352 c1ii0A_ Probab=95.67   E-value=0.0066  Score=36.35  Aligned_columns=261  Identities=18%

Q ss_pred             CEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCHHCCCC
Q ss_conf             88999879998888999999468748721799867888789988898459379815510086885899987120003365
Q batch____        36 EIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFG  115 (500)
Q Consensus        36 e~~~lvG~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~tv~eni~~~~~~~~~~  115 (500)
                      .++.+-|+-|.||||+.-.++-.+.-..=++.+-..+. ..+..+......+..+......+++.+.+            
T Consensus         9 r~~~~sGKGGvGKTTvaa~lA~~LA~~G~rvLlVd~Dp-a~sL~~~lg~~~~~~~~~v~~~~~L~a~e------------   75 (550)
T c1ii0A_           9 PYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP-ASNVGQVFSQTIGNTIQAIASVPGLSALE------------   75 (550)
T ss_dssp             SEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT-TCCHHHHTTSCCCSSCEECTTSTTEEEEE------------
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC-CCCHHHHHCCCCCCCCEECCCCCCCEEEE------------
T ss_conf             89999579998889999999999998799499998889-98805881886767721214767832666------------


Q ss_pred             CCCH----HHHHHHHHHHHHHCCCCHHCCCCHHHCCHH-------HHHHHHHHH--HHHCCCCEEEECCCCC--------
Q ss_conf             8898----999999999997618410206846889989-------999999998--8745996999718200--------
Q batch____       116 LLRR----KEMEKRATELMASYGFSLDVREPLNRFSVA-------MQQIVAICR--AIDLSAKVLILDEPTA--------  174 (500)
Q Consensus       116 ~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG-------e~qrv~ia~--al~~~~~iliLDEPt~--------  174 (500)
                       ++.    .+........+..+--..........+++.       ......+..  .+..+-+++|.|-|-+        
T Consensus        76 -id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ll~~~~~~~~yD~iIvD~aPtg~tlrlL~  154 (550)
T c1ii0A_          76 -IDPQAAAQQYRARIVDPIKGVLPDDVVSSINEQLSGACTTEIAAFDEFTGLLTDASLLTRFDHIIFDTAPTGHTIRLLQ  154 (550)
T ss_dssp             -CCHHHHHHHHHHHHHHHHBTTBCHHHHHHHHHHTSSHHHHHHHHHHHHHHHHTCTTHHHHCSEEEESSCCCHHHHHHHH
T ss_pred             -ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
T ss_conf             -5678999999974121022210211023443202782135777589999997312220243279980898778888865


Q ss_pred             ---------------------------------------------------CCCHHHHHHHHHHHHHHHHCCCEE--EEE
Q ss_conf             ---------------------------------------------------289899999999999987518739--999
Q batch____       175 ---------------------------------------------------SLDTQEVELLFDLMRQLRDRGVSL--IFV  201 (500)
Q Consensus       175 ---------------------------------------------------~LD~~~~~~l~~~l~~l~~~g~tv--i~v  201 (500)
                                                                         --+..+.....+....+++.|..+  ++|
T Consensus       155 lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~d~~~t~~~lV~~Pe~~~i~e~~r~~~~L~~~gi~v~~lVv  234 (550)
T c1ii0A_         155 LPGAWSSFIDSNPEGASCLGPMAGLEKQREQYAYAVEALSDPKRTRLVLVARLQKSTLQEVARTHLELAAIGLKNQYLVI  234 (550)
T ss_dssp             CTHHHHCCCCCCSSSGGGTGGGGGCCSCHHHHHHHHHHHTCTTTEEEEEEECSCHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             47777776643212566766652000013779999998327686569999368354699999999999985998558998


Q ss_pred             ECCCHHHHHHCCEEEEEECCEEEEEEEHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC--
Q ss_conf             156066786268699982465898500344886889986300212222222222333322233200001784211475--
Q batch____       202 THFLDQVYQVSDRITVLRNGSFVGCRETCELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPF--  279 (500)
Q Consensus       202 tH~~~~~~~~~Dri~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v--  279 (500)
                      -.-+..-...        +..+.......+......+...+ ..++....+-........+.+..+-+........+.  
T Consensus       235 N~v~p~~~~~--------~~~~~~~~~~~q~~~l~~i~~~~-~~~~~~~~p~~~~e~~G~~~L~~~~~~~~~~~~~~~~~  305 (550)
T c1ii0A_         235 NGVLPKTEAA--------NDTLAAAIWEREQEALANLPADL-AGLPTDTLFLQPVNMVGVSALSRLLSTQPRPDIPSLSA  305 (550)
T ss_dssp             EEECCSTTSS--------SCSHHHHHHHHHHHHHHSCCHHH-HTSCEEEEECCSSCCCSHHHHHHTTCSCCCCCCCBHHH
T ss_pred             EEEECCCCCC--------CCHHHHHHHHHHHHHHHHHHHHH-CCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHH
T ss_conf             0023155478--------54489999999999999999860-79958992367767100788987403765334532346


Q ss_pred             ---CEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEE
Q ss_conf             ---1146651010001322222110699998642035884698
Q batch____       280 ---DLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALI  319 (500)
Q Consensus       280 ---s~~i~~Ge~v~i~G~nGsGKsTLl~~L~g~~~~~~G~i~~  319 (500)
                         .+.-.+..++.+.|+.|.||||+...|+-.+...+-++.+
T Consensus       306 ~~~~~~~~~~rii~~sGKGGvGKTTvaa~lA~~lA~~G~rVll  348 (550)
T c1ii0A_         306 LVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHL  348 (550)
T ss_dssp             HHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred             HHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf             7764035881799980478774147999999998603896899