159 c3k30B_ Probab=98.64   E-value=4.1e-06  Score=52.05  Aligned_columns=137  Identities=15%

Q ss_pred             HHHHHHHHHCCCCEEEE-------------------------CCHHH--------HHHHHHHCCCCCEEEECCCCCCCHH
Q ss_conf             99999999789919982-------------------------99899--------9999986087620001156654302
Q batch____        36 AAMALAAEQAGAVAIRI-------------------------EGVAN--------LQATRAVVSVPIIGIVKRDLEDSPV   82 (229)
Q Consensus        36 ~~~A~~a~~~Ga~~i~~-------------------------~~~e~--------i~~ir~~~~~Pii~~~k~~~~~~~v   82 (229)
                      .+.|+++.++|.+++.+                         +++|+        +++||+.++..+....|.+......
T Consensus       153 ~~aA~~a~~aG~Dgveih~ahgyl~~~qFlsp~~N~R~D~yGGs~enR~rf~~evi~~ir~~~g~d~~i~~r~~~~~~~~  232 (684)
T c3k30B_         153 RNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEID  232 (684)
T ss_dssp             HHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHSSSSEEEEEEESCCCST
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCC
T ss_conf             99999999739988998448874105431265456366765888777376899999999996499947999846453668


Q ss_pred             HCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCEEEEECCC-----C
Q ss_conf             20340899999996399899993078898689999999963358199943899899999996189899994135-----8
Q batch____        83 RITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSG-----Y  157 (229)
Q Consensus        83 ~~~~~~~~i~~~~~aGad~v~i~~~~~~~~~~~~~~~~~~~~~gi~vi~~v~t~~~a~~~~~~G~d~i~v~~~g-----~  157 (229)
                      .                         ....++..++                    ++.+.+ +.|++-++.++     .
T Consensus       233 ~-------------------------g~~~~e~~~~--------------------~~~l~~-~~d~~~vs~g~~~~~~~  266 (684)
T c3k30B_         233 G-------------------------GITREDIEGV--------------------LRELGE-LPDLWDFAMGSWEGDSV  266 (684)
T ss_dssp             T-------------------------SCCHHHHHHH--------------------HHHHTT-SSSEEEEECSSHHHHSC
T ss_pred             C-------------------------CCCHHHHHHH--------------------HHHHHC-CCCEEEEECCCCCCCCC
T ss_conf             8-------------------------8899999999--------------------999854-85499973275566555


Q ss_pred             CCCCCCCCHHHHHHHHHCC-CCCEEEEECCCCCHHHHHHHHHCC-CCEEEECHH-HCCHHHHHH
Q ss_conf             8765773027999996123-473089826869989999999749-989999024-259589999
Q batch____       158 TTPETPEEPDLALVKTLSD-AGCRVIAEGRYNTPAQAADAMRHG-AWAVTVGSA-ITRLEHICQ  218 (229)
Q Consensus       158 ~g~~~~~~~~~~l~~~~~~-~~~pvia~GGI~~~~~v~~~~~~G-Ad~VvVGsA-i~~~~~i~~  218 (229)
                      ............+.+.+++ +++||++.|+|.+|+.+.++++.| ||.|.+|.+ |..|+++.+
T Consensus       267 ~~~~~~~~~~~~~~~~ik~~~~~pv~~~g~~~~~~~a~~~l~~g~~D~v~~~R~~~adP~~~~k  330 (684)
T c3k30B_         267 TSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNK  330 (684)
T ss_dssp             CTTTCCTTTTHHHHTTTGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCHHHHCHHHHHH
T ss_conf             7655776540789999998609979998788999999999978996599983076618368999