35 d1jhda2 Probab=98.76   E-value=2.2e-06  Score=53.40  Aligned_columns=178  Identities=15%

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC---CCCCEEEEEHHHC
Q ss_conf             8508995489983458999999999997299859999727571023679998999999999955---8997899503301
Q batch____         2 KSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSVQRKHMLELAIA---DKPLFTLDERELK   78 (213)
Q Consensus         2 ~~~i~i~~GSFnP~H~GH~~~i~~a~~~~~~d~i~vi~s~~~~~k~~~~~~~~~R~~~~~~a~~---~~~~i~v~~~e~~   78 (213)
                      ++++|.-  +.||+|.||.++++.|.+....+.+++.|...  .++.+.++.+.|+.-.+..++   .-..+.++.+...
T Consensus        20 ~~VvafQ--trnP~Hr~He~l~~~a~e~~~a~glli~plvG--~tk~gdip~~~r~~~~~~l~~~y~p~~~~~l~~lp~~   95 (223)
T d1jhda2          20 SKVVAFQ--TRNPMHRAHEELCRMAMESLDADGVVVHMLLG--KLKKGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGFD   95 (223)
T ss_dssp             SSEEEEE--ESSCCCHHHHHHHHHHHHHHTCSEEEEEEEEC--CCCTTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEECC
T ss_pred             CEEEEEE--ECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEC--CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf             1689973--08888889999999999971558449976305--7777887888999999999961599000888730550


Q ss_pred             CCCCEEEHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCH
Q ss_conf             78962519999999997387776699618368863232002899996549999936898744110789999897511212
Q batch____        79 RNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNP  158 (213)
Q Consensus        79 ~~~~~~t~~~l~~l~~~~~~~~~~~~~~G~D~~~~i~~w~~~~~l~~~~~~~v~~R~~~~~~~~~~~~~~~~~~~~~~~~  158 (213)
                      ---....=..+-.+..+  ...-..|++|-|-.                        |-..-.........+.......-
T Consensus        96 m~yAGPrEal~hAiir~--N~GcthfIvGrDHA------------------------g~g~~Y~~~~aq~i~~~~~~~~~  149 (223)
T d1jhda2          96 MLYAGPREAVLHAYFRQ--NMGATHFIIGRDHA------------------------GVGDYYGAFDAQTIFDDEVPEGA  149 (223)
T ss_dssp             CCCCTHHHHHHHHHHHH--HTTCSEEEECTTTT------------------------CCTTCSCTTHHHHHHHHTSCTTS
T ss_pred             HHHCCCHHHHHHHHHHH--HCCCCEEEECCCCC------------------------CCHHCCCCHHHHHHHHHCCCCCC
T ss_conf             11158428999999998--76985899768998------------------------82000785789999972034455


Q ss_pred             HHHHCCCCCEEEEECCCC----------------CCCCHHHHHHHHHCCCCH-HHCCCHHHHHHHHHC
Q ss_conf             454206798599951766----------------574889999999859895-473999999999971
Q batch____       159 EDLHLQPAGKIYLAETPW----------------FNISATIIRERLQNGESC-EDLLPEPVLTYINQQ  209 (213)
Q Consensus       159 ~~~~~~~~~~i~~~~~~~----------------~~iSST~IR~~~~~~~~i-~~~vP~~v~~yi~~~  209 (213)
                      ..+.......+.+.+...                ..||+|++|+++.+|... ..++.|+|.+.|.++
T Consensus       150 l~i~~~~~~~~~Y~~~~~~~~~~~~cp~h~~~~~~~iSGt~lR~llr~G~~pP~~f~rPeV~~iL~~~  217 (223)
T d1jhda2         150 MEIEIFRADHTAYSKKLNKIVMMRDVPDHTKEDFVLLSGTKVREMLGQGIAPPPEFSRPEVAKILMDY  217 (223)
T ss_dssp             CSCEEEECCCEEEETTTTEEEEGGGCTTCCGGGEECCCHHHHHHHHHTTCCCCTTTCCHHHHHHHHHH
T ss_pred             CCEEEEECCCEEEECCCCEEEEHHHCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf             66068970623875124928775547986645323228899999997788889753624799999999