct: 1120 YHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQFVLHYQPQVDAQ-RRVFAVE 1178 Query: 445 VLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ--ERGIMLPLSVN 502 LLR Q P P + E GL+V +G WVLE +C + AW R L ++VN Sbjct: 1179 ALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVN 1238 Query: 503 LSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVA 562 +SA Q P+ V + + + P L LE+TES +D+ + + ++ GV + Sbjct: 1239 VSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFS 1298 Query: 563 LDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMI 619 +DDFG GY+ L ++ LP+D LKID+ FV LP D+ + I+ + +SL L+++ Sbjct: 1299 MDDFGTGYSS---LSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVV 1355 Query: 620 AEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 AEGVETEAQR +L G QGFLF+RPL ++ FE+ Sbjct: 1356 AEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQ 1395 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 132/472 (27%), Positives = 223/472 (47%), Gaps = 16/472 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLP 251 N E+ L L + D G + + + + A ++DLP Sbjct: 343 NRRKNGEIFPELLTLSVV--RDHNGKVSHYVGVFSDISRMKETEARLQRLAHYDALTDLP 400 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL L V R Q A++ + + ++ L + LL+ + +L+S + Sbjct: 401 NRVLLNLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRI 460 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSIGVAM 366 LA++ G +F ++ + ++ Q+++ ++++ + ++ SIG+++ Sbjct: 461 RAEDTLARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISL 520 Query: 367 FYGDLTAEQ-LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D L S A +A + A+ G+N +F+ AA +RL E+ + LE +F Sbjct: 521 YPLDTDDATQLISNADAALYQAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEF 580 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QP V + G++V AE L+R P P I E GL+V +G WVLE +CR Sbjct: 581 VLHFQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACR 640 Query: 486 LLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 W + G L ++VNLS Q ++ A + ++L R L LE+TES ++D Sbjct: 641 QGREWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDAD 700 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSS 602 AVA L L+ GVR+++DDFG GY+ L ++K +D LKID+ FV + D Sbjct: 701 RAVATLAALKGLGVRLSIDDFGTGYSS---LAYLKRFAVDALKIDRSFVRDIADDENDRM 757 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 ++A ++ +A + L +IAEGVET Q +L G QG+L RP F Sbjct: 758 IVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADF 809 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 132/484 (27%), Positives = 229/484 (47%), Gaps = 20/484 (4%) Query: 194 NAIPAKELVGHQLALPRLHQD----DEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPV 247 N E+ L + + D DE + + ++ + + A P+ Sbjct: 307 NRRKNGEIYPQWLTINAVCIDSSCCDESNS-CNYVGVFTDISQIKQSEAQLAQLAHYDPL 365 Query: 248 SDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKL 303 + LPN+ L L Q + R Q ++ I + ++ L + LL+ L E++ Sbjct: 366 TGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIKLAERM 425 Query: 304 KSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSI 362 K + LA++ G +F ++ V++ + Q ++ +++ + ++ + SI Sbjct: 426 KKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIFINASI 485 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+++F D A +L + A + A+ +G+N ++ AA +RL E+ + AL Sbjct: 486 GISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYHTEALSVAANERLIMENRLRYALS 545 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 + + QP V+ +G +V E L+R Q P + P I E GL+V +G WVL Sbjct: 546 AEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIVPLGEWVLR 605 Query: 482 ESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +C+ AW + G+ L ++VNLS Q N+V + +L ++ L LE+TES Sbjct: 606 TACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELELTESMF 665 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG- 599 ++ ++ L L+ GV +A+DDFG GY+ L ++K PID LKID+ FV L Sbjct: 666 MEHVEQSIETLNKLKTLGVHLAIDDFGTGYSS---LIYLKRFPIDKLKIDQRFVRDLADD 722 Query: 600 --DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 D + A II +A+ L L ++AEG+E+E Q +L + QG+LF RP+P E Sbjct: 723 HNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIELEAW 782 Query: 658 YLEE 661 E Sbjct: 783 LREH 786 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 159/566 (28%), Positives = 271/566 (47%), Gaps = 29/566 (5%) Query: 118 VQISLGVYSLERPANPQPIAY----LVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA 173 V+ S Y L P I + LV+ + R+ + + +++ I L + L+ A Sbjct: 255 VRESEERYRLLLSHLPVGIFHYNTDLVITYCNDRLAELLHNSVE--HVIGLDMKLVKDQA 312 Query: 174 ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 I + + + N A + + H D G + + Q + + Sbjct: 313 ILPSLRKALEGERSNFEGHYLATYSDAEGWAYITCTPFH--DHNGQIAGGIAIVQDITEH 370 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E+ N A P++ LPN+ LL++ L+ +A AL+ I + + L Sbjct: 371 KAAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALNDTL 430 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVL 342 ++LL + ++L S + +A++ G +F V+ + + +G+++L Sbjct: 431 GHDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGEKIL 490 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQ 401 ++ + + R SIG +F G A E+L RA A + A+ G+N ++FFD Q Sbjct: 491 AMLGLPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQAGRNTVRFFDQQ 550 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 +A R+ E ++ AL+ QF + Q QV+ SG+ + AE L+R P+ PD Sbjct: 551 MQDAVTARVALEGELHKALDRQQFRLHYQIQVD-ASGRPLGAEALIRWMHPERGLVPPDQ 609 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNLSALQLMHPNMVADMLE 519 I E L++ +G WV++ +C L WQ+ L L+VN+SA Q + V + Sbjct: 610 FIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRA 669 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 + R+ I P L LE+TES +++ + + L+ GV+ +LDDFG GY+ LQ++ Sbjct: 670 TVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSS---LQYL 726 Query: 580 KSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 K LP+D +KID+ FV + D ++ II +AQ+L L +IAEGVETE QR +L G Sbjct: 727 KRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNG 786 Query: 637 VGIAQGFLFARPLPIEIFEESYLEEK 662 QG+LF +P+P+E FE ++ Sbjct: 787 CTHFQGYLFGKPVPVEQFEAMLQPDR 812 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 138/483 (28%), Positives = 244/483 (50%), Gaps = 14/483 (2%) Query: 187 RNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFP 246 + + + + +++ + ++E + ++ + +++ +E + Sbjct: 281 KQVFETRHQRKDGRIFPVEVSASQCLFNNEENHVAFVRDIT--IRKKYEKELEHQSNHDA 338 Query: 247 VSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ L N+ LL + ++Q + + TA+ ++ + + L +Q + +LL + E+ Sbjct: 339 LTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAER 398 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + +SP L+++ G +FA++ V P A + Q++L + P+ +LR SI Sbjct: 399 LSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSI 458 Query: 363 GVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G +++ D +E L A +A + A+ +G N QF + A K L E D+ AL+ Sbjct: 459 GASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGDLRQALQ 518 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 F + QP+V++ SGK+ E L+R PD PD I E GL++ +G WVL Sbjct: 519 LGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLR 578 Query: 482 ESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 E+CR AWQ +G+ + ++VNLSA Q + + V + +L + I P L LE+TES Sbjct: 579 EACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMV 638 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 ++DP +L L+ G ++LDDFG GY+ L +++ PID LKID+ F+ + D Sbjct: 639 MEDPDRIAKLLAELKQIGFALSLDDFGTGYSS---LNYLRRFPIDCLKIDRSFILDVASD 695 Query: 601 ---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 +S+ ++I +A SL + IAEGVET Q +LA QG+LF++PLP Sbjct: 696 ATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPANDLAAL 755 Query: 658 YLE 660 Sbjct: 756 LAN 758 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 720 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 149/479 (31%), Positives = 241/479 (50%), Gaps = 17/479 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYE--EQNENAMRFPVSDLP 251 N E+ L + + +E G + + ++ + A P++ LP Sbjct: 268 NRRKNGEIYNEWLTIHAV--RNESGGIENCIAIYAEITDQRAAASRIQFLAHYDPLTLLP 325 Query: 252 NKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ALL + + Q +A A++ + + + L + LL + ++LK+ + Sbjct: 326 NRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRLKASV 385 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A+ G +F V+ V A + +++ M + +P+ L SIG+++F Sbjct: 386 REDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVLNVSFSIGISVF 445 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D + L A A + ++ G+NQ QFF A +RL E+D+ A+E +F Sbjct: 446 PDDAMDPDTLIRNADIAMYRSKASGRNQFQFFTADMNAHALERLALENDLHRAVERGEFR 505 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QPQ E SG ++ AE LLR Q P P I E GL+V +G WVLE +C+ Sbjct: 506 LMFQPQFE-GSGSIIGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQ 564 Query: 487 LAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 + AW++ G+ + +SVN+SALQ N++ + LL I+PGTL LE+TES + D Sbjct: 565 VRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHV 624 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG--DS-S 602 A ++ L+ GVR+A+DDFG GY+ L +++S PI LKID+ FV L D+ + Sbjct: 625 ATSGLMSELKEMGVRMAIDDFGTGYSS---LSYLRSFPISKLKIDQSFVRDLSDGGDAGA 681 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + AII LA++LN+++IAEGVET Q +L QG F++P+ E F E E Sbjct: 682 ITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEKFAELLRAE 740 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 132/461 (28%), Positives = 216/461 (46%), Gaps = 15/461 (3%) Query: 213 QDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT- 269 D + G+ + + +R E A ++ LPN+ L+ L Q++ + Sbjct: 367 DDPQSGLPAHYVWILADITERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRH 426 Query: 270 ---TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN 326 A+M I + + L + +L + +L ++L +A++ G +F +I Sbjct: 427 GWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILP 486 Query: 327 GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 + P A + ++++ +S + E +L SIG+++F D + + A +A + Sbjct: 487 SISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMY 546 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ G+N QFF A +RL E + +A+ ++ ++ QPQ E Sbjct: 547 HAKAAGRNNYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEA 606 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLS 504 LLR P P I E G++V +G WVL +C +A W G+ L ++VN+S Sbjct: 607 LLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVS 666 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 A QL + + LT + L LE+TES +++P A+ IL L GV +A+D Sbjct: 667 ARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAID 726 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L ++K PID LKID+ FV + D ++ I LA SL L +IAE Sbjct: 727 DFGTGYSS---LAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAE 783 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLP-IEIFEESYLEE 661 GVETE Q + L G QGFLF++PL F + + Sbjct: 784 GVETEDQHELLRANGCDEVQGFLFSKPLTGAAAFAFLHARD 824 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 153/590 (25%), Positives = 253/590 (42%), Gaps = 27/590 (4%) Query: 92 QFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKF 151 + Q ++ V + + E S S +R AN Q IA L + Sbjct: 276 ERQVEARTENLTEVVRQLRREIEERTRVESALRLSEQRLANAQRIARLG-HWEWEIATGR 334 Query: 152 VMSTLSTLVTIYLLLSLILT--VAISWCINRLILHPLRNIARELNAIPAKELVGHQLALP 209 + + + L I L+ + H++ P Sbjct: 335 LYWSAEVYNLLGLGPEFTTPDYERFLEMIPGDDRQRLQEAIARCLEHGLPYEIDHRITCP 394 Query: 210 RLHQD----------DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLM 257 + D+ G + Q + +RH A PV+ LPN+ L Sbjct: 395 DGSERILHEDGELVYDDEGKPLLLRGTAQDITERHDYQNRLRHLANFDPVTGLPNRTLFK 454 Query: 258 EMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL 313 + L+ +A AL+ + + ++ L + LL E+L + + Sbjct: 455 DRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAERLLGCVREGDTV 514 Query: 314 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT- 372 A+ G +F ++ ++ A ++V+ M + + + SIG++++ D Sbjct: 515 ARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEH 574 Query: 373 AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQ 432 E L A SA + A+ +G +F+ P A +RL ++ + ALE QF + QPQ Sbjct: 575 PEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHYQPQ 634 Query: 433 VEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE 492 +++ SG++ E L+R Q P+ P I E GL+ +G WVL + R + WQ+ Sbjct: 635 MDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQD 694 Query: 493 RGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAIL 551 RG+ L LSVNLS Q HP++ + +L ++ L LE+TE I D V L Sbjct: 695 RGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTL 754 Query: 552 RPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAII 608 + GVRV++DDFG G++ L ++K LP+ LKID+ FV+G+ D+++ A+I Sbjct: 755 SRIARLGVRVSIDDFGTGHSS---LAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVI 811 Query: 609 MLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 L ++L LQ+IAEGVET Q +L + G QGF ARP+P Sbjct: 812 ALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTGWL 861 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 146/469 (31%), Positives = 236/469 (50%), Gaps = 14/469 (2%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDLPN 252 +L L + ++E G + + + R + A ++ LPN Sbjct: 224 ERENGAQQSVELFLAPV--ENESGDVTHFIGVLNDVTARTHAEKRLIHQASHDALTGLPN 281 Query: 253 KALLMEMLEQVVARKQT--TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 + LL + + +AR + TA+M + + + A + L+ + ++ + L Sbjct: 282 RNLLNDRITHAIARSRGRLTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAG 341 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 +A++ G +F V+ + A L ++ +SE + I ++L SIGVA+ D Sbjct: 342 DTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRD 401 Query: 371 L-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 E L A A + A+ +G+N F+ P+ A++RLT ES++ AL + Sbjct: 402 GRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELEAHY 461 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QPQV++ +G L AE L+R + P+ LP I E GL+V +G VL +CR Sbjct: 462 QPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTR 521 Query: 490 WQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAV 548 W+E G L ++VNLS Q ++V + ++L L LE+TES + D +V Sbjct: 522 WREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSV 581 Query: 549 AILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIA 605 A L LR G+ +A+DDFG GY+ L ++K PID LKID+ F++G+P D++++ Sbjct: 582 ATLAGLRRQGIALAIDDFGTGYSS---LSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQ 638 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 AII +A+SL L ++AEGVET AQR++L G QGFLF R +P E F Sbjct: 639 AIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 140/476 (29%), Positives = 240/476 (50%), Gaps = 17/476 (3%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKA 254 V + +L H DE ++ +++ + + +R E+ A ++ LPN+ Sbjct: 263 KDGRSVIVEGSLSCAHGGDESSVI---WSICRDITERKHAEEQLYRLAHHDTLTGLPNRI 319 Query: 255 LLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 L M+ L+Q A A++ + + + L + LL + ++ + Sbjct: 320 LFMDRLQQAKALANRYRYQVAVLFLDLDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREV 379 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 +A+I G +F +I V +GQ++L ++ I+ +L SIG+++F D Sbjct: 380 DTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAPFNIDTHELFVTASIGISLFPSD 439 Query: 371 LTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 +QL +A A + + +G+N +QF+ PQ A KRL E+ + AL+N +F ++ Sbjct: 440 GDNLDQLVKKADIAMYCVKGEGRNNVQFYSPQMDANADKRLLLETSLRKALDNREFRVYY 499 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QP+V++ S ++ + E L+R P P I E GL++ +G WVL +C Sbjct: 500 QPKVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAEETGLIIPIGEWVLRAACFQNCE 559 Query: 490 WQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAV 548 W +GI + ++VNLS Q N++ + +L + L LE+TES + +P AV Sbjct: 560 WVRQGIPPMRVAVNLSGYQFQQKNLLETIRGILDETGLTADLLELEITESVIMQNPDFAV 619 Query: 549 AILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIA 605 ++L LR+ GV +++DDFG+GY+ L H+K ++ LKIDK FV + +S ++ Sbjct: 620 SVLNQLRDLGVHISIDDFGIGYSS---LAHLKRFSVNTLKIDKSFVRDVEINSADAAIAT 676 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 AII + SLNL++IAEGVETE Q +L+ QG+LF+ P+P E E E Sbjct: 677 AIIAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLFSTPMPPEKVAEFMREH 732 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 148/487 (30%), Positives = 238/487 (48%), Gaps = 18/487 (3%) Query: 187 RNIARELNAI-PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAM 243 R ++RE+ I E G +L+ + +E G + + + + R E+ A Sbjct: 330 RAVSREVERILDDGEPSGLRLSAFPV--FNEQGKATKFIKVVEDITDRKRAEEKIRRLAY 387 Query: 244 RFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTL 299 ++ LPN+ L+M+ L Q + + AL+ + + +D + LL + Sbjct: 388 YDSLTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEV 447 Query: 300 VEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPH 359 +L LA++ G +F +IA GV+ A L ++L ++E ++R L Sbjct: 448 AARLSGCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIA 507 Query: 360 CSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILN 418 SIG+ +F D E L RA A + A+ +G N +FF + A +R E D+ Sbjct: 508 TSIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMRQ 567 Query: 419 ALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHW 478 AL N +F + QPQV + K+V E L+R P LP I E G + +G W Sbjct: 568 ALTNGEFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRW 627 Query: 479 VLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 VLEE+CR A WQ G+ L + VNL A Q H +V + ++L + + L +E+TE Sbjct: 628 VLEEACRQGAQWQHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTE 687 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 + + D AV+ L L+ GVR+A+DDFG GY+ ++K P+D +KID+ F+ + Sbjct: 688 TMLM-DSETAVSTLGQLKALGVRLAIDDFGTGYSSF---NYLKHFPLDRIKIDQSFIRDI 743 Query: 598 P---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 G+ ++I AI+ +A+SL +++AEGVETE Q +L QGF F+RPL + Sbjct: 744 GQSRGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLPDDV 803 Query: 655 EESYLEE 661 E Sbjct: 804 SRLIRES 810 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 133/499 (26%), Positives = 244/499 (48%), Gaps = 20/499 (4%) Query: 179 NRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ-- 232 +R I L R N E + L ++ +E G ++ + + + Sbjct: 486 HREIWKALTREGRWRGEFWNQRKNNEQYAEWVTLTAVN--NEEGKVINYVGVFADISEIK 543 Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLK 288 NE R P++ LPN+ L+ E+L+ + + AL+ + + + L Sbjct: 544 HSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEIALLFVDLDRFKAINDTLG 603 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 + LL + +++++ + +A++ G +F V+ + ++E A + +++++ + Sbjct: 604 HQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLREREDAAKVAKKIISSLQNE 663 Query: 349 LPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 I+ +L S+G++++ D + L A A + ++KGKN F+ + A Sbjct: 664 FLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYSADLSQNAV 723 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +R T E+ + AL QF ++ Q QV + +G+++ AE L+R P+ P I E Sbjct: 724 ERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAE 783 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL++ +G WVL +S + W ++G + +SVN+S +Q+ N + +L Sbjct: 784 ETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVETDC 843 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 + L LE+TES + + + + +++ GVR+A+DDFG GY+ L H+K LP+D Sbjct: 844 ESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSS---LSHLKRLPLDK 900 Query: 587 LKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 +KID+ FV LP D+++ AI +AQSL +IAEGVET Q +L K G QG+ Sbjct: 901 IKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGY 960 Query: 644 LFARPLPIEIFEESYLEEK 662 L++RP+ F E+ Sbjct: 961 LYSRPVTASEFTALLRAEQ 979 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 137/477 (28%), Positives = 231/477 (48%), Gaps = 16/477 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPN 252 E++ ++ D G L+ + + +R E A ++ LPN Sbjct: 228 HRRNGEVIWISENARSVYNSD--GTLLFFEGTVEAITERKLHEAEIQFQATHDALTGLPN 285 Query: 253 KALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + LL + ++Q V + TA+ + + + L + LL ++L S L Sbjct: 286 RTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLR 345 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 +A+ G +F ++ Q+VL +S+ ++ + CSIG+ + Sbjct: 346 ESDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCP 405 Query: 369 GDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 D AE L A SA + A+ G+N Q+F + + RL + + A+ N F + Sbjct: 406 DDGRDAETLLKNADSAMYKAKELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVL 465 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 QP+V + S +++ AE L+R P I E GL++ +G WVL +CR Sbjct: 466 HYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQN 525 Query: 488 AAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 AWQ+ G +P+SVNLS QL ++V + +LT ++ L LE+TES D Sbjct: 526 RAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEK 585 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSM 603 + A+L LR+ GV+++LDDFG GY+ L ++K P+D LKID+ FV + D +++ Sbjct: 586 SFALLTQLRSLGVKISLDDFGTGYSS---LSYLKRFPVDTLKIDQSFVRDIATDQDSAAI 642 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 + AII L ++LNL ++AEG+ETE Q +L G QG+L ++P+P + F + + Sbjct: 643 VKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 136/514 (26%), Positives = 242/514 (47%), Gaps = 21/514 (4%) Query: 161 TIYLLLSLILTVAISWCINRLILHPLRNI-------ARELNAIPAKELVGHQLALPRLHQ 213 +LL I+ L+ P++ + RE + G +L + + Sbjct: 347 ATCVLLGFSRNELTGADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVEAMAT 406 Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 G + + R EE A ++ LPN++LL + L Q VA + Sbjct: 407 QVPHGDDQALCLMFHDITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRG 466 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 AL++ + + L + LL ++ +++S + A++ G +F ++ Sbjct: 467 QMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTN 526 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFT 386 + A+T+ + +++ + ++ S+G+++F D E L +A +A + Sbjct: 527 LTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTAMYH 586 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 + G+N QFF + + RLT E+ + ALE + + QP++E +G +V E L Sbjct: 587 IKESGRNSFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEAL 646 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSA 505 +R PD P I E GL+V +G WVL +C W G L +SVN+SA Sbjct: 647 VRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISA 706 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q + + V ++ ++ + + P + LE+TE+ + V I+ LR G+ +++DD Sbjct: 707 RQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDD 766 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K P+DVLKIDK F++ + D++++A II +A ++++++AEG Sbjct: 767 FGTGYSS---LNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEG 823 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 VET Q L + QGF F+RPLP E FE Sbjct: 824 VETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFER 857 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 132/481 (27%), Positives = 232/481 (48%), Gaps = 17/481 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLP 251 N + ++ L + + D + + ++ A ++ LP Sbjct: 644 NRRRSGDIYPQWLTISTVFND--RNEPCNYVGVFTDITQIKQSEARLAHLAHYDALTGLP 701 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L+ L + A + + + ++ L + LL+ L +LK L Sbjct: 702 NRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRL 761 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSIGVAM 366 LA++ G +F V+ +++ + Q ++ +++ + ++ + SIG+++ Sbjct: 762 REEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISL 821 Query: 367 FYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D +L A A + A+ +G+N ++ AA +RL E+ + AL +F Sbjct: 822 FPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEF 881 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QP ++ G+++ E L+R Q PD + P I E GL+V +G WVL +C Sbjct: 882 VLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACA 941 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 AW + L ++VNLS Q N+V + ++L ++ L LE+TES ++ Sbjct: 942 QGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHA 1001 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 ++ IL+ L++ GVR+++DDFG GY+ L ++K PID LKID+ FV GL P D Sbjct: 1002 EQSIEILKTLKSLGVRLSIDDFGTGYSS---LTYLKRFPIDKLKIDQSFVHGLAYDPNDR 1058 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + A II +A++L L ++AEGVE+E Q D L + G QG+LF RP+P + E + E Sbjct: 1059 EIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQELEVWFREN 1118 Query: 662 K 662 K Sbjct: 1119 K 1119 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 151/501 (30%), Positives = 238/501 (47%), Gaps = 28/501 (5%) Query: 178 INRLILHPLRNIARELN----AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 R + + E+ L++ + G + + + +R Sbjct: 329 FYREMWETIHRTGAWQGEIWGRRKNGEVYPKWLSISAVV--GTNGRVSHYIGTHNDITER 386 Query: 234 HYEEQNE--NAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E+ A ++ LPN+ LL++ L+Q + AL+ I + + L Sbjct: 387 KKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTL 446 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVL 342 + LL + +L + +A++ G +F V+ + + T+ +++L Sbjct: 447 GHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEAAQDTETVAEKIL 506 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +++ + + SIG +F G L + L +A + + A+ G+N ++FFDP Sbjct: 507 ATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPS 566 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 A + R E D+L AL QF + Q Q M +L AEVLLR Q P P Sbjct: 567 MEIAVKVRAEMEDDLLRALAEKQFLLHYQAQ--MVGERLTGAEVLLRWQHPQRGMVSPAE 624 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNLSALQLMHPNMVADMLE 519 I E GL++ +GHWVLE +C LA W R L L+VN+SA Q + V +L Sbjct: 625 FIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLG 684 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 +L + P L LE+TES +++ + + L++ GV +LDDFG GY+ L ++ Sbjct: 685 VLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSS---LSYL 741 Query: 580 KSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 K LP+D LKID+ FV + D+S+ I+ LA SL L +IAEGVETEAQRD+LA +G Sbjct: 742 KRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSG 801 Query: 637 VGIAQGFLFARPLPIEIFEES 657 QG+ F+RPLPIE FE Sbjct: 802 CHTYQGYYFSRPLPIEDFESF 822 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 133/480 (27%), Positives = 236/480 (49%), Gaps = 17/480 (3%) Query: 191 RELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVS 248 +N E + + + + D G + + + + + A ++ Sbjct: 381 EFINRRHNGEERIDLVRVSPVREAD--GRITHYLAIEEDITNQKNAQARIESLAHFDVLT 438 Query: 249 DLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLK 304 LPN+ALL E ++ + + T A+M + + ++ L + LL+ L ++L+ Sbjct: 439 GLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLR 498 Query: 305 SVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGV 364 +VL L+++ G +F ++ G A + Q+++ ++E I +L SIG+ Sbjct: 499 AVLRRDDTLSRLGGDEFVLLLPG-ANRESAKKIAQELMRAINEPYRIGSHELNVMASIGI 557 Query: 365 AMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENH 423 A++ D E L A A + A+ +G+N + F + + + L + + A+ Sbjct: 558 AVYPADGMDFETLCKNADVAMYRAKQEGRNAYRSFTQEMQAYSTRYLQVLNALRQAIAQE 617 Query: 424 QFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEES 483 Q + QPQ+ + SG ++ AE LLR P+ P I E GL++ +G WVL + Sbjct: 618 QLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVA 677 Query: 484 CRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRID 542 W + G+ L ++VNLSA+Q H + ++++L P L LE+TE + Sbjct: 678 VAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMH 737 Query: 543 DPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS- 601 DP A+A++ L GVR+++DDFG GY+ L ++K LKID+ FV + D+ Sbjct: 738 DPQGAIAMMNSLHERGVRMSIDDFGTGYSS---LSYLKQFKAYKLKIDQSFVRDISTDAE 794 Query: 602 --SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 ++++AII +A++L LQ IAEGVET Q+ +L + G AQG+ +++PLP FE L Sbjct: 795 DKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADFETFIL 854 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 144/638 (22%), Positives = 271/638 (42%), Gaps = 34/638 (5%) Query: 51 RSVREPLSSAILKGDIPEAEAILASIKPA----GVVSRADVVLPNQFQALRKSFIPERPV 106 + ++ +L D + G++ A+ P + Sbjct: 309 DIRHDSWAAGMLSHDSQIKRFLALPFYHHNSLLGIIGIANRDKPYDKSLINYLNPLLSTC 368 Query: 107 PVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLL 166 ++ + + + V+ D+ V + + Sbjct: 369 GSILDAYHNDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDV--NEAFTHITGIAR 426 Query: 167 SLILTVAISWCINR--------LILHPLRNIARELNA----IPAKELVGHQLALPRLHQD 214 S I+ +S + + H +++ + E+ + + Sbjct: 427 SEIMGRHLSTLQTKQEKPISFQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNS 486 Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 E + + + R EQ A ++ LPN++L ++ LE + Q Sbjct: 487 KE--EITHFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHH 544 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 A++ I + + L +ILL + E+++ + +A++ G +F VI Sbjct: 545 RIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENF 604 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTA 387 + + Q++++ + I+ +L SIGV+++ D A L RA +A + A Sbjct: 605 TDTSAISLITQKIISACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQA 664 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + +GK+ QFF + AA ++L ++ + AL +F ++ QP + M SG +VS E L+ Sbjct: 665 KKRGKSCCQFFTTEINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVSVEALI 724 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW-QERGIMLPLSVNLSAL 506 R P+ P+ I E GL++ +G WVL+ +C W Q + +++NLSA Sbjct: 725 RWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLSAR 784 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 QL + + E+L + L LE+TES I+ +++ L L+ G R++LDDF Sbjct: 785 QLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLDDF 844 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L ++K PID +KID+ FV+G+ P D+++ A+ +A SL +IA+GV Sbjct: 845 GTGYS---PLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGV 901 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ET Q ++L + V AQG+ + P+P E + E+ Sbjct: 902 ETREQLNFLNEIKVDEAQGYFISYPVPAEELTQKLREK 939 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 172/643 (26%), Positives = 279/643 (43%), Gaps = 23/643 (3%) Query: 37 QNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAG---VVSRADVVLPNQF 93 + L + ++ + A L+ + + L ++ G + V++ ++ Sbjct: 770 RQLGRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDCLRADGRKIPIELRIVLMWDEH 829 Query: 94 QALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVM 153 R + EL + ++ +S P Y+V DSF Sbjct: 830 DRFEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYS 889 Query: 154 STLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQ 213 LL + + + H L EL + + + Sbjct: 890 PADVLDQQPRLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAV-- 947 Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 DE G LV + +R + A ++ LPN+ L + L + + + Sbjct: 948 RDEEGDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNG 1007 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 LM + + + L A + +L + +L + +S +A++ G +F ++ Sbjct: 1008 QWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPS 1067 Query: 328 VQEPW----HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAIS 382 + AI + + +L ++ +E + SIGVA+ D L A + Sbjct: 1068 QGDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADT 1127 Query: 383 AAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVS 442 A + A+ GKN QF+ + A +RL ESD+ ALE +F + QPQ +L Sbjct: 1128 AMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTG 1187 Query: 443 AEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLP-LSV 501 AE LLR Q P P I +E GL+ VG W+L E+C+ L +W + + +P +SV Sbjct: 1188 AEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSV 1247 Query: 502 NLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRV 561 NLSA Q + + +L I P L LE+TES + D A+ IL L+ G+ + Sbjct: 1248 NLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAI 1307 Query: 562 ALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQM 618 A+DDFG GY+ L ++K PIDVLKID+ FV+GLP D+ + AII +A SLNL + Sbjct: 1308 AVDDFGTGYSS---LNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMV 1364 Query: 619 IAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 IAEGVE++AQ D+L + G QG+LF RP+P E F Y + Sbjct: 1365 IAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYASD 1407 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 143/479 (29%), Positives = 236/479 (49%), Gaps = 16/479 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDL 250 N L +QL + + D G + + R+ E+ A ++ L Sbjct: 555 RNYRKDGALFWNQLYIAPVP--DADGQTTHHIAVINDVTALIRYQEQLEYQANYDSLTRL 612 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ LL + L+ + Q A++ I + ++ L + + LL + ++L Sbjct: 613 PNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARC 672 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 +A+ G +F ++ + I ++V +SE + ++ +L CS+G ++ Sbjct: 673 ARASDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASL 732 Query: 367 FYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D AE L +A A + A+ G+N QF+ P+ +A RL E + AL +++F Sbjct: 733 FPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRDNEF 792 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QPQV++ +G++V E L+R P+ P I E GL+ + WVL E+CR Sbjct: 793 LLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACR 852 Query: 486 LLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 AWQ+ G+ +SVNLSA Q ++ ++++L + P L LE+TES + + Sbjct: 853 QNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNA 912 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 AV++L L G+ +A+DDFG GY+ L ++K P+D LKID+ FV + D Sbjct: 913 EEAVSMLNELHALGIGLAIDDFGTGYSS---LSYLKRFPVDRLKIDRSFVSDIGESSDDE 969 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++ +AII LA SLNLQ+IAEGVET Q D+L + QG+ FA+PLP Sbjct: 970 TITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQR 1028 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 716 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 143/502 (28%), Positives = 248/502 (49%), Gaps = 27/502 (5%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 + + ++ N ++ L + + D G +V + Sbjct: 513 FYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAV--KDAGGNVVNYVATLMDITAS 570 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 EE A P++ LPN+ LL + L+Q +A A++ I + ++ L Sbjct: 571 KASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFIDLDNFKNLNDTL 630 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVL 342 ++LL + +L S + +A+I G +F V+ + + ++G ++L Sbjct: 631 GHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDLSDNILDAAEQTESVGSKIL 690 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQ 401 ++ + SIG +F + + ++L +A A + A+ G+N ++FFDP+ Sbjct: 691 ASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQAKKAGRNTMRFFDPR 750 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 ++ RL E ++ A+E QF ++ Q QV+ + + + AE LLR P+ P Sbjct: 751 MQQSLSARLALELELRKAIEKDQFQLYYQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAE 809 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLE 519 I E GL+V +G WVLE +C L AW++ + L LS+N+SA Q P+ V + Sbjct: 810 FIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQA 869 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 + Y I P L LE+TES +++ + + L+ GV +LDDFG GY+ LQ++ Sbjct: 870 AVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSS---LQYL 926 Query: 580 KSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 K LP+D LKID+ F++ + DS ++++ II +AQS+ + +IAEGVETE QR L + G Sbjct: 927 KRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKG 986 Query: 637 VGIAQGFLFARPLPIEIFEESY 658 QG+LF++P+P+E FE+ Sbjct: 987 CNHFQGYLFSKPVPVEQFEKLL 1008 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 716 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 128/476 (26%), Positives = 227/476 (47%), Gaps = 17/476 (3%) Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNK 253 E + + DE G + + + +R E A ++ LPN+ Sbjct: 575 RKNGEHFLSWQTVIPV--KDENGDTQQIIYIFSDITERKLFEEHIYNLAHHDSLTQLPNR 632 Query: 254 ALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSP 309 + + R + A+M I + + ++LL + E+ K L Sbjct: 633 VAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRK 692 Query: 310 RMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG 369 ++++ G +F V+ + + + +++L E + ++ SIG+ +F Sbjct: 693 EDVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPD 752 Query: 370 DLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIW 428 + + L A SA + A+ KG+N QF+ + + AQ+RL E D+ ALE +F + Sbjct: 753 NGDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMNQYAQERLELELDLRKALERDEFVLH 812 Query: 429 LQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLA 488 QPQ + +G+++ E L+R Q PD P I+ E GL+V +G WV++ +C Sbjct: 813 YQPQFD-PNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHK 871 Query: 489 AWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 W +G L +SVNLS Q +H +++ + +T I P L LE+TES + + Sbjct: 872 MWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELELTESIMMVNVEET 931 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMI 604 + L + + G+ +++DDFG GY+ + +K P++ LKID+ FV GLP D +++ Sbjct: 932 IRTLNAISSLGIHMSIDDFGTGYSSM---SCLKRFPVNKLKIDQSFVRGLPQDKEDVAIV 988 Query: 605 AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +II++A +LNL +IAEGVET Q ++L + QG+ F+RP+ E+ Sbjct: 989 KSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQYLQA 1044 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 716 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 132/478 (27%), Positives = 225/478 (47%), Gaps = 16/478 (3%) Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNK 253 + QL+ D G + + + Q + +R E E A ++ L N+ Sbjct: 206 RKDGSVFWAQLSST--WFFDANGNPLYTVPVIQDITRRKEAEERIRELAYYDSLTGLANR 263 Query: 254 ALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSP 309 L + L+QV+AR + ALM + + + L A + +L E+L L Sbjct: 264 TLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVNDTLGHAVGDAMLRQAAERLNECLRE 323 Query: 310 RMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG 369 +A++ G +F +I + +E + + ++L +S + ++ S+G+A++ Sbjct: 324 NDTVARLGGDEFVIILSDYKEDANLPRVADKILKALSSPFDLGVREVYSSTSVGIAIYPD 383 Query: 370 DLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIW 428 D A L A A + A+ G + +F+ + A R+ E+++ ALE +F I Sbjct: 384 DGDEATDLLRHADMAMYAAKESGGDTFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIE 443 Query: 429 LQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLA 488 QPQ+++ + K+ E LLR Q P P I E L++ +G WV+ Sbjct: 444 YQPQIDLITNKVAGVEALLRWQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCV 503 Query: 489 AWQERG-IMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 W++ G + + +N+S Q + P+ V + LL P L E+TES + D AA Sbjct: 504 MWKQEGYLPFRVGINVSGRQFVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDAA 563 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMI 604 V L L+ G+ +A+DDFG GY+ L +K LP++ LKIDK F+ L D +++ Sbjct: 564 VLTLEALKKLGINMAIDDFGTGYSS---LSCLKHLPLNRLKIDKSFISDLQDNADDRAIV 620 Query: 605 AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 A I +A+ L L + AEGVETE Q ++ K QGF F+RPL +++L ++ Sbjct: 621 EATIAMAKRLELGVTAEGVETEGQYGFVQKRECDEVQGFYFSRPLSPSEVADAWLIKR 678 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 715 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 137/499 (27%), Positives = 243/499 (48%), Gaps = 21/499 (4%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 + + R N L L + + D G L L +R Sbjct: 551 FYATMWEAIETEGRWQGEVWNRRKDGSLYPEWLLIQTM--RDSRGTLTHYIGTFTDLTER 608 Query: 234 HYEEQN--ENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E+ A P++ LPN+ LL ++ Q ALM + + ++ L Sbjct: 609 KETEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSL 668 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + LL ++L + + + ++++ G +F ++ G + A L +++L I + Sbjct: 669 GHGVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVLPG-TDTDGAAYLAERLLNIAAR 727 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 + IER ++ SIG+AM+ D + L+ A +A + A+ G+N FF + + Sbjct: 728 QYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYCFFTTEMQARS 787 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 + L ++ + ALE +QF++ QPQ+ + + ++V E L+R P PD I Sbjct: 788 ARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIA 847 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E G ++ +G WVL+ + R L WQ+ G+ + +SVNLSA+Q HP + ++ +L Sbjct: 848 ESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAG 907 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + P L LE+TE +++P AA+ ++ LR G+R+++DDFG GY+ L ++K + Sbjct: 908 VSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYSS---LTYLKRFNVY 964 Query: 586 VLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV+ LP D ++++A+I LA SL + +AEGVET+ Q ++L G QG Sbjct: 965 SLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQG 1024 Query: 643 FLFARPLPIEIFEESYLEE 661 + +RPL + ++ Sbjct: 1025 YYLSRPLQADAVFSFIEDD 1043 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 715 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 151/476 (31%), Positives = 243/476 (51%), Gaps = 16/476 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLP 251 N E+ L + + D G+L L + + + A P++ LP Sbjct: 381 NRRKTGEVYPQLLHITAI--RDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLP 438 Query: 252 NKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL + L+ +A A+M + + + L A + LL+ + +L++ L Sbjct: 439 NRRLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASL 498 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F V+ N + P A T+ ++++ + + +E +L S+GVA++ Sbjct: 499 RDDDTVARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVY 558 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D A+ L A A + A+ +G+N Q F+P + +RL E+ + AL + Sbjct: 559 PDDSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQ 618 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QP ++ G+LV+ E LLR + PD P I E GL+V +G WVL +C Sbjct: 619 LYFQPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEH 678 Query: 487 LAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 W E G L + VN+SA Q A + +L + PG L LE+TES +DD Sbjct: 679 HRRWCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTD 738 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSS 602 A+A L LR GV +A+DDFG GY+ L ++K PID LKID++FV G+ D++ Sbjct: 739 RALARLDHLRALGVCLAIDDFGTGYSS---LAYLKRFPIDELKIDRLFVRGIDRNTRDAA 795 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 +++AI+ L SL L+++AEGVET A D L + G +AQGF F+ PLP E F ++Y Sbjct: 796 LVSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVKAY 851 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 715 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 151/638 (23%), Positives = 271/638 (42%), Gaps = 28/638 (4%) Query: 45 QLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQF-------QALR 97 QL+ + ++ D I A + + A + + Q Sbjct: 213 QLDGQQSILVTEQTNRRFINDYHIRSLIEAPLTSGDSIIGAFSLHYHNPGSWFSDSQYDF 272 Query: 98 KSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQA---DSFRMYKFVMS 154 + + + L Q S Y PI + + + R + Sbjct: 273 AHKVAKTLSMTLKNYLLYEERQKSEERYRYLFQNANDPIFIIDRELKFINVNRRAMDLFG 332 Query: 155 TLSTLVTIYLLLSLILTVAISWCINRL----ILHPLRNIARELNAIPAKELVGHQLALPR 210 ++ L+ I L + L ++ + L + P Sbjct: 333 YGLDEFVAMNMVDLVPEEQIPRIQGELKKMESMEALDKLSTNIRTKWGYSLNVEISSSPF 392 Query: 211 LHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT 270 + +++ +G + ++ + ++ +E A ++ L N+ L M+ L +++ Sbjct: 393 VERNNVMGSIHIVRDVTE--SKKMEDEIRYQATHDILTGLANRMLFMDHLALSISQGHRY 450 Query: 271 ----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN 326 A+M + + + L A + LL + +LK + +A+I G ++ ++ Sbjct: 451 NEIQAVMFLDLDRFKSINDSLGHAAGDKLLQLISGRLKECVRETDTVARIGGDEYNILIT 510 Query: 327 GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAF 385 + P A + ++L+ M++ I+ QL SIG++++ D AE L A A + Sbjct: 511 QMAHPEDATAIANKILSSMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALY 570 Query: 386 TARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEV 445 A+ +G+N QF++P +R+ E+ + ALE H+ + QPQV M +G++ AE Sbjct: 571 HAKEQGRNNYQFYNPALNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEA 630 Query: 446 LLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLS 504 L+ P+ P I E G + + WVLE +C AWQ+ G ++VN+S Sbjct: 631 LVYWLHPELGLLSPGHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMS 690 Query: 505 ALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALD 564 + Q P++V + +L + P L LE+TE + D + L L V A+D Sbjct: 691 SKQFRRPDLVDQVRRVLNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAID 750 Query: 565 DFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAE 621 DFG GY+ L +K LPI LKIDK F+ G+ P D +++A II +A +L L++IAE Sbjct: 751 DFGTGYSS---LSCLKKLPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAE 807 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 GVE Q ++L + QGFL++RP+P E F + Sbjct: 808 GVEDADQLEFLHQNHCDQMQGFLYSRPIPAEDFRRLIM 845 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 143/455 (31%), Positives = 227/455 (49%), Gaps = 13/455 (2%) Query: 216 EIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT---- 269 + G+L R Q + + A ++ LPN++ M ++ Q Sbjct: 635 QDGVLERIRGTVQDVTSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHI 694 Query: 270 TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ 329 A++ + + + L + LL + ++L L A++ G +F + V Sbjct: 695 LAVLFLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLPRVT 754 Query: 330 EPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTAR 388 A + +++L ++ + I+ +L P SIG+++F D + L A +A + A+ Sbjct: 755 RAEDAAAVARKMLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAK 814 Query: 389 HKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLR 448 G+N QFF P+ A +RL E+ + A+E ++ + QPQV TS + E L+R Sbjct: 815 EVGRNNFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVR 874 Query: 449 IQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL 508 Q PD P I E GL+V +G WVL E+CR W G+ L + VN+SALQ Sbjct: 875 WQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQF 934 Query: 509 MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGM 568 + V ++++L P + LE+TES +D A LR L N G+ +ALDDFG Sbjct: 935 RRADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGT 994 Query: 569 GYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVET 625 GY+ L ++K LPI LKID+ FV+ L P D+++ AA + LA+ L L+++AEGVET Sbjct: 995 GYSS---LAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVET 1051 Query: 626 EAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 AQRD+L G QG+L++RPL + FE Sbjct: 1052 VAQRDFLVARGCHTLQGYLYSRPLDVAAFEAWMQA 1086 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 135/455 (29%), Positives = 230/455 (50%), Gaps = 14/455 (3%) Query: 218 GMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TA 271 G Y L+ + +R E+ A ++ L N+AL + LEQ + + A Sbjct: 248 GEAPELYGLDIDISERKINEEQLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVA 307 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 ++++ + + L + + LL + ++L V+ +A++ G +F ++ V EP Sbjct: 308 VLLLDLDRFKIINDSLGHSFGDRLLSAVAQRLDRVVRDTDTVARLGGDEFVLLLAEVTEP 367 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHK 390 L ++L ++ IE ++ S+G++++ D L A A + A+ + Sbjct: 368 DDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQE 427 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G F+ P+ + A + + ES + ALE +F ++ QP+V++ SG++ E L+R Sbjct: 428 GGGVFSFYAPEMNQRAMETMEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWL 487 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLM 509 P P I E GL+V +G WVL+E+CR + AWQ G+ + ++VNLSA Q Sbjct: 488 HPRRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFR 547 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 ++ + E+L + P L LE+TES + D VA++ L GVR++LDDFG G Sbjct: 548 TGDLPGLVREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTG 607 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L H PI+ LKID+ F++ + P +++ +II +A + L+ IAEGVETE Sbjct: 608 YSSFAHLSH---FPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETE 664 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 AQ +L K G QG+L +RPLP + + Sbjct: 665 AQLAYLRKQGCDEIQGYLLSRPLPASEYAALVRRD 699 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 138/504 (27%), Positives = 238/504 (47%), Gaps = 28/504 (5%) Query: 175 SWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH 234 W + L+ +N E + ++ + + + G+ ++ + + +R Sbjct: 738 LWRVKALLKQGESVRTELVNYRKNGEEIWLEMDILPI--ANSAGVFTHWVSVQRDITERK 795 Query: 235 --YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLK 288 A +++LPN+ LL++ LEQ + AL+ + + + Sbjct: 796 AAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHG 855 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVLT 343 ++LL + ++L + + +A++ G +F V+ + E A + ++L Sbjct: 856 HDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILL 915 Query: 344 IMSERLPIERIQLRPHCSIGVAMFYGDL--TAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +S+ + + CSIGVA+F + T ++L RA A + A+ G+N +FFDP Sbjct: 916 ALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNTFRFFDPA 975 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 KR E D+ AL + ++ QPQV+ G L+ AE L+R + P P Sbjct: 976 MQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQ-GSLLGAEALVRWEHPQQGLLSPAA 1034 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM----LPLSVNLSALQLMHPNMVADM 517 I+ E GL++ +G WVL +C L AW G L LSVN+SA QL + + + Sbjct: 1035 FIELAEETGLILPIGEWVLRTACMQLVAW--AGRPETAGLVLSVNVSARQLHQHDFIDRV 1092 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 +L P +L LE+TES +++ + + L+ GV ++DDFG GY+ L Sbjct: 1093 FSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSS---LA 1149 Query: 578 HMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K LP+ LKID+ FV + D+S++ II L L ++++AEGVE+ Q+ +L K Sbjct: 1150 YLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEK 1209 Query: 635 AGVGIAQGFLFARPLPIEIFEESY 658 G QG+LF RP P E E + Sbjct: 1210 HGCLEYQGYLFGRPQPAEQLEREF 1233 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 133/491 (27%), Positives = 239/491 (48%), Gaps = 21/491 (4%) Query: 188 NIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ---------RHYEEQ 238 ARE++ + +E + ++ L + Sbjct: 297 KEAREIHEHLRAGHEKRTYEIKASPLYNEDHSIRGIIETSRDLTDILNSEAELNEKTQHL 356 Query: 239 NENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREI 294 ++ LPNK L + LE+ + TAL+ I + + L + Sbjct: 357 QFVTTHDQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQ 416 Query: 295 LLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERI 354 LL + ++L + + LA++ G +F +I ++E H T+ + + + I+ Sbjct: 417 LLQEVAKRLSTSIRKTDTLARMGGDEFLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGH 476 Query: 355 QLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEE 413 +L S+G+++ D ++L + A A + A+ G N+ QF+ + A+ R+ E Sbjct: 477 ELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRAKTRIELE 536 Query: 414 SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMV 473 S + A+ QF ++ QPQ ++ SG+LV E LLR Q P P+ I E G+++ Sbjct: 537 SYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVII 596 Query: 474 TVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 +G WVL+E+C WQ+ G + ++VN+S Q P + + ++ I+P L Sbjct: 597 EIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLE 656 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 LE+TES +DD +A+ IL+ L+ G+ +A+DDFG GY+ L ++K P+ LKID+ Sbjct: 657 LEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSS---LSYLKRFPLSRLKIDRS 713 Query: 593 FVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 FV + D+S+ A+I LA S+NL+++AEG+ET+ Q +L + G + QG+L++ P+ Sbjct: 714 FVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPV 773 Query: 650 PIEIFEESYLE 660 E F+ + + Sbjct: 774 AKEPFDHFFTD 784 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 134/481 (27%), Positives = 237/481 (49%), Gaps = 18/481 (3%) Query: 192 ELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSD 249 EL + + L++ G + + + + +R E A ++ Sbjct: 521 ELGRRDGGTVWAEVVTTLGLNRR--SGRVE-FRAVARDISERRAAEAEIQRLAHYDQLTG 577 Query: 250 LPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS 305 LPN++L+ + R+ A+M + ++ L + LL+ + +L+S Sbjct: 578 LPNRSLVKDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLES 637 Query: 306 VLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 VL + ++ G +F + + A + ++L +++ L ++ +L SIG+A Sbjct: 638 VLRGGDTVCRLGGDEFVFLLPD-TDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIA 696 Query: 366 MFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 M+ D + L A +A + A+ +G+N +FF + + L + + +AL+ Q Sbjct: 697 MYPDDGTDFDTLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQ 756 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 F++ QPQV + G++V AE LLR P+ P + E GL+ +G WVL E+ Sbjct: 757 FSLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAV 816 Query: 485 RLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 W + G+ L ++VNLSA Q +PN+ + +++ + P + LE+TE+ +DD Sbjct: 817 AQSRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDD 876 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGD 600 P +AV ++ L G+R+++DDFG GY+ L ++K + LKID+ FV + P D Sbjct: 877 PQSAVRVMDALFARGIRMSIDDFGTGYSS---LGYLKRFKVGKLKIDQSFVRDIGDDPDD 933 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++++AII LA SL + +AEGVET Q D+L + G QG+ F+RPLP E F E Sbjct: 934 KAIVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQE 993 Query: 661 E 661 Sbjct: 994 S 994 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 130/478 (27%), Positives = 240/478 (50%), Gaps = 15/478 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDL 250 LN E+ ++ L ++ G + + + +R A P++DL Sbjct: 550 LNRRKNGEVYWSITSISPL--RNDSGEITHFIANVEDINERKNAEATIEHLAYFDPLTDL 607 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ +L + LE + R + ALM + ++ + + ++LL + + V Sbjct: 608 PNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGV 667 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + ++ ++ G +FA+I + + + + + Q+++ +++ +P++ ++ SIG+A+ Sbjct: 668 VRDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIAL 727 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D + L A A + A+ +GKN +F+ + R+ E + A E + Sbjct: 728 FPRDGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYAKERQEL 787 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QP+V + SGK+ E LLR PD P I E L++ +G WVL +C Sbjct: 788 ELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACL 847 Query: 486 LLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 W+E+G++L ++VNLSA+QL P +V + ++ IQP L LE+TES +++P Sbjct: 848 QQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPD 907 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSS 602 V +L LR G +++DDFG GY+ L ++KS P+ +LKID+ FV L D + Sbjct: 908 EVVQLLERLRTLGCSISIDDFGTGYSS---LSYLKSFPVTILKIDRSFVRDLAHNSGDRA 964 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 + +++ LA +L+++ +AEGVE+E Q L + G QGF+++RP+ + Sbjct: 965 IARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQVSAVVRR 1022 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 138/489 (28%), Positives = 236/489 (48%), Gaps = 17/489 (3%) Query: 186 LRNIARELNAIPAKELV--GHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNEN 241 L I + + + G L + G + R L + +R EE Sbjct: 133 LEQILTTQRRVEQNDFLHDGRHYHLVGTPLKNHDGAISRVVLLYTDITERRAAAEEIERL 192 Query: 242 AMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLL 297 A ++ LPN+ LL + L Q++ R A++ I + ++ L + LL Sbjct: 193 AFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKEVNDTLGHGTGDQLLQ 252 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + E+L + L +A++ G +F V+ G+ E + ++L + + + ++ ++ Sbjct: 253 VVSERLTACLRSCDTVARLGGDEFVVLLPGITERDCVGDIAAKLLQSLCKPVQLDAREVF 312 Query: 358 PHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 SIG++++ D L+ A +A + A+ +G+N +F+ PQ + ++LT +D+ Sbjct: 313 TSGSIGISLWPIDGDSVSTLFKNADTAMYHAKEQGRNTYRFYTPQMHATSMEQLTLSNDL 372 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 ALE + + QPQV +G L+ E LLR P PD I E GL+V +G Sbjct: 373 RYALERGELHLCYQPQVSFETGGLIGVEALLRWIHPKLGMIPPDRFIPLAEDTGLIVPIG 432 Query: 477 HWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVL E+CR W +G+ L ++VN+SA Q + + +L + P L LE+ Sbjct: 433 TWVLHEACRQAMMWVAQGLPSLRVAVNISAKQFRESDFSDTVKAVLQTTGLAPNLLELEL 492 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TE I++ L+ L++ GV +A+DDFG GY+ L ++K P+D LKIDK FV+ Sbjct: 493 TEGMLIENVTQTKLTLQSLKDMGVTLAIDDFGTGYSS---LSYLKHFPLDRLKIDKSFVK 549 Query: 596 GLP----GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651 + ++++ A++ L SL L +IAEGVE + Q D+L QG+ F+RPL Sbjct: 550 EIAEKSGDAAAIVEAVVALGHSLKLTVIAEGVEQQDQVDFLHNRKCDELQGYFFSRPLTP 609 Query: 652 EIFEESYLE 660 + EE + Sbjct: 610 QALEELLRK 618 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 138/479 (28%), Positives = 244/479 (50%), Gaps = 17/479 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPN 252 I + E LA+ EI +++Q L+ + + ++DLPN Sbjct: 416 RGKIKSLERAKDVLAIMAARVSAEI-----EREISEQRLRDNEDHLEYLVYHDVLTDLPN 470 Query: 253 KALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + L + L+ ++ ++ I + + L + LL + +L+ + Sbjct: 471 RQLFRDRLQHAISMASLGQHQVGVLFIDLDHFKKINDSLGHEVGDRLLCEVARRLRLCIG 530 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 +A++SG +FA+I + + + I + Q+V ++E + +E +L SIG++++ Sbjct: 531 GLDTVARLSGDEFAIILDQLNNIENVILIAQEVNRRLAEMMVVEGYKLFLTASIGISLYP 590 Query: 369 GDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 GD L A +A F A+ G++ +F+ E A + L E + A++ + + Sbjct: 591 GDGKDVVSLLKCADAAMFKAKELGRDNYRFYTAGLNERASELLALEGALRQAVDKNHLVV 650 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 + QPQVE+ S +++ AE L+R Q P+ P I E GL+V++G WVL +SC Sbjct: 651 YFQPQVELASRRIIGAEALVRWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQA 710 Query: 488 AAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 WQ G + +SVN+SA Q ++V + +L + P L LE+TES ++D Sbjct: 711 RQWQVAGYPPMRISVNMSARQFRQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDG 770 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSM 603 AV L L + G+++++DDFG GY+ L ++K PI LKID+ FV + P D+++ Sbjct: 771 AVERLVELHSLGIQLSIDDFGTGYSS---LAYLKKFPIQYLKIDRSFVRDVIIDPNDAAI 827 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 A+I LA+++NL +IAEG+E + Q +L G G QG+LF+RP+P FE+ + ++ Sbjct: 828 ATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRPIPAHEFEQLLVRQQ 886 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 116/476 (24%), Positives = 232/476 (48%), Gaps = 17/476 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPVSDL 250 +N K + + + Q D G + + + + ++ E A ++ L Sbjct: 472 INRRKDKSIYIESATITPVKQAD--GKITNYVAIKEDITEKKKAEAYTENLAYFDQLTGL 529 Query: 251 PNKALLME----MLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ +L L + Q +M + + ++ L + +L+ + +++K Sbjct: 530 PNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKA 589 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + ++++ G +F ++ + A+ + ++ +S+ +E +L SIG+A+ Sbjct: 590 IREVDTVSRLGGDEFIMLFPN-TDANAAMHIATTLIQEISKASVVEHNELTITPSIGIAI 648 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D + L A +A + ++ +N F P+ +A + L E+ + +AL+ ++ Sbjct: 649 YPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNEL 708 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QPQ+ ++G+++ AE LLR P+ P I E G ++ +G WVL + R Sbjct: 709 QLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIR 768 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 W + G + ++VNLS +Q N++ + ++L ++ L LE+TE+ + DP Sbjct: 769 QTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDP 828 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 + + ++ G+R+++DDFG GY+ L ++K + LKID+ F+ + P D Sbjct: 829 ESVINVMNTFHEQGIRMSIDDFGTGYSS---LSYLKKFKVYKLKIDQSFIRDISNDPDDR 885 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 ++++AII +A +L LQ IAEGVET Q +L G QG+ F++PLP FE+ Sbjct: 886 AIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQF 941 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 125/438 (28%), Positives = 220/438 (50%), Gaps = 12/438 (2%) Query: 231 LQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 Q + A ++DLPN+AL ++ L ++ +++ + + + Sbjct: 437 RQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTINDT 496 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + + LL + +L L +A+ G +F ++ + + Q++L+ + Sbjct: 497 LGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSALE 556 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + +E +L SIG+A++ D E L A A + A+ G+N QFF Sbjct: 557 QPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRNTYQFFCSGLSNG 616 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 A +RL E + +ALE +F ++ QPQV + +GK+ E LLR + P+ +P + Sbjct: 617 APERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFMSV 676 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRY 524 E GL+V +G WVL +C WQ++G+ + ++VNLSA Q P++ + +L Sbjct: 677 AEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPDLTGMIARILDET 736 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + P L LE+TE+ I D +L+ L++ G+++++DDFG GY+ L H++ P+ Sbjct: 737 GLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSS---LAHLQQFPL 793 Query: 585 DVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 + LKID+ FV + D+ ++ A+I LA+ LNL ++AEGVE + Q + L AQ Sbjct: 794 NTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQ 853 Query: 642 GFLFARPLPIEIFEESYL 659 G++F RPL + E Sbjct: 854 GYIFNRPLEADAATEILQ 871 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 127/479 (26%), Positives = 225/479 (46%), Gaps = 16/479 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPN 252 + + + + D G + L + +R +E A P++ L N Sbjct: 554 RRSDGDRYPQWVTITAV--RDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLAN 611 Query: 253 KALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 ++LL + L++ +A + L+ + + + L + LL+ + +L S + Sbjct: 612 RSLLQDRLDRALAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVR 671 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 +A++ G +F V+ + + + + +++ ++ E + + S+G+ +F Sbjct: 672 DEDTVARLGGDEFTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFP 731 Query: 369 GDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 D + L A A + A+ GKN+ Q + P A R+ E+D+ A+E F + Sbjct: 732 DDGDDVQTLLRNADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFEL 791 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 QP V+ SG LV AE L+R + P+ P I E CGL+V +G WVL E R Sbjct: 792 HYQPIVDCASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQR 851 Query: 488 AAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 W RG L L++N+S +Q + + LL + +L+ E+TES + Sbjct: 852 RDWLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSEN 911 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSM 603 A + ++ G+ ALDDFG G++ L ++K P+D++KID+ FV P D+++ Sbjct: 912 VEARMCDIKEQGICFALDDFGTGFSS---LSYLKRFPVDIVKIDRSFVRDCPDDRNDATL 968 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 + AII +A SL L++ AEGVE+ QR++L G QG+L +PL + FE + Sbjct: 969 VEAIINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFEALMAPLR 1027 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 137/532 (25%), Positives = 251/532 (47%), Gaps = 41/532 (7%) Query: 165 LLSLILTVAISWCINRLILHPLRNIARELNAIPAK------------------------- 199 L+ + W N + P+ +I + ++ I + Sbjct: 228 FLNSVAEKLTGWQQNEALGRPIADILKVVDEITREPRGSTVERPNQLHRSTKAPSNSILV 287 Query: 200 ELVGHQLAL--PRLHQDDEIGMLVRSYNLNQQL--LQRHYEEQNENAMRFPVSDLPNKAL 255 G +L + R D G + + + + + + A ++DLPN+ + Sbjct: 288 RRDGSELPIDESRAPILDRQGQIAGTVTVLHDVSVTRAMELKMAHLAQHDFLTDLPNRRV 347 Query: 256 LMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM 311 L + L Q ++ + A++ + + + L + L ++ E+L + + Sbjct: 348 LDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASD 407 Query: 312 ILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL 371 +A+ G +F ++ V A + +++L+ ++ I R +L+ SIG++ D Sbjct: 408 TVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPNDA 467 Query: 372 T-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQ 430 AE L A A + A+ KG+N QFF E +R + ES + ALE +F + Q Sbjct: 468 DDAETLIKHADIAMYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQ 527 Query: 431 PQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW 490 P++ + +G + E L+R + P+ P I E CGLM +G WVL+E+CR + W Sbjct: 528 PKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEW 587 Query: 491 QERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVA 549 G+ +P++VN+SA++ + ++ L + P L LE+TE+ + + +A Sbjct: 588 MVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIA 647 Query: 550 ILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAA 606 +L L++AGV++A+DDFG GY+ L ++ LP+D LKID+ FV + ++++++A Sbjct: 648 VLHALKSAGVKLAIDDFGTGYSS---LSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSA 704 Query: 607 IIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 II + +SLNL +IAEGVET+ Q L QG+ F+RP+ + E Sbjct: 705 IIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELL 756 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 711 bits (1837), Expect = 0.0, Method: Composition-based stats. Identities = 150/630 (23%), Positives = 281/630 (44%), Gaps = 32/630 (5%) Query: 55 EPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLF 114 + L +++ + +L + L + L + +R + +R Sbjct: 178 DHLPDSVVAPMRRGIDRVLDRRETVESHHAIGAKLFDVHMHLVADSVGQRDRVAIFSRDV 237 Query: 115 ELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAI 174 Q + LE P++ V+ DS + + ++ +L Sbjct: 238 TQSHQRRQQLRKLETALEQAPVS--VMITDSHGAIE--YVNRAFVLVSGYSEDEVLGRNP 293 Query: 175 SWC--------INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVR 222 + R + H L + A N L + + DD G++ Sbjct: 294 RLLKSGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDD--GVVTH 351 Query: 223 SYNLNQQLLQRHYEEQN--ENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIIT 276 + + + QR EQ A ++ LPN+ LL + + + + LM + Sbjct: 352 FMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLD 411 Query: 277 CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAIT 336 + + L + LL + ++L+ L +A++ G +F V+ Q Sbjct: 412 LDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTELAE 471 Query: 337 LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQI 395 + +++ + E + + ++ SIG+A++ D L A +A + A+ KG+N Sbjct: 472 VAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGRNTF 531 Query: 396 QFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGS 455 F+D + A RL E + AL +F ++ QPQV++ +G+ E L+R P+ Sbjct: 532 CFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRWNSPERG 591 Query: 456 WDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMV 514 P I E L+ +G WVLEESCR +AAW+E G+ + ++VN+S Q ++ +V Sbjct: 592 QVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNHALV 651 Query: 515 ADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLR 574 + +L+ +Y + P L +E+TES + +P A+ L LR G++V++DDFG GY+ Sbjct: 652 ECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSS-- 709 Query: 575 QLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDW 631 L ++K LP+ +K+D+ FV + ++++++AI+ LA +L++ ++AEGVETE + Sbjct: 710 -LSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQH 768 Query: 632 LAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 L AG QGF +A+P+P + L + Sbjct: 769 LKDAGCIKVQGFRYAKPMPADQLAAWMLRQ 798 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 124/479 (25%), Positives = 228/479 (47%), Gaps = 15/479 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLP 251 N EL ++ + + G++ + + + +R ++ A ++ LP Sbjct: 857 NKKKNGELFWEAASISPI--KNAEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLP 914 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L ++ L+Q + +K+ A+M I + +D L ++LL + ++LK L Sbjct: 915 NRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCL 974 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F +I ++E H + ++L+ + + + + SIG+ ++ Sbjct: 975 RKSDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLY 1034 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D L A +A + + G+N +F+ E AQ RL E + AL+ ++F Sbjct: 1035 PDDGNDVSVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFY 1094 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP +++ ++ AE LLR P+ PD I E GL+ +G WV+ ++C+ Sbjct: 1095 LVYQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQE 1154 Query: 487 LAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 + WQ +G + ++VNLS Q ++ + +T I L LE+TE ++D Sbjct: 1155 VVNWQTQGSPIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPG 1214 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SM 603 + I+ L R+++DDFG GY+ L ++ P + LKID+ F+ +P + ++ Sbjct: 1215 SKGIIEQLHEMDFRLSIDDFGTGYS---ALSYLIKFPFNRLKIDRSFIADIPHNQEVLAL 1271 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 + II + L LQ+IAEGVET Q + L G AQG+ F+RPL E F + Sbjct: 1272 VKTIIAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRRYLQSHQ 1330 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 128/478 (26%), Positives = 227/478 (47%), Gaps = 16/478 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPN 252 EL L+L + + G + + + + + E + A ++ LPN Sbjct: 380 RKKHGELFWTSLSLSAIKSN--EGFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALPN 437 Query: 253 KALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + L + L + A+ I + + L + + LL + ++LKS + Sbjct: 438 RELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIR 497 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 +++ G +F ++ + A + Q++L + E + I+ L SIG+A++ Sbjct: 498 EEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVIIDDHDLCISASIGIALYP 557 Query: 369 GDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 GD T AE L A SA + ++ G++ F+ E A ++L EE + ALEN + + Sbjct: 558 GDGTTAEALLKNADSAMYISKESGRDNYHFYSSTVQEKAYEQLLEEMYLRRALENRELVL 617 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 + QPQV + +G+LV E LLR + P P I E G +V + WVL +C+ Sbjct: 618 YYQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQN 677 Query: 488 AAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 AWQ G+ +P++VN+S N++ + +L R+ P L LE+TE I + Sbjct: 678 MAWQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQT 737 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSM 603 + L L++ G+++ +DDFG G++ L ++ PI LKI F+ L P +S++ Sbjct: 738 TIYKLNKLKSLGIQITIDDFGTGFSS---LSYLSKFPIQKLKIGMTFIHNLHKDPTNSAI 794 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + A+I +A+SL L +IAEGVET+ Q ++L QG+L ++ + E + Sbjct: 795 VKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSKAVTSEEMGRFLAKN 852 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 710 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 146/482 (30%), Positives = 250/482 (51%), Gaps = 23/482 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N L + DD G ++ + QR ++ N A+ P+++LP Sbjct: 775 NRAKDGSLYWVDTTIAPFIGDD--GKPQSYISIRTDITQRKAAEDKSNYLALYDPLTNLP 832 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL++ L +A AL+ + + + L ++LL + E L + + Sbjct: 833 NRRLLLDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACV 892 Query: 308 SPRMILAQISGYDFAVIANGVQEPW-----HAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +A++ G +F VI G+ E A +G+++L E + + S+ Sbjct: 893 REGDTVARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSV 952 Query: 363 GVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+ +F +L +++L +A A + A+ G+N + FFDP+ E Q R+ E ++ AL+ Sbjct: 953 GITLFGKNNLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDMEHELRKALD 1012 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++F ++ Q QV ++ + V AE L+R P+ P+ + E CG+++++G WV++ Sbjct: 1013 KNEFQLFYQMQVGLSD-RAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVID 1071 Query: 482 ESCRLLAAWQ--ERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C L W+ ER L LSVN+SA Q + V + + R+ I P L LE+TES Sbjct: 1072 TACAQLKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTESA 1131 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP- 598 +D AVAI+ L++ G+R +LDDFG GY+ LQ+++ LP+ LKID+ FV + Sbjct: 1132 LLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSS---LQYLRLLPLYQLKIDRSFVRDIAS 1188 Query: 599 --GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 G+ +++ II +A +LNL +IAEGVET+ Q+ L +G QG+LF+ P+PI+ FE Sbjct: 1189 SIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPIDAFEA 1248 Query: 657 SY 658 Sbjct: 1249 LL 1250 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 710 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 136/500 (27%), Positives = 236/500 (47%), Gaps = 22/500 (4%) Query: 177 CINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ 232 + L R N + L + + D G + + + + Sbjct: 833 RFYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAV--KDAQGKVAHYVGVFSDITE 890 Query: 233 --RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 R +++ + A P++ LPN+ LL + L + + R A+ I + ++ Sbjct: 891 LRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNINDT 950 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIM- 345 L + +L + +L ++ + ++ G +F ++ V EP + +++L ++ Sbjct: 951 LGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQ 1010 Query: 346 SERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + + +E + SIG+++F D AE L A A + A+ +G+N +FF + Sbjct: 1011 ASPVTVE-HEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGRNTYEFFTKDLTQ 1069 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 + RL E+D+ A+E + ++LQPQ + +GK+V AE L+R +P LP I Sbjct: 1070 TSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRWLRPQQGLVLPGEFIK 1129 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTR 523 E GL+V +G WV + A W G+ LSVN+S ++ + L Sbjct: 1130 LAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLEL 1189 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 + L LE+TES + +V +L LR G+ + +DDFG GY+ L ++K LP Sbjct: 1190 SGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSS---LAYLKRLP 1246 Query: 584 IDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 ++ LK+D+ FV GLP D+ ++ A+I L SL L +IAEGVETEAQR++L G Sbjct: 1247 LNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEM 1306 Query: 641 QGFLFARPLPIEIFEESYLE 660 QG+L RP+P + + +L Sbjct: 1307 QGYLRGRPMPFDDYHARFLS 1326 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 710 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 150/476 (31%), Positives = 246/476 (51%), Gaps = 15/476 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLP 251 N + L++ L DE G + L + +R +E A ++DLP Sbjct: 577 NRRKDGTIYPEWLSISLL--RDEAGQVSHHVALFSDISERKEQEAHIRHMAEHDFLTDLP 634 Query: 252 NKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+AL+ + L Q + K A++ + + ++ L A + LL + ++L+ + Sbjct: 635 NRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTV 694 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 + + G +F +I + P A L Q++L + I+ L SIG+++F Sbjct: 695 RGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLF 754 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 + ++L A A + A+ +G+N+ QFF P+ +RLT E+ + ALE Q Sbjct: 755 PDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPELNAQVAERLTLENHLRQALERQQLY 814 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QPQ + + +LV E LLR Q P+ P I E GL+V +G WVL+E+CR Sbjct: 815 LVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQ 874 Query: 487 LAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 AAW G L ++VN+SA QL P+++A++ L R+R+ L LEVTES ++D Sbjct: 875 AAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQ 934 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSM 603 AV L+ + G+ +A+DDFG GY+ L ++K D++KID+ FV LP D+++ Sbjct: 935 AVRHLQAFKERGIHLAVDDFGTGYSS---LTYLKRFSPDLIKIDRAFVMNLPDNRDDAAI 991 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 ++AI+ LA++L +Q +AEGVE+E Q D+LA+AG + QG+L RP Sbjct: 992 VSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGELTAQLA 1047 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 147/482 (30%), Positives = 244/482 (50%), Gaps = 24/482 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 + E+ L + + D+ G + + + +R E E A ++ LP Sbjct: 550 DRRKNGEVYPKWLTISAVMSDN--GTVSHYVGTHHDITERKIAEERIKELAFFDALTRLP 607 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL++ L Q + AL+ I + + L + ++LL + +L + Sbjct: 608 NRTLLLDRLRQAITASARNEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSV 667 Query: 308 SPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +A++ G +F V+ + + +G+++L ++ + +I+ R SI Sbjct: 668 LESDTVARVGGDEFVVVLGNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASI 727 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G +F G + ++L +A A + ++ +G+N ++FFDP +R E+ + NA+E Sbjct: 728 GATVFRGHQASIDELLKQADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIE 787 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++QF + Q QV + + ++ AE L+R Q P P I E GL+V +G WVLE Sbjct: 788 DNQFLLHYQAQV-VGT-RVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLE 845 Query: 482 ESCRLLAAWQERG--IMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C LA W R L ++VN+S Q + V ++L ++ R +P L LE+TES Sbjct: 846 AACAQLARWAARPDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESV 905 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 +D+ + + L+ G+ ALDDFG+GY+ L ++K LP+D LKID+ FV + Sbjct: 906 LVDNVQDIIEKMSALKAKGIVFALDDFGIGYSS---LSYLKRLPLDQLKIDRSFVRDVLV 962 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D+ + I+ LA+SL L +IAEGVETEAQRD+LA AG QG+ F RPLPIE FE Sbjct: 963 DSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEA 1022 Query: 657 SY 658 Sbjct: 1023 LL 1024 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 134/483 (27%), Positives = 230/483 (47%), Gaps = 18/483 (3%) Query: 191 RELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVS 248 + + + ++ + R G + +R E A P++ Sbjct: 643 EFVGLRKTGQPIDVEILIGRGIS---EGQPA-LIGSLLDITERKEAEKTIEHLAFHDPLT 698 Query: 249 DLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLK 304 L N+ L M+ +EQ +A ALM + + + L + + L + ++L Sbjct: 699 GLANRLLFMDRIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLT 758 Query: 305 SVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGV 364 + L +++ G +F V+ +G + ++L ++ I ++ CSIG+ Sbjct: 759 TCLRETDTVSRFGGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGI 818 Query: 365 AMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENH 423 A + D A L A +A + A+ G+N QF+ A +R+ ES + E Sbjct: 819 ASYPKDGREAITLVKNADTALYRAKDLGRNNFQFYSSSMNARALERMAMESSLRRMFERQ 878 Query: 424 QFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEES 483 + + QPQV + SG++ E L+R + P G+ P + E GL+V +G WVL+ Sbjct: 879 ELRVHYQPQVGLQSGRITGLEGLVRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAG 938 Query: 484 CRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRID 542 C L W + G + L +N+SA QL + ++++L + P L LE+TE+ + Sbjct: 939 CYQLKTWLDAGFAPMRLGINVSAHQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMH 998 Query: 543 DPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---G 599 + + A LR LR G+ +++DDFG G++ L ++K LP D LKID+ FV+ LP Sbjct: 999 NMNEAFETLRRLRAVGITISIDDFGTGFSS---LSYLKDLPADHLKIDRAFVQNLPFGNN 1055 Query: 600 DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 ++++ II +A LNL++IAEGVE +AQ D+L +AG QGFL +RPL E E Sbjct: 1056 EANIARHIIEMAHGLNLKVIAEGVENQAQLDFLREAGCDEIQGFLVSRPLAAEDITEILT 1115 Query: 660 EEK 662 ++ Sbjct: 1116 NDE 1118 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 142/502 (28%), Positives = 246/502 (49%), Gaps = 27/502 (5%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 + L + R + + ++ + + + DE G + + QR Sbjct: 632 FYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAV--RDENGKTTEYVAIFSDITQR 689 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVV---ARKQTT-ALMIITCETLRDTAGVL 287 EE A ++ LPN+ LL++ L + AR + A++ + + + + Sbjct: 690 KLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDRFKTLNDTM 749 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPW-----HAITLGQQVL 342 ++LL+ + E++K + +A++ G +F ++ + H + +++ Sbjct: 750 GHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRAEETSKHIAAIAEKIR 809 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYG-DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 + +S ++ SIGV ++ G + + + L A A + A+ G+N ++FFDP Sbjct: 810 SALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRNAVRFFDPL 869 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 +A + R+T E+D+ +AL N Q ++ Q QV+ + + AE L+R P P Sbjct: 870 MQQAVEARVTLENDLRHALPNDQLQLYYQIQVD-NDRRAIGAEALVRWIHPIRGMVSPAH 928 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLE 519 I E L++ VG WVL+ +C LA W +R + L L+VN+S Q V + E Sbjct: 929 FIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQVGFVEHIAE 988 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 L+ Y I P L LE+TES ++D V + L++ GVR+++DDFG GY+ L ++ Sbjct: 989 LIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSS---LSYL 1045 Query: 580 KSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 K+LP+D LKID+ FV + D+ M+ II +AQ+ L +IAEGVETEAQ +L + G Sbjct: 1046 KNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFLKQNG 1105 Query: 637 VGIAQGFLFARPLPIEIFEESY 658 QG+ F +P PIE F+ Sbjct: 1106 CMCYQGYYFGKPAPIEQFQSQL 1127 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 151/651 (23%), Positives = 287/651 (44%), Gaps = 36/651 (5%) Query: 37 QNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQAL 96 + + + I + + L +I A I K + +V Sbjct: 266 AEKLESFQPIAEILTEINQSLIQSIADKTRVPAANITEQSKQISPLDAQLIVANMSTMPD 325 Query: 97 RKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTL 156 + S + + V+ + F L +++ V+ + + + + +M ++ Sbjct: 326 QSSHRNTKTISVISKQDFLLGEAVNVSVFIIPKT-------LWKVVVVTPQMVAINSASK 378 Query: 157 STLVTIYLLLSLILTVAISWCIN--RLILHPLRNIARELNAIPAKELVGHQLALPRLHQD 214 + + + LL+++++ A I R ++ P+ + +L P E L + Sbjct: 379 VSNLILMLLIAIMIIAAFLGFIYCRRSLIMPIYQMVNQLQR-PVTEGGQVYPELLDDRRQ 437 Query: 215 DEIGMLVRSY------------NLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEML 260 DE G+L + +L Q+ +R E A+ P++ LPN+ L + L Sbjct: 438 DEFGLLAYHFNQSKMALDSNNRDLKLQINERKQAEYQLKHLALHDPLTGLPNRLLFQDRL 497 Query: 261 EQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQI 316 EQ +A + A+ + + + + + LL + +L +A++ Sbjct: 498 EQAIALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSCTGRKTDTVARL 557 Query: 317 SGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQ 375 G +FA I V A+T Q++ +++ + I + SIG+ ++ D +E+ Sbjct: 558 GGDEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMGSSIGITIYPDDAANSEE 617 Query: 376 LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEM 435 L A A + A+ G+N ++FF + Q+ +D+ +L F ++ QP + Sbjct: 618 LLRNADIAMYQAKDDGRNTVRFFTSEMNARLQRNKEVLTDLAESLTKEHFELYYQPLFTI 677 Query: 436 TSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI 495 LV AE L+R P+ PD I E GL+ +G WVL ++CR + + GI Sbjct: 678 DQNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDWVLAQACREIKNFLNAGI 737 Query: 496 M-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPL 554 +++N+S +Q +++ ML +L ++ + + LE+TE +D+ A+ ++ L Sbjct: 738 TVFKVAINISPVQFRRKDLLQHMLMILAQHDVSAELIELEITEGAVMDNVDQAIETMQAL 797 Query: 555 RNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLA 611 +AG ++A+DDFG GY+ L ++K PI +KID+ F+ L D S+ AII ++ Sbjct: 798 HDAGFQLAMDDFGTGYSS---LSYLKRFPIQKVKIDRSFISDLENDDDSKSITTAIIQMS 854 Query: 612 QSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 SL L ++AEGVETE Q +L QG+ RP+P F +++ E K Sbjct: 855 HSLGLHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASEFIKNFSESK 905 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 132/439 (30%), Positives = 226/439 (51%), Gaps = 12/439 (2%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVL 287 + + E A ++ LPN+ LL + +EQV+ A++ I + + L Sbjct: 442 KEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSL 501 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 ++LL + ++LKS + +A+ G +F V+ N + E A + Q++L + Sbjct: 502 GHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFAL 561 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 I + +L SIG+A+F D AE L + A + A+ G+N QFF + ++A Sbjct: 562 PFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSA 621 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +R D+ ALE ++ ++ QP ++M S L E LLR + P+ PD I+ Sbjct: 622 YERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLA 681 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL++ +G WV+ C + AWQE+G + +++NLSA Q +++ ++ +L+ Sbjct: 682 EETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSETG 741 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 ++ + LE+TES ID+ V L L G+ +++DDFG GY+ L ++K PI Sbjct: 742 VKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSS---LSYLKQFPIH 798 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV L D +++AAII +A SL +++IAEG+E E Q D+L QG Sbjct: 799 TLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQG 858 Query: 643 FLFARPLPIEIFEESYLEE 661 + F++P+ + E + Sbjct: 859 YYFSKPVTVSEIELMLMNS 877 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 156/585 (26%), Positives = 271/585 (46%), Gaps = 26/585 (4%) Query: 87 VVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSF 146 V L N+ Q L K + ER + ++ ++FE + + S N P + D Sbjct: 139 VSLQNRVQFLYKMMVAERQL-MLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRG 197 Query: 147 RMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQL 206 + I +L S + + +L + N E+ + Sbjct: 198 SV---------LGQNISILQSGRHDRRFYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWV 248 Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVV 264 + + D G + L + E + +++LPN+ L + L Q + Sbjct: 249 NISAIRTGD--GQTESYVGVFTDLTRIKESEENLLYLSGHDALTELPNRLLFHDRLNQTL 306 Query: 265 A----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 A++I+ + + + + LL + +L+++ + LA++ G + Sbjct: 307 VESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKATLARLGGDE 366 Query: 321 FAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSR 379 F ++ + + A L Q+VLT +++ + I ++ SIG+ ++ D L Sbjct: 367 FGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRN 426 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A SA + A+ G+N QF+ + A+ R+ ES + NA++ +F ++ QPQ+E+ +GK Sbjct: 427 AESAMYHAKQSGRNNFQFYRSELNTASLARILLESGLRNAVDRQEFLLFYQPQMELATGK 486 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER-GIMLP 498 L+ E L+R Q P+ P I E GL++ +G W L+E+CR W ++ G+ L Sbjct: 487 LIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLR 546 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 +SVNLS +Q P+ ++ + + P L LE+TES + D + L L G Sbjct: 547 ISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFG 606 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 V +A+DDFG G++ L ++K PID LKID+ FV P D+++I A I LA SLN Sbjct: 607 VLLAIDDFGTGFSS---LSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLN 663 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 L++IAEGVE Q ++LA+ QG+ + RPL + FE L+ Sbjct: 664 LEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEMFMLD 708 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 709 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 124/472 (26%), Positives = 231/472 (48%), Gaps = 15/472 (3%) Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNK 253 + + + + + E +V + + QR EE +A ++DLPN+ Sbjct: 460 RKDQSSFPVEYVISSIKEGTE---IVGEVITFKDVTQRKQMEEEIKYHAYFDSLTDLPNR 516 Query: 254 ALLMEMLEQ----VVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSP 309 LL + L Q + A++ + + + L + ++LL + +L + + Sbjct: 517 VLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPK 576 Query: 310 RMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG 369 +++ G +F + ++ + + +V+ S + ++ SIG+++F Sbjct: 577 SATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPD 636 Query: 370 DLTAEQ-LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIW 428 + + L A +A + ++ + FF + + E+D+ ALE + I+ Sbjct: 637 NGDTTEILVKNADTAMYKSKEISGSSYHFFSEGMDTRTFESIKLENDLYKALEQEELVIY 696 Query: 429 LQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLA 488 QPQ+ + K+ E L+R + PD I E GL+V +G WVL+E+CR L Sbjct: 697 YQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQLK 756 Query: 489 AWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 W ++G L +SVNLSA QL ++ A + +L + P + LE+TE+ + + + Sbjct: 757 KWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTEST 816 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP-GDSSMIAA 606 + ++ L+ G+ +A+DDFG GY+ L ++K LPI LKIDK FV+ + D+++ Sbjct: 817 LKTMKKLKGLGINLAIDDFGTGYSS---LGYLKKLPISTLKIDKSFVQDMTKDDAAITNT 873 Query: 607 IIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 II LA++LNL +IAEGVET+ Q ++L+ + QG+ F+RP+ E E+ + Sbjct: 874 IITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 128/472 (27%), Positives = 256/472 (54%), Gaps = 16/472 (3%) Query: 200 ELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLM 257 +++ + + + DE G + + + + + R E + A ++DLPN+ + + Sbjct: 241 DVIWTESKINPIM--DEEGNVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYV 298 Query: 258 EMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL 313 + L + + + + A++ + + +D ++LL+ ++L++ L P ++ Sbjct: 299 QQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVV 358 Query: 314 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT- 372 A++ G +F ++ N + + A L +Q++ + ++ CSIG+A++ D Sbjct: 359 ARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDN 418 Query: 373 AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQ 432 E L RA +A +T + +GKN FFDP + +R+ E+++ A+E QF I+ QP+ Sbjct: 419 PEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPK 478 Query: 433 VEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE 492 +++ + + E L+R P+ P+ I E G+++ +G W+L+++C+ W + Sbjct: 479 IDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHD 538 Query: 493 RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILR 552 +G L +SVNLSA Q+ ++V + ++L ++ P L LE+TES + A A+L+ Sbjct: 539 QGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQ 597 Query: 553 PLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIM 609 +R+ G+++++DDFG GY+ ++KSLP+D +KID F+ + + +++ AI+ Sbjct: 598 QIRDIGIQISIDDFGTGYSSF---SYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVT 654 Query: 610 LAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +AQSLN+ +IAEG+E Q L + G QG+LF++PLP + F++ +E Sbjct: 655 IAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLLRQE 706 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 138/484 (28%), Positives = 242/484 (50%), Gaps = 23/484 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLP 251 + E+ + + + D G L+ + + +R E ++ A P+++LP Sbjct: 249 DRRKNGEVYPSWMNINPV--RDISGNLLYYVGIFSDVTKRKEAEAQIHQLAFYDPLTELP 306 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL E L+Q A++ + + + + LL+ + ++L S + Sbjct: 307 NRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQLLIEVAKRLNSCV 366 Query: 308 SPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +A++ G +F V+ + A + +++ +S+ + R SI Sbjct: 367 RNGDTVARLGGDEFVVVLESLSSVPDEAATQADLVAEKIRYALSQPYQLANHVHRTTPSI 426 Query: 363 GVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GV MF G + E++ A +A + A+ G+N I+F+DP + + R E ++ +E Sbjct: 427 GVVMFRGHQQSLEEVLKFADTAMYQAKTAGRNAIRFYDPVMQASIEARAELEEELRQVVE 486 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +Q ++ Q Q++ +S + + AEVLLR Q P+ P I E G +V +G WVL+ Sbjct: 487 RNQLRLYYQVQMD-SSNRPLGAEVLLRWQHPERGLVSPAQFIPMAEETGHIVPIGLWVLQ 545 Query: 482 ESCRLLAAWQERGI--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C L WQ + L L+VN+SA Q + V+ + L + +P L LE+TES Sbjct: 546 TACTQLKVWQSDPLTCDLTLAVNVSAKQFRSMDFVSQVQRTLAQSGAKPSLLKLELTESL 605 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP- 598 +++ +A +R L+ GV ++DDFG GY+ LQ++K LP+D +KID+ FV + Sbjct: 606 VLENVEDTIAKMRELKLLGVSFSMDDFGTGYSS---LQYLKRLPLDQIKIDQSFVRDIAS 662 Query: 599 --GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D++++ II +++ L L +IAEGVETEAQR++L G QG+LF RP P+ FE Sbjct: 663 DSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQREFLDLRGCHAFQGYLFGRPAPLAEFEA 722 Query: 657 SYLE 660 + Sbjct: 723 ILRK 726 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 129/433 (29%), Positives = 217/433 (50%), Gaps = 12/433 (2%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 +R+ E+ A P++ LPN+ LL + + Q +A Q A++ + + + L Sbjct: 200 KRYEEQLAYQATHDPLTALPNRNLLADRISQALAWAQRHRRWIAVLFVDLDFFKFVNDSL 259 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + + LL + E+L + LA G F V+ ++ A + +S Sbjct: 260 GHGKGDQLLKMVAERLSERVRQVDTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAISL 319 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 ++ +L CSIG+ ++ D A+ L A A + A+ +G+N +++ + E Sbjct: 320 PFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNERV 379 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 R++ E + ALEN +F +W QPQ ++ +G+L E L+R + + P I Sbjct: 380 ASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLA 439 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+V +G WV+ +C WQ+ G+ L ++VNLS Q + + +L Sbjct: 440 EETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVLRETG 499 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + P L LE+ ES + D +A A+L L+ GV++++DDFG GY+ L ++K P Sbjct: 500 LDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSS---LSYLKRFPFA 556 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID FV + PG +++ +II +A +LNL ++AEGVETE Q ++L G QG Sbjct: 557 KLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQG 616 Query: 643 FLFARPLPIEIFE 655 + +RPLP FE Sbjct: 617 YYLSRPLPAAEFE 629 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 140/468 (29%), Positives = 239/468 (51%), Gaps = 14/468 (2%) Query: 204 HQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLE 261 H + + D G +R L + +R E N A ++DLPN+ LL L+ Sbjct: 1043 HWVQAIGNAEYDSQGHPIRLRGLIMDVTERKTSQERLNYMAHHDHLTDLPNRLLLKARLD 1102 Query: 262 QVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQIS 317 Q + + A++ I + + + A + LL L ++L+ VL +A+IS Sbjct: 1103 QSIQQATRKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQRLRQVLRSSDTVARIS 1162 Query: 318 GYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQL 376 G +F + +++ HA + +++T+ E P+E + S+G+++F D L Sbjct: 1163 GDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSLFPDDGMDTAIL 1222 Query: 377 YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMT 436 A SA + A+ +G+N F+ + AA + + E+ + AL+ ++F + QPQ++++ Sbjct: 1223 LRNADSAMYRAKEEGRNTYCFYAEEMTSAAFEYVLFENALRGALKRNEFYLVYQPQIDLS 1282 Query: 437 SGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM 496 S + V EVLLR P+ P I E GL+ +G WVL +C W ++GI Sbjct: 1283 SHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYRACCQAKTWLDQGID 1342 Query: 497 L-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 ++VN++A Q+ N V + + L + L LE+TE + + L L+ Sbjct: 1343 FGHIAVNVAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTEDRIKQLEVLQ 1402 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQ 612 + G+ +A+DDFG GY+ L ++K LPI+ LKIDK FV +P D ++ A+I L + Sbjct: 1403 DMGIYLAIDDFGTGYSS---LSYLKRLPINKLKIDKSFVRDIPHDTNDMAISEAVIALGK 1459 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +LNL++IAEGVE E Q +L + G AQG+L+++PLP E + + E Sbjct: 1460 ALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEEITQLFAE 1507 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 134/490 (27%), Positives = 228/490 (46%), Gaps = 26/490 (5%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDLP 251 + I + V ++ + G R + +R E A ++ LP Sbjct: 171 HRIVLDDGVERIVSQHAELLSADDGRTSRLVGTVHDITERTLAEERIRYLAHHDTLTALP 230 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ E +EQ +A Q A++ + + + L + LL +L L Sbjct: 231 NRFQFEERMEQALAFAQRNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAGRLMKCL 290 Query: 308 SPRMIL------------AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQ 355 L +++ G +F ++ + P A + Q+++T +S+R I + Sbjct: 291 RRSDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGGHE 350 Query: 356 LRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 + SIG+++F D +QL A +A + A+ G+N Q++ A +RLT E+ Sbjct: 351 VFVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRNTYQYYSGSMNAMALERLTLEN 410 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 ++ AL+ ++F + QPQ++ SG++V E LL +P PD I E GL+ + Sbjct: 411 NLRWALKRNEFRLCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGLIAS 470 Query: 475 VGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 +G WVL +C W G+ + ++VNLS+LQ + + ++L + P L L Sbjct: 471 IGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSHLEL 530 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TE + + A ++R L+ GVR ++DDFG GY+ L + P+D LKID+ F Sbjct: 531 EITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSS---LSRLSRFPLDALKIDRSF 587 Query: 594 VEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 V + D + + AAII +A++L L +IAEGVET Q +L G QGFLF++PL Sbjct: 588 VRDISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLN 647 Query: 651 IEIFEESYLE 660 + Sbjct: 648 PDAAAAFLRA 657 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 707 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 127/467 (27%), Positives = 228/467 (48%), Gaps = 26/467 (5%) Query: 215 DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 DE G V Q + +R E+ A ++ LPN+ ++ LEQ + Sbjct: 237 DEQGEAVCLTGTIQDITERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDR 296 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQ------------I 316 A++ + + + L + LL + ++L + LA+ + Sbjct: 297 MLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRL 356 Query: 317 SGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQ 375 G +F ++ + ++ + +++L +S +E ++ SIG++++ D T A Sbjct: 357 GGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASD 416 Query: 376 LYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEM 435 L A A + A+ +G+N Q +D A +R+ ES + AL+ +F ++ QPQV Sbjct: 417 LIRNADGAMYQAKEQGRNGYQIYDESMNAKALERIILESQLHKALKEEEFIVYYQPQVSN 476 Query: 436 TSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI 495 SG++V E L+R + P + E GL++ + WV+ E+CR W + G Sbjct: 477 QSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGF 536 Query: 496 -MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPL 554 + L++N+S Q M ++ + +L + PG L LE+TE + V L+ L Sbjct: 537 PPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQAL 596 Query: 555 RNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLA 611 + GVR+A+DDFG G++ L ++K P+DVLKID+ F+ + P D+++ A I +A Sbjct: 597 KGMGVRLAIDDFGTGFSS---LSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMA 653 Query: 612 QSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 ++ L++IAEGVET+ Q D+L K G + QG+LF++P+P + Sbjct: 654 HTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTELPRLF 700 >UniRef50_Q2SDG6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDG6_HAHCH Length = 686 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 170/674 (25%), Positives = 294/674 (43%), Gaps = 21/674 (3%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 ++ SL+ K M V L + + + + VR+P + A Sbjct: 10 VKWRHSLSAKLMNWVLFTALAVGVLLSIGQIIFESMRAVEEMDNEARQTLAIVRDPATQA 69 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQF-QALRKSFIPERPVPVMVTRLFELPVQ 119 + D A+ +L + + A + PNQ A + E M +F + Sbjct: 70 VYSIDPDLAQQVLEGLFEKPSIRYAAISHPNQTTLAELSKPLLETQSRWMTDAIFGKERE 129 Query: 120 ISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCIN 179 ++ ++ P L + D+ + LL +L+L + + Sbjct: 130 YAISLFRP--TPQPTYYGELKIVVDTAPKSALFFERSILIFMTGLLRALLLAFVLHLVYH 187 Query: 180 RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRS-------YNLNQQLLQ 232 L+ PL+ I L I E L +PR H+ DE+G VR+ +QQ Q Sbjct: 188 FLLTAPLKAIINSLLRINPAEPGLQSLPVPRQHEKDELGSWVRAANSLLQSIEEHQQKRQ 247 Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLK 288 + + ++ LP ++L + V A Q A+ + + + L Sbjct: 248 AAEARIIKLSQYDSLTGLPTRSLFTNYIAAAVDDSEALNQKFAVFCVGIDDFKSINEQLG 307 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 +Q + LL E+L S + ++ G FA+I V + + +L +S Sbjct: 308 YSQGDKLLQAFAERLLSQRDGVHTVCRLGGDQFALILFNVSSSYRVAAFAESLLREISRP 367 Query: 349 LPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 IE C+IG+A++ D AE++ +A A+ N QF+ + Sbjct: 368 FEIEEQLTPVSCTIGIAIYPDDARDAEKILQKAEQTMMLAKSVANNHFQFYVASLDSEIR 427 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +R E D+ A++N + + QPQ+++ S ++V E LLR + P+ PD I E Sbjct: 428 ERKKLEKDLSKAIQNDELFLVYQPQIDLNSKQVVGCEALLRWRHPERGLVPPDVFIPIAE 487 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 ++ +G WVL E+C + W+ +G + +++NLSA QL +L+++ +I Sbjct: 488 ANETILEIGDWVLHEACAQVNQWRNQGFNIKVAINLSANQLRQKEFAPHVLKIIESRQIP 547 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 + LEVTE+ +++ + A+ LR L G++ A+DDFG GY+ L ++K LPI + Sbjct: 548 TSLIELEVTETSFMENLNQAITSLRHLSEFGIQCAVDDFGTGYSS---LSYLKQLPIRKI 604 Query: 588 KIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFL 644 KIDK FV L D+ ++ AII L +SL L +IAEGVET Q +L G +AQG+ Sbjct: 605 KIDKQFVRDLMKDEDDTQIVHAIIQLGKSLRLDVIAEGVETPRQERFLKHDGCTLAQGYY 664 Query: 645 FARPLPIEIFEESY 658 +++P+P + E Sbjct: 665 YSKPVPPDELIEFM 678 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 138/505 (27%), Positives = 239/505 (47%), Gaps = 27/505 (5%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 + ++ + + E+ L + + + G++ L +R Sbjct: 420 FYHEMWRQIKQTGKWQGEIWDKRKNGEIYPKLLNIYAVKSKN--GVVTHYVGSYTDLTER 477 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E+ A ++ LPN+ LL++ L +A AL+ I + + L Sbjct: 478 KMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGALLFIDLDKFKTLNDTL 537 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVL 342 ++LL + +LK+ + +A+I G +F V+ + + +G+++L Sbjct: 538 GHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIESVEAAAQTEVIGEKIL 597 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQ 401 + + + SIG+++F + + ++ +A A + A+ G+N+++FFD + Sbjct: 598 AALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMYQAKKSGRNKLRFFDQR 657 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 + R E+++ AL N Q + Q QV+ + + AEVLLR P P Sbjct: 658 MQDTISSRANLEAELRKALANEQLQLHYQIQVDSA-HQTIGAEVLLRWIHPVNGIISPAQ 716 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLE 519 + E GL++ +G WVLE +C L WQ+ L L++N+SA Q ++ Sbjct: 717 FVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFHQNGFATEVRS 776 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 ++ R+ I P L LE+TE +++ +A +R L+ GV+ +LDDFG GY+ LQ++ Sbjct: 777 VIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSS---LQYL 833 Query: 580 KSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 K LP+ LKID+ FV L D +++ II +A SLNL +IAEGVETE QR L K Sbjct: 834 KRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQRQILLKNQ 893 Query: 637 VGIAQGFLFARPLPIEIFEESYLEE 661 QG+LF +P+PIE FE + Sbjct: 894 CSHFQGYLFGKPMPIEQFESLLSSD 918 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 138/476 (28%), Positives = 243/476 (51%), Gaps = 16/476 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPN 252 L ++++ D L+ + + +R + A P+++LPN Sbjct: 488 RRLDGSLFWVEVSMRLARFSDGQNRLLVVV---RDITERKNAQDRLEFMAHHDPLTELPN 544 Query: 253 KALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + LL + +++ +A + ALM + + + L A + LL + +L+ + Sbjct: 545 RLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQCVR 604 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 +A++ G +F ++ N V++ + + +++ ++ + IE ++ S+G+AMF Sbjct: 605 ESDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAMFP 664 Query: 369 GDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 D + L +A +A + A+ G++ +FF + A L S + ALE +F + Sbjct: 665 EDGHDFDTLMKKADAAMYHAKESGRSTYRFFAARMNADAVAHLALRSGLHRALERGEFQL 724 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 + QPQV +T G +V AE L+R P+ P I E GL+V +G WVL ++CR Sbjct: 725 YFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQACRQA 784 Query: 488 AAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 A WQ G L ++VNLSALQ ++ + E L + P +L LE+TES I D A Sbjct: 785 ALWQAGGHALTMAVNLSALQFRRGDLERAVREALEESGLAPHSLELELTESIMIQDHEAV 844 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMI 604 + + R L GV++++DDFG GY+ + ++K +D LKID+ FV + ++++ Sbjct: 845 MDMTRRLGALGVQLSIDDFGTGYSSM---AYLKRFAVDKLKIDQSFVRDVHTDTDNAAIT 901 Query: 605 AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 AII +A SL L++IAEGVE ++L G +AQGFL+ RP+ + FE++ L+ Sbjct: 902 QAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQGFLYGRPMTAQRFEKTVLD 957 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 146/477 (30%), Positives = 241/477 (50%), Gaps = 16/477 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDL 250 N L +QL + + + G++ + + + R+ E+ A ++ L Sbjct: 573 RNYRKDGALFWNQLFIAPVP--NAEGVITHHIGVINDVTELIRYQEQLEYQANYDGLTRL 630 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ LL + LE + Q A++ + + ++ L + + LL + E+L Sbjct: 631 PNRNLLRDRLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARC 690 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 +A+ G +F ++ + IT ++V ++E + ++ +L CS+G ++ Sbjct: 691 SRTSDTVARHGGDEFVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASL 750 Query: 367 FYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D AE L +A A + A+ G+N QF+ P+ +A RL E + AL +++F Sbjct: 751 FPQDGDDAETLMKKADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEF 810 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QPQV++ SG++V E L+R P+ P I E GL+ + WVL E+CR Sbjct: 811 LLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACR 870 Query: 486 LLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 AWQ++G+ +SVNLSA N+ ++++L ++P L LE+TES + + Sbjct: 871 QNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNA 930 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 AV +L L G+ +A+DDFG GY+ L ++K P+D LKID+ FV + D Sbjct: 931 EEAVLMLNELHALGIGLAIDDFGTGYSS---LSYLKRFPVDRLKIDRSFVSDIGVSGDDE 987 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 ++ +AII LA SL LQ+IAEGVET AQ D+L + QGF FA+PL E E Sbjct: 988 TITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELL 1044 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 161/648 (24%), Positives = 285/648 (43%), Gaps = 42/648 (6%) Query: 28 TVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAE-AILASIKPAG---VVS 83 TVL Q+ R +L + S+ +++ D + I + + + Sbjct: 451 TVLAHEERQRLRQQITQRLSENISIMH--FSARLVRKDGQLLDVEIHSRLFEYRGRSAII 508 Query: 84 RADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQA 143 V + ++ QA + + + + + LV+ Sbjct: 509 GVVVDISDRVQADANQKLASKVFENAAEGILITGADYRIIAVNQAFTRITGYPPELVI-- 566 Query: 144 DSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVG 203 R+ + S V + + L+ + E Sbjct: 567 --GRVSRIFRDNTSWSVAML----------------DGLARHGHWQGEMLDRRRSHEWYP 608 Query: 204 HQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALL----M 257 +L++ + D+ G + + + R E A P++ LPN++ L Sbjct: 609 AELSISAV--RDDAGAITNYVGVFADITVRKQAEERLQFLANHDPLTRLPNRSWLIACLE 666 Query: 258 EMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQIS 317 + ++Q+ + Q A+M + + + + LL +L+ V+ R +A++ Sbjct: 667 DRIQQIASSGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLG 726 Query: 318 GYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQL 376 G +F ++ + TL + +L ++++ L +E +L S+G++++ D A L Sbjct: 727 GDEFTLLVSHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTL 786 Query: 377 YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMT 436 A A + A+ GKN QFF + A +RL E + ALE +F + QP V Sbjct: 787 LKNADVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAA 846 Query: 437 SGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM 496 + +L + EVLLR + P+ P I E GL+ +G WV+ ++CR LA W G+ Sbjct: 847 TYRLEALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLH 906 Query: 497 L-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 + L++NLSA Q ++ + L I G L LE+TES + +P AV++L L+ Sbjct: 907 VPRLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELK 966 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQ 612 GVR+++DDFG GY+ L ++K P+D LKID+ F+EGLPGD +++ AI+ +A+ Sbjct: 967 ALGVRLSIDDFGTGYSS---LSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMAR 1023 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 L+ ++AEGVETEAQ +L G + QG+LF+RPLP + Sbjct: 1024 KLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQ 1071 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 137/501 (27%), Positives = 244/501 (48%), Gaps = 21/501 (4%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ- 232 + L+ N EL L L + +E+G + + + + Sbjct: 457 FYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAV--RNEVGHVTHYVGVFTDISKL 514 Query: 233 -RHYEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVL 287 + + + A P++DLPN+ L++ LE + R A+M + + + L Sbjct: 515 KQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFLDLDRFKTVNDSL 574 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 A + LL + +L+ L L ++ G +F V+ V+ P A + + ++ +++ Sbjct: 575 GHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPADAAVVAKNLVEVLAA 634 Query: 348 RLPI-ERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + ++ SIG++ + D L A +A + A+ +G+N F+ + + Sbjct: 635 PFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQGRNTYGFYTEDLIRS 694 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 A +RL E+ + ALE+ +F ++ QP + + G+L+ AE L+R + P I Sbjct: 695 ATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALVRWKPQGEPMVSPAAFIPV 754 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRY 524 E GL+V +G WVL ++CR + W + G ++VNLSA Q ++ A + +L Sbjct: 755 AEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSAEQFRRQDVSAMLATVLAET 814 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + L LE+TES ++ AV +L L+ GV +A+DDFG GY+ L ++K I Sbjct: 815 GLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDFGTGYSS---LAYLKRFSI 871 Query: 585 DVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 D LKID+ FV+ + DS ++ +AI+ +A++L++ + AEGVE EAQ + L G G Q Sbjct: 872 DKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGEAQLELLRGLGCGSYQ 931 Query: 642 GFLFARPLPIEIFEESYLEEK 662 G+L + PLP + FE +L + Sbjct: 932 GYLCSPPLPADEFEARFLRLR 952 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 705 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 137/457 (29%), Positives = 233/457 (50%), Gaps = 14/457 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEEQNEN--AMRFPVSDLPNKALLMEMLEQVVAR----KQ 268 D G + + + +RH EQ A ++ LPN+ALL + +E+ + +Q Sbjct: 122 DTSGKPLYLIGMFVDITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQ 181 Query: 269 TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV 328 AL+ I + + L + LL + + S++ +A+ G +F V+ + + Sbjct: 182 RVALLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNL 241 Query: 329 QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTA 387 + + A + Q++L + I+ +L SIG+++F D L + A + A Sbjct: 242 ESAFDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHA 301 Query: 388 RHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLL 447 + G+N +FF P+ A++R + E + NAL+ + + QP V + GK EVLL Sbjct: 302 KKNGRNNCEFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLL 361 Query: 448 RIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSAL 506 R Q P P I E G+++ +G W++ +SC + AWQE+G + L++NLSA+ Sbjct: 362 RWQHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAI 421 Query: 507 QLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF 566 Q ++ +++ +L + L LE+TES I+D + LR L G+ +++DDF Sbjct: 422 QFRQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDF 481 Query: 567 GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGV 623 G GY+ L +K I+ LKID+ FV + P D+++I AI+++A +L LQ+IAEGV Sbjct: 482 GTGYS---NLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGV 538 Query: 624 ETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 E E Q +LA G QGF F++PLP E+ + Sbjct: 539 ENEQQLAYLALHGCTRFQGFYFSKPLPAIEIEKKMVN 575 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 705 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 131/478 (27%), Positives = 241/478 (50%), Gaps = 16/478 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLP 251 + + E+ L + + DE G++ L + Q+ E+ + A P+++LP Sbjct: 790 DRRKSGEIFPKWLTIDAI--RDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELP 847 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+AL + LEQ + L I + + L + + LL+ + ++K L Sbjct: 848 NRALFRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHL 907 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F VI G+++ + ++ + E ++ ++ SIG+AM Sbjct: 908 RTSDTVARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMH 967 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D E L A +A + A+ +G+ +FF E +RL+ E + A+E +Q Sbjct: 968 PDDGEDYETLTKHADTAMYRAKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLT 1027 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP+V++ ++ E L+R P+ P I E GL++T+G WV++++C Sbjct: 1028 LHYQPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMD 1087 Query: 487 LAAW-QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 + L +++NLSA Q +VA + L + + P L +E+TES + D + Sbjct: 1088 AKRLARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVN 1147 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSS 602 + + LR GV+V++DDFG GY+ L ++K LP++ LKIDK F++ L D++ Sbjct: 1148 RTIEQIGELRALGVKVSIDDFGTGYSS---LSYLKKLPLNALKIDKSFIQDLYLDSDDTA 1204 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++++I+ +A +L L ++AEGVE +AQ +L + QG+ F++PLP E FE+ L+ Sbjct: 1205 IVSSILSMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEKFLLD 1262 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 705 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 134/505 (26%), Positives = 234/505 (46%), Gaps = 16/505 (3%) Query: 166 LSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYN 225 L LIL ++ I ++ L + ++ G L + L IG L S Sbjct: 79 LDLILPEQHAFVIEQMQLRAAGVLGHNYELTGLRK-DGSTLPIMVLGSPSVIGGLPASVG 137 Query: 226 LNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCET 279 + + + E A ++ LPN+ LL E EQ++A + A++ + + Sbjct: 138 TVLDISAQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDH 197 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 + L + + LL + +L SV+ LA++ G +F G A+ + + Sbjct: 198 FKRVNDSLGHSVGDELLCEVARRLDSVVRRIDTLARLGGDEFIFAMPGF-HTAAAVEVAR 256 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFF 398 +++ + S + +L S+G++++ D E L A +A + A+ G+N QF+ Sbjct: 257 RLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRNAFQFY 316 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 + RL ES++ AL ++F + QP V + +G ++ E L+R P+ + Sbjct: 317 SSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIM 376 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADM 517 PD I E GL+ +G WVL E+CR AW + G+ + ++VN++ +Q V + Sbjct: 377 PDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMV 436 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 L + L LE+TE + D + L L GV ++LDDFG GY+ L Sbjct: 437 AGALATSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSS---LA 493 Query: 578 HMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K P+ LKID+ FV L P D ++ + I+ + +SL + ++AEGVE Q L K Sbjct: 494 YLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRK 553 Query: 635 AGVGIAQGFLFARPLPIEIFEESYL 659 G +AQG+ F+RP+ + + Sbjct: 554 MGCDMAQGYYFSRPMSADGMADMLR 578 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 128/473 (27%), Positives = 240/473 (50%), Gaps = 16/473 (3%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKA 254 ++ + + + + D G ++ + + + + QR E A ++ LPN+ Sbjct: 234 KGRKPIDVSVTISAM--KDRAGNIIGASKIVRDITQRKESQERIEYLAHYDSLTGLPNRT 291 Query: 255 LLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 LL + L + + AL+ + + + L + LL + ++++S + Sbjct: 292 LLSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQA 351 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 ++++ G +F V+ + ++ A ++++T +S+ IE +L SIG++++ + Sbjct: 352 DTVSRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDN 411 Query: 371 L-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 A L A +A ++A+ +G+N+ QF+ AA +RL E D+ AL + Sbjct: 412 GKDASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLY 471 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QPQ+E+ +G+++ E L+R + P I E GL++ +G ++L ++C Sbjct: 472 QPQIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQ 531 Query: 490 WQE-RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAV 548 W E +G ++VN+SA+Q + +L +L+ P L LEVTES + + V Sbjct: 532 WHEHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVV 591 Query: 549 AILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SMIA 605 + L + G+++A+DDFG GY+ L +++ ID LKID+ FV LPGD+ ++I Sbjct: 592 QKMGILESHGIKLAIDDFGTGYSS---LSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIR 648 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 AI+ + +SL L+++AEGVETEAQ +L +QG+L+ARP+ FE Sbjct: 649 AIVAMGRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFEAWL 701 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 134/482 (27%), Positives = 245/482 (50%), Gaps = 17/482 (3%) Query: 191 RELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVS 248 +N E+ L++ + D G + + + + +R E + P++ Sbjct: 854 EVINQRKNGEIYTQWLSISTI--KDADGKISQHIGIISDISERKVAEERIQFLSNFDPLT 911 Query: 249 DLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLK 304 +LPNK LL + + +A + LM + + + L + + ++ L E+ Sbjct: 912 NLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERFV 971 Query: 305 SVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGV 364 + + P + + G +F ++ + A + +++L I+++ ++ SIG+ Sbjct: 972 AYMRPEDTVCRQGGDEFILLLPN-TDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGI 1030 Query: 365 AMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENH 423 + + D + EQL A +A + A+++G+N QFF Q E A L ES++ +A+E+ Sbjct: 1031 SAYPQDGESFEQLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHE 1090 Query: 424 QFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEES 483 +F ++ QPQ + + K++ E L+R Q P+ P I E GL+ +G WVL + Sbjct: 1091 EFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTA 1150 Query: 484 CRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRID 542 + LA+WQE G+ +P++VNLS +Q + + ++L ++ P L LE+TE ++ Sbjct: 1151 VKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAME 1210 Query: 543 DPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PG 599 D + +L L + GVR+++DDFG GY+ L ++K ID LKID+ FV G+ P Sbjct: 1211 DSERTLNVLNQLNSLGVRLSIDDFGTGYSS---LSYLKKFKIDKLKIDQSFVRGIGSHPQ 1267 Query: 600 DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 D+++I AII +A+SL+ + IAEGVET Q ++L QG+ F++PLP + Sbjct: 1268 DAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTKLLA 1327 Query: 660 EE 661 + Sbjct: 1328 NQ 1329 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 704 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 139/506 (27%), Positives = 233/506 (46%), Gaps = 27/506 (5%) Query: 178 INRLILHPLRNIARE----LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL-- 231 R I LR +N E+ L + + D G + + Sbjct: 468 FYRNIYTSLRETGSWSGEIINRRKNGEIYPEHLTITAV--KDADGQTTNYVGMFTDISVA 525 Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 + E A P+++LPN+ L + L Q + AL+ + + + L Sbjct: 526 KAASERIENLAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTL 585 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN-----GVQEPWHAITLGQQVL 342 ++LL + +L + + +A++ G +F ++ V+ +G ++L Sbjct: 586 GHDYGDMLLKQVALRLSNCVREGDSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKIL 645 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +++ ++ + SIG+++F G +E L A A + A+ G+N ++FFDP Sbjct: 646 MSLNQPYQLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMYQAKKAGRNTLRFFDPL 705 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 E R+ E ++ A+E QF ++ Q Q+ G+ AE L+R + P+ P Sbjct: 706 MQETINMRVDLERELKKAIEQKQFELYYQVQMNSA-GQPSGAEALIRWRHPERGIISPIQ 764 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAWQ--ERGIMLPLSVNLSALQLMHPNMVADMLE 519 I E GL+ +G WVL ++C L AWQ + L++N+SA Q + P+ + Sbjct: 765 FIPVAEETGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSAKQFLQPDFANQVKN 824 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHM 579 + + I L LE+TES ID+ + + L G++ +LDDFG GY+ LQ++ Sbjct: 825 SIRSFHIDNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGYSS---LQYL 881 Query: 580 KSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 K LP+ LKID+ FV L D+S ++ II +A SL L +IAEGVET+ Q L G Sbjct: 882 KMLPLSQLKIDQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQLLNAHG 941 Query: 637 VGIAQGFLFARPLPIEIFEESYLEEK 662 G QG+ F+ PL I F Y++ K Sbjct: 942 CGNYQGYYFSEPLSINEFNHQYMQFK 967 Score = 84.6 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 98/250 (39%), Gaps = 20/250 (8%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 ++ +S+ + +V VL + + + + + ++LE++A+ S+ Sbjct: 15 LQPKKSIRGEIRHLVLITVLTSLSLTFIFGAIYKINNEKQAVHSELETLAKITALNSQSS 74 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPN---------QFQALRKSF---IPERPVPV 108 ++ D A+ IL S+ V A V+ + + Q L + + + Sbjct: 75 LVFNDARAAQEILQSLSARADVLDAQVLRVDGTVLAKKKFEKQTLSNDYLFVPNDALLSQ 134 Query: 109 MVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSL 168 + L P +L+ P+ + ++ D+ + ++ TL + I ++ L Sbjct: 135 LGNFLGISPSTYVTEHVTLKNT----PLGNISIRFDTSIVLHEILITLGISLIITVVALL 190 Query: 169 ILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQ 228 + + + I+ ++ P+ + I K + G ++ + DDE+G+ +N Sbjct: 191 LSLLLMRRLIDHMMT-PINLLINSAKDIAKKGMYGLRV---KKIGDDELGIFTDQFNRML 246 Query: 229 QLLQRHYEEQ 238 + +++ + Sbjct: 247 EEIEKRDQAL 256 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 704 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 160/678 (23%), Positives = 282/678 (41%), Gaps = 65/678 (9%) Query: 5 RSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKG 64 R+L ++A +LVF + +L ++ + Sbjct: 275 RNLVQALAILLAVWLLVFGGAWVLARGVMDRGLAEEMRIRELNEQLEQRVLERTARLESA 334 Query: 65 DIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGV 124 + I + + A + +Q +MVT + ++++ Sbjct: 335 NQELNREIAERSRAEAELRIAAIAFDSQEG-------------MMVTDAHGVILRVNRAF 381 Query: 125 YSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILH 184 + + S R + + V Sbjct: 382 VEETGYSAEDVVGRKRTMLTSGREDAALDDAMWETVQRCGAWQ----------------- 424 Query: 185 PLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENA 242 + E+ L + + + G++ + + QR ++ ++ A Sbjct: 425 -----GEVWDRRKNGEVYPVWLTISAV--KGQGGLVTHYVATHIDITQRKAVEDQLHKLA 477 Query: 243 MRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLT 298 P++ LPN+ LL++ L V+A + A+M I + + + LL Sbjct: 478 FYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRLLAE 537 Query: 299 LVEKLKSVLSPRMILAQISGYDFAVIANGVQE----PWHAITLGQQVLTIMSERLPI--- 351 + ++LKS + +A++ G +F V+ + + ++L + + Sbjct: 538 VAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVEAVAGKILAALDCPYRLVFD 597 Query: 352 ------ERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + SIG+ +F T ++L +A A + A+ G+N I+FFDP+ Sbjct: 598 AELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPEMQA 657 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 A R+ E+D+ A+E QF ++ QPQV S +L AE LLR P I Sbjct: 658 AITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIP 717 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNLSALQLMHPNMVADMLELLT 522 E GL++ +G WVLE +C LA W + L ++VN+SA Q+ + V +L +L Sbjct: 718 LAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLA 777 Query: 523 RYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSL 582 P L LE+TES + + +A + L++ GV +LDDFG GY+ L ++K L Sbjct: 778 DAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSS---LSYLKRL 834 Query: 583 PIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGI 639 P+D LKID+ FV + D+++ I+ LA+SL L +IAEGVETE QR++LA++G Sbjct: 835 PLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHA 894 Query: 640 AQGFLFARPLPIEIFEES 657 QG+LF++PLP+ FE+ Sbjct: 895 YQGYLFSKPLPLAGFEQW 912 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 171/584 (29%), Positives = 271/584 (46%), Gaps = 27/584 (4%) Query: 93 FQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFV 152 F+ + + + + ++ T + L + + S + PQ +V D+F + Sbjct: 412 FRDVSERRNSQEQLMLLETGIARLNDIVVIVEASPHHGSGPQ----IVFVNDAFERHTGY 467 Query: 153 MSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLH 212 +L I + + + L + + Sbjct: 468 TRDEVLSRMPGMLQGPGTRQDELARIFSALQQWKQARGELVIYRKDGGSFWVDLEIVSVA 527 Query: 213 QDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVA----R 266 + G L + + + QR E+ + A P+++LPN+ LL++ LEQ +A Sbjct: 528 AQN--GDLTHWVAVGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQALADCTIT 585 Query: 267 KQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIAN 326 +Q LM I + + + ++ ++LL + +LK + +A++ G +F V+ Sbjct: 586 RQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGDEFVVMLQ 645 Query: 327 GVQEPWHAIT-----LGQQVLTIMSERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRA 380 + A T + ++VL + E + Q SIGV F + +L +A Sbjct: 646 DLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQA 705 Query: 381 ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKL 440 A + A+ G+N + FFDP + +D+ L HQF + QPQV+ ++ Sbjct: 706 DLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQVD-REQRI 764 Query: 441 VSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LP 498 E LLR + P P I E GL++ +G WVLE++C LA WQ+R L Sbjct: 765 TGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLS 824 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 ++VN+S Q HP+ V ++ + IQP L LE+TES D A+A + L+ G Sbjct: 825 IAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALG 884 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 V +ALDDFGMGY+ L ++K LP+D LKIDK F+ + P D+++ +AII LAQSL Sbjct: 885 VTLALDDFGMGYSS---LSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLG 941 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 L +IAEGVETEAQR +LA G G QGFLF PLPI FE Sbjct: 942 LDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFEAFMQ 985 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 149/505 (29%), Positives = 244/505 (48%), Gaps = 27/505 (5%) Query: 177 CINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ 232 + +R N E L++ + ++ G++ + + Sbjct: 670 AFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENG--GIVTHYVGTFMDITR 727 Query: 233 RH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGV 286 R +E A + LPN+ LL++ L+Q +A ++ AL++I + + Sbjct: 728 RKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKTLNDT 787 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQV 341 L + ++LL + ++L S + +A++ G +F V+ + E A TL +++ Sbjct: 788 LGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLAKRI 847 Query: 342 LTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDP 400 L + + ++ + + SIG+ +F T E L RA A + A+ G+N ++FFDP Sbjct: 848 LASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNTLRFFDP 907 Query: 401 QQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPD 460 + R E+ + A+ + +F ++ Q QV+ G L E LLR Q P+ P Sbjct: 908 EMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQ-GHLTGCEALLRWQHPERGLVAPG 966 Query: 461 GLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG--IMLPLSVNLSALQLMHPNMVADML 518 I E GL++ +G WVL+ +C LA W R L ++VN+S Q + V +L Sbjct: 967 EFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQADFVNQVL 1026 Query: 519 ELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQH 578 +L P L LE+TES I D +A + L+ GV +LDDFG GY+ L + Sbjct: 1027 TVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYSS---LSY 1083 Query: 579 MKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKA 635 +K LP+D LKID+ FV + P D+++ +I L SL L +IAEGVE EAQRD+LA+ Sbjct: 1084 LKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFLARL 1143 Query: 636 GVGIAQGFLFARPLPIEIFEESYLE 660 G QG+LF RPLP++ FE Sbjct: 1144 GCHACQGYLFCRPLPLDQFEAFVRR 1168 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 149/596 (25%), Positives = 272/596 (45%), Gaps = 36/596 (6%) Query: 81 VVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLV 140 R +V+L + R+ E + + I L AN + I Sbjct: 210 PRDRQEVLLVVREITQRRQ--QENQLRLWAKVFEASNEAI------LITDANFRII---- 257 Query: 141 LQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRN----IARELNAI 196 R Y+ +M V + + ++ R ++ L+ +N Sbjct: 258 ---SVNRAYETIMGYREQDVL-GVDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQR 313 Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKA 254 + E ++ ++ + G + + + + A ++ LPN+ Sbjct: 314 KSGEEFPSWFSVTQVT--NSRGEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRI 371 Query: 255 LLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 LL + LE + + + ++ I + ++ L + +L ++L + + Sbjct: 372 LLNDRLEMAITQVRRQGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTG 431 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 ++++ G +F V+ V+ + L ++ + ++ I L SIG+A++ D Sbjct: 432 DTVSRLGGDEFVVLFPRVRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDD 491 Query: 371 L-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 L A +A + A+ KG+N QF+ P RL ESD+ +A++ F + Sbjct: 492 GEDPNTLIKNADAAMYLAKEKGRNNYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHY 551 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QPQ+ +SG+L E L+R + + P I E GL+V +G WVL ++ + LA Sbjct: 552 QPQIIGSSGQLWGLEALIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAE 611 Query: 490 WQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAV 548 W+ +G L +SVN+SALQ + + + +L ++ P + LE+TE+ + D +A+ Sbjct: 612 WRRQGHNHLVVSVNISALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAI 671 Query: 549 AILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIA 605 L+ LR G R+A+DDFG G++ L +++ LPI+VLKID+ FV + P +++ Sbjct: 672 QTLKGLRELGFRIAIDDFGTGFSS---LNYLRHLPINVLKIDQSFVREMLQEPESLAIVE 728 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +II LAQ+L + IAEGVET A+ D L G + QG+ FARP+P IF++ Y ++ Sbjct: 729 SIIALAQALGKETIAEGVETRAEFDVLQARGCRLMQGYFFARPMPPVIFDQWYQQQ 784 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 140/477 (29%), Positives = 230/477 (48%), Gaps = 14/477 (2%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDLPN 252 ++ + + + E G + R E + ++ LPN Sbjct: 228 HTTSRSGGELVVNIQGEVERGEDGRAWLISGTVLDITARIKAESEIHHLINYDTLTGLPN 287 Query: 253 KALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 ++LL + L Q +A+ ++ + + + L + LL + +L + + Sbjct: 288 RSLLHDRLRQAIAQAAQDRHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVARRLAACVR 347 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 LA++ G +F V+ +GV A + +++LT+++E +PI+ +L SIG+A + Sbjct: 348 ESDTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTASIGIAAYP 407 Query: 369 GDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 D L A A + A+ +N FF +R+ E+ + ALE +F + Sbjct: 408 MDGEDGHTLLKHADLAMYKAKELDRNNFHFFSHDMNIKVMERMMLENSMRKALERDEFFL 467 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 QPQV+ SG++ E LLR PD PD I E G +V +G WVL +CR Sbjct: 468 VYQPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWVLMTACRQN 527 Query: 488 AAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 AWQ+ G L ++VNLS Q + + +L ++P L LE+TES + + Sbjct: 528 RAWQKLGFPPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITESAIMRNADQ 587 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSM 603 +AILR L+ G+ +A+DDFG GY+ L ++K PI LKIDK FV+ + P D+++ Sbjct: 588 NIAILRSLKEKGISLAIDDFGTGYSS---LSYLKHFPITRLKIDKTFVQDITTNPDDAAI 644 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 II +AQ+L L +IAEGVET AQ ++L+ QG+LF+RPL + F + Sbjct: 645 AEIIIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTDKFVYLLRD 701 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 145/484 (29%), Positives = 238/484 (49%), Gaps = 23/484 (4%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPN 252 L Q A+ + D+ G + + + + +R E A ++ LPN Sbjct: 557 RRKDGSLFWEQAAIAPI--FDDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPN 614 Query: 253 KALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + LL + L+QV+A ++ AL+ I + ++ Q ++LL + ++L + Sbjct: 615 RRLLNDRLQQVLAVGTRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVR 674 Query: 309 PRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIG 363 +A++ G DF V+ + E A +GQ++L + + P S+G Sbjct: 675 ECDTVARLGGDDFVVMLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVG 734 Query: 364 VAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALEN 422 VA+F E+L RA A + A+ G+N ++FFDP R E+D+ L+ Sbjct: 735 VALFNASQDTVEELLKRADLALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRLGLQE 794 Query: 423 HQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEE 482 +QF ++ QPQV G+L+ E L+R Q P P I E GL++ +G WV+E Sbjct: 795 NQFLLYYQPQVNHA-GRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEA 853 Query: 483 SCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +CR L W+ + L ++VN+SALQ + V+D+L L R L LE+TES Sbjct: 854 ACRQLQLWRTQAHTAQLTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLL 913 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL--- 597 + D +A + L+ GV +LDDFG GY+ L ++K LP+D +KID+ FV Sbjct: 914 VKDVDGVIAKMVALKAHGVGFSLDDFGTGYSS---LSYLKRLPLDQIKIDQSFVSDALSN 970 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 P D++++ A + + + L + +IAEGVET+ QRD+L G QG+ F RP+P+ Sbjct: 971 PKDAALVRATVAMGRGLGMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAELACF 1030 Query: 658 YLEE 661 + E Sbjct: 1031 LVAE 1034 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 134/480 (27%), Positives = 236/480 (49%), Gaps = 16/480 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN--ENAMRFPVSDLP 251 N + E + + L D G + L + +R +E A ++DLP Sbjct: 152 NRRKSGEHFPCWVNISVL--QDGQGEISHFVALFTDISERKEQEARVQHMAEYDALTDLP 209 Query: 252 NKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L+ + L Q + + + A++ + + ++ L + LL + +L + Sbjct: 210 NRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAV 269 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 + + G +F +I + +P A + +++L + + I L CSIG+++ Sbjct: 270 RGLDTVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLM 329 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D + L A A + A+ G+N +F+ + +RL E+ + A+E Q Sbjct: 330 PDDGSDIQTLLMNADLAMYHAKAHGRNTFRFYTREMNTQVAERLLMENRLRRAMEQEQLY 389 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QPQ +M +L+ E LLR + PD +P I E GL+V +G WVL+++CR Sbjct: 390 LVYQPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQ 449 Query: 487 LAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 + W G+ + ++VN+SA QLM + + D+ E L R+ + L LEVTES + D Sbjct: 450 ASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADAD 509 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SS 602 A L ++ GVR+A+DDFG GY+ L ++K D++KID+ F+ LPGD ++ Sbjct: 510 LASRQLAVIKAMGVRLAIDDFGTGYSS---LAYLKRFAPDLVKIDRSFISDLPGDEENAA 566 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +++AI+ LA +L ++ +AEGVE E Q+ +L G QG+L PL E+ +++ Sbjct: 567 IVSAIVHLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQQQ 626 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 125/478 (26%), Positives = 232/478 (48%), Gaps = 16/478 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQ--NENAMRFPVSDLP 251 + E+ +L + + ++ G + + + + E A ++ LP Sbjct: 264 DRRKNGEIYPKRLTINAV--RNQAGEVENYIGIFSDISESKATELKLERLAYYDALTQLP 321 Query: 252 NKALLMEMLEQ----VVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L + LE ++ A+ I + + L + + LL + ++L+ + Sbjct: 322 NRMLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCV 381 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F VI + + + ++VL + + + I+ + SIG+A++ Sbjct: 382 RAADTVARMGGDEFTVILADISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALY 441 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 + E L A A + A+ G+ +FF + + +RL+ ES + +A+ + Sbjct: 442 PDNGNDVETLTKNADMAMYRAKESGRGNYKFFSEEMNVSTSQRLSLESQLHHAVNANLLE 501 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QP++ M SG +V E L+R Q DGS P I E GL+V +G V+ ++ Sbjct: 502 VYYQPKLNMQSGIMVGMEALVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLD 561 Query: 487 LAAW-QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 A W +E G+ L ++VNLSA + P +V ++ + L + +E+TES + D Sbjct: 562 CARWVRETGMNLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVE 621 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---S 602 A+A L + G+ +A+DDFG GY+ L ++K PI LK+D+ FV+ +P D Sbjct: 622 NAIATLEQISRLGIHIAMDDFGTGYSS---LSYLKKFPIHSLKVDRSFVKDIPDDPNDIE 678 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++AAI+ LA+ LNL+++AEGVET+ Q +L + QG+ F++PL F + Sbjct: 679 IVAAILSLAKVLNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPLSAVDFTAFLAD 736 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 126/439 (28%), Positives = 214/439 (48%), Gaps = 12/439 (2%) Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 +R A ++ LPN+ L E L +A + + + + + L Sbjct: 425 KRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVNDTL 484 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + LL + +LK L +A+ G +F ++ + + ++L +S Sbjct: 485 GHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKLSI 544 Query: 348 RLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 I+ +L S+G+A+ D A+ L A +A + A+ +G+N Q F + A Sbjct: 545 PFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEMHREA 604 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +LT E+D+ AL +F ++ QPQVE+++GK+V E L+R Q P + PD I Sbjct: 605 LNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIPLA 664 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL+ +G WVL+ +C +WQ G+ + ++VNLSA Q ++ +L+ L Sbjct: 665 EEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLETTE 724 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 I P L LE+TES + D + L+ LR G+ + +DDFG GY+ L +K P++ Sbjct: 725 IDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSS---LNVLKHFPLN 781 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV+ + D+++ I+ L+Q L L+++AEGVET Q +L +AQG Sbjct: 782 TLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQG 841 Query: 643 FLFARPLPIEIFEESYLEE 661 + F P+P + + Sbjct: 842 YYFCPPVPAIEIAKLLRQS 860 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 146/570 (25%), Positives = 252/570 (44%), Gaps = 28/570 (4%) Query: 115 ELPVQISLGVYSLERPANPQPIAYLVLQAD-SFRMYKFVMSTLSTLVTIYLLLSLILTVA 173 ++ Q L R + A +L D + + + + + Sbjct: 248 DITEQRKAEEALLLRNHAIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQEAVGRN 307 Query: 174 ISWCINRLILHP----LRNIAREL--------NAIPAKELVGHQLALPRLHQDDEIGMLV 221 + P +R RE N L ++L + + D G Sbjct: 308 CRFLQGHDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVP-DPHGGEPR 366 Query: 222 RSYNLNQQLLQ--RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMII 275 + + + + ++ E A ++ L N+ LL E ++Q ++ + ++ I Sbjct: 367 YFVGVQKDITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFI 426 Query: 276 TCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI 335 + + + + + L+ L ++L+S L +A++ G +F ++ Sbjct: 427 DIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIH 486 Query: 336 TLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQ 394 T+ Q++ + I QL CSIG+A F D A+ L S A SA + A+ G N Sbjct: 487 TVVQRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSNN 546 Query: 395 IQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDG 454 +F+ + RL+ E+D+ +ALEN Q + QPQV M + +++ E L+R Q P Sbjct: 547 FRFYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKL 606 Query: 455 SWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNM 513 P I E GL+V +G WV+E + Q G + ++VNLS QL ++ Sbjct: 607 GMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDL 666 Query: 514 VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL 573 V + + L + P L LE+TES + + ++ L + + GV+++LDDFG GY+ Sbjct: 667 VHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSS- 725 Query: 574 RQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRD 630 L ++K LPI+ LKIDK F+ + D+ + +II LA SL +Q+IAEGVE+ Q Sbjct: 726 --LSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYA 783 Query: 631 WLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +L + G QG+L +RP P E E + Sbjct: 784 FLLENGCDEVQGYLLSRPRPFEEMEALLRD 813 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 144/533 (27%), Positives = 256/533 (48%), Gaps = 19/533 (3%) Query: 144 DSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRN----IARELNAIPAK 199 D M + + L ++ LI+ A + I + + I A Sbjct: 109 DWNPMAEMIFGWPEDLAIGKSMMDLIMNQAPRNALIDDIQEFINTGSAPFTQGQIVITAL 168 Query: 200 ELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLM 257 GH+ +G + + QR E+ A R ++ L N+ Sbjct: 169 HRDGHEFPAEMSISPQAVGASFIFNIFVRDISQRKADEEKLETLATRDELTGLINRFSYN 228 Query: 258 EMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL 313 +L++ VA + A++ + + ++ L + LL +L + + + Sbjct: 229 HLLKKEVALAKRHMESLAVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRESDTV 288 Query: 314 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT- 372 A+I G +F +I G+++ L +++L ++ + I + SIG++++ D Sbjct: 289 ARIGGDEFLIIMPGIKDVHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPLDGDN 348 Query: 373 AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQ 432 E L A +A + A+ G+N +FF P E A KR+ E + A+E +QF + QPQ Sbjct: 349 VESLVKNADTAMYQAKDSGRNAYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQ 408 Query: 433 VEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE 492 VE++SG+++ E LLR P+ P I IE L++ +G WVL+E+C+ AWQ Sbjct: 409 VELSSGRILGVEALLRWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQA 468 Query: 493 R--GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAI 550 G L ++VN +A Q ++V + + L + + L LE+TE ++D + Sbjct: 469 LHPGFPLRMAVNFAARQFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRK 528 Query: 551 LRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAI 607 ++ L+ GV +A+DDFG G++ L ++K PID+LKIDK F++ + D++++A I Sbjct: 529 MQALKELGVSIAIDDFGTGFSS---LAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATI 585 Query: 608 IMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +A SL +++IAEGVET+ Q ++L G + QG+LF+RP+P E E + Sbjct: 586 SEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPEQIAEILQK 638 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 133/490 (27%), Positives = 235/490 (47%), Gaps = 17/490 (3%) Query: 184 HPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNEN 241 P + R N + ++L + + D G + + + +R+ E+ Sbjct: 332 RPASVLLR--NYHKDGSMFLNELYIAPV-SDTSGGAVGHFVGVLYDVTQIKRYQEDLEHQ 388 Query: 242 AMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLL 297 A ++ L N+ LL E +Q + + + +L+ I + + + + L+ Sbjct: 389 ANYDTLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIA 448 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + +L++ + +A+I G +F ++ + Q++ + + + I ++ Sbjct: 449 NVGSRLQTCVRDGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIV 508 Query: 358 PHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 CS+GVA F D +E L + A +A + A+ G+N QF+ + + +RL+ ESD+ Sbjct: 509 VTCSMGVARFPEDGEDSESLLANADTAMYRAKSSGRNNFQFYTKEMNATSGERLSLESDL 568 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 +AL+N + + QPQ+++ G ++ E L+R Q P P I EC GL++ +G Sbjct: 569 WHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIG 628 Query: 477 HWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVLE +CR Q+ G+ + +++NLSA QL N V + ++ + P L LEV Sbjct: 629 IWVLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEV 688 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES + + V L L G++++LDDFG G++ L ++K PID LKID+ F+ Sbjct: 689 TESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSS---LAYLKRFPIDRLKIDQSFIF 745 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 PGD+ + II LA L +++IAEGVE +L K G QG+ +RPL + Sbjct: 746 NCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFD 805 Query: 653 IFEESYLEEK 662 L K Sbjct: 806 DLRMFLLTGK 815 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 141/484 (29%), Positives = 244/484 (50%), Gaps = 27/484 (5%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N E+ +LA+ + D G+++ + +E A P++ LP Sbjct: 652 NKRKNGEVYPERLAITAV--KDARGVVINYVASLSDITLHKAAEDEIRSLAFFDPLTGLP 709 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LLM+ L+Q + + AL+ + + ++ L ++LL + ++LK+ + Sbjct: 710 NRRLLMDRLQQALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCV 769 Query: 308 SPRMILAQISGYDFAVIANG-----VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +A+I G +F V+ ++ +G ++++ +++ +E+ ++ SI Sbjct: 770 REGDTVARIGGDEFVVMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFEVHSTPSI 829 Query: 363 GVAMFYGDLTA---EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 G +F D + L+ +A A + A+ G+N ++FFDPQ + R E+D+ + Sbjct: 830 GATLF--DSRPQIIDDLFKQADIAMYQAKKAGRNTMRFFDPQMQDTLNTRTALEADLRKS 887 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 +E +F ++ Q QV+ + V AE L+R P P I E L++ +G WV Sbjct: 888 IERREFNLFYQIQVD-EMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWV 946 Query: 480 LEESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 L+E+C L WQ + L L+VN+SA Q + + + +Y I P L LE+TE Sbjct: 947 LQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTE 1006 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 S ++ + I+ L+ GV+ +LDDFG GY+ LQ++K LP++ LKID+ FV L Sbjct: 1007 SMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSS---LQYIKKLPLNQLKIDQSFVHDL 1063 Query: 598 P---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 D +++ AII +A+SL L +IAEGVET+ QR L G QG+LF++PLPI F Sbjct: 1064 DFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIREF 1123 Query: 655 EESY 658 + Sbjct: 1124 DALL 1127 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 130/479 (27%), Positives = 227/479 (47%), Gaps = 17/479 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPN 252 ++ + + G + +R E A ++ LPN Sbjct: 366 ERREGPPYSGEMTVTAVRTR--AGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPN 423 Query: 253 KALLMEMLEQVVARKQTTA----LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + L+M+ LEQ + + Q T +M + + + + + +L +L++ + Sbjct: 424 RHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVR 483 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 + ++ G +F VI + V++ + +++L +SE PI ++ S+G+ F Sbjct: 484 ISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFP 543 Query: 369 GDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 TA L A A + A+ G+ + F P + LT ESD+ +AL +F + Sbjct: 544 DHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFEL 603 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 QP+V L+ AE L+R + P+ P I E GL++ +G W L E+C + Sbjct: 604 HFQPKVR-ADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRV 662 Query: 488 AAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 +W+ G+ +P +SVN+S Q +V + ++L ++P L LE+TE+ D Sbjct: 663 MSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEH 722 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSM 603 AV LR L++ GV +++DDFG GY+ L ++K+ PID LKID+ FV + D+++ Sbjct: 723 AVGTLRALKDLGVTLSIDDFGTGYSS---LNYLKTFPIDTLKIDQTFVRDVLHSGKDAAI 779 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 ++ II LA++L ++AEGVE Q ++L QGFL++RPLP F K Sbjct: 780 VSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLRTAK 838 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 134/478 (28%), Positives = 242/478 (50%), Gaps = 16/478 (3%) Query: 192 ELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSD 249 E + ++ + DDE G+++ + + + +R + +E A ++ Sbjct: 353 ETLRHKDGTPLPVEMNGSAI--DDEKGVVIGAVLTFRDISERLSYEQELERRAHYDELTG 410 Query: 250 LPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS 305 L N+ LL L+Q A+ A++ + + + L + LL+ + ++L++ Sbjct: 411 LANRVLLKARLQQTTAQAHRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQT 470 Query: 306 VLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 V+ +A+ G +F ++ + A +G+++L ++E + I+ +L S+GV+ Sbjct: 471 VVREADTVARHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVS 530 Query: 366 MFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 +F D + L A +A + A+H G+N +QF+ + + KRL S + A+E ++ Sbjct: 531 LFPRDGTDVDTLLRNADAAMYRAKHLGRNNLQFYSEEMNLSLSKRLRMLSQLRQAVERNE 590 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 + QPQ + G+L+ E L+R Q P+ P I E GL+ +G WVL E+C Sbjct: 591 LCLHYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREAC 650 Query: 485 RLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 R AW G L +SVNLSA Q +P + + ++L + + P L LE+TE+ I + Sbjct: 651 RQGVAWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIAN 710 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGD 600 P +V L +R+ GVR+ALDDFG GY+ L +++ D++KID+ FV PG+ Sbjct: 711 PQQSVQRLSAIRDLGVRLALDDFGTGYSS---LAYLQRYTFDLIKIDRSFVADAIRNPGN 767 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 ++++ +I +A+ L + IAEG ET +L + G QG+ +RPLP E+ + Sbjct: 768 AAIVRTVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGEIEQLF 825 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 120/490 (24%), Positives = 230/490 (46%), Gaps = 19/490 (3%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 I + R N ++ ++ ++ DE G + + + ++ Sbjct: 330 FYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVY--DEAGAIRYFIGSFRDITEQ 387 Query: 234 HYEEQN--ENAMRFPVSDLPNKALLMEMLE----QVVARKQTTALMIITCETLRDTAGVL 287 +++ A ++DLPN+ L + LE + + AL+ + + + + Sbjct: 388 VEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKKVNDTM 447 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + LL + +L+ + +A++ G +F VI + + A + ++L + Sbjct: 448 GHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKILASLHA 507 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 + I+ + SIG+++F D T+ ++L A +A + A+ GK + F+ + + Sbjct: 508 PIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYSAEMTKRE 567 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 + RL E+ + A+E QF + QPQ + + ++ E L+R Q P P I Sbjct: 568 EHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPVDFIPLA 627 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 E L+ + +V+ ++CR W+++G + ++VNLS + ++ + ++L Sbjct: 628 EEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVRQVLEDTGF 687 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 L LE+TES ID +L+ LR GV++A+DDFG GY+ L ++K LP++ Sbjct: 688 PAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSS---LSYLKRLPVNT 744 Query: 587 LKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKID+ FV + DS ++++II +A SL L+++AEG+E Q L QG+ Sbjct: 745 LKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGY 804 Query: 644 LFARPLPIEI 653 L A+P+P E Sbjct: 805 LIAKPMPAEQ 814 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 141/486 (29%), Positives = 245/486 (50%), Gaps = 22/486 (4%) Query: 190 ARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPV 247 A + A E + + L + D++G + R+ + + + +E + A P+ Sbjct: 448 AVHTHYTAAGEPLYVETKAYPL-ERDDLGTVRRAIEVVTDITDKKNREQEIHRLAFYDPL 506 Query: 248 SDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKL 303 + LPN+ L + LEQ Q A++ + + + ++LL E+L Sbjct: 507 TRLPNRRLFFDRLEQAFSASARSGQHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERL 566 Query: 304 KSVLSPRMILAQISGYDFAVIANGVQEPWHAI-----TLGQQVLTIMSERLPIERIQLRP 358 + + +++ G +F V+ N + HA + +++ + + ++ + Sbjct: 567 QEAVRANDTISRQGGDEFMVLLNNLSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHI 626 Query: 359 HCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 SIG+++F G T A++L+ RA +A + A+H G+NQ++FFDP+ ++ D+ Sbjct: 627 GVSIGLSLFLGHDTPADELFKRADAAMYQAKHAGRNQVRFFDPEMQAELEQASALVVDLR 686 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 A+ QF + QPQ G+++ AE LLR + P+ P I E L++ +G Sbjct: 687 QAIWQGQFQLHYQPQ-TANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGR 745 Query: 478 WVLEESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 WVLEE+C LAAW + L+VN+SA Q P VA++ +L P L LE+ Sbjct: 746 WVLEEACGQLAAWADLPAAGNCKLAVNVSARQFRQPEFVAEIRRILAATGADPKLLKLEL 805 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES + + V+ ++ LR+ G+ ++DDFG GY+ L +K LP++ LKID+ FV Sbjct: 806 TESIVMTELADTVSKMQELRDLGIGFSMDDFGTGYSS---LAQLKRLPLEQLKIDRAFVR 862 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 L P D +++ II + ++L++Q+IAEGVET+ Q LA+ G QG+LF+RP+P Sbjct: 863 DLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAA 922 Query: 653 IFEESY 658 F Sbjct: 923 QFAHLL 928 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 128/480 (26%), Positives = 233/480 (48%), Gaps = 16/480 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 + E+ LA+ + G++ + + ++ ++ P++ LP Sbjct: 461 DRRRNGEIFPKWLAISAIRNR--QGVISHFVGVFNDISRQKSTEQQLERLVFYDPLTQLP 518 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L + L V + +L+++ + + L + LLL + ++L + + Sbjct: 519 NRVLFRDRLIHEVGVAERSNKLMSLLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASV 578 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +FA+I G++ A + + ++ + IE +L SIG+A+ Sbjct: 579 RKSDTVARLGGDEFAIILPGMERAEDAAHVAETIINQLQVPFSIEENELFVGASIGIAVH 638 Query: 368 YGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D + L A +A F A+ GK +FF P KRL E+++ A++N + Sbjct: 639 GQDGDDYDSLTMNADAAMFKAKESGKGTYKFFTPDMNIQNAKRLVMEAELRRAVDNQELM 698 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP+V+ S ++V E L+R P P I E GL+V +G VL +C Sbjct: 699 LHYQPKVDAESRQIVGMEALVRWVHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQ 758 Query: 487 LAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 + W + G+ + ++VNLS Q PN++ + E+L + L LE+TES + D Sbjct: 759 VKQWWDMGLPQVQVAVNLSPRQFQEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVD 818 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SS 602 + ++ L++ GVR+++DDFG GY+ L ++K P+ LKID+ FV L GD +S Sbjct: 819 NTIETVKKLKDLGVRISIDDFGTGYSS---LSYLKKFPLHALKIDQSFVRDLGGDDDGAS 875 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +I++II +A+++ L ++AEGVET Q ++L QGF ++PLP F ++ Sbjct: 876 IISSIISMAKAMALGVVAEGVETAQQMEFLRGQECQQVQGFFLSKPLPPSDFLALLERQQ 935 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 149/468 (31%), Positives = 234/468 (50%), Gaps = 26/468 (5%) Query: 214 DDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 E G ++ + QR E A ++ LPN+ LLM+ + +A Q Sbjct: 1034 QGEQGQPDAILAIDTDIGQRKATEREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRR 1093 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 AL+ I + + L Q ++LL + +L + + +A++ G +F V+ G Sbjct: 1094 QGGALLFIDLDNFKTLNDTLGHDQGDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIEG 1153 Query: 328 VQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL---TAEQLYSR 379 + A T+G+++L +++ ++ R SIGVA F GD T +L + Sbjct: 1154 LSTHPGELAMSARTVGEKILAVLATPYVLQGYHYRSTPSIGVAPF-GDGRTSTVGELLKQ 1212 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A A + A+ G+N ++FFDP R E+D+ AL QF + QPQ++ G Sbjct: 1213 ADLAMYQAKTAGRNTLRFFDPGMQAVVTARAELENDLRTALAREQFMLHYQPQID-RRGS 1271 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQE---RGIM 496 + E L+R P P I E GL++ +G WVL +C LA WQ RG Sbjct: 1272 VTGVEALVRWPHPQRGMVSPGEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRG-H 1330 Query: 497 LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRN 556 L ++VN+S+ Q H V D++ +T L LE+TES ++D +A + LR+ Sbjct: 1331 LSMAVNVSSRQFHHEAFVEDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRS 1390 Query: 557 AGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQS 613 GV +LDDFG GY+ L ++K +P+D LKID+ FV L P D++++ II L++S Sbjct: 1391 HGVGFSLDDFGTGYSS---LSYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRS 1447 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 L L +IAEGVET QR L +AG QG+ F+RPLP E+ +++ Sbjct: 1448 LGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLPETALEDFLVQK 1495 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 153/587 (26%), Positives = 265/587 (45%), Gaps = 40/587 (6%) Query: 106 VPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLL 165 + ++ V++ E Q AYL + + R+ +V+S + Sbjct: 359 LVILWNVQMRRQVRMRTEALHAEIARREQTEAYLKISSRMARVGSWVLSLPEKTLYWSEE 418 Query: 166 LSLIL------TVAISWCINRLILHPLRNIARELNA-IPAKELVGHQLALPRLHQD---- 214 + I + + I + L + + +L + Sbjct: 419 VLDIHECPPEFAPTLDSALAFYPEEWRSRIVQALEECLQKGDSFDEELPILTCKDKLLWI 478 Query: 215 --------DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVV 264 D G + R Q + + A ++ LPN+ L ++ LE + Sbjct: 479 RIIGQAVYDLHGNITRIEGAIQDISAQKVAESRIQHLAFYDSLTSLPNRQLFIDRLEHTL 538 Query: 265 ARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYD 320 A A++ I + + + ++LL + ++ L +A+ G + Sbjct: 539 AYSARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQQVAMRIAGCLRESDTVARFGGDE 598 Query: 321 FAVIANGV-----QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAE 374 F V+ + + + A + +++L + + SIGV +F T + Sbjct: 599 FVVLLHELSGNHQEAAAQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQPTTVD 658 Query: 375 QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVE 434 ++ RA A + ++ G+N I+FFDP+ R+ E D+ N L N +F + QPQV+ Sbjct: 659 EILKRADLAMYQSKAAGRNVIRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCYQPQVD 718 Query: 435 MTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG 494 G+L+ AE LLR + P P I E GL+V+VG+WV+ +C+ L W ++ Sbjct: 719 -NQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQP 777 Query: 495 IM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILR 552 + L L+VN+SA QL + V ++E+L P L LE+TES +++ +A + Sbjct: 778 LTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKMT 837 Query: 553 PLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIM 609 L+N GV ++DDFG+GY+ L ++K LP+D LKID+ FV + P D+ + II Sbjct: 838 ELKNIGVGFSIDDFGIGYSS---LSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIA 894 Query: 610 LAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 L +SLNLQ+IAEGVET +QR++L G QG+LF++P+P + FE Sbjct: 895 LGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPADEFER 941 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 134/480 (27%), Positives = 232/480 (48%), Gaps = 16/480 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDL 250 +N + H E +L LQR E A ++DL Sbjct: 399 VNHRFWGFIELHNCTREYHWSLQEESILFAMSASISAALQRQDKEEIIRHQAFHDALTDL 458 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ L + L +A Q A+M + + + L + + LL + +L+ Sbjct: 459 PNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLINDTLGHSIGDELLKEVALRLQDC 518 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 L +A+ G +F V+ ++ AI ++L + I R +L SIG+A+ Sbjct: 519 LRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDALKAAFVIRRHELFVTTSIGIAI 578 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D AE L A A + ++ +G+ Q ++P A+++ E+ + +AL+ +F Sbjct: 579 YPEDGQEAEILLQNADVALYRSKEQGRGTCQLYNPTMN--AKEQFILENSLRHALDRDEF 636 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QP+V + +G++V E L+R + P+ P I E GL+V +G WVL +C+ Sbjct: 637 ILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIPIAEETGLIVELGEWVLRTACQ 696 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 W + G+ L +++NLSA Q PN+V + +++ + P L LE+TE+ + + Sbjct: 697 QAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIESTGLNPQQLELEITETIAVKNM 756 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 A +IL L+ GV +A+DDFG GY+ L ++K LP + LKID+ F++ L D Sbjct: 757 EFAKSILCNLQALGVHIAMDDFGTGYSS---LNYLKQLPFNTLKIDQSFIQDLKPASKDV 813 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 +I A+I L + L+L+++AEGV+ E Q + L I QG+LF+RPL ++ + Sbjct: 814 EIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQGYLFSRPLSVDSTTDILQAN 873 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 161/672 (23%), Positives = 312/672 (46%), Gaps = 24/672 (3%) Query: 5 RSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKG 64 SL KQ V V +V F + + Q + + S A Sbjct: 8 HSLAFKQARTVFLVSVVLGLCFSLYHILADLHQEQRRIEEHYQFKLLQNYSNASQAAYHL 67 Query: 65 DIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGV 124 + AE + +++ + R +V + F + E + T+L + + Sbjct: 68 NHLLAEQVASTLMMDNAIYRVKIV--DDFGDVLTQKHREIDSQSLTTQLLSKILTPAQPF 125 Query: 125 Y--SLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLI 182 Y L +P + L D + + + +V L +++LT + + + Sbjct: 126 YKTELHQPNANAIVGELSFSVDGSSIADAFIKKSTRIVLFDLFRNILLTSILLFFFYFKL 185 Query: 183 LHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENA 242 P+ + +N++ ++ + L LP + +DE+G L S++ Q + N+ A Sbjct: 186 SKPIITLINWVNSLQNRK---NALELPPGNNNDELGRLALSFHNLWQARAAAESQLNQLA 242 Query: 243 MRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLT 298 ++ L N++LL++ L + + Q+ L + + + L + L+ T Sbjct: 243 YFDTLTGLANRSLLLKSLNETLKESQSEQYPGVLFYLDLDRFKTINDSLGHTIGDNLMRT 302 Query: 299 LVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRP 358 + ++L++ L P I A+I G +FA++ + A +Q+LT++S I+ QL Sbjct: 303 IAKRLEAWLQPGEIAARIGGDEFAILIPKL-NKEDAANKAKQLLTLISNPYSIDDHQLYC 361 Query: 359 HCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 SIG++ F ++ + +A +A + A+ G+N+ F++P+ + L E + Sbjct: 362 TVSIGISTFADKGISSIDVLRQADTALYRAKVAGRNKYMFYEPEMQAQVESFLEIEKGLH 421 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 AL Q ++ QPQV +++ E L+R P+ P + E G ++ +G Sbjct: 422 EALHKGQLELYYQPQVNAQ-QQIIGVEALIRWNHPEKGVLPPGVFMPIAEETGQILQIGD 480 Query: 478 WVLEESCRLLAAWQ-ERGIM---LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLIL 533 W++E++C A W+ E+ + L++N+S LQ V + L + I + L Sbjct: 481 WIIEQACFQYAQWKKEQVLPETFHRLAINISPLQFSKNAFVEHITHALKQANITGEHIEL 540 Query: 534 EVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF 593 E+TES +++ +A+ + L+ +++++DDFG GY+ L+++K L +DVLKID+ F Sbjct: 541 EITESLLLENVESAINKMAELKELDLKISIDDFGTGYSS---LRYLKHLAVDVLKIDRSF 597 Query: 594 VEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 V L D ++++ IIM+A+ L+L++IAEGVETE + + L + G QG+LF +PLP Sbjct: 598 VTQLHLDQSDQAIVSTIIMIAERLSLEVIAEGVETEEEFNTLVELGCEQFQGYLFGKPLP 657 Query: 651 IEIFEESYLEEK 662 +E+ + E + Sbjct: 658 VEMITQKLRESR 669 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 130/502 (25%), Positives = 237/502 (47%), Gaps = 21/502 (4%) Query: 175 SWCINRLILHPLRNIARELN----AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQL 230 R + +R E+ + + +H D G + L + Sbjct: 734 DGIYFRQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVVNTVH--DRQGTVTNYIALFTDI 791 Query: 231 LQRH--YEEQNENAMRFPVSDLPNKALLMEML----EQVVARKQTTALMIITCETLRDTA 284 + + A +++LPN+ L ME L +Q + A++ I + ++ Sbjct: 792 SAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKNIN 851 Query: 285 GVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ-QVLT 343 L + +L+T +L + ++++ G +F +I +++ + + ++L Sbjct: 852 DSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDSHQIEEIMKHRLLP 911 Query: 344 IMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQ 402 +M + +L CSIG+++F D + L A +A + A+ G+N F+ + Sbjct: 912 LMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFYTEEL 971 Query: 403 MEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGL 462 A +RL+ E+ + +E ++ + QP++++ +GK E LLR Q PD P Sbjct: 972 NSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHGMISPMEF 1031 Query: 463 IDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELL 521 I E GL++ +G V+ +CR L+ W G+ + LS+N+SA+Q V D+++L+ Sbjct: 1032 IPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDLVQLV 1091 Query: 522 TRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKS 581 + P + LE+TE+ ++D + ++ L++ G ++DDFG GY+ L ++ Sbjct: 1092 REEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSS---LNYLHR 1148 Query: 582 LPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVG 638 PID LKID+ F+ G+ P D ++I AII L +L++Q+IAEGVE E + L AG Sbjct: 1149 FPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCD 1208 Query: 639 IAQGFLFARPLPIEIFEESYLE 660 QG+ ARPL E E L Sbjct: 1209 GIQGYFVARPLTPEQVPEWLLA 1230 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 149/494 (30%), Positives = 247/494 (50%), Gaps = 25/494 (5%) Query: 184 HPLRNIARELNAIPAKELVGHQLALPRLHQ--DDEIGMLVRSYNLNQQLLQRH--YEEQN 239 L + + + L + ++ G + +N + QR E Sbjct: 557 RALLSSGEWRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQAIFAINTDITQRKSAENEIL 616 Query: 240 ENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREIL 295 A+ ++ LPN+ LL++ L +A ++ AL+ I + + L ++L Sbjct: 617 HLALYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLFIDLDNFKLLNDTLGHDMGDLL 676 Query: 296 LLTLVEKLKSVLSPRMILAQISGYDFAVIA------NGVQEPWHAITLGQQVLTIMSERL 349 L + +L S + +A++ G +F VI + + T+ +++ + + Sbjct: 677 LRQVAPRLSSCVRESDTVARLGGDEFVVILMGDFGEDHDEALTQISTICERIRSAFIQPF 736 Query: 350 PIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQK 408 ++ SIG+A+F T +L RA A + A+ G+N ++FFDP A Sbjct: 737 NLDPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQAKASGRNAMRFFDPDMQAAMNA 796 Query: 409 RLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIEC 468 R ES++ + E ++F + Q QV+ S ++ AE L+R Q P P I + E Sbjct: 797 RAILESELYKSWERNEFILHYQLQVD--SRGIIGAEALVRWQHPRRGLLPPSEFIPQAEE 854 Query: 469 CGLMVTVGHWVLEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL++ +G WVLE +C LA+W Q + L LSVN+S+LQ P+ V ++ +L R Sbjct: 855 TGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSLQFCQPDFVEQVISILDRTGA 914 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 P L LE+TES + D +A + L+ GV ALDDFG+GY+ L ++K LP+D Sbjct: 915 NPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDFGIGYSS---LYYLKRLPLDW 971 Query: 587 LKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 +KID+ FV + D++++ I++LA+S+ L +IAEGVET AQ+D+LA G QG+ Sbjct: 972 VKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGVETGAQKDFLASHGCTAYQGY 1031 Query: 644 LFARPLPIEIFEES 657 LF+RPLP+E FE Sbjct: 1032 LFSRPLPLEQFERF 1045 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 160/664 (24%), Positives = 282/664 (42%), Gaps = 65/664 (9%) Query: 10 KQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEA 69 K V + + I L+ R N ++ R + ++ A+++G+ A Sbjct: 13 KLRKAHILAVGLALLIATVTLISMEYASLRRNMTVTMQIQMRIMAGNIAQALVRGEHEVA 72 Query: 70 EAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLER 129 +LAS+ A + A VL + Q ++ + + + VQ + + Sbjct: 73 SEVLASLAEAPEIDTA--VLYDMQQNRFAEYVRPGSLSRLFDMMVADQVQRHS---DMHK 127 Query: 130 PANPQPIAYLVLQADSFRMY---KFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPL 186 QP+ Y +Q M K + L V +++ L+ A + ++RL Sbjct: 128 SEIWQPVVYGGMQVGMLYMRSNMKGLYRQLLWYVGTTVMVMLVTLFAAALLLSRL----- 182 Query: 187 RNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFP 246 Q+ + + E A Sbjct: 183 -----------------------------------------QRAMLKAEERAGFLANYDT 201 Query: 247 VSDLPNK----ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 V+DLPN+ +LE R+ AL++ + + L + LL + ++ Sbjct: 202 VTDLPNRHAFSRHFHLLLEGARHRRGVLALLVFDLDDFKVINDTLGHDVGDKLLHLVAQR 261 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 L + + ++ G +FA++ + + + + + + ++ + + SI Sbjct: 262 LMVAAGKKNTVYRVGGDEFAMMLDQPADVENVEAVANRFIRALAPPIVLNDRNFYIGVSI 321 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G +++ D A L A +A + A+ +GKN Q F + + RL E+++ ALE Sbjct: 322 GASIYPYDGEDAAHLLRDADAAMYYAKSRGKNNFQMFSAEMHHKSSTRLLLETELRVALE 381 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 QF ++ QPQ + KLV E L+R P P I E GL+V +G WVL Sbjct: 382 EKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCPSSFIPVAEETGLIVRIGEWVLR 441 Query: 482 ESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 E+CR W+ G+ L +SVNLS Q N+V M +++ R + L LE+TE+ + Sbjct: 442 EACRQAMEWKALGVPLRMSVNLSGRQFRQENLVQTMTKIIERTGMDSSLLELEITETVLM 501 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---P 598 +D A L L+ G+ +A+DDFG GY+ + ++K P+ LKID+ F+ + P Sbjct: 502 EDAEATTTRLADLKAMGMHLAIDDFGTGYSSM---AYLKRFPVSRLKIDRSFIRDIPNDP 558 Query: 599 GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 D ++ A I +A SL L+++AEGVET+AQ +L + G + QG+LF+RP+ E Sbjct: 559 DDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDMVQGYLFSRPVSAREMAELV 618 Query: 659 LEEK 662 + K Sbjct: 619 ITGK 622 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 144/661 (21%), Positives = 283/661 (42%), Gaps = 38/661 (5%) Query: 32 FHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPN 91 +H V + N A E + P S+ A L S K A V Sbjct: 419 YHFVNKTFCNLAGIKEE--DMLNTPSSNLAELLGDEIAHHCLDSDKAALAQDSPHVSFET 476 Query: 92 QFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKF 151 ++ K +I E + E+ I + + + + + + Sbjct: 477 IPRSNAKPYILEITKVKLKNAQGEVVGLIGISKDITNKRQQEEDLKLADIVYQNSSEAMM 536 Query: 152 VMSTLSTLVTIYLLLSLILTVAISWCI----------------NRLILHPLRNIARELNA 195 + + + ++ I LS I + S I +L+ ++ Sbjct: 537 ITDSKNEIIAINPALSEITGYSSSELIGKNPNVFSSGKQNPEFYQLMWEEIKLTGTWQGE 596 Query: 196 I----PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSD 249 I + L++ ++ D+ G + R L + ++ A +++ Sbjct: 597 IWNTKKNGKEYPEWLSISTIY--DDYGNVFRRIALFSDITEKKKKDALILRQAKYDSLTN 654 Query: 250 LPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKS 305 LPN+ + ++ LEQ + AL+ I + + + LL+ +++ Sbjct: 655 LPNRIMFIDRLEQEIKVSHRKNQKFALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITH 714 Query: 306 VLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 + +A++ G +F ++ + + + + ++ Q+VL +SE I ++ S+GV Sbjct: 715 CIREVDTVARLGGDEFTILLSDIADIHNVESICQKVLQTLSEPFFISKMYTYISASLGVT 774 Query: 366 MFYGDLTAE-QLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 ++ D ++ +L A A + A++ G+N+ +F E A L +D+ A+ +Q Sbjct: 775 IYPNDASSTLELLKNADQAMYLAKNLGRNRFCYFTASMQEEALDHLELINDLRKAISLNQ 834 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 ++ QP VE+ +G + AE LLR + P P I E GL++ +G WV +++ Sbjct: 835 LEVFYQPIVELQTGVIRKAEALLRWKHPVRGMVSPAEFIPLAEESGLIIEIGDWVFKQTV 894 Query: 485 RLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 + + +++ G+ + +SVN S +Q D L L ++ +++E+TE +++ Sbjct: 895 QHINTCKDQLGLDIQISVNKSPVQFRESIDQLDWLAYLAENQLPGENIVIEITEGLLMNN 954 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GD 600 + + L R+AG+ +++DDFG GY+ L ++K +D LKID+ F + D Sbjct: 955 NTSTMERLSKFRSAGIGLSMDDFGTGYSS---LSYLKKFALDYLKIDQSFTRNIAPGSED 1011 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 + AII +AQ L L++IAEG+ET+ Q + L AG QG+ F+RP+P E F + Sbjct: 1012 MILSEAIITMAQKLGLKVIAEGIETKEQMELLIGAGCDYGQGYYFSRPIPAEDFLQLLAS 1071 Query: 661 E 661 + Sbjct: 1072 D 1072 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 119/473 (25%), Positives = 224/473 (47%), Gaps = 28/473 (5%) Query: 215 DEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 DE G + + + ++ + A ++ L N+ + +E + R + Sbjct: 237 DENGAAKVVSGTVVDVTELTQAQDQILQLAHFDSLTGLANRNAFRKRVELAMERAKQYGH 296 Query: 270 -TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILA-------------- 314 A++ + + + L + + LL + +L ++ + Sbjct: 297 LGAVLFLDLDNFKRINDTLGHSIGDQLLQEVARRLTDIVRGSDSICGTNFNHAIDDNLIS 356 Query: 315 QISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TA 373 ++ G +F V+ + + A ++VL + + + + + SIG+A+F Sbjct: 357 RLGGDEFTVLLPEIGKIKDAEHAARRVLNSIGDIINLSGHDIVVTPSIGIAIFPHHGENV 416 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 + L A +A + + GKN + F A++RL ES + +A++N + ++ QPQ+ Sbjct: 417 DSLLKNADAAMYYVKRAGKNDYELFVNSMNVVAKRRLELESFLRHAIDNKELSVNYQPQI 476 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 493 ++ +G+++ AE LLR + P I E GL+ +G WVL E+CR + W++ Sbjct: 477 DIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDD 536 Query: 494 GIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILR 552 G+ + ++VN+S Q ++ + ++L + L LE+TE+ +DD AV L Sbjct: 537 GLPEIQIAVNISVQQFAKQSLDKLVSKVLLETGLPVHCLELEITENMLMDDVEGAVETLH 596 Query: 553 PLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIM 609 L++ G+ +A+DDFG GY+ L ++K PID LKID+ F+ + P D+++ AII Sbjct: 597 KLKDLGINLAIDDFGTGYSS---LSYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIIS 653 Query: 610 LAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +A +L L +IAEGVE +Q ++L + QG+ F+RPL E K Sbjct: 654 MAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFSRPLIASDMEALLRSHK 706 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 153/476 (32%), Positives = 237/476 (49%), Gaps = 16/476 (3%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDL 250 L+ + +L++ L DE G+L + + QR E A P++ L Sbjct: 314 LDRRKGGQWYPAELSISAL--RDEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPLTRL 371 Query: 251 PNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN++ L L++ + R A+M I + + + LL + +L V Sbjct: 372 PNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRV 431 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + R +LA++ G +F ++ +G + +L + + L +E ++ SIG+++ Sbjct: 432 VGERGMLARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISV 491 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F D A L A A + A+ GKN QFFD +RL E+ + ALE H+F Sbjct: 492 FPHDGRDARTLLKNADVAMYRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERHEF 551 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QPQ+ L AE LLR + P P I E GL+ +G WVL E+CR Sbjct: 552 ELHYQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACR 611 Query: 486 LLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 LAAW +G+ + L+VNLS Q P++ A + L + G L LE+TES + P Sbjct: 612 QLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSP 671 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---S 601 AV++L L++ GV +++DDFG GY+ L H+K P+D LKID+ FVEGLP D + Sbjct: 672 TEAVSLLSELKSLGVWLSIDDFGTGYSS---LSHLKRFPLDTLKIDQSFVEGLPDDDDNA 728 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 ++ AI+ +A+ L Q++AEGVE+E Q +L G + QG+ F RPLP F Sbjct: 729 AIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFAAL 784 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 125/446 (28%), Positives = 230/446 (51%), Gaps = 14/446 (3%) Query: 224 YNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITC 277 + Q + +R A ++ LPN+ LL + +EQ +++ + A+M++ Sbjct: 246 RGIVQDITERKMQQGRIEYLANHDALTGLPNRNLLSDRMEQAMSQARRTGQLVAVMVLDL 305 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + + + LL + +LK + +A++ G +F V+ + A + Sbjct: 306 DRFKHINDSFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDEFVVMLVNLATQADADVI 365 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQ 396 +++L E ++ L S+GV++ D T AE L A +A + A+ G+N + Sbjct: 366 ARKILDTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAALYAAKEHGRNCYR 425 Query: 397 FFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSW 456 F+ + +++ E+ + A+ NH+ ++ QP+V++ +G++ E L+R ++P Sbjct: 426 FYTRELGARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGV 485 Query: 457 DLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVA 515 PD I E CGL++ +G WVL +C AW+ G + ++VNLSA Q ++ A Sbjct: 486 IPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAA 545 Query: 516 DMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQ 575 + L + P +L LE+TES + D +A LR L+ GV ++LDDFG GY+ Sbjct: 546 MVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSS--- 602 Query: 576 LQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWL 632 L ++K LPIDV+KID+ F++ + +S+ +II +A+SL+++ +AEGVETEAQ +L Sbjct: 603 LSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFL 662 Query: 633 AKAGVGIAQGFLFARPLPIEIFEESY 658 + QG+ F+ P+ + + Sbjct: 663 NRHRCHAMQGYYFSHPVTGDEIADML 688 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 123/476 (25%), Positives = 221/476 (46%), Gaps = 16/476 (3%) Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNK 253 ++ + D G ++ + + R E + A ++ LPN+ Sbjct: 605 RKDGSVIWISENARAV--RDRQGNILYFEGTVEDISARKQAELTIHYQAFHDLLTGLPNR 662 Query: 254 ALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSP 309 AL + L Q +A + A+ + + + L A + LL + ++L L Sbjct: 663 ALFDDRLNQALADARRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLRE 722 Query: 310 RMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG 369 +A+ G +F ++ VQ P ++ + +++L + ++ L S+G+A++ Sbjct: 723 IDTIARWGGDEFTLLLPHVQTPADSVKIAERLLASLKPPFSLKGHNLHITASLGIALYPH 782 Query: 370 DL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIW 428 D L A +A + A+ +G+N + + P + L ES++ ALE + ++ Sbjct: 783 DGEDGTTLLRNADAALYRAKEEGRNGLYCYTPMLNSRGHELLALESELHKALEQQELDVY 842 Query: 429 LQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLA 488 QPQ+ +G+++ E L+R Q P I E GL++ +G WVLE +C Sbjct: 843 YQPQINAATGEILRLEALVRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCR 902 Query: 489 AWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 WQ RG L +VNLS Q P++V + E L + L LE+TE+ + + + Sbjct: 903 QWQARGFPGLGTAVNLSVRQFQQPHLVQQVAETLQYTGLAADRLELEITETTAMQNVNLT 962 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMI 604 +L L GV +ALDDFG GY+ L +++ P+ +KID+ F++ LP D +++ Sbjct: 963 RTLLHELDQMGVGIALDDFGSGYSS---LNYLRQFPLHSIKIDRTFIQELPYSVQDQAIV 1019 Query: 605 AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 A+I L + LNL ++AEGVE+++Q L G I QG+ F P+ + + Sbjct: 1020 KAVIALGRGLNLSVVAEGVESQSQLKVLRSLGCDIIQGYFFGPPIAAAAMTQLLEQ 1075 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 137/471 (29%), Positives = 239/471 (50%), Gaps = 17/471 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 + L + + DE G + + +R E + A ++ LP Sbjct: 755 DRHKEGFDFPKWLMMSIV--RDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLP 812 Query: 252 NKALLMEMLE----QVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L LE + + A+M I + ++ L ++LLL + +LK+++ Sbjct: 813 NRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIM 872 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 I+A++ G +F V+ + + + + + +++ I+ L SIG+++F Sbjct: 873 GNDDIVARLGGDEFVVVLSDTDH-DRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLF 931 Query: 368 YGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D E L A A + A+ G+N QFF +R E+ + A+ ++ Sbjct: 932 PTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELL 991 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QPQV+++SG++V E L+R Q P+ PD I E +++ +G WVLE + Sbjct: 992 LYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQ 1051 Query: 487 LAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 LA W+++G L ++VNLSA QL +VAD++ +LT++++ G L LE+TES + P Sbjct: 1052 LAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPE 1111 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSS 602 +L LR G+ +A+DDFG GY+ L ++K LP+D LK+D+ FV+ + P D++ Sbjct: 1112 QNAKLLAELRQHGIELAIDDFGTGYSS---LSYLKLLPLDRLKLDRSFVKDIESDPNDAA 1168 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 + AA I +A L L ++AEGVE EAQ L+ G + QG+ F++PL + Sbjct: 1169 ISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 130/479 (27%), Positives = 236/479 (49%), Gaps = 25/479 (5%) Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE---------QNENAMRFP 246 E ++ L + +G Y + + + + + + A Sbjct: 336 RADGEKFLAEVTLTPIM----LGKRHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDA 391 Query: 247 VSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ LPN+ L + LE + + AL I + + L + +L+ + ++ Sbjct: 392 LTGLPNRTLFSDRLEHGLKLAERHLGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKR 451 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 LK+ + LA++ G +F +I ++ L Q++ ++++ + IE L CSI Sbjct: 452 LKAKIRQEDTLARLGGDEFTIIMENFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSI 511 Query: 363 GVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G++ + D A L A +A + A+ +G+N QF+ + A +R+ E+ + A++ Sbjct: 512 GISFYPQDTQNANDLVKYADAAMYKAKEEGRNNFQFYSTEMTTLAYERVVMEASLRQAIK 571 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 N +F ++ QPQV + ++ E L+R + P LPD I E GL++ + WV+ Sbjct: 572 NEEFILYYQPQVNAQTSRMTGMEALIRWEHPHLGMILPDKFIPLAEESGLILEIDRWVMR 631 Query: 482 ESCRLLAAWQERGIMLPL-SVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 + + + W RG+ + S+NLS QL N + + E L +P L EVTE + Sbjct: 632 TAMKQVREWYARGLDPGVLSLNLSMRQLKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQM 691 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 + P AVA L +++ G+ +A+DDFG GY+ L ++K LP+ LKID+ F+ G+P D Sbjct: 692 MKRPDDAVASLGEIKSMGISIAIDDFGTGYSS---LGYLKRLPVSRLKIDQSFIHGIPED 748 Query: 601 ---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 ++++ A I LA+SL+L +IAEGVE E Q+++L G QG+ + RP+ + E+ Sbjct: 749 RENAAIVKATIALAKSLSLSIIAEGVENEEQKEFLLFNGCISMQGYYYGRPMTADQIEK 807 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 144/481 (29%), Positives = 244/481 (50%), Gaps = 23/481 (4%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLPNKA 254 EL L++ + + D G + R + + R E E A +++LPN+ Sbjct: 567 KNGELHAKWLSISVIRRAD--GSIYRHVGQFSDITEKKRKDELIWEQANFDTLTNLPNRR 624 Query: 255 LLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 L + Q + + AL+ + + + + + LL+ + +L S + Sbjct: 625 LFADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREE 684 Query: 311 MILAQISGYDFAVIANGVQEPWH-----AITLGQQVLTIMSERLPIERIQLRPHCSIGVA 365 +A++ G +F VI NG+ + A + +++ + +++ + SIG+ Sbjct: 685 DTVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIV 744 Query: 366 MFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 +F G E+L + +A + ++ KG+N I FFD E +KR E+ + ALE + Sbjct: 745 LFRGHSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQEILEKRGQLETALRGALERKE 804 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 F + Q Q++ +SG+ + AE LLR P I E GL++ +GHWVLE +C Sbjct: 805 FLLHYQLQMD-SSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETAC 863 Query: 485 RLLAAWQERGI--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRID 542 LA WQ L ++VN+SA+Q VA + +L + IQP L LE+TES +D Sbjct: 864 AQLARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLD 923 Query: 543 DPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---G 599 D + ++ + L+N GV+ ++DDFG GY+ L ++ LP+D LKID+ FV + Sbjct: 924 DINDSILKMEALKNLGVKFSMDDFGTGYSS---LSYLSRLPLDQLKIDQSFVRDITTDQH 980 Query: 600 DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 D++++ II +A SL +++IAEGVETE QR++L G QG+L+A+P+PIE E Sbjct: 981 DAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEELEIKLA 1040 Query: 660 E 660 + Sbjct: 1041 Q 1041 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 136/499 (27%), Positives = 244/499 (48%), Gaps = 17/499 (3%) Query: 178 INRLILHPLRNIARELNAIPAKELVGHQLALPRLHQD--DEIGMLVRSYNLNQQLLQRH- 234 + +L L + + G L + D G ++ ++ + Q Sbjct: 585 FYQQMLQALDEHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYISIYTDISQLKD 644 Query: 235 -YEEQNENAMRFPVSDLPNKALLMEML----EQVVARKQTTALMIITCETLRDTAGVLKE 289 A+ P++ LPN+A+L + L + + AL+++ + ++ Sbjct: 645 SEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGH 704 Query: 290 AQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERL 349 + LL + +LK L ++ ++ G +F V+ P L ++++ + + Sbjct: 705 HFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPF 764 Query: 350 PIER-IQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + ++ SIG++++ TAE+L +A +A + A+H G++ ++F + A+ Sbjct: 765 LLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYFSEELFLKAK 824 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 RL E + A+ +F ++ QPQ+ + + +++ AE LLR P+ P I E Sbjct: 825 ARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAE 884 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL+ +G WVL E+CR W ++ + + L+VNLS LQL H ++ + +L Sbjct: 885 ETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGF 944 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 L LE+TES ++ V IL+ LR G+R+A+DDFG GY+ L ++K P+DV Sbjct: 945 PAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSS---LAYLKQFPLDV 1001 Query: 587 LKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKIDK FVE +P D + A I+ + SL L ++AEGVET+AQ ++L + G QG+ Sbjct: 1002 LKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGY 1061 Query: 644 LFARPLPIEIFEESYLEEK 662 L++ PLP E F + ++ Sbjct: 1062 LYSMPLPAEEFAQLLSQQN 1080 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 148/503 (29%), Positives = 247/503 (49%), Gaps = 25/503 (4%) Query: 174 ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 + +NR I + + + L+ ++ DE G L+ + R Sbjct: 644 VREIVNRAIASNTSFKLQHRDITKSGTLLWEEVNGVPF--FDEHGELMGLRGTGMNITDR 701 Query: 234 HYEEQNE--NAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E+ A P++ LPN+ LL++ L+ +A AL+ I + + L Sbjct: 702 KRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHALASSTRSGREGALLFIDLDNFKTLNDTL 761 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVL 342 ++LL + +L S + +A++ G +F V+ + E ++G+++L Sbjct: 762 GHDIGDLLLQQVALRLASCVREGDTVARLGGDEFVVMLEELSEQTLEAAAQTESIGEKIL 821 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +++ + + R SIG +F + E+L +A A + A+ G+N ++FFDPQ Sbjct: 822 LTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEELLKQADIAMYQAKKAGRNTLRFFDPQ 881 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQV-EMTSGKLVSAEVLLRIQQPDGSWDLPD 460 E R E ++ ALEN QF ++ Q Q+ ++ + AE L+R P+ P+ Sbjct: 882 MQETVIARALLERELSKALENDQFQLYYQIQMTDL--NEPFGAEALIRWIHPERGLIPPN 939 Query: 461 GLIDRIECCGLMVTVGHWVLEESCRLLAAWQ--ERGIMLPLSVNLSALQLMHPNMVADML 518 I E GL++ +G WVL+ +C + W+ L L+VN+SA + V + Sbjct: 940 HFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNVSARSFFQDDFVTQIQ 999 Query: 519 ELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQH 578 +L R+ I P L LE+TES ++ + + L+ GV+ A+DDFG GY+ LQ+ Sbjct: 1000 TVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDFGTGYSS---LQY 1056 Query: 579 MKSLPIDVLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKA 635 +K LP+D LKID+ FV + DS +++ I+ +A SLNL +IAEGVETE QR L ++ Sbjct: 1057 LKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETEQQRQLLIES 1116 Query: 636 GVGIAQGFLFARPLPIEIFEESY 658 G QG+LF +P PI FEES Sbjct: 1117 GCSQYQGYLFGKPAPIRQFEESL 1139 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 135/566 (23%), Positives = 249/566 (43%), Gaps = 19/566 (3%) Query: 110 VTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLI 169 L + Q L + L+ + + L + +S Sbjct: 828 EAALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDALGYTAQELLALTFTEISHP 887 Query: 170 LTVAISWCINRLILH-PLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQ 228 A+ + ++ +L L ++ E I + + + L + D G + + Sbjct: 888 TERALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAI-LKVVLVRDAQGQPLHYISQVV 946 Query: 229 QLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT-----TALMIITCETLR 281 + R E+ +A ++ LPN+AL M+ LE + R A++++ + + Sbjct: 947 DISDRKRMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAGQRWDYLCAVIVLDLDRFK 1006 Query: 282 DTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQV 341 L + LL + E+L+ L P LA++ G +F ++ + + A + + + Sbjct: 1007 VINDSLGHLVGDRLLSAIAERLQGCLRPSDTLARLGGDEFTILLDDIPNTAAATDIAKSI 1066 Query: 342 LTIMSERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRAISAAFTARHKGKNQIQFFDP 400 + ++ ++ SIG+A+ G AE L A +A A+ +G FD Sbjct: 1067 HQTLESSFNLDGYEVFATASIGIALSGMGYHRAEDLLRDADTAMHRAKLQGTACYVMFDT 1126 Query: 401 QQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPD 460 A +L E+++ A+E + ++ QP + + +GK+ E L+R Q P+ P Sbjct: 1127 AMSGRALAQLRLETELRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQGMISPG 1186 Query: 461 GLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG---IMLPLSVNLSALQLMHPNMVADM 517 I E GL++ +G WVL SC L WQ++ L +SVNLS Q N++ + Sbjct: 1187 AFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQI 1246 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 +++ + P TL LE+TES ++ +A A+L L+ +++ +DDFG GY+ L Sbjct: 1247 AQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSS---LS 1303 Query: 578 HMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 + PID LKID+ FV + + ++ AI+ LA +L + ++AEG+ET Q L Sbjct: 1304 RLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRG 1363 Query: 635 AGVGIAQGFLFARPLPIEIFEESYLE 660 QG+ F++PL + E+ + Sbjct: 1364 RRCEYGQGYFFSKPLNRQAAEQLMMN 1389 Score = 44.2 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 15/45 (33%), Gaps = 2/45 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQ 238 N ++L + + D G L + + +R E+ Sbjct: 659 NYRKDGSTFWNELYVSPVFDGD--GYLTHFVGIQTDITKRKQAEE 701 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 132/476 (27%), Positives = 241/476 (50%), Gaps = 19/476 (3%) Query: 197 PAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKA 254 ++ ++ ++ D + ++ + + ++ + + A ++ LPN++ Sbjct: 568 KNGDIFHGLMSAEKVRFKD----VDCILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRS 623 Query: 255 LLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPR 310 L + ++ Q A+M + + ++ L + + LL+ + +LK+ L Sbjct: 624 QLHDRFRYALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREE 683 Query: 311 MILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD 370 L+++ G +F ++ G + A + ++L +++ IE+ +L SIG+A++ D Sbjct: 684 DSLSRLGGDEFILLLPG-TDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPND 742 Query: 371 L-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWL 429 E L A +A + + +N +FF + + + L + + +AL H+F + Sbjct: 743 GQDFETLSKNADAAMYRVKQASRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFELHF 802 Query: 430 QPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAA 489 QPQV + G +V AE LLR + P+ P I E G ++ +G WVL + R L Sbjct: 803 QPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQ 862 Query: 490 WQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAV 548 W + G+ + ++VNLSA+Q HPN++A + +L + P L LE+TE+ +DDP AA+ Sbjct: 863 WLDAGLRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAI 922 Query: 549 AILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIA 605 AI+ L G+R+++DDFG GY+ L ++K ++ LKID+ FV + P D +++ Sbjct: 923 AIMNKLDEHGIRMSIDDFGTGYSS---LSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVT 979 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 AII LA SL + IAEGVET +Q +L G QG+ ++PLP + FE Sbjct: 980 AIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFEAFVRNS 1035 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 146/543 (26%), Positives = 254/543 (46%), Gaps = 28/543 (5%) Query: 137 AYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARE---- 192 + S + +F+ ++ + LL + + + R + LRN+A Sbjct: 291 GASSVPYISDAVREFMGVNPEDVMRDHGLLMRSVVPDDAAHVRRSAVASLRNLAPWQCEY 350 Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDL 250 ++P + H + D G +V + R +E A ++ L Sbjct: 351 RVSMPDGSVRWHITNAIPHREPD--GSVVSH-GFTMDITDRKRAEQEIERLAFYDALTGL 407 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ +L++ L++ VA AL+ I + +D L + LL + +L + Sbjct: 408 PNRRMLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLNDTLGHDMGDHLLSQVAARLLAC 467 Query: 307 LSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVLTIMSERLPIERIQLRPHCS 361 + +A+ G +F V+ + + A + +++L +++ + Q S Sbjct: 468 VRETDTVARFGGDEFVVMLETLRPELTEAASQAEIVAEKLLASLNQPFALGGQQHYSTPS 527 Query: 362 IGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+ +F + + ++L RA A + A+ G+N +FFDP A R E+D+ L Sbjct: 528 IGITLFGDERLSVDELLKRADLAMYQAKGAGRNTQRFFDPDMQAAVNARSNLEADLRQGL 587 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 + ++ QP V+ + +L+ E L+R + P P I E GL++ +G VL Sbjct: 588 ARGELCVYYQPVVDHRA-RLLGVEALVRWRHPVRGMISPADFIPLAEQTGLILPLGQQVL 646 Query: 481 EESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 + +C L W +++ L +SVN+SA Q P VA++L+ L P L LE+TES Sbjct: 647 QTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQGCGADPRKLKLELTES 706 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 + D +A + L+ GV ALDDFG GY+ L ++K LP+D +KID+ FV + Sbjct: 707 LLLGDVEDTIARMEQLKREGVGFALDDFGTGYSS---LSYLKRLPLDQVKIDQGFVRDVL 763 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 P D++++ I+ LAQSL+L+++AEGVET Q +L G QG+LF RP P+E + Sbjct: 764 TDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPGPVEDID 823 Query: 656 ESY 658 Sbjct: 824 AYL 826 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 150/587 (25%), Positives = 262/587 (44%), Gaps = 27/587 (4%) Query: 93 FQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFV 152 A + P +V+ + L Y + + P YL + A Sbjct: 223 IAAESWQAAQQARDPGLVSAVASDGRVKRLAFYPMYLNSQTTP--YLFMWAGIPEQQILA 280 Query: 153 MSTLSTLVTIYLLLSLILTVAISWCI--NRLILHPLRNIARELNAIPAKELVGHQLALPR 210 + L + + ++ +IL + ++ PL +A+ + + + Sbjct: 281 PANLEWKINLSVMAVVILFSVLLARFFGQYTLVKPLAALAQASHNFGQDQPWQ---LPSQ 337 Query: 211 LHQDDEIGMLVRSYNLNQQLLQ-------RHYEEQNENAMRFPVSDLPNKALLMEMLEQV 263 Q EI L ++ Q L+ + + A ++ L N+ LL++ L+ Sbjct: 338 YCQPAEIEQLSATFTTMTQRLENSRAIQLQSEQRLEHLATHDELTGLANRTLLLDRLDHA 397 Query: 264 VARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 + A+++I + + L Q + LL + ++L + ++++ G Sbjct: 398 IEEGMRQHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKRLCQHVRSTDTVSRLGGD 457 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYS 378 +FA++ + I L Q +L +S I+ + SIG+++F D + L Sbjct: 458 EFALVLGDLNNEESLIPLMQDLLKEISSPCHIDNHHIVVTASIGISLFPNDGNDSITLLR 517 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A A + ++ K F+ + A K L E D+ ALE + + QP+V + SG Sbjct: 518 NADLAMYQSKRH-KGDFTFYSSDMNQHAVKILELEKDLRQALERGELLLHYQPKVSLQSG 576 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-L 497 K+V E L+R Q P P I E GL+V +G WVLE++C+ +WQ++ + + Sbjct: 577 KIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWVLEQACQQAISWQQQQLPTI 636 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 ++VNLS+ Q H N+ + +L + P L LE+TES +DDP AV + L+ Sbjct: 637 TMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMIALKER 696 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSL 614 GV ++LDDFG GY+ L +++ P+D LKID F+ + D +++ +I+ +A L Sbjct: 697 GVLLSLDDFGTGYSS---LNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAHHL 753 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 L +AEGVET Q D+L K I QG+L++RPLP E F Sbjct: 754 GLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAEDFTSLLRSN 800 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 137/479 (28%), Positives = 237/479 (49%), Gaps = 23/479 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLP 251 N ++ ++ + + D G + ++ + + E+ A P+++LP Sbjct: 360 NRRKNGDIYPERITISEVKDKD--GKVTNYVSVFTDISESKASSEQIEHLAFYDPLTNLP 417 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL++ + Q + AL+ + + + L + ++LL E+L + Sbjct: 418 NRLLLLDRVRQAFSSSSRTGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCV 477 Query: 308 SPRMILAQISGYDFAVIANGVQ-EPWHAITLGQ----QVLTIMSERLPIERIQLRPHCSI 362 +A+ G +F V+ + A + + ++L+ + E Q + SI Sbjct: 478 RAGDTVARFGGDEFVVVLEDLDRNATEAAAIAEQIGNKILSTLHEPCQFGTHQYQSTSSI 537 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+ +F GD E L +A + + A+ G+N ++FFDP E R + ES++ A+E Sbjct: 538 GITLFSGDEHEIEDLLKQADISMYQAKKAGRNTLRFFDPAMQEKLSVRASLESELRYAIE 597 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 Q A++ Q QV+ + ++V AE L+R P+ P I E L++ VGHWV+ Sbjct: 598 KQQLALYYQVQVD-DNQRMVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVIN 656 Query: 482 ESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C LA W + L ++VN+SA Q + V + + ++I L LE+TES Sbjct: 657 TACMQLAEWAKSVEKKHLMIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTESV 716 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 ++D +A + L+ GV+++LDDFG GY+ L ++K LP+D +KID+ FV L Sbjct: 717 ILEDVDDVIAKMHALKALGVKLSLDDFGTGYSS---LSYLKKLPLDQVKIDQSFVRDLAY 773 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 P D+ M+ II LA + + +IAEGVETE + D L G + QG+LF RP+PIE + Sbjct: 774 DPNDAIMVKTIIDLANNFRINVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQLQ 832 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 695 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 141/462 (30%), Positives = 231/462 (50%), Gaps = 18/462 (3%) Query: 216 EIGMLVRSYNLNQQLLQR------HYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT 269 E L L ++ QR + + A V+ LPN+ LM L Q + + Sbjct: 404 EERRLDVERALLEETTQRMNEQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKR 463 Query: 270 T----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIA 325 A++ I + ++ L + LL + +L+ + I+A++ G +F V+ Sbjct: 464 FSSRLAVIFIDLDRFKNINDSLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVL 523 Query: 326 NGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAA 384 + A +++ +S+ +E +L SIG++++ D T ++L A A Sbjct: 524 PLINSNISAAHAVRKIQQTLSQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAM 583 Query: 385 FTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAE 444 + A+ G+N QFF + Q RL ESD+ ALE + + QPQ+++ SG++V E Sbjct: 584 YHAKSAGRNSYQFFTQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVE 643 Query: 445 VLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNL 503 LLR + P PD I E GL++++G + L+ +C LA W +G+ L ++VNL Sbjct: 644 ALLRWRHPVRGAVAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNL 703 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 SA Q N+ + + ++L + L LE+TES +DDP+ A+ LR LR GV +A+ Sbjct: 704 SARQFKQSNLPSLLADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAI 763 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++K P++ LKID+ FV G+ D+ + AA I LA +L +++A Sbjct: 764 DDFGTGYSS---LSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVA 820 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 EGVETEAQ +L I QG+ F+ PL + Sbjct: 821 EGVETEAQCRFLRGQQCDILQGYFFSEPLSAAGIASYLAANR 862 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 137/499 (27%), Positives = 240/499 (48%), Gaps = 21/499 (4%) Query: 177 CINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ 232 + + L R N E+ +++ R + G+ + + + Sbjct: 411 AFYQQMWQSLIEEGRWEGEVWNRRKNGEVYPLNVSISRCT--NSAGIPSHYVAIFHDISE 468 Query: 233 --RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 R E+ A +++LPN+ L + L VA + A++ + + + Sbjct: 469 IKRSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDS 528 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL + E+L S A++ G +F ++ +++P L +++L + Sbjct: 529 LGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQLE 588 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + + S+GV +F D E L A A + A+ GKN Q F + Sbjct: 589 LPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEAGKNGYQLFTAAMQQT 648 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 +R+ E+ + +AL ++F ++ QPQV++ S ++ AE L+R Q+PDG PD I Sbjct: 649 IMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEALIRWQKPDGQLVYPDEFIPI 708 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQER-GIMLPLSVNLSALQL-MHPNMVADMLELLTR 523 E CGL+ + HWVL+ +CR W+E+ G +SVNLS+ Q +V + +L + Sbjct: 709 AEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFAKDQELVQRVKNVLNK 768 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 + L LEVTE+ + D +A+AI+ L GV +A+DDFG GY+ L ++K+ P Sbjct: 769 TGLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGTGYSS---LSYVKNFP 825 Query: 584 IDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 LKID+ FV+ +P D ++ A+II L ++LN+++IAEGVE + Q D+L + Sbjct: 826 ARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEEQTQIDFLKQHRCQQV 885 Query: 641 QGFLFARPLPIEIFEESYL 659 QG+ + +P E F + + Sbjct: 886 QGYFYGKPCAAEFFSQQFF 904 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 694 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 125/486 (25%), Positives = 229/486 (47%), Gaps = 31/486 (6%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N L ++ + ++ G + + + + R E+ A ++ L Sbjct: 583 NKRKDGSLFWEHASISPV--RNDAGDISHFLAIKEDITDRKRYEEQLQHLATHDNLTGLA 640 Query: 252 NKALLMEMLEQVVARKQTTALMIITCET-----------LRDTAGVLKEAQREILLLTLV 300 N+ALL + LEQ + + + + L + + LL Sbjct: 641 NRALLQDRLEQSILFAKRSG-------RLVAALLLDLDRFKIINDSLGHSFGDRLLQIAA 693 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 ++L+ + +A++ G +F ++ V + +++L ++ I ++ Sbjct: 694 DRLRESVRGADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITAPFQIADREITVTA 753 Query: 361 SIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 S+G++++ D E L A A + A+ +G N + + P+ + + E+D+ A Sbjct: 754 SLGISIYPQDGEDEETLIRNADIAMYQAKEEG-NAFRLYAPEMNIVVHEAMEMETDLRRA 812 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 L+ + + QP++++ SGK+ AE L+R Q P P I E GL++ +G WV Sbjct: 813 LDRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWV 872 Query: 480 LEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 LE C + +WQ +G L P++ NLSA Q + ++A + +L + P L LE+TES Sbjct: 873 LENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLLELELTES 932 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP 598 + + A ++ L GV +ALDDFG GY+ L +++ P+D LKID+ F+ + Sbjct: 933 MIMRNVQTAAETMQELNALGVSLALDDFGTGYSS---LNYLRRFPVDCLKIDRSFISDVA 989 Query: 599 GD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D +++ +II +A SL LQ +AEGVETE Q ++L + QG+L++ PL +E F Sbjct: 990 DDPSAAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEEFT 1049 Query: 656 ESYLEE 661 +E Sbjct: 1050 AMLRQE 1055 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 128/437 (29%), Positives = 233/437 (53%), Gaps = 13/437 (2%) Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLK 288 R ++ ++ A ++ LPN+ L + L +++ R A++ + + + L Sbjct: 1045 RAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLG 1104 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 ++LL +++ L ++A++ G +F VI ++ P A + ++ +++S+ Sbjct: 1105 HEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKV 1164 Query: 349 LPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 ++ SIG++++ GD L A +A F A+ +G N QF++ AA Sbjct: 1165 FAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKEQG-NSYQFYEKGMETAAV 1223 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 KRL E+++ ALE ++ A++ QPQ+ + +G++ + E L+R P+ P I E Sbjct: 1224 KRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLAE 1283 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL+ ++G W+L E+C + +W +RG ++VN+S +L ++V ++ +L + Sbjct: 1284 ETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETGL 1343 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 P L LE+TES + AA+ R LR G++ A+DDFG GY+ L ++KS P+D+ Sbjct: 1344 PPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSS---LNYLKSFPVDI 1400 Query: 587 LKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKID+ F+ + P D+++I II LA SL L+++AEGVET+AQ ++L QGF Sbjct: 1401 LKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGF 1460 Query: 644 LFARPLPIEIFEESYLE 660 + PL E++ L Sbjct: 1461 YLSEPLSAAEIEQAILS 1477 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 136/482 (28%), Positives = 234/482 (48%), Gaps = 25/482 (5%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 + + + + L + D G +V + + +R E A P++ LP Sbjct: 655 KRMDSGQSFPADVLLSSMKLD---GRVV-LQATVRDITERKKSESEIVRLAFYDPLTGLP 710 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LLM+ L+ + + A++ I + + A ++LL+ + ++LK + Sbjct: 711 NRRLLMDRLQHALTSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCV 770 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAI-----TLGQQVLTIMSERLPIERIQLRPHCSI 362 +A++ G +F V+ + + + +++L ++ ++ + SI Sbjct: 771 REEDTVARLGGDEFVVLLDNLSHGHDNAGAHTKRVAEKILQALNLSYMLQGYEYHSSPSI 830 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GVA+F D + ++L RA SA + ++ G+N ++F+D + R E + +ALE Sbjct: 831 GVALFCADASSPDELLKRADSAMYQSKAAGRNTVRFYDERTQALLLARAELEHALHHALE 890 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 Q ++ Q QV + V AEVLLR P P I E G+++ +G+WVLE Sbjct: 891 QQQLMLYYQVQVN-ADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLE 949 Query: 482 ESCRLLAAWQERGI--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 ++C L W L L+VN+S Q + + L+T I P L LE+TES Sbjct: 950 QACDQLKRWASDVFKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESM 1009 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 + D +A ++ L+ G+ ++DDFG GY+ L +K LP+D LKID+ FV + Sbjct: 1010 LVHDVENIIATMQQLKKIGLNFSMDDFGTGYSS---LSSIKRLPLDQLKIDQSFVRDIGH 1066 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D +++ II +AQS+ L +IAEG+ETE QR LA G QG+LF++P+P+ FE Sbjct: 1067 DEHDKAIVRTIIAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSDFEG 1126 Query: 657 SY 658 Sbjct: 1127 LL 1128 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 119/471 (25%), Positives = 217/471 (46%), Gaps = 17/471 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 +AI + L++ D G++ + E+ +A+ ++ LP Sbjct: 228 HAIEWADGTRKYLSVNGAPLKDADGVITHIVFSVTDISHHKHVEEQLCHDALHDNLTRLP 287 Query: 252 NKALLMEMLEQVVARKQT-----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 N+ L ME + + + A++ + + + L + LL +L+ Sbjct: 288 NRTLFMERVNHAIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQLEKC 347 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + +A +SG +F ++ +++ A + +++ + + ++ SIG+A+ Sbjct: 348 VRTTDTVAHLSGDEFTILLEDIKDIKDATRVAERIQATLKAPFNLNNHEVFTSASIGIAL 407 Query: 367 FYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 +E + A A + A+ GK + + FD A + L E+D+ ALE +F Sbjct: 408 SSTGYERSEDILRDADIAMYRAKELGKARHEIFDKIMHARALELLRLENDLRRALERQEF 467 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QP + +G L E L+R + P+ P I E GL++ +G WVL E+CR Sbjct: 468 EVYYQPITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACR 527 Query: 486 LLAAWQERGI---MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRID 542 L W + L +SVNLS Q+ P+++ + +L + L LE+TES ++ Sbjct: 528 QLRMWHTQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILME 587 Query: 543 DPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PG 599 + +L LR +++++DDFG GY+ L ++ P++ LKID+ FV + Sbjct: 588 NAETVTKMLLQLRARNIQLSVDDFGTGYSS---LSYLHRFPVNTLKIDRSFVSKMNPKNR 644 Query: 600 DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLP 650 ++ +I II LA SL + +IAEGVET Q L QG+LF++PL Sbjct: 645 NTEIIRTIITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPLT 695 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 135/485 (27%), Positives = 236/485 (48%), Gaps = 16/485 (3%) Query: 189 IARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYE--EQNENAMRFP 246 L+ + + + D + + + + + A+ Sbjct: 153 EGEVLSRRRDGYDFWWAVTVSTVC--DSDNTVTNYVISGVDVSELKEANRKMQQMALYDS 210 Query: 247 VSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 ++ L N+ L ++ LEQ V AL+ + + + L + LL T+ ++ Sbjct: 211 LTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDTLGHDAGDSLLQTVAQR 270 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 LK+ + + +A++ G +F V+ + + + + Q+L + E + +++ ++ SI Sbjct: 271 LKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEVIVSTSI 330 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GV + D A+ L A A + A+ G+++ F+ + A K+L E ++ +AL+ Sbjct: 331 GVTLAPTDGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAHALKQLLMEQELRHALQ 390 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 +F + QPQV +T+GK+VS E L+R P +PD I E GL+ +G WVL+ Sbjct: 391 FEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLK 450 Query: 482 ESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +C + Q+ G + ++VNLSA Q P + + E L ++P L LEVTES Sbjct: 451 NACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESML 510 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP-- 598 + D A L+ LR GV +A+DDFG GY+ L ++K LP++ LK+D+ FV +P Sbjct: 511 MGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSS---LSYLKKLPVNALKVDREFVRDIPED 567 Query: 599 -GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 D + +AII +A L L+++AEGVET Q+++L AQG+ F++PL E Sbjct: 568 SNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFEDLYIY 627 Query: 658 YLEEK 662 E K Sbjct: 628 LNEHK 632 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 138/484 (28%), Positives = 243/484 (50%), Gaps = 23/484 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLP 251 N + ++ L + + D G++ + + E+ N A P++ LP Sbjct: 299 NRSKSGDIYAKNLTITAV--RDGKGVVSNYVATFRDITTSKAASEKINNLAYFDPLTQLP 356 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ +L++ L V+ Q AL+ + + + L ++LL + +L + Sbjct: 357 NRRMLLDSLRHVLTISARSNQHCALLFLDLDNFKTLNDTLGHDVGDLLLQQVATRLTDCV 416 Query: 308 SPRMILAQISGYDFAVIANG-----VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 I+A++ G +F V+ ++ A + ++++ +++ + + SI Sbjct: 417 REGDIVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSI 476 Query: 363 GVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GV +F G+ T E+L +A A + ++ G+N FF+ E+ R E D+ A+E Sbjct: 477 GVTIFSGNETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIARADMERDLRKAIE 536 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 ++QF + Q QV +SG+ + AE L+R Q P+ P I E GL++ +G WVL+ Sbjct: 537 DNQFQLHYQAQVS-SSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLD 595 Query: 482 ESCRLLAAWQERGI--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C L AWQ+ + L L+VN+SA QL + V + L R+ I P L LE+TES Sbjct: 596 SACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKLELTESM 655 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 +++ + + L G+ +LDDFG GY+ LQ++K LP++ +KID+ FV L Sbjct: 656 LVENISDIITKMNILSKIGISFSLDDFGTGYSS---LQYLKKLPLNQIKIDQSFVRDLIT 712 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D +++ II ++ SL++ +IAEGVET +R +L G QG+LF++P+PI FE Sbjct: 713 DASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINEFEV 772 Query: 657 SYLE 660 + Sbjct: 773 LLKK 776 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 136/460 (29%), Positives = 227/460 (49%), Gaps = 14/460 (3%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT-- 269 + G + + +R E + A ++ LPN+ LL + + Q++++ + Sbjct: 212 GNTDGSIGGIVGTILDITERKRAEEAIQQLAYFDALTGLPNRTLLRDRVSQLLSQARREG 271 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 ++ + + + L A ++LL T+ ++ S + +A++ +F VI G Sbjct: 272 GGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRESDTVARLGSDEFVVILPG 331 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFT 386 V + + ++++ ++ + I+ + SIG+A++ D + A+ L A A Sbjct: 332 VGHEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTDGSSADILLKNADMAMHK 391 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ G + QF+ + A +RLT E+ + ALE +F + QP + + SG++V E L Sbjct: 392 AKEFGGDGYQFYSSELNHRAMERLTLETSLRRALERREFLLHYQPLLGIGSGRIVGVEAL 451 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSA 505 LR P+ P I E GL+V +G WVL +C L A E G L +SVN+SA Sbjct: 452 LRWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSA 511 Query: 506 LQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDD 565 Q H A + +L + P L LE+TES ++ A ILR L+ GV +A+DD Sbjct: 512 RQFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDD 571 Query: 566 FGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEG 622 FG GY+ L ++K PID LKID+ FV+ + ++++ AI+ LA LNL ++AEG Sbjct: 572 FGTGYSS---LSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEG 628 Query: 623 VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 VET Q +LA + QG+ ARPLP E + Sbjct: 629 VETAEQLAFLAALRCDVVQGYHIARPLPPRNLLEFLEARQ 668 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 133/498 (26%), Positives = 242/498 (48%), Gaps = 17/498 (3%) Query: 178 INRLILHPLRNIARELNAIPAKELVGHQLALPRLHQ--DDEIGMLVRSYNLNQQLLQRH- 234 + I L A I + H + L ++ L ++ + + Sbjct: 601 FYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQLTHYVSVYSDISKLKA 660 Query: 235 -YEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKE 289 + A P++ LPN+ LL L + AL+++ + +D Sbjct: 661 SEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNHHRIALLMLDLDRFKDVNDSFGH 720 Query: 290 AQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERL 349 + LL + +L+ + + ++ G +F V+ G + +L ++ + Sbjct: 721 QIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIEGNPALHDVEHFAEDILQLLKDPF 780 Query: 350 PI-ERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + ++ SIG++++ T ++L +A +A + A+ G++ ++F + AA+ Sbjct: 781 SLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMYRAKAHGRSCFRYFSDELTRAAE 840 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +RL E + AL ++ ++ QPQ++++S +++ AE L+R Q P P I E Sbjct: 841 QRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALVRWQDPAHGLISPAQFIPVAE 900 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRI 526 GL+ +G WVL E+CR WQ++G+ + L+VN+S +Q + N++ + L + Sbjct: 901 ETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRNSNILESVFNALKQTGY 960 Query: 527 QPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDV 586 L LE+TES + + AV IL LR G+R+A+DDFG GY+ L ++K P+DV Sbjct: 961 PASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYSS---LAYLKRFPLDV 1017 Query: 587 LKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGF 643 LKIDK FV+ +P D + AAI+ +A +L L+++AEGVETE Q +L + G QG+ Sbjct: 1018 LKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGY 1077 Query: 644 LFARPLPIEIFEESYLEE 661 L + P+P + FE+ + Sbjct: 1078 LMSPPVPADQFEQLLRAQ 1095 >UniRef50_P37649 Protein yhjK n=86 Tax=Enterobacteriaceae RepID=YHJK_ECOLI Length = 649 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 649/649 (100%), Positives = 649/649 (100%) Query: 14 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL 73 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL Sbjct: 1 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL 60 Query: 74 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP 133 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP Sbjct: 61 ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP 120 Query: 134 QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL 193 QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL Sbjct: 121 QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL 180 Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK 253 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK Sbjct: 181 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK 240 Query: 254 ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL 313 ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL Sbjct: 241 ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL 300 Query: 314 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA 373 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA Sbjct: 301 AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA 360 Query: 374 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 433 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV Sbjct: 361 EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV 420 Query: 434 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 493 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER Sbjct: 421 EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER 480 Query: 494 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP 553 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP Sbjct: 481 GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP 540 Query: 554 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQS 613 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQS Sbjct: 541 LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQS 600 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK Sbjct: 601 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 649 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 131/477 (27%), Positives = 214/477 (44%), Gaps = 25/477 (5%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPN 252 + ++ R+ + + + Q+ EE A P++ LPN Sbjct: 418 RHANGAIRPISVSASRIPHTEHD----TFVVTLRDITQQRQDEEEIRRLAFYDPLTGLPN 473 Query: 253 KALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + LLM+ + Q + Q ALM + + + L + LL + +L++ + Sbjct: 474 RRLLMDRVRQAMVNSARLGQHGALMFLDLDHFKLLNDTLGHDVGDELLQQVAYRLRNCVR 533 Query: 309 PRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIG 363 +A++ G +F V+ G+ + A + ++L ++ + SIG Sbjct: 534 EGDSVARLGGDEFVVLLEGLSDNRTDAANQAEVVAHKILDALALPYSLRGHGYNSTPSIG 593 Query: 364 VAMF-YGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALEN 422 + +F T + L +A A + A+ G+N +FFDP A +I L+ Sbjct: 594 IVVFMEDHETMDDLLKKADVAMYQAKAAGRNTARFFDPVMQAAVTTHAELAKEIRLGLQR 653 Query: 423 HQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEE 482 H+F + Q Q++ G+ AE L+R P I E G+++ +G WV+E Sbjct: 654 HEFVLHYQVQIDSQ-GRCTGAEALVRWNHRVRGLVSPAHFIPLAEETGMILPLGEWVMES 712 Query: 483 SCRLLAAWQERGI--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +C+ L W + L+VN+SA QL P VA + E L R G L LE+TES Sbjct: 713 ACQQLVEWSRNPMTAHWTLAVNVSASQLAQPEFVASVREALQRSGAPAGQLKLELTESML 772 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL--- 597 +DD + + ++ GV +LDDFG GY+ L ++K LP+ LKID+ FV + Sbjct: 773 VDDVEDIIVKMMAIKELGVSFSLDDFGTGYSS---LSYLKRLPLSQLKIDQSFVRDVLTD 829 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 P D+ + ++ L SL L +IAEGVET QRD LA QG+ F RP P + Sbjct: 830 PSDAVIARTVVALGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYFGRPAPADAL 886 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 131/444 (29%), Positives = 240/444 (54%), Gaps = 11/444 (2%) Query: 225 NLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCE 278 + + + +R ++ A P++ LPN+ L+ + L+ +A+ + L+++ + Sbjct: 473 AIIRDISERKAAEDQLVHQAYHDPLTGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLD 532 Query: 279 TLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLG 338 ++ L A + +L TL ++++ L +A+ G +F V+ ++E ++L Sbjct: 533 RFKNINDTLGHAVGDRILTTLAQRMQETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLA 592 Query: 339 QQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQF 397 Q++ ++S+ + I+ ++ S+G+++ D +QL A +A + A+ KG+N QF Sbjct: 593 QKLSDLVSQPVLIDGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGRNNFQF 652 Query: 398 FDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWD 457 + P A +RL E+++ AL+ + ++ QPQVEM SG+++ +E LLR P+ Sbjct: 653 YTPDMNAHAGRRLQLENNLRKALQRQEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLI 712 Query: 458 LPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADM 517 P+ I E G++ +G W LE++C+ AWQ+ L ++VNLSA Q + N+V D+ Sbjct: 713 SPNDFIPLAEETGVIEEIGAWALEQACQQTVAWQKNHPELKIAVNLSARQFRNENLVDDI 772 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 ++L + + L +E+TES ++D A+ ++ L G+ +A+DDFG GY+ L Sbjct: 773 EQILNKTGLAARHLEMELTESLLMEDVDVAIDLMNRLTKLGITLAIDDFGTGYSS---LS 829 Query: 578 HMKSLPIDVLKIDKMFVEGLP-GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAG 636 H+ PID LKID+ FV + ++ + II L ++L L +IAEGVE QR L + G Sbjct: 830 HLNRFPIDKLKIDRSFVNSMSLDNNGIARTIITLGRTLGLSIIAEGVENNEQRQLLLQLG 889 Query: 637 VGIAQGFLFARPLPIEIFEESYLE 660 AQG+ F+RP+ F E + Sbjct: 890 CPQAQGYYFSRPVHDNAFSEMLEK 913 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 137/500 (27%), Positives = 236/500 (47%), Gaps = 17/500 (3%) Query: 175 SWCINRLILHPLRNIARELNAIPAKELVGHQLAL--PRLHQDDEIGMLVRSYNLNQQLLQ 232 R L I + GH G ++ + + Sbjct: 463 DGAFYRRFWRALETEGHWSGEIWNRHRDGHIFPAWQSVSAVKGPDGSTTHYVSIFTDISE 522 Query: 233 --RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 R + + ++ LPN+A L+Q++ AL+++ + + Sbjct: 523 FKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVLDLDRFKTINDS 582 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + + LL + E+++ +A+ G +F VI + A + +++ ++ Sbjct: 583 LGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILAD-SDAVRAARVANAMISAIA 641 Query: 347 ERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + L S+G++++ D +E L A +A + A+ G+N QFF + Sbjct: 642 KPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAKSLGRNTYQFFSAEMSAV 701 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 A +RL E+ + AL N +F ++ QPQ+E+ S +L+ E L+R + P+ W P I Sbjct: 702 ATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPL 761 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRY 524 E G++ +G WVLEE+CR WQ G+ + P++VNLS LQL + + LL+ Sbjct: 762 AEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLSGC 821 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 R+ PG L LE+TE+ + D +LR L+ G R ++DDFG GY+ L ++ P+ Sbjct: 822 RLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSS---LGYLNRFPV 878 Query: 585 DVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 D LKID+ F+ + +++ AII LA+ L+L+++AEGVET Q ++L +AG AQ Sbjct: 879 DKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQ 938 Query: 642 GFLFARPLPIEIFEESYLEE 661 GF F+RP+P + E Sbjct: 939 GFYFSRPVPADEIAGWLSRE 958 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 143/480 (29%), Positives = 252/480 (52%), Gaps = 21/480 (4%) Query: 200 ELVGHQLALPRLHQDDEIGMLVRS-------YNLNQQLLQRHYEEQN--ENAMRFPVSDL 250 E +AL R H+D E+ + R+ +L ++ +R E+ A+ ++ L Sbjct: 453 ERKAADVALARAHEDLELRVKERTKELAKANMDLLVEINERKMAEERVKHMALHDALTGL 512 Query: 251 PNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ LL E LE ++ + A++ I + + L + + LL+ + +L V Sbjct: 513 PNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVNDTLGHHEGDQLLVEVANRLHQV 572 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + +A++ G +F ++ N + + + + + + + SIGVA+ Sbjct: 573 IGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFKPAVKLALQDMFVTPSIGVAI 632 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D T QL A +A + A+ G+N Q+F+ ++ ++R++ E+ + AL+ QF Sbjct: 633 YPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNRSLDDSLKERISLENALNQALKLGQF 692 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QPQ+++ S +++ AE L+R P+ PD I E GL+V +G WVL ++ Sbjct: 693 ELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASS 752 Query: 486 LLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 LA W+++G L +SVNLSALQ+ + ++ +++ Y + L LE+TES + + Sbjct: 753 QLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLELTESMIMRNA 812 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 +A L + N G+++++DDFG GY+ L ++K P+D LKID+ FV+ + D+ Sbjct: 813 EETIAALDKIHNLGIQISVDDFGTGYSS---LSYLKRFPLDKLKIDRSFVQDITVDTDDA 869 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + II +A +LNLQ+IAEGVET AQ + L G QG+LFA+PLP+E E L Sbjct: 870 MICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEHLLAS 929 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 130/479 (27%), Positives = 233/479 (48%), Gaps = 16/479 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N EL ++ + DE G + + + + Q+ E A ++DLP Sbjct: 618 NKKKNGELFWEHASICPM--RDEEGYITHFIAVKEDITQQKHNEEILAHQANYDALTDLP 675 Query: 252 NKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L+ + L Q + Q A+M I + ++ L + LL +L+ + Sbjct: 676 NRTLIFDRLRQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCI 735 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 + ++ G +F +I + + A + QVL ++ E + + SIG+A + Sbjct: 736 RKTDTVGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGIASY 795 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D L A +A + A+ +G+N FF + AQ R+ E+ + +A+ ++ + Sbjct: 796 PQDGKNVSTLVRNADTAMYAAKQEGRNVFAFFTQNMNDEAQSRIIIENQLRHAISRNELS 855 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP + + + ++V AE L+R P+ PD I E L+V +G W+L ++C+ Sbjct: 856 VVYQPFIHLNTSQIVGAEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQACQE 915 Query: 487 LAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 +A W ++G L ++VN+S QL PN+V ++E + + L LE+TE +++ Sbjct: 916 VANWHQQGNNGLWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVEEVP 975 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---S 602 ++++ L + +R+A+DDFG GY+ L ++K P VLKIDK F+ LP D + Sbjct: 976 GVQSLIKQLNHLKIRLAIDDFGTGYSS---LSYLKRFPFSVLKIDKSFISDLPDDQDAIA 1032 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ++ +I +A L L ++AEG+ET AQ D+L G QG+LF++PLP F Sbjct: 1033 LVKTMITMAHGLGLVVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPAQFRAYLQRN 1091 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 132/486 (27%), Positives = 235/486 (48%), Gaps = 23/486 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLP 251 + E+ L + + D G+ + + R + E+ A ++ LP Sbjct: 355 DKRKNGEVYPKWLTITAV--KDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTKLP 412 Query: 252 NKALLMEMLEQV----VARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L++ + Q AL+ + + + L ++ L+ + ++++ + Sbjct: 413 NRRHLLDRINQARSISARSNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCV 472 Query: 308 SPRMILAQISGYDFAVIANGVQEPWH-----AITLGQQVLTIMSERLPIERIQLRPHCSI 362 +A+I G +F V+ + + +++ ++E ++ + SI Sbjct: 473 RDMDTVARIGGDEFVVLIEEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSI 532 Query: 363 GVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GV ++ G+ + L A A + A+ G+N ++FFDP A + R E+D+ +A+ Sbjct: 533 GVCLYLGNEESVDTLLRHADLAMYQAKESGRNGVRFFDPAMQLAVETRAALEADMRHAVT 592 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 Q ++ Q Q+ + + + AE L+R P P I E L++ +GHWVLE Sbjct: 593 GKQLRLYYQIQL-TSDHRPLGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLE 651 Query: 482 ESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C+ L W ER L L++N+SA Q + V + LL +++ P L LE+TES Sbjct: 652 TACKQLVLWSKHERTRNLILAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESV 711 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 + D V+ + L+ GV++ALDDFG GY+ L ++K LP+D +KID+ FV + Sbjct: 712 VLSDVADVVSKMHALKALGVKLALDDFGTGYSS---LSYLKQLPLDQIKIDRSFVSDVTT 768 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 P D+ M+ II LA + + +IAEGVETE Q ++L + G QGFLF +P+PI+ FE Sbjct: 769 DPSDAVMVQTIINLAHNFRMNVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDEFEA 828 Query: 657 SYLEEK 662 + + Sbjct: 829 LLGQTQ 834 >UniRef50_B4SWG2 Protein YhjK n=42 Tax=Enterobacteriaceae RepID=B4SWG2_SALNS Length = 668 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 559/662 (84%), Positives = 619/662 (93%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 MRVSRSLTIKQMAMVAAVV++FVF+FCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA Sbjct: 1 MRVSRSLTIKQMAMVAAVVMMFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 ILK D+P AE IL SIKPAGVVSRADVVLPNQFQALRK FIPERPVPVMVTRLFELPVQI Sbjct: 61 ILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQI 120 Query: 121 SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR 180 SL VYSLERPANPQP+AYLVLQADS+RMYKFVMS LSTLVTIYLLLSLILTVAI+WC+NR Sbjct: 121 SLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNR 180 Query: 181 LILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE 240 LI+HPLR IARELN IP +EL+GHQLALPRLHQDDEIGMLVRSYNLNQQL+QR EEQ + Sbjct: 181 LIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD 240 Query: 241 NAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV 300 NAMRFPVS+LPNKA LM +LEQV+ R+QTTAL+I+TCETLRDTAGVL+E QREILLLTLV Sbjct: 241 NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLV 300 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 EKLKSVL+PRM+L Q+SGYDFA+IA+GV+EPWHAITLGQQ+LTI++ERLPI+ IQLRP C Sbjct: 301 EKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSC 360 Query: 361 SIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 SIG+AM+YGDLTAE+LY RA+SAAFTAR KGKNQIQFFDP QMEAAQ+RLTEESDIL AL Sbjct: 361 SIGIAMYYGDLTAEELYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTAL 420 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 +NHQFAIWLQPQVEM SG ++SAE LLR+QQPDGSW+LPDGLI+RIE CGLMVTVG+WVL Sbjct: 421 DNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPDGLIERIESCGLMVTVGYWVL 480 Query: 481 EESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 EESCR LAAWQERG+ LPLSVNLSALQLMHP MV+++LELL RYRIQPGTLILEVTESRR Sbjct: 481 EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRR 540 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD 600 IDDPHAAVAILRPLRNAGVR+ALDDFGMGYAGLRQLQHMKSLP+D+LKIDKMFV+GLP D Sbjct: 541 IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDD 600 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 SM+ AII++A+SLNLQ+IAEGVE EAQR WL +AGV +AQGFLFARP+P +IFEE YL Sbjct: 601 HSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLS 660 Query: 661 EK 662 + Sbjct: 661 HE 662 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 133/458 (29%), Positives = 229/458 (50%), Gaps = 17/458 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 DE G +R +N + +R E+ NA ++ LPN+ L M+ LE + R++ Sbjct: 680 DEQGKSLRIDGINSDITERKQAEEQLQYNATHDTLTQLPNRLLFMDRLEHALERRRRYSD 739 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + + L A + LL + +L+ L LA++ G +F ++ Sbjct: 740 PLFAVLFLDLDEFKVINDSLGHALGDELLREIARRLQKSLRADDTLARLGGDEFTILLEE 799 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFT 386 + + AI + +++ ++ +E ++ + SIG+A+ G+ A ++ A +A + Sbjct: 800 IHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNTSIGIALSNGEYEAASEILRDADTAMYR 859 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ GK FD Q +A RL E+D+ A+E +F ++ QP + + L E L Sbjct: 860 AKAGGKACYAIFDQQMHASAVSRLQLETDLRRAIERQEFLVYYQPIISLQHDTLTGFEAL 919 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM---LPLSVNL 503 +R Q P P I E GL+V +G W+LE++ + L WQ + L +SVNL Sbjct: 920 IRWQHPQQGLVPPARFIPIAEETGLIVPIGEWILEQAAQQLKIWQTQYRNYESLKMSVNL 979 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S+ QL +++ + +L++ I L +E+TES +++ A +L LR + + L Sbjct: 980 SSKQLRDASLLGTIDRILSKTEIDNNALKVEITESILMENVQVAADVLIALRERNIEICL 1039 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-PGD--SSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++ P++ LKID+ FV + P D S ++ AI+ LA L +++IA Sbjct: 1040 DDFGTGYSS---LSYLHRFPVNTLKIDRSFVMRMRPNDENSEIVRAIVSLAHILGMEIIA 1096 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 EG+ETE Q L G QG+ FA+PL E Sbjct: 1097 EGIETELQLAQLKWIGCEQGQGYFFAKPLATSEVEALL 1134 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 147/581 (25%), Positives = 258/581 (44%), Gaps = 20/581 (3%) Query: 97 RKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQ-----ADSFRMYKF 151 + V L V++ +L + + Sbjct: 512 GNRRRIQALVEHRTAELQAASVRLHENRAALIDAQRIARLGSWETLCARDGLHASDELHL 571 Query: 152 VMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRL 211 ++ + + + L + A + + R + L L R+ Sbjct: 572 LLDSTAGDLNSLADLIDAIAPASRAALTDALERAATEPGRIMLDCNTDSLPMRTL-QFRI 630 Query: 212 HQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLPNKALLMEM----LEQVVA 265 + G L R Q + + A P++ L N++ + L Sbjct: 631 EGEHVGGRLRRIRGTAQDVTALREAEARIRYLARFDPLTGLLNRSAWQDHAQDVLRHAAR 690 Query: 266 RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIA 325 A++ + + + L A + LL + +L + ++A+I G +F ++ Sbjct: 691 HDDRCAVLFLDLDDFKTVNDSLGHAAGDRLLAQVACRLGGCVRAEDLVARIGGDEFVILL 750 Query: 326 NGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAA 384 + + + ++VL ++ L I+ LR SIG+A++ D + L A +A Sbjct: 751 SRLAHAEEPARVAERVLDALARPLQIDSQPLRVGASIGIALYPADGGEIDTLLKHADTAM 810 Query: 385 FTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAE 444 + A+ G+N +FF P+ + +RL E+++ A+E+ + QPQ++ SG++ E Sbjct: 811 YEAKESGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCE 870 Query: 445 VLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNL 503 L+R Q P+ PD + E GL+V +G WVL E+C W++ G+ L ++VN+ Sbjct: 871 ALVRWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNI 930 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 SALQ + VA + +L P + LE+TES +D VA L G+ +AL Sbjct: 931 SALQFRRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQLVALGLTLAL 990 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIA 620 DDFG GY+ L ++K LP+ LKID+ FV+GLP D+++ +A + LA+ L ++++A Sbjct: 991 DDFGTGYSS---LSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVA 1047 Query: 621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 EGVETE QR +L K G QG+LF+RPL +E F + E+ Sbjct: 1048 EGVETEDQRGYLCKRGCRAMQGYLFSRPLGVEEFGTWFEEQ 1088 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 146/484 (30%), Positives = 230/484 (47%), Gaps = 23/484 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N ++ L + + D G++ + + EE A ++ LP Sbjct: 529 NRRKNGDVFPEWLTISSVRDGD--GVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLP 586 Query: 252 NKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL + L +A + AL+ I + + L + LL + ++L S + Sbjct: 587 NRRLLHDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSV 646 Query: 308 SPRMILAQISGYDFAVIANGVQE-PWHAI----TLGQQVLTIMSERLPIERIQLRPHCSI 362 +A++ G +F V+ + E P A +G++++ +++ + S+ Sbjct: 647 REGDTVARLGGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSV 706 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G+ +F G ++L RA A + A+ G+N ++FFDP+ R E D+ A+ Sbjct: 707 GITLFGGQQVGIDELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVG 766 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 F + QPQV+ SG+++ AE LLR Q P I E GL++ +G WVLE Sbjct: 767 RQSFFLAYQPQVD-ASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLE 825 Query: 482 ESCRLLAAWQERG--IMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C A W R +SVN+SA Q N V +L +L R P L LE+TES Sbjct: 826 TACAQAALWAARPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESM 885 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 +D+ +A + L+ GV +LDDFG GY+ L ++K LP+D LKID+ FV L Sbjct: 886 LLDNVQDIIAKMSALKARGVGFSLDDFGTGYSS---LSYLKQLPLDQLKIDQSFVRDLLT 942 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 P D + II LA++L L +IAEGVE+ Q+D LA G QG+LF+RPL + FE Sbjct: 943 DPNDEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADFEA 1002 Query: 657 SYLE 660 Sbjct: 1003 FLRR 1006 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 142/484 (29%), Positives = 234/484 (48%), Gaps = 23/484 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLP 251 N E+ L + + D + + + + E + A P++ LP Sbjct: 536 NRRKDGEIYPEYLLISAV--KDIKNEVANYVATFRDITANKAAESEIKKLAFYDPLTLLP 593 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL + L +A AL+ I + + L + LL + +LKS + Sbjct: 594 NRRLLTDRLNHALASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCI 653 Query: 308 SPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 LA++ G +F VI + E A +G+++L +++ P+ + SI Sbjct: 654 REDDTLARLGGDEFVVILENLSELAMDAATKAELIGEKILAALNQVYPLASQEYHGAASI 713 Query: 363 GVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 GV +F G + ++L +A A + ++ G+N ++FFD + +R E ++ A++ Sbjct: 714 GVTLFAGHALSIDELMKQADIAMYQSKKSGRNTLRFFDLDTQKIINERAELEIELRKAVD 773 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 Q + Q Q+ G +SAE L+R P P I E GL++ +G WVL+ Sbjct: 774 KKQLHLHYQIQLNSV-GTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLD 832 Query: 482 ESCRLLAAWQERGI--MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 +C L +WQ+ L L+VN+SA Q N VA + E + R+ I P L LE+TES Sbjct: 833 TACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESM 892 Query: 540 RIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL-- 597 +++ + + LR G++ +LDDFG GY+ LQ++K LP++ LKID+ FV L Sbjct: 893 LVENIEDIIVTMNALREMGIQFSLDDFGTGYSS---LQYLKRLPLNQLKIDQSFVRELSS 949 Query: 598 -PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 D +++ I+ +A+SLNL +IAEGVETE Q L G QG+LF +P+PIE + Sbjct: 950 SSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIEQLDA 1009 Query: 657 SYLE 660 Sbjct: 1010 ILAR 1013 >UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR44_RHORT Length = 678 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 170/675 (25%), Positives = 314/675 (46%), Gaps = 22/675 (3%) Query: 3 VSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAIL 62 + + L ++Q V+ + L F + L + + A S++ LS+A+ Sbjct: 2 LGKFLAVQQALRVSLLSLAVSLGFLGMQTVWLASAADRDYLILRDRTASSLQSGLSNALW 61 Query: 63 KGDIPEAEAILASIKPAGVVSRADVVLPN-QFQALRKSFIPERPVPVMVTRL-------- 113 D A+AI++ A + V+ N + A +S P + + L Sbjct: 62 NFDAETAKAIISDALRANPIRSIHVIDSNGRVFADGQSAQPVVAPSLWESYLGWLVDLKS 121 Query: 114 -FELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTV 172 L ++ S + + ++ + D + + L+ V L++ L++ + Sbjct: 122 EMTLDLRFSSPTDDHYQG---MVVGFVFITFDKDHFIRGIADRLADQVLGILVIVLVVAL 178 Query: 173 AISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ 232 S + I P+ +AR + + ++ L +PR HQ +EIG + N L Sbjct: 179 TTSIVFHLFISRPIIRVARGVADVDPEDPAATVLTVPRAHQRNEIGRMTNRLNHLLGRLA 238 Query: 233 RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVAR----KQTTALMIITCETLRDTAGVLK 288 E A R P++DLPN++L++EM++ + R A+M + + + L Sbjct: 239 EVQGELRLLATRDPLTDLPNRSLILEMMDATINRVALDGGRCAVMFLDLDMFKHVNDSLG 298 Query: 289 EAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSER 348 +++L + + +V++ + ++ G +F V+ + + + ++++T + Sbjct: 299 HEAGDLILKDIGRRFDAVVAGLGAVGRLGGDEFVVLIDRYEREDDLARIARRLITTVKRP 358 Query: 349 LPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + ++ + S+G+A + D T + L A +A + + G Q FFD E A Sbjct: 359 IEVDGTLVHSSTSVGIACYPVDGATPQGLLRNADTAMYAVKASGPGQWAFFDRSMTENAL 418 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 RL E+ + +A+E QF + QP++++ S ++ E L+R +G P I E Sbjct: 419 VRLRTEASLRSAIEKGQFVLHYQPKLDLRSNRISGCEALIRW-DLNGDLVPPGRFISIAE 477 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 G++ +G WVL E+C+ W+ +P+++N+S QL + D L+++ Sbjct: 478 ETGMIYDIGLWVLREACQAQRRWRRHAGAVPIAINVSVRQLKDERFIDDFLDIIQASGAD 537 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 P L +EVTES + + +LR +R+ GVR+++DDFG GY+ L ++K+LPID+L Sbjct: 538 PELLEVEVTESALMSSIEVSAHLLREMRSHGVRLSIDDFGTGYSS---LAYLKNLPIDIL 594 Query: 588 KIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFAR 647 KID+ FV LP +SS+ II LA + L+ +AEG+ETE Q WL G + QGFL + Sbjct: 595 KIDRSFVSDLPEESSIPRMIIGLAGQMGLRTVAEGIETEGQLAWLRDNGCDMIQGFLIEK 654 Query: 648 PLPIEIFEESYLEEK 662 PLP F + Sbjct: 655 PLPEADFLRFVDAYR 669 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 159/667 (23%), Positives = 290/667 (43%), Gaps = 28/667 (4%) Query: 9 IKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPE 68 +++ + A + +F+ ++L+ + A + LS + Sbjct: 163 RRRVGFILATQFLIIFVVSILILWIFRHLVTRHLADMADYTRDLSLRNLSRPLELDRPDT 222 Query: 69 -AEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSL 127 A +++ L + + E + + + P + + Sbjct: 223 PAYQRDELGMVTEAINQMRERLIDDV---TRRERDEAEIRKFSKAIDQSPSSVLICDRQW 279 Query: 128 ERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLR 187 + + L + S + K S + V + L W RL + + Sbjct: 280 RIEYANRKFSQLTGNSPSEIIGKHPSSLIDPGVDSHEARQL-------WKSIRLQVQRVG 332 Query: 188 NIARELNA-IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMR 244 E+N+ E QL + + D G L + + +R+ ++ A Sbjct: 333 VWQGEVNSTRKNGERYWEQLVVTPI--KDNNGESTGYLILGEDISIRKRYEQQLLRQANY 390 Query: 245 FPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLV 300 ++ LPN+ L ++ L+ +A+ + +M + + + L + LL+ Sbjct: 391 DILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHINDTLGHDAGDTLLIEAA 450 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 ++ S L +A++ G +F V+ G+ P + + +++L + + ++ Sbjct: 451 RRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERILKTFAPPFMLSGQEVFVTT 510 Query: 361 SIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 SIG+A F D + L A +A + A+HKGK+ F P+ E + +RL ES + A Sbjct: 511 SIGIATFPDDSDNSGTLLQHADAAMYEAKHKGKSAYARFTPEMSEVSHERLQMESHMRKA 570 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 LE +F ++ QP V+ SG LV+AE LLR P +PD I E GL++ +G WV Sbjct: 571 LELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFIPLAEETGLIIPIGEWV 630 Query: 480 LEESCRLLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 ++E+C+ WQ G + ++VN+S Q P ++ L ++P L LE+TE Sbjct: 631 VKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALNDSNLRPELLELEITER 690 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 +D+ IL+ L G+R+++DDFG GY+ L ++KS P D LKIDK FV+ + Sbjct: 691 LILDNSIETADILKQLDKVGIRLSVDDFGTGYS---ALSYLKSYPFDTLKIDKSFVQDVL 747 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D+S++ AII +A SL L+++AEGVE E +L +QG+ ++RPLP + F Sbjct: 748 KENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQGYFYSRPLPEQDFI 807 Query: 656 ESYLEEK 662 + Sbjct: 808 HWLETNE 814 Score = 110 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 87/248 (35%), Gaps = 21/248 (8%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 R + L+ + +A + F + + ++ +++ +++ I R L+ + Sbjct: 24 FRAASPLSFRLVAWILLFSSAFTLLASGIQIYSDYREDLSKIEQRMQVIESGYRSSLAQS 83 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI 120 + D + + I + LR P+ + + L + Sbjct: 84 LWALDQKHLQTQMDGILSLPDIE-----------HLRLRIEPDSELVM--GELPRDTDTL 130 Query: 121 SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR 180 + + R + L + A R+Y + + ++ L+ ++++ I W Sbjct: 131 THSFELIYRDDAEFRLGELTITASLHRVYDELRRRVGFILATQFLIIFVVSILILWIFRH 190 Query: 181 LILHPLRNIA---RELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQ-----QLLQ 232 L+ L ++A R+L+ + +Q DE+GM+ + N + + + Sbjct: 191 LVTRHLADMADYTRDLSLRNLSRPLELDRPDTPAYQRDELGMVTEAINQMRERLIDDVTR 250 Query: 233 RHYEEQNE 240 R +E Sbjct: 251 RERDEAEI 258 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 131/442 (29%), Positives = 234/442 (52%), Gaps = 13/442 (2%) Query: 220 LVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMII 275 L + E A P+++LPN++L ++ L Q + ++ Sbjct: 566 LANILATAID-RKTTEERLTYLAQFDPLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFA 624 Query: 276 TCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAI 335 + + + + + LL+ + ++L+ + +A++ G +FA+I + + +P A Sbjct: 625 DLDRFKIVNDTMGHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDAT 684 Query: 336 TLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQ 394 + ++V++ + +E ++ S+G++++ GD A+ L A +A F A+ +G Sbjct: 685 LIAEKVISALQVPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQGPAI 744 Query: 395 IQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDG 454 QF+ PQ E A RL E+ + AL +F + QP+ + +G++ E LLR Q P Sbjct: 745 YQFYLPQMNERAVARLKIETQLRGALARREFVLHYQPKASLINGEITGFEALLRWQHPAH 804 Query: 455 SWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNM 513 P I +E GL+V VG WV++ C + WQ +G++L P+++NLSA Q ++ Sbjct: 805 GLVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSARQFQQQDL 864 Query: 514 VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGL 573 + + E L I P L E+TES + + A L+ L+ GV++++DDFG GY+ Sbjct: 865 DSIIGETLRATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYSS- 923 Query: 574 RQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRD 630 L ++K P+DVLKID+ F+ + P D+++ A+I LA SL L+++AEGVET AQ + Sbjct: 924 --LAYLKRFPLDVLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLE 981 Query: 631 WLAKAGVGIAQGFLFARPLPIE 652 +L + G QG+ F++PLP+E Sbjct: 982 FLIRHGCDEMQGYYFSQPLPLE 1003 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 130/455 (28%), Positives = 226/455 (49%), Gaps = 16/455 (3%) Query: 219 MLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTAL 272 + + + + + + + N A ++ LPN+ + + L+QV+ Q + Sbjct: 353 QITGVFMIVRDITNKKEYEAKINYLAFHDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVYV 412 Query: 273 MIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPW 332 + + + + L ++LL +L+ + + + ++ G +F VI V E Sbjct: 413 LFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGKKGTVYRLGGDEFMVILTDVTE-R 471 Query: 333 HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKG 391 ++ ++ + + I +L SIG++ + D L A +A + A+ KG Sbjct: 472 EVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAKDKG 531 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 KN + P +A ++ ++++ AL +F + QPQV SG +V E L+R Sbjct: 532 KNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDH 591 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMH 510 P+ LPD I E GL+V +G WVL +C+ WQ++G+ L ++VNLSA Q + Sbjct: 592 PERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLK 651 Query: 511 PNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGY 570 + + E+L + R+ P L LE+TES I D H A L+ L+ GV VA+DDFG GY Sbjct: 652 QDFTQMIAEILHQTRLAPEYLELEITESSMI-DVHRATQALKELKQLGVHVAIDDFGTGY 710 Query: 571 AGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEA 627 + L ++K P++ LKID+ FV + P + ++++ II +A L + +IAEGVET+ Sbjct: 711 SS---LYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKE 767 Query: 628 QRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 + +L + QG+LF+RPLP E +K Sbjct: 768 ELAFLQEHLCEEVQGYLFSRPLPSEDVAFYLQAQK 802 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 121/479 (25%), Positives = 226/479 (47%), Gaps = 15/479 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLP 251 N EL ++ + +E G++ + + + +R ++ A ++ LP Sbjct: 550 NQKKNGELFWESASISPI--KNEEGVITHFIAIKEDITRRKAQDRILAYQANYDALTGLP 607 Query: 252 NKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L ++ L+ + + Q A+M I + ++ L ++LL + E+LK L Sbjct: 608 NRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQVAERLKKCL 667 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F +I +++P H + +++L+ + + + + SIG+ ++ Sbjct: 668 RKSDTVARLGGDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEEEAFISASIGITLY 727 Query: 368 YGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D L A +A + + G+N +F+ E + R+ E+ + AL+ + Sbjct: 728 PDDGDDVNALMRNADTAMYLGKRGGRNDFKFYTLGMNETNRTRIIIENLLHQALKKKEIY 787 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP +E+ + K++ AE LLR P PD I E GL+ +G WV+ ++C+ Sbjct: 788 LVYQPIMELKTEKVIGAEALLRWNNPQLGQVSPDQFIPIAEETGLINQLGAWVISQACQE 847 Query: 487 LAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 + W+ +G + ++VNLS Q ++ + + + I L LE+TE ++D Sbjct: 848 VVQWKAQGTPISVAVNLSPRQFRDSKLLKIITDAIAVNGITNHDLELEITEKLLLEDSPG 907 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---M 603 + IL L +++DDFG GY+ L ++ P + LKID+ F+ + + Sbjct: 908 SQGILSQLHQMNFPLSIDDFGTGYS---ALSYLIKFPFNRLKIDRSFITDMTHSQKAMGL 964 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 + II ++ LNLQ+IAEGVET Q + L G AQG+ F+RPL E F K Sbjct: 965 VKTIIAMSHGLNLQVIAEGVETSEQLNSLKSQGCDYAQGYFFSRPLTGEEFRYYLQLNK 1023 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 137/486 (28%), Positives = 233/486 (47%), Gaps = 24/486 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N E+ L + + D G + + + E + A P++ +P Sbjct: 243 NRRKNGEIFPEWLTISGV--RDGRGKVTHYVSTFSDISNLKVAESEIHHLAFYDPLTAMP 300 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL+ L+Q + AL+II + + L + LL+ + +L + + Sbjct: 301 NRRLLLNRLDQACVSAKRSGQFGALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACI 360 Query: 308 SPRMILAQISGYDFAVIANGVQEPW-----HAITLGQQVLTIMSERLPIER-IQLRPHCS 361 A+ G +F V+ + A + +++ ++ + + S Sbjct: 361 REGDTAARQGGDEFVVMLEELGSEQEGAAVQAEIVAEKIRLELARPYLLNGDTEYFRSAS 420 Query: 362 IGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IG+++F+G T + L +A A + A+ G+N I+FFD +R E+ + AL Sbjct: 421 IGISLFFGQEKTIDILLKQADIALYKAKDAGRNAIRFFDTAMQTTLDERAELEAGLRRAL 480 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 +F +++QPQV+ +L+ AE LLR Q P + P+ I E GL+V +G WVL Sbjct: 481 VRDEFVLYVQPQVDAV-RRLIGAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVL 539 Query: 481 EESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 +++C L W + L LSVN+SA Q + VA + + L R+ P L LE+TES Sbjct: 540 DQACAELRRWADDPRSASLFLSVNVSARQFRQADFVAQVADALARHGANPRLLKLELTES 599 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 +D+ + ++ LR GVR +LDDFG GYA L ++K P + LK+D+ F+ + Sbjct: 600 LLLDNVEEVIEKMQALRTIGVRFSLDDFGTGYAS---LSYLKRFPFEQLKVDRSFIRDIN 656 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 P D++++ AII + +L L ++AEGVE + Q +L K + QG+LF RP+ + F Sbjct: 657 INPDDAAIVRAIIAMGNTLRLSVVAEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDDFR 716 Query: 656 ESYLEE 661 S E Sbjct: 717 ASLGSE 722 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 141/488 (28%), Positives = 235/488 (48%), Gaps = 15/488 (3%) Query: 184 HPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNEN 241 H + P + A + E R + + E+ Sbjct: 533 HAPDRLETSFRVCPPGGRMRWVHARGQYIAAAEDTAAARLVGTVNDVTDQKENEEQIERY 592 Query: 242 AMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLL 297 A ++ L N+ L L Q + + A++ + + + L A +++L Sbjct: 593 AHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVDLDKFKTINDTLGHAVGDVVLR 652 Query: 298 TLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLR 357 + +L P ILA++ G +F ++ G + A + +LT MS + ++ +L Sbjct: 653 EVAGRLSDFAGPDDILARLGGDEFLLVLPG-ADERAASEVAACILTAMSVPVRVDGRELP 711 Query: 358 PHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416 +IGV+++ D A+ L A A + A+ +G+N Q + P AA +RL + ++ Sbjct: 712 TTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRNTFQLYTPDMNAAAAERLQLQGEL 771 Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476 NA + + QPQ+++T G +V E L+R + P P I E GL++T+G Sbjct: 772 RNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIPLAEESGLIITLG 831 Query: 477 HWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEV 535 +W + E+CR WQ G+ L ++VNLS Q N A + + L + P L LE+ Sbjct: 832 NWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALADTSLPPQYLELEL 891 Query: 536 TESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE 595 TES + D +A L L+ GV++++DDFG GY+ L ++K P+D+LKID+ FV Sbjct: 892 TESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSS---LNYLKRFPVDLLKIDQGFVR 948 Query: 596 GL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIE 652 + P D++++ AII L + LNL++IAEGVET+ Q D+L AGV QG+ F+RPLP E Sbjct: 949 DVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGYYFSRPLPAE 1008 Query: 653 IFEESYLE 660 + Sbjct: 1009 DMATYLAQ 1016 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 145/505 (28%), Positives = 247/505 (48%), Gaps = 28/505 (5%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 R + + N + E+ + L + D G + R + ++ Sbjct: 308 FYRHMWQAILNEGHWQGEIWDKRKTGEIYAKLAHISILRRSD--GGVYRHVAQFSDITEK 365 Query: 234 HY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E A ++ LPN+ LL + L +A + ALM + + + L Sbjct: 366 KQKDELIFWQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGALMFLDLDKFKTLNDTL 425 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVL 342 A ++LL+ + ++KS + +A+I G +F V+ + A + +++ Sbjct: 426 GHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVVLLENLGADIKDATQAAAHIAEKIR 485 Query: 343 TIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQ 401 +S + SIGV++ + + AE+L +A A + A+ G+N ++FFDPQ Sbjct: 486 ASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAMYQAKEAGRNAVRFFDPQ 545 Query: 402 QMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG 461 ++ + ESD+ +A+ Q ++ Q Q++ + V AE LLR P P Sbjct: 546 MQQSVETIAALESDLRHAVHERQLQLFYQIQLD-HTHHPVGAEALLRWIHPVRGMVSPAQ 604 Query: 462 LIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLE 519 I E L++ +GHWVL+E+CR +AAW QER L L+VN+SA Q P+ V + Sbjct: 605 FIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTRDLVLAVNISARQFKQPDFVEQVGA 664 Query: 520 LLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRN-AGVRVALDDFGMGYAGLRQLQH 578 ++ ++ IQP L LE+TES +++ + + LRN G+ ++LDDFG GY+ L + Sbjct: 665 MIRKHAIQPARLKLELTESIALEELDVIITKMHALRNGLGISLSLDDFGTGYSS---LSY 721 Query: 579 MKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKA 635 +K LP+D +KID+ FV + GD+ M+ II +A + +++IAEGVET Q L + Sbjct: 722 LKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEGVETAGQFFLLKQY 781 Query: 636 GVGIAQGFLFARPLPIEIFEESYLE 660 G + QG+LF RP+P+ FE + Sbjct: 782 GCLLFQGYLFGRPVPLREFEALLQQ 806 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 135/501 (26%), Positives = 232/501 (46%), Gaps = 20/501 (3%) Query: 177 CINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ 232 + L R N E+ L++ + G + + + Sbjct: 389 AFYEDMWRALVEEGRWEDEIWNRRRNGEVYPEWLSISAIP--GPTGRTEYYVAVFHDITE 446 Query: 233 --RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 + A ++ LPN+ALL + L + + A++ + + + Sbjct: 447 LKAKESQIQHQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDS 506 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L +I L E+++ ++ P+ LA++ G +F V+ V+ A + +++L + Sbjct: 507 LGHMVGDIYLQQAAEQMRQMVRPQDTLARVGGDEFVVVLQDVEGERDAAQVAERLLARFT 566 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + + ++ +L S+G+A+F D + L A A A+ +GK + F P + Sbjct: 567 DPVRVQEHELFVGASVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRRYHLFTPAMNDR 626 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 A +RL+ E D+ AL QP+V++ +G + E L R + DGS + P I Sbjct: 627 AVRRLSLEGDLHRALAAGDITAHYQPRVDLNTGLITGMEALARWIRADGSQEHPAEFIPL 686 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRY 524 E GL+V +G +L +C A + G L ++VNLS Q H N+V + ++L Sbjct: 687 AESTGLIVPLGEHMLRLACAKTRALCDAGHADLHVAVNLSVHQFRHRNLVGMVADVLAET 746 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + P L LE+TES + D + L L G+ +++DDFG GY+ L QL K+LP+ Sbjct: 747 GLPPHLLELEITESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQL---KNLPL 803 Query: 585 DVLKIDKMFVEGLPG---DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 LKID+ F+ +P D+++ A II +A L L+++AEGVET Q ++L G Q Sbjct: 804 TSLKIDRSFIRDIPDDPNDAAIAATIITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQ 863 Query: 642 GFLFARPLPIEIFEESYLEEK 662 GFLF+RPLP + F + Sbjct: 864 GFLFSRPLPPDEFTALLARGR 884 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 137/480 (28%), Positives = 238/480 (49%), Gaps = 17/480 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLP 251 N V L++ + D G + + + + A P++ LP Sbjct: 668 NRHKDGSPVPELLSISAV--RDPHGQVTHYVGVFTDITHLKESEARLEFLAHHDPLTHLP 725 Query: 252 NKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L L+Q + + + A++++ + +D + LL + ++L L Sbjct: 726 NRLLFNNRLDQALHQAEREGRRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRL 785 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPI-ERIQLRPHCSIGVAM 366 LA++ G +FA++ + ++ A L ++L+ +SE E +++ SIG+ + Sbjct: 786 RQSDTLARLGGDEFALLMHDLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICI 845 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + T + L A +A + A+ G+ +++ + A++RL E+ + AL + Q Sbjct: 846 YPDHGRTPQTLLQGADAALYRAKGDGRGVYRYYADEMTRIARERLHIEARLRRALADGQL 905 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QPQV++ SG+++ AE L+R Q P+ P I E GL+ +G WVL E+CR Sbjct: 906 LLHYQPQVDLRSGRIIGAEALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACR 965 Query: 486 LLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 AW + G+ L ++VN+S Q ++ ++++L + P L LE+TE ++ Sbjct: 966 QARAWLDAGLPALTVAVNVSPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMERE 1025 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMF---VEGLPGDS 601 A+ +L+ LR GV VA+DDFG GY+ L +K PIDVLKID+ F + P D Sbjct: 1026 AEALQVLQRLRGLGVGVAIDDFGTGYSS---LASLKRFPIDVLKIDRSFITDIPDDPDDM 1082 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + AAII + SL + ++AEGVET Q +L + QGFL +RPLP + FE+ E+ Sbjct: 1083 EIAAAIIAMGHSLGILVLAEGVETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLREQ 1142 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 138/448 (30%), Positives = 219/448 (48%), Gaps = 14/448 (3%) Query: 226 LNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCET 279 L + + QR E+ A ++ LPN+ALLM+ LEQ++ + + L+ + + Sbjct: 283 LMEDVTQRKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDR 342 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 + + A + LL+ + +L+ L LA+I G +F V+ + L Q Sbjct: 343 FKVINDTMGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQ 402 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFF 398 ++ ++ PI + SIG+A F D L A A + A+ G F+ Sbjct: 403 HLIDSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKEGGGKGYHFY 462 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 P+ A R+ E+++ +ALE +F + QP V G+LV AE LLR P+ + Sbjct: 463 SPEMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIM 522 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADM 517 PD I E G +V +G WVL +CR + W+E G+ +SVN+S Q N + Sbjct: 523 PDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTV 582 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 ++ + P L LE+TE+ + D A L L+ + + +DDFG GY+ L Sbjct: 583 CSIIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSS---LG 639 Query: 578 HMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 +++ PID +KID+ F+ L D +++ AII +A L LQ++AEGVET Q D+L + Sbjct: 640 YLQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKE 699 Query: 635 AGVGIAQGFLFARPLPIEIFEESYLEEK 662 G QGF F RPL E+F+ E K Sbjct: 700 QGCHEIQGFYFHRPLSEELFKTLLWEIK 727 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 133/504 (26%), Positives = 238/504 (47%), Gaps = 26/504 (5%) Query: 182 ILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQN 239 ++ R ++ + A E + L D G + Q + R E+ Sbjct: 205 LMERGRPLSLDCQTATADEEDKRFIHLEAEEHRDASGRITLVSGTIQDITSRKLAEEKIR 264 Query: 240 ENAMRFPVSDLPNKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREIL 295 A ++ LPN+ L E L + +A K+ A+M++ + + L ++L Sbjct: 265 YLAYYDSLTGLPNRVLFKEHLRRALATSEQHKRQLAIMLLDLDRFKGINDSLGHDAGDLL 324 Query: 296 LLTLVEKLKSVLSPRMIL------------AQISGYDFAVIANGVQEPWHAITLGQQVLT 343 L + ++L+ + P + A++ G +F ++ G+ P A + ++V+ Sbjct: 325 LQQVADRLRLRVRPYDTVSRDSEEQRDSLIARLGGDEFTILLEGITTPEAAARVARRVIE 384 Query: 344 IMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQ 402 + + ++ CSIG++++ D T E L A A + A+ G + QF+ + Sbjct: 385 ALEAPFALNGNEVFISCSIGISIYPHDGTDLEILVKNADVAMYCAKDLGCSTFQFYTQEM 444 Query: 403 MEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGL 462 + +RL E+ + A E +F + QPQ++ + +++ E L R P+ P Sbjct: 445 NSVSLQRLILETHLRKAFEKEEFFLHYQPQIDCVTNRIIGLEALARWNNPELGLVSPGSF 504 Query: 463 IDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELL 521 I E GL++ + WVL C+ L AWQ GI L ++VNLSA + N+ + ++ Sbjct: 505 IPLAEETGLIIALDRWVLATVCKQLEAWQAAGIPLVRVAVNLSARHFLKANLNKTIQQIR 564 Query: 522 TRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKS 581 +R L LE+TE +++ V++L L+ GV +++DDFG GY+ L ++ Sbjct: 565 SRGAAARDHLDLEITEGMLMENAEEVVSVLGMLQETGVNISIDDFGTGYSS---LSYLTR 621 Query: 582 LPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVG 638 LP LKID+ F+ + +S++ AII LA SL +++AEGVET Q +L + G Sbjct: 622 LPFHTLKIDRSFISQSGDNVESASVVTAIIALAHSLGKEVVAEGVETSTQLQFLKENGCR 681 Query: 639 IAQGFLFARPLPIEIFEESYLEEK 662 + QG+LF+RPLP + E E + Sbjct: 682 VIQGYLFSRPLPEDKIRELLREGR 705 >UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=cellular organisms RepID=A4XXL0_PSEMY Length = 711 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 170/669 (25%), Positives = 310/669 (46%), Gaps = 26/669 (3%) Query: 13 AMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAI 72 +V LV + + + R A + I R+P + A+ D + Sbjct: 39 RVVLLSALVVGVVLSCAQIVFDAYKTRQAVANDAQRILGMFRDPSTQAVYSLDREMGMQV 98 Query: 73 LASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLE---R 129 + + V A + PN+ KS R + + TR P+ +S + R Sbjct: 99 IEGLFQHESVRYAAIGHPNEPMLAEKS----RELVQIATRWLTDPILGQEQQFSTKLVGR 154 Query: 130 PANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNI 189 + L + D+ + ++ + +L ++ + + + + L+ PL I Sbjct: 155 GPYSEYYGDLNITLDTAPYGESFVTNSVIIFVSGVLRAMAMALVLYLVYHWLLTKPLSKI 214 Query: 190 ARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR-------HYEEQNENA 242 L +I H+L + + ++ +E+G+ + + N ++R A Sbjct: 215 IEHLTSINPDRPSEHKLPMLKGNEKNELGLWINTANQLLASIERNTHLRREAENSLLRMA 274 Query: 243 MRFPVSDLPNKALLMEML----EQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLT 298 ++ LPN+ L + L E ++ A++ + + + + LLL Sbjct: 275 QYDFLTGLPNRQQLQQQLDQILEDAGRLQRRVAVLCVGLDDFKGINEQFSYQSGDQLLLA 334 Query: 299 LVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRP 358 L ++L+S LA++ G FA++ +++P+ A L Q VL + ++ ++R Sbjct: 335 LSDRLRSHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSVLDDLELPFLLDHQEVRL 394 Query: 359 HCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 +IG+ +F D + E+L +A A+ + +N+ QF+ ++R E D+ Sbjct: 395 RATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFYIASVDSEMRRRRELEKDLR 454 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 +AL +Q + QPQV+ ++V E LLR Q P + PD I E G ++ +G Sbjct: 455 DALALNQLHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVAPDLFIPLAEQNGTIIPIGE 514 Query: 478 WVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 W+L+++CR L W ++G L +++NLS +QL H + + L+ YR+ P +L LEVT Sbjct: 515 WILDQTCRQLREWHDQGFTDLRMAINLSTVQLHHAELPRVVNNLMQVYRLPPRSLELEVT 574 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 E+ ++D A L LR +G +A+DDFG GY+ L ++KSLP+D +KIDK FV+ Sbjct: 575 ETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSS---LSYLKSLPLDKIKIDKSFVQD 631 Query: 597 L---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 L D++++ AII L +SL +Q+IAEGVET Q ++ G QG+L+++PLP Sbjct: 632 LLEDEDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAQGCHEGQGYLYSKPLPARE 691 Query: 654 FEESYLEEK 662 + + Sbjct: 692 LTLFLKQAR 700 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 139/481 (28%), Positives = 231/481 (48%), Gaps = 24/481 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLP 251 N E+ L + + + G + + + +R E+ A+ P++ LP Sbjct: 555 NRRKNGEIYPEWLTISAV--RGQHGEITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLP 612 Query: 252 NKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL E L + + +++ AL+ I + + + ++LL + +L+ + Sbjct: 613 NRRLLNERLSKALTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESV 672 Query: 308 SPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 ++++ G +F ++ + + Q++L + + SI Sbjct: 673 RSNDTVSRLGGDEFVILLEELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASI 732 Query: 363 G-VAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALE 421 G + T E L A A + A+ GKN++ FFDP + R E D+ A Sbjct: 733 GAIPFMDATETIESLLKSADMAMYKAKAAGKNRLFFFDPAMQTEVEARAALERDLRQAQR 792 Query: 422 NHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLE 481 QF ++LQPQV+ SG + AE L+R Q P LP E L++ +G WVLE Sbjct: 793 EKQFVLYLQPQVD-QSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLE 851 Query: 482 ESCRLLAAWQE--RGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESR 539 E+C+ L WQ+ L L++N+SALQ +P+ V D+ + L LE+TES Sbjct: 852 EACKQLVIWQKNPDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESL 911 Query: 540 RIDDPHAAVAILRPLR-NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 ++D + ++ L+ GV ++LDDFG GY+ L ++K LP+D +KID+ FV+ + Sbjct: 912 LLEDIDGTIERMQVLKNQLGVGLSLDDFGTGYSS---LSYLKQLPLDQIKIDRSFVKDIH 968 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 P D+++ A+I L +S +L +IAEGVET QRD L G QG+LF RP PI+ F Sbjct: 969 CNPNDAAIAEAVIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAFP 1028 Query: 656 E 656 Sbjct: 1029 A 1029 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 150/479 (31%), Positives = 234/479 (48%), Gaps = 22/479 (4%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDL 250 N E + + D E ++ + QR E + A ++ L Sbjct: 431 FNKRKNGEEYLQWTMITAVISDHED-EIINYVITLIDITQRKAAESKIKQLAFYDQLTGL 489 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN+ LLME LE Q A++ + + + + L + ++L Sbjct: 490 PNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDC 549 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWH-----AITLGQQVLTIMSERLPIERIQLRPHCS 361 + +A+I G +F +I + A L +++L +S+ I+ I+ S Sbjct: 550 VRRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKPYYIDNIEHFSTLS 609 Query: 362 IGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 IGV +F G+ ++L A A + A+ G+N +FF+P+ + +DI +AL Sbjct: 610 IGVTLFLGETKGIDELLKHADLAMYQAKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHAL 669 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 ++F ++ QPQV G+L AE L+R Q P P I E GL++ +G WVL Sbjct: 670 TRNEFTLYYQPQV-THDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETGLILPLGEWVL 728 Query: 481 EESCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 +++C++LA WQ + L L++N+SA Q V +LE L RYR P L LE+TES Sbjct: 729 DQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRANPDRLKLELTES 788 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 +D + + L+ GV +LDDFG GY+ L ++K LP+D LKIDK FV L Sbjct: 789 MLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSS---LNYLKRLPLDQLKIDKSFVRDLL 845 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 D+ + I+ LA+S+NL +IAEGVET+ QR LA G QG+LF+RP+P+E F Sbjct: 846 TNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 136/500 (27%), Positives = 242/500 (48%), Gaps = 26/500 (5%) Query: 174 ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 I + I HPLR + E +L+ ++ R+ + +R Sbjct: 448 ILYNETDAIRHPLRVLTAE------GKLLDVEMYSNRIMYQGSP----AVIGTILDVTER 497 Query: 234 HYEEQ--NENAMRFPVSDLPNKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVL 287 E+ A +++LPN+ EMLE + + A+M + + + L Sbjct: 498 KRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMYLDMDRFKYINDSL 557 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 A + LL+ ++L+ + A++ G +F VI +++ AI + ++++ E Sbjct: 558 GHAVGDQLLIAFSKRLQEQIRETDFAARMGGDEFTVILPHIRDNNSAIEVARRIIERTRE 617 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 IE +L SIG++++ D + L A SA F A+ GKN Q F Sbjct: 618 PFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKNGYQIFTSSMNVQT 677 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 K T E D+ A++ + ++ QP+V + +G++V AE L+R P+ P+ I Sbjct: 678 YKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWNHPEWGLVSPNEFIPIS 737 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL++++G+WV CR WQ G+ +P+S+N++A + + + + + ++L Sbjct: 738 EETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLSKDFMDAIQQILAETG 797 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP-- 583 ++P L +E+TES +++ + L L GV ++LDDFG GY+ L ++K Sbjct: 798 LEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTGYSS---LSYLKRFKHT 854 Query: 584 IDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 I++LKID+ F+ L D+++I+AII LAQ +N+ ++AEGVET Q L + Sbjct: 855 INILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQLHILKLLKCDLV 914 Query: 641 QGFLFARPLPIEIFEESYLE 660 QG+LF+RP+ E F + Sbjct: 915 QGYLFSRPVQAEAFAQLLKR 934 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 126/480 (26%), Positives = 239/480 (49%), Gaps = 19/480 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N E+ L++ + D GM L +R E+ + P+++LP Sbjct: 472 NRRKNGEVFPQWLSIQAVT--DSAGMARNYIASITDLTERKQVEEKLRYLSDFDPLTNLP 529 Query: 252 NKALLMEMLEQVVARKQT-----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 N+ LL ++Q ++ + AL+ I + ++ L + +L + +++ + Sbjct: 530 NRRLLGYRVDQTLSLSRRQPDQQFALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITEL 589 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + ++++ G +F ++ + + A L +++L +++ L + L S+G+A+ Sbjct: 590 VREGDTVSRLGGDEFMILMPELHKLEQAANLAERILHNIAQPLENDSH-LMITPSVGIAV 648 Query: 367 FYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D + ++L A +A A+ +G+N QF+ + + A +RL E + A+EN +F Sbjct: 649 YPNDGDSFDKLLRNADAAVHFAKRQGRNNYQFYTAEMNQRASERLQVEISLRKAVENQEF 708 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QPQ+ + G L E L+R + P+ P+ I E GL++ +G WVL E+CR Sbjct: 709 ELFYQPQLNLRDGSLAGVEALIRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACR 768 Query: 486 LLAAWQER-GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 A W + +SVN+S Q P +V ++ L + P +L++E+TES + D Sbjct: 769 QGAEWAAKSTEPFTMSVNVSVRQFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQDE 827 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDS 601 + +L L+ GV+++LDDFG GY+ + ++K +D LKID+ F+ L P D+ Sbjct: 828 EKTLTLLHELKELGVQLSLDDFGTGYSSM---AYLKRFNLDQLKIDRAFISDLPQNPDDA 884 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ++ +AII +A L +AEG+E Q ++LA G QG+ + +P+P E Y + Sbjct: 885 AITSAIIDVASHFGLVTVAEGIEKPEQAEFLASVGCIEGQGYYYEKPIPANDLTERYFAD 944 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 127/501 (25%), Positives = 224/501 (44%), Gaps = 48/501 (9%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE----------------- 237 E +L++ LH +D+ + + +R E Sbjct: 588 QRKDGEKFIVELSISALHPEDKKAQ--GFLFVASDITERKRAEDALLRSRDELELRVKER 645 Query: 238 -----------------QNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIIT 276 A ++ L N+ LL + L + + A++ I Sbjct: 646 TSELESEVLERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFID 705 Query: 277 CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAIT 336 + + L + LL + +L L +A++ G +F +I A Sbjct: 706 LDRFKTINDSLGHHIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGK 765 Query: 337 LGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQI 395 L ++L + + I+ +L SIG+ + D T L A +A + A+ G+N Sbjct: 766 LASKILDALRPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTY 825 Query: 396 QFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGS 455 +F + AA ESD+ A++ ++F ++ QP +++ + ++ S E L+R + P Sbjct: 826 CYFTAEMNAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKG 885 Query: 456 WDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPL-SVNLSALQLMHPNMV 514 P I E GL+ +G VL ++C L +W + G P+ ++NLS +Q PN+ Sbjct: 886 LVGPAQFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLT 945 Query: 515 ADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLR 574 + +L Y + P + LE+TE+ + D A+ L+ L + G R+++DDFG GY+ Sbjct: 946 EGICRILRDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSS-- 1003 Query: 575 QLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDW 631 L ++K P+D LKID+ F+ + D +++ AI+ LA SL+L +IAEGVET+ Q D Sbjct: 1004 -LAYLKRFPVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDL 1062 Query: 632 LAKAGVGIAQGFLFARPLPIE 652 L+ AQG+ A+P+P E Sbjct: 1063 LSALNCNFAQGYYMAKPMPAE 1083 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 146/466 (31%), Positives = 231/466 (49%), Gaps = 28/466 (6%) Query: 217 IGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTT 270 G + NQ + R EE + A ++ LPN+ L+ + LE + RK Sbjct: 357 DGQTIGIVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHG 416 Query: 271 ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQE 330 AL++I + + + LLL + ++LK+ + A++ G +F VI + Sbjct: 417 ALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILEDIDG 476 Query: 331 PW----HAITLGQQVLTIMSERLPI------ERIQLRPHCSIGVAMFYGDL--TAEQLYS 378 A + + ++ + I R SIG+A+F D TA++L Sbjct: 477 AGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALF-DDTMVTAKELLR 535 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 RA +A + A+ G+N ++FFDP+ A R E+++ A++ QF + Q Q++ SG Sbjct: 536 RADTAMYQAKAAGRNTLRFFDPEMQAAVTHRAALETELRKAIDEQQFHLCFQVQMD-QSG 594 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-- 496 + E LLR + P P I E GL+V +G WVL +CR LAAW ++ Sbjct: 595 RPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSG 654 Query: 497 LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRN 556 L L+VN+SA Q + +LL + L LE+TES ++D A + + L+ Sbjct: 655 LTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQ 714 Query: 557 AGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQS 613 G+R +LDDFG GY+ L ++K LP++ LKID+ FV + P D+++ I+ L Sbjct: 715 LGIRFSLDDFGTGYSS---LAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNI 771 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 L L++IAEGVET+AQ +LA G QG+LF RPLP+ FE+ Sbjct: 772 LGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQFLQ 817 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 151/497 (30%), Positives = 246/497 (49%), Gaps = 15/497 (3%) Query: 177 CINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRH 234 + + R L++ + D G + S L + + + Sbjct: 489 AVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDISLQREA 548 Query: 235 YEEQNENAMRFPVSDLPNKALLMEM----LEQVVARKQTTALMIITCETLRDTAGVLKEA 290 E A P++DLPN+ LL E + Q AR AL+ + + ++ L Sbjct: 549 QERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHR 608 Query: 291 QREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLP 350 +ILL+ + +L+S++ P+ ++++ G +F ++ HA + +LT +++ Sbjct: 609 IGDILLVAVARRLQSLIGPQDTVSRLGGDEFLLLLP-ATSAAHAAKVASALLTAVAQPFQ 667 Query: 351 IERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKR 409 I+ +L S+G+AM D + + LY RA +A ++A+ G+N+ FF + Sbjct: 668 IDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGRNRYGFFTADLQARTARA 727 Query: 410 LTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECC 469 L E+ + ALE QF + QPQV + +G++V AE LLR P+ P I E Sbjct: 728 LQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENS 787 Query: 470 GLMVTVGHWVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQP 528 G +V +G WVL + R W + + L +SVNLSA+Q HP + + L + + Sbjct: 788 GQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPA 847 Query: 529 GTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLK 588 L LE+TE +DDP AA+A++ L + GVR+++DDFG GY+ L +K I LK Sbjct: 848 RRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSS---LSCLKRFQIYKLK 904 Query: 589 IDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLF 645 ID+ FV L D+ ++++AII +AQ+L +Q AEGVET+ Q +L G QG+LF Sbjct: 905 IDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLF 964 Query: 646 ARPLPIEIFEESYLEEK 662 +RPLP + FE K Sbjct: 965 SRPLPADAFEAYLRAMK 981 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 133/502 (26%), Positives = 238/502 (47%), Gaps = 19/502 (3%) Query: 176 WCINRLILHPL---RNIARELNAIPAKELVGHQLALPRLH--QDDEIGMLVRSYNLNQQL 230 W +RL++ R I A+ G ++ + ++ M + + + Sbjct: 321 WATHRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTIARDI 380 Query: 231 LQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTA 284 +R +E A ++ LPN+ LL + +E VVA + +++ + + + Sbjct: 381 TERKHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDNFKRIN 440 Query: 285 GVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTI 344 L A + +L ++L+ + P ++A+ G +F ++ + + + +V Sbjct: 441 ESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAILHKVRAA 500 Query: 345 MSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQM 403 L I ++ S+GV+++ D L A +A + ++ G+N+ QF+ P+ Sbjct: 501 FETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNRYQFYAPEMN 560 Query: 404 EAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLI 463 Q+ L+ E+D+ AL+ +F + QPQ+++ ++ E LLR + P P + Sbjct: 561 ARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFV 620 Query: 464 DRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLT 522 +E GL+V VG WVL +C A +E G+ + +SVN+SA Q ++ + ++L Sbjct: 621 PLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQVEQVLR 680 Query: 523 RYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSL 582 + P L LE+TES + D A IL L GVR+A+DDFG GY+ L ++K Sbjct: 681 EECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSS---LAYLKRF 737 Query: 583 PIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGI 639 P+D LKID+ F+ P D +++ A I L L L+++AEGVET Q +L + + Sbjct: 738 PLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRACDL 797 Query: 640 AQGFLFARPLPIEIFEESYLEE 661 QGF F+RPLP + Sbjct: 798 IQGFHFSRPLPADALTPFLARH 819 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 142/480 (29%), Positives = 241/480 (50%), Gaps = 17/480 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLPN 252 EL L++ ++ D+ G + ++ L ++ E+ E ++ LPN Sbjct: 577 RRKNNELHPKWLSISAVY--DQRGRITHYVGISNDLTATKQTQEKLEELTHYDQLTSLPN 634 Query: 253 KALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 L + L+Q +AR + AL+I + ++ L + +++L + ++L+ LS Sbjct: 635 ILLFRDRLQQAMARARREEHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLS 694 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 + + G +F ++ + + A+ Q VL + S+ QL SIG+ +F Sbjct: 695 LADTICRPGGDEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFP 754 Query: 369 GDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 D E L +A + A+ G N QFF AA R+T ++ + A+E +F + Sbjct: 755 DDGEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVELEEFEL 814 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDG-SWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP++ +V AE L+R QP+ P I E GL++ +G WVL ++CR Sbjct: 815 YYQPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQ 874 Query: 487 LAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 WQ+ G+ L ++VNLSA+Q P + ++ +L + L LE+TES ++D Sbjct: 875 SLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVT 934 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSS 602 A A L L++ G+ +ALDDFG GY+ L ++K+ P+D LKID+ FV L D + Sbjct: 935 TANATLWKLKDMGIHLALDDFGTGYSS---LSYLKNFPLDTLKIDREFVRDLSTDDEDRA 991 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 +I II LA SL ++++AEGVE Q +L + G + QG+ F+RPLP + FE+ + Sbjct: 992 VIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQN 1051 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 141/499 (28%), Positives = 229/499 (45%), Gaps = 20/499 (4%) Query: 175 SWCINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQL 230 + H L+ N + E L++ + D G V+ + Sbjct: 464 DAPFYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIATVTND--KGETVQYVAAFSDI 521 Query: 231 LQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTA 284 +R E A ++DLPN+ L + L+ + R Q AL+ I + + Sbjct: 522 TKRKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRSQRSGQQVALLFIDLDRFKFVN 581 Query: 285 GVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTI 344 L + LL + +L + +A++ G +F VI + P L Q ++ Sbjct: 582 DTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTVILPELHGPEGVARLAQGMIDK 641 Query: 345 MSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQM 403 + ER I+ +L SIG+ ++ D L A A + A+ G+ F+ + Sbjct: 642 LEERYCIQDHELFISASIGITIYPEDADNMMDLVKNADVAMYRAKENGRGSFCFYTAEMN 701 Query: 404 EAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLI 463 A++ E + ALE QF I QP V+ +SG + E L+R + G PD I Sbjct: 702 ADARQLHKIEQALRVALEEGQFWIHYQPYVQQSSGLITGVEALIRWRNSAGEIVYPDQFI 761 Query: 464 DRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLT 522 E GL+V +G WVL ++A WQ G + SVN+SA Q ++V + L Sbjct: 762 PVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDITFSVNVSARQFQEGHLVGQIKAALQ 821 Query: 523 RYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSL 582 +I P +L+LE+TES I DP + +L+ ++ GVRVALDDFG GY+ L ++K Sbjct: 822 ENQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGVRVALDDFGTGYSS---LGYLKQF 878 Query: 583 PIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGI 639 PID+LKID+ F+ G+ D +M++AI+ +A SL + +I EG+E + Q + Sbjct: 879 PIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGEGIENDQQLQRVNLHACDY 938 Query: 640 AQGFLFARPLPIEIFEESY 658 QGF ++RP+P + + Sbjct: 939 VQGFFYSRPMPYDELALFF 957 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 685 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 141/487 (28%), Positives = 245/487 (50%), Gaps = 19/487 (3%) Query: 186 LRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAM 243 + +N K + DE+G + ++ + R A Sbjct: 919 WQGELDYINRKGEKHPSWTGVTAL----KDEMGQIQSHIIISSDITHRKQTEARIQHLAY 974 Query: 244 RFPVSDLPNKALLMEMLEQVVARKQ-TTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302 P++ LPN+A + E L++++A+++ AL+ I + + + + +L + + Sbjct: 975 FDPLTGLPNRAQMHEALDRLMAKEESQLALLFIDLDRFKPINDTMGHPAGDQVLKEVASR 1034 Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEPWHAIT----LGQQVLTIMSERLPIERIQLRP 358 LK + + ++++I G +F VI + E AI + +++L M + IE QL Sbjct: 1035 LKEAVGAKNLVSRIGGDEFTVIMATLPETEQAIQTIIDVSERILHQMMQPFFIEDRQLYL 1094 Query: 359 HCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 S+G+A++ + + L A +A + A+ GKN QF+ + E A +RL E+++ Sbjct: 1095 SASVGIALYPENALSGTDLLRNADTAMYHAKAMGKNNFQFYAEEMNEKAMERLELENNLH 1154 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 AL+ +F + Q Q ++ + E LLR +PD PD I IE GL+V +G Sbjct: 1155 LALQRDEFELTFQAQWDIKHNCICGVETLLRWHRPDIGLVGPDKFIPIIEETGLIVPIGE 1214 Query: 478 WVLEESCRLLAAWQERGIMLP-LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 WVL +C + WQE G ++P L+VNLSA Q M+ + ++ + P + LE+T Sbjct: 1215 WVLRRACEQIMDWQEAGYVIPKLAVNLSARQFKDAQMLDRICRIVDETGVDPELIELELT 1274 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 ES +DD +A+L R G +++DDFG GY+ L ++K P+ LKIDK F++ Sbjct: 1275 ESILMDDIDRTLAVLNEARKMGFGLSIDDFGTGYSS---LSYLKQFPVSQLKIDKSFIQN 1331 Query: 597 LP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 LP D + I+ +A +L L +IAEGVE E+QR +L G QG++++ P+P ++ Sbjct: 1332 LPYNQEDGQITRTIVAMANNLGLGVIAEGVENESQRQFLKTIGCYQVQGYMYSHPVPADL 1391 Query: 654 FEESYLE 660 F + +LE Sbjct: 1392 FAQDFLE 1398 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 154/667 (23%), Positives = 292/667 (43%), Gaps = 47/667 (7%) Query: 32 FHLVQQNRYNTATQLESIARSVRE----PLSSAILKGDI---PEAEAILASIKPAGVVSR 84 + + + + Q + + PL+ + + D +A +L + + + V+ Sbjct: 425 MLDIDADVLDLSQQARELLNIAADRQQVPLAEVMAQFDEATFKKAGRLLEAFRHSHSVAT 484 Query: 85 ADV----VLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLV 140 ++ VL R+ + R + V+ + V S+ + R A + + Sbjct: 485 HEIHFDAVLVTPHGVRRRLALSARTLQVVGQGHY---VTGSVQDVTSLRRAERELMLSAQ 541 Query: 141 L-------QADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCIN------------RL 181 + + ++ + + +L + + L Sbjct: 542 VFEHGSEAVFITDASHRILRVNPAFEAITGYAAGEVLGLTPDFRCVSSPGGTSISQRWEL 601 Query: 182 ILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNEN 241 R + + E AL + + G ++ + E Sbjct: 602 AEQTGRWQGEIVCRRRSGEHYYEWSALSVVRHAN--GSVLYFIGQFSDISAVKAAEARAL 659 Query: 242 AM--RFPVSDLPNKALLMEMLEQVVARK-QTTALMIITCETLRDTAGVLKEAQREILLLT 298 + P++ LPN++LL + L++V+ R+ A++ + ++ L + +L Sbjct: 660 RLACFDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKE 719 Query: 299 LVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRP 358 + +L + + P + + G +F ++ G+ + L +Q+L +S + ++ + LR Sbjct: 720 VARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRV 779 Query: 359 HCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 S+GVA+F D + L A +A + A+ +G+N +FF + + + L E + Sbjct: 780 TPSLGVAVFPRDGNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLR 839 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 +ALE +F + QPQV+M G++V E LLR + P+ P + E GL+V +G Sbjct: 840 SALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGM 899 Query: 478 WVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 WV+ E+CR W+ G+ + ++VNLS Q ++ + E L + P L +EVT Sbjct: 900 WVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSRS-VIEAIDEALADSGLDPRWLQVEVT 958 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 ES ++D A +L LR G+ VA+DDFG GY+ L ++K PID LKID+ F+ Sbjct: 959 ESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSS---LAYLKRFPIDKLKIDRSFIRD 1015 Query: 597 L---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 + + ++ AII +A +L ++++AEGVET AQ D+L + G QG+L +RP P Sbjct: 1016 IDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAA 1075 Query: 654 FEESYLE 660 + LE Sbjct: 1076 LGQWMLE 1082 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 132/501 (26%), Positives = 241/501 (48%), Gaps = 27/501 (5%) Query: 180 RLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEI-GMLVRSYNLNQ-------QLL 231 + + HPL N + + ++ + + DE+ + N+ + Sbjct: 189 KSLHHPLLK-----NLLDQGKPKDEKIVIREVKIGDEVFEQHLHYLTENKLIRSYIFDIT 243 Query: 232 QRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARK----QTTALMIITCETLRDTAG 285 R E + A ++DLPN++L E L +A+ A+M I + ++ Sbjct: 244 DRKMAENSLHYQAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKNIND 303 Query: 286 VLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIM 345 L + LL + ++L+ L ILA+ G +F ++ ++ ++V +I+ Sbjct: 304 TLGHTLGDELLGSFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVFSIL 363 Query: 346 SERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + + L SIGVA++ D AE + A +A + + G+N Q + P Sbjct: 364 QQPFQVGNHLLYLKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNHYQIYHPLITS 423 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLID 464 +RL E+ + ALE QF + QPQ+ + + + E L+R + P P I Sbjct: 424 KTSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPAKFIP 483 Query: 465 RIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTR 523 E GL++++G WVL ++C WQ++G+ + ++VNLSA Q PN V + ++L Sbjct: 484 IAEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTKILAE 543 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 ++P L LE+TE+ + + + I+ L++ GV +++DDFG GY+ L ++K +P Sbjct: 544 TNLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSS---LGYLKQIP 600 Query: 584 IDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 + +KID+ F++ L P D ++I+A++ + + N+++IAEGVET+ Q + L K Sbjct: 601 FNTIKIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEEM 660 Query: 641 QGFLFARPLPIEIFEESYLEE 661 QGF F++PL E Sbjct: 661 QGFKFSKPLKPEAAANFLSNH 681 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 133/486 (27%), Positives = 242/486 (49%), Gaps = 32/486 (6%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLP 251 N E+ LA+ + + +G + + L +R E A ++ LP Sbjct: 459 NRRKNGEVYPEWLAISAV--RNAVGEITHYVAIFSDLSERKAADERIQFLAHFDVLTGLP 516 Query: 252 NKALLMEMLEQVVARKQTTALMIITCE------------TLRDTAGVLKEAQREILLLTL 299 N+A + + +E + + + L + + LL L Sbjct: 517 NRAHIQDRVELAIQNATR--------DNERLALLLLDLDRFKTINESLGHSAGDALLQVL 568 Query: 300 VEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPH 359 E+++S L ++A+ G +F V+ + +P A +++ ++ + + + Sbjct: 569 AERIRSTLLTGEVVARQGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFNHSISIT 628 Query: 360 CSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILN 418 SIG+++F D E L A +A + A+ G+N +F+ A++ L ES + Sbjct: 629 PSIGISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAREILEIESQLRY 688 Query: 419 ALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHW 478 AL+ +F + QPQV++ +G+++ AE L+R Q P+ P I+ E G +V +G+W Sbjct: 689 ALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNW 748 Query: 479 VLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTE 537 V++E+CR LA W+ +G+ + L+VNLS LQ ++ + L+ + + L +EVTE Sbjct: 749 VIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTE 808 Query: 538 SRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL 597 S +DD + + +++ G+++++DDFG GY+ L ++K D LKID+ FV + Sbjct: 809 SVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSS---LSYLKRFKADKLKIDRSFVRDI 865 Query: 598 P---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 P DS++ AII +A++LN+ +IAEGVET Q +L + G AQG+L A+P+P + F Sbjct: 866 PMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEF 925 Query: 655 EESYLE 660 E + Sbjct: 926 ERLLEK 931 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 66/236 (27%), Gaps = 17/236 (7%) Query: 4 SRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILK 63 SL + + V +L+ I + T + V + + Sbjct: 16 RFSLRVVVLVAVILGLLIPASIITVLGFGLQRDNMVAQLETDQRRLLDIVALGMQEPLWN 75 Query: 64 GDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLG 123 ++AS+ V V + ER + + Sbjct: 76 LSRQAGSPLIASVMEDSRVISVRVTDTQSNTVFLYALRSERRI-------------GGVS 122 Query: 124 VYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLIL 183 + I + ++ D+ + + L L+ I + + I ++ L Sbjct: 123 FVQKPVIYRGEEIGQVTIEFDTEHLTIAQSNQLKNLLMILFAQLGLSILLIVGILHSRFL 182 Query: 184 HPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN 239 P+R + + + L + DEIG L R + L+R +E Sbjct: 183 KPMRTLTEQATHLAELHLD----TPFLWERKDEIGRLGRHLEWTRAELKRLIDELR 234 >UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U286_MARAV Length = 692 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 170/673 (25%), Positives = 306/673 (45%), Gaps = 24/673 (3%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 V L + + V V L+ + V + ++ V + + A Sbjct: 11 FEVENHLGYRILRWVLLVALLSGILMSAVQVVLDAKRVSAELERDAAQTLAMVEDSATQA 70 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPN-QFQALRKSFIPERPVPVMVTRLFELPVQ 119 + D A+ ++ + + A + P+ R + + P + +F + Sbjct: 71 VFSIDDTLAQQVVDGLFALEPIHMAKITHPDGDELGDRLRPLQDSPFRPLTDPIFGQVRE 130 Query: 120 ISLGVYSLERPANPQPI-AYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCI 178 SL R +NP + YL + D+ + + + L+LIL + + Sbjct: 131 YRE---SLTRGSNPDLVYGYLEVHYDTAPYARTWLGRALVTFASGIALALILGIVLFVVF 187 Query: 179 NRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRS-------YNLNQQLL 231 + L+ PL I + + + +++P H+ DE+G+ V + Q+ Sbjct: 188 HLLLTRPLLRIVQSVKKVDPAHPDDRLVSIPEGHRADELGLWVNATNNLLVAIGDTQKKH 247 Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVL 287 + + A ++ LP++ ME L+ + R Q + ALM+ + + Sbjct: 248 REAEDRVTRLARYDTLTGLPSRDAFMEDLQGAIERAQEGHSSIALMVCGIDDFKSVNEQC 307 Query: 288 KEAQREILLLTLVEKLKSVLSPRMI-LAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 + +L T+ +L + LS +A++ F ++ +++ + A ++VL + Sbjct: 308 GFRTGDTILQTVASRLTANLSSDRFNVARLGSDQFVIVEKHLRDGFQAAETAEKVLATIG 367 Query: 347 ERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEA 405 + ++ ++G+++F D A++L A A+ G N QF+ + Sbjct: 368 SPINSGNHRISMTATLGISLFPSDADQADRLLQSAEQTMALAKQTGHNHFQFYVASIDKE 427 Query: 406 AQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDR 465 ++R E D+ AL NH+F + QPQ+ + + +++ AE LLR + P+ PD I Sbjct: 428 IRERKQMEKDLAQALANHEFHLVYQPQINLETRRVIGAEALLRWEHPEHGMIPPDLFIPV 487 Query: 466 IECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E G +V +G WVL+++C A W G L ++VNLSA+QL ++V D+L L R+ Sbjct: 488 AEANGSIVEIGQWVLDQACWQAARWASEGTHLRIAVNLSAVQLRQESIVDDILNTLKRHN 547 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 I G L LEVTE+ + + AVA L L AG+ +A+DDFG GY+ L ++K +P+ Sbjct: 548 IPAGRLELEVTETSFMTNLTDAVAKLHRLHRAGISIAVDDFGTGYSS---LTYLKQMPVQ 604 Query: 586 VLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKIDK F+ L D+ + II L +SLNL ++AEGVET Q +L++ G +AQG Sbjct: 605 HLKIDKQFIRDLLINEEDTRIANTIIDLGKSLNLTVVAEGVETAEQEYYLSQRGCALAQG 664 Query: 643 FLFARPLPIEIFE 655 + F++PL F Sbjct: 665 YFFSKPLLPRDFA 677 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 133/486 (27%), Positives = 238/486 (48%), Gaps = 14/486 (2%) Query: 187 RNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMR 244 + + I ++ ++ ++ G L+ + + +R A Sbjct: 232 DRVVNFESQIYRRDGSTIWISENARAVRNDAGKLLYFEGTVEDITERKSYNALIEYQATH 291 Query: 245 FPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLV 300 ++ LPN+ L+ + L Q ++ A++ + + +D + + LL+ + Sbjct: 292 DDLTGLPNRTLMQDRLLQAISYADRTASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMA 351 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC 360 +L+S + +A+ G +F ++ + + Q+VL + SE IE Sbjct: 352 RRLESCIRDSDTVARPGGDEFVLLLSNIHGMDALSQTLQRVLALTSEPCSIEGKDFTVTS 411 Query: 361 SIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNA 419 SIG++++ D T+E L A +A + A+ +GKN QF+ + +RL E + NA Sbjct: 412 SIGISLYPDDGKTSETLLKNADTAMYKAKQEGKNNFQFYTRELNSILVERLEMEYQMRNA 471 Query: 420 LENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWV 479 L +++F + QP++ + + ++ E L+R P P+ I E L+ +G WV Sbjct: 472 LGHNEFHLHYQPKLNLRTQRITGVEALIRWHNPRQGLISPNRFIPIAEESSLIEQIGSWV 531 Query: 480 LEESCRL-LAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 LE++C +A Q G +P+SVN+S Q N+V ++ +L ++P L LE+TE Sbjct: 532 LEKACMESIALSQLSGYDVPVSVNVSPRQFQQSNLVGNISRVLQETGLKPSLLELEITEG 591 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP 598 D + +L L+ G+++A+DDFG GY+ L ++K PID LKID+ FV GL Sbjct: 592 TLADTSPQFIKVLNDLKGLGIKLAIDDFGTGYSS---LGYLKHFPIDNLKIDRSFVMGLE 648 Query: 599 GD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D +++ AI+ L +L + ++AEGVETE QRD+L G QGFLF++PLP + Sbjct: 649 SDTANQAILKAIVALGHNLGINLVAEGVETERQRDFLLSIGCDEMQGFLFSQPLPFDQAG 708 Query: 656 ESYLEE 661 + L + Sbjct: 709 KLLLAQ 714 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 157/648 (24%), Positives = 273/648 (42%), Gaps = 34/648 (5%) Query: 42 TATQLESIARSVR------EPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQA 95 + E +A S+ P A + + + +IL + ++ + Sbjct: 207 YEQEPEQLAESMNLIHPEDRPAVEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESRGRI 266 Query: 96 LRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMST 155 + F +M+ + ++ + I + D+ R + Sbjct: 267 V--EFDEAGQPTLMIGTMLDITERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDA 324 Query: 156 LSTLVTIYLLLS------LILTVAISWCINRLILHPLRNIARE----LNAIPAKELVGHQ 205 ST+ L+ + S I + N LV Sbjct: 325 FSTITGYQADEIVGQNPRLLKSGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLVTEW 384 Query: 206 LALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQV 263 L++ L D G + L +R E + +++LPN+ L + L Q Sbjct: 385 LSISSL--RDTTGTASHYIGIFSDLSERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQA 442 Query: 264 VARKQTT----ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 + + AL+++ R L + +L+ + +LK + + + +G Sbjct: 443 LLTARRFERGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGN 502 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYS 378 +F + + A+ L Q++L +S + + SIG+++F + E + Sbjct: 503 EFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGEAMLR 562 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A +A A+ G+N F+ P+ A +RL+ ES + +AL +F + QPQV + SG Sbjct: 563 SADAALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDALARDEFCVHYQPQVSLDSG 622 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG-IML 497 ++ E LLR P I E GL++ +G WVL +C AW + G + L Sbjct: 623 HMIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPL 682 Query: 498 PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNA 557 ++VNLS Q ++ A + L + G L LE+TES IDD AVA+ L++ Sbjct: 683 HVAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSL 742 Query: 558 GVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSL 614 G++++LDDFG GY+ L ++ P D +KID+ FV + P ++++ +A I++ +SL Sbjct: 743 GIKLSLDDFGTGYSS---LAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSL 799 Query: 615 NLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 NL ++AEGVETEAQ +L QG+LF+RPLP E F L K Sbjct: 800 NLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLLLSCK 847 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 139/477 (29%), Positives = 235/477 (49%), Gaps = 17/477 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 + E L + + DD G + R L + +R E A ++ LP Sbjct: 454 DKRKNGEEYIKLLTINVIRDDD--GAIYRHVALFTDITERKKVEELIWRQANYDSLTKLP 511 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ + + LEQ + AL++I + ++ L + +ILL+ ++ + + Sbjct: 512 NRQMFHDRLEQEAKKAHRAGLSMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACV 571 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F VI + +++ + Q +L ++E ++ SIG++++ Sbjct: 572 RESDTVARLGGDEFIVILSELEDMASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLY 631 Query: 368 YGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D T + L+ A A + A++ G+N+ +F EAAQ R+ +D+ A+ QF Sbjct: 632 PNDATELDVLFKHADQAMYVAKYAGRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFR 691 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QP VEM+SG++ AE L+R Q P P I E GL+V +G WV ++ + Sbjct: 692 VYYQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQ 751 Query: 487 LAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 + W+ + +SVN S +Q H + E L + + ++I+E+TE +D Sbjct: 752 VVQWRRKFHRSFQISVNKSPVQFRHAESL-SWPEYLEQQHVSGDSIIVEITEGLLLDAEV 810 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSS 602 L R+AG++VA+DDFG GY+ L ++K ID LKID+ FV L D + Sbjct: 811 EVNKKLLRFRDAGIQVAIDDFGTGYSS---LSYLKEFDIDYLKIDQSFVRNLGPGTSDLA 867 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 + AII++A L ++IAEGVET Q + LA AG QG+L++RPLP E FE Sbjct: 868 LCEAIIVMAHKLGFKVIAEGVETSTQHELLAAAGCDYGQGYLYSRPLPPEEFERQLA 924 >UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8B4_NITMU Length = 1109 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 147/550 (26%), Positives = 259/550 (47%), Gaps = 28/550 (5%) Query: 131 ANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIA 190 A I L+ + D+ S T SL+ + + L +A Sbjct: 553 ATLDAIPDLLFELDADGCVHAWHSVRRTEFPTVSGESLVGKKVADFLPTGAVDIILSALA 612 Query: 191 R------------ELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YE 236 EL ++ +L++ R H D G +R L + + +R + Sbjct: 613 EAQEKGLSSGKQLELRLPGREDKWWFELSVSRKHVDSAAG--LRFIVLARDITERKASEQ 670 Query: 237 EQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQR 292 A ++ LPN+ALL + + + + + A++ + + + L Sbjct: 671 RILHLAHYDSLTGLPNRALLADRMRVAINRAARQAKRLAVLFVDLDRFKAINDSLGHDVG 730 Query: 293 EILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIE 352 + LL + E++++ + ++++ G +F V+ N ++ A + Q+++ +S+ IE Sbjct: 731 DHLLKVVAERMQTSIRSVDTVSRVGGDEFVVLLNEIETAEDAARVAQKIIDGLSQPYQIE 790 Query: 353 RIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLT 411 + +L SIG+ ++ + L A ++ +TA+ G N+ QF+ A +RL+ Sbjct: 791 KHELLLTGSIGICIYPDNGKEPNILLRNADASMYTAKEAGHNRYQFYSEDMTARAIERLS 850 Query: 412 EESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGL 471 E D+ A+E + + QPQ+E+ + +++ EVL+R + P P I E GL Sbjct: 851 LEHDLRGAVERGEMFLVYQPQIELGTSRVIGVEVLMRWRHPARGLISPVRFIPVAEDTGL 910 Query: 472 MVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGT 530 ++++G W L ESCR W ERG + +SVN+SA+Q + V + L + P Sbjct: 911 ILSIGEWGLRESCRQAQLWYERGLLNACISVNVSAVQFRQTDFVGIIENALQESGLAPTN 970 Query: 531 LILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKID 590 L LE+TES + A+ LR L GV+VA+DDFG GY+ L +++ +D LKID Sbjct: 971 LELELTESAVMQGAEPALNKLRELDALGVKVAIDDFGTGYSS---LAYLRQFTVDRLKID 1027 Query: 591 KMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFAR 647 + FV +PG+ ++ AAI+ + +L ++IAEGVETEAQ ++L QG+LFA Sbjct: 1028 QSFVRDVPGNNDAEAIAAAIVAMGLNLGFRIIAEGVETEAQAEFLQSVLCKEGQGYLFAW 1087 Query: 648 PLPIEIFEES 657 P+ FE Sbjct: 1088 PMTAIEFEAW 1097 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 133/477 (27%), Positives = 238/477 (49%), Gaps = 16/477 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLP 251 N E L++ + DD G + + + + E+ + ++ LP Sbjct: 477 NRRKNGESYPEILSISSIRDDD--GEIANYVAVFHDISDMKHKEEQLAHHLYHDGLTGLP 534 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L+++ L ++ A++ + + + AQ + LL + E+L ++ Sbjct: 535 NRVLVLDRLSMALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALY 594 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A+ G +F V+ V E + L + + + E I+ ++ SIGV ++ Sbjct: 595 RDEDTVARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLY 654 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D L A A + ++ KG+N F Q E +RLT ESD+ AL+ +F Sbjct: 655 PDDGQDPASLVKNADMAMYQSKAKGRNSYFLFTQQMSERIAQRLTLESDMRRALKEREFT 714 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QP+V++ SG++ E L+R +PDG P+ I E GL+V +G +VL+ SC+ Sbjct: 715 VYFQPKVDLASGEVSGLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKA 774 Query: 487 LAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 + Q G L ++VNLS +Q ++V ++ L R + L LE+TES + D Sbjct: 775 MQVLQGVGCSALTVAVNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQ 834 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSS 602 ++VA L L G+ +++DDFG GY+ L ++K+ PI LKID+ F+ + D+ Sbjct: 835 SSVAQLNRLVELGITISIDDFGTGYSS---LYYLKNFPISTLKIDRSFIRDITIDDSDAK 891 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 ++ ++++A+++ + ++AEGVET+ Q D LA G QG+ ++RPLP+E E L Sbjct: 892 IVETVVLMARTMGIGVVAEGVETKEQLDLLATFGCATVQGYYYSRPLPLEKIIEFLL 948 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 123/474 (25%), Positives = 224/474 (47%), Gaps = 16/474 (3%) Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNK 253 + + + D +V + + QR E+ +A ++DLPN+ Sbjct: 466 RKDHSNFPVEYVTSLIKEGD---KVVGEVITFKDITQRKQLEEKIKYHAYFDSLTDLPNR 522 Query: 254 ALLMEMLEQVVARKQ----TTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSP 309 LL++ L Q + + A++ + + + L + ++LL ++ ++L + + Sbjct: 523 VLLIDRLTQGLKYAKVNGEKLAVLYLDLDRFKLVNDSLGHSYGDLLLQSVAKRLSACVPE 582 Query: 310 RMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG 369 +++ G +F + ++ + + + S+ + ++ SIG+++F Sbjct: 583 DATVSRQGGDEFTIYLPNIKCENDILKVINCINASFSQPFNLIDNEIYIKTSIGISLFPK 642 Query: 370 DLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIW 428 + E L A +A + ++ FF + + E+D+ ALE + I+ Sbjct: 643 NGDTTETLIKNADTAMYKSKETPGTSYHFFSEGMDTRTFESIKLENDLYKALERDELIIF 702 Query: 429 LQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLA 488 QPQ+ + K+ E LLR + PD I E GL+V +G WVL+E+C+ L Sbjct: 703 YQPQINYKTNKIKGVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEWVLKEACKQLK 762 Query: 489 AWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 W +G L +SVNLS Q N+ + + +L + P L LE+TE+ + + Sbjct: 763 EWHNQGYPLISMSVNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLELTENLIVKNTEVT 822 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG-LPGD-SSMIA 605 + + L GV +A+DDFG GY+ L ++K+LPI LKIDK FV+ L D +++ Sbjct: 823 LKTMTQLNGLGVNLAIDDFGTGYSS---LGYLKNLPISTLKIDKSFVQEMLTDDAAAITN 879 Query: 606 AIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 II LAQ+L L++IAEGVET+ Q D+L + + QG+ F++P+ + Y Sbjct: 880 TIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFSKPMKAGEIMKKYF 933 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 149/527 (28%), Positives = 243/527 (46%), Gaps = 34/527 (6%) Query: 161 TIYLLLSLILTVAISWCINRLILHPLRN--IARELNAIPAKELVGHQLALPRLHQDDEIG 218 + +S +L A + I + I L + +P + + H A H D Sbjct: 448 LLGKDVSAVLPSATAGTIRQGIERALHQGDLQSVFLDLPVEGSMHHYEARIAPHGPD--- 504 Query: 219 MLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTT----AL 272 + + + + + E+ A ++ LPN+ +E L++ + R + T AL Sbjct: 505 ---KVVVVVRDITLQKHSEEKIRRLAYFDTLTGLPNRQSFLERLDRELLRARRTNHRMAL 561 Query: 273 MIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQ------------ISGYD 320 + + + + L + + LL T+ ++L+ L +A+ + G + Sbjct: 562 LFLDLDGFKRINDTLGHSAGDCLLQTVADRLQEKLRAGAFIARPALDESSLHFARLGGDE 621 Query: 321 FAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSR 379 F V+ V A + Q++ ++ I ++ SIG+A+F D A L Sbjct: 622 FTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEIAVTSSIGIALFPDDGADAATLLKH 681 Query: 380 AISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGK 439 A +A + A+ +G+N Q +D RL E DI LE +F ++ QPQV G Sbjct: 682 ADTAMYYAKEQGRNNWQLYDRTLTTRTTARLALEGDIRKGLERGEFRLFYQPQVSADDGT 741 Query: 440 LVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-P 498 +V E L+R Q P P I E GL+V +G WVL +CR + WQ+ G+ + Sbjct: 742 IVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTAACRQVRQWQQSGVPVPR 801 Query: 499 LSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 ++VN+SA QL + + ++ I L LE+TES +D + L LR G Sbjct: 802 VAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTESILMDPEAKRIKGLSRLRAMG 861 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLN 615 V ++DDFG GY+ L ++K PI LKID+ FV GLP D+ + AII +A+SLN Sbjct: 862 VHFSIDDFGTGYSS---LSYIKRFPIGTLKIDQSFVHGLPQDADDAGITTAIISMARSLN 918 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK 662 L+++AEGVET Q +L +A QG+LF+ PLP + E + Sbjct: 919 LEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDEMEAILRRGR 965 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 146/609 (23%), Positives = 258/609 (42%), Gaps = 35/609 (5%) Query: 76 IKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQP 135 + V L R+ + L ++ L E Sbjct: 341 LLAVASTVAVIVSLAFSSWIGRRFASYRGEIAQRNAALEAKNRELQLAARVFECGN---- 396 Query: 136 IAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELN- 194 ++ D+ +F+ + L + + + +N IAREL Sbjct: 397 --EAMMVLDADH--RFITVNSACAQLAGLDAAALRGRPAAQLLNDHDGAGWERIARELAE 452 Query: 195 ----------AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENA 242 + QL++ + + G + E A Sbjct: 453 QGAWSGEVTVRREDGPTLPAQLSVSAVL--NSAGGATHYVGALTDMSAHKQTEALLRHMA 510 Query: 243 MRFPVSDLPNKALLMEMLEQVVARKQTT----ALMIITCETLRDTAGVLKEAQREILLLT 298 ++DLPN++LL + + T AL+ I + ++ L + + LL Sbjct: 511 EYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFIDLDRFKNVNDSLGHSVGDALLRQ 570 Query: 299 LVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRP 358 ++L S+L +A+ G +F ++ + + A Q++ S +E +L Sbjct: 571 AAKRLASLLHGGDTIARPGGDEFVMLLAEITDRAVAANRAAQIIDAFSTPFRVEHYELSV 630 Query: 359 HCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDIL 417 SIG+A+ D A+ L A +A + A+ G+N +FF + ++RL E+ + Sbjct: 631 TPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRNTYRFFTDEMSLRVRERLELENLLR 690 Query: 418 NALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGH 477 A+ +F ++ QPQ ++ +++ E L+R + P+ P+ I E GL+V +G Sbjct: 691 QAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPERGLIAPERFIPLAEDTGLIVAIGR 750 Query: 478 WVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVT 536 VLE +C W+ G+ +P++VN S +Q+ H N + E+L + L +E+T Sbjct: 751 RVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGNFAETVAEVLAETGLPARLLEIELT 810 Query: 537 ESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEG 596 ES + D A L L++ GVR+A+DDFG GY+ L ++K +D LKID+ F+ Sbjct: 811 ESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSS---LAYLKRFQLDKLKIDRSFIND 867 Query: 597 L---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEI 653 L P D+++ AII +A+SL + +IAEGVET AQ +L G QG+LF+ P+P+E Sbjct: 868 LPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFLVDQGCAEGQGYLFSPPVPVES 927 Query: 654 FEESYLEEK 662 + Sbjct: 928 MTALLATAR 936 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 137/482 (28%), Positives = 235/482 (48%), Gaps = 21/482 (4%) Query: 193 LNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDL 250 + + EL ++++ + G + L +R E + ++ L Sbjct: 565 RHRTKSGELKPVEVSVTF-----DAGRAACFSLFVRDLSRRDEAQEHIRRLSHFDTLTGL 619 Query: 251 PNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSV 306 PN +L ++L Q + Q ++M I + + L + LL+ + + ++ Sbjct: 620 PNSSLFADLLRQAIGNAQRSGESLSVMYIDIDHFQHINDTLGHRIGDRLLVEIAGRFRNA 679 Query: 307 LSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 L LA++ G +F ++ + A + ++++ ++ + IE ++ SIG+AM Sbjct: 680 LCAENTLARLGGDEFLILLPH-AQVECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGIAM 738 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + D E L RA +A A+ G+N +FF P+ + L E+ + ALE ++ Sbjct: 739 YPADGEDFETLLQRADTATNRAKSDGRNTYRFFAPEMQLRSAHTLRLETALRRALERNEL 798 Query: 426 AIWLQPQVEMTS-GKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 + QPQ+++ G++ E L+R Q P+ P I E GL++ +G WV++ + Sbjct: 799 VLHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTAL 858 Query: 485 RLLAAWQERGIML-PLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 L AWQ G+ L + VNLSA Q N+ A + +L + L LE+TES +DD Sbjct: 859 LQLKAWQLAGLQLGQVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMMDD 918 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD--- 600 P AAVA++ L GVR+++DDFG GY+ L ++K ID LKID+ FV L D Sbjct: 919 PVAAVAMMDALHRDGVRMSIDDFGTGYSS---LNYLKRFRIDKLKIDQSFVRDLTQDPEG 975 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 +++ AI+ LA++L + IAEGVE Q +L +G QG+LF+RPLP + Sbjct: 976 EAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELAVWLRA 1035 Query: 661 EK 662 + Sbjct: 1036 WR 1037 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 237/500 (47%), Gaps = 20/500 (4%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL-- 231 R + L + N E+ L + + D+ G + + + Sbjct: 314 YYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTV--RDDEGEVSNYVAVFSDISQI 371 Query: 232 QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 + + A P++ LPN+ALL + L ++R + A++ + + ++ L Sbjct: 372 KDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLDLDGFKNVNDSL 431 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + LL + E+L L +++ G +FAV+ V + + ++ ++ Sbjct: 432 GHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSEVAEHLIAEIAR 491 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 L ++ SIG+A+F D A L A +A + ++ G+N F +AA Sbjct: 492 PLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSKALGRNTFSFHHEDMAQAA 551 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 +RL+ E + ALE +F +W QPQ+++ +G L AE LLR + P+ P + Sbjct: 552 HRRLSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGAEALLRWRDPERGLVSPAEFVPLA 611 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYR 525 E GL++ +G WVLEE+CR AW + G+ ++VN++A Q+ + +L+ Sbjct: 612 EETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNVAAPQIERGGFDQAVARVLSASG 671 Query: 526 IQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPID 585 + P L +E+TE + A + LR GV VA+DDFG GY+ L ++K+L + Sbjct: 672 LPPAALEVEITEGSLLRSAENARLAVAALRALGVGVAIDDFGTGYSS---LAYLKNLAVQ 728 Query: 586 VLKIDKMFVEGLPGDS---SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQG 642 LKID+ FV LP D+ ++ AII + +SL ++AEGVE AQ +L G +AQG Sbjct: 729 TLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGVEEPAQAAFLVSEGCTLAQG 788 Query: 643 FLFARPLPIEIFEESYLEEK 662 +LFA+P+P F E + Sbjct: 789 YLFAKPMPGAEFAEWLRTYR 808 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 149/485 (30%), Positives = 231/485 (47%), Gaps = 24/485 (4%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLP 251 N E+ L + + D G L R ++ A ++ LP Sbjct: 573 NRRKNGEVFPEWLTISAV--KDPAGQATHYVATFTDLSTRKSAEDQIKSLAFYDTLTGLP 630 Query: 252 NKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL++ L+Q +A ++ AL+ I + + + LL + ++L L Sbjct: 631 NRRLLLDRLKQALASGARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRLSHYL 690 Query: 308 SPRMILAQISGYDFAVIAN-----GVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSI 362 +A+ G F V+ V+ A G+++ +S+ I R SI Sbjct: 691 RAGDTVARPGGDSFVVLLEALSTNSVEAATEAENTGEKIRLALSQPYQIADHAHRSTASI 750 Query: 363 GVAMFYGDLT--AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL 420 GV +F ++ RA A + A+ G+N ++FFDPQ A E+D+ A+ Sbjct: 751 GVTLFDDRQQEGIDEPLKRAELAMYQAKTAGRNTLRFFDPQMQTAVMAMAALEADLREAV 810 Query: 421 ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL 480 ++QF ++ Q QV ++ E L+R Q P P I E GL++ +G WVL Sbjct: 811 RSNQFLLYYQAQVSGE-RQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLGQWVL 869 Query: 481 EESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTES 538 E +C LAAW Q L ++VN+SALQ + VA +L L R P L LE+TES Sbjct: 870 ETACAQLAAWASQPERAHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKLELTES 929 Query: 539 RRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL- 597 + D +A + L+ GV +LDDFG GY+ L ++K LP++ LKID+ FV + Sbjct: 930 LLVHDAEDVIAKMITLKEQGVGFSLDDFGTGYSS---LSYLKRLPLNQLKIDQGFVRDIL 986 Query: 598 --PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFE 655 D+++ ++ LA +L L +IAEGVETEAQRD+LA G QG L++R LPI+ FE Sbjct: 987 HDANDAAIAKMVVALADTLGLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPIDAFE 1046 Query: 656 ESYLE 660 + Sbjct: 1047 AFMRQ 1051 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 138/470 (29%), Positives = 225/470 (47%), Gaps = 17/470 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR--HYEEQNENAMRFPVSDLPN 252 + AL + + + + + +R + E A ++ LPN Sbjct: 599 ERADGSPFWCECALAPVRAAGD----AHVVCVVKDVTERVLYLRELERQAKYDGLTGLPN 654 Query: 253 KALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + LL + LEQ + + + I + + + Q + LL +L +VL Sbjct: 655 RYLLDDRLEQAIVAARRHERLLGVAFIDLDHFKVVNDNVGHRQGDELLRQAASRLAAVLR 714 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 A+ G +F V+ + + A + ++ ++E ++ CSIGV+++ Sbjct: 715 DGDTAARQGGDEFVVLLPDLGDERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYP 774 Query: 369 GDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 D + L A A + A+ G+N ++FF + + RL E + +ALEN + + Sbjct: 775 RDGGDGDTLLKHADIAMYQAKAAGRNVVRFFTAEMNIQVRDRLQLEGALRSALENGELHL 834 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 QPQV+ SG+++ AE LLR Q P+ P I E GL+ +G WVL +CR Sbjct: 835 AFQPQVDGGSGQVIGAEALLRWQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQA 894 Query: 488 AAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 W++ G L ++VN+SA Q P++ A + E+L + P L LE+TES + D A Sbjct: 895 RQWEQAGRRLRIAVNVSARQFRSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQA 954 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMI 604 +L L+ GV +ALDDFG GY+ +++ PID LKID+ FV + +++ Sbjct: 955 EEMLHRLKQLGVSLALDDFGTGYSSF---AYLQRFPIDTLKIDQSFVRSMVAGVRGEAIV 1011 Query: 605 AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 AII LA SL +++IAEGVET Q+ L + G QG+LF RP+P F Sbjct: 1012 VAIIALAHSLGMRVIAEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAEF 1061 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 132/477 (27%), Positives = 230/477 (48%), Gaps = 16/477 (3%) Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNK 253 E + ++ + +D G S L + H + + A ++ LPN+ Sbjct: 222 RRDGETLWAHVSTSWHYNED--GTPSYSVALISNITPHHQAKQKIRQLAYFDGLTGLPNR 279 Query: 254 ALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSP 309 L +E + + + + II + + + LL T+ ++L +S Sbjct: 280 QLFLEHCNSSLTQARRNRSPLGVCIIDIDRFKGVNDTYGYESGDALLKTVSQRLSDCMSR 339 Query: 310 RMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYG 369 +LA++ +FA + V L Q++L ++E + I +L +G+A+F Sbjct: 340 EDVLARLGSDEFAAVIASVGSQDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGIALFPV 399 Query: 370 DL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIW 428 D AE L A +A A+ G N +FF A +R+ E+ + AL+ Q A+ Sbjct: 400 DGVDAEALLKNAATAMHQAKQHGSNNFRFFSKGMNRMAWERIEIETGLRRALDLQQLALH 459 Query: 429 LQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLA 488 QPQV++ +G ++ E LLR + P+ P I E GL++ +G+WVLE +CR Sbjct: 460 YQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQAK 519 Query: 489 AWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAA 547 AW G L ++VN+SA Q + + ++ R I P L +E+TES ++ Sbjct: 520 AWHRAGFPSLRMAVNISARQFKQAGFIDRLDAIIQRSGINPELLEMELTESLIMEKSDET 579 Query: 548 VAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMI 604 + L +++ G+++A+DDFG GY+ L ++K PID +K+D+ FV +P D+++ Sbjct: 580 LMTLVDIKSRGIKLAIDDFGTGYS---MLSYLKHFPIDRIKVDRSFVRDIPENTDDAAIT 636 Query: 605 AAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 AII +A SL +++IAEG+ET Q +L QG+ F RP+P+E E ++ Sbjct: 637 EAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVPVETAAEILAQQ 693 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 134/479 (27%), Positives = 233/479 (48%), Gaps = 18/479 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPN 252 + G Q++ + D G ++ + + Q + + ++ + A ++ LPN Sbjct: 526 RHRSGRDYGVQISAAPIAGRD--GRVLGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPN 583 Query: 253 KALLMEMLEQVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + L + + Q + A++ + + + L A + LL + ++L L Sbjct: 584 RVLFQDRVHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALR 643 Query: 309 PRMILAQISGYDFAVIANGVQEPW--HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAM 366 + ++ G +F V+ + + + + +++L +++ + ++ S+G+A+ Sbjct: 644 ASDTICRLGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLGGTEVNVGASLGIAL 703 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 F GD + L RA +A + ++ +G+N+ FF +AA RL E+D+ AL QF Sbjct: 704 FPGDGEDPDTLMKRADAAMYRSKREGRNRYHFFSKAVDDAASARLQLEADMRRALAAGQF 763 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 + QP V + V+ E LLR + P I E GL+V +GHWVL ++C Sbjct: 764 IVHYQPVVHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACE 823 Query: 486 LLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 L AW + + ++VN+S +QL + V + ++L + L E+TES + DP Sbjct: 824 QLRAWSGTALGGISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDP 883 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDS 601 A + +LR L+ GVR+A+DDFG GY+ L H+K P+D LKID FV L D Sbjct: 884 EATLEMLRRLKGLGVRIAIDDFGTGYSS---LGHLKRFPVDTLKIDHTFVRDLEADADDR 940 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++ AI+ +A+SL L ++AEGVETEAQ LA QG+LFARP + + Sbjct: 941 ELVRAILAMARSLRLHVVAEGVETEAQAAILAAMECPAFQGYLFARPAGAAVTAAWLQD 999 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 137/478 (28%), Positives = 237/478 (49%), Gaps = 16/478 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL--QRHYEEQNENAMRFPVSDLP 251 + + +++ + E GM+ + + E + A ++ L Sbjct: 531 DRRKDGGIYPKWMSISVI--RGEDGMIRYHVAHFTDVSSERAAEERLHHMAHHDVLTGLL 588 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ L L+Q +A + A++ + + + L + LL+ + +L+ + Sbjct: 589 NRLSLKGRLDQALAAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGV 648 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 ++A++ G +F ++ +GV+ + ++++ + + I L SIG+A++ Sbjct: 649 RDSDVVARVGGDEFVIMLSGVEHTSAVAMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIY 708 Query: 368 YGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D + L A +A + A+ G+N QFFD + EAA +RL E + AL N +F Sbjct: 709 PTDGEDGDILMKNADAAMYHAKMAGRNNFQFFDAKMNEAALERLNTEHALRRALANQEFC 768 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QP +++ S ++ S E L+R P+ LP I E GL+ +G WVL +CR Sbjct: 769 LYYQPVIDLASNRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQ 828 Query: 487 LAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPH 545 LA + GI + + VN+SA+Q+ + N+ ++ Y I P LI E+TES ++ P Sbjct: 829 LADFAAAGISGIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPT 888 Query: 546 AAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSS 602 V IL L GV VA+DDFG GY+ L +++ PI+ LK+D+ FVE + Sbjct: 889 ETVRILDLLNAMGVSVAIDDFGTGYSS---LSYLRMFPINHLKLDRSFVEQIGEEIDGCV 945 Query: 603 MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 + A I LA SL L+++AEGVET+AQ D+L G + QGFLF+RP+P + + Sbjct: 946 ICDATIGLAHSLELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPADEVLAFIRQ 1003 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 143/498 (28%), Positives = 234/498 (46%), Gaps = 22/498 (4%) Query: 177 CINRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLL- 231 + + L + N E+ L++ + D G + L Sbjct: 258 AFYQHMWRELIEKGQWRGEIWNRRKNGEVYPEWLSISGVS--DARGQTSYYVGVFTDLSQ 315 Query: 232 -QRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGV 286 ++ + A P++ LPN+ LL LE + + + I + R Sbjct: 316 LKQSEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNES 375 Query: 287 LKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMS 346 L + LL+ + ++ S L LA+ G +F +I + +P A +++L + Sbjct: 376 LSYQAGDQLLVMVSKRFLSCLRVDDTLARPGGDEFVLIQEALADPQEATETARELLASLD 435 Query: 347 ERLPIER-IQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQME 404 + ++ ++ SIG+ +F GD T L A +A + A+ G+N+ F+ Q Sbjct: 436 QPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNA 495 Query: 405 AAQKRLTEESDILNALENHQFAIWLQPQVEMTSG-KLVSAEVLLRIQQPDGSWDLPDGLI 463 A RL E + A+EN + ++ QPQ ++ ++ AE L+R + +G PD I Sbjct: 496 DALARLQMEMALRQAVENRELLLYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPDQFI 555 Query: 464 DRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLT 522 E GL+ +G WV++E+CR L W+++G L ++VN+SA Q N+ + + L Sbjct: 556 PLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALR 615 Query: 523 RYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSL 582 ++ I LE+TES ++ P A +L GV +ALDDFG GY+ L ++ Sbjct: 616 KHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVGIALDDFGTGYSS---LAYLSRF 672 Query: 583 PIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGI 639 PI VLKID+ FV L + + +II LA + LQ++AEGVETE QR +L G + Sbjct: 673 PITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDL 732 Query: 640 AQGFLFARPLPIEIFEES 657 AQGFLF+ PLP E F E Sbjct: 733 AQGFLFSPPLPAEQFAEF 750 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 141/501 (28%), Positives = 240/501 (47%), Gaps = 16/501 (3%) Query: 174 ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 + I+ + E + L + G + R + L +R Sbjct: 495 LLSRISDFFHSKADRFSAEYRVRCKDDSWKWILTRGMVAHRSTDGRVTRMIGTHTDLSER 554 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E A ++ LPN+ L + LEQ + + ALM+I + ++ + Sbjct: 555 KLAEETIRRQANYDSLTQLPNRRLFRDRLEQTIRLAKRDQSSFALMLIDLDHFKEVNDTM 614 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSE 347 + LL+ ++++ + +A++ G +F VI V +P + + Q ++T ++ Sbjct: 615 GHDAGDFLLVDAAQRIQHCVRESDTVARMGGDEFVVILPDVNDPDNIERIAQNIITKLAA 674 Query: 348 RLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAA 406 + + SIG+ ++ D + E L A A + A+H G+N++ +F P E A Sbjct: 675 PFVLGEEKAFISASIGITLYPSDADSMETLLKNADQAMYVAKHLGRNRMSYFTPVLQENA 734 Query: 407 QKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRI 466 QKR+ +D+ +AL ++Q ++ QP VE+ +G + AE L+R P P I Sbjct: 735 QKRMRLVNDLRDALSSNQLRVFYQPIVELATGDIHKAEALIRWLHPTRGMVSPSEFIPLA 794 Query: 467 ECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPN--MVADMLELLTR 523 E G+++ +G WVL ++ + Q +SVN S +Q + N A+ L L + Sbjct: 795 EETGMIIEIGDWVLRQAMHQVKRLQASHHKGFQISVNKSPVQFHNDNPLKAAEWLGELEQ 854 Query: 524 YRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLP 583 + +L++E+TE +DD L R+AG++VA+DDFG GY+ L ++K Sbjct: 855 NGLLASSLVVEITEGVLLDDDGNVKDRLLASRDAGIQVAIDDFGTGYSS---LAYLKKFD 911 Query: 584 IDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIA 640 ID LKID+ FV L D ++ AII++A L L++IAEGVETE QRD L +AG A Sbjct: 912 IDYLKIDQTFVNNLGNQSDDMALCEAIIVMAHKLGLKVIAEGVETEQQRDLLKQAGCDYA 971 Query: 641 QGFLFARPLPIEIFEESYLEE 661 QGFLF++ +P E E+ + Sbjct: 972 QGFLFSKAIPAEELEDLLRQN 992 >UniRef50_A3Y8Y9 C-di-GMP phosphodiesterase A-related protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8Y9_9GAMM Length = 684 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 155/681 (22%), Positives = 309/681 (45%), Gaps = 28/681 (4%) Query: 1 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA 60 +R+ ++K + L+ +F + F ++ + + SI +P + A Sbjct: 3 IRIKDRASVKHAQTIIIASLILSLVFGVLQAFLDLESEKQQIHNRFSSILLLSHDPAAQA 62 Query: 61 ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALR---KSFIPERPVPVMVTRLFELP 117 + + P A+ ++ + + +A+++ Q + + LF Sbjct: 63 AYQLNSPLAKQVIKGLLSHPDIIQAEIMDDFDSQLASDVDQPSDENEFTQFLANYLFSKQ 122 Query: 118 VQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWC 177 +S+ + + N + L + DS + K + + + + L+ +LIL++ + Sbjct: 123 GHLSIPLIFSPKNIN---VGSLSITLDSQAVAKSFIGRATNVFLLSLIKNLILSLILLAF 179 Query: 178 INRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE 237 +++ HPL + +++I P + DE G+L++ + + + + Sbjct: 180 FYKVLTHPLTKLTIWISSIK--YNNKAIDNPPIKIKKDEFGLLIKQFMALWKERESAEAQ 237 Query: 238 QNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQRE 293 E A ++ L N+ L ++L + + Q AL + + + L A + Sbjct: 238 LREYAYFDLLTGLSNRRHLSDILHNAIIKIQHQPTIGALFYMDLDRFKHINDSLGHAVGD 297 Query: 294 ILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH-----AITLGQQVLTIMSER 348 LL+T+ ++L + +A++ G +F ++ + + A L ++LT ++E Sbjct: 298 ALLVTIGKRLSEFKNDDTSVARLGGDEFVILIPDIADTEEKAHEAATQLANKILTSIAEP 357 Query: 349 LPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQ 407 + L SIG+++ D T + + A A + A+ +G N F++ Q A+ Sbjct: 358 HTLIGHLLYTSASIGISIIRQDSNTGQDVLRHADIALYKAKAEGGNTYHFYENQLHIQAE 417 Query: 408 KRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIE 467 +RL+ E + +A+EN++F + Q Q G ++ AE L R + P P I E Sbjct: 418 QRLSIEQGLHSAIENNEFYLAYQAQCN-KDGDIIGAECLARWKHPVLGEISPGDFIPISE 476 Query: 468 CCGLMVTVGHWVLEESCRLLAAWQERGIM---LPLSVNLSALQLMHPNMVADMLELLTRY 524 + +G WVL+ + + W +G+ L++N+S +Q PN V + ELL Sbjct: 477 ETRQIYQLGDWVLKTAFLQVTKWLHQGLPHKFTRLAINISPIQFQDPNFVERVQELLVEC 536 Query: 525 RIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPI 584 + P + LE+TES D H A + L++ G+ ++LDDFG GY+ L+H++ L + Sbjct: 537 KCPPQLIELEITESCLFKDEHLAKLKVEQLKDMGLSLSLDDFGTGYSS---LRHLRELKL 593 Query: 585 DVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQ 641 DV+KID+ + L D + +I+ LAQ LN++++AEGVE + + L + G Q Sbjct: 594 DVIKIDQSLIRDLHLNEIDKDITDSILSLAQKLNMKVVAEGVENQEEMSALLELGCEFYQ 653 Query: 642 GFLFARPLPIEIFEESYLEEK 662 GF F++P+ E FE+ E++ Sbjct: 654 GFYFSKPINAEAFEKLVFEDR 674 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 128/451 (28%), Positives = 215/451 (47%), Gaps = 13/451 (2%) Query: 218 GMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TA 271 G + +Y + + + R + E + A ++ LPN+ALL + L Q +AR + A Sbjct: 264 GQFLGTYGIARDVTDRKHAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGNEEVA 323 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 ++ + + + L + + LL + ++L++ L LA++ G +F ++ + + Sbjct: 324 VLFLDLDRFKVVNDSLGHSVGDQLLQQVAQRLRACLREGDTLARLGGDEFTLLLPAIPDR 383 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISAAFTARHK 390 + Q+ + + + + +L SIG+A+F E L A A + + Sbjct: 384 PAVERVAQKCIDALEQPFMVHNHRLFLGVSIGIALFPEHGETLETLIKHADVAMYHVKEH 443 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 GK FFD L E+ + ALE H+F + QPQV++ SG++ E L+R Q Sbjct: 444 GKGHYTFFDQAMGSRIDHHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTGMEALIRWQ 503 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMH 510 P+ P I E GL++ +G W+L +C L W + L L+VNLS LQ+ Sbjct: 504 HPETGEVSPREFIPVAEQTGLILPIGEWLLRSACEELLRWPDGNEGLRLAVNLSPLQVHQ 563 Query: 511 PNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGY 570 + V + + L LE+TE+ + D + V LR L GV + +DDFG GY Sbjct: 564 RDFVDRVRAICDETGFPLRRLDLEITENLLMRDVESVVEKLRTLSRLGVTITIDDFGTGY 623 Query: 571 AGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS---MIAAIIMLAQSLNLQMIAEGVETEA 627 + L +++ LPI LKID+ FV + + ++ II +A L L ++AEGVET+ Sbjct: 624 SS---LGYLQRLPIHALKIDQSFVHAIRENEEKGTLVETIIAMAHGLGLNVVAEGVETKR 680 Query: 628 QRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 Q D+L + G QGF F+ PL + Sbjct: 681 QLDYLRRLQCGRMQGFYFSYPLSGHEAVDLL 711 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 146/459 (31%), Positives = 230/459 (50%), Gaps = 19/459 (4%) Query: 214 DDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVV--ARKQT 269 DE +N + +R E ++ A P++ LPN+ LL + L+ + Q Sbjct: 587 RDENDQPDAILAINTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQVRHGQV 646 Query: 270 TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQ 329 AL++I + + L A ++LL + ++L++ L LA++ G +F ++ G+ Sbjct: 647 GALLLIDLDNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIVLEGLS 706 Query: 330 -EPWHAITLG----QQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYSRAISA 383 P A +L +++L + + SIG+ +F T ++L RA A Sbjct: 707 ASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRADLA 766 Query: 384 AFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSA 443 + A+ G+N ++FFDP R E D+ AL F + Q QV+ G + A Sbjct: 767 MYQAKAHGRNALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDAR-GCVSGA 825 Query: 444 EVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSV 501 E LLR Q P W P I E GL++ +G WVL+ +C L AW + M L L+V Sbjct: 826 EALLRWQHPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAV 885 Query: 502 NLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRV 561 N+SA Q + A +L + R P L LE+TES +D+ + + L+ G+ Sbjct: 886 NVSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGF 945 Query: 562 ALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQM 618 +LDDFG GY+ L ++K LP+D +KID+ FV + D+S+ +I+ L QSLNL++ Sbjct: 946 SLDDFGTGYSS---LAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEV 1002 Query: 619 IAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 +AEGVET+AQ +LA+ G QG+LF RP P FE Sbjct: 1003 VAEGVETDAQHAFLAEHGCQAYQGYLFNRPQPARQFEAW 1041 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 147/483 (30%), Positives = 240/483 (49%), Gaps = 38/483 (7%) Query: 213 QDDEIGMLVRSYNLNQQLLQRHYEE----------------QNENAMRFPVSDLPNKALL 256 + D G L + + + + + A P++ LPN+ + Sbjct: 234 ERDSSGRLTSVLAIGRDITELYESRAALKRANAQLENMNDLLQSQATSDPLTGLPNRRFM 293 Query: 257 MEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMI 312 ++ L+ +A AL+ I + + L + LL + +L++ + Sbjct: 294 LDRLKHALASSSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAHRLETCVREGDT 353 Query: 313 LAQISGYDFAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 +A++ G +F V+ + E +G+++L +++ + + + R SIG +F Sbjct: 354 VARLGGDEFVVMLEDLSEKDLEAAAQTEAVGEKILAALNQPYQLGKHEYRNTPSIGATLF 413 Query: 368 YGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 + ++L +A A + A+ G+N ++FFDPQ E R T E+++ ALE HQF Sbjct: 414 NDHQQSLDELLKQADIAMYQAKRAGRNALRFFDPQMQETINSRATLENELRKALELHQFY 473 Query: 427 IWLQPQVEM----TSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEE 482 ++ Q QV+ S + AE L+R P+ P I E GL+V +G WVL+ Sbjct: 474 LFYQVQVDSVQEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAEETGLIVPIGLWVLDT 533 Query: 483 SCRLLAAWQERGIM--LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR 540 +C L WQ + L L+VN+SA Q P+ VA + + R+ I P L LE+TES Sbjct: 534 ACAQLKTWQHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGIDPKLLKLELTESLL 593 Query: 541 IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL--- 597 +++ +A + LR G+R +LDDFG GY+ LQ++K LP+D LKID+ F+ L Sbjct: 594 LENIQDTIATMNALREIGIRFSLDDFGTGYSS---LQYLKQLPLDQLKIDQSFICDLVSD 650 Query: 598 PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEES 657 D +++ II +AQSLNL +IAEGVETEAQR L + G QG+LF++P+PI FE Sbjct: 651 SSDRAIVRTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHHQGYLFSKPVPINQFEAQ 710 Query: 658 YLE 660 Sbjct: 711 LRR 713 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 121/460 (26%), Positives = 219/460 (47%), Gaps = 16/460 (3%) Query: 215 DEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQT--- 269 D+ G + + + E +A ++ LPN++L M+ LE + R + Sbjct: 276 DKQGQALGLEGFITDISKLKQAETQLRHDAFYDKLTGLPNRSLFMDRLEYCIKRVKRHPD 335 Query: 270 --TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANG 327 A++ + + + L A + LL+ + E+L + + LA++ G +F V+ G Sbjct: 336 QIFAVLFLDLDRFKVVNDSLGHAAGDQLLVEIAERLTACVRESDTLARLGGDEFTVLLEG 395 Query: 328 VQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY-GDLTAEQLYSRAISAAFT 386 +++ A+ + ++ ++ + ++ S GVA+ G EQL A +A + Sbjct: 396 IKDLSDALLVCGRIQQSLNCPFNLNGREVLITVSTGVALSTMGYDDPEQLLHNADAAMYR 455 Query: 387 ARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVL 446 A+ GK Q + F A +L E D+ A+E +F + QP + + +V E L Sbjct: 456 AKALGKAQWEVFTADMHSNASAQLQLEVDLRRAIERQEFQLHYQPIFHLETAAIVGFEAL 515 Query: 447 LRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG---IMLPLSVNL 503 LR P P I E GL++ + WVL+E+CR L+ WQ + + L +SVN Sbjct: 516 LRWHHPLRGLISPVEFIPVAEETGLILPISWWVLQEACRQLSRWQTQFPLEVPLFVSVNF 575 Query: 504 SALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL 563 S+ Q ++ + ++L + P +L LE+TES +++ A A L ++ G+++ + Sbjct: 576 SSKQFSEVGLIPQIEDILHTTGLAPQSLKLEITESAIMENAEATAAKLLEIKALGIQLGI 635 Query: 564 DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVE--GLPGDSSMIAAIIMLAQSLNLQMIAE 621 DDFG GY+ L ++ P+D+LK+D+ FV + ++ I ML+Q+L ++ +AE Sbjct: 636 DDFGTGYSS---LSYLHRFPVDILKVDRSFVSAMDSHENLQIVHTITMLSQNLGMRAVAE 692 Query: 622 GVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 GVET Q L AQG+ F++P+ E Sbjct: 693 GVETAEQAAQLRAMNCQYAQGYFFSKPIDASSMEHLLAHH 732 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 136/461 (29%), Positives = 232/461 (50%), Gaps = 21/461 (4%) Query: 211 LHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVA--- 265 + + D +R ++ +R E A P++ LPN+ LL + L+Q +A Sbjct: 353 VVEWDAEENPLRMVGGFYEVTERKKAEEAIQNLAFYDPLTQLPNRRLLQDRLQQEMAVTE 412 Query: 266 RKQTT-ALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVI 324 R + ALM I + + L + LL + +L+ + +A+I G +F +I Sbjct: 413 RSKHVCALMFIDLDDFKTLNDTLGHDTGDKLLRQVATRLRENVREFDTVARIGGDEFVLI 472 Query: 325 ANGVQE-----PWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA-EQLYS 378 + + HA + Q+VL ++++ ++ SIGV +F G E+L Sbjct: 473 LPSLDDDWKDAATHAELVAQKVLRVLNKPYLLDSTPYHSTPSIGVKLFSGHQETLEELLK 532 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A A + A+ KG+N ++F+D E + E+ + A+ QF ++ QPQ+ ++G Sbjct: 533 HADLAMYQAKAKGRNTVRFYDTTMQEVVNAKSVMEASMRQAITGQQFVLFYQPQIN-SNG 591 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW--QERGIM 496 +++ AE L+R + P P+ I E G ++++G WVL+ +C L W Q Sbjct: 592 QIIGAEALVRWRHPQKGLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQPATAQ 651 Query: 497 LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRN 556 + ++VN+SA Q ++V ++ ++ + P L LE+TES + D V ++ L+ Sbjct: 652 ITMAVNVSARQFHQIDLVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKK 711 Query: 557 AGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQS 613 GV +LDDFG GY+ L ++K LP+D LKID+ FV + D+++ A+I LA+S Sbjct: 712 LGVSFSLDDFGTGYSS---LAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKS 768 Query: 614 LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIF 654 + +IAEGVE Q L G + QG+LF RP+PIE F Sbjct: 769 MEFNVIAEGVENIEQHQMLIDMGCRVFQGYLFGRPVPIEEF 809 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 133/482 (27%), Positives = 241/482 (50%), Gaps = 18/482 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLP 251 N ++ +++ + D+ + + + Q E+ + + P++DLP Sbjct: 810 NRRKDGQVYPELMSMSAVC--DDQQEVSHYIAVFTDISQAKESQEKLDYLSWHDPLTDLP 867 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N++L L+Q V + A++ + +D + LL + ++L+S L Sbjct: 868 NRSLFCTHLDQAVKHAERKHHSFAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCL 927 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERI--QLRPHCSIGVA 365 +LA++ G +F ++ V + + +++L + + + + +++ S+G+A Sbjct: 928 RESDMLARLGGDEFVLLLEDVADSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIA 987 Query: 366 MFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQ 424 ++ A +L RA SA + A+ G+ + +++ + E AQ+R+ + ALE + Sbjct: 988 VYPEHGRDALELLQRADSALYRAKQHGRARFAYYNEEMTEQAQERVQLSFHLRQALEKKE 1047 Query: 425 FAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESC 484 FA++ QPQV++ +G++V AE L+R P+ PD I E G + ++G W+L + C Sbjct: 1048 FAVYYQPQVDLGTGQIVGAEALMRWNSPELGLVTPDRFIPLAEEIGCICSMGTWILRQVC 1107 Query: 485 RLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 AW + G L L+VNLSA+Q ++ + E L L LEVTES + Sbjct: 1108 EQGKAWLDAGYPPLTLAVNLSAVQFAEEDIACRLKETLQETGYPAEYLELEVTESTLMHK 1167 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSS- 602 + +L+ L GVR+ALDDFG GY+ L ++K P+ +LK+DK F++ LP D++ Sbjct: 1168 EQQTIDLLKSLNELGVRLALDDFGTGYSS---LAYLKYFPLHLLKVDKSFIDDLPADAND 1224 Query: 603 --MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 M+ AI+ + L ++AEGVET AQRD LA+ G QG+ + P+P F Sbjct: 1225 CKMVTAIVQMGHGLGFDLLAEGVETVAQRDCLAQLGCDYYQGYYCSPPVPACEFAALRQS 1284 Query: 661 EK 662 +K Sbjct: 1285 QK 1286 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 138/454 (30%), Positives = 231/454 (50%), Gaps = 13/454 (2%) Query: 216 EIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQ----TTA 271 E+ V + + Q QR E A +++LPN+ LL E + + + Q A Sbjct: 304 ELQETVGNLHREIQDRQRDQERIYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLA 363 Query: 272 LMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEP 331 +M + + + L + LL+ + ++L++ + R +A++ G +F ++ G Sbjct: 364 VMFLDLDNFKHVNDSLGHRIGDALLVEIAQRLRTTVRQRDTVARLGGDEFVLLLPG-ANA 422 Query: 332 WHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHK 390 A + ++ + + I+ +L S+G+A+F E L A +A + A+ Sbjct: 423 QGAARVAAKMQEAALQPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKAD 482 Query: 391 GKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ 450 G+N +FF P + + L + + ALE +Q ++ QPQV + +G++ E LLR Sbjct: 483 GRNSFRFFTPTMQAQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWH 542 Query: 451 QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLM 509 P+ P I E G ++ +G WVL + L W +G+ L ++VNLSA+Q Sbjct: 543 HPELGAVSPAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFR 602 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 P ++ + LL Y +QP L LE+TE+ + DPHAA+A + L GVR+++DDFG G Sbjct: 603 QPQLLELVDRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTG 662 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L H+K I LKID+ FV L D ++++AII +AQ+L ++ AEGVET Sbjct: 663 YSS---LSHLKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETA 719 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 Q +L + G AQGF F+RPL ++ L+ Sbjct: 720 HQLTFLREQGCDEAQGFYFSRPLGAPHLQQYLLQ 753 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 149/589 (25%), Positives = 265/589 (44%), Gaps = 28/589 (4%) Query: 94 QALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPAN-PQPIAYLVLQ---ADSFRMY 149 A E V + R + Y + AN PQ IA + + D+ + + Sbjct: 243 GADGLPAYYEGTVVDITDRKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAF 302 Query: 150 KFVMSTLSTLVTIYLLLSLILTV-AISWCIN-RLILHPLRNIARE-LNAIPAKELVGHQL 206 + + + + + + + I+ +S C N R + + + RE + L+ + Sbjct: 303 EALFGYRTADIQGFGMRAFIVPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVSM 362 Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVV 264 + G + Q + +R E+ A ++ LPN++L + LE+ + Sbjct: 363 IGFPIEI---AGETQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERAL 419 Query: 265 ARKQT-----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGY 319 R + A+++I + L + LL+ + +L + +A++ G Sbjct: 420 TRARRRGDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGD 479 Query: 320 DFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGD-LTAEQLYS 378 +FAVI + +T+ +++ + + + + P SIG+ + D A+ L Sbjct: 480 EFAVILEEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPEASIGIVLHTRDYAAADDLLR 539 Query: 379 RAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSG 438 A A + A+ +G+ FD + + + ++ E+D+ ALE + + QP V++ Sbjct: 540 DADIAMYRAKEQGRAS-MIFDRKMHQEILEAISLETDLRQALEAGELLLHYQPIVDVKDS 598 Query: 439 KLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ---ERGI 495 ++V E L+R PD P I E GL++ +G +V++E+CR L AWQ Sbjct: 599 RIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAA 658 Query: 496 MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 L +SVN+S Q + +V + ++L + P L LE+TES + D L L+ Sbjct: 659 DLSVSVNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLK 718 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQ 612 GV++A+DDFG GY+ L +++ LPID LKID+ F+ G D ++ +II LA+ Sbjct: 719 ALGVKIAIDDFGTGYSS---LSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLAR 775 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 SL L +IAEGVE Q D L A AQGF+F+RP+ + Sbjct: 776 SLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSRPVEATAAGRLIRQH 824 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 144/484 (29%), Positives = 248/484 (51%), Gaps = 14/484 (2%) Query: 189 IARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVS 248 ++RE + L H++A P + + I M + + +R + + A ++ Sbjct: 292 LSRERKVLGTFALYAHEVATPCEQEQELIAMAAHLAGIAIE-RKRAEDRISFLAHHDALT 350 Query: 249 DLPNKALLMEMLE---QVVARKQTTALM-IITCETLRDTAGVLKEAQREILLLTLVEKLK 304 LPN+ L E ++ + + + A++ + + + L A + LL + +++ Sbjct: 351 GLPNRVLFEEQVDGMLEEIRERDQCAVLAFLDLDNFKLINDSLGHAAGDELLKAVAGRMR 410 Query: 305 SVLSPRMILAQISGYDFAVIANGVQEPWH-AITLGQQVLTIMSERLPIERIQLRPHCSIG 363 + + + ++ G +F ++ NG+ + ++ + + + ++ L ++ L+ CS+G Sbjct: 411 ASVRKADFVVRVGGDEFIILLNGLPKERDIVLSRLEDIRSAIAMPLQLQGRSLQVSCSMG 470 Query: 364 VAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALEN 422 VA F TA +L + A A + A+ G++ IQ F + A +RL + ++ AL Sbjct: 471 VACFPNQGRTAGELLANADMAMYRAKELGRDNIQVFTEEMAARAHERLQWQEELREALAG 530 Query: 423 HQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEE 482 +F + QPQ+ + +G++ +AE LLR P P I E GL+V +G W L Sbjct: 531 EEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRA 590 Query: 483 SCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRI 541 +CR L AWQ+ G+ L +SVN+SA Q N + + E+L ++ L LE+TES + Sbjct: 591 ACRQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKETGLEARYLELELTESLIM 650 Query: 542 DDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP--- 598 D A+A + L GV +A+DDFG GY+ L +K P+ LKID+ FV +P Sbjct: 651 QDVPGAIATMHALEAIGVHLAIDDFGTGYSS---LSALKRFPVRRLKIDRSFVTDIPLDA 707 Query: 599 GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 D ++ +AII LAQ L L++IAEGVE+EAQ ++L KAG QG+ F+RPL E FE Sbjct: 708 DDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFESLL 767 Query: 659 LEEK 662 + Sbjct: 768 SSAR 771 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 143/530 (26%), Positives = 248/530 (46%), Gaps = 23/530 (4%) Query: 146 FRMYKFVMSTLSTLVTIYLLLSLILTVAISWC--INRLILHPLRNIARELNAIPAKELVG 203 +++ + + L+ V + ++ + + + E A++ Sbjct: 574 NPVFERYLGRRERDIVGLGDEELMTPVEAARVRQLDERAMAAWQPLVYEETLTFAEDGYA 633 Query: 204 HQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE--NAMRFPVSDLPNKALLMEMLE 261 + D G + ++++ + R EQ A ++ LPN+ LL++ L+ Sbjct: 634 GYFETIKTPIRDMHGHVTGLLSVSRDITDRKKAEQQIELLAFFDALTGLPNRRLLLDRLQ 693 Query: 262 QVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQIS 317 + A Q AL+ I + +D L + LL+ + ++L+ + +A+ Sbjct: 694 RAGAACQRNEKLGALLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFG 753 Query: 318 GYDFAVIANGVQEPW-----HAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL- 371 G +F V+ G+ A + +++L ++ + Q SIG+ +F Sbjct: 754 GDEFVVMLEGLDADTALAALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQRR 813 Query: 372 TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP 431 T ++L RA A + A+ G+N +FFDP R ESD+ + H+ + LQP Sbjct: 814 TVDELLKRADLAMYQAKAAGRNTQRFFDPDMQAQVTARSQLESDLRQGIARHELTVHLQP 873 Query: 432 QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW- 490 V+ ++ +L AE L+R + P P I E GL++ +G VL+ +C L W Sbjct: 874 IVDGST-RLCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWA 932 Query: 491 -QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVA 549 ++VN+SA Q P+ VA++L L P L LE+TES + D + Sbjct: 933 THPATASFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTIC 992 Query: 550 ILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAA 606 + L+ GV ALDDFG GY+ L ++K LP+D++KID+ FV + P D++++ Sbjct: 993 RMAQLKRVGVGFALDDFGTGYSS---LSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRT 1049 Query: 607 IIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 I+ LA+SL+LQ++AEGVET Q +L G QG+LF RP+P+E FE Sbjct: 1050 ILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAFER 1099 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 135/477 (28%), Positives = 231/477 (48%), Gaps = 16/477 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPN 252 L+ + + D+ G VR + R E+ + P++ LPN Sbjct: 500 RHRDGSLIWIEARGQAI--RDDRGRPVRITGTMTDVTDRKRFEEQLMYVSTHDPLTGLPN 557 Query: 253 KALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 + LL + L+ + + A++++ + + L + LL + ++L S + Sbjct: 558 RTLLQDRLQHAADQAERKGNSVAVLLLDLDRFKLVNDSLGHQVGDKLLRAISQRLASSVR 617 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 P + ++ +F +IA + EP A + + VL +S+ ++ QL CSIG+ +F Sbjct: 618 PADTIGRLGADEFLIIAEDLTEPQMAARVAETVLAGLSQPFGLDGQQLFITCSIGITLFP 677 Query: 369 GDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 GD L A +A TA+ G N +FF P+ EAA RL+ E + A++ QF + Sbjct: 678 GDATDIGALLRDADTAMHTAKSAGGNGYRFFTPEMNEAAVARLSLEHALREAIDQGQFEL 737 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 QP+ + + + V E LLR + P+ P I E G+++ +G WVL + + Sbjct: 738 HYQPKASLETMQTVGVEALLRWRHPEMGMIPPSTFIPVAEETGMILAIGDWVLRAALEQI 797 Query: 488 AAWQERGI-MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 W+ G+ LP++VN+S Q+ + + LL Y ++P L LE+TE+ + + Sbjct: 798 NRWERAGLEPLPVAVNVSVRQITSSHFADRIQSLLDEYGVRPDLLELEITETAMMSNMAF 857 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDS---SM 603 L LR G+R+A+DDFG GY+ L +++ LPI LK+D+ FV P ++ ++ Sbjct: 858 IADGLAELRGRGIRIAVDDFGTGYSS---LSYLRRLPITTLKVDRSFVSEAPSNADTGAI 914 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 A II + + L L ++AEG+ET+ Q D+L + AQGFL P+P E L Sbjct: 915 AATIIAMGRQLGLTVVAEGIETQEQLDFLRRHRCHEAQGFLIGFPVPAAELEARCLR 971 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 84/239 (35%), Gaps = 3/239 (1%) Query: 3 VSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAIL 62 + + L+ KQ LV +V + + T ++ + ++ EP + A Sbjct: 44 LRKRLSYKQARNTLVFTLVLGLFLSSVQIALDLLDMEKQTDQLVKQVLSTLEEPAAEAAY 103 Query: 63 KGDIPEAEAILASIKPAGVVSRADVV-LPNQFQALRKSFIPERPVPVMVTRLFELPVQIS 121 D AE ++ + V RA + A ++ E + + L + Sbjct: 104 SFDQALAERVITGLFAYRPVYRAAIYEDLGNVLASKERLPTEGRLKWLAELLLPHEKSFA 163 Query: 122 LGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRL 181 + + + R A + L + D + + ++ L L L A++ + Sbjct: 164 IPL--IVRRAEELRVGELRVSIDRYVIAADFFRRAELVLATSALWMLGLATALAVMLYLS 221 Query: 182 ILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE 240 I P +A + + + G L +P H DDE+G+L R N R E+ Sbjct: 222 ITKPFLRLAGAIAEVDPAQPAGRPLTVPSHHADDELGLLARITNDLLTQFDRSLVERRR 280 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 125/451 (27%), Positives = 229/451 (50%), Gaps = 15/451 (3%) Query: 221 VRSYNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVV----ARKQTTALMI 274 + L + + ++ + A ++ LPN+ LL + L Q V R ALM Sbjct: 476 IAFQTLFRDITEQKQTSAQIEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLALMY 535 Query: 275 ITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA 334 + + +D L ++LL + E+L+ + LA++ G +F ++ NGV Sbjct: 536 LDLDHFKDVNDSLGHGAGDVLLQIVAERLQGCVRADDTLARMGGDEFVLLLNGVNGADDV 595 Query: 335 ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKN 393 ++ +++ +S+ + I +LR S+G++M D A+ L A A + A+ +G+ Sbjct: 596 ASIAGKIIHELSQPMRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQGRA 655 Query: 394 QIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPD 453 +F+ + + +R+ E + +ALE ++F ++ QPQV++ G+++ E L+R P Sbjct: 656 TYRFYTQALHDQSVERVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEALIRWNHPG 715 Query: 454 GSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL-MHPN 512 P I E GL++ +G+WV++++C W ++G + +S N+SA Q Sbjct: 716 MGQVSPARFIPIAEQSGLIIDIGNWVMKQACHQAKRWHDQGWDIKVSFNVSARQFMRSGE 775 Query: 513 MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAG 572 ++ + + L + P + +E+TES + DP IL +R G+++ALDDFG GY+ Sbjct: 776 LMQSLRDALAESGVDPTRMEVELTESLLL-DPQGMGEILHEIRALGIQLALDDFGTGYSS 834 Query: 573 LRQLQHMKSLPIDVLKIDKMFVE---GLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQR 629 L +++ PI +LKID+ FV D+ M+ II +A +L + +IAEG+ET AQR Sbjct: 835 ---LSYLRRFPISILKIDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQR 891 Query: 630 DWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 D L G + QG+ ++ P+P F + Sbjct: 892 DMLETQGCEVGQGYHYSCPVPATEFSLLLQQ 922 >UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUW0_DESOH Length = 764 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 137/569 (24%), Positives = 255/569 (44%), Gaps = 39/569 (6%) Query: 114 FELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVA 173 +L + R P+ + + + L L ++ L + Sbjct: 208 LDLNYTYVSPSVKILRGYEPEAV-------MKQALSDSFAPSSLDLAMRTLSEAVALGKS 260 Query: 174 ISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 N+ R + E+ V + + D+ V +++ + +R Sbjct: 261 GGTEYNKS-----RTLQLEIKK-KDGTTVWTETKFSFV--RDKNKQTVGILGVSRDITER 312 Query: 234 H--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVL 287 E+ A +++LPN+ L +ML + + Q A++ I + + + Sbjct: 313 RLAEEKIRYLATHDNLTELPNRTLFGQMLGRAIKFAQRYQRQFAVLFIDLDRFKIINDTM 372 Query: 288 KEAQREILLLTLVEKLKSVLSPRMILAQI----------SGYDFAVIANGVQEPWHAITL 337 + LL + + + L ++ ++ G +F V+ V T+ Sbjct: 373 GHDAGDQLLKEIASRFRQSLRAVDVVGRLNEKDSVVGRLGGDEFVVLIEEVTNLSQVATV 432 Query: 338 GQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAE-QLYSRAISAAFTARHKGKNQIQ 396 Q++L + + + + R SIG++++ D E L +A A + A+ +GKN Q Sbjct: 433 AQKILNTAIKPMVLLGEECRVTASIGISVYPDDGEDERTLMKKADMAMYFAKEEGKNNFQ 492 Query: 397 FFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSW 456 F+ A +R E+++ +ALE ++ + Q +++ +G + +E LLR + P Sbjct: 493 FYSQNTHSPAFERFFVEAELRHALERNELYLDYQAKLDFKTGAITGSEALLRWRNPGLGL 552 Query: 457 DLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI-MLPLSVNLSALQLMHPNMVA 515 P + E GL+V +G WV++ +C AWQ +G+ + ++VNLS QLM ++ Sbjct: 553 VAPTQFLPVAEETGLIVPIGRWVMKTACAQNVAWQRQGLPPVTVAVNLSLRQLMDDKLIE 612 Query: 516 DMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQ 575 D+ L + P L LE+TES + P + +L +++ GVR+ALDDFG GY+ Sbjct: 613 DIRTALEASGMAPNLLELEITESIVMHKPAPLIELLARIKSLGVRIALDDFGTGYSS--- 669 Query: 576 LQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWL 632 L +K LP+D LK+D+ F+ L P D +I A+I + ++L+L +IAEGVET AQ +L Sbjct: 670 LAQIKHLPVDTLKVDRSFIRNLQQNPDDREIIEAVIAMGRALSLNVIAEGVETLAQDTYL 729 Query: 633 AKAGVGIAQGFLFARPLPIEIFEESYLEE 661 + QGF F++P+ + F + + Sbjct: 730 REHICDEMQGFYFSKPVAPDQFADLLSKH 758 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 128/475 (26%), Positives = 226/475 (47%), Gaps = 18/475 (3%) Query: 198 AKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEE--QNENAMRFPVSDLPNKAL 255 + L+ + D E + R + A ++ LPN+ L Sbjct: 502 NGAVRQVSLSSRYIDIDGEK----HVLTFVHDITDRKEAQARIEYLAHHDALTGLPNRVL 557 Query: 256 LMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM 311 + A + AL+ + + + L + LL + +L+ L Sbjct: 558 FRDRFALATAWAERAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRLRECLRETD 617 Query: 312 ILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL 371 ++++ G +F + +++P + ++ ++ +E +L SIG+A++ D Sbjct: 618 TVSRLGGDEFLIALTDIRDPQAINSATAKIFDTLTRPFELEGHELTNTMSIGIAIWPDDG 677 Query: 372 -TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQ 430 + L A +A + A+ G+N +F+ Q A ++L + + +ALEN +F + Q Sbjct: 678 EDFDTLLKNADTAMYQAKRAGRNTWRFYTEQMNANAVEQLQLRTALHSALENDEFLLHYQ 737 Query: 431 PQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAW 490 PQ+ + SG +V E LLR PD I E GL+V +G WVL E+C W Sbjct: 738 PQINLASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLREACMQAVRW 797 Query: 491 QERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVA 549 +G+ L ++VNLSA+Q ++ ++ L+ + P L LE+TES + D + + Sbjct: 798 TRQGLPELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELELTESLLLVDTESVIE 857 Query: 550 ILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAA 606 LR L++ GVR+++DDFG GY+ L ++K +D LKID+ FV + P D++++ A Sbjct: 858 TLRRLKSLGVRLSIDDFGTGYSS---LAYLKRFAVDKLKIDQSFVRDIATDPDDAAIVRA 914 Query: 607 IIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 I+ +A +L LQ+IAEGVE+E +L AQG+ +ARP+P + E + Sbjct: 915 IVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGDALAEWLVAS 969 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 126/449 (28%), Positives = 240/449 (53%), Gaps = 13/449 (2%) Query: 219 MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMI 274 + ++ +QL Q+ + + A P++DLPN+ L ++ L Q + + Q AL+ Sbjct: 439 EITNYLDIQEQLQQQKND-LDFIAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLF 497 Query: 275 ITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA 334 I + ++ A +++L+ ++LK + +A++ G +F ++ + ++ Sbjct: 498 IDLDRFKEINDSFGHASGDLVLIECGKRLKKAIREIDTVARLGGDEFTILIDELKTNNVI 557 Query: 335 ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKN 393 I + ++++ +S+ + + SIG+++F D A QL A +A + A+ GKN Sbjct: 558 INVVKKIIKTLSDPIFVNENIFHITASIGISIFPNDGTDANQLLQNADAAMYQAKEDGKN 617 Query: 394 QIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPD 453 F+ + E A RL E+++ +AL+N QF ++ QPQV++T+ K+V E L+R Sbjct: 618 TYHFYTKEMTEQAYNRLLMENNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQ 677 Query: 454 GSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPN 512 PD I E GL++ +G ++ + + ++ W + + +++N+SA QL Sbjct: 678 KGIIPPDHFIPLAEETGLIIPLGKQIIAMASQTISEWHQANLTNARIAINVSAKQLRDSR 737 Query: 513 MVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAG 572 ++ L + QP + +E+TES + +P A+ +L LR G+ +++DDFG GY+ Sbjct: 738 FFHNLNTALNKNNCQPDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSS 797 Query: 573 LRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQR 629 L ++K LPI +KID+ FV LP D+ + AII ++QSLNL +IAEG+ET+ Q+ Sbjct: 798 ---LAYLKKLPITKVKIDRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQ 854 Query: 630 DWLAKAGVGIAQGFLFARPLPIEIFEESY 658 +++ + G + QG+ ++RPL + Sbjct: 855 NFVLQEGCKLIQGYYYSRPLTKKAMTAKL 883 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 139/507 (27%), Positives = 241/507 (47%), Gaps = 36/507 (7%) Query: 178 INRLILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQR 233 + + N E+ LA+ + + +G + + L +R Sbjct: 437 FYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLAINAV--RNSLGEITHYVAIFSDLTER 494 Query: 234 HY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCE------------T 279 E A ++ LPN+ + + +E + + Sbjct: 495 KAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVR--------DNQRLALLLLDLDR 546 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 + L + + LL +++KSV++P +LA+ G +F ++ + +P A + Sbjct: 547 FKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGEAALAAE 606 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQFF 398 +V + + + + L SIG++++ D E L A +A + A+ G+N +F+ Sbjct: 607 RVRDVFANPIELHNHVLTITPSIGISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFY 666 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 A++ L ES + ALE +F + QPQVEM SG++V AE L+R P Sbjct: 667 TADLNARAREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLG 726 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM-LPLSVNLSALQLMHPNMVADM 517 P I E G +V +G+WV+ E+ R L W+ G+ L L++NLSALQ P++ + Sbjct: 727 PVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQV 786 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 + L + L +EVTES ++D A + + ++N G+R+++DDFG GY+ L Sbjct: 787 KQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSS---LS 843 Query: 578 HMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K D LKID+ FV +P DS++ AII +A++LN+Q++AEGVET Q +L + Sbjct: 844 YLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQ 903 Query: 635 AGVGIAQGFLFARPLPIEIFEESYLEE 661 G QG+L A+PLP + F E ++ Sbjct: 904 EGCDFVQGYLIAKPLPADDFAELLHKD 930 Score = 52.3 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 74/230 (32%), Gaps = 22/230 (9%) Query: 15 VAAVVLVFVFIFCTVLL-FHLVQQNRYNTATQLE----SIARSVREPLSSAILKGDIPEA 69 V + ++ + ++ + + N TQLE + V + + Sbjct: 20 VFLIAVILGLLIPASIISYLSFNIQKDNLTTQLETDQRRLLDIVALGMQEPLWNLSRQAG 79 Query: 70 EAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLER 129 ++AS+ V V Q + ER + S+ Sbjct: 80 NPLIASVMEDPRVISIRVTDTQSNQVFLSAVRSERRI-------------GSVSYVEKPV 126 Query: 130 PANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNI 189 + I + ++ D+ + + + + ++ I ++ + I ++ L P++ + Sbjct: 127 IYRGEAIGQVTMEFDNENLAIALSNQVKNILMILAAQLVLSIMLIMSILHSRFLSPMKLL 186 Query: 190 ARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQN 239 + + +L + + DE+G L + L+R +E Sbjct: 187 TEQARLLAELKLD----SPFEWSRRDELGRLGTHLEWTRSELKRLVDELR 232 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 116/475 (24%), Positives = 228/475 (48%), Gaps = 15/475 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHY--EEQNENAMRFPVSDLP 251 N EL L + + D+ G + + + + E+ A+ ++++P Sbjct: 93 NKRKDGELYLEWLTISVV--KDQKGNMTNYVAMFSDITEHKRNVEQLTRLALYDTLTNVP 150 Query: 252 NKALLMEMLEQVVA----RKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL + LE ++ Q+ AL+ + + ++ L ++LL ++LK +L Sbjct: 151 NRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVGDMLLKETAQRLKRML 210 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 + +A+ G +F +I ++ A + ++++ + ++ SIG++++ Sbjct: 211 RKQDTIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKRPFCFNHQEIYISTSIGISVY 270 Query: 368 YGDLTA-EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 D T E L A A + A+ G+NQ + ++ E+ + ALE +F Sbjct: 271 PYDGTDKETLIRMADRAMYQAKKNGRNQYALYHAGMHGNGKQLFQLETALRKALERGEFE 330 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 ++ QPQ+++ + ++ + E L+R P+ + P I E GL+ + W++ ++C Sbjct: 331 LYYQPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGLITPISDWIMMQACEH 390 Query: 487 LAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHA 546 L Q R + +S+N+S + + + + + + + P + LE+TES + Sbjct: 391 LKQLQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVNPRLIELELTESAVMPHAEQ 450 Query: 547 AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSM 603 +V L L+ G+ +A+DDFG G++ L ++ PID+LKID+ F + L DS++ Sbjct: 451 SVERLTKLKTMGMSIAIDDFGTGFSS---LSYLHRFPIDILKIDRSFTKQLSRYQQDSAI 507 Query: 604 IAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 + AIIM+A SL ++++AEGVET+ Q L K QG+ ++PL I E Sbjct: 508 VKAIIMMAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSKPLSISELYEFL 562 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 134/481 (27%), Positives = 240/481 (49%), Gaps = 17/481 (3%) Query: 194 NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQ--RHYEEQNENAMRFPVSDLP 251 N E+ +++ + D G + + L + E + A P++ LP Sbjct: 183 NRRKNSEIYPQLISIDVI--RDHTGRVCNYVAVLTDLSKLRSSQLELDFLAHHDPLTRLP 240 Query: 252 NKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 N+ LL+ L+ + Q AL+++ + +D + LL + +L + Sbjct: 241 NRLLLLSRLQHGIELAQRDGTHLALLMLDLDRFKDINDSFGHLVGDELLQLVATRLVKQV 300 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIE-RIQLRPHCSIGVAM 366 + + G +F+V+ V A + ++ ++SE + +++R S+G+++ Sbjct: 301 RTIDTVGRFGGDEFSVLMEDVAGAEQAARVANDIIRVLSEPYGLSSGVEVRIGASVGISI 360 Query: 367 FYGDL-TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 + + T E + +A SA + A+ +G+ + +F +AA+ R+ E + A+ + Sbjct: 361 YPDNGLTPELMLQQADSALYQAKIEGRGRFAYFSESLTQAARARIDIEVRLRRAITQGEL 420 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QPQV++ SG++V AE L+R Q P P I E GL+ + WVL E+C+ Sbjct: 421 RVYYQPQVDIPSGRIVGAEALVRWQCPIEGLVPPARFITIAEATGLIGEIDDWVLRETCQ 480 Query: 486 LLAAWQERGIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 W+ G+ L L+VNLSA Q + ++ + ++L L LE+TES + Sbjct: 481 QGQRWRAAGLPTLTLAVNLSAYQFLQGDISQTVAQVLRDTGYPAAFLELELTESALMQRE 540 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDS 601 A+ +L L+ GVR+A+DDFG GY+ L ++K P+DVLKIDK F++ +P D Sbjct: 541 AQAIQMLDRLKALGVRLAIDDFGTGYSS---LAYLKLFPLDVLKIDKRFIDDIPAHRDDM 597 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ++ AII +A SL L+++AEGVE + Q +L G QG+L +RP+P FE+ +L Sbjct: 598 EIVTAIIAMAHSLRLKVLAEGVENKEQLAYLQTQGCDQFQGYLTSRPVPAAEFEKLFLSG 657 Query: 662 K 662 + Sbjct: 658 R 658 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 132/448 (29%), Positives = 219/448 (48%), Gaps = 14/448 (3%) Query: 226 LNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCET 279 L + + +R ++ A ++DLPN+ L ++ L Q +A A++ + + Sbjct: 284 LFEDITERRKSEQQIQHMAYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFLDLDR 343 Query: 280 LRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQ 339 +D L + + LL+ + +L + LA++ G +F VI + + +A + Q Sbjct: 344 FKDINDTLGHSAGDQLLIQVTRRLGRQIRSCDTLARLGGDEFVVIVTDLGKKMNATRVAQ 403 Query: 340 QVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFF 398 ++ + I +L SIG+A+F D AE L A A ++++ G+N+ F+ Sbjct: 404 DLINAIQPPFLIAGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNRYNFY 463 Query: 399 DPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDL 458 + A R+ E+ + NALE +F + QP + +V+AE L+R P Sbjct: 464 SASMNQKALMRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRWNHPTRGRIP 523 Query: 459 PDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVADM 517 PD ID E GL+V +G WVL C + W + G+ L SVN+S+ Q+ + + Sbjct: 524 PDQFIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQIERQDFAEIV 583 Query: 518 LELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQ 577 L L +E+TES I ++ L L+ GV A+DDFG GY+ L Sbjct: 584 RNALRESGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFGTGYSS---LG 640 Query: 578 HMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK 634 ++K+LPID +KID+ FV + D +++ AII ++Q L ++ IAEGVET Q +L + Sbjct: 641 YIKTLPIDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRFLQE 700 Query: 635 AGVGIAQGFLFARPLPIEIFEESYLEEK 662 G QG+ F RPL E EE ++ Sbjct: 701 RGCEEIQGYYFHRPLSAEALEELLRAQE 728 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 151/618 (24%), Positives = 276/618 (44%), Gaps = 34/618 (5%) Query: 72 ILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPA 131 ++ + + + L + + V + + L E+ + L A Sbjct: 102 LVDGLLVSFSIEAMHRYRKKSEVELAEIKLAHSQVSTLNSELDEMLHKQRETEQELLISA 161 Query: 132 NPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAIS------WCINRLILHP 185 ++ DS + V + + ++ T + + Sbjct: 162 TAFEAQDGIMITDSKGVILRVNQAFTDITGYSSEEAVGQTPRLLKSGRHDADFYAAMWQC 221 Query: 186 LRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQN 239 ++N + + E+ L + + D G +V + + R + + Sbjct: 222 IKNTGQWSGEIWDRRKNGEIYPKWLTITEVKSFD--GSVVHYVSSQVDITARKASEDRIH 279 Query: 240 ENAMRFPVSDLPNKALLMEMLEQV----VARKQTTALMIITCETLRDTAGVLKEAQREIL 295 A P++ LPN+ LL++ L + + ALM I + + L ++L Sbjct: 280 NLAFYDPLTQLPNRRLLLDRLRHSVSFSLRDGRHVALMFIDLDKFKKINDTLGHDIGDLL 339 Query: 296 LLTLVEKLKSVLSPRMILAQISGYDFAVIANGV-----QEPWHAITLGQQVLTIMSERLP 350 L + E+ + + +A++ G +F V+ +G+ + A +G++++ +++ Sbjct: 340 LKQVAERTLTCVRTCDTVARLGGDEFVVLLDGLAGNLHEAAAQAKQIGRKIIDTLNQSYD 399 Query: 351 IERIQLRPHCSIGVAMFYGD-LTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKR 409 + + + SIG+A+F TAE L +A A + A+ G+N ++FFDP+ + R Sbjct: 400 LAGHEYQSGASIGIALFDEHCQTAEDLLKQADIAMYQAKKAGRNTLRFFDPEMQASILAR 459 Query: 410 LTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECC 469 + E D +AL QF I QP + G++ AE L+R + P I E Sbjct: 460 VALEKDFKDALLQEQFYICYQPVIS-REGRVAGAEALVRWRHSIRGIVSPADFIPLAEET 518 Query: 470 GLMVTVGHWVLEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQ 527 GL+V +G+WVL+ +CR L+ W ++ L ++VN+SA QL + V ++ L+ Sbjct: 519 GLIVPLGNWVLKTACRQLSDWSSRDDTRDLTIAVNVSARQLKQEDFVTTVMGLIEETGAN 578 Query: 528 PGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVL 587 P L LE+TES + D + + + L+ AG+ ALDDFG GY+ L ++ LP+D L Sbjct: 579 PRRLKLELTESMLVSDAESIIVKMNLLKEAGITFALDDFGTGYSS---LAYLSRLPLDQL 635 Query: 588 KIDKMFVEGLP-GDSS--MIAAIIMLAQSLNLQMIAEGVETEAQRDWLAK-AGVGIAQGF 643 K+D+ FV + DS+ + AA I LA +L L+++AEGVE EAQR +L+ QG+ Sbjct: 636 KVDQSFVRNIETEDSAVVICAATINLAHNLKLKVVAEGVENEAQRYFLSSVHQCDFLQGY 695 Query: 644 LFARPLPIEIFEESYLEE 661 LF++P+ I+ FE Sbjct: 696 LFSKPVAIDEFECFIRNN 713 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 132/477 (27%), Positives = 230/477 (48%), Gaps = 19/477 (3%) Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNK 253 I + E + L + + L+ S + + +R E+ + + ++ LPN+ Sbjct: 935 IKSGETRIWDFSSAPLGKLADGRRLIISMAI--DITERKQAEEQLRHSVLHDGLTGLPNR 992 Query: 254 ALLMEMLEQVVARKQT-----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 LL++ +EQ + RKQ A++ I + + L + LL T+ +KL+ + Sbjct: 993 TLLLDRVEQAIKRKQQQPNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVR 1052 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 P +A+ G +F ++ + A + Q++ ++ + SIG+ Sbjct: 1053 PTDTVARFGGDEFVILLEDLTIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCS 1112 Query: 369 G-DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAI 427 + T +L A A + ++ G+ + FDP A + L E+++ ALE +F + Sbjct: 1113 SPEQTPSELVRNADIAMYRSKEAGRARYTMFDPIMHTQATQLLELETNLRLALEREEFIV 1172 Query: 428 WLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLL 487 + QP V + + L+ E L+R P+ P I E GL++ +G WVL ESCR + Sbjct: 1173 YYQPIVSLMNRNLLGFEALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQM 1232 Query: 488 AAWQERGI---MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDP 544 AWQE+ I L +SVNLS QL PN++ + +LT ++ L LE+TES +++ Sbjct: 1233 KAWQEQFIGAENLRVSVNLSGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNK 1292 Query: 545 HAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GDS 601 +L ++ ++V++DDFG GY+ L ++ LP+D LKID+ FV + + Sbjct: 1293 EQVSELLLQMKAKKIQVSIDDFGTGYSS---LSYLHYLPVDTLKIDRSFVSRMSQVGENF 1349 Query: 602 SMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 ++ AII LA L + ++AEGVETE L + G QG+ F++PL E Sbjct: 1350 EIVEAIITLAHHLQMDVVAEGVETEQHLRQLQQLGCEFGQGYFFSKPLESEKIVSWL 1406 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 145/570 (25%), Positives = 252/570 (44%), Gaps = 37/570 (6%) Query: 110 VTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTL---VTIYLLL 166 + Q+ + A P P+ L L + + +L + ++ Sbjct: 300 TAEILATQRQLQATL-----GAIPDPLLELGLDGRCYNAHSSRTDSLPWPTEDLIGRTIM 354 Query: 167 SLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNL 226 L+ A + L + + + H + + G L Sbjct: 355 ELLPPQACQIVLAALQEAKEKECSIGKQIKVPLDNGMHWFEMSVTRKSALPGEEPLFLVL 414 Query: 227 NQQLLQRHYEE--QNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCE------ 278 + + + E A ++ LPN+ LL + ++ Q Sbjct: 415 CRDITESKQAERKIQLLAHFDSLTGLPNRVLLTDRCNLALSAAQRNG-------TPLALL 467 Query: 279 -----TLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWH 333 ++ L + +L+ L +LK + + + ++ G +F ++ Sbjct: 468 LLDLDHFKNVNDSLGHRVGDEVLIALAGRLKGAVREQDTVCRLGGDEFILVLPE-TNAAG 526 Query: 334 AITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGK 392 A + + +L +E +L SIG+A+F GD + L A +A + A+ G+ Sbjct: 527 AAHIAEMLLQSALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGR 586 Query: 393 NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQP 452 N +FF + +++ LT E+ + ALE +Q + QPQ+ + SG++V AE LLR P Sbjct: 587 NNYRFFTAEMQARSERTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHP 646 Query: 453 DGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERG-IMLPLSVNLSALQLMHP 511 + P I E CGL++ +G WVL S + L AW + G + + LSVNLS++Q H Sbjct: 647 ELGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHA 706 Query: 512 NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYA 571 ++ + +L ++ L LE+TE+ + DP A+A++ L GVR+++DDFG GY+ Sbjct: 707 DLPELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYS 766 Query: 572 GLRQLQHMKSLPIDVLKIDKMFVEGLP---GDSSMIAAIIMLAQSLNLQMIAEGVETEAQ 628 L ++K + +KID+ FV + D +++ AII +A SL +Q IAEGVETE Q Sbjct: 767 S---LSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQ 823 Query: 629 RDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 ++L G QG+ F+RPLP+E FE Sbjct: 824 LEFLKAKGCTEVQGYYFSRPLPVEQFEAFM 853 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 163/630 (25%), Positives = 286/630 (45%), Gaps = 34/630 (5%) Query: 53 VREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTR 112 P+ + I +A + A A +R + T Sbjct: 235 RNLPVPNGIWTLSASPINGWIAPWRLASETLMALCFSLLLGYLAYLLVQLQRRKLSLQTA 294 Query: 113 LFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTV 172 + E ++ L+ A I L+ + S + + L+ + + Sbjct: 295 VSEQTRELVNARAQLQ--ATLDAIPDLLFEVGSDGIIYQFHTRRPELLLVPPEAFI--GK 350 Query: 173 AISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGM---------LVRS 223 A S + + + + E +A E + L +P +D E+ + + R Sbjct: 351 AFSEFMPDEVNQVIWSAMEEADATGFSEGKYYALEMPGGRRDFELSVASKAGKEKGIQRY 410 Query: 224 YNLNQQLLQRHY--EEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITC 277 L++ + +R N A P++ LPN+ LL + LE +A Q AL+ I Sbjct: 411 VMLSRDITERKENEARINNLAFFDPLTQLPNRRLLQDRLEHAIATGQRQAALGALLYIDL 470 Query: 278 ETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITL 337 + + ++LL+ + ++L+ L + ++ G +F VI G+ Sbjct: 471 DDFKTLNDNRGHHVGDLLLIAVADRLRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQAAQ 530 Query: 338 G-----QQVLTIMSERLPIERIQLRPHCSIGVAMF-YGDLTAEQLYSRAISAAFTARHKG 391 +++L +++ ++ + SIG+ +F D E L RA A + A+ G Sbjct: 531 QVQQIAEKILQSLNQVYVLDEQEYFNSPSIGICLFGDDDADIEDLLKRADQAMYHAKAAG 590 Query: 392 KNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQ 451 +N ++FFDP +A +R +++I AL +QF ++ QPQV+ +G++ AE L+R Sbjct: 591 RNTLRFFDPHMQASAAQRFALQNEIREALLFNQFKLYYQPQVD-RTGRITGAEALIRWLH 649 Query: 452 PDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIM--LPLSVNLSALQLM 509 P+ P I E GL++ +G+W+L+ +C+ L W++ + L LS+N+SA Q Sbjct: 650 PERGMISPMDFIPIAEESGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQ 709 Query: 510 HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMG 569 P+ V +L +TR P L LE+TES + + + L++ G++ +LDDFG G Sbjct: 710 QPDFVTQVLAAVTRTGANPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDDFGTG 769 Query: 570 YAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETE 626 Y+ L ++K LPI+ LKIDK FV + P D+++ +I LAQS+ L +IAEGVET+ Sbjct: 770 YSS---LSYLKRLPINELKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGVETQ 826 Query: 627 AQRDWLAKAGVGIAQGFLFARPLPIEIFEE 656 QRDWL + G QG+ F +P+ E F Sbjct: 827 RQRDWLEQEGCLHYQGYYFGKPVGAEEFLR 856 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 137/568 (24%), Positives = 253/568 (44%), Gaps = 29/568 (5%) Query: 117 PVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISW 176 + + L A + +++ S V + + L + + Sbjct: 375 EKERAQEQLKLRNRAVDASVNAIIIADKSEPDNPIVYANPAFERISGYNLEDVTGRNFLF 434 Query: 177 CINR--------LILHPLRNIAREL----NAIPAKELVGHQLALPRLHQDDEIGMLVRSY 224 + I L++ N L +L + + D G + Sbjct: 435 LLGNETSQLGVANIKRALKSNTEGYALLKNYRKDGTLFWSELKVAPVT--DAKGDVTHFV 492 Query: 225 NLNQQLLQ--RHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQT----TALMIITCE 278 + + + ++ + ++ LPN+ LL + ++Q +A AL + + Sbjct: 493 AILNDVTESIQYQAQLEYKTKYDNLTGLPNRNLLNDRIQQAIAYAARRNKGFALAVFDLD 552 Query: 279 TLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLG 338 + + + LL + E L+S L LA++ G +F ++ + + + Sbjct: 553 NFKYINDSMGHETGDQLLTEVAESLRSCLREGDTLARLGGDEFVILMHKEECDRPLGLML 612 Query: 339 QQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRAISAAFTARHKGKNQIQF 397 ++ ++S+ ++ ++ SIGV F D A L A +A + A+ +G+N+I Sbjct: 613 NRIQQLVSQPRRLKDKEILVTPSIGVCQFPEDGEDASTLLKNADTAMYKAKERGRNRICS 672 Query: 398 FDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWD 457 + + E+ QKR+ E D+ +EN + ++ QPQ++ G V E L+R ++ D Sbjct: 673 YTQEMNESIQKRVQMEQDLRRGIENGELELYYQPQLDPHGGGAVGLEALVRWRKGDR-MV 731 Query: 458 LPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PLSVNLSALQLMHPNMVAD 516 P I E GL+ V WVL +C L W+++ + P+SVNLS Q V Sbjct: 732 PPLEFIPIAEETGLITEVDAWVLRAACLQLKMWRDQKQQMVPVSVNLSPRQFQDAYCVEL 791 Query: 517 MLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQL 576 + ++L I+PG L +EVTES + + A+ + L+ GV++++DDFG GY+ L Sbjct: 792 VRKVLQESNIEPGCLKIEVTESMVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYSS---L 848 Query: 577 QHMKSLPIDVLKIDKMFVEGLPGD---SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLA 633 ++K P D LKIDK FV + D +++I AII L ++L ++++AEGVET Q +L Sbjct: 849 SYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSFLV 908 Query: 634 KAGVGIAQGFLFARPLPIEIFEESYLEE 661 +AG + QG+ ++ PLP+ E+ Sbjct: 909 RAGCDLIQGYFYSPPLPVAACMHFLQED 936 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 677 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 155/493 (31%), Positives = 240/493 (48%), Gaps = 24/493 (4%) Query: 187 RNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMR 244 R+ + L R+ Q D + + + R +E N A Sbjct: 321 RHEEELMLHRRDGSQFWAHL---RVRQLDPAQPQAGCIWVIEDISARKAVEDEVNRLAFY 377 Query: 245 FPVSDLPNKALLMEMLEQVVARKQT----TALMIITCETLRDTAGVLKEAQREILLLTLV 300 P++ LPN+ LL + L Q +A AL+ I + + L A+ + LL + Sbjct: 378 DPLTQLPNRRLLRDRLAQALAASARSGMHGALIFIDLDNFKSLNDTLGHARGDQLLKLVG 437 Query: 301 EKLKSVLSPRMILAQISGYDFAVIANGVQE-----PWHAITLGQQVLTIMSERLPIERIQ 355 ++L + +A++ G +F VI + A +G+++L +++ P++ Sbjct: 438 QRLTHCVRESDTVARLGGDEFVVIVQDLGARLDECATQAEGVGEKILDALNQPYPLDGHV 497 Query: 356 LRPHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEES 414 SIG+ +F D + L A A + A+ G+N ++FFD +R E Sbjct: 498 RHSTPSIGITLFADDRDSVDDLLKEADMAMYQAKTAGRNTLRFFDADMQAMLVQRAALEE 557 Query: 415 DILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVT 474 D+ ++ F + QPQV + SG++ AEVLLR P P I E L+ Sbjct: 558 DMRESMRLSHFLLHYQPQV-VGSGRITGAEVLLRWPHPLRGLVPPAEFIPLAEDTNLITA 616 Query: 475 VGHWVLEESCRLLAAW--QERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLI 532 +GHWVLE +C+ LA W Q+ L +SVN+SA Q P+ VA+++ +L R P L Sbjct: 617 LGHWVLETACKTLADWSAQDDMKHLSVSVNVSARQFRQPHFVAEVMSILERTGADPHLLK 676 Query: 533 LEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKM 592 LE+TES ++D VA + L++ GV +LDDFG GY+ L H+K LP+D LKID+ Sbjct: 677 LELTESLLVEDVEDIVAKMSALKSRGVGFSLDDFGTGYSS---LAHLKRLPLDQLKIDQS 733 Query: 593 FVEGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPL 649 FV + P D ++ ++ LA SL L +IAEGVE AQR+ LA+ G QG+LF+RPL Sbjct: 734 FVRDILTDPNDLAIGRMVVALADSLGLTVIAEGVELAAQRELLAQIGCDAYQGYLFSRPL 793 Query: 650 PIEIFEESYLEEK 662 P E FE + Sbjct: 794 PREPFEACCRAAR 806 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 133/480 (27%), Positives = 235/480 (48%), Gaps = 21/480 (4%) Query: 196 IPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNK 253 I E + L + + L+ S L + +R E+ A+ ++ LPN+ Sbjct: 997 IKTGETRIWNFSSAPLGRLADNRRLIMSMAL--DITERKQAEEQLRHAAVHDQLTGLPNR 1054 Query: 254 ALLMEMLEQVVARKQT-----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLS 308 LL++ +EQ + R Q AL+ I + + L + LL + +KLK+ + Sbjct: 1055 ILLLDRIEQAIKRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVR 1114 Query: 309 PRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFY 368 P +A+ G +F ++ + A + QQ+ + ++ SIG+ F Sbjct: 1115 PMDTVARFGGDEFVILLENLTSRTEATKMAQQITDELRSSFCLQGQDFFISVSIGIT-FP 1173 Query: 369 G--DLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFA 426 + +A +L A A + A+ KG+ + FD + A + L E+++ ALE + Sbjct: 1174 SSYEESASELLRNADIAMYRAKEKGRARYTIFDSKMHIQATRLLELETNLRLALEREELI 1233 Query: 427 IWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRL 486 + QP V +T+GKL+ E L+R + P P I E GL++ +G WVL ESCR Sbjct: 1234 VHYQPIVSLTTGKLLGFEALVRWEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQ 1293 Query: 487 LAAWQER--GIM-LPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDD 543 + AWQ+ G+ + +SVNLS QL +P+++ + +L + ++ L LE+TES +++ Sbjct: 1294 MKAWQKEFSGLDKIRVSVNLSGKQLEYPHLINCLESILKQTGLEGKNLKLEITESMLMNN 1353 Query: 544 PHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLP---GD 600 +L ++ +++++DDFG GY+ L ++ LP+D LKID+ FV + + Sbjct: 1354 KEVVSDLLLQIKGKNIQISIDDFGTGYSS---LSYLHYLPVDTLKIDRSFVNRMTQLGEN 1410 Query: 601 SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE 660 ++ AII LA L + ++AEGVETE L + G QG+ F++PL + + + Sbjct: 1411 FEIVEAIINLAHHLQMDVVAEGVETEQHIKQLKQLGCESGQGYFFSKPLDSQKVTSWFEK 1470 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 135/466 (28%), Positives = 231/466 (49%), Gaps = 15/466 (3%) Query: 208 LPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPNKALLMEMLEQVVA 265 + ++ +E G + + + +R + A ++ LPN+ L E L +A Sbjct: 373 VIKIPLYEEDGARRGLVMVGRDVTERKLAAARIHHLAHHDSLTGLPNRVLFQERLRTALA 432 Query: 266 RKQT----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDF 321 + + ALM + + +D L ++LL + ++L + +A++ G +F Sbjct: 433 QAKRLGHKVALMFLDLDKFKDINDTLGHHLGDLLLKAVAKRLLRCVRETDTVARLGGDEF 492 Query: 322 AVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL-TAEQLYSRA 380 AV+ + +P A + + ++ +SE ++ ++ SIG+ +F D +E L A Sbjct: 493 AVVLTNLDDPEGASNVAESIIASISEPFGLDEHEVNTSTSIGITIFPDDAVDSEVLLKNA 552 Query: 381 ISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKL 440 A F ++ +G+N F+ + Q R E D+ AL Q + QP +EM +G++ Sbjct: 553 DLAMFRSKAEGRNNYHFYVAEMDAEIQARKVVEHDLRVALGTDQLEMHYQPLIEMKTGEV 612 Query: 441 VSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIML-PL 499 V E L+R + P W P I E L+V +G W+L SC W G+ + Sbjct: 613 VGCEALIRWKHPTRGWVSPVEFIPIAERTDLIVPLGRWILHRSCLQGRDWARAGLPPQKI 672 Query: 500 SVNLSALQLM-HPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAG 558 +VNLS +Q H ++A + ++L + P L LE+TE + + A V +LR LR+ G Sbjct: 673 AVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEITEGIAMQNVEATVDVLRQLRDMG 732 Query: 559 VRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQSLN 615 V +++DDFG GY+ L ++K P+D LKID+ FV + P +++++ AI+ L SL Sbjct: 733 VLISIDDFGTGYSS---LNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVNAIVTLGHSLG 789 Query: 616 LQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE 661 ++ EGVET Q D+L GV AQGF FA+ LP + F E+ Sbjct: 790 TRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDEFARFVREK 835 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 131/482 (27%), Positives = 232/482 (48%), Gaps = 19/482 (3%) Query: 195 AIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRH--YEEQNENAMRFPVSDLPN 252 I ++ + ++ G R + + H E+ +A+ ++ L N Sbjct: 346 RIRHRDGSYRWMRSRGKALRNQKGQPYRMGGSMTDVTEYHLIQEKILHDALHDAMTGLAN 405 Query: 253 KALLMEMLEQVVARKQT-----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVL 307 + LL++ L Q +AR+Q A++ + + + L + LL+ + ++L++ Sbjct: 406 RVLLIDRLTQAIARRQRRPNSLFAVLFLDVDRFKVINDSLGHLAGDQLLIGIGQRLRACT 465 Query: 308 SPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMF 367 P +A++ G +FA++ + +P A+ + +++L ++ +E ++ SIG+A F Sbjct: 466 RPEDTIARLGGDEFAILLEDLSDPAQAMKVAERILMVLGRPFLLEGHEIFTTASIGIA-F 524 Query: 368 Y--GDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQF 425 TAE L A +A + A+ GK + + F + E+++ A E +F Sbjct: 525 PWEDSQTAEDLLRDADTAMYRAKSLGKARYEVFSMTMRAQTIALMQMETELRRAAEREEF 584 Query: 426 AIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCR 485 ++ QP V++ + K+V E LLR Q P+ P + E GL++ + WV+ E+CR Sbjct: 585 LVYYQPIVDLATLKMVGFETLLRWQHPERGIISPGEFMAVAEETGLILPISWWVMAEACR 644 Query: 486 LLAAWQ---ERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRID 542 + W R L + VNLS +++ ++ +L L LEVTE ID Sbjct: 645 QMQRWAVIFPRSRKLRIGVNLSGRHFQQADLLPNLRSILAETGFPAQRLCLEVTEGILID 704 Query: 543 DPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PG 599 + A+A L +R G+ V++DDFG GY+ L ++ PID LKID+ F+ L Sbjct: 705 NKEVAIATLEEIRAMGIGVSMDDFGTGYSS---LSYLHRFPIDTLKIDRTFISALNSEES 761 Query: 600 DSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYL 659 ++++ AI+MLA SL LQ++AEG+ET Q L G QG+ FARPL E+ Sbjct: 762 SATIVHAILMLAHSLRLQVVAEGIETREQYRALQALGCNYGQGYFFARPLSARQVEKLLA 821 Query: 660 EE 661 + Sbjct: 822 RQ 823 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 133/466 (28%), Positives = 239/466 (51%), Gaps = 17/466 (3%) Query: 207 ALPRLHQDDEIGMLVRSYNLNQQLLQR-----HYEEQNENAMRFPVSDLPNKALLMEMLE 261 L R QDD G+ + ++++ + Q+ + + ++ LP + ++L Sbjct: 237 TLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHYDTLTGLPQRDFFFDLLH 296 Query: 262 QVV----ARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQIS 317 + +T AL+ + + ++ L + +L + ++L++ + L+++S Sbjct: 297 SHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVAQRLQNNIRITDNLSRMS 356 Query: 318 GYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLT-AEQL 376 G +F + + L Q+ L+++S + IE + SIG+++F GD T E+L Sbjct: 357 GDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEKL 416 Query: 377 YSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMT 436 S A SA + A+ G++ +F+ P E AQ L E+++ A+E Q + QPQ ++ Sbjct: 417 LSCADSAMYRAKESGRDAFRFYKPHMNEKAQGLLWLETELRLAIEQEQLELHYQPQYDLN 476 Query: 437 SGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGI- 495 +G+LV E L+R P+ P I + E L++ +G WVL +CR +AAW GI Sbjct: 477 TGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGIS 536 Query: 496 MLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLR 555 + ++VN+SA+Q ++ + +LL Y + L LE+TES +DD AA + L Sbjct: 537 PIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNKLT 596 Query: 556 NAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGL---PGDSSMIAAIIMLAQ 612 G+++++DDFG GY+ L ++K PI LKID+ F+ + D+++ +II LA Sbjct: 597 AMGIQLSIDDFGTGYSS---LSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAG 653 Query: 613 SLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESY 658 + ++++AEGVET Q +L + QG+LF RPLP + E Sbjct: 654 HMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKDIERQL 699 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.186 0.697 Lambda K H 0.267 0.0569 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,367,522,089 Number of Sequences: 3077464 Number of extensions: 399373495 Number of successful extensions: 1135525 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 22110 Number of HSP's successfully gapped in prelim test: 4040 Number of HSP's that attempted gapping in prelim test: 1017388 Number of HSP's gapped (non-prelim): 36264 length of query: 662 length of database: 1,040,396,356 effective HSP length: 135 effective length of query: 527 effective length of database: 624,938,716 effective search space: 329342703332 effective search space used: 329342703332 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.6 bits) S2: 98 (41.9 bits)