50 d2vcha1 Probab=97.90   E-value=0.0015  Score=39.33  Aligned_columns=349  Identities=11%

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHH-HHCCCEEEEEECCCCCCCHHHHHCC----CEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf             9998179888863899999999999-9879869999727887520244239----7289804645544134368999999
Q batch____         3 IAFIGEAVSGFGGMETVIRDVITTF-RQQHIQSEMFFFCRNDKMDKGWLEG----IKYSCSFSNIRLGFLRRAKHIHALS   77 (359)
Q Consensus         3 Il~i~~~~~~~GG~~~~~~~l~~~L-~~~g~~v~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~   77 (359)
                      |+|+..   +..|--.-+..+++.| ..+||+|++++.......-......    .......................+.
T Consensus         4 il~~~~---~~~GH~~p~l~lA~~L~~~rGH~Vt~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (462)
T d2vcha1           4 VAIIPS---PGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSAQRTVLDLPSSISSVFLPPVDLTDLSSSTRIESRIS   80 (462)
T ss_dssp             EEEECC---SCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCCCHHHHHCCCTTEEEEECCCCCCTTSCTTCCHHHHHH
T ss_pred             EEEECC---CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             999789---88423389999999999835987999977132367885036546675300027532235333355589999


Q ss_pred             HHHHH----------------CCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCH----------------------
Q ss_conf             99744----------------0884899616651467788764203776333332102----------------------
Q batch____        78 KWLQE----------------YQPDIVICIDVISCLFAAKARKKSGIDMPVFSWPHFS----------------------  119 (359)
Q Consensus        78 ~~~~~----------------~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  119 (359)
                      .....                ..+|++...............................                      
T Consensus        81 ~~~~~~~~~l~~~~~~~~~~~~~~d~~i~d~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (462)
T d2vcha1          81 LTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTE  160 (462)
T ss_dssp             HHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCGGGCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf             99999899999999986423578631033233005899999828992887267305878740576421114665545310


Q ss_pred             ---------------------------HHHHHHHHHHHHCCEEEECC-----HHHHHHHHHHCCCCCCCEEECCCCCCCC
Q ss_conf             ---------------------------34566667776349898489-----8999999981787322133102332223
Q batch____       120 ---------------------------LDHKKHAEYITCADYHLAIS-----SGIKQQMINRGVAESTINVIFNPVETKD  167 (359)
Q Consensus       120 ---------------------------~~~~~~~~~~~~~d~ii~~S-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (359)
                                                 ............++..+..+     ...-..+.........+..+........
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vGp~~~~~~  240 (462)
T d2vcha1         161 PLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGK  240 (462)
T ss_dssp             CBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCCCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCHHHHCCCHHHHHCCCCCCCCCEEEECCCCCCCC
T ss_conf             00223344578877568886300126799998631266677686343464042100100122346884688436677788


Q ss_pred             CCCCCCC------CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----
Q ss_conf             4532224------55445402322003268788889898776521012222223334421011112222223344-----
Q batch____       168 SVIPAPE------EGETATFIYVGRMKFEGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYGRELNIDDRI-----  236 (359)
Q Consensus       168 ~~~~~~~------~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  236 (359)
                      .......      ..+...++..|.........+..+++++..................................     
T Consensus       241 ~~~~~~~~~~~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~~  320 (462)
T d2vcha1         241 QEASECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSQTDPLTFLPPGFLE  320 (462)
T ss_dssp             SCCCHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCCCSCGGGGSCTTHHH
T ss_pred             CCCCHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             88651467887087898289524764328899999999999852787999625866443222355555421128911677


Q ss_pred             -----CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCHHH----HHHCCCEEEEECCC
Q ss_conf             -----322222221001699986310012100225788501011468852899788887578----74079704997699
Q batch____       237 -----VWYGWQQYPWELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPAD----IIQPDVNGHLYQPG  307 (359)
Q Consensus       237 -----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~lEAma~G~PvI~s~~~gg~~e----~i~~~~~G~l~~~~  307 (359)
                           ++....+.++..+.. ...+++++.-    |...++.||+.+|+|.|+....+-..+    +.+.-..|..+.+.
T Consensus       321 ~~~~~nv~v~~~vPq~~lL~-hp~~~~~ItH----GG~gs~~eal~~GvP~i~~P~~~DQ~~nA~ri~e~~G~Gv~l~~~  395 (462)
T d2vcha1         321 RTKKRGFVIPFWAPQAQVLA-HPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG  395 (462)
T ss_dssp             HTTTTEEEEESCCCHHHHHH-STTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC
T ss_pred             HHCCCCEEEECCCCHHHHHC-CCCCCEEEEC----CCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCEEEEECC
T ss_conf             61689869942789789825-8785689971----881168989971898887156223114899998650625785068


Q ss_pred             C-----HHHHHHHHHHHHCCHH-HHHHHHHHHHHHHCC-----HHHHHHHHHHHHHHHHHHCC
Q ss_conf             9-----8999999999975989-999999999997309-----99999999999999986219
Q batch____       308 D-----IAGFVTLLNKYIAGEI-HIEHEKIPASIDEFY-----QSKYYDRLHKVIISAISRRK  359 (359)
Q Consensus       308 d-----~~~la~~i~~l~~~~~-~~~~~~~~~~~~~fs-----~~~~~~~~~~~~~~~i~~kk  359 (359)
                      +     .++++++|.++++|++ ...++++++..+.-.     -....+.+++++.+..+.||
T Consensus       396 ~~~~~~~e~i~~ai~~vl~de~~~~~r~~a~~l~~~~~~a~~~~G~s~~~~~~l~~~~~~~~~  458 (462)
T d2vcha1         396 DDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHKK  458 (462)
T ss_dssp             TTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             777758899999999984494179999999999999999842288138999999999996324


