 |
| Job Description | P27127 | | Confidence | 44.60% | Date | Thu Jan 5 11:43:14 GMT 2012 |
| Rank | 204 | Aligned Residues | 49 |
| % Identity | 18% | Template | c2f00A_ |
| PDB info |
PDB header:ligase | Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; |
PDBTitle: escherichia coli murc
|
| Resolution | 2.50 Å |
|
 |
|   |   |
1 | . | |
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
| Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | K | . |
I | A | F | I | G | E | A | V | S | G | F | G | G | M | E | T | V | I | R | D | V | I | T | T | F | R | Q | Q | H | I | Q | S | E | M | F | F | F | C | R | N | D | K | M | D | K | G | W | L | E | G | I | K | Y | S |
| Query Conservation |   |
|
| . |
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
| . |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|   |   |
| . | . | . | . | . |
|   |
|
|   |
|   |
|   |
| . | . |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
| Template Sequence |   |
V | R | H | I | H | F | V | . |
. |
. |
. |
. |
G | I | G | G | A | G | X | G | G | I | . |
. |
A | E | V | L | A | N | E | G | Y | Q | I | S | G | S | D | L | A | P | N | P | V | T | Q | Q | L | X | N | L | G | A | T | I | Y |
| Template Known Secondary structure |   |
|
|  |  |  |  |  | . | . | . | . | . | T | T | T | S | T | T |  |  |  |  | . | . |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  | T | T |
|  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
19 | 20 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|