18/01/2012 21:21:57 : INFO  : Run start: Wed Jan 18 21:21:57 GMT 2012
18/01/2012 21:21:57 : INFO  : Initialised job
18/01/2012 21:21:57 : INFO  : Renaming log file 'phyre2_20120118_212157.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/phyre_20120118_212157.log'
18/01/2012 21:21:57 : INFO  : Initialised job:
Sequence
>batch____
MHFAQRVRALVVLNGVALLPQFACKQGLANGELVRLFAPWSGIPRPLYALFAGRKGMPAI
ARYFMDELTTRLANGV

18/01/2012 21:21:57 : INFO  : Checked sequence
18/01/2012 21:21:57 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 21:21:57 : INFO  : PSI-BLAST 3 iterations
18/01/2012 21:22:51 : INFO  : PSI-BLAST 5 iterations
18/01/2012 21:24:16 : INFO  : Finished PSI-BLAST
18/01/2012 21:24:16 : INFO  : Running Buildali to generate a3m file
18/01/2012 21:27:49 : INFO  : Converting to HMM
18/01/2012 21:27:49 : INFO  : Calibrating HMM
18/01/2012 21:27:51 : INFO  : Searching HMM database
18/01/2012 21:29:39 : INFO  : Finished buildali
18/01/2012 21:29:39 : INFO  : Predicting secondary structure
18/01/2012 21:29:39 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 21:29:39 : INFO  : Predicting Disordered regions
18/01/2012 21:29:39 : INFO  : Predicted Disorder (Disopred)
18/01/2012 21:29:39 : INFO  : Running memsat_svm check
18/01/2012 21:31:54 : INFO  : Running memsat_svm full
18/01/2012 21:34:29 : INFO  : Predicted Transmembrane (memsat_svm) ID '5d324b7380e48bcb'
18/01/2012 21:34:29 : INFO  : Initialising fold library search
18/01/2012 21:34:29 : INFO  : Initialised search input
18/01/2012 21:34:29 : INFO  : Building Ensemble models
18/01/2012 21:34:29 : INFO  : Building hh.c3hhfB_.model.1.pdb
18/01/2012 21:34:30 : INFO  : Building hh.c3mz1D_.model.2.pdb
18/01/2012 21:34:30 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/hh.c3mz1D_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/c3mz1D_.2.pdb
18/01/2012 21:34:30 : INFO  : Building hh.c3t1bB_.model.3.pdb
18/01/2012 21:34:31 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/hh.c3t1bB_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/c3t1bB_.3.pdb
18/01/2012 21:34:31 : INFO  : Building hh.c3kosA_.model.4.pdb
18/01/2012 21:34:31 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/hh.c3kosA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/c3kosA_.4.pdb
18/01/2012 21:34:31 : INFO  : Building hh.c3fd3A_.model.5.pdb
18/01/2012 21:34:32 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/hh.c3fd3A_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/c3fd3A_.5.pdb
18/01/2012 21:34:32 : INFO  : Building hh.c3hhgF_.model.6.pdb
18/01/2012 21:34:33 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/hh.c3hhgF_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5d324b7380e48bcb/c3hhgF_.6.pdb
18/01/2012 21:34:33 : INFO  : Building c3hhfB_.1.pdb
18/01/2012 21:34:33 : INFO  : Building c3mz1D_.2.pdb
18/01/2012 21:34:33 : INFO  : Building c3t1bB_.3.pdb
18/01/2012 21:34:34 : INFO  : Building c3kosA_.4.pdb
18/01/2012 21:34:34 : INFO  : Building c3fd3A_.5.pdb
18/01/2012 21:34:35 : INFO  : Building c3hhgF_.6.pdb
18/01/2012 21:34:35 : INFO  : Building c2qsxB_.7.pdb
18/01/2012 21:34:36 : INFO  : Building c3fzjC_.8.pdb
18/01/2012 21:34:36 : INFO  : Building d1utha_.9.pdb
18/01/2012 21:34:37 : INFO  : Building c1al3A_.10.pdb
18/01/2012 21:34:37 : INFO  : Building d1al3a_.11.pdb
18/01/2012 21:34:37 : INFO  : Building c2uyeA_.12.pdb
18/01/2012 21:34:38 : INFO  : Building c3oxnD_.13.pdb
18/01/2012 21:34:38 : INFO  : Building c3fzvC_.14.pdb
18/01/2012 21:34:38 : INFO  : Building d1i6aa_.15.pdb
18/01/2012 21:34:39 : INFO  : Building c2hxrA_.16.pdb
18/01/2012 21:34:39 : INFO  : Building c3ispA_.17.pdb
18/01/2012 21:34:39 : INFO  : Building c3jv9B_.18.pdb
18/01/2012 21:34:40 : INFO  : Building c1iz1B_.19.pdb
18/01/2012 21:34:40 : INFO  : Building c3n6uA_.20.pdb
18/01/2012 21:34:47 : INFO  : Finished HH model building
18/01/2012 21:34:47 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 21:34:50 : INFO  : html domain output complete ID '5d324b7380e48bcb'
18/01/2012 21:38:01 : INFO  : Run end  : Wed Jan 18 21:38:01 GMT 2012
