Job Description P33129 Confidence 99.72% Date Thu Jan 5 11:51:11 GMT 2012 Rank 9 Aligned Residues 80 % Identity 23% Template c3l48B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:outer membrane usher protein papc; PDBTitle: crystal structure of the c-terminal domain of the papc usher Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		776	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	S	A	I	M	N	I	T	R	S	D	G	K	N	I	P	F	A	A	D	I	Y	D	E	Q	G	N	V	I	G	N	V	G	Q	G	G	Q	A	F	V	R	G	I	E	Q	Q	G	N	I	S	I	K	W	L	E	Q	S	K	P	V	S	C	L	A	H	Y	Q	Q	S	P	E	A	E	K	I	A	Q	S	I
Query Conservation
Alig confidence																																																									.	.	.																		.	.	.	.	.
Template Conservation																																																									.	.	.																		.	.	.	.	.
Template Sequence		G	K	R	L	F	A	I	L	R	L	A	D	G	S	Q	P	P	F	G	A	S	V	T	S	E	K	G	R	E	L	G	M	V	A	D	E	G	L	A	W	L	S	G	V	T	P	G	E	T	L	S	V	N	W	D	.	.	.	G	K	I	Q	C	Q	V	N	V	P	E	T	A	I	S	D	Q	.	.	.	.	.
Template Known Secondary structure												T	T	S					T	T						T	T	S								G	G	G									T	T								T	.	.	.	T										T	T			T	T		.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.																		.	.	.	.	.
Template SS confidence
		728	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.				.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
		856	.	.	.	860	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	N	G	I	R	C	Q	I
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	Q	L	L	L	P	C	T	P
Template Known Secondary structure		.							B
Template Predicted Secondary structure		.
Template SS confidence
			800	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions