168 c3fakA_ Probab=99.74   E-value=1.5e-15  Score=111.52  Aligned_columns=247  Identities=14%

Q ss_pred             EEECCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCC-HHHHHHHHHHHHC-CCHHEECCCHHCCCCCCCCCCCCHHH
Q ss_conf             998388998999986078887787489998726898786-5899999999984-98110010322489988776657277
Q batch____        49 RLELPDGDFVDLAWSENPAQAQHKPRLVVFHGLEGSLNS-PYAHGLVEAAQKR-GWLGVVMHFRGCSGEPNRMHRIYHSG  126 (340)
Q Consensus        49 ~~~~~dg~~i~l~~~~~~~~~~~~P~villHG~~g~~~~-~~~~~l~~~l~~~-G~~vv~~d~rG~G~s~~~~~~~~~~~  126 (340)
                      +++-.|++++.++|+.++ +.++.|+||++||.+....+ .....++..++++ |+.|+.+|+|+..+..      ....
T Consensus        45 ~~~~~~~~~~~~~~~~P~-~~~~~P~iv~~HGGg~~~~~~~~~~~~~~~la~~~G~~V~~~~yr~~~~~~------~~~~  117 (297)
T c3fakA_          45 QVEQVTVAGCAAEWVRAP-GCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP------FPAA  117 (297)
T ss_dssp             EEEEEEETTEEEEEEECT-TCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC------TTHH
T ss_pred             EEEEEECCCEEEEEEECC-CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCC------CCHH
T ss_conf             572565188059999668-898870899976986532122436899999998459299982776444454------7447


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH--HHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8999999999999854976188524564899999999--97898533213441256467367677776566665223445
Q batch____       127 ETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLACLL--AKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLL  204 (340)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ia~~~a--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (340)
                      ..+.....................+.|.||..+...+  ............+..++..+......               
T Consensus       118 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---------------  182 (297)
T c3fakA_         118 VEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTND---------------  182 (297)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCT---------------
T ss_pred             HHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH---------------
T ss_conf             99999999730344458775255311322210347788752047532234411035347654652---------------


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCC
Q ss_conf             57889998764312343336889898633100016877653135532110001234167631489988999847898079
Q batch____       205 NLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIHAKDDPFMD  284 (340)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~g~~D~~vp  284 (340)
                                          ...................................++.........|+|+++|++|..++
T Consensus       183 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~  242 (297)
T c3fakA_         183 --------------------SFKTRAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLLD  242 (297)
T ss_dssp             --------------------HHHHTTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTHH
T ss_pred             --------------------HHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHH
T ss_conf             --------------------456401346554214677641147764334460158101112478515999769762305


Q ss_pred             --HHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             --99999999958997999988998531103888431236999999999997211
Q batch____       285 --HQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTYLEA  337 (340)
Q Consensus       285 --~~~~~~~~~~~p~~~l~~~~~~GH~~f~~~~~~~~~~w~~~~i~~fL~~~l~~  337 (340)
                        ....+++++....++++++++++|..++-........-..+.|.+||++|+.+
T Consensus       243 ~s~~~~~~L~~~G~~vel~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~~~~  297 (297)
T c3fakA_         243 DSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAA  297 (297)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             8999999999779967999988896102135668989999999999999987379