BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (118 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q322G8 Protein yebF n=99 Tax=Enterobacteriaceae RepID=Y... 239 2e-62 UniRef50_D1RQX3 Protein YebF n=2 Tax=Enterobacteriaceae RepID=D1... 103 1e-21 UniRef50_A7FJ88 Protein yebF n=33 Tax=Enterobacteriaceae RepID=Y... 98 8e-20 UniRef50_Q7N3M3 Protein yebF n=2 Tax=Photorhabdus RepID=YEBF_PHOLL 87 1e-16 UniRef50_B6XER8 Putative uncharacterized protein n=2 Tax=Provide... 86 2e-16 UniRef50_D1P4X4 Protein YebF n=2 Tax=Providencia RepID=D1P4X4_9ENTR 85 8e-16 UniRef50_B4EYB7 Putative exported protein n=3 Tax=Proteus RepID=... 70 3e-11 UniRef50_D2TVU7 Putative uncharacterized protein n=1 Tax=Arsenop... 66 3e-10 >UniRef50_Q322G8 Protein yebF n=99 Tax=Enterobacteriaceae RepID=YEBF_SHIBS Length = 118 Score = 239 bits (610), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 117/118 (99%), Positives = 117/118 (99%) Query: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWA 60 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCE LDAAGIAASVKRDYQQNRVARWA Sbjct: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWA 60 Query: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR 118 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR Sbjct: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR 118 >UniRef50_D1RQX3 Protein YebF n=2 Tax=Enterobacteriaceae RepID=D1RQX3_SEROD Length = 119 Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/115 (40%), Positives = 67/115 (58%) Query: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWA 60 MK+ G + + L++ A + ++ +C L A +AA VKRDY QNR+ RWA Sbjct: 1 MKRTGLSVAVALLAMAGLTTAVQAQEQRAAKMAQCTGLQPAEVAAQVKRDYLQNRITRWA 60 Query: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEY 115 D+K++G A P+AW+S + I GKD W VPLTVRG D Y V+++C G Y Sbjct: 61 SDKKLLGTATPIAWISPEAITGKDAIWQVPLTVRGTKQDKTYNVTLNCNTGEISY 115 >UniRef50_A7FJ88 Protein yebF n=33 Tax=Enterobacteriaceae RepID=YEBF_YERP3 Length = 136 Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 5/117 (4%) Query: 1 MKKRGAFLGL--LLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVAR 58 MKK G L L +L+ SV A + + V P C L+ + +A VKRD+ QNR+ R Sbjct: 1 MKKTGLALVLATILLGMMGSVHA---QEPRVVKVPACIGLNQSQVATQVKRDFLQNRIPR 57 Query: 59 WADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEY 115 W D+K +G PV W+++ DI GKDD W VPL RG D YQV +DCK+G Y Sbjct: 58 WEADKKQLGTDKPVVWINVVDIIGKDDIWQVPLIARGNKGDKTYQVVLDCKSGTMTY 114 >UniRef50_Q7N3M3 Protein yebF n=2 Tax=Photorhabdus RepID=YEBF_PHOLL Length = 124 Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Query: 10 LLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWADDQKIVGQA 69 LL VS S + N K F C++L + IAA VKRD+ QNR+ W++D+K +G + Sbjct: 18 LLTVSFTVSAVSENKRVDK---FISCDNLTKSQIAAQVKRDFLQNRINHWSEDRKQLGTS 74 Query: 70 DPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEY 115 PV WV ++I G + +PLTVRG D Y+V VDC+ Y Sbjct: 75 KPVVWVKAENITGDKEILKIPLTVRGSKRDKDYRVVVDCQQNTISY 120 >UniRef50_B6XER8 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6XER8_9ENTR Length = 150 Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Query: 2 KKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWAD 61 KK LG + + F+AN E K+ F C +L IAA VK D+ NR+ RWAD Sbjct: 34 KKMAVVLGGCALVLSSFAFSANKEEGKAAAFVSCGNLTEPQIAAQVKNDFMNNRLPRWAD 93 Query: 62 DQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 ++ VG+ VAW++ ++ ++ + +PL VRG +D+HY+V+V+CK Y Sbjct: 94 EKAAVGK-KAVAWINDNEVTKTEEGYILPLVVRGSKSDLHYRVTVNCKNDTITYN 147 >UniRef50_D1P4X4 Protein YebF n=2 Tax=Providencia RepID=D1P4X4_9ENTR Length = 121 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Query: 2 KKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWAD 61 KK LG + + F+ N + K+ F C +L +AA VK D+ NR+ RW + Sbjct: 5 KKMAVVLGSCALVFSSFAFSVNTDEGKAAPFVSCGNLTEPQVAAQVKSDFMNNRLPRWTE 64 Query: 62 DQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 ++ VG+ VAWV+ ++ DD + VPL VRG +D+HY+V+V+CK Y Sbjct: 65 EKAAVGK-KAVAWVNDSEVTKTDDGYIVPLVVRGSKSDLHYRVAVNCKNNTVTYN 118 >UniRef50_B4EYB7 Putative exported protein n=3 Tax=Proteus RepID=B4EYB7_PROMH Length = 131 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Query: 28 KSVTFPKCEDLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKW 87 +S F C +LD +A VK DY NR+ RW DD+K +G PVA ++ D+ +D+ + Sbjct: 41 RSAPFASCVNLDKEQLATRVKNDYLLNRLPRWQDDKKALG-PKPVANINANDVIKRDNSY 99 Query: 88 SVPLTVRGKSADIHYQVSVDCKAGMAEY 115 V L VRG D+ Y V V+C Y Sbjct: 100 HVILDVRGARTDLRYNVEVNCDENKITY 127 >UniRef50_D2TVU7 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2TVU7_9ENTR Length = 125 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 4/119 (3%) Query: 1 MKKRGAFLGLLLVSACA-SVFAANNETS--KSVTFPKCEDLDAAGIAASVKRDYQQNRVA 57 M + L ++L + + S+ A E + ++ F C++L I+A VK D+ Q R+ Sbjct: 4 MNRLFILLAMILFTLVSFSIMAQPIEINEVRTAKFISCDNLSQQQISAKVKNDFIQTRLP 63 Query: 58 RWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 W +D+K++G V W++ I + + + LTVRG D++YQV V+C+ YQ Sbjct: 64 YWDEDRKLLG-PKVVVWINNNSITPIKNGYKILLTVRGARKDLNYQVIVNCQNETVSYQ 121 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q322G8 Protein yebF n=99 Tax=Enterobacteriaceae RepID=Y... 171 6e-42 UniRef50_B6XER8 Putative uncharacterized protein n=2 Tax=Provide... 163 2e-39 UniRef50_D1P4X4 Protein YebF n=2 Tax=Providencia RepID=D1P4X4_9ENTR 159 2e-38 UniRef50_D1RQX3 Protein YebF n=2 Tax=Enterobacteriaceae RepID=D1... 153 1e-36 UniRef50_A7FJ88 Protein yebF n=33 Tax=Enterobacteriaceae RepID=Y... 153 1e-36 UniRef50_D2TVU7 Putative uncharacterized protein n=1 Tax=Arsenop... 146 2e-34 UniRef50_Q7N3M3 Protein yebF n=2 Tax=Photorhabdus RepID=YEBF_PHOLL 140 1e-32 UniRef50_B4EYB7 Putative exported protein n=3 Tax=Proteus RepID=... 127 1e-28 Sequences not found previously or not previously below threshold: UniRef50_P18002 Colicin-M immunity protein n=18 Tax=root RepID=I... 50 3e-05 UniRef50_C6DJ68 Putative uncharacterized protein n=2 Tax=Pectoba... 47 1e-04 >UniRef50_Q322G8 Protein yebF n=99 Tax=Enterobacteriaceae RepID=YEBF_SHIBS Length = 118 Score = 171 bits (433), Expect = 6e-42, Method: Composition-based stats. Identities = 117/118 (99%), Positives = 117/118 (99%) Query: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWA 60 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCE LDAAGIAASVKRDYQQNRVARWA Sbjct: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWA 60 Query: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR 118 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR Sbjct: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR 118 >UniRef50_B6XER8 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6XER8_9ENTR Length = 150 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Query: 2 KKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWAD 61 KK LG + + F+AN E K+ F C +L IAA VK D+ NR+ RWAD Sbjct: 34 KKMAVVLGGCALVLSSFAFSANKEEGKAAAFVSCGNLTEPQIAAQVKNDFMNNRLPRWAD 93 Query: 62 DQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 ++ VG+ VAW++ ++ ++ + +PL VRG +D+HY+V+V+CK Y Sbjct: 94 EKAAVGK-KAVAWINDNEVTKTEEGYILPLVVRGSKSDLHYRVTVNCKNDTITYN 147 >UniRef50_D1P4X4 Protein YebF n=2 Tax=Providencia RepID=D1P4X4_9ENTR Length = 121 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Query: 2 KKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWAD 61 KK LG + + F+ N + K+ F C +L +AA VK D+ NR+ RW + Sbjct: 5 KKMAVVLGSCALVFSSFAFSVNTDEGKAAPFVSCGNLTEPQVAAQVKSDFMNNRLPRWTE 64 Query: 62 DQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 ++ VG+ VAWV+ ++ DD + VPL VRG +D+HY+V+V+CK Y Sbjct: 65 EKAAVGK-KAVAWVNDSEVTKTDDGYIVPLVVRGSKSDLHYRVAVNCKNNTVTYN 118 >UniRef50_D1RQX3 Protein YebF n=2 Tax=Enterobacteriaceae RepID=D1RQX3_SEROD Length = 119 Score = 153 bits (387), Expect = 1e-36, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 67/116 (57%) Query: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWA 60 MK+ G + + L++ A + ++ +C L A +AA VKRDY QNR+ RWA Sbjct: 1 MKRTGLSVAVALLAMAGLTTAVQAQEQRAAKMAQCTGLQPAEVAAQVKRDYLQNRITRWA 60 Query: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 D+K++G A P+AW+S + I GKD W VPLTVRG D Y V+++C G Y Sbjct: 61 SDKKLLGTATPIAWISPEAITGKDAIWQVPLTVRGTKQDKTYNVTLNCNTGEISYS 116 >UniRef50_A7FJ88 Protein yebF n=33 Tax=Enterobacteriaceae RepID=YEBF_YERP3 Length = 136 Score = 153 bits (387), Expect = 1e-36, Method: Composition-based stats. Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 5/117 (4%) Query: 1 MKKRGAFLGL--LLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVAR 58 MKK G L L +L+ SV A + + V P C L+ + +A VKRD+ QNR+ R Sbjct: 1 MKKTGLALVLATILLGMMGSVHA---QEPRVVKVPACIGLNQSQVATQVKRDFLQNRIPR 57 Query: 59 WADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEY 115 W D+K +G PV W+++ DI GKDD W VPL RG D YQV +DCK+G Y Sbjct: 58 WEADKKQLGTDKPVVWINVVDIIGKDDIWQVPLIARGNKGDKTYQVVLDCKSGTMTY 114 >UniRef50_D2TVU7 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2TVU7_9ENTR Length = 125 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 4/119 (3%) Query: 1 MKKRGAFLGLLLVSACA-SVFAANNETS--KSVTFPKCEDLDAAGIAASVKRDYQQNRVA 57 M + L ++L + + S+ A E + ++ F C++L I+A VK D+ Q R+ Sbjct: 4 MNRLFILLAMILFTLVSFSIMAQPIEINEVRTAKFISCDNLSQQQISAKVKNDFIQTRLP 63 Query: 58 RWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 W +D+K++G V W++ I + + + LTVRG D++YQV V+C+ YQ Sbjct: 64 YWDEDRKLLG-PKVVVWINNNSITPIKNGYKILLTVRGARKDLNYQVIVNCQNETVSYQ 121 >UniRef50_Q7N3M3 Protein yebF n=2 Tax=Photorhabdus RepID=YEBF_PHOLL Length = 124 Score = 140 bits (352), Expect = 1e-32, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Query: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWA 60 + + G G+ L+ + +A +E + F C++L + IAA VKRD+ QNR+ W+ Sbjct: 7 INRVGLS-GVALLLTVSFTVSAVSENKRVDKFISCDNLTKSQIAAQVKRDFLQNRINHWS 65 Query: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 +D+K +G + PV WV ++I G + +PLTVRG D Y+V VDC+ Y Sbjct: 66 EDRKQLGTSKPVVWVKAENITGDKEILKIPLTVRGSKRDKDYRVVVDCQQNTISYS 121 >UniRef50_B4EYB7 Putative exported protein n=3 Tax=Proteus RepID=B4EYB7_PROMH Length = 131 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Query: 28 KSVTFPKCEDLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKW 87 +S F C +LD +A VK DY NR+ RW DD+K +G PVA ++ D+ +D+ + Sbjct: 41 RSAPFASCVNLDKEQLATRVKNDYLLNRLPRWQDDKKALG-PKPVANINANDVIKRDNSY 99 Query: 88 SVPLTVRGKSADIHYQVSVDCKAGMAEY 115 V L VRG D+ Y V V+C Y Sbjct: 100 HVILDVRGARTDLRYNVEVNCDENKITY 127 >UniRef50_P18002 Colicin-M immunity protein n=18 Tax=root RepID=IMMM_ECOLX Length = 141 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 10/113 (8%) Query: 7 FLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWADDQKIV 66 F+ +L + A A+VF + + P C + VK DY Q R+ RW +D +++ Sbjct: 32 FIFILTIIALAAVFFWSEDKG-----PACYQVSDEQARTFVKNDYLQ-RMKRWDNDVQLL 85 Query: 67 GQADP-VAWVSLQ-DIQGKDD--KWSVPLTVRGKSADIHYQVSVDCKAGMAEY 115 G P + W ++ + +D VP G Y C+ G EY Sbjct: 86 GTEIPKITWEKIERSLTDVEDEKTLLVPFKAEGPDGKRMYYGMYHCEEGYVEY 138 >UniRef50_C6DJ68 Putative uncharacterized protein n=2 Tax=Pectobacterium carotovorum RepID=C6DJ68_PECCP Length = 117 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 1/85 (1%) Query: 33 PKCEDLDAAGIAASVKRDYQQNRVARWADDQ-KIVGQADPVAWVSLQDIQGKDDKWSVPL 91 P C+++ + +V+ D ++R+ RW + A P ++ D + +P+ Sbjct: 30 PSCDEITYEQVVTNVQDDLIEHRIPRWLKLRPTSPDIAPPDIIFDKENTSRTVDVYLLPV 89 Query: 92 TVRGKSADIHYQVSVDCKAGMAEYQ 116 TV +CK+G EY Sbjct: 90 TVSYPKKSHQLFAMYECKSGSVEYS 114 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q322G8 Protein yebF n=99 Tax=Enterobacteriaceae RepID=Y... 161 9e-39 UniRef50_B6XER8 Putative uncharacterized protein n=2 Tax=Provide... 151 4e-36 UniRef50_D1P4X4 Protein YebF n=2 Tax=Providencia RepID=D1P4X4_9ENTR 148 5e-35 UniRef50_D1RQX3 Protein YebF n=2 Tax=Enterobacteriaceae RepID=D1... 146 2e-34 UniRef50_A7FJ88 Protein yebF n=33 Tax=Enterobacteriaceae RepID=Y... 145 4e-34 UniRef50_Q7N3M3 Protein yebF n=2 Tax=Photorhabdus RepID=YEBF_PHOLL 142 4e-33 UniRef50_D2TVU7 Putative uncharacterized protein n=1 Tax=Arsenop... 134 6e-31 UniRef50_B4EYB7 Putative exported protein n=3 Tax=Proteus RepID=... 117 9e-26 UniRef50_P18002 Colicin-M immunity protein n=18 Tax=root RepID=I... 111 7e-24 UniRef50_C6DJ68 Putative uncharacterized protein n=2 Tax=Pectoba... 107 8e-23 Sequences not found previously or not previously below threshold: UniRef50_C6CKP2 Putative uncharacterized protein n=1 Tax=Dickeya... 61 1e-08 >UniRef50_Q322G8 Protein yebF n=99 Tax=Enterobacteriaceae RepID=YEBF_SHIBS Length = 118 Score = 161 bits (406), Expect = 9e-39, Method: Composition-based stats. Identities = 117/118 (99%), Positives = 117/118 (99%) Query: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWA 60 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCE LDAAGIAASVKRDYQQNRVARWA Sbjct: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWA 60 Query: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR 118 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR Sbjct: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR 118 >UniRef50_B6XER8 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6XER8_9ENTR Length = 150 Score = 151 bits (382), Expect = 4e-36, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Query: 2 KKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWAD 61 KK LG + + F+AN E K+ F C +L IAA VK D+ NR+ RWAD Sbjct: 34 KKMAVVLGGCALVLSSFAFSANKEEGKAAAFVSCGNLTEPQIAAQVKNDFMNNRLPRWAD 93 Query: 62 DQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 ++ VG+ VAW++ ++ ++ + +PL VRG +D+HY+V+V+CK Y Sbjct: 94 EKAAVGK-KAVAWINDNEVTKTEEGYILPLVVRGSKSDLHYRVTVNCKNDTITYN 147 >UniRef50_D1P4X4 Protein YebF n=2 Tax=Providencia RepID=D1P4X4_9ENTR Length = 121 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Query: 2 KKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWAD 61 KK LG + + F+ N + K+ F C +L +AA VK D+ NR+ RW + Sbjct: 5 KKMAVVLGSCALVFSSFAFSVNTDEGKAAPFVSCGNLTEPQVAAQVKSDFMNNRLPRWTE 64 Query: 62 DQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 ++ VG+ VAWV+ ++ DD + VPL VRG +D+HY+V+V+CK Y Sbjct: 65 EKAAVGK-KAVAWVNDSEVTKTDDGYIVPLVVRGSKSDLHYRVAVNCKNNTVTYN 118 >UniRef50_D1RQX3 Protein YebF n=2 Tax=Enterobacteriaceae RepID=D1RQX3_SEROD Length = 119 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 67/116 (57%) Query: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWA 60 MK+ G + + L++ A + ++ +C L A +AA VKRDY QNR+ RWA Sbjct: 1 MKRTGLSVAVALLAMAGLTTAVQAQEQRAAKMAQCTGLQPAEVAAQVKRDYLQNRITRWA 60 Query: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 D+K++G A P+AW+S + I GKD W VPLTVRG D Y V+++C G Y Sbjct: 61 SDKKLLGTATPIAWISPEAITGKDAIWQVPLTVRGTKQDKTYNVTLNCNTGEISYS 116 >UniRef50_A7FJ88 Protein yebF n=33 Tax=Enterobacteriaceae RepID=YEBF_YERP3 Length = 136 Score = 145 bits (365), Expect = 4e-34, Method: Composition-based stats. Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 5/118 (4%) Query: 1 MKKRGAFLGL--LLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVAR 58 MKK G L L +L+ SV A + + V P C L+ + +A VKRD+ QNR+ R Sbjct: 1 MKKTGLALVLATILLGMMGSVHA---QEPRVVKVPACIGLNQSQVATQVKRDFLQNRIPR 57 Query: 59 WADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 W D+K +G PV W+++ DI GKDD W VPL RG D YQV +DCK+G Y Sbjct: 58 WEADKKQLGTDKPVVWINVVDIIGKDDIWQVPLIARGNKGDKTYQVVLDCKSGTMTYT 115 >UniRef50_Q7N3M3 Protein yebF n=2 Tax=Photorhabdus RepID=YEBF_PHOLL Length = 124 Score = 142 bits (357), Expect = 4e-33, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Query: 1 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWA 60 + + G G+ L+ + +A +E + F C++L + IAA VKRD+ QNR+ W+ Sbjct: 7 INRVGLS-GVALLLTVSFTVSAVSENKRVDKFISCDNLTKSQIAAQVKRDFLQNRINHWS 65 Query: 61 DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 +D+K +G + PV WV ++I G + +PLTVRG D Y+V VDC+ Y Sbjct: 66 EDRKQLGTSKPVVWVKAENITGDKEILKIPLTVRGSKRDKDYRVVVDCQQNTISYS 121 >UniRef50_D2TVU7 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2TVU7_9ENTR Length = 125 Score = 134 bits (338), Expect = 6e-31, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 4/119 (3%) Query: 1 MKKRGAFLGLLLVSACAS-VFAANNETS--KSVTFPKCEDLDAAGIAASVKRDYQQNRVA 57 M + L ++L + + + A E + ++ F C++L I+A VK D+ Q R+ Sbjct: 4 MNRLFILLAMILFTLVSFSIMAQPIEINEVRTAKFISCDNLSQQQISAKVKNDFIQTRLP 63 Query: 58 RWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 W +D+K++G V W++ I + + + LTVRG D++YQV V+C+ YQ Sbjct: 64 YWDEDRKLLG-PKVVVWINNNSITPIKNGYKILLTVRGARKDLNYQVIVNCQNETVSYQ 121 >UniRef50_B4EYB7 Putative exported protein n=3 Tax=Proteus RepID=B4EYB7_PROMH Length = 131 Score = 117 bits (294), Expect = 9e-26, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Query: 28 KSVTFPKCEDLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKW 87 +S F C +LD +A VK DY NR+ RW DD+K +G PVA ++ D+ +D+ + Sbjct: 41 RSAPFASCVNLDKEQLATRVKNDYLLNRLPRWQDDKKALG-PKPVANINANDVIKRDNSY 99 Query: 88 SVPLTVRGKSADIHYQVSVDCKAGMAEY 115 V L VRG D+ Y V V+C Y Sbjct: 100 HVILDVRGARTDLRYNVEVNCDENKITY 127 >UniRef50_P18002 Colicin-M immunity protein n=18 Tax=root RepID=IMMM_ECOLX Length = 141 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 10/113 (8%) Query: 7 FLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWADDQKIV 66 F+ +L + A A+VF + + P C + VK DY Q R+ RW +D +++ Sbjct: 32 FIFILTIIALAAVFFWSEDKG-----PACYQVSDEQARTFVKNDYLQ-RMKRWDNDVQLL 85 Query: 67 GQADP-VAWVSLQ-DIQGKDD--KWSVPLTVRGKSADIHYQVSVDCKAGMAEY 115 G P + W ++ + +D VP G Y C+ G EY Sbjct: 86 GTEIPKITWEKIERSLTDVEDEKTLLVPFKAEGPDGKRMYYGMYHCEEGYVEY 138 >UniRef50_C6DJ68 Putative uncharacterized protein n=2 Tax=Pectobacterium carotovorum RepID=C6DJ68_PECCP Length = 117 Score = 107 bits (268), Expect = 8e-23, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 6/116 (5%) Query: 2 KKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWAD 61 KK+ F L+ V + + + P C+++ + +V+ D ++R+ RW Sbjct: 4 KKKAIFSVLITVVSLSVYKYYSQFIG-----PSCDEITYEQVVTNVQDDLIEHRIPRWLK 58 Query: 62 DQ-KIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 + A P ++ D + +P+TV +CK+G EY Sbjct: 59 LRPTSPDIAPPDIIFDKENTSRTVDVYLLPVTVSYPKKSHQLFAMYECKSGSVEYS 114 >UniRef50_C6CKP2 Putative uncharacterized protein n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKP2_DICZE Length = 116 Score = 60.9 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 7/116 (6%) Query: 2 KKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWAD 61 KK + + + + A +A + T P C ++ + +K D ++ ++R Sbjct: 5 KKTALSVLVTVGALLAYKYAIWS------TGPLCNEVAYEQVMNYIKNDLKRPSISRSIL 58 Query: 62 DQ-KIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ 116 + +G + PV S + + + V V G H +C+ G EY Sbjct: 59 FRLSTLGTSTPVIQFSQNPDLVESETYLVSFQVSGPLKIHHLFAIYECRTGTIEYS 114 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.126 0.341 Lambda K H 0.267 0.0386 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 601,411,918 Number of Sequences: 3077464 Number of extensions: 18630987 Number of successful extensions: 47379 Number of sequences better than 1.0e-01: 11 Number of HSP's better than 0.1 without gapping: 26 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 47334 Number of HSP's gapped (non-prelim): 29 length of query: 118 length of database: 1,040,396,356 effective HSP length: 85 effective length of query: 33 effective length of database: 778,811,916 effective search space: 25700793228 effective search space used: 25700793228 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 87 (38.2 bits)