340 c3fluD_ Probab=93.85   E-value=0.43  Score=25.33  Aligned_columns=152  Identities=16%

Q ss_pred             EECCCCCCCHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCH-------HHHHHHHHHHHHCCCEEEECCCCH------HH
Q ss_conf             01156654302203408999999963998999930788986-------899999999633581999438998------99
Q batch____        72 IVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRP-------VPVETLLARIHHHGLLAMTDCSTP------ED  138 (229)
Q Consensus        72 ~~k~~~~~~~v~~~~~~~~i~~~~~aGad~v~i~~~~~~~~-------~~~~~~~~~~~~~gi~vi~~v~t~------~~  138 (229)
                      +..+|.....+-.....+.++.+.+.|++++.+..+..+-+       ..+.+...+.-...+.+++.+...      +.
T Consensus        11 ~~TPf~~dg~iD~~~~~~~~~~l~~~Gv~gi~~~G~tGE~~~Ls~~Er~~i~~~~~~~~~~~~~vi~gv~~~~~~~~i~~   90 (293)
T c3fluD_          11 LITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIAL   90 (293)
T ss_dssp             CCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHH
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
T ss_conf             00781898884889999999999977998999877235702179999999999999960899739996588999999999


Q ss_pred             HHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCC-CCCEEE------EECCCCCHHH-------------------
Q ss_conf             99999618989999413588765773027999996123-473089------8268699899-------------------
Q batch____       139 GLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSD-AGCRVI------AEGRYNTPAQ-------------------  192 (229)
Q Consensus       139 a~~~~~~G~d~i~v~~~g~~g~~~~~~~~~~l~~~~~~-~~~pvi------a~GGI~~~~~-------------------  192 (229)
                      ++.+++.|+|.+.+..-.+  .........+..+.+.+ +++|++      ..|-..+++.                   
T Consensus        91 a~~a~~~Gad~v~~~pP~~--~~~s~~~i~~~~~~ia~~~~~pi~~Yn~P~~tg~~~s~~~~~~L~~~~~v~giK~s~~d  168 (293)
T c3fluD_          91 SQAAEKAGADYTLSVVPYY--NKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKEASGN  168 (293)
T ss_dssp             HHHHHHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHTCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECSCC
T ss_pred             HHHHHHCCCCEEEECCCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCC
T ss_conf             9999854998999938878--89998899999999997549989999675333677598999998347988899638899


Q ss_pred             ------------------------HHHHHHCCCCEEEECHHHCCHHHHHHHHHHHHH
Q ss_conf             ------------------------999997499899990242595899999999999
Q batch____       193 ------------------------AADAMRHGAWAVTVGSAITRLEHICQWYNTAMK  225 (229)
Q Consensus       193 ------------------------v~~~~~~GAd~VvVGsAi~~~~~i~~~f~~~~k  225 (229)
                                              +...+..|++|.+-|.+=.-|+...+.|....+
T Consensus       169 ~~~~~~l~~~~~~~~~v~~G~d~~~~~~l~~G~~G~~~~~~n~~P~~~~~~~~a~~~  225 (293)
T c3fluD_         169 IGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMCRAALQ  225 (293)
T ss_dssp             HHHHHHHHHHSCTTCEEEECCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             899999998639987999487799999998377412898998869999999999986