250 c3snkA_ Probab=64.60   E-value=8.2  Score=16.78  Aligned_columns=109  Identities=13%

Q ss_pred             CCHHHHHHHHHHHHHCCC-EEEEECCCCCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             199999999999998898-9999289888464245899972799899970678728621089999999999975991999
Q batch____       542 DDPHAAVAILRPLRNAGV-RVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIA  620 (662)
Q Consensus       542 ~~~~~~~~~~~~l~~~G~-~i~ld~fG~g~s~~~sl~~l~~l~~d~ikid~~~~~~~~~~~~~~~~i~~~a~~~~i~via  620 (662)
                      .++.........|.+.|+ .+...+=+..     ....++.-++|.|-+|-.+-..  ..-.+++.+.......-+ ++.
T Consensus        10 dd~~~~~~l~~~L~~~~~~~v~~~~~~~~-----~~~~~~~~~~dlvi~d~~l~~~--~g~~~~~~l~~~~~~~pi-i~l   81 (119)
T c3snkA_          10 SDPNFKRDVATRLDALAIYDVRVSETDDF-----LKGPPADTRPGIVILDLGGGDL--LGKPGIVEARALWATVPL-IAV   81 (119)
T ss_dssp             SCHHHHHHHHHHHHHTSSEEEEEECGGGG-----GGCCCTTCCCSEEEEEEETTGG--GGSTTHHHHHGGGTTCCE-EEE
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCCC-----HHHHHCCCCCEEEEEHHHCCCC--CCCCCCCCCCCCCCCCCC-CCC
T ss_conf             89899999999985310001111233211-----5888405896699871212546--632111112222221122-221


Q ss_pred             EECCCHHHHHHHHHCCCCEEECCHHCCCCCHHHHHHHHHCCC
Q ss_conf             703998999999971998993151158989899998874079
Q batch____       621 EGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK  662 (662)
Q Consensus       621 ~gVe~~~~~~~l~~~g~d~~QG~~~~~P~~~~~~~~~~~~~~  662 (662)
                      .+-.+.++...+.+.|++.    |+.||...+++-+..--|.
T Consensus        82 t~~~~~~~~~~~~~~Ga~d----~L~KP~~~~eL~~~v~~~~  119 (119)
T c3snkA_          82 SDELTSEQTRVLVRXNASD----WLHKPLDGKELLNAVTFHD  119 (119)
T ss_dssp             ESCCCHHHHHHHHHTTCSE----EEESSCCHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCHHHHCCCCC----EEECCCCHHHHHHHHHHCC
T ss_conf             3321000000111028561----7875989899999874149