BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (315 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ABJ2 Ubiquinol oxidase subunit 2 n=150 Tax=Proteobact... 654 0.0 UniRef50_Q9I427 Ubiquinol oxidase subunit 2 n=143 Tax=Proteobact... 359 8e-98 UniRef50_Q2SXM9 Ubiquinol oxidase, subunit II n=79 Tax=cellular ... 334 2e-90 UniRef50_C6BF43 Ubiquinol oxidase, subunit II n=10 Tax=Proteobac... 329 9e-89 UniRef50_A9IQC4 Ubiquinol oxidase polypeptide II n=1 Tax=Bordete... 320 3e-86 UniRef50_C3K1U7 Cytochrome C oxidase (Ubiquinol oxidase) subunit... 320 5e-86 UniRef50_B4SM49 Ubiquinol oxidase, subunit II n=4 Tax=Proteobact... 314 3e-84 UniRef50_Q2C912 Cytochrome o ubiquinol oxidase, subunit II n=1 T... 313 7e-84 UniRef50_C0RGA6 Ubiquinol oxidase, subunit II n=37 Tax=Proteobac... 311 2e-83 UniRef50_Q8K993 Ubiquinol oxidase subunit 2 n=6 Tax=Gammaproteob... 308 1e-82 UniRef50_Q4K7G6 Cytochrome o ubiquinol oxidase, subunit II n=1 T... 303 4e-81 UniRef50_Q2C3Z7 Cytochrome O ubiquinol oxidase subunit II n=3 Ta... 298 1e-79 UniRef50_P57544 Ubiquinol oxidase subunit 2 n=4 Tax=Buchnera aph... 297 3e-79 UniRef50_Q0KB46 Bo3-type quinol oxidase, subunit II n=2 Tax=Burk... 297 4e-79 UniRef50_B3QMY7 Ubiquinol oxidase, subunit II n=1 Tax=Chlorobacu... 296 6e-79 UniRef50_C5SNE1 Ubiquinol oxidase, subunit II n=1 Tax=Asticcacau... 292 1e-77 UniRef50_C4XNK3 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 289 7e-77 UniRef50_Q89AA3 Ubiquinol oxidase subunit 2 n=1 Tax=Buchnera aph... 278 1e-73 UniRef50_Q5FPP7 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 276 6e-73 UniRef50_Q6F9R5 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 276 9e-73 UniRef50_C9YAW0 Ubiquinol oxidase subunit 2 n=1 Tax=Curvibacter ... 275 1e-72 UniRef50_Q8L312 Cytochrome bo subunit A n=1 Tax=Vitreoscilla sp.... 275 2e-72 UniRef50_A1BCC4 Ubiquinol oxidase, subunit II n=36 Tax=Proteobac... 273 5e-72 UniRef50_B0VM15 Cytochrome o ubiquinol oxidase subunit II n=14 T... 271 3e-71 UniRef50_B0UDY1 Ubiquinol oxidase, subunit II n=26 Tax=Proteobac... 270 5e-71 UniRef50_Q0BNW9 Cytochrome o ubiquinol oxidase subunit II n=16 T... 266 6e-70 UniRef50_Q1GEA0 Ubiquinol oxidase subunit II n=2 Tax=Proteobacte... 264 4e-69 UniRef50_C6XEZ5 Ubiquinol oxidase, subunit II n=1 Tax=Candidatus... 263 6e-69 UniRef50_D0ST29 Ubiquinol oxidase, subunit II n=2 Tax=Acinetobac... 260 6e-68 UniRef50_A4G8I7 Ubiquinol oxidase subunit 2 (Ubiquinol oxidase p... 256 9e-67 UniRef50_Q0FH64 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 252 1e-65 UniRef50_A0NWL4 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia ... 249 1e-64 UniRef50_B9R6J2 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia ... 249 1e-64 UniRef50_Q057E8 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 248 1e-64 UniRef50_C8SDL6 Ubiquinol oxidase, subunit II n=1 Tax=Mesorhizob... 240 5e-62 UniRef50_A9KG38 Cytochrome c oxidase polypeptide II n=7 Tax=Legi... 238 1e-61 UniRef50_B6YZ13 Ubiquinol oxidase, subunit II n=1 Tax=Pseudovibr... 238 2e-61 UniRef50_D0D3A4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella ... 238 2e-61 UniRef50_Q6MBY6 Probable cytochrome o ubiquinol oxidase chain II... 233 8e-60 UniRef50_A1UU71 Cytochrome o ubiquinol oxidase, subunit II n=5 T... 229 1e-58 UniRef50_C6CSR8 Quinol oxidase AA3, subunit II n=2 Tax=Paenibaci... 217 3e-55 UniRef50_A4YQP6 Cytochrome o ubiquinol oxidase, subunit II n=3 T... 212 1e-53 UniRef50_D0DDN4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella ... 211 3e-53 UniRef50_C8WSR0 Cytochrome c oxidase subunit II n=1 Tax=Alicyclo... 207 4e-52 UniRef50_C0Z7C6 Quinol oxidase polypeptide II n=1 Tax=Brevibacil... 207 4e-52 UniRef50_Q1NHQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Sphingomo... 197 5e-49 UniRef50_C6NXQ9 Cytochrome O ubiquinol oxidase subunit II n=1 Ta... 193 7e-48 UniRef50_Q0AI63 Cytochrome c oxidase, subunit II n=1 Tax=Nitroso... 192 2e-47 UniRef50_B5ENJ7 COX aromatic rich domain protein n=4 Tax=Acidith... 192 2e-47 UniRef50_B9NVN8 CytOchrome o ubiquinol oxidase, subunit II n=2 T... 191 3e-47 UniRef50_C1PAT6 Quinol oxidase AA3, subunit II n=1 Tax=Bacillus ... 176 1e-42 UniRef50_Q725F6 Quinol oxidase AA3, subunit II n=17 Tax=Listeria... 166 1e-39 UniRef50_A5FXH9 Cytochrome c oxidase, subunit II n=1 Tax=Acidiph... 165 2e-39 UniRef50_Q4L565 Probable quinol oxidase subunit 2 n=63 Tax=Bacil... 164 4e-39 UniRef50_P34957 Quinol oxidase subunit 2 n=10 Tax=Bacillales Rep... 164 4e-39 UniRef50_Q81HT3 Quinol oxidase subunit 2 n=80 Tax=Bacillaceae Re... 160 6e-38 UniRef50_A0R9Y2 Quinol oxidase, subunit 2 (Cytochrome c oxidase,... 159 8e-38 UniRef50_B7DNN6 Cytochrome c oxidase subunit II n=1 Tax=Alicyclo... 149 2e-34 UniRef50_B1HVF0 Quinol oxidase subunit 2 n=6 Tax=Bacillaceae Rep... 149 2e-34 UniRef50_C6IYM5 Quinol oxidase subunit II n=2 Tax=Bacillales Rep... 148 3e-34 UniRef50_C8WTG4 Cytochrome c oxidase subunit 2 n=2 Tax=Alicyclob... 147 7e-34 UniRef50_A3K373 Cytochrome o ubiquinol oxidase, subunit II n=1 T... 142 1e-32 UniRef50_Q05FH0 Cytochrome O ubiquinol oxidase subunit II n=1 Ta... 133 8e-30 UniRef50_Q67ML2 Cytochrome c oxidase subunit 2 n=1 Tax=Symbiobac... 109 1e-22 UniRef50_Q5SLI2 Cytochrome c oxidase subunit 2 n=4 Tax=Thermus R... 107 5e-22 UniRef50_B1YIW4 Cytochrome c oxidase subunit 2 n=2 Tax=Exiguobac... 104 5e-21 UniRef50_Q04441 Cytochrome c oxidase subunit 2 n=5 Tax=Bacillus ... 98 3e-19 UniRef50_C0Z582 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillale... 98 4e-19 UniRef50_D2RSI3 Cytochrome c oxidase, subunit II n=1 Tax=Haloter... 94 5e-18 UniRef50_Q5P900 Chain II protein of putative cytochrome c oxidas... 94 8e-18 UniRef50_A7NPW1 Cytochrome c oxidase subunit 2 n=2 Tax=Roseiflex... 93 1e-17 UniRef50_Q8ER77 Cytochrome c oxidase subunit 2 n=1 Tax=Oceanobac... 92 2e-17 UniRef50_Q2IK63 Cytochrome c oxidase, subunit II n=3 Tax=Anaerom... 88 4e-16 UniRef50_C6D2I7 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillale... 87 6e-16 UniRef50_C5D863 Cytochrome c oxidase subunit 2 n=87 Tax=cellular... 87 7e-16 UniRef50_C6IYW1 Cytochrome c oxidase subunit 2 n=1 Tax=Paenibaci... 86 2e-15 UniRef50_B5WPG4 Cytochrome c oxidase, subunit II n=2 Tax=Burkhol... 85 3e-15 UniRef50_B1ZVF0 Cytochrome c oxidase subunit 2 n=2 Tax=Verrucomi... 84 6e-15 UniRef50_B4WPA2 Cytochrome c oxidase subunit 2 n=2 Tax=Cyanobact... 84 9e-15 UniRef50_Q3SQ74 Cytochrome c oxidase, subunit II n=1 Tax=Nitroba... 83 1e-14 UniRef50_D1C449 Cytochrome c oxidase subunit 2 n=1 Tax=Sphaeroba... 82 3e-14 UniRef50_C1A5N6 Cytochrome c oxidase subunit 2 n=1 Tax=Gemmatimo... 82 3e-14 UniRef50_A4A2K3 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopir... 82 4e-14 UniRef50_Q7USM3 Cytochrome-c oxidase chain II/c n=1 Tax=Rhodopir... 81 4e-14 UniRef50_B9KZ00 Cytochrome c oxidase subunit 2 n=1 Tax=Thermomic... 81 4e-14 UniRef50_Q07JU2 Cytochrome c oxidase, subunit II n=6 Tax=Alphapr... 81 6e-14 UniRef50_Q39Z27 Cytochrome c oxidase subunit 2 n=4 Tax=Geobacter... 81 6e-14 UniRef50_B3Q582 Probable cytochrome c oxidase protein, subunit I... 80 6e-14 UniRef50_C1VBF5 Cytochrome c oxidase subunit 2 n=1 Tax=Halogeome... 79 1e-13 UniRef50_A4VKM4 Heme/copper-type cytochrome/quinol oxidase, subu... 79 2e-13 UniRef50_C1SI89 Cytochrome c oxidase subunit 2 n=1 Tax=Denitrovi... 79 2e-13 UniRef50_D0KXM7 Cytochrome c oxidase subunit 2 n=1 Tax=Halothiob... 77 5e-13 UniRef50_UPI0001C30E64 cytochrome c oxidase, subunit II n=1 Tax=... 77 8e-13 UniRef50_A4YDJ5 Cytochrome c oxidase, subunit II n=12 Tax=Sulfol... 77 9e-13 UniRef50_D2R8Q4 Cytochrome c oxidase, subunit II n=1 Tax=Pirellu... 77 1e-12 UniRef50_C1XKJ9 Cytochrome c oxidase subunit 2 n=2 Tax=Meiotherm... 77 1e-12 UniRef50_A0KDK6 Cytochrome c, monohaem n=47 Tax=Burkholderia Rep... 76 1e-12 UniRef50_UPI0001C164F8 cytochrome C oxidase subunit II, transmem... 76 1e-12 UniRef50_UPI0000164D05 cytochrome c oxidase, subunit II n=1 Tax=... 76 1e-12 UniRef50_A6C0L0 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomy... 75 2e-12 UniRef50_D1RCQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Legionell... 74 5e-12 UniRef50_C6B875 Cytochrome c oxidase, subunit II n=4 Tax=Rhizobi... 74 9e-12 UniRef50_Q7NMM6 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobact... 73 1e-11 UniRef50_B0UJY9 Cytochrome c oxidase, subunit II n=6 Tax=Rhizobi... 73 1e-11 UniRef50_A7BSH7 Cytochrome c oxidase aa3, subunit II n=1 Tax=Beg... 73 1e-11 UniRef50_Q2W5A1 Cytochrome c oxidase subunit 2 n=3 Tax=Magnetosp... 73 2e-11 UniRef50_Q01PD2 Cytochrome c oxidase subunit 2 n=1 Tax=Candidatu... 72 2e-11 UniRef50_Q1NHI1 Cytochrome c oxidase, subunit IIc n=1 Tax=Sphing... 72 2e-11 UniRef50_B2JRY1 Cytochrome c oxidase, subunit II n=2 Tax=Burkhol... 72 2e-11 UniRef50_A9LGT2 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomy... 72 2e-11 UniRef50_A7HQK3 Cytochrome c oxidase subunit II n=1 Tax=Parvibac... 72 2e-11 UniRef50_B1ZMS7 Cytochrome c oxidase subunit 2 n=2 Tax=Opitutace... 72 2e-11 UniRef50_Q3A1J0 Cytochrome c oxidase subunit 2 n=2 Tax=Desulfuro... 72 4e-11 UniRef50_A9F508 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium... 71 5e-11 UniRef50_A4WYS2 Cytochrome-c oxidase n=7 Tax=Alphaproteobacteria... 71 6e-11 UniRef50_A5PDP5 Putative cytochrome c oxidase chain II protein n... 70 8e-11 UniRef50_Q11EK7 Cytochrome c oxidase, subunit II n=3 Tax=Rhizobi... 70 1e-10 UniRef50_C5CVJ0 Cytochrome c oxidase, subunit II n=1 Tax=Variovo... 70 1e-10 UniRef50_D0MDE2 Cytochrome c oxidase subunit 2 n=3 Tax=Rhodother... 69 1e-10 UniRef50_A5GCS3 Cytochrome C oxidase subunit II, transmembrane r... 69 2e-10 UniRef50_Q2YBV3 Cytochrome c oxidase, subunit II n=1 Tax=Nitroso... 69 2e-10 UniRef50_Q0BPU5 Cytochrome c oxidase subunit 2 n=1 Tax=Granuliba... 68 4e-10 UniRef50_A8IDL7 Cytochrome c oxidase subunit 2 n=29 Tax=Alphapro... 68 4e-10 UniRef50_C8SJH9 Cytochrome c oxidase, subunit II n=1 Tax=Mesorhi... 68 5e-10 UniRef50_A8LTQ3 Cytochrome c oxidase subunit II n=1 Tax=Dinorose... 67 6e-10 UniRef50_A9WF38 Cytochrome c oxidase subunit 2 n=3 Tax=Chlorofle... 67 8e-10 UniRef50_C7P0B0 Cytochrome c oxidase subunit 2 n=3 Tax=Halobacte... 67 9e-10 UniRef50_Q2JUD7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechoco... 67 1e-09 UniRef50_B1M0S7 Cytochrome c oxidase, subunit II n=1 Tax=Methylo... 66 1e-09 UniRef50_Q01R98 Cytochrome c oxidase, subunit II n=1 Tax=Candida... 66 1e-09 UniRef50_Q5V3P5 Cytochrome c oxidase subunit 2 n=1 Tax=Haloarcul... 66 1e-09 UniRef50_D2X915 Cytochrome c oxidase subunit II n=1 Tax=Sorangiu... 66 2e-09 UniRef50_Q6KZG1 Cytochrome c oxidase polypeptide II n=1 Tax=Picr... 66 2e-09 UniRef50_Q1J1C4 Cytochrome c oxidase subunit 2 n=2 Tax=Deinococc... 65 2e-09 UniRef50_B0C0A3 Cytochrome c oxidase subunit 2 n=1 Tax=Acaryochl... 65 2e-09 UniRef50_D1YAK0 Cytochrome c oxidase subunit 2 n=3 Tax=Propionib... 65 3e-09 UniRef50_Q7NIL9 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobact... 65 4e-09 UniRef50_Q1H1C0 Cytochrome c oxidase subunit 2 n=1 Tax=Methyloba... 64 5e-09 UniRef50_A8TIJ6 Cytochrome c oxidase subunit 2 n=1 Tax=alpha pro... 64 5e-09 UniRef50_B2J6R2 Cytochrome c oxidase subunit 2 n=6 Tax=Nostocace... 64 5e-09 UniRef50_Q46SU8 Cytochrome c oxidase, subunit II:Cytochrome c, c... 64 6e-09 UniRef50_D1CCH9 Cytochrome c oxidase, subunit II n=1 Tax=Thermob... 64 6e-09 UniRef50_C5CCB5 Cytochrome c oxidase subunit 2 n=1 Tax=Micrococc... 64 7e-09 UniRef50_B4RAU6 Cytochrome c oxidase, subunit II n=1 Tax=Phenylo... 64 7e-09 UniRef50_A5G0I4 Cytochrome c oxidase subunit 2 n=1 Tax=Acidiphil... 64 1e-08 UniRef50_C6B8H8 Cytochrome c oxidase, subunit II n=1 Tax=Rhizobi... 63 1e-08 UniRef50_Q06474 Cytochrome c oxidase subunit 2 n=48 Tax=root Rep... 63 1e-08 UniRef50_C6XZ37 Cytochrome c oxidase subunit 2 n=2 Tax=Pedobacte... 63 1e-08 UniRef50_C1ZF25 Cytochrome c oxidase, subunit II n=1 Tax=Plancto... 63 1e-08 UniRef50_A6GFM7 Cytochrome c oxidase subunit 2 n=1 Tax=Plesiocys... 63 2e-08 UniRef50_Q93TC7 Cytochrome c oxidase subunit II (Fragment) n=1 T... 62 2e-08 UniRef50_A7H8L3 Cytochrome c oxidase subunit II n=7 Tax=Cystobac... 62 2e-08 UniRef50_A4WT84 Cytochrome c, monohaem n=9 Tax=Rhodobacteraceae ... 62 3e-08 UniRef50_D1ATW6 Cytochrome c oxidase subunit 2 n=9 Tax=Anaplasma... 62 3e-08 UniRef50_A9IUK7 Cytochrome-c oxidase chain II/c n=2 Tax=Betaprot... 62 3e-08 UniRef50_B0RXK0 Cytochrome c oxidase subunit 2 n=13 Tax=Gammapro... 62 3e-08 UniRef50_Q04PG8 Cytochrome c oxidase subunit 2 n=7 Tax=Bacteria ... 61 4e-08 UniRef50_B7KCJ0 Cytochrome c oxidase subunit 2 n=12 Tax=Cyanobac... 61 4e-08 UniRef50_B6IRX5 Cytochrome c oxidase subunit 2 n=1 Tax=Rhodospir... 61 5e-08 UniRef50_Q3JAA7 Cytochrome c oxidase, subunit II n=3 Tax=Bacteri... 61 6e-08 UniRef50_B0R3W3 Cytochrome c oxidase subunit 2 n=2 Tax=Halobacte... 61 6e-08 UniRef50_Q6PYD1 Cytochrome c oxidase subunit II (Fragment) n=1 T... 60 7e-08 UniRef50_A9B5D1 Cytochrome c oxidase subunit 2 n=1 Tax=Herpetosi... 60 9e-08 UniRef50_D2RUF7 Cytochrome c oxidase, subunit II n=2 Tax=Halobac... 60 1e-07 UniRef50_Q3J6Q8 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosoco... 60 1e-07 UniRef50_C1DG42 Cytochrome c oxidase subunit 2 n=5 Tax=Gammaprot... 59 2e-07 UniRef50_Q9B8D8 Cytochrome c oxidase subunit 2 n=150 Tax=Eukaryo... 59 2e-07 UniRef50_Q0ABY9 Cytochrome c oxidase subunit 2 n=1 Tax=Alkalilim... 59 2e-07 UniRef50_Q089E4 Cytochrome c oxidase subunit 2 n=102 Tax=cellula... 59 2e-07 UniRef50_A9F8S3 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium... 59 2e-07 UniRef50_Q72B26 Cytochrome c oxidase subunit 2 n=6 Tax=Desulfovi... 59 3e-07 UniRef50_P24011 Cytochrome c oxidase subunit 2 n=13 Tax=Bacillal... 59 3e-07 UniRef50_B8HMH5 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanothec... 59 3e-07 UniRef50_B4DA33 Cytochrome c oxidase subunit 2 n=1 Tax=Chthoniob... 59 3e-07 UniRef50_A3Z005 Cytochrome c oxidase subunit 2 n=1 Tax=Synechoco... 58 3e-07 UniRef50_Q5V019 Cytochrome c oxidase subunit 2 n=2 Tax=Halobacte... 58 4e-07 UniRef50_A9VZ92 Cytochrome c oxidase, subunit II n=9 Tax=Alphapr... 58 4e-07 UniRef50_D2QS53 Cytochrome c oxidase subunit II n=1 Tax=Spirosom... 58 4e-07 UniRef50_C7NIK2 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococc... 58 6e-07 UniRef50_C1F1C9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidobact... 57 7e-07 UniRef50_Q0AMG7 Cytochrome c oxidase subunit 2 n=2 Tax=Hyphomona... 57 7e-07 UniRef50_A3ZTG0 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopir... 57 1e-06 UniRef50_Q1RI44 Probable cytochrome c oxidase subunit 2 n=19 Tax... 56 1e-06 UniRef50_Q1V0P2 Cytochrome c oxidase subunit 2 n=2 Tax=Candidatu... 56 1e-06 UniRef50_B3CN60 Cytochrome c oxidase subunit 2 n=7 Tax=Wolbachia... 56 2e-06 UniRef50_C5CLF6 Cytochrome c oxidase, subunit II n=5 Tax=Burkhol... 56 2e-06 UniRef50_Q02BQ9 Cytochrome c oxidase subunit 2 n=3 Tax=Bacteria ... 55 2e-06 UniRef50_B1Y7T1 Cytochrome c oxidase subunit 2 n=3 Tax=Proteobac... 55 3e-06 UniRef50_B5INR0 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanobium... 55 3e-06 UniRef50_Q3M753 Cytochrome c oxidase subunit 2 n=6 Tax=Nostocace... 55 4e-06 UniRef50_A9BE64 Cytochrome c oxidase subunit 2 n=25 Tax=cellular... 55 4e-06 UniRef50_B5EQY9 Cytochrome c oxidase subunit II n=4 Tax=Acidithi... 55 4e-06 UniRef50_D2PZ51 Cytochrome c oxidase, subunit II n=1 Tax=Kribbel... 55 5e-06 UniRef50_B8ES67 Cytochrome c oxidase, subunit II n=1 Tax=Methylo... 54 5e-06 UniRef50_UPI00003C85B5 cytochrome c oxidase polypeptide II n=1 T... 54 6e-06 UniRef50_Q1YUZ5 Cytochrome c oxidase subunit 2 n=1 Tax=gamma pro... 54 6e-06 UniRef50_Q3JBQ1 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosoco... 54 6e-06 UniRef50_D0LN58 Cytochrome c oxidase, subunit II n=1 Tax=Haliang... 54 6e-06 UniRef50_Q31JY7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechoco... 54 7e-06 UniRef50_B8IHG8 Cytochrome c oxidase, subunit II n=2 Tax=Rhizobi... 54 7e-06 UniRef50_B4WI06 Cytochrome c oxidase subunit 2 n=1 Tax=Synechoco... 54 7e-06 UniRef50_B9KJJ8 Cytochrome c, monoheme n=5 Tax=Alphaproteobacter... 54 8e-06 UniRef50_Q9YDX7 Heme-copper oxidase subunit 2 n=1 Tax=Aeropyrum ... 54 8e-06 UniRef50_UPI0000510271 cytochrome C oxidase subunit II n=1 Tax=B... 54 9e-06 UniRef50_A4A0M8 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopir... 54 1e-05 UniRef50_Q0VNA0 Cytochrome c oxidase subunit 2 n=2 Tax=Alcanivor... 53 1e-05 UniRef50_D2UBE6 Putative cytochrome c oxidase, subunit II protei... 53 2e-05 UniRef50_B2ZFN0 CoxB n=1 Tax=Thiobacillus prosperus RepID=B2ZFN0... 53 2e-05 UniRef50_A7HEB6 Cytochrome c oxidase subunit 2 n=1 Tax=Anaeromyx... 52 2e-05 UniRef50_Q2YCN0 Cytochrome c oxidase subunit 2 n=4 Tax=Betaprote... 52 2e-05 UniRef50_A8UU91 Cytochrome c oxidase subunit 2 n=3 Tax=Aquificac... 52 3e-05 UniRef50_B8EPK1 Cytochrome c oxidase subunit 2 n=1 Tax=Methyloce... 52 3e-05 UniRef50_A5FJE3 Cytochrome c oxidase subunit 2 n=3 Tax=Flavobact... 52 4e-05 UniRef50_D0LJA9 Cytochrome c oxidase subunit 2 n=1 Tax=Haliangiu... 51 5e-05 UniRef50_Q3IRC8 Cytochrome c oxidase subunit 2 n=2 Tax=Halobacte... 51 5e-05 UniRef50_Q2NCF4 Cytochrome c oxidase subunit 2 n=6 Tax=Sphingomo... 51 5e-05 UniRef50_A5GVD1 Cytochrome c oxidase subunit 2 n=11 Tax=Cyanobac... 51 6e-05 UniRef50_B8GPT4 Cytochrome c oxidase subunit 2 n=1 Tax=Thioalkal... 51 6e-05 UniRef50_A9WMK9 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococc... 51 6e-05 UniRef50_C6VT36 Cytochrome c oxidase subunit 2 n=1 Tax=Dyadobact... 50 7e-05 UniRef50_P98054 Cytochrome c oxidase subunit 2 n=4 Tax=Cyanobact... 50 8e-05 UniRef50_B8H5D8 Cytochrome c oxidase subunit 2 n=6 Tax=Caulobact... 50 8e-05 UniRef50_B6IXF5 Cytochrome c oxidase subunit 2 n=6 Tax=Alphaprot... 50 1e-04 UniRef50_B2JCA5 Cytochrome c oxidase subunit 2 n=109 Tax=Proteob... 50 1e-04 UniRef50_O78682 Cytochrome c oxidase subunit 2 n=572 Tax=cellula... 50 1e-04 UniRef50_Q47R64 Cytochrome c oxidase subunit 2 n=4 Tax=Streptosp... 49 2e-04 UniRef50_A0LTG9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidother... 49 3e-04 UniRef50_Q766X1 Cytochrome c oxidase subunit 2 n=30 Tax=Coelomat... 49 3e-04 UniRef50_C7I249 Cytochrome c oxidase subunit 2 n=1 Tax=Thiomonas... 48 4e-04 UniRef50_B3RBU3 Cytochrome c oxidase subunit 2 n=28 Tax=Proteoba... 48 5e-04 UniRef50_C1XPU9 Cytochrome c oxidase subunit 2 n=1 Tax=Meiotherm... 47 6e-04 UniRef50_A3MXJ3 Cytochrome c oxidase subunit 2 n=3 Tax=Pyrobacul... 47 8e-04 UniRef50_A1ZL76 Cytochrome c oxidase subunit 2 n=1 Tax=Microscil... 47 8e-04 UniRef50_A3IST1 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanothec... 47 0.001 UniRef50_C7M190 Cytochrome c oxidase subunit II n=1 Tax=Acidimic... 47 0.001 UniRef50_Q114N6 Cytochrome c oxidase subunit 2 n=9 Tax=Cyanobact... 47 0.001 UniRef50_C6QIT1 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomicr... 47 0.001 UniRef50_Q47G11 Cytochrome c oxidase subunit 2 n=2 Tax=Betaprote... 46 0.001 UniRef50_Q83GL9 Cytochrome c oxidase subunit 2 n=2 Tax=Tropherym... 46 0.001 UniRef50_A6CA06 Cytochrome c oxidase subunit 2 n=1 Tax=Planctomy... 46 0.002 UniRef50_Q1YMW9 Putative cytochrome oxidase subunit II n=1 Tax=A... 46 0.002 UniRef50_A5FT26 Putative uncharacterized protein n=1 Tax=Acidiph... 46 0.002 UniRef50_Q9B8A2 Cytochrome c oxidase subunit 2 n=2 Tax=Nematoda ... 46 0.002 UniRef50_A4FAC2 Cytochrome c oxidase subunit 2 n=1 Tax=Saccharop... 45 0.002 UniRef50_C7QBL1 Cytochrome c oxidase subunit 2 n=1 Tax=Catenulis... 45 0.003 UniRef50_A3VPG7 Cytochrome c oxidase subunit 2 n=1 Tax=Parvularc... 45 0.003 UniRef50_A1Z3B2 Cytochrome c oxidase subunit 2 n=1 Tax=Romanomer... 45 0.004 UniRef50_P00403 Cytochrome c oxidase subunit 2 n=2315 Tax=Fungi/... 45 0.004 UniRef50_Q2J8B8 Cytochrome c oxidase subunit 2 n=4 Tax=Frankia R... 45 0.004 UniRef50_A5VD54 Cytochrome c oxidase subunit 2 n=3 Tax=Alphaprot... 45 0.005 >UniRef50_P0ABJ2 Ubiquinol oxidase subunit 2 n=150 Tax=Proteobacteria RepID=CYOA_ECOL6 Length = 315 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/315 (100%), Positives = 315/315 (100%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL Sbjct: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL Sbjct: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG Sbjct: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ Sbjct: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH Sbjct: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 Query: 301 EGMEGMDMSHAESAH 315 EGMEGMDMSHAESAH Sbjct: 301 EGMEGMDMSHAESAH 315 >UniRef50_Q9I427 Ubiquinol oxidase subunit 2 n=143 Tax=Proteobacteria RepID=CYOA_PSEAE Length = 331 Score = 359 bits (921), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 225/301 (74%), Gaps = 4/301 (1%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWK 68 +L WLSL A +LL GC+ L +PKGQ+G+++R+LI+TA LMLIVVIP I+M + FAWK Sbjct: 9 ALKWLSL-APALLLGGCDMTLFNPKGQVGMDERTLIITATLLMLIVVIPVIVMTLAFAWK 67 Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 YRASN A+Y P+W HSN++EAVVW VP +II L +TW++TH L+P +PL + KP+T Sbjct: 68 YRASNTQAEYKPDWHHSNRIEAVVWLVPCVIIAILGWITWESTHKLDPYRPLDSEVKPVT 127 Query: 129 IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 I+ VS+DWKW FIYPEQGIATVNEIAFP +TPV F++TS+SVMNSFFIP+LGSQIY+MAG Sbjct: 128 IQAVSLDWKWLFIYPEQGIATVNEIAFPKDTPVNFQITSDSVMNSFFIPQLGSQIYSMAG 187 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM 248 M T+LHLIANE G +DGISA+YSG GFSGM+FKAIAT ++ F WVAK K +P ++S + Sbjct: 188 MMTKLHLIANEEGVFDGISANYSGGGFSGMRFKAIATSEQ-GFQDWVAKVKAAPASLS-I 245 Query: 249 AAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHE-GMEGMD 307 + +L PSE YFS+V P+LF ++ K+ HG + E + HE M G D Sbjct: 246 GTYPELVKPSENVPPTYFSSVSPELFGHILTKYEHHGDAKGAAHGEHAGAEHEAAMTGHD 305 Query: 308 M 308 M Sbjct: 306 M 306 >UniRef50_Q2SXM9 Ubiquinol oxidase, subunit II n=79 Tax=cellular organisms RepID=Q2SXM9_BURTA Length = 377 Score = 334 bits (857), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 160/281 (56%), Positives = 211/281 (75%), Gaps = 7/281 (2%) Query: 13 LSLFAGTVLLSGCNSA-LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA 71 L L AG LSGC+ +LDPKG IG ++SLI T+ MLIVV+P I + + FAW+YRA Sbjct: 96 LGLVAG---LSGCSELHVLDPKGAIGAAEKSLIATSTWAMLIVVVPVIFLTLLFAWRYRA 152 Query: 72 SNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 SN++A Y+P W+HS +E V+WTVP LII+FL +LTWKTTHAL+P +P+ KPI +EV Sbjct: 153 SNRNATYAPKWAHSTAIEIVIWTVPSLIILFLGILTWKTTHALDPYRPIESSVKPIDVEV 212 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 V++DWKW F+YPE GIA+VN++A P TP+ F++TS+SVMNSFFIP+LG+Q+YAMAGMQT Sbjct: 213 VALDWKWLFVYPELGIASVNQLAVPVGTPINFRITSDSVMNSFFIPQLGTQVYAMAGMQT 272 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 RLHLIA+EPG + GISA+YSG GFS MKF+ +AT R AFD WVAK + S + + DM A+ Sbjct: 273 RLHLIADEPGDFAGISANYSGRGFSDMKFRTLAT-SRDAFDAWVAKVRASADRL-DMTAY 330 Query: 252 EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ 292 +LA PSE V Y+S V LF ++I K+ +G +D+T Sbjct: 331 SQLAQPSEKQPVRYYSTVDSRLFHNIIAKY-NNGHVLDLTD 370 >UniRef50_C6BF43 Ubiquinol oxidase, subunit II n=10 Tax=Proteobacteria RepID=C6BF43_RALP1 Length = 340 Score = 329 bits (843), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 155/284 (54%), Positives = 209/284 (73%), Gaps = 7/284 (2%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 GCN +LDPKG I E+++LIL A GLML+VVIP I++ + FAWKYRASN A+Y P+WS Sbjct: 35 GCNLTVLDPKGMIAAEEKTLILVATGLMLLVVIPVIVLTLVFAWKYRASNTKARYEPDWS 94 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 HSN +EAVVW +P LIII L V+T+K+THAL+P KP+ D KPIT+E VS+DWKW FIYP Sbjct: 95 HSNAIEAVVWLIPCLIIIVLGVITYKSTHALDPYKPIESDVKPITVEAVSLDWKWLFIYP 154 Query: 144 EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 E IATVN++AFPANTP+ FK+TS++VMN+FFIP+LGSQ+YAMAGMQT+LHLIANE G + Sbjct: 155 ELKIATVNQLAFPANTPINFKITSDTVMNAFFIPQLGSQVYAMAGMQTKLHLIANETGVF 214 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQV 263 DG+S++YSG GF+GMKFKA A + FD WV + + S ++ + +L+ PSE Sbjct: 215 DGMSSNYSGSGFTGMKFKATAMTNE-EFDAWVKQVRASSQNLTK-EGYAELSKPSEKVPP 272 Query: 264 EYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMD 307 +++V P L+ +++K+M M + E + E +EG + Sbjct: 273 AAYASVDPMLYHSILHKYMDK-----MGEGEKVLTLDEALEGAN 311 >UniRef50_A9IQC4 Ubiquinol oxidase polypeptide II n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IQC4_BORPD Length = 345 Score = 320 bits (821), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 152/284 (53%), Positives = 206/284 (72%), Gaps = 6/284 (2%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 + ++LG +LL GC +L PKG IG ++++LILTA GLML++V+P I+M + F Sbjct: 52 FGRTLG----IGALMLLGGCTMEVLSPKGDIGAQEKTLILTALGLMLLIVVPVIIMTLYF 107 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 AWKYRASN A Y P WSHS ++E VVWT+P +I+ LAVLTW+++H L+P +P+ K Sbjct: 108 AWKYRASNTQAVYMPRWSHSTRIEVVVWTIPCIIVGILAVLTWRSSHELDPYRPIESAVK 167 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 P+ I+VVSMDWKW FIYP+ GIATVNEIAFP + PV F++TS SVMNSFFIP+LGSQIY+ Sbjct: 168 PVNIDVVSMDWKWLFIYPDYGIATVNEIAFPVDAPVQFRITSASVMNSFFIPQLGSQIYS 227 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 MAGM+T+LHLIA EPGTY GISA+YSG GFSGM+F AIAT + F+ W+ +AK + N + Sbjct: 228 MAGMETKLHLIAREPGTYAGISANYSGGGFSGMRFNAIAT-SQQGFEDWINQAKAANNPL 286 Query: 246 SDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 + AA++ LAAPS +S+ +F +++ M+ +D Sbjct: 287 TP-AAYQALAAPSINVAATRYSSTPTGMFDYIMHNQMSKIAGLD 329 >UniRef50_C3K1U7 Cytochrome C oxidase (Ubiquinol oxidase) subunit II n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K1U7_PSEFS Length = 331 Score = 320 bits (819), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 166/302 (54%), Positives = 217/302 (71%), Gaps = 2/302 (0%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M +Y + LG+L L ++L GC L+DPKGQIGL+QR+LI+TA LML+VV+P I+ Sbjct: 19 MSKNRYPRLLGFLPLLGMMLMLGGCKWTLMDPKGQIGLDQRNLIITATLLMLLVVVPVII 78 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 M FAWKYRASN +A Y+P WSHS K+E VW VPILIII L +T+K+TH L+P +PL Sbjct: 79 MTFAFAWKYRASNTNATYAPKWSHSTKIEIAVWLVPILIIIALGYITYKSTHELDPYRPL 138 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 D KPI IEVV++DWKW FIYP+ GIATVN+I FP NTP+ F++TS++VMNSFFIP LG Sbjct: 139 ESDVKPINIEVVALDWKWLFIYPDLGIATVNQIRFPENTPLNFRITSDAVMNSFFIPALG 198 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 QIYAMAGMQTRLHLIANE +GISA+YSG GF+GMKFKAI+T + F+ WVA+ K Sbjct: 199 GQIYAMAGMQTRLHLIANEKAEMEGISANYSGAGFTGMKFKAIST-SQEDFNAWVAEVKA 257 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 +P + D A ++ L PS+ N V +S +P+LF +++K+ + + E +A Sbjct: 258 APKQL-DQAEYDALTKPSQNNPVALYSTYEPNLFQKIVDKYEGMKPGKPVKHEKKEVAAV 316 Query: 301 EG 302 EG Sbjct: 317 EG 318 >UniRef50_B4SM49 Ubiquinol oxidase, subunit II n=4 Tax=Proteobacteria RepID=B4SM49_STRM5 Length = 301 Score = 314 bits (804), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 150/276 (54%), Positives = 204/276 (73%), Gaps = 3/276 (1%) Query: 13 LSLFA-GTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA 71 L+L A + L+GC+ LLD KG +G+ QR LIL GLMLIVV+PAI++ FAW+YRA Sbjct: 10 LALVALACIALTGCDWVLLDSKGMVGIAQRDLILICIGLMLIVVVPAIVLTFVFAWRYRA 69 Query: 72 SNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 N AKY P+WSHS KVE VVW VP++II LAV+ W +TH L+P KPL +P+ ++V Sbjct: 70 GNTKAKYMPDWSHSTKVEIVVWGVPLIIIAVLAVIVWTSTHELDPYKPLDVAGEPLHVDV 129 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 ++ DWKW F+YP+ GIATVN++ FPAN + F +TSNS MN+FFIP+LG QIYAMAGM+T Sbjct: 130 IATDWKWVFVYPDLGIATVNQLNFPANRALAFNITSNSTMNTFFIPQLGGQIYAMAGMRT 189 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 +LHLIANEPG + G+S +YSG GFS MKF A A+ + F++WVA+ + +P+ +S A F Sbjct: 190 QLHLIANEPGQFRGMSGNYSGHGFSNMKFIATASSNE-DFERWVAEVRSAPDALS-FAEF 247 Query: 252 EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKS 287 + LAAPS V++FS+V+P LF VI++F+ G++ Sbjct: 248 KALAAPSRNAPVQHFSSVEPLLFKKVIDQFIGVGEN 283 >UniRef50_Q2C912 Cytochrome o ubiquinol oxidase, subunit II n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C912_9GAMM Length = 279 Score = 313 bits (801), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 158/271 (58%), Positives = 202/271 (74%), Gaps = 3/271 (1%) Query: 19 TVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY 78 T++L+GC ALLDPKG IG++++ LI+ A LMLIVVIP ILM + FA++YR SN D +Y Sbjct: 5 TLILNGCQFALLDPKGSIGVQEKELIIKALLLMLIVVIPVILMTIYFAYRYRESNTDEEY 64 Query: 79 SPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKW 138 +P+WSHS K+E VVWT+PI+II LA +TW++TH LEPSKP+A D KPITIEVVS+DWKW Sbjct: 65 APDWSHSTKIEVVVWTIPIIIIAILATITWRSTHELEPSKPIASDAKPITIEVVSLDWKW 124 Query: 139 FFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIAN 198 FIYPEQ IATVN + FP N PV FK+TS+++MN+FFIP+LGSQIYAM GM T+L+LIAN Sbjct: 125 LFIYPEQDIATVNYVVFPKNVPVQFKLTSDNIMNAFFIPQLGSQIYAMPGMVTKLNLIAN 184 Query: 199 EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPS 258 G + G +SYSG GFS MKF A + +R AF WV + K SPN + D F +A+PS Sbjct: 185 HRGDFKGFGSSYSGKGFSEMKFTATSLENRHAFSSWVQQVKMSPNRIEDWEQFRAIASPS 244 Query: 259 EYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 + E FS+V P LF DV+ + H SM+ Sbjct: 245 VGDPAESFSSVPPFLFNDVVTQ---HPGSMN 272 >UniRef50_C0RGA6 Ubiquinol oxidase, subunit II n=37 Tax=Proteobacteria RepID=C0RGA6_BRUMB Length = 342 Score = 311 bits (796), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 147/272 (54%), Positives = 195/272 (71%), Gaps = 5/272 (1%) Query: 13 LSLFAGTVLLSGC-NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA 71 ++ A + L+GC N LLDPKGQ+GLE+R LIL A G+ML+VV+P IL + FAWKYRA Sbjct: 12 FAVLALSAFLAGCQNQVLLDPKGQVGLEERDLILFATGIMLLVVVPVILATLFFAWKYRA 71 Query: 72 SNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 +N+ A Y P+W HS K+E VW +P+ II+ L +TW +TH L+P +PL + KPI +EV Sbjct: 72 TNEKADYQPDWHHSTKIELAVWLIPMAIIVVLGTVTWISTHKLDPYRPLESNVKPINVEV 131 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 V++DWKW FIYP+QGIATVNE+A P N PV FK+TS+++MNSFFIP+LGSQ+Y M MQT Sbjct: 132 VALDWKWLFIYPDQGIATVNEMAMPVNVPVNFKLTSSNLMNSFFIPQLGSQVYTMPSMQT 191 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS---DM 248 +LHLIAN+ G + GISA+YSG GF+ M+FKA A D+A FD+WVA K D Sbjct: 192 KLHLIANQEGDFAGISANYSGQGFAQMRFKAHAF-DQAGFDKWVADVKAQAAAKGEDLDR 250 Query: 249 AAFEKLAAPSEYNQVEYFSNVKPDLFADVINK 280 A + L PSE + V+YF+ LF D++N+ Sbjct: 251 ARYASLVQPSEKHAVQYFNYGDKALFHDIVNR 282 >UniRef50_Q8K993 Ubiquinol oxidase subunit 2 n=6 Tax=Gammaproteobacteria RepID=CYOA_BUCAP Length = 290 Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 142/281 (50%), Positives = 195/281 (69%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 +N L L L GC+S L +P G I +++ S++L +F +ML V+IP I M + F Sbjct: 6 FNNFFKTLLLILIAFTLHGCDSILFNPHGIIAIQECSILLISFLIMLFVIIPVIFMTIYF 65 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 + KYRASN +AKY P+W S K+E +VWT+PI II+FLA +TW +H L+P K + K Sbjct: 66 SVKYRASNINAKYKPDWCDSKKIEIIVWTIPISIILFLAFVTWNYSHILDPKKSIISKYK 125 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 PI I+VVS+DW+W FIYPE IAT+NEI FP N + F +TSNSVMNSFFIP LGSQIYA Sbjct: 126 PIKIDVVSLDWRWLFIYPEYHIATINEIMFPINRSIIFHITSNSVMNSFFIPSLGSQIYA 185 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 M GM T L+L++N PG Y GIS++YSG GFS MKF AI+ + F+ W+ KA+QSP + Sbjct: 186 MPGMMTTLNLMSNSPGKYKGISSNYSGKGFSNMKFTAISVLNIKDFENWIKKAQQSPKKL 245 Query: 246 SDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGK 286 + M+ F ++ P+E + +EYFS+VK +LF ++IN+ + K Sbjct: 246 NKMSIFNIISLPNENHFIEYFSDVKKNLFYEIINQTYSKNK 286 >UniRef50_Q4K7G6 Cytochrome o ubiquinol oxidase, subunit II n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K7G6_PSEF5 Length = 303 Score = 303 bits (777), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 138/281 (49%), Positives = 206/281 (73%), Gaps = 4/281 (1%) Query: 8 KSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 +++ + L A LLS CN + +PKGQI ++R+LI+ A GLML+VVIP I++ FAW Sbjct: 2 QTINKILLVAACGLLSACNLIVFNPKGQIATDERNLIILATGLMLLVVIPVIVLMFVFAW 61 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 +YR+++K A+YSP W+ S+++EAVVW VP++II+ L ++TW+TTH+L+P KP+A D P+ Sbjct: 62 RYRSTSKRARYSPGWASSHRIEAVVWGVPLVIIVILGIVTWRTTHSLDPYKPIASDNPPL 121 Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 ++VV+ DWKW FIYP+ GIA+VNE+A P +TPV F +TS++ M SFFIP LG QIYAMA Sbjct: 122 NVQVVATDWKWLFIYPDLGIASVNELALPVHTPVSFTITSDAAMTSFFIPALGGQIYAMA 181 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQWVAKAKQSPNTMS 246 GMQTRLHLIANE G + GI+A+Y+GPGFS M F + TP A F+ WV + +Q P + Sbjct: 182 GMQTRLHLIANETGQFRGIAANYNGPGFSDMHFTTQSQTP--AQFEAWVQRVRQGPLRL- 238 Query: 247 DMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKS 287 D ++ L+ P+ + ++++++V+P LF +++K+ K+ Sbjct: 239 DQQSYAVLSRPTLGHPIQHYASVEPGLFQVIVDKYEGMNKA 279 >UniRef50_Q2C3Z7 Cytochrome O ubiquinol oxidase subunit II n=3 Tax=Vibrionaceae RepID=Q2C3Z7_9GAMM Length = 295 Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 148/276 (53%), Positives = 196/276 (71%), Gaps = 7/276 (2%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 L LS+ T + + N L D KG IG Q SLI+T+ LM I+++P +LM+V F +KY Sbjct: 14 LATLSVALLTFIFTSSNMVLFDSKGSIGQAQSSLIITSVLLMAIIIVPVLLMSVYFPYKY 73 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R SNKDA+Y PNW HS K+E +VW VP LII+ L +T++T+++L+P K +A +EKP+TI Sbjct: 74 RHSNKDAEYKPNWEHSTKIEVIVWAVPCLIILALGWITYQTSYSLDPRKEIASEEKPLTI 133 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 +VV+M+WKW FIYPEQ IATVNEIA P N PV F VTS++ MNSFFIP+LGSQ+YAMAGM Sbjct: 134 QVVAMNWKWLFIYPEQQIATVNEIALPVNRPVRFLVTSDTTMNSFFIPQLGSQVYAMAGM 193 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 + RLHL+A E G Y GISA+YSG GF+ MKFKA A D A F+QWV K K S ++D + Sbjct: 194 ENRLHLMAEEKGVYRGISANYSGFGFTNMKFKAHAV-DNADFEQWVQKVKASDKVLND-S 251 Query: 250 AFEKLAAPSEY-----NQVEYFSNVKPDLFADVINK 280 ++ L A ++ + V YF++V P F D+I K Sbjct: 252 SYAVLTANAKEQIKTAHPVTYFASVDPLRFKDIIEK 287 >UniRef50_P57544 Ubiquinol oxidase subunit 2 n=4 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=CYOA_BUCAI Length = 296 Score = 297 bits (761), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 140/289 (48%), Positives = 192/289 (66%), Gaps = 6/289 (2%) Query: 13 LSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 LSL L+GCN+ LL+ G I E+ SLIL +F +ML ++IP I M + F+ KYR++ Sbjct: 4 LSLILIFFFLNGCNNPLLNSHGTIATEEYSLILISFIMMLFIIIPVIFMTIYFSLKYRST 63 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVV 132 N + Y PNW S K+E VVWT+PI+I+ FLA L+W TH L+P K + PI I+ V Sbjct: 64 NVNQIYKPNWCDSKKIEIVVWTIPIIIVSFLAFLSWSYTHKLDPKKSIVSLNNPIKIDAV 123 Query: 133 SMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTR 192 ++DWKW FIYP+ IAT+NEI FP N P+ F++TSNSVMN+FFIP LGSQIYAM GM T+ Sbjct: 124 ALDWKWLFIYPDYNIATINEIMFPVNRPIVFRITSNSVMNAFFIPSLGSQIYAMPGMTTK 183 Query: 193 LHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE 252 L+LIAN+ G Y GIS++YSG GFS MKF AI+ + F WV K + S ++ M F+ Sbjct: 184 LNLIANDVGKYKGISSNYSGHGFSNMKFTAISVLKNSTFLDWVKKVQASSIKLNTMKTFD 243 Query: 253 KLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHE 301 ++ P+E +EYFS+VK +LF + N++ +D E+ +HE Sbjct: 244 IISIPNENYSIEYFSSVKKNLFNKIKNQYSIKHFILD------ENLSHE 286 >UniRef50_Q0KB46 Bo3-type quinol oxidase, subunit II n=2 Tax=Burkholderiaceae RepID=Q0KB46_RALEH Length = 330 Score = 297 bits (760), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 135/272 (49%), Positives = 191/272 (70%), Gaps = 3/272 (1%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 GCN LL+PKG IG +++SLIL + +ML+VVIP I++ + FAW+YR +N A Y+P W+ Sbjct: 43 GCNLELLNPKGSIGEQEKSLILISLFVMLMVVIPVIVLTLWFAWRYRETNTSATYAPKWA 102 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 HS ++E VVW +P +I+ LAVL W +TH L+P +PL KP+ ++V++++WKW FIYP Sbjct: 103 HSTRIEVVVWGIPCVIVACLAVLIWDSTHKLDPYRPLESQVKPVQVDVIALNWKWLFIYP 162 Query: 144 EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 E G+A++N++A P TPV F++T+ S+MNSFFIP+LGS +YAMAGMQTRLHLIA+ PG Y Sbjct: 163 EYGVASLNQLAIPVGTPVNFRLTAESMMNSFFIPQLGSMVYAMAGMQTRLHLIADTPGVY 222 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQV 263 G SA+YSGPGFS M FK +AT R FD W+ A+ S + D+ + L PS + V Sbjct: 223 LGQSAAYSGPGFSDMHFKTLAT-SRKEFDAWIQAARASSQAL-DLKTYRTLELPSSKDPV 280 Query: 264 EYFSNVKPDLFADVINKFM-AHGKSMDMTQPE 294 ++ V P LF V++K+M +G+ PE Sbjct: 281 TLYAAVAPKLFDQVVDKYMLENGQICRADTPE 312 >UniRef50_B3QMY7 Ubiquinol oxidase, subunit II n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QMY7_CHLP8 Length = 302 Score = 296 bits (758), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 149/295 (50%), Positives = 205/295 (69%), Gaps = 11/295 (3%) Query: 13 LSLFAGTVLLSGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA 71 SLF + +L+GCN + PKG + ++ LI TAFGLMLIVVIP ++MA+GFA +YRA Sbjct: 13 FSLFFTSFILTGCNKMVVFQPKGPVARDEALLIYTAFGLMLIVVIPVLVMAIGFAIRYRA 72 Query: 72 SNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 SN A Y PNW++S KVE +VW VP++I+ FL+ LTW T L+P KP+A + KP+ +EV Sbjct: 73 SNDKATYKPNWANSIKVELIVWLVPVIIVAFLSWLTWTGTFRLDPYKPIAAEAKPLRVEV 132 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 VS+DW W FIYP+ IATVNE+ PA+TP+ F++TS +VM SF++P+LGSQ+YAMAGMQT Sbjct: 133 VSLDWNWLFIYPDYNIATVNELVLPAHTPLNFRLTSATVMTSFYVPQLGSQMYAMAGMQT 192 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQWVAKAKQSPNTMSDMAA 250 +LHL+A+E GT+DG + +SG G++ M FK I TP+ F WV A+Q+ N +S MA Sbjct: 193 QLHLLADETGTFDGHNREFSGKGYATMHFKTIVKTPEE--FQVWVQNARQTANALS-MAE 249 Query: 251 FEKLAAPSEYNQVEYFSNVKPDLFADVINKFM----AHGKSMDMTQPEGEHSAHE 301 ++ LA P+ + V +S V P LF ++ +F A G MTQP G+ AHE Sbjct: 250 YKALAEPNSNHPVTVYSPVVPGLFDHIVGQFTGWMGADGAMKSMTQPNGK--AHE 302 >UniRef50_C5SNE1 Ubiquinol oxidase, subunit II n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SNE1_9CAUL Length = 341 Score = 292 bits (747), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 147/270 (54%), Positives = 189/270 (70%), Gaps = 7/270 (2%) Query: 15 LFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNK 74 + V LSGC+ AL+DPKG +GL Q+ LI+ A LMLI V+P I+M + FAW+YRASN Sbjct: 21 MVTAAVSLSGCDWALMDPKGPVGLAQKDLIILATLLMLIPVVPVIVMTLWFAWRYRASNT 80 Query: 75 DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL--AHDE---KPITI 129 A Y PN+ HSN++EAVVW +P LIII L +TW +TH L+P K + A D+ PI + Sbjct: 81 KATYDPNFEHSNRIEAVVWAIPTLIIIALGTVTWISTHELDPHKKVEAAADKVGVTPIEV 140 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 +VV++DWKW FIYP+ GIATVNE+A P PV+F++TS SVMNSFFIP+LG+QIYAM GM Sbjct: 141 QVVALDWKWLFIYPQYGIATVNEMAMPVGVPVHFEITSASVMNSFFIPQLGTQIYAMNGM 200 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 QT L L A+ G YDGISA+YSG GF+ MKFKA A D+ FD WVA AK S T+ D Sbjct: 201 QTHLSLRADHAGVYDGISANYSGFGFAEMKFKAKAV-DQTGFDAWVASAKASGQTL-DTG 258 Query: 250 AFEKLAAPSEYNQVEYFSNVKPDLFADVIN 279 A++ L S Y++ V+P LF ++N Sbjct: 259 AYKTLHQKSTLKAPAYYAAVQPALFTKILN 288 >UniRef50_C4XNK3 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNK3_DESMR Length = 319 Score = 289 bits (740), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 140/261 (53%), Positives = 183/261 (70%), Gaps = 3/261 (1%) Query: 22 LSGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 LSGC+ ALLDPKG IG +R LI AFGLMLIVVIP I+MAV F KYR SN +A+Y+P Sbjct: 21 LSGCSELALLDPKGPIGEAERRLIFIAFGLMLIVVIPVIVMAVWFPHKYRESNTEAEYAP 80 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 WSHS K+E V+W +P++I+I L+ L W TH L+P KPLA +K + +EVVS+DWKW F Sbjct: 81 KWSHSGKIELVMWLIPMVIVILLSTLLWIETHRLDPYKPLAAPDKQLPVEVVSLDWKWLF 140 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 IYP QG+A VNE+ FPA P+ F +TS++VM SFFIPRLGSQIYAM GM+T+LHL+A+ Sbjct: 141 IYPRQGVAVVNELVFPAGMPLAFDITSDTVMTSFFIPRLGSQIYAMGGMRTKLHLLADTE 200 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G Y G + +SG G+ M F A A +A FD W+ K K SP T+ +M F++L P Sbjct: 201 GEYVGQNQQFSGAGYPDMFFPARAV-SQAGFDAWLQKVKASPETL-NMTRFDELRKPGVA 258 Query: 261 NQVEYFSNVKPDLFADVINKF 281 YFS ++P +F ++ K+ Sbjct: 259 AAPVYFSKIEPGIFEAILGKY 279 >UniRef50_Q89AA3 Ubiquinol oxidase subunit 2 n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=CYOA_BUCBP Length = 286 Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 131/278 (47%), Positives = 186/278 (66%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M+ KY + L + ++GC+ +L P G I EQR ++ +F ML+++IP I Sbjct: 1 MQFIKYKSYILKFLLVSCIFCINGCDCTILCPNGLIAQEQRFVLFVSFFTMLLIIIPVIF 60 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 M + F +YR SN Y P WSHSN +E ++W +PI+II+FL++ +WK+ H L+P KP+ Sbjct: 61 MTIFFVLRYRESNFSKTYDPKWSHSNIIELLIWGIPIIIIVFLSIFSWKSVHDLDPKKPI 120 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 + +PI I V+S+DWKW FIYP+Q IAT+N++ P NTP+ F +TS SVMNSFFIP LG Sbjct: 121 VSNVQPIKINVISLDWKWLFIYPDQKIATINKLIIPINTPIIFNLTSGSVMNSFFIPSLG 180 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 SQIY M GM+T L+LIAN+ G + G S++YSG GFS MKF + T D F +WV K ++ Sbjct: 181 SQIYVMPGMKTNLNLIANKLGQFKGFSSNYSGKGFSNMKFDVLVTSDHIFFYEWVKKIQK 240 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVI 278 S ++ M F +LA PS+ N ++YFSN+K +LF VI Sbjct: 241 SKYKLNSMYQFNQLAIPSDNNAIKYFSNLKENLFNVVI 278 >UniRef50_Q5FPP7 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Gluconobacter oxydans RepID=Q5FPP7_GLUOX Length = 312 Score = 276 bits (706), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 134/294 (45%), Positives = 190/294 (64%), Gaps = 11/294 (3%) Query: 20 VLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 ++LSGC LL P+G + R +++ F +M++VV+P + FAWKYRASNK+A+Y Sbjct: 20 LMLSGCTVDLLQPRGPVAEMNRDVMVAEFVIMMLVVVPTCAATLYFAWKYRASNKEAEYL 79 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL--AHDEKPITIEVVSMDWK 137 P W HS +E V+W VP ++I L ++W +THA +P +PL A + KP+ ++VVS+DWK Sbjct: 80 PTWDHSTAIEYVIWGVPAILIALLGAISWWSTHAYDPYRPLQTADNVKPLNVQVVSLDWK 139 Query: 138 WFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197 W FIYP+ GIAT+N++ P NTP+ F++TS+SVM SFFIPRLGS IYAM G QT+LHL+A Sbjct: 140 WMFIYPDLGIATINQLDVPTNTPLNFQITSDSVMTSFFIPRLGSMIYAMPGEQTQLHLLA 199 Query: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAP 257 +E G Y G ++ +SG GFS MKF+ +A D A F+ WV K K + D + K AAP Sbjct: 200 SESGDYLGEASQFSGRGFSDMKFRTLAM-DPAQFNDWVEKVKSGSENLDD-TTYPKYAAP 257 Query: 258 SEYNQVEYFSNVKPDLFADVINKF-------MAHGKSMDMTQPEGEHSAHEGME 304 E V+YF++V+PDLF ++ K+ GK M M + GM+ Sbjct: 258 QEAAPVQYFAHVQPDLFDGIVAKYNNGMMVDKKTGKVMHMQSASNAAPSDTGMK 311 >UniRef50_Q6F9R5 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F9R5_ACIAD Length = 353 Score = 276 bits (705), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 150/335 (44%), Positives = 199/335 (59%), Gaps = 48/335 (14%) Query: 10 LGWLSLFAGTVLLSGC--NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 L LSL LL+GC + LL+ KG +G Q +L++TA LML+VVIP+++MA+ F+W Sbjct: 6 LAVLSLSTIAALLTGCGGDMVLLNSKGPVGQGQSNLMMTAIYLMLLVVIPSVIMALWFSW 65 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 KYRASNKDA Y P W+HS +E VVW VP++II LA LTW +H +P +PL D+ P+ Sbjct: 66 KYRASNKDADYKPTWAHSTAIEIVVWGVPVIIIGILAWLTWWGSHKYDPYRPLESDKAPL 125 Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 TI+V++ +KW F+YPEQ IATVNE+ FP TP+ FK+TSN MNSFFIP+LG QIYAMA Sbjct: 126 TIQVIAEQFKWIFVYPEQNIATVNEVRFPEKTPLSFKITSNFTMNSFFIPQLGGQIYAMA 185 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT--- 244 GMQT LHL+A++PG + G+S++YSG GFS M FKA + + A F QWV K T Sbjct: 186 GMQTHLHLMADQPGVFRGMSSNYSGYGFSQMHFKAYSVTE-AEFTQWVDAVKAGKGTGVN 244 Query: 245 ------------------------------------MSDMAAFEKLAA----PSEYNQVE 264 D A K A P++ + V Sbjct: 245 PEAIQKGILDQAELATLKDGDRSKHQIEALVHRAQAAGDAEALAKAEAMKPFPNKPHPVT 304 Query: 265 YFSNVKPDLFADVINKFMA--HGKSMDMTQPEGEH 297 Y+S+V+P LF VIN++M+ HG T G Sbjct: 305 YYSSVEPKLFETVINRYMSNYHGADHSATAEHGSQ 339 >UniRef50_C9YAW0 Ubiquinol oxidase subunit 2 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAW0_9BURK Length = 373 Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 139/297 (46%), Positives = 191/297 (64%), Gaps = 17/297 (5%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSAL-LDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +L+ + K L WL+ A L+GC+ A+ L+P G I +Q +++TA LMLI+++P I Sbjct: 28 KLKAFRK-LSWLAAMAMAAGLTGCSKAVVLNPAGDIAAQQGQMVITATLLMLIIIVPVIA 86 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP---- 116 + + FAWKYR SN +A+Y P W HS +E V+WTVP+LIII L LTW TH L+P Sbjct: 87 LTLFFAWKYRQSNTEAEYDPEWHHSTSLELVIWTVPLLIIIALGALTWIGTHKLDPYRPL 146 Query: 117 -----SKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVM 171 +PL D KP+ ++VV+MDWKW F YPEQGIATVNE+A P + P+ FK+T+ S M Sbjct: 147 DRIDAQRPLPADAKPMEVQVVAMDWKWLFFYPEQGIATVNELAAPVDRPILFKLTATSTM 206 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFK--AIATPDRA 229 N+F++P L IYAM GMQT L+ + N PG + G+S+ YSG GFSGM FK ++ D A Sbjct: 207 NAFYVPDLAGMIYAMPGMQTELNAVINRPGVFKGMSSHYSGAGFSGMTFKFHGLSNEDFA 266 Query: 230 AFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGK 286 A WV KAK T+ D A + L PSE + V+ FS V+ L+ V+N+ + GK Sbjct: 267 A---WVNKAKTEGKTL-DKATYTNLVKPSERDPVQRFSTVEAGLYDKVLNRCVEDGK 319 >UniRef50_Q8L312 Cytochrome bo subunit A n=1 Tax=Vitreoscilla sp. C1 RepID=Q8L312_VITS1 Length = 325 Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 136/290 (46%), Positives = 193/290 (66%), Gaps = 22/290 (7%) Query: 13 LSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 LS LL+GC L+D KGQ+G+EQR+LI +ML+VVIPAI M++ FAWKYR Sbjct: 8 LSFITLAALLAGCGEGYVLIDSKGQVGIEQRNLIYIQIVMMLLVVIPAIAMSLWFAWKYR 67 Query: 71 ASNK--DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 +NK + +Y+PNW +S+K+E VW VP +II+ +AV++W+ TH L+P +PL D++ I Sbjct: 68 HNNKAVEKEYAPNWDYSHKIEMWVWAVPCIIILIMAVISWRATHKLDPYRPLDSDKEHIQ 127 Query: 129 IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 I+ ++ ++W F+YP + IATVNEI FP N PV F +TS+ MNSFFIP+LG Q+YAMAG Sbjct: 128 IQAIAAPYQWVFVYPNENIATVNEIYFPDNQPVNFVITSDFSMNSFFIPQLGGQVYAMAG 187 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM 248 M+T+LHLIANE G Y+G SA+YSG GFS MKFKA A A ++ W+ + K S NT++ M Sbjct: 188 MKTQLHLIANEQGVYEGTSANYSGHGFSKMKFKAHAV-SGAEYENWIKQVKASQNTLT-M 245 Query: 249 AAFEKLAAPSEYNQ----------------VEYFSNVKPDLFADVINKFM 282 F+ L P V+YF V+ +LF ++++++M Sbjct: 246 QKFKSLQEPVRQTTVGVPHVKRTESPKPEPVQYFGTVENNLFQNIVDQYM 295 >UniRef50_A1BCC4 Ubiquinol oxidase, subunit II n=36 Tax=Proteobacteria RepID=A1BCC4_PARDP Length = 400 Score = 273 bits (699), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 135/293 (46%), Positives = 189/293 (64%), Gaps = 15/293 (5%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 +RK+ + L WL+L + L+ C + +L P G + QR L++ + LML++++P +++ Sbjct: 4 IRKFAR-LPWLALL---IPLAACKAEVLAPAGDVAARQRDLLVISTLLMLLIIVPVMVLT 59 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP------ 116 V FA +YR NKDA Y P+W HS K+E V+W P+LIII L LTW TH L+P Sbjct: 60 VVFARRYRERNKDADYRPDWDHSTKLEFVIWGAPLLIIITLGALTWVGTHLLDPYRPLDR 119 Query: 117 ---SKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNS 173 +PL + +P+ ++VV+MDWKW FIYPEQGIA+VNE+A P + PV F +TS SVMN+ Sbjct: 120 ISADRPLTEEHRPLPVQVVAMDWKWLFIYPEQGIASVNEMAVPVDRPVEFTLTSTSVMNA 179 Query: 174 FFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 F+IP + IYAM GM+T+L+ + N PG Y GI++ YSG GFSGM FKA AT D A FD Sbjct: 180 FYIPAMAGMIYAMPGMETKLNGVFNHPGEYKGIASHYSGHGFSGMHFKAHAT-DEAGFDA 238 Query: 234 WVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGK 286 W+ KA+ S T+ D + +L APSE F+ V P LF ++N + GK Sbjct: 239 WIEKARASGGTL-DRPRYLELEAPSENVPPMSFAEVDPHLFQRIVNMCVEPGK 290 >UniRef50_B0VM15 Cytochrome o ubiquinol oxidase subunit II n=14 Tax=Acinetobacter RepID=B0VM15_ACIBS Length = 350 Score = 271 bits (692), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 190/325 (58%), Gaps = 44/325 (13%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNW 82 G + LL+ KG +G Q L++TA LML+VVIP+I+MA+ F WKYRASNKDA Y P W Sbjct: 21 CGGDMVLLNSKGPVGQGQSDLMMTAIYLMLLVVIPSIIMALWFGWKYRASNKDADYKPTW 80 Query: 83 SHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY 142 +HS +E VVW +P++II LA LTW +H +P +PL D+ P+TI+V++ +KW FIY Sbjct: 81 AHSTAIEVVVWGIPVIIIGILAWLTWWGSHKYDPYRPLESDKAPLTIQVIAEQFKWIFIY 140 Query: 143 PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 PEQ IATVNE+ FP TP+ FK+TSN MNSFFIP+LG QIYAMAGMQT LHL+ANE G Sbjct: 141 PEQNIATVNEVRFPEKTPLSFKITSNFTMNSFFIPQLGGQIYAMAGMQTHLHLLANETGV 200 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM----------------- 245 Y G S++YSG GFS M+FKA + ++ F++WVA K T Sbjct: 201 YRGFSSNYSGYGFSQMRFKAHSVTEQ-QFNEWVAAVKAGNGTTINPEAVQKTTLDQAELA 259 Query: 246 ----------------------SDMAAFEKLAA----PSEYNQVEYFSNVKPDLFADVIN 279 D A K A P++ + V Y+S+V+P LF +IN Sbjct: 260 TLRDGDRSKHQIEHLVNRAKAAGDQEALAKAEAMKPFPTKPHPVTYYSSVEPKLFETIIN 319 Query: 280 KFMAHGKSMDMTQPEGEHSAHEGME 304 +M++ D + H E Sbjct: 320 HYMSNYHGADHSAAHTTAETHVAAE 344 >UniRef50_B0UDY1 Ubiquinol oxidase, subunit II n=26 Tax=Proteobacteria RepID=B0UDY1_METS4 Length = 426 Score = 270 bits (690), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 139/307 (45%), Positives = 190/307 (61%), Gaps = 19/307 (6%) Query: 15 LFAGTVL-----LSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 L AG +L L+GCN +++P G + ++QR+LIL + LML+V++P I + FAW+Y Sbjct: 35 LRAGALLAVAGSLAGCNLVVMNPSGDVAIQQRNLILASTALMLLVIVPVIALTFVFAWRY 94 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH--DEKPI 127 RASN DA Y P+W HS ++E V+WTVP+LIII L +TW +TH L+P +PLA KP+ Sbjct: 95 RASNHDAPYDPDWHHSTQLEVVIWTVPLLIIIALGAMTWVSTHTLDPYRPLARIGPNKPV 154 Query: 128 -------TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 ++VV++DWKW F+YP+ GIATVNE+A PAN P+ FK+TS+SV N+F++P L Sbjct: 155 PPGIDHLNVQVVALDWKWLFLYPDLGIATVNEMAAPANVPIAFKITSSSVWNTFYVPALA 214 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 IYAM GMQT LH + N G + G SA YSG GFS M F + + FD WVAK K Sbjct: 215 GMIYAMPGMQTNLHAVMNHEGDFRGQSAHYSGSGFSRMNFD-FRSLSQQGFDAWVAKVKA 273 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 S T D AA+ L PSE + V Y+ V+ L+ ++ + G+ M E H Sbjct: 274 S-GTALDRAAYLALEKPSEADPVRYYGRVESGLYDAILGLCVEPGR---MCVAEMHHIDK 329 Query: 301 EGMEGMD 307 G G D Sbjct: 330 AGGAGRD 336 >UniRef50_Q0BNW9 Cytochrome o ubiquinol oxidase subunit II n=16 Tax=Francisella RepID=Q0BNW9_FRATO Length = 300 Score = 266 bits (681), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 142/307 (46%), Positives = 189/307 (61%), Gaps = 13/307 (4%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 + K L LS G + LSGC + +P G I +++ L++ A LML VV+P I++ + F Sbjct: 3 WKKYLLILSSVVGVLSLSGCKGGIWNPMGVITAQEKQLLIFAIVLMLFVVVPVIILILCF 62 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 AWKYR +A+Y P WSHSNK+E + W VP +II+ LA++TWKTTH+L P KPL D+K Sbjct: 63 AWKYR-DGANAEYRPTWSHSNKLEIICWGVPFIIILILAIVTWKTTHSLSPYKPLESDKK 121 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 P+ I+VV+++WKW FIYPE IATVN I P + P+ FK+TS + MNSFFIP L QIYA Sbjct: 122 PVEIDVVALNWKWMFIYPEYDIATVNYIEIPKDRPINFKITSAAPMNSFFIPELAGQIYA 181 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 M GM T+LHLIA G Y G SA+Y+G GF+ M+F A T D+A FD+WV K + Sbjct: 182 MTGMTTQLHLIATHEGKYRGFSANYTGIGFAEMEFFAKVT-DQADFDKWVKDVKNGKHQS 240 Query: 246 SDMAAF-EKLAAPSEYNQVEYFSNVKPDLFADVINKFMA-HGKSMDMTQPEGEHSAHEGM 303 F L S N V Y+S+V +LF D++ +M + K DM M Sbjct: 241 LTWDYFWSDLFKDSIDNPVAYYSHVDKNLFNDIVMSYMMPNYKPGDMAS---------NM 291 Query: 304 EGMDMSH 310 GM M H Sbjct: 292 SGMHMHH 298 >UniRef50_Q1GEA0 Ubiquinol oxidase subunit II n=2 Tax=Proteobacteria RepID=Q1GEA0_SILST Length = 363 Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 133/281 (47%), Positives = 185/281 (65%), Gaps = 11/281 (3%) Query: 8 KSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 + L +L + LSGCN LL P G I +Q LI+ + LMLIV+IP + + V FA+ Sbjct: 2 RYLRFLCCALAFLTLSGCNLVLLSPSGDIAAQQGDLIVYSTVLMLIVIIPVMALTVFFAF 61 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP---------SK 118 KYRA NKDA+Y P+W HS +E VVW VP+ III LA LTW TH LEP +K Sbjct: 62 KYRAENKDARYEPDWDHSVSLEIVVWFVPLAIIICLAGLTWVATHRLEPYDDLRRVSETK 121 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 P+ + +P+ ++VV++DWKW FIYPE G+ATVNE A + PV +K+TS++VMN+F+IP Sbjct: 122 PIDPNVEPMEVQVVALDWKWLFIYPEYGVATVNEAAAIVDRPVEWKLTSSTVMNAFYIPE 181 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 + IYAMAGM+T L+ + NEPGT++G SA+YSG GFS M+F IA D A F+ W+ + Sbjct: 182 MAGMIYAMAGMETELNAVINEPGTFEGFSANYSGNGFSHMRFDFIAE-DEAGFEAWIEEV 240 Query: 239 KQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVIN 279 + S T+ D ++ L PS ++VEYF V+ L+ ++N Sbjct: 241 RASGMTL-DQDSYAVLEQPSVAHEVEYFGAVEDGLWDKILN 280 >UniRef50_C6XEZ5 Ubiquinol oxidase, subunit II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XEZ5_LIBAP Length = 332 Score = 263 bits (672), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 127/297 (42%), Positives = 185/297 (62%), Gaps = 11/297 (3%) Query: 20 VLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 V+LSG ++DP G I L+Q SLI A LML++V+P + FAWKYR++NK A+Y Sbjct: 26 VMLSGFEFIVMDPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYD 85 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP---------SKPLAHDEKPITIE 130 P W HS +E VW VP++I+ FLAV+TW TH ++P SK +A + KP+ +E Sbjct: 86 PKWCHSTLLELFVWLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVE 145 Query: 131 VVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 VV++DWKW F+ PEQ +A +NE+ P + P+ F++T++SVMNSF+IP L QIYAMAGM+ Sbjct: 146 VVALDWKWLFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGME 205 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 T+LH + N+ G Y G SA+YSG GFS M+FK ++ F+ W++K K+ T + Sbjct: 206 TKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKSEK-GFEDWISKVKRQ-GTFLNRQE 263 Query: 251 FEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMD 307 + L PSE + V YFS ++ L+ ++N + GK + GM G+D Sbjct: 264 YLLLKKPSERDSVRYFSPIEKGLYYSILNLCVHPGKICMDEMMRIDALGGGGMRGID 320 >UniRef50_D0ST29 Ubiquinol oxidase, subunit II n=2 Tax=Acinetobacter RepID=D0ST29_ACILW Length = 364 Score = 260 bits (664), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 146/329 (44%), Positives = 200/329 (60%), Gaps = 46/329 (13%) Query: 10 LGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 L LSL A T LL+GC LL+ KG + Q +L++TA LML+VVIP+I+MA+ F W Sbjct: 6 LAVLSLSAMTALLTGCGGDMVLLNSKGPVAAGQSNLMMTAIYLMLLVVIPSIIMALWFGW 65 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 KYRASNKDA Y P W+HS +E VVW +P++II LA LTW +H +P +P+ D+ P+ Sbjct: 66 KYRASNKDADYKPTWAHSTAIEIVVWGIPVIIIGILAWLTWWGSHKYDPYRPIEADKAPL 125 Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 T++V++ +KW FIYPEQGIATVNE+ FP TPV ++TSN MNSFFIP L QIYAMA Sbjct: 126 TVQVIAEQFKWIFIYPEQGIATVNELRFPEQTPVSLRLTSNFTMNSFFIPALSGQIYAMA 185 Query: 188 GMQTRLHLIANEPG---TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ---- 240 GMQT L+ +A+E Y G S++YSG GFS M+F+A + D A F +W++ + Sbjct: 186 GMQTHLNFLADETSPAEGYRGFSSNYSGYGFSQMRFRAHSVTD-AQFAEWISAVQAGNGT 244 Query: 241 --SPN----TMSDMAAF------------------------EKLAA------PSEYNQVE 264 +PN T+ D A F EK AA P++ + V Sbjct: 245 SVNPNAVQKTVLDQAEFATLRDGNRGKHQIEAIIAKAETPEEKAAAEAMKPYPTKPHPVT 304 Query: 265 YFSNVKPDLFADVINKFMAHGKSMDMTQP 293 Y+S+V+ LF VI+K+M++ D + P Sbjct: 305 YYSSVEQGLFESVIHKYMSNYHGADHSAP 333 >UniRef50_A4G8I7 Ubiquinol oxidase subunit 2 (Ubiquinol oxidase polypeptide II) (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit 2) n=7 Tax=Proteobacteria RepID=A4G8I7_HERAR Length = 355 Score = 256 bits (653), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 130/285 (45%), Positives = 184/285 (64%), Gaps = 12/285 (4%) Query: 25 CNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 C+ LL+P G I +Q LI+ + LML+V++P I++ + FAW+YR +N AKY P+W H Sbjct: 26 CDWVLLNPSGDIAAQQGQLIIVSVLLMLLVIVPVIILTLIFAWRYRKNNTSAKYEPDWDH 85 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE---------KPITIEVVSMD 135 S K+E ++W P+LIII L ++TW +TH L+P +PL + +P+TIEVV++D Sbjct: 86 STKLELIIWGGPLLIIIVLGLITWVSTHKLDPYRPLDRLDANRPISAAAEPLTIEVVALD 145 Query: 136 WKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 WKW FIYPEQGIATVNE+A P + PV FK+TS++VMNSF+IP L QIY MAGM+T+L+ Sbjct: 146 WKWLFIYPEQGIATVNELATPVDVPVRFKLTSSTVMNSFYIPELAGQIYTMAGMETQLNA 205 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLA 255 + N+P +G SA+YSG GFS M+FK D F++WV K K + D A+ +L Sbjct: 206 VINKPVESEGFSANYSGAGFSHMRFKYHGM-DVEDFNRWVKKVKAEGGKL-DRTAYLELE 263 Query: 256 APSEYNQVEYFSNVKPDLFADVINKFMAHGK-SMDMTQPEGEHSA 299 PSE V Y+ V DL+ ++N+ + G MD + H A Sbjct: 264 KPSEREPVTYYKTVSSDLYGAILNRCVEEGSVCMDQMMRDDAHRA 308 >UniRef50_Q0FH64 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FH64_9RHOB Length = 377 Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/269 (47%), Positives = 173/269 (64%), Gaps = 9/269 (3%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD-AKYSPN 81 SGC +L P G +G +QR L++ + LMLIV++P + M+V F KYRA +D + Y P Sbjct: 18 SGCQYDVLSPAGWVGDQQRDLLIISVLLMLIVILPVLFMSVYFPLKYRADREDTSDYDPE 77 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK--PITIEVVSMDWKWF 139 + HSNK+EAVVW VPILII+ L T+ TH L+P +PL H E P+ I+ VS+DWKW Sbjct: 78 FEHSNKLEAVVWGVPILIIVALGYYTYVYTHRLDPYRPLDHLEAGAPVEIQAVSLDWKWL 137 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 FIYPEQGIA+VNE+ PA P+ F ++S++VMN+ IP LG +Y+MAGM+T+LHLIA+E Sbjct: 138 FIYPEQGIASVNELVVPAGRPINFSLSSSTVMNTLSIPALGGMVYSMAGMETKLHLIADE 197 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA--KAKQSPNTMSDMAAFEKLAAP 257 G Y G SA YSGPGF+GM F AT D FD WV +A+ P A E+ P Sbjct: 198 EGVYPGRSAHYSGPGFAGMVFDTTATSDE-EFDAWVEGIRAEAGPLNRETYLALEE---P 253 Query: 258 SEYNQVEYFSNVKPDLFADVINKFMAHGK 286 S V ++ +V+ LF ++ + GK Sbjct: 254 SMNVPVSHYGSVEDGLFGRIVEMCVEDGK 282 >UniRef50_A0NWL4 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWL4_9RHOB Length = 310 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/284 (43%), Positives = 181/284 (63%), Gaps = 6/284 (2%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGC---NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 R+R +S L +L GC ++ +L PKG I L +R L+ TAFG+M+IV IPA Sbjct: 9 RVRAALRSAATAGLICSVPVLQGCALSDAPVLFPKGPIALAERDLLFTAFGIMMIVAIPA 68 Query: 59 ILMAVGFAWKYRASNKD-AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 IL+ + FAW+YR ++ A Y+P W S +EAVVW VP I++ + + W TH L+P Sbjct: 69 ILLTLLFAWRYRKRTRNTADYAPEWDGSWGIEAVVWLVPAAIVVVIGTIVWDATHRLDPY 128 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 KPLA D+ ++ V++DWKW F+YPE G A+VNE+AFPA+ P+ ++TS++VMNS IP Sbjct: 129 KPLAADKPAFKVQAVALDWKWLFLYPELGTASVNELAFPADRPLTIEITSDTVMNSLMIP 188 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 LG QIYAMAGM++ ++LIA+ PGT++G + YSG GFS FKA A + A F W K Sbjct: 189 ALGGQIYAMAGMRSEMNLIADGPGTFNGRNTMYSGDGFSDQHFKAHAMSE-ADFAAWKEK 247 Query: 238 AKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 + + + D A+ L S + V Y+S+ + DLF+ ++ K+ Sbjct: 248 VTGAADVL-DAKAYVDLHKQSVADPVRYYSSFETDLFSIILRKY 290 >UniRef50_B9R6J2 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R6J2_9RHOB Length = 326 Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/265 (46%), Positives = 175/265 (66%), Gaps = 6/265 (2%) Query: 21 LLSGC---NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD-A 76 L+SGC + +L P+G I L QR L+ TAF LM+IV IPAIL+ + F ++YR+ + A Sbjct: 44 LVSGCALSEAPILYPQGPIALAQRDLLFTAFWLMMIVAIPAILLTLLFVYRYRSRHHSTA 103 Query: 77 KYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 Y+P W S K+E VVW VP III L L W+ TH L+P K LA D+ P ++ +++DW Sbjct: 104 AYTPEWEGSWKIETVVWLVPAAIIIVLGTLVWRDTHKLDPYKELASDKPPFEVQAIALDW 163 Query: 137 KWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 KW F+YPE G+A+VNE+AFPA+ P+ K+TS++VMNS IP LG QIYAMAGM+T ++L+ Sbjct: 164 KWLFVYPELGVASVNELAFPADRPLSIKITSDTVMNSLMIPALGGQIYAMAGMRTEMNLL 223 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 A+ PGT+ G + YSG GFS F A A + A F W K SP+ + D + ++ Sbjct: 224 ADGPGTFKGRNTMYSGDGFSDQNFLAHALTE-ADFTAWKEKVTGSPDAL-DAKTYLEVTK 281 Query: 257 PSEYNQVEYFSNVKPDLFADVINKF 281 S N V Y+S+V+P+LF ++ K+ Sbjct: 282 QSVANPVAYYSSVEPNLFGLILRKY 306 >UniRef50_Q057E8 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057E8_BUCCC Length = 292 Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 128/253 (50%), Positives = 163/253 (64%), Gaps = 1/253 (0%) Query: 30 LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVE 89 ++ G I + L+L F +M I+V P +++ + YR SN KY+PNW HS +E Sbjct: 34 VNVSGYISKLEFELMLLVFKIMFIIVFPVLMLVFFIVYYYRHSNTSEKYTPNWKHSYFLE 93 Query: 90 AVVWTVPILIIIFLAVLTWKTTHALEPSKPL-AHDEKPITIEVVSMDWKWFFIYPEQGIA 148 + W +PI II FLA L+W TTH+LEPSK L + KPITIEVVS++W+W FIYP IA Sbjct: 94 IICWLIPIFIISFLAFLSWNTTHSLEPSKKLKVNINKPITIEVVSLNWRWLFIYPYYKIA 153 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 T+NEI+FP N PV FK+TSNSVMNSFFIP LGSQIY MAGM+T L+LIA G Y GIS+ Sbjct: 154 TINEISFPKNVPVNFKITSNSVMNSFFIPNLGSQIYTMAGMKTELNLIALSNGIYKGISS 213 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSN 268 +YSG GFS MKFK D F++W+ K K +S F L+ S+ + EYFS Sbjct: 214 NYSGNGFSNMKFKVYVQNDLFHFNKWIKKVKSKKKFLSFKKQFLNLSKNSKKYKNEYFSY 273 Query: 269 VKPDLFADVINKF 281 P LF +I F Sbjct: 274 TDPLLFYKIIKIF 286 >UniRef50_C8SDL6 Ubiquinol oxidase, subunit II n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SDL6_9RHIZ Length = 340 Score = 240 bits (612), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 177/292 (60%), Gaps = 5/292 (1%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 K + L W+ A GC +LDP+G IG R+++L + +ML++V+P ++ + Sbjct: 29 KPGRQLFWVPAIA---FFPGCAGGVLDPQGPIGSGNRTILLNSLAVMLVIVVPTLVALLA 85 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 FAWK+RASN +A+Y P +++S ++E +VW++P L I FL L + ++ L+P KP+ + Sbjct: 86 FAWKFRASNSNARYDPEFTYSGRIELIVWSIPTLTIFFLGGLIYYGSYQLDPRKPIPSAQ 145 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 P+ I+VV++DWKW F+YPEQG+ VN++ PA PV+FK+TS SVMN+FF+P+LGS +Y Sbjct: 146 PPLDIQVVALDWKWLFLYPEQGVGAVNQLVIPAGVPVHFKLTSASVMNTFFVPQLGSMVY 205 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 M GMQT LHL A+ G++ G SA +SG GFS M F A AF +W + + Sbjct: 206 VMNGMQTELHLQADREGSFYGQSAHFSGDGFSDMNFSVSAV-SADAFARWASSLRGGGGV 264 Query: 245 MSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGE 296 + + A+ +LA S F +V+P LF V + + G + GE Sbjct: 265 L-NANAYRELARQSTNVAPSTFGHVQPGLFDAVAQQTLPPGPGPAESAAGGE 315 >UniRef50_A9KG38 Cytochrome c oxidase polypeptide II n=7 Tax=Legionellales RepID=A9KG38_COXBN Length = 310 Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 123/286 (43%), Positives = 175/286 (61%), Gaps = 13/286 (4%) Query: 6 YNKSLGWLSLFAGTVL----LSGCNS----ALLDPKGQIGLEQRSLILTAFGLMLIVVIP 57 Y K++ LF G ++ L+GC+S +L P+G + E+R L + LMLIVVIP Sbjct: 12 YLKNIIKFLLFVGVLVAGLSLAGCHSLRGGGILHPEGTVSFEERQLFFDSLALMLIVVIP 71 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 +M+ F +YRA +K + Y PNW HS +E + W VP III L ++TW TH L+P Sbjct: 72 VFIMSFTFIVRYRAGHKTSDYKPNWGHSVLLETIWWGVPCGIIIILGIMTWTLTHKLDPY 131 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSV-MNSFFI 176 + + KP+ I+ V++ WKW FIYPEQ ATVN + P + F +T++ V M++FFI Sbjct: 132 RRIDTPGKPLLIQAVALPWKWLFIYPEQNFATVNYLELPKGRQIEFWLTNDHVPMSAFFI 191 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKA-IATPDRAAFDQWV 235 P LGSQIY MAGM+TRLHL+A + G Y G+ Y+G GFS M+F+ + PD W Sbjct: 192 PELGSQIYTMAGMRTRLHLVALKDGNYWGLDTQYNGDGFSDMRFQVKVVEPDE--LQHWF 249 Query: 236 AKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 KAKQS ++ + ++KL PS + V YFS+V P+LF +I K+ Sbjct: 250 EKAKQSKEQLT-LQLYQKLIQPSAKDPVRYFSSVAPNLFPQIIMKY 294 >UniRef50_B6YZ13 Ubiquinol oxidase, subunit II n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YZ13_9RHOB Length = 282 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 124/278 (44%), Positives = 169/278 (60%), Gaps = 3/278 (1%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 S + DPKG I + +R L+ TAF +MLIVVIP M F W+YRA +Y P+W S Sbjct: 3 TSPVADPKGPIAIIERDLLYTAFFIMLIVVIPVYFMVFWFIWRYRAKGGTGEYKPDWHKS 62 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 +E VW++P III L L W ++ L+P K +A E I ++VV+ DWKW FIYP+ Sbjct: 63 TIIEVFVWSIPAAIIITLGYLVWTYSYKLDPYKKIATPENTINVQVVAQDWKWLFIYPDL 122 Query: 146 GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDG 205 GIA+VNE+AFP + V K+TS++VMNS IP LG QIYAMAGM + L+L ANE G + G Sbjct: 123 GIASVNELAFPVDKAVSMKLTSDTVMNSLLIPALGGQIYAMAGMTSELNLKANETGRFRG 182 Query: 206 ISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEY 265 + YSG GF+ F A+A + F WVA AK +S + +++LA PS + VEY Sbjct: 183 RNTQYSGDGFAMQFFDAVAMTEE-EFQDWVANAKAQSKPLSTV-TYDQLAQPSIAHGVEY 240 Query: 266 FSNVKPDLFADVINKFMAHGK-SMDMTQPEGEHSAHEG 302 FS VKP LF +++ K+ + ++ P A EG Sbjct: 241 FSWVKPGLFEEILKKYARRPETTLRRHAPATTQPACEG 278 >UniRef50_D0D3A4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella sp. SE45 RepID=D0D3A4_9RHOB Length = 413 Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 125/269 (46%), Positives = 180/269 (66%), Gaps = 9/269 (3%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD-AKYSPN 81 +GC +L P+G +G +QR L++ + LMLIV++P + M+V F KYRA ++ + Y P Sbjct: 44 TGCQYNVLSPQGWVGEQQRDLLILSTLLMLIVIVPVLFMSVYFPLKYRADRENTSDYDPE 103 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE--KPITIEVVSMDWKWF 139 + HSNK+EAVVW VPILII+ L T TH L+P +PL + + +PI ++ VS+DWKW Sbjct: 104 FEHSNKLEAVVWGVPILIIVVLGYYTAVYTHRLDPYRPLDYLDAGEPIEVQAVSLDWKWL 163 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 FIYPE G+A+VNE+A PA PV F +TS++VMN+ IP LG +Y+MAGM+T+LHLIA+ Sbjct: 164 FIYPELGVASVNELAIPAGRPVNFSLTSSTVMNTLSIPALGGMVYSMAGMETKLHLIADS 223 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA--KAKQSPNTMSDMAAFEKLAAP 257 GTY+G SA YSGPGF+GM F+ ++ + F+ WV +A+ P T A E AP Sbjct: 224 EGTYEGRSAHYSGPGFAGMVFETMSM-NEDEFNGWVENLRAEGQPLTADSYLALE---AP 279 Query: 258 SEYNQVEYFSNVKPDLFADVINKFMAHGK 286 + + V Y+S+V+ LF ++ +A GK Sbjct: 280 TMNDPVSYYSSVEDGLFDRIVGLCVAEGK 308 >UniRef50_Q6MBY6 Probable cytochrome o ubiquinol oxidase chain II cyoA n=2 Tax=Parachlamydiaceae RepID=Q6MBY6_PARUW Length = 295 Score = 233 bits (593), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 115/259 (44%), Positives = 170/259 (65%), Gaps = 2/259 (0%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 A+L P+G + +++R+L+L LML+VVIP ++ F+WKY A N KY P+ + Sbjct: 38 AILFPEGWVAVKERNLLLIIQALMLLVVIPVYILTFVFSWKYSADNPKGKYDPDLVDNKF 97 Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI 147 E + W +P+++IIFL+VLTW T L+P KP+ D+K ITI+V+++ WKW FIYPE+ I Sbjct: 98 AEFIWWGIPLVLIIFLSVLTWVKTAELDPYKPIISDKKEITIQVIALQWKWLFIYPEEKI 157 Query: 148 ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 AT+N + P +TP++F++T+++ MNSF+IP LG QIYAM MQT L+LIAN G Y G S Sbjct: 158 ATINFLQIPQDTPIHFEITADAPMNSFWIPELGGQIYAMPSMQTELYLIANHTGDYRGSS 217 Query: 208 ASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFS 267 A+ SG GFSGM F ++ + + QW+ AKQS N + + + +A PS+ N VE + Sbjct: 218 ANLSGEGFSGMNFITRSSTEE-EYQQWLTSAKQSNNIL-NQNEYNLIAKPSKNNPVEIYR 275 Query: 268 NVKPDLFADVINKFMAHGK 286 + LF I+K+M K Sbjct: 276 LEENSLFDLTIDKYMYPQK 294 >UniRef50_A1UU71 Cytochrome o ubiquinol oxidase, subunit II n=5 Tax=Bartonella RepID=A1UU71_BARBK Length = 323 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 119/293 (40%), Positives = 178/293 (60%), Gaps = 19/293 (6%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 +R + K + L++ +LLSGC +L P G + +Q LI +ML VVIP ++ Sbjct: 1 MRSFVKQIEMLTILGVGLLLSGCKIDVLQPAGYVARQQLILIAICVFVMLCVVIPVMVAV 60 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL-- 120 + A KYRASN A Y P+W HSNKVEA +W VPI II+ L LT T+ LEPS PL Sbjct: 61 IVLAIKYRASNTKADYLPDWGHSNKVEAFMWGVPIAIIVILGALTAYYTYRLEPSNPLPV 120 Query: 121 --AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 A +EK + + V++DWKW FIYPE GIA++NEI P + V ++TS S +N+F++P+ Sbjct: 121 EVAGEEKLLQVNAVALDWKWLFIYPEYGIASINEIYAPKDRQVLLQLTSESSLNAFWVPK 180 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF--KAIATPDRAAFDQWVA 236 LG+ +YAM M ++LHL+A+E G ++G SA+YSG GFS M+F +++ D F+ WV Sbjct: 181 LGTVLYAMPQMNSKLHLVADEKGIFNGNSANYSGDGFSHMRFHWHSVSLED---FNDWVT 237 Query: 237 KAKQSPNTMSDMAAFEKLAAPSEYN---------QVEYFSNVKPDLFADVINK 280 K + + + D ++ +LA N +V YF+ V+ L+ ++N+ Sbjct: 238 KVRDNGQKL-DRVSYRQLAIAPRMNDIAAKEKDAEVRYFAPVEKRLYYRIVNR 289 >UniRef50_C6CSR8 Quinol oxidase AA3, subunit II n=2 Tax=Paenibacillaceae RepID=C6CSR8_PAESJ Length = 317 Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 125/316 (39%), Positives = 185/316 (58%), Gaps = 15/316 (4%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +RKY + L L + V+LSGC+ +LDPKG IG Q+ LI L I+++P ++ Sbjct: 1 MRKYIRFLVPLMIMLIAVMLSGCSDQYVVLDPKGPIGESQKDLIWITVWLCAIILVPVLI 60 Query: 61 MAVGFAWKYR-ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 + W+YR + A Y PNW HS K+E + W +PI+II LA +T K T+ LEPSKP Sbjct: 61 LTAIIVWRYRDKKDNKAGYQPNWEHSTKLETIWWAIPIIIIAILATVTIKYTYDLEPSKP 120 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 L ++PITIE S+DWKW F YP++GI+TVN + P +TP+ F+VT++ MNSF+IP+L Sbjct: 121 LESAKQPITIEATSLDWKWLFTYPDEGISTVNYLQIPEDTPIRFRVTADQAMNSFWIPQL 180 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G QIYAM+GM L+L A+E G + G+ A+++G F+ M F AT D A + WV K Sbjct: 181 GGQIYAMSGMAMTLYLQADEVGDFLGMGANFTGEQFAKMMFNVKATSD-ADYHAWVDSVK 239 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSA 299 Q+ +++ F++L P Q + FS LF V+ +++ P G + Sbjct: 240 QTSPALTE-EGFKELKLPGSSEQ-QSFSAFPKGLFDQVVMQYVG---------PNGADAP 288 Query: 300 HEGMEGMDMSHAESAH 315 + G + + AE H Sbjct: 289 NSGQKSKPIHDAEGGH 304 >UniRef50_A4YQP6 Cytochrome o ubiquinol oxidase, subunit II n=3 Tax=Bradyrhizobium RepID=A4YQP6_BRASO Length = 277 Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 107/275 (38%), Positives = 164/275 (59%), Gaps = 8/275 (2%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 + DPKG I Q+++++ + +ML +++P + + FAW +R+SN A+Y P++++S V Sbjct: 3 IFDPKGPIAAAQQTILIDSVIIMLAIIVPTSIAVLAFAWWFRSSNGKARYRPDFAYSGAV 62 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 E VVW++P L +I L + W +H L+P+KP+ PI I+ VS+DWKW FIYP+Q +A Sbjct: 63 ELVVWSIPTLTVILLGGVAWIGSHQLDPAKPVDGTGLPIRIQAVSLDWKWLFIYPDQRVA 122 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 TVN + P P+ F++TS SVM +FFIP+LG IY M GM TRL+L + G Y G+++ Sbjct: 123 TVNSLTVPIGAPLQFELTSGSVMTAFFIPQLGGMIYTMNGMVTRLNLRGDHVGIYKGLAS 182 Query: 209 SYSGPGFSGMKF--KAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYF 266 +SG GF M F +A PD F WVA A +S + D A++++LAA S + Sbjct: 183 QFSGDGFPDMMFDTNVVAQPD---FTNWVANAAKSDQVL-DEASYKQLAAQSVEKTPRTY 238 Query: 267 SNVKPDLFADVINKFM--AHGKSMDMTQPEGEHSA 299 P+LF + + + A G + Q E A Sbjct: 239 RLSDPELFGKIAMQHIPPAPGPQLSENQAREESGA 273 >UniRef50_D0DDN4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella sp. SE45 RepID=D0DDN4_9RHOB Length = 319 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 104/283 (36%), Positives = 161/283 (56%), Gaps = 13/283 (4%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNW 82 S L P G + QR G +I ++P ++ W+YR N+ A+Y+P+W Sbjct: 22 SSSRDTFLIPGGPVAAAQRVEFFHIIGWTMIAILPVFVLVPLLLWRYRYRNEKARYTPDW 81 Query: 83 SHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY 142 S +E+++W VP++I+ L+V ++TTH L+P+K LA D P+ ++VV +DWKW FIY Sbjct: 82 ERSPILESLMWGVPLIIVAVLSVQLYRTTHELDPTKTLASDNPPLRVQVVGLDWKWLFIY 141 Query: 143 PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 P+ GIATVN++AFP NT V +T+++VM S I L QIYAM GM+TRLH++A PG Sbjct: 142 PDLGIATVNQLAFPENTSVALDLTTDTVMQSLLISSLAGQIYAMPGMRTRLHILAEAPGV 201 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWV--AKAKQSPNTMSDMAAFEKLAAPSEY 260 ++G + ++G GF KF+AIA + AFD W+ KA +P T A + + +E Sbjct: 202 FEGENTQFNGTGFPAQKFQAIAM-TQEAFDAWIRSVKADGAPLTAEGYARLAQASTGAEA 260 Query: 261 N----------QVEYFSNVKPDLFADVINKFMAHGKSMDMTQP 293 +FS+V+ DLF ++ ++ + QP Sbjct: 261 RAEMGGAGGPVDAIHFSSVEGDLFGAILRRYTSGAAVPPARQP 303 >UniRef50_C8WSR0 Cytochrome c oxidase subunit II n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR0_ALIAD Length = 298 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 110/258 (42%), Positives = 162/258 (62%), Gaps = 6/258 (2%) Query: 22 LSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD-AKYSP 80 + G S++L P G + ++ +I + L +IVV+P I++ W+YR + A+Y P Sbjct: 14 VQGGLSSVLKPAGPVAGQELKIIAGSLILTMIVVVPVIVLFGFILWRYRDKQDNPARYDP 73 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 WS S +E W +PI+II L T K T+AL ++P D KP+TI+V S+DWKW F Sbjct: 74 EWSESKVLEIAWWGIPIVIIGILGAYTAKVTYAL--TRPPVTDVKPMTIDVTSLDWKWLF 131 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YP+QG+ATVNE+ P PV F +T++ MNSF+IP LG Q YAM GM RL L A+ P Sbjct: 132 EYPDQGVATVNELVIPVGVPVAFDLTADGPMNSFWIPSLGGQEYAMPGMVMRLWLEASRP 191 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G Y G +A+++G F+GM+FK +AT RAAF +WV + KQ + ++ + + +L PSE Sbjct: 192 GVYYGHAANFTGQQFAGMQFKVVAT-SRAAFSEWVRQLKQVDHPLT-VTLYSQLRQPSEI 249 Query: 261 NQVEYFSNVKPDLFADVI 278 V+ +S+ DLFA+V+ Sbjct: 250 G-VQLYSSYPRDLFAEVV 266 >UniRef50_C0Z7C6 Quinol oxidase polypeptide II n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7C6_BREBN Length = 331 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 120/315 (38%), Positives = 187/315 (59%), Gaps = 19/315 (6%) Query: 12 WLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 W+ GTVLL+GC S +L+PKG + Q +LI+ + L+ ++++P I + ++Y Sbjct: 13 WILAVLGTVLLTGCGSEYLVLNPKGPVAETQYNLIIISTILVAVIIVPVIALTAFIVYRY 72 Query: 70 RAS-NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE--PSKPLAHDEKP 126 R + A Y P W+HS +E + W +PI+I+ L T + + L+ P+K +A P Sbjct: 73 RDTPGNKASYKPEWAHSTTLEVIWWIIPIVIVALLGYFTVRDVYVLKENPNKEVA----P 128 Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 +TI+V ++DWKW F YPEQ IATVN + PA P+ F+V++++ MNSF++P LG QIYAM Sbjct: 129 MTIQVTALDWKWMFTYPEQNIATVNHLEIPAGVPIRFQVSADAPMNSFWVPELGGQIYAM 188 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 AGM T L+L A+EPGT+ G S+++SG GF+ M+F +A P + FD+WV + K + M+ Sbjct: 189 AGMATELYLQADEPGTFAGFSSNFSGEGFAKMQFDVVAKP-KDEFDKWVKEVKGTTPAMT 247 Query: 247 DMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ-----PEGEHSAHE 301 A +E+L P ++ Y S +F +++ K+ HG MD P G+ S+ E Sbjct: 248 K-ADYEELRKPGVTDKFTY-SAFPEGMFEEIVAKY-GHGHDMDYVMEKNPAPAGDKSSSE 304 Query: 302 GMEGMD-MSHAESAH 315 M M H +H Sbjct: 305 TSLNMQHMQHKTESH 319 >UniRef50_Q1NHQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHQ5_9SPHN Length = 258 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 96/241 (39%), Positives = 137/241 (56%), Gaps = 2/241 (0%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW 93 G + EQ L +++ V P +L+ A+ YR NKD Y PNW S +EA++W Sbjct: 5 GPVAAEQWRLYKIVAVVLIFVAGPVLLLVPLIAYHYRLDNKDDAYRPNWGFSWSLEALIW 64 Query: 94 TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEI 153 PI I+ L VL W TH L+P + L + P+ ++VV++DWKW FIYP+ GIATVN++ Sbjct: 65 LPPIAIVAGLGVLLWDATHQLDPYRALPSKQPPLEVQVVALDWKWLFIYPDDGIATVNQL 124 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 A P PV+ +TS +VM S IP+L QIYAMAGM+T+L+ A+ PG Y G++ ++G Sbjct: 125 AVPVGRPVHLSLTSGTVMQSLLIPQLAGQIYAMAGMRTQLNFAADRPGVYRGLNTQFNGA 184 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDL 273 GF KF +A PDR + W+ + D + L S + +FS V P L Sbjct: 185 GFQHQKFSVVAMPDR-EYRHWLTRRAADGQPFDD-NVLKSLMRKSVAQRPLFFSKVPPGL 242 Query: 274 F 274 F Sbjct: 243 F 243 >UniRef50_C6NXQ9 Cytochrome O ubiquinol oxidase subunit II n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NXQ9_9GAMM Length = 323 Score = 193 bits (490), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 105/275 (38%), Positives = 157/275 (57%), Gaps = 15/275 (5%) Query: 20 VLLSGCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA 76 ++L GC+ + LL P+G I L G+ML+++IP L+A+ W+YR + Sbjct: 21 LMLGGCSRSGLFLLKPEGLISHTFYHYFLLDVGIMLLIIIPTTLLALWAMWRYRKGG-NG 79 Query: 77 KYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP-------LAHDEKPITI 129 Y P WSHS +EAVVW +P++ + L+ L+ K + + P P A P+ + Sbjct: 80 SYHPRWSHSYAIEAVVWGIPLVTVGVLSYLSVKAIYDVNPYNPEVITKAQRAAGGDPVEV 139 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 +V++ DW+W FIYP+Q IA+V+E+ P TPV F++TS SV+N F IP+L I M GM Sbjct: 140 DVIATDWRWLFIYPQQHIASVDELVVPVGTPVRFRLTSTSVVNDFIIPQLVGMIDVMPGM 199 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 +T+ ++A++ GTY G SA YSG G S M F+ A F QWVA AK SP ++ A Sbjct: 200 RTKQAMVADKAGTYVGYSADYSGAGLSWMHFQTKAV-SPTQFTQWVAHAKSSPQRLT-YA 257 Query: 250 AFEKLAAP--SEYNQVEYFSNVKPDLFADVINKFM 282 F + A P + + F +V+P LF V+ + M Sbjct: 258 GFNRFARPYIAVGGDQQIFGHVQPGLFDHVVMEVM 292 >UniRef50_Q0AI63 Cytochrome c oxidase, subunit II n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AI63_NITEC Length = 333 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 107/286 (37%), Positives = 150/286 (52%), Gaps = 21/286 (7%) Query: 16 FAGTVLLSGCNSA----LLDPKGQIGLEQ-RSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 + +LLSGCNSA L+P+G I Q L L +++ +P + AW YR Sbjct: 32 YVALLLLSGCNSAEHLSFLNPQGPIATAQSEHFWLVVAILFILIALPVFIGTAWIAWHYR 91 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIE 130 +KY P W +E W +PI I++FL+VL W+ T +P LA + ++ Sbjct: 92 YGATKSKYVPRWEIFKPLEYFSWGIPIAIVLFLSVLVWEDTERFDPYHTLASSKPATHVQ 151 Query: 131 VVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 V+ DWKW F+YPE GIA+V +AFPA P+ ++TS +VM SFFIP LGSQIYAM GM Sbjct: 152 VIGYDWKWLFVYPEHGIASVGMLAFPAEQPLTMELTSATVMQSFFIPALGSQIYAMGGMV 211 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 T+L+L A+ PG + G + YSG GF KF A+A FD WV + + + D AA Sbjct: 212 TQLNLQADRPGHFLGENTMYSGDGFHQQKFVAVAM-TLTDFDAWVQQVRAT-GIPFDAAA 269 Query: 251 FEKLAAPSEYNQVE--------------YFSNVKPDLFADVINKFM 282 +A Q+ YF+ VK + F D++ M Sbjct: 270 LNAIATQGTKAQLSTALAPAAPTFDGNVYFTGVKANFFTDLVISVM 315 >UniRef50_B5ENJ7 COX aromatic rich domain protein n=4 Tax=Acidithiobacillus RepID=B5ENJ7_ACIF5 Length = 321 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 104/280 (37%), Positives = 158/280 (56%), Gaps = 13/280 (4%) Query: 14 SLFAGTVLLSGCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 ++ A +LLSGC + DPKG + +L G+M +V L+ + F W+Y+ Sbjct: 16 AVLAPILLLSGCAGNPFWIFDPKGLMADTNLFYLLVDVGIMGSIVGLTALLVIWFMWRYQ 75 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP------LAHDE 124 KY P WSHSN +E VVW +PI+ + FL+ T L P P L Sbjct: 76 KGKNRGKYDPTWSHSNTIEVVVWGIPIIAVGFLSYFAVTGTFELNPYNPTVITNHLKPVS 135 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 P+ ++V++ DW+W F+YP+ +A NE+ PA+TPV+F++TS++V +FFIP+L I Sbjct: 136 DPVEVDVIATDWQWLFVYPQYHMAAANELVLPAHTPVFFRLTSSAVTTTFFIPQLVGMID 195 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 M GM+T+ L +N G Y GI++ Y+G G S M FK A F +WV K +QSP + Sbjct: 196 VMPGMRTKNALESNHVGEYQGIASDYAGAGTSWMTFKTRIV-KSADFREWVRKVQQSPTS 254 Query: 245 MSDMAAFEKLAAP--SEYNQVEYFSNVKPDLFADVINKFM 282 M+ A+F A P + +++V YFS+V LF V+++ M Sbjct: 255 MT-YASFNDYADPYINVHHKVAYFSSVPDGLFDHVVDEVM 293 >UniRef50_B9NVN8 CytOchrome o ubiquinol oxidase, subunit II n=2 Tax=Rhodobacteraceae RepID=B9NVN8_9RHOB Length = 352 Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 162/289 (56%), Gaps = 21/289 (7%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA-SNKDAKYSPN 81 +G + + LDP+G I Q++ +L A L+LI VIP +++ A +YR A Y P+ Sbjct: 59 AGASDSFLDPQGPIAAVQKTHLLRATALILIAVIPVLILVPVIALRYRRRKGGTAAYRPH 118 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI 141 W S +E ++W VP++I+ L+ WK TH L+P +E + ++VV +DWKW FI Sbjct: 119 WDFSGGLEVLMWGVPVVIVAILSFYLWKATHRLDPYTAPFGEEPALRVQVVGLDWKWLFI 178 Query: 142 YPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 YP+ GIA+V E+ P V +T+++VM SF IP L QIYAM GM T+LH++A+ P Sbjct: 179 YPDLGIASVGELGIPVKQQVAMTLTTDTVMQSFMIPALAGQIYAMPGMTTQLHVVADTPE 238 Query: 202 TYDGISASYSGPGFSGMKFKAIA--TPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 T G + Y+G GF+ KF+ +A T D F+ WV K Q+ + D ++ LA S+ Sbjct: 239 TMQGENTQYNGRGFTKQKFQTLAMQTDD---FNAWVEKV-QANGILLDPVTYQTLAMRSD 294 Query: 260 YNQVE-------------YFSNVKPDLFADVINKFMAHGKSMDMTQPEG 295 ++V+ YF DLF +++++ + GK + + Q G Sbjct: 295 RDEVQAELGTAQMPEGALYFKLDDGDLFHSILHRYHS-GKPLPLDQQPG 342 >UniRef50_C1PAT6 Quinol oxidase AA3, subunit II n=1 Tax=Bacillus coagulans 36D1 RepID=C1PAT6_BACCO Length = 308 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/297 (37%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 24 GCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 GC++ A+LDP+G + EQ LI+ + LM V + + + + KYRAS A Y P Sbjct: 23 GCDTKIAVLDPQGPMAREQYHLIVYSSILMAFVFVVVLGLYLYMVIKYRASRLPADYKPP 82 Query: 82 WSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 H +KV VWT +P+L+II +A+ T K +++E + +EKP+T+ V S +WKW F Sbjct: 83 QIHGHKVLETVWTAIPVLLIIAIAIPTVKANYSVEETPKSMKNEKPLTVYVTSSEWKWIF 142 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPEQGI TVN + PA P+ F++TS+ M SF+IP LG Q Y M M RL L A+ P Sbjct: 143 SYPEQGIETVNYVNIPAGRPINFELTSSGTMASFWIPELGGQKYTMPNMTMRLILAADHP 202 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G Y G +A+++G GF+ M F +A + F+ WV + K M + +EKL Sbjct: 203 GEYTGRNANFNGEGFAKMDFDVLAQTPK-DFNAWVKEVKSRAPQMKK-SDYEKLIKKEGL 260 Query: 261 NQVEYFSNV-----KPDLFADVINKFMAHGKSMDMTQPEGE---HSAHEGMEGMDMS 309 + ++ KPD KS +GE H H M GMDMS Sbjct: 261 VGRQTYTGTHLKWDKPD-----------EQKSYYEESEKGEKQNHHHHHDMSGMDMS 306 >UniRef50_Q725F6 Quinol oxidase AA3, subunit II n=17 Tax=Listeria RepID=Q725F6_LISMF Length = 368 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 142/250 (56%), Gaps = 7/250 (2%) Query: 19 TVLLSGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAK 77 T L+SGC +L+PKG + Q LI+ + ML++V+ ++ KYR + Sbjct: 17 TGLISGCGDLTVLNPKGPVAKGQSDLIIYSIIFMLVIVLTIFVLFTIMLVKYRERKDISN 76 Query: 78 YSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 Y P+ S K+E + WT +P+ I+I LA+ T KT +A E + + + PI I S DW Sbjct: 77 YEPDMHGSKKLE-IFWTLIPVAIVIALAIPTVKTIYAGEEAPKVTSHKDPIVIYATSADW 135 Query: 137 KWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 KW F YP++ I TVN + P + PV FK+TS M SF++P+LG Q YAM+GM L+L Sbjct: 136 KWIFSYPDESIETVNYVNIPTDRPVLFKLTSADTMTSFWVPQLGGQKYAMSGMTMNLYLQ 195 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK-QSPNTMSDMAAFEKLA 255 A+E GTY G +A+++G GF+ +F +A ++ F +W + K SP D+ +++L Sbjct: 196 ADEVGTYKGRNANFNGEGFADQRFDVVAQSEK-DFKKWAKETKASSPVITQDI--YDRLL 252 Query: 256 APSEYNQVEY 265 P + Y Sbjct: 253 IPGSSKKKTY 262 >UniRef50_A5FXH9 Cytochrome c oxidase, subunit II n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FXH9_ACICJ Length = 334 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 95/268 (35%), Positives = 149/268 (55%), Gaps = 15/268 (5%) Query: 24 GCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 GC+ + DPKG + + + +M +++P + W+YR S + A YSP Sbjct: 30 GCSGGPFRVFDPKGPVARASLNFTIIDVVVMAFIIVPTACFILWCIWRYRRS-RAAAYSP 88 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP-------LAHDEKPITIEVVS 133 +SHS K+EAV+W +PI+++ LA ++ T A++P P A P+ I+VV+ Sbjct: 89 GFSHSLKLEAVMWGIPIVVVAGLAYASYNGTFAVDPYGPHVLRMPARAGRSHPLKIDVVA 148 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 DW+W FIYP+Q +A+V+ + PA V F++TS SV+N FFIP+L I M GM+T+ Sbjct: 149 TDWQWLFIYPKQHVASVDRLVVPAGRNVEFRLTSTSVVNDFFIPQLTDMIDVMPGMRTKD 208 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 + AN G Y+G +A++SG GFS M+F R F ++V A +P ++ A FE+ Sbjct: 209 AMRANGQGRYEGFAANFSGAGFSWMRFATDVVGKR-GFAKFVRHAAAAPAALT-YATFER 266 Query: 254 LAAPSEY--NQVEYFSNVKPDLFADVIN 279 A P+ + YFS P LF ++ Sbjct: 267 FARPTINLDQRPRYFSAPAPHLFRRIVE 294 >UniRef50_Q4L565 Probable quinol oxidase subunit 2 n=63 Tax=Bacillales RepID=QOX2_STAHJ Length = 374 Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 97/256 (37%), Positives = 146/256 (57%), Gaps = 8/256 (3%) Query: 13 LSLFAGTVLLSGC-NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA 71 L +F +LLSGC N + + KG + Q+ LI+ + ML++V + M F +KY + Sbjct: 8 LLMFGTLILLSGCSNVEVFNAKGPVASSQKFLIIYSIIFMLVIVAVVLTMFAIFIFKY-S 66 Query: 72 SNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 NK+++ + H++ +E + + VPI+I+I L++ T KT + E KP E P+ + Sbjct: 67 YNKNSE-TGKMHHNSLIETIWFVVPIIIVIALSIPTVKTLYDYE--KPPESKEDPMVVYA 123 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 VS +KWFF YPEQ + TVN + P N PV FK+ + M SF+IP+LG Q YAM GM Sbjct: 124 VSAGYKWFFAYPEQKVETVNTLTIPKNRPVVFKLQAMDTMTSFWIPQLGGQKYAMTGMTM 183 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 L A+E GT+ G +++++G GFS FK + + D++ FD WV AK D F Sbjct: 184 NWTLQADETGTFRGRNSNFNGEGFSRQTFK-VHSVDQSEFDSWVKDAKSKKTLSQD--EF 240 Query: 252 EKLAAPSEYNQVEYFS 267 +K PS N+ FS Sbjct: 241 DKQLLPSTPNKELTFS 256 >UniRef50_P34957 Quinol oxidase subunit 2 n=10 Tax=Bacillales RepID=QOX2_BACSU Length = 321 Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 93/268 (34%), Positives = 149/268 (55%), Gaps = 16/268 (5%) Query: 24 GC-NSALLDPKGQIGLEQRSLILTAFGLMLIVV--IPAILMAVGFAWKYRASNKDAKYSP 80 GC N+++LDPKG + +Q LIL + G ML +V + + + ++ R + Y+P Sbjct: 25 GCSNASVLDPKGPVAEQQSDLILLSIGFMLFIVGVVFVLFTIILVKYRDRKGKDNGSYNP 84 Query: 81 NWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 H N VVWTV PILI+I L+V T +T ++LE + D++P+ + S+DWKW Sbjct: 85 EI-HGNTFLEVVWTVIPILIVIALSVPTVQTIYSLEKAPEATKDKEPLVVYATSVDWKWV 143 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 F YPEQ I TVN + P + P+ FK++S M S +IP+LG Q YAMAGM +L A++ Sbjct: 144 FSYPEQDIETVNYLNIPVDRPILFKISSADSMASLWIPQLGGQKYAMAGMLMDQYLQADK 203 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 GTY+G +A+++G F+ +F A ++ F+ WV K + ++ + Sbjct: 204 VGTYEGRNANFTGEHFADQEFDVNAVTEK-DFNSWVKKTQNEAPKLT----------KEK 252 Query: 260 YNQVEYFSNVKPDLFADVINKFMAHGKS 287 Y+++ NV F+ K++ HG+ Sbjct: 253 YDELMLPENVDELTFSSTHLKYVDHGQD 280 >UniRef50_Q81HT3 Quinol oxidase subunit 2 n=80 Tax=Bacillaceae RepID=QOX2_BACCR Length = 291 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 90/238 (37%), Positives = 142/238 (59%), Gaps = 7/238 (2%) Query: 24 GCNS--ALLDPKGQIGLEQRSLILTAFGLM-LIVVIPAILMAVGFAWKYRASNKDAKYSP 80 GC+ A+L+P+G + Q LI+ +F LM LI+ I IL V +YR ++ Y P Sbjct: 24 GCDKKLAVLNPQGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILI-RYREKPENMDYEP 82 Query: 81 NWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 H N + ++WT VP++I+I L++ T K T+A E + KP+ I V S +WKW Sbjct: 83 PEQHGNTLLEIIWTLVPVIIVIALSIPTVKATYASEEVPKESKHIKPVEIYVTSANWKWL 142 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 F YPE+ I TVN + PA P+ FK+TS MN+F++P LG Y M GM L+L A++ Sbjct: 143 FSYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIMDLYLQADK 202 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAP 257 PG+Y G SA++SG GF+ M+F+ A + +D+WV + +++ +++ A + ++ P Sbjct: 203 PGSYLGRSANFSGEGFTHMEFEVEAK-TKEKYDKWVKEVQETAPKLTE-AKYNEIVKP 258 >UniRef50_A0R9Y2 Quinol oxidase, subunit 2 (Cytochrome c oxidase, subunit II) n=3 Tax=Bacillus cereus group RepID=A0R9Y2_BACAH Length = 337 Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 88/228 (38%), Positives = 137/228 (60%), Gaps = 6/228 (2%) Query: 24 GCNS--ALLDPKGQIGLEQRSLILTAFGLM-LIVVIPAILMAVGFAWKYRASNKDAKYSP 80 GC+ A+L+P+G + Q LI+ +F LM LI+ I IL V +YR ++ Y P Sbjct: 70 GCDKKLAVLNPQGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILI-RYREKPENMDYEP 128 Query: 81 NWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 H N + ++WT VP++I+I L++ T K T+A E + KP+ I V S +WKW Sbjct: 129 PEQHGNTLLEIIWTLVPVIIVIALSIPTVKATYASEEVPKESKHIKPVEIYVTSANWKWL 188 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 F YPE+ I TVN + PA P+ FK+TS MN+F++P LG Y M GM L+L A++ Sbjct: 189 FSYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIMDLYLQADK 248 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD 247 PG+Y G SA++SG GF+ M+F+ + + +D+WV + +Q+ +++ Sbjct: 249 PGSYLGRSANFSGEGFTHMEFE-VEAKTKEKYDKWVKEVQQTAPKLTE 295 >UniRef50_B7DNN6 Cytochrome c oxidase subunit II n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNN6_9BACL Length = 311 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/257 (35%), Positives = 145/257 (56%), Gaps = 6/257 (2%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS-NKDAKYSPN 81 G N +L P G E LI+ + L+L+V++P + + W+YR + A Y+P Sbjct: 23 CGQNVLVLHPAGPAAREIDRLIILSVILLLVVIVPVFALTIYIVWRYRDKPDNRAPYTPQ 82 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI 141 W+ S +E + W++P++I+ L T KTT AL ++P + +T++VVS+DWKW F+ Sbjct: 83 WTESRALEWIWWSIPMVIVGVLGAYTAKTTFAL--TRPPESNGNVVTVDVVSLDWKWLFL 140 Query: 142 YPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 YP+Q +ATVN P PV F +TS++ +NSF++P+L Q Y M GM RL + A++PG Sbjct: 141 YPDQHVATVNYCVIPTGVPVQFVLTSDAPINSFWVPQLAGQEYTMPGMALRLWVQADQPG 200 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYN 261 Y G A+++G GF+ M F A + +AF W +Q +++ A ++ L P Sbjct: 201 NYYGHGANFTGKGFAEMSFTVQARSE-SAFRLWAQGLEQHAPALTE-AGYQLLKKPGVTG 258 Query: 262 QVEYFSNVKPDLFADVI 278 ++ Y N LF V+ Sbjct: 259 RLSY-GNFPKGLFDQVV 274 >UniRef50_B1HVF0 Quinol oxidase subunit 2 n=6 Tax=Bacillaceae RepID=B1HVF0_LYSSC Length = 301 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/303 (34%), Positives = 167/303 (55%), Gaps = 26/303 (8%) Query: 21 LLSGCNS-ALLDPKG-QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY 78 LLSGC + +PKG ++IL+ + I+++ +L+A KYRAS A Y Sbjct: 17 LLSGCEPLTVFNPKGPNAETLSNTIILSIITMAFILLVVYVLLAFMLT-KYRASKTAADY 75 Query: 79 SPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEK-PITIEVVSMDW 136 P + + + WTV PI+I+ FLAV+T +TT +E ++P +D+K P+ I S +W Sbjct: 76 EPPHEEGSHLLEITWTVIPIIIVAFLAVVTVRTTSTVE-AQPAGYDDKEPLVIYASSSNW 134 Query: 137 KWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 KW F YPE+G+ TVN + P + P+ FK+ S + SF+IP+L Q YAM+ M T +HL Sbjct: 135 KWHFSYPEEGVETVNYVNIPVDRPIEFKLYSFGPITSFWIPQLAGQKYAMSDMLTTIHLA 194 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 A+E G++ G +++++G GF+ M+F+A + + FD+WVA D+ A EK Sbjct: 195 ADEVGSFMGRNSNFNGRGFAEMEFEAQSM-TQEDFDKWVA----------DVKAKEKPLT 243 Query: 257 PSEYNQVEYFSNVKPDLFADVINKF----MAHGKSMDMTQPEGEHSAHEGMEGMDMSHAE 312 +++++ +V F+ +F M HGK+M M + H M DM++ Sbjct: 244 EEKFDELLKAEHVGRQSFSSTHLEFSPAPMEHGKNMKMGDMD-----HGDMSEEDMNNEH 298 Query: 313 SAH 315 S H Sbjct: 299 SGH 301 >UniRef50_C6IYM5 Quinol oxidase subunit II n=2 Tax=Bacillales RepID=C6IYM5_9BACL Length = 318 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 160/299 (53%), Gaps = 9/299 (3%) Query: 23 SGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 +GCN +LDPKG + Q +I+ + M +++ + + KYRAS Y P Sbjct: 19 TGCNQLTVLDPKGPVAKTQSQVIIFSIVTMAFILLVVYTLYIYMLTKYRASKAAPDYEPP 78 Query: 82 WSHSNK-VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 +K +E T+PI+I+ L+V+T ++T A+E D+KP+ I S +WKW F Sbjct: 79 HVEGSKWLEITWITIPIIIVAVLSVVTVRSTSAVEKVPKGYEDQKPLVIYAASSNWKWHF 138 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPE+GI TVN + FP N PV F++ S + SF+IP+L Q YAM+ M L+++A Sbjct: 139 SYPEEGIETVNYVNFPTNRPVEFRLYSYGPITSFWIPQLAGQKYAMSDMVNTLNIVAEHE 198 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G+Y G ++++SG GF+ M+F+A+A + +D+WV + K + +++ + F+KL + Sbjct: 199 GSYMGKNSNFSGEGFAHMEFEALAMAP-SEYDKWVKEVKDTAPELTE-SEFDKLLETAHV 256 Query: 261 NQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSA--HEGME--GMDMSHAESAH 315 + Y S+ D + H + E +HS H M+ MDM+ S H Sbjct: 257 GRQTY-SSTHLDFRPAPEGENAGHNHGGENGSEEMDHSTMDHSTMDHSDMDMTEESSGH 314 >UniRef50_C8WTG4 Cytochrome c oxidase subunit 2 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTG4_ALIAD Length = 279 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 96/250 (38%), Positives = 135/250 (54%), Gaps = 12/250 (4%) Query: 11 GWLSLFAGTVL-LSGCNSA----LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 G ++L TVL L+GC+S +L P+G + + LI+ +F LML+VV+ ++ Sbjct: 10 GLIALIGFTVLALTGCDSPTYWPVLSPQGPVARSEYYLIIYSFILMLLVVLAVFILFFWV 69 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHAL-EPSKPLAHD 123 KYRA +A Y P N +WTV PIL++I LA+ T T+ L P K A Sbjct: 70 IIKYRARPDNADYVPPEIEGNAKLETLWTVIPILVVIALAIPTVAVTYKLVYPPKVEAAT 129 Query: 124 EK----PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 K ITI+V+S WKW F YP Q I TVN + PA PV F++TS+ MN+F++P L Sbjct: 130 AKIVGKSITIDVISEQWKWVFKYPAQNIETVNYVNIPAGVPVDFELTSSGPMNTFWVPAL 189 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G + M M +L L A+ PG+Y G A YSG GF+ M F A F+ WV + Sbjct: 190 GGMEFTMPNMNLKLWLEADHPGSYLGRGAQYSGRGFAHMTFTVNAL-SPTDFENWVKSVQ 248 Query: 240 QSPNTMSDMA 249 Q+ ++ A Sbjct: 249 QTAPKLTKQA 258 >UniRef50_A3K373 Cytochrome o ubiquinol oxidase, subunit II n=1 Tax=Sagittula stellata E-37 RepID=A3K373_9RHOB Length = 332 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/232 (34%), Positives = 127/232 (54%), Gaps = 8/232 (3%) Query: 15 LFAGTVLLSGCNSA----LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 LF +L++ + A L P G I +Q + L A + L+ V+PA+++ ++YR Sbjct: 4 LFVAGLLIASPDRANAADLFSPIGPIMQDQSAHFLRAALIALVAVLPAMILLPIMLFRYR 63 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIE 130 A+Y+P+W + EA +W VP+L+I LA + T L+P +PL D P+ I+ Sbjct: 64 IGGS-ARYTPDWEFNKWFEAAIWGVPVLVICVLAFWLAQATLKLDPYQPLGDD--PLEID 120 Query: 131 VVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 +V D+++ IYP+Q +A ++EI P PV F++T+++VM SF QIYAM GM Sbjct: 121 LVGTDFRYLAIYPDQQVAALDEIVIPTGRPVTFRLTTDTVMQSFLPNGFAGQIYAMPGMI 180 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 T+L+L AN G ++G GF+ M+ A A FD WV A +P Sbjct: 181 TKLNLAANREGEGLATQTQFNGYGFANMRVPMRAV-SAAQFDAWVDGATGAP 231 >UniRef50_Q05FH0 Cytochrome O ubiquinol oxidase subunit II n=1 Tax=Candidatus Carsonella ruddii PV RepID=Q05FH0_CARRP Length = 252 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 115/206 (55%), Gaps = 2/206 (0%) Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVS 133 K + PN +SN +E +VW +P II FL++ T K++ L P + + KP+ IE+VS Sbjct: 45 KKQIFLPNLINSNCLEILVWFLPTSIIFFLSIYTIKSSIYLNPLNNIYKNIKPLIIEIVS 104 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 +WKW IYP+Q I +NEI P P+ + SNS+MN+ IP++G Q+Y M+ + L Sbjct: 105 TNWKWIIIYPKQKILLLNEICIPLLIPIKMLIISNSLMNTICIPKIGLQMYCMSNYKKSL 164 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 +LIA + G G+S++++G G+S MK + + + F W+ K+ ++ + Sbjct: 165 NLIAIKHGIMHGLSSNFNGIGYSHMKI-CLFSLIKKNFFYWLINIKKKK-IFYNIKNYNF 222 Query: 254 LAAPSEYNQVEYFSNVKPDLFADVIN 279 + S + ++FS LF ++N Sbjct: 223 ITKQSYIDNSKFFSIYNNKLFFLILN 248 >UniRef50_Q67ML2 Cytochrome c oxidase subunit 2 n=1 Tax=Symbiobacterium thermophilum RepID=Q67ML2_SYMTH Length = 342 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 126/246 (51%), Gaps = 18/246 (7%) Query: 14 SLFAGTVLLSGCNS---ALLDPKGQIGLEQRSLIL-TAFGLMLI-VVIPAILMAVGFAWK 68 ++ +VLL+GC++ LDPKG + Q L+L T + M I + + A L+ V F ++ Sbjct: 15 AILLASVLLAGCSTLPQTPLDPKGPVAQMQTGLLLYTLYIAMGIGISVTAALLYVVFRFR 74 Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 R P N V ++WTV P+LI++ +A T A + P E + Sbjct: 75 ARPGLTGV---PVQIRGNHVLEIIWTVIPVLILVSVAFPT--VEAAFSTAVP---PEGAM 126 Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 T+ W + F YPE GI T NE+ PA P+ ++TSN V++SF++P+L + + Sbjct: 127 TVRATGYRWWFAFEYPELGIVTANELRIPAGQPIRLELTSNDVIHSFWVPKLAGKTDMIP 186 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK---QSPNT 244 G + A+EPG Y G A + G + M+F+ A P FD+WV + + Q P+ Sbjct: 187 GRVNIAWIQADEPGVYLGQCAEFCGDSHANMRFQVRAMPPE-QFDEWVRQRQAMAQGPSE 245 Query: 245 MSDMAA 250 +S +AA Sbjct: 246 LSAVAA 251 >UniRef50_Q5SLI2 Cytochrome c oxidase subunit 2 n=4 Tax=Thermus RepID=Q5SLI2_THET8 Length = 337 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/244 (30%), Positives = 117/244 (47%), Gaps = 12/244 (4%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI--LTAFGLMLIVVIPAILMAVG 64 +S L L+ ++ A+ P G E L + F ++ +V+ L V Sbjct: 2 QRSFAALGLWGLSLAQEAHRVAITHPGGSFNQEVAFLFPWVYFFSFLIFLVVAGSLAYV- 60 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHD 123 WK+RA +D + P H N VVWT +P+ I+ L LT K ++ ++P+ Sbjct: 61 -TWKFRARPEDQEEPPQ-IHGNDRLEVVWTLIPLAIVFVLFGLTAKAL--IQVNRPIPGA 116 Query: 124 EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQI 183 K +EV + W F YPE G+ NE+ PA PV ++TS V++SF++P L + Sbjct: 117 MK---VEVTGYQFWWDFHYPELGLRNSNELVLPAGVPVELEITSKDVIHSFWVPGLAGKR 173 Query: 184 YAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPN 243 A+ G TR+ EPG Y G A G + M F+ + P + FD++V AK SP Sbjct: 174 DAIPGQTTRISFEPKEPGLYYGFCAELCGASHARMLFRVVVLP-KEEFDRFVEAAKASPA 232 Query: 244 TMSD 247 ++D Sbjct: 233 PVAD 236 >UniRef50_B1YIW4 Cytochrome c oxidase subunit 2 n=2 Tax=Exiguobacterium RepID=B1YIW4_EXIS2 Length = 343 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 9/226 (3%) Query: 20 VLLSGC---NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA 76 +LLSGC + L P+G+ Q +I + +ML V+ ++ + K+R D Sbjct: 21 LLLSGCGIPELSALQPRGEGAQMQLEIIKLSLWVMLFVLAIVAVIYIYVLMKFRRKAGDN 80 Query: 77 KYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMD 135 P N ++WTV PIL+++ LAV T KTT L +K +E I V + Sbjct: 81 TV-PKQVEGNHTLEIIWTVIPILLLVVLAVPTIKTTVELADAKEAKKNE---VINVTANL 136 Query: 136 WKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 + W F YP++G++T E+ P V +TS V++SF++P L + G+ + L Sbjct: 137 YWWEFEYPDKGVSTGQELVIPVGKRVAVNLTSKDVIHSFWVPALSGKTDTNPGLDNEMWL 196 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 A E GTY G A GP + M FK IA ++ +D W+ K + Sbjct: 197 QAQEAGTYYGKCAELCGPSHALMDFKVIAL-EQDDYDAWLKDMKSA 241 >UniRef50_Q04441 Cytochrome c oxidase subunit 2 n=5 Tax=Bacillus RepID=COX2_BACPF Length = 342 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 14/242 (5%) Query: 19 TVLLSGC----NSALLDPKG-QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 T+ L+GC N LDPKG Q ++IL+ + L+ ++ + + A KYR Sbjct: 17 TLFLTGCLGEENLTALDPKGPQAQWIYDNMILSIIVMALVSIVVFAIFFIILA-KYRRKP 75 Query: 74 KDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAH-DEKPITIEV 131 D + P H N + WTV PI++++ LAV T T P + + I+V Sbjct: 76 GDDEI-PKQVHGNTALEITWTVIPIILLVILAVPTITGTFMFADKDPDPEVGDNTVYIKV 134 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 + W F Y +G ++ P V F++ + V++SF++P LG +I + G+ Sbjct: 135 TGHQFWWQFDYENEGFTAGQDVYIPVGEKVIFELHAQDVLHSFWVPALGGKIDTVPGITN 194 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV----AKAKQSPNTMSD 247 + L A+EPG + G A GP + M FK IA +R +D WV A+ ++ T+++ Sbjct: 195 HMWLEADEPGVFKGKCAELCGPSHALMDFKLIAL-ERDEYDAWVEGMSAEVEEPTETLAN 253 Query: 248 MA 249 Sbjct: 254 QG 255 >UniRef50_C0Z582 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillales RepID=C0Z582_BREBN Length = 342 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 14/234 (5%) Query: 13 LSLFAGTVL-LSGCNS---ALLDPKGQIGLEQRSLILTAFGLML--IVVIPAILMAVGFA 66 SLFA L L+GC + L P G + Q L+ + +M+ +V+ AI V Sbjct: 11 FSLFALLALVLTGCGKDELSALKPSGPVAAMQFDLMKLSSAIMIGVFIVVMAIFTYVLIR 70 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 ++ R + P N ++WTV P L++I +A+ T T AL P E+ Sbjct: 71 YRKRPGQQGI---PKQVEGNHALEILWTVIPFLLLIIMAIPTVTTGFALHKEYP---KEE 124 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 + ++V + + W F YP+ G+A+ ++ P V F ++++ V ++F+IP LG +I Sbjct: 125 AVQVKVTAHQFWWEFEYPDLGVASAQDLVLPVGKKVQFVLSASDVKHAFWIPALGGKIDT 184 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G + ++ L A++ G Y G A G + M FK + ++A FD WVA K Sbjct: 185 NPGQENKMWLQADKAGIYYGKCAELCGASHALMDFK-VEVKEQADFDTWVANMK 237 >UniRef50_D2RSI3 Cytochrome c oxidase, subunit II n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RSI3_9EURY Length = 256 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 107/238 (44%), Gaps = 34/238 (14%) Query: 18 GTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAK 77 GTV N L+D GLE + L+ A L L V++ I AV F N D Sbjct: 23 GTVAAQSPNRELID-----GLEYQ-LLYAALPLTLFVLMILIYAAVKFH-----DNDD-- 69 Query: 78 YSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHA---LEPSKPLAHDEK--------- 125 P + + + WT II+ L+ + + PS+ L D + Sbjct: 70 --PQPTTEDPSLEITWTAATAIILLFVGLSGYSVLVNPYISPSQALDTDNQSQEGFDSFE 127 Query: 126 --PIT----IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 P T + V W+W YPE + T N+I PAN V F +TS+ V++S F+P L Sbjct: 128 DLPDTGDEEVHVRGYQWEWQATYPEANVTTENQIVIPANEDVTFWLTSDDVIHSLFVPDL 187 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 G + A G TR I +EPG YD + A + G G S M+ + + D +DQW+++ Sbjct: 188 GVKQDAFPGDYTRARTIVDEPGRYDVVCAEFCGAGHSRMQGEIVVV-DSETYDQWLSE 244 >UniRef50_Q5P900 Chain II protein of putative cytochrome c oxidase n=2 Tax=Proteobacteria RepID=Q5P900_AZOSE Length = 279 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 15/221 (6%) Query: 22 LSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 L+ C ++LDP G R + L + ++++ + +L+ V AW + +S Sbjct: 25 LAACEGPQSILDPAGP---AARDVTLLWWPMLIVATL--VLVGVTVAWIVAMLRRPRDFS 79 Query: 80 PNWSHSNKVEAVV---WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 PN + VV +P I+ L + P + DE P+ I+V W Sbjct: 80 PNEAKRISRRWVVNGGILLPTASIVLLLGFGVPAADRMLPRR----DEAPLRIDVTGRQW 135 Query: 137 KWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 +W YP G V+E+ PA PV+ VTS V++SF++PRLG +I A+ G L L Sbjct: 136 QWDVAYPGGGAVLVDELHLPAGRPVHLHVTSADVIHSFWVPRLGPKIDAVPGRTNVLRLQ 195 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 A+E G+ G + + G G + M K + A F W+A+ Sbjct: 196 ADEAGSLRGQCSEFCGTGHAHMVLK-VQVHSEADFSAWLAE 235 >UniRef50_A7NPW1 Cytochrome c oxidase subunit 2 n=2 Tax=Roseiflexus RepID=A7NPW1_ROSCS Length = 370 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 17/264 (6%) Query: 31 DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEA 90 DP G L++ + + L V + + V W++R A P+ H N Sbjct: 36 DPYGDNARRIYELLIPIWWMALGVFVVVEGLLVYAIWRFRRRPGSAAM-PSQVHGNTQVE 94 Query: 91 VVWTV-PILIIIFLAVLTWKT--THALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG- 146 ++WT+ P +I++ +AVLT++T +A+ P E + I+ + W + F YP+ G Sbjct: 95 ILWTIAPAIIVLVIAVLTFRTQAANAIMP-------EDALRIKAIGHQWWFEFQYPDAGA 147 Query: 147 ----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 + T +++ P PV + S V+++F++P+L + Y + G L A +PG Sbjct: 148 DGKPVVTASDMYIPVGRPVTVVLESQDVIHNFWVPKLAGKTYMIPGKTNFLTFTAEQPGI 207 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQ 262 Y + A + G + M+F+ IA D + F++W+ + K P+ + L + Q Sbjct: 208 YRAVCAEFCGEAHALMRFRVIAV-DESEFNRWIEQKKTPPSAPAGTLTVNGLTGDATRGQ 266 Query: 263 VEYFSNVKPDLFADVINKFMAHGK 286 + K + + A G+ Sbjct: 267 AIFLDARKQCIACHAVEGTNARGQ 290 >UniRef50_Q8ER77 Cytochrome c oxidase subunit 2 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ER77_OCEIH Length = 350 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 10/237 (4%) Query: 8 KSLGWLSLFAGTVLLSGC---NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 KS + + A +L++GC N LDPKG LIL +M+ V I + + V Sbjct: 7 KSKVFFLISAMALLMAGCGRENLTALDPKGYGADRAMDLILLTTFIMIGVFIIVMAIYVI 66 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHD 123 ++R Y P N V+WTV PI++++ +AV T T L ++ Sbjct: 67 TLVRFRKKKGQEDYIPEQVEGNHKLEVIWTVIPIILVLVIAVPTVLGTFDLADD---SNA 123 Query: 124 EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQI 183 ++ + IEV + W F Y + + T ++ P VY + S+ V +SF+IP + ++ Sbjct: 124 DEHVNIEVTGNQYWWHFNYAGEEVVTSQDLYIPTGERVYLNMLSSDVTHSFWIPSISGKM 183 Query: 184 YAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQWVAKAK 239 +++ A+E G Y G A GP S M FK IA +P+ ++QWVA + Sbjct: 184 DVNPENVNTMYIEAHEEGVYWGKCAELCGPSHSLMDFKVIAVSPEE--YEQWVADMQ 238 >UniRef50_Q2IK63 Cytochrome c oxidase, subunit II n=3 Tax=Anaeromyxobacter RepID=Q2IK63_ANADE Length = 337 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 16/235 (6%) Query: 21 LLSGCNSALLDPKGQI---GLEQRSLIL---TAFGLMLIVVIPAILMAVGFAWKYRASNK 74 LL+G L + G++Q L+L +AF L LI IL+ + F +YR Sbjct: 11 LLAGAGPGYLPARASSVAEGVDQVFLLLFWVSAFFLALI-----ILLTIVFVLRYRRRAT 65 Query: 75 DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 P+ +HS ++E + +P+ +++ L V++ +T + + P P+ ++V Sbjct: 66 RLHPEPSPAHSTRLELLWSVIPLALVMALFVMSTRTWIQMTSADP---GGDPVRVQVTGR 122 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 W W+F +P A NE+ A PV +++ V++S ++P + A+ G TRL Sbjct: 123 KWSWWFDHPSGKGA--NELHVVAGRPVELILSATDVIHSLYVPEFRLKQDAVPGRFTRLT 180 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 PG+Y + A Y G S M + D+A+FD W + + T++D+ Sbjct: 181 FTPTVPGSYPILCAEYCGTDHSRMLSTVVVHADQASFDAWSKEGLPADATLADLG 235 >UniRef50_C6D2I7 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillales RepID=C6D2I7_PAESJ Length = 348 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 10/229 (4%) Query: 19 TVLLSGCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 ++LS C + L P+G + EQ L+ A +MLIV++ ++ ++R D Sbjct: 18 VLVLSACGRSDLSTLRPQGPVAEEQFGLMKLAISIMLIVIVVVFAISFYVIIRFRRRPGD 77 Query: 76 AKYSPNWSHSNKVEAVVWTVPILIIIFL-AVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 ++K+E ++WTV +I++ + V T ++ L SK D + + + V + Sbjct: 78 NTIPKQVEGNHKLE-IIWTVIPIILLIILGVPTIQSVFNL--SKDHTKDPEAVKVVVTAH 134 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTR-L 193 + W F YPE GI T E+ P + + S V++SF+IP L +I A G + Sbjct: 135 QYWWEFEYPELGIKTAQELVIPKGKTISIEAKSADVLHSFWIPSLAGKIDANPGANVNIM 194 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 + A + G Y G A GP M FK + + D A+FD+W A A Q+P Sbjct: 195 YFSAPKEGVYLGKCAELCGPSHGLMDFK-VKSVDEASFDRWTA-ALQAP 241 >UniRef50_C5D863 Cytochrome c oxidase subunit 2 n=87 Tax=cellular organisms RepID=C5D863_GEOSW Length = 356 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 15/253 (5%) Query: 3 LRKYNKSLGWLSLFAG-TVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++K+ + SLF+ +LL+GC + L P G+ Q SL+L + +ML+V++ Sbjct: 1 MKKWLHNWRLFSLFSMIALLLAGCGKPFLSTLQPAGEAADMQFSLMLLSTAIMLLVIVVV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFL-AVLTWKTTHALEPS 117 ++ V ++R + P N +VWTV +I++ + AV T K T L Sbjct: 61 TIIFVYVVIRFRQRKGEENKIPKQVEGNHTLEIVWTVIPIILLIILAVPTVKATFDLADV 120 Query: 118 KPL---AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSF 174 KP+ D+ + + V + + W F YP+ G+ T ++ P + VYF + ++ V +SF Sbjct: 121 KPMNKEKRDKDTLVVNVRASLYWWEFEYPDYGVITSQDLVVPTDERVYFNLKASDVKHSF 180 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEP------GTYDGISASYSGPGFSGMKFKAIATPDR 228 +IP +G +I + + L ++ + G A GP + M FK A P R Sbjct: 181 WIPAVGGKIDTNIENKNQFWLEFDQERAEKAGNIFYGKCAELCGPSHALMDFKVKAVP-R 239 Query: 229 AAFDQWVAKAKQS 241 FDQW+ K K + Sbjct: 240 EEFDQWIEKMKNA 252 >UniRef50_C6IYW1 Cytochrome c oxidase subunit 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYW1_9BACL Length = 352 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%) Query: 20 VLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW-KYRASNKD 75 +LLS C ++L P+G + Q LI + +M++V++ +A + W KYR Sbjct: 20 LLLSACGREDLSVLRPQGPVAEGQLGLIKLSITIMIVVMLIVFGIA-AYVWIKYRRKPGQ 78 Query: 76 AKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 ++K+E ++WT +P+++++ LAV T + A + + D + I+V S Sbjct: 79 NDIPKQVEGNHKLE-IIWTAIPLVLVLILAVATVQKVFAF--GEDYSKDANAVKIKVTSH 135 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL-GSQIYAMAGMQTRL 193 + W F YP+ GI T ++ P + ++ + V++SF++P L G G + Sbjct: 136 LFWWEFTYPDYGITTAQDMIIPTGKKIALELKTADVLHSFWVPSLAGKTDTNTDGTINKA 195 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE 252 L A G Y G A G + M+FK A +FD+WV K T+ D A E Sbjct: 196 WLEATNEGVYLGKCAELCGKSHAFMEFKVKAVSPE-SFDRWVEAMKAPVQTIQDPAVAE 253 >UniRef50_B5WPG4 Cytochrome c oxidase, subunit II n=2 Tax=Burkholderia RepID=B5WPG4_9BURK Length = 228 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 102/224 (45%), Gaps = 33/224 (14%) Query: 13 LSLFAGTVL-LSGCNSAL--LDPKGQIGLEQRSL---ILTAFGLMLIVVIPAILMAVGFA 66 L++ AG++ LSGC L LDP G L +L ++ +V+ LM V Sbjct: 3 LTVQAGSLAALSGCAGPLSTLDPSGPAAASIAGLWWVMLAGAVILFAMVLVLFLMTV--- 59 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTV------PILIIIFLAVLTWKTTHALEPSKPL 120 + P W ++V W V P +I+I L L P + Sbjct: 60 -----------FRPGWG--SRVSPARWIVLGGLVLPAVILIPLICYALYAGELLLPLR-- 104 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQG-IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 AH P IE ++ W+W F YPE G + T N + PA TPV VTS V+++F+IPR Sbjct: 105 AH--APARIEAIAQQWRWTFRYPELGNVETGNVLHLPAGTPVDIVVTSMDVVHAFWIPRF 162 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAI 223 +I A+ G T L + A++PG Y G + G G + M F I Sbjct: 163 AGKIDAVPGHHTLLRIEADQPGQYAGQCNQFCGIGHAQMHFTVI 206 >UniRef50_B1ZVF0 Cytochrome c oxidase subunit 2 n=2 Tax=Verrucomicrobia RepID=B1ZVF0_OPITP Length = 311 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 45 LTAFGLMLIVVIPAILM-AVGFAW-KYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIII 101 L L + VI A++ AVG++ +YR DA+ H+ VE ++WTV P LI++ Sbjct: 22 LFVINLWVCAVIFALVAGAVGYSLVRYRWREGDAEPVQLAGHTT-VE-IIWTVIPFLIVV 79 Query: 102 FLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPV 161 L LT HA++ S P A E + I + W W P+ G NEI P P+ Sbjct: 80 VLFGLT---VHAMQKSDPPAAPEPDLVI--IGHQWWWEIRDPKLGYVAANEIHIPVGKPL 134 Query: 162 YFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFK 221 ++ + V++ F++PRL ++ + G + + A++PG Y G+ + + G + M+F+ Sbjct: 135 SIRLDTVDVLHEFWVPRLTRKMTTVPGAGNHVWMQADQPGVYQGVCSEFCGTQHAWMRFE 194 Query: 222 AIATPDRAAFDQWV 235 IA +A ++ WV Sbjct: 195 VIAE-SQADYEAWV 207 >UniRef50_B4WPA2 Cytochrome c oxidase subunit 2 n=2 Tax=Cyanobacteria RepID=B4WPA2_9SYNE Length = 332 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 31/252 (12%) Query: 45 LTAFG-LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIF 102 +TA G + I V+ +L ++ F RA+ D P + K+E V+WT VPI++II+ Sbjct: 70 MTAVGTFIFIGVVGTLLYSMIFQ---RAAKYDNSDGPPIEGNVKLE-VIWTAVPIMLIIW 125 Query: 103 LAVLTWKTTHAL-------------------EPSKPLAHD----EKPITIEVVSMDWKWF 139 + +++KT + EP KP+ D + P IEV S W W Sbjct: 126 IGTVSYKTYDQMSILGTIAPKVMATVDTVPGEPRKPVPGDISPTDNPAPIEVHSRQWSWE 185 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 F YP+Q +++ E+ P N FK+TS+ V++ F++P + + G + L Sbjct: 186 FYYPDQNVSST-ELHLPLNQRARFKLTSDDVLHGFYVPAFRVKQDIVPGKEIDFALTPIR 244 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 G Y + YSG F+ + + + + QW+ Q+P ++ A+E+ + + Sbjct: 245 AGRYRLRDSEYSGTYFASNQTNVVVESEE-EYQQWLGAIAQNPPQAAENIAYEEFSQAEQ 303 Query: 260 YNQVEYFSNVKP 271 ++ VKP Sbjct: 304 GTISLGWATVKP 315 >UniRef50_Q3SQ74 Cytochrome c oxidase, subunit II n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SQ74_NITWN Length = 244 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 2/104 (1%) Query: 123 DEKPITIEVVSMDWKWFFIYPEQGIAT--VNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 ++ P+ + + W W F YP+ AT VN + PA PV VT+ V++SF++PRLG Sbjct: 122 EQPPLKVAAQARQWTWSFAYPDSRRATLSVNVLHIPAGEPVDVIVTTKDVIHSFWVPRLG 181 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA 224 +I A+ G + + L A+ PG Y G+ A + G G S M+F +A Sbjct: 182 GKIDAIPGHRNVVRLQADRPGVYGGVCAEFCGAGHSAMRFTVLA 225 >UniRef50_D1C449 Cytochrome c oxidase subunit 2 n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C449_SPHTD Length = 345 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 18/229 (7%) Query: 20 VLLSGCNSAL----LDPKGQIGLEQRSLILTAF--GLMLIVVIPAILMAVGFAWKYRASN 73 V +SGC DP + L + F +++ V++ I++ ++ R ++ Sbjct: 22 VFVSGCAGGTPQSASDPAADNARKIWDLFMPIFWMSVVVFVIVQGIIIVALIRFRRRPND 81 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD--EKPITIEV 131 P+ H N + WT+ +I+ + TT A LA D ++ +T+ Sbjct: 82 P----IPHAMHGNTKLEIAWTLAPALILAAIAVPTITTIA-----DLARDPGDEALTVRA 132 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 + W W F YPE G+ T +E+ P P+ ++ S +++SF++PRL + + G Sbjct: 133 IGQQWWWAFEYPESGVVTADELHVPVGRPIRVELESKDIIHSFWVPRLAGKQDVVPGRTN 192 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 +H A+ G Y G A + G + MKFK I + F+ W+ + Q Sbjct: 193 TIHFTADAVGEYSGQCAEFCGAQHANMKFKVIVQTEE-EFEAWLEQQLQ 240 >UniRef50_C1A5N6 Cytochrome c oxidase subunit 2 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5N6_GEMAT Length = 429 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 13/200 (6%) Query: 45 LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFL 103 L +G ++ + + A L+ F ++ R +P H N + WT +P +I++F+ Sbjct: 52 LLFWGTLVFIGVEAGLVYTIFRYRRRPGGA----TPKQVHGNTALEITWTAIPAVILVFI 107 Query: 104 AVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYF 163 A+ T T + A D + +EV+ W W F YP+ GI T NE+ P V F Sbjct: 108 AIPTVSTIFKTQAKA--APDA--LQVEVIGHQWWWEFKYPQLGITTANELYLPNGRTVNF 163 Query: 164 KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE---PGTYDGISASYSGPGFSGMKF 220 ++ + V++SF+IP++G + ++ L N ++G A + G + M+F Sbjct: 164 QLKTVDVLHSFWIPQMGGKRDLVSNRTNYLWFTPNADLPSSAWNGFCAEFCGASHANMRF 223 Query: 221 KAIATPDRAAFDQWVAKAKQ 240 + + T A F+QW A KQ Sbjct: 224 R-VYTVTPAEFEQWAAHQKQ 242 >UniRef50_A4A2K3 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2K3_9PLAN Length = 337 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 14/230 (6%) Query: 20 VLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR---ASNKDA 76 ++L + DP +E R L + ++ + F +++R + +D Sbjct: 16 LVLVAQTPEMFDPASPDAIEIRELFYLVLAITTLIFVLVGGALAYFIYRFRDPPGAPRDD 75 Query: 77 KYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMD 135 P S +E + WT+ P LI++ L+++ ++ A+ P E + + V Sbjct: 76 SEPPQIYGSQPIE-IAWTLAPTLIVLVLSLVVIRSVIAMRSEPP---TEGTLRVRAVGHQ 131 Query: 136 WKWFFIYPEQGIATVNEIAFP-----ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 W W F YPE G T NE+ P A TPVY ++ S V++SF++P+L + + Sbjct: 132 WWWEFEYPEFGFTTANELVIPTSDADAPTPVYLQLESADVIHSFWVPKLAGKTDLVPAKT 191 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 R+ L AN G Y+G A Y G + M + A A F++WVA ++ Sbjct: 192 NRMRLEANAAGIYEGRCAEYCGTQHAKMLIRVTAV-SPAEFEKWVADQQR 240 >UniRef50_Q7USM3 Cytochrome-c oxidase chain II/c n=1 Tax=Rhodopirellula baltica RepID=Q7USM3_RHOBA Length = 368 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 6/153 (3%) Query: 100 IIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY--PE-QGIATVNEIAFP 156 I+ A+LT+ E +P + +EV + W W Y P+ + I T NEI P Sbjct: 129 IVLTALLTYGLAMLPELQRPAPEGSQ--VVEVSGVRWWWRVNYRMPDGKKIETANEIHLP 186 Query: 157 ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 N PV FK+ S V+++F+IP LG ++ M G + RL L G + G+ A Y G + Sbjct: 187 VNEPVEFKLKSEDVIHAFWIPSLGGKVDMMPGRENRLKLHPTRVGVFRGVCAEYCGEAHT 246 Query: 217 GMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 M F I R FD W+ + + SD+A Sbjct: 247 QMAFDVIVQ-SREEFDAWLHQQALPAVSGSDVA 278 >UniRef50_B9KZ00 Cytochrome c oxidase subunit 2 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZ00_THERP Length = 388 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 5/174 (2%) Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKP 126 ++R D + P H N+ + WT +P +I+ +AV + T E ++ Sbjct: 102 RFRRQPGDTRIPPQ-VHGNQRLEIAWTLIPAIILALIAVPS--TRLIFELNRDPGPGSNA 158 Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + +V+ W W F YPE GI T ++ PV +TS+ V++SF+ PRL ++ A+ Sbjct: 159 LRAQVIGHQWWWEFRYPEYGIVTAGDLHLVVGRPVVLTITSHDVIHSFWPPRLAGKVDAV 218 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 G + E G + G A G + M+F+ + + FD WVAK ++ Sbjct: 219 PGRAHTMVFTPEETGVFYGQCAELCGAQHAHMQFRVVVQ-TQEEFDAWVAKLRR 271 >UniRef50_Q07JU2 Cytochrome c oxidase, subunit II n=6 Tax=Alphaproteobacteria RepID=Q07JU2_RHOP5 Length = 560 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 5/127 (3%) Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPE--QGIA-TVNEIAFPANTPVYFKVTSNSVMNSFF 175 P+A D + I+V + W+W F YPE +G+ ++N + P P+ +V+S V++SF+ Sbjct: 436 PVASDT--LRIDVEARQWQWTFRYPEDREGVGLSINTLHIPVGRPIDLRVSSADVIHSFW 493 Query: 176 IPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 +PRLG +I A+ G R+ L A++ G Y G+ A + G + M+F A P A D+ Sbjct: 494 VPRLGGKIDAIPGHVNRIRLSASQAGIYRGVCAEFCGTEHTRMEFSVEAHPPEAYRDRLR 553 Query: 236 AKAKQSP 242 A + P Sbjct: 554 ALPQAPP 560 >UniRef50_Q39Z27 Cytochrome c oxidase subunit 2 n=4 Tax=Geobacter RepID=Q39Z27_GEOMG Length = 302 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 11/207 (5%) Query: 48 FGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVL 106 FG+ L++++ VGF +YR S S + SN ++WT +P +I++ + Sbjct: 20 FGVSLVLLLGITATMVGFVIRYRRSRAPEPTSQ--AASNIWLEIIWTALPTIIVMAMFYY 77 Query: 107 TWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVT 166 W L + + D +T + W W F Y T + P PV + Sbjct: 78 GWAGYLTL---RNVPKDALEVT--ATARMWSWSFTYANG--KTSPTLYVPVGKPVLVHLV 130 Query: 167 SNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATP 226 S V++ F++P + + GM+ + +A++PGTYD + Y G G SGM +A P Sbjct: 131 SEDVIHGFYVPAFRVKHDVVPGMKNHVWFVADKPGTYDLFCSVYCGLGHSGMVSTVVAVP 190 Query: 227 DRAAFDQWVAKAKQSPNTMSDMAAFEK 253 + A F W+AKA++ N A EK Sbjct: 191 E-AEFQAWLAKAEKEENQGGGRALLEK 216 >UniRef50_B3Q582 Probable cytochrome c oxidase protein, subunit II n=2 Tax=Rhizobium etli RepID=B3Q582_RHIE6 Length = 332 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 23/239 (9%) Query: 14 SLFAGTVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 SLF + LS C + L+ G +E R L+L + +V + ++MAV AW Sbjct: 8 SLFPHLLFLSSCTGDPQSALNADGPSAMELRELLLLFVAVCGVVFV--LVMAV-MAWALL 64 Query: 71 ASNKDAKYSPNWSHSNK---VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 SN A P S A+V TV L+I FL V ++ T +++ + P Sbjct: 65 RSNNPAPGRPQTERSMGRAVSAAIVGTV--LVITFLTVSSFYATRSID-----WREADPA 117 Query: 128 TIEVVSMDWKWFFIY----PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQI 183 TI V W W F Y P + T NE+ P T V ++ + V++SF++P L + Sbjct: 118 TIVVRGQQWWWQFTYLDADPAKTFQTANELHIPVGTDVRLRLEATDVIHSFWVPNLTGKQ 177 Query: 184 YAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQWVAKAKQS 241 + G + L L A+ PG Y G A + G S M +A PD + +W+ +++ Sbjct: 178 DLVPGRENGLTLHADNPGIYRGQCAEFCGLQHSHMALLVVAEEPDE--YARWLDAQRRA 234 >UniRef50_C1VBF5 Cytochrome c oxidase subunit 2 n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VBF5_9EURY Length = 254 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 27/235 (11%) Query: 13 LSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 L+LFA V SA L I L+ AF + L+V + V F Sbjct: 17 LALFADPVAAQASASAEL-----INDLNSRLLYVAFPITLLVEFILLYAVVKF------R 65 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPI-LIIIFLAVLTW------KTTHALEPSKPLAHDEK 125 N D +P + N+ + WTV +I++F+ V ++ TH +P + L D Sbjct: 66 NND---NPLPTKENRRLEITWTVATAIILLFVGVASYGVLADDNVTH--QPEEELQGD-- 118 Query: 126 PITIEVVSMDWKWFFIYPEQG-IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 P+ + + W W YPE G T EI P + PV F+VTS V++ F +P++G + Sbjct: 119 PVVVHAEAYQWGWEMSYPEDGNFTTGTEIVVPKDRPVVFEVTSRDVIHGFHVPKMGMKTD 178 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 AM G + + E TY G Y G S M F ++ + + W+++ + Sbjct: 179 AMPGQINTVKTVPYEEDTYQGYCTEYCGVAHSQMYF-SVEVVSQEEYQTWLSEQQ 232 >UniRef50_A4VKM4 Heme/copper-type cytochrome/quinol oxidase, subunit 2 n=4 Tax=Proteobacteria RepID=A4VKM4_PSEU5 Length = 532 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 18/200 (9%) Query: 91 VVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV 150 V+ TV I+ ++ + T ++ L E+P+ ++V+ W W YPE G+ T Sbjct: 293 VLPTVSIVALLAFGIPTGRSMLPLP-----VEGEQPLRVQVIGHQWWWEVRYPESGVVTA 347 Query: 151 NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASY 210 N+ P + PV +VTS V++SF++PRLG ++ + G L L A++ G + G + + Sbjct: 348 NQFILPIDRPVDVEVTSADVIHSFWVPRLGGKLDMVPGRTNTLRLQASQTGVFRGQCSEF 407 Query: 211 SGPGFSGMKFKAIATPDRAAFDQWV----AKAKQSPNTMSD------MAAFEKLAAPSEY 260 G + M A + AF W+ + Q P + ++A S+ Sbjct: 408 CGSQHAHMILHVEAL-EADAFATWIEARTGREHQPPGGAAGQVFDERCGQCHRVAGVSDG 466 Query: 261 NQVEYFSNV--KPDLFADVI 278 N+ S++ +P L A VI Sbjct: 467 NRAPDLSDLATRPTLGAGVI 486 >UniRef50_C1SI89 Cytochrome c oxidase subunit 2 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SI89_9BACT Length = 402 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 27/266 (10%) Query: 38 LEQRSLILTAF----GLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH--SNKVEAV 91 LE S + TAF G+ ++I L+AV F +KY + P+ S N + Sbjct: 2 LETISRVDTAFQFIFGISFAIMILITLVAVFFLFKYHHTKH-----PDASEIDGNVAAEL 56 Query: 92 VWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV 150 WT+ P LI++ + W AL S P E ++V + W W F YP T Sbjct: 57 TWTIIPTLIVLAMFWFGWSGYKALR-SAPADSME----VQVTARMWSWKFEYPNG--KTS 109 Query: 151 NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASY 210 E+ PAN PV +TS V++SF++P ++ + GM T + A EP YD + A Y Sbjct: 110 KELYVPANKPVKLNMTSLDVIHSFYVPAYRVKMDTVPGMNTYVWFNAGEPAQYDILCAEY 169 Query: 211 SGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVK 270 G + M K + P+ ++ W+A +Q + A + + + ++ V Sbjct: 170 CGVRHAFMLSKVVVLPEE-EYELWLASDEQPSTDKPEAVAILEKHGCIDCHSLDGTELVG 228 Query: 271 PDLFADVINKFMAHGKSMDMTQPEGE 296 P F D+ +G+ + P+GE Sbjct: 229 P-TFKDI------YGRETVVVTPDGE 247 >UniRef50_D0KXM7 Cytochrome c oxidase subunit 2 n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXM7_HALNC Length = 377 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 40/229 (17%) Query: 46 TAFGLMLIVVIPAILMAVG----FAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILII 100 TA+ L ++V +++ +G AW + + H N V+WT VP LI+ Sbjct: 41 TAYDLHMLVFWVCVVIGIGVFSVMAWSLVRHRRSRGAVASQFHENTAVEVIWTLVPALIL 100 Query: 101 IFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFP---- 156 I +AV K A ++P D + I+V+ WKW + YP +GI+ + +A P Sbjct: 101 IAIAVPATKAIIAAN-AQPATPD---VVIDVLGSQWKWEYKYPREGISFFSNLASPSRDA 156 Query: 157 ---------ANTPVYF-----------------KVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 AN P Y +VTS+ V++S+++P+LG + A+ G Sbjct: 157 SQLGAKESPANVPYYLLNVDHPMVVPVGKTVQVQVTSSDVIHSWWVPQLGFKTDAIPGKV 216 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 ++ + ++PGTY G A G G + M + AA+ +W+ K K Sbjct: 217 NKMSFVIDKPGTYRGQCAELCGAGHAFMPI-VVEAMMPAAYAEWMNKEK 264 >UniRef50_UPI0001C30E64 cytochrome c oxidase, subunit II n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E64 Length = 344 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 11/179 (6%) Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 AW++R + H N V+WT VP ++++ L + +E P Sbjct: 67 AWEFRMRPGQEQQDGPPIHGNTRLEVIWTAVPAIMLVALCSYAYAVLRDIEEKHP----- 121 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNE--IAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 + + V + + W + YP++G VN + P + PV FKV + V++ F++P + Sbjct: 122 DTLVVNVSAQQFAWRYSYPQEGGRPVNSTMLVLPKDRPVLFKVRAEDVIHDFWVPAFRVK 181 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKA-IATPDRAAFDQWVAKAKQ 240 I A+ G+ T + G Y + A G G + M+ A + TP A+FD+W+A+ Q Sbjct: 182 IDAVPGITTEVRATPTRTGRYPVVCAELCGLGHAVMRSTAWVVTP--ASFDRWLARQGQ 238 >UniRef50_A4YDJ5 Cytochrome c oxidase, subunit II n=12 Tax=Sulfolobaceae RepID=A4YDJ5_METS5 Length = 147 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 77/139 (55%), Gaps = 3/139 (2%) Query: 87 KVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 ++ +V+ + IL+ FL L+++ + + +E I I+V++ + W F+YP G Sbjct: 8 EISTIVFAIAILV--FLGALSFQYLGYISHGSYIPSNETAIPIKVIAKQYVWEFVYPN-G 64 Query: 147 IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 + N++ A P F++TS V+++F+I +LG ++ A+ G L+++ N+PG Y+ Sbjct: 65 TVSYNKVVIQAGKPYVFQLTSADVIHAFYIVQLGMKMQAIPGYTYDLYVLVNQPGVYNIW 124 Query: 207 SASYSGPGFSGMKFKAIAT 225 A + GPG MK I T Sbjct: 125 CAEFCGPGHYTMKGIMIVT 143 >UniRef50_D2R8Q4 Cytochrome c oxidase, subunit II n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R8Q4_9PLAN Length = 269 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 16/192 (8%) Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHD 123 F WKY + ++H + VVW++ P ++F+A+ + +P D Sbjct: 71 FLWKYDVATNTKPIE--YTHGSHTLEVVWSIIPAAALLFIAIYQMNAWADAKMRRPQLAD 128 Query: 124 --EKPITIEVVSMDWKWFFIY---------PEQGIATVNEIAFPANTPVYFKVTSNSVMN 172 KP EV ++W Y P+ + TVNE+ PAN + + S V++ Sbjct: 129 GSPKPAIAEVTGRQFEWRIRYAGADGVVGTPDD-VLTVNELRVPANEEIVLAIKSQDVLH 187 Query: 173 SFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFD 232 SFF+P L + + GM+ + AN+ G YD + A G G M+ + I RA FD Sbjct: 188 SFFLPNLRLKQDVVPGMKQFVWFRANKTGVYDIVCAELCGWGHYKMRGR-ITVQSRADFD 246 Query: 233 QWVAKAKQSPNT 244 +W+A+A + N Sbjct: 247 EWLAQAYRDQNV 258 >UniRef50_C1XKJ9 Cytochrome c oxidase subunit 2 n=2 Tax=Meiothermus RepID=C1XKJ9_MEIRU Length = 355 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 39 EQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PI 97 E R L++ G +V + V K+R + K+ P H N V WTV P Sbjct: 43 EVRGLLVWVMGFAALVFVVVTGALVYVTVKFRRTGKETG-EPEQMHGNDRLEVAWTVIPT 101 Query: 98 LIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPA 157 +I++ + LT ++ L+ P A + +EV + W F Y + G+ NE+ P Sbjct: 102 VIVLIIFGLTAQSMFKLDRPTPGA-----MVVEVRGWQFWWDFHYKDYGVRNSNELILPV 156 Query: 158 NTPVYFKVTSN-----SVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 PV F++T V++SF I + A+ G+ T + + + GTY G G Sbjct: 157 GKPVRFEITGGDGTNYDVIHSFRITSMVGARDAIPGVVTHIEVTPEKIGTYYGQCVELCG 216 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAK 239 + M+F+ P + FD+W+ A+ Sbjct: 217 ASHANMRFRVKVVP-QEEFDRWIEGAR 242 >UniRef50_A0KDK6 Cytochrome c, monohaem n=47 Tax=Burkholderia RepID=A0KDK6_BURCH Length = 434 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 127 ITIEVVSMDWKWFFIYPE----QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 +TI V + DW W YP+ +G T NEI P PV ++ S V+++F++P+L + Sbjct: 218 LTITVTAQDWWWAVRYPDDADGRGFVTANEIHIPVGQPVAIELKSADVIHAFWVPQLAGK 277 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 + G R L A+ PG Y G + Y G + M F+ +A P AAF W+ Sbjct: 278 TQTIPGQTNRQWLQADRPGVYRGQCSQYCGAQHAHMAFEVVAEPP-AAFHAWL 329 >UniRef50_UPI0001C164F8 cytochrome C oxidase subunit II, transmembrane region protein n=2 Tax=Nostocaceae RepID=UPI0001C164F8 Length = 338 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 +++ KP+ +EV ++ + W F YP+ GI T EI P V K+T+N V+++F++P Sbjct: 171 SNEAKPLVVEVSALQYAWIFTYPDAGITT-GEIHVPVGQQVQMKMTANDVIHAFWVPEFR 229 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 + + G +TR+ + GTY + A GP M+ + I + AFD WV + Sbjct: 230 LKQDVIPGRETRVRFTPKKEGTYTVVCAELCGPYHGAMQTQVIVE-SKQAFDAWVQE 285 >UniRef50_UPI0000164D05 cytochrome c oxidase, subunit II n=1 Tax=Deinococcus radiodurans R1 RepID=UPI0000164D05 Length = 334 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 18/218 (8%) Query: 18 GTVLLSGCNSA----LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 G +LS C L D E L A GL +I+ + M K+R Sbjct: 60 GAAVLSSCGQGQNIFLGDQAAAYNREIWDLSKWAIGLSIIIFVGVSGMLFYTVQKFREDR 119 Query: 74 KDAKYSPNWSH-SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVV 132 A +P H +N++EA + +PI++++ L+VL+ ++ L P ++ + IE Sbjct: 120 NTA--APQQFHGNNRLEAWLIGIPIILVLGLSVLSVRSLARLNPV-----SQQTLGIEAT 172 Query: 133 SMDWKWFFIYPE---QGIATV---NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + W F YP QG +TV NE+ PA V TS V++ F+ P LG Q ++ Sbjct: 173 GAQFWWNFTYPGSPVQGGSTVANGNEMVMPAEQKVAISTTSKDVIHGFWAPNLGGQRASI 232 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA 224 ++ L PG Y G + G + M+FK IA Sbjct: 233 PTVKRVWELDTQRPGVYQGNCSQLCGASHANMRFKVIA 270 >UniRef50_A6C0L0 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomyces RepID=A6C0L0_9PLAN Length = 277 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 21/233 (9%) Query: 36 IGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV 95 +G+ SL + +V + + V W+ A+N+D + + H N ++W++ Sbjct: 41 LGIRIDSLFYLILAITALVFVGTQAVLVYALWR-SANNRDER--AQYIHGNHKLELIWSI 97 Query: 96 -PILIIIFLAV--LTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG------ 146 P I++FLA+ + + P A + P+ EV + ++W F YP G Sbjct: 98 IPGAILLFLALYQMNLWADFRFKNHYPEAAVKDPLA-EVTARQFEWRFRYPAIGKQLQPK 156 Query: 147 -----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 + TVNE+ P PV ++ S+ V +SFF+P L + A+ G+Q + AN+PG Sbjct: 157 PQPDDLYTVNELHVPFGKPVLIQLRSDDVQHSFFLPALRIKQDALPGLQIPVWFEANKPG 216 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK--AKQSPNTMSDMAAFE 252 YD + A G G MK I P+ A + ++ +QS + + +AA E Sbjct: 217 VYDLVCAELCGWGHYKMKAHVIVQPE-AEYQAYLKNLTQQQSYDGLGKIAANE 268 >UniRef50_D1RCQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Legionella longbeachae D-4968 RepID=D1RCQ5_LEGLO Length = 401 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 36/217 (16%) Query: 84 HSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY 142 H N + W+V P LI++ LA+ + ++ ++ + IT+++V WKW + Y Sbjct: 86 HDNPRLEIFWSVIPFLILVGLAIPATRVLMRMDDTR-----QSEITVKIVGYQWKWQYEY 140 Query: 143 PEQGIATV----------------NE---------IAFPANTPVYFKVTSNSVMNSFFIP 177 +QGI+ NE + P N V F VTSN V++S+++P Sbjct: 141 LDQGISYFSILSTPFNQIENTQKKNEWYLLEVDKPLVLPVNKKVRFLVTSNDVVHSWWVP 200 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG--PGFSGMKFKAIATPDRAAFDQWV 235 LG + A+ G +PGTY G A G GF + +A++ D FD+WV Sbjct: 201 ELGIKRDAIPGFMYEAWATIEKPGTYRGQCAELCGVNHGFMPIVVEAVSQDD---FDKWV 257 Query: 236 AKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPD 272 A +S + ++ A E + +++ F K D Sbjct: 258 ASQTKSEDKYANEEAAEAVQKTMTRDELLAFGKEKYD 294 >UniRef50_C6B875 Cytochrome c oxidase, subunit II n=4 Tax=Rhizobiales RepID=C6B875_RHILS Length = 330 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 10/141 (7%) Query: 99 IIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG----IATVNEIA 154 II L ++++ TT + + E +T+ V W W FIYP+ G T NE+ Sbjct: 92 IIAGLTIISFYTTRKIGEAS-----ETALTVTVRGQQWWWQFIYPDDGSGREFKTANELH 146 Query: 155 FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPG 214 P V ++ S V++SF++P L ++ + G L L A+ PG Y G A Y G Sbjct: 147 IPVGQAVKLRLESADVIHSFWVPSLAGKLDLIPGRINELTLHADRPGIYRGQCAEYCGLQ 206 Query: 215 FSGMKFKAIATPDRAAFDQWV 235 S M IA D ++ QWV Sbjct: 207 HSHMAVLVIAE-DEVSYRQWV 226 >UniRef50_Q7NMM6 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobacter violaceus RepID=Q7NMM6_GLOVI Length = 319 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 33/215 (15%) Query: 49 GLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLT 107 G M+ + I A+L+ GFA+K RA + D P S ++E ++WT+ PI+++ FL V + Sbjct: 63 GTMITLAIVALLVYSGFAFK-RAPD-DYSDGPPIEGSLQLE-ILWTILPIVLVTFLGVYS 119 Query: 108 WKT-------------THALEPSK---------------PLAHDEKPITIEVVSMDWKWF 139 + +H L P P + +T+ V S+ W W Sbjct: 120 YDVYLKLIRSNPQTGASHHLGPKSQLREVAQVTDSPELGPKREGQTELTVAVESVQWAWV 179 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 F YP+ G T E+ P N PV K+T+ V++ F++P + + G T + L+ + Sbjct: 180 FTYPQSGGLTTAELHLPVNRPVVLKMTAKDVIHGFWVPEFRLKQDIIPGRTTEIRLLPDR 239 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 G Y G M+ + A F++W Sbjct: 240 VGEYVLHCTQLCGTYHGAMR-ATVYVQTAAEFEKW 273 >UniRef50_B0UJY9 Cytochrome c oxidase, subunit II n=6 Tax=Rhizobiales RepID=B0UJY9_METS4 Length = 338 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 14/210 (6%) Query: 48 FGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI---LIIIFLA 104 F +L + A+++A+ +++ R + + + + A+V + + L+++ L Sbjct: 46 FSAVLAAIWLAVMLALLASFRARRAETADPLAIDPRRERRATALVAGLTVATGLVVLVLT 105 Query: 105 VLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY----PEQGIATVNEIAFPANTP 160 L++ L + +TI V+ W W Y P +G T NEI P P Sbjct: 106 GLSYAGQRRL-----FGDEAARVTIRVIGHQWWWEVQYEDPEPSRGFTTANEIHVPVGVP 160 Query: 161 VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF 220 V + S V++SF++P L + + G +H A PG Y G A + G + M Sbjct: 161 VRLTLDSTDVIHSFWVPSLTGKQDLIPGRTNAIHFTAERPGLYRGQCAEFCGMQHAKMGL 220 Query: 221 KAIATPDRAAFDQW-VAKAKQSPNTMSDMA 249 IA D +FD+W +A P SD A Sbjct: 221 LVIAE-DEESFDRWRRGQAAPRPEPGSDEA 249 >UniRef50_A7BSH7 Cytochrome c oxidase aa3, subunit II n=1 Tax=Beggiatoa sp. PS RepID=A7BSH7_9GAMM Length = 256 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 14/180 (7%) Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIII----FLAVLTWKTTHAL 114 ++ + F +KYR N+D + +P A+ WTV PI +I+ FLA W +A Sbjct: 65 IVTLYFMFKYRRRNEDDEGNP--PRMTSTLAIGWTVIPIFLIMADDFFLAAQGWDLWNAY 122 Query: 115 EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSF 174 P E I++ S + W + YP G+ T NE+ PA TP+ ++TS ++S Sbjct: 123 R-QVPAERME----IQLESGMYSWDYTYP-NGVETQNELIVPAGTPIMLRMTSRDTLHSH 176 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 FIP + +M G T L EPG + A Y G S M K I + A F+QW Sbjct: 177 FIPDFRVKEDSMPGRITYLWFYPQEPGEHQVTCAEYCGIMHSYMVGKVIVKSE-ADFNQW 235 >UniRef50_Q2W5A1 Cytochrome c oxidase subunit 2 n=3 Tax=Magnetospirillum RepID=Q2W5A1_MAGSA Length = 293 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 31/221 (14%) Query: 45 LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP---NWSHSNKVEAVVWT-VPILII 100 +T+ + VI I + V Y + A +P WSH+ +E VVWT +P +I+ Sbjct: 57 ITSLATFINGVIVVITLLVSGLLLYACTRFRADRNPKPATWSHNTPLE-VVWTAIPAVIL 115 Query: 101 IFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG-------------- 146 + +A+ +++ + ++ HD +T+++V W W + YP+ Sbjct: 116 LLIAIPSFRLLYFMD----RVHDAD-MTLKIVGHQWYWTYEYPDHDFKFDSNMVQAEDLK 170 Query: 147 ------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 + N + PA P+ ++T++ V++S+ +P G + A+ G + NEP Sbjct: 171 PGQPRLLTADNTLVVPAGVPIRLQMTADDVIHSWSVPAFGIKTDAVPGRLNETWVQVNEP 230 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 GTY G + G M A P + F WVA+AK++ Sbjct: 231 GTYYGQCSQLCGVNHGFMPVHVKAVP-KEEFLAWVAQAKKT 270 >UniRef50_Q01PD2 Cytochrome c oxidase subunit 2 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PD2_SOLUE Length = 341 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 18/208 (8%) Query: 42 SLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILII 100 SL + A + V+ ++L+ ++ R S+ D + P SN+VE + WTV PILI+ Sbjct: 46 SLFVLAVAAAIFTVVFSLLIYSLVRFRKR-SDDDGREPPQIYGSNQVE-LAWTVVPILIV 103 Query: 101 IFLAVLTWKT-THALEPSKPLAHDEKPITIEVVSMDWK--WFFIYPEQGIATVNEIAFPA 157 + L + T + L+ S+P + ++EVV++ + W F YP + T NE+ P Sbjct: 104 VTLFMATARVIAGTLKASRPSS------SVEVVAVGHQFWWEFRYPGLKVVTANELHVPL 157 Query: 158 N-----TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + TP + +TS +SF++PRL + + + + +EPG Y G A Y G Sbjct: 158 SEPGHPTPTFITLTSADTDHSFWVPRLAGKTDLIPNRVNTMWIDPHEPGLYLGQCAQYCG 217 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 + M + + R F +W+ + +Q Sbjct: 218 TQHAKMLLR-VYVQTRDEFARWIQEQRQ 244 >UniRef50_Q1NHI1 Cytochrome c oxidase, subunit IIc n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHI1_9SPHN Length = 322 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 18/234 (7%) Query: 12 WLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA 71 WL + AG L+ CN A G E R++ A L + I +M V + RA Sbjct: 7 WLLVLAG---LTACN-AEQSTLHVFGAEARAVRQMALLLTIGAAIIVTIMTVLYVRAVRA 62 Query: 72 SNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 SH + V+W I + L L +AL +P A + + V Sbjct: 63 PEG------KLSHDRGMRMVLWMGAIGPTLILTALL---IYALPAMRPRATAPGDLVVRV 113 Query: 132 VSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 + W Y G + + NE+ P V F++T+ V++SF+IP L ++ + Sbjct: 114 DGEQFWWRVAYDPAGDLSPLLSANEVRIPVGRTVVFELTARDVIHSFWIPGLAGKMDMIP 173 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 G RL + A + G Y G+ A + G + M F IA D FD W+ +++ + Sbjct: 174 GRTNRLVVQAEKSGRYRGVCAEFCGLSHALMAFDVIAM-DTTDFDAWLRRSRAA 226 >UniRef50_B2JRY1 Cytochrome c oxidase, subunit II n=2 Tax=Burkholderia RepID=B2JRY1_BURP8 Length = 354 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 23/209 (11%) Query: 30 LDPKGQIGLEQRSLILTAFGLMLIV---VIPAILMAVGFAWKYRASNKDAKYSPNWSHSN 86 L+P G Q IL + L LIV V A+L+A+ F RA DA +P + Sbjct: 41 LEPAGI----QAERILDLWNLTLIVCGAVFAAVLLAM-FIALLRAQRSDAATAPEPMPDD 95 Query: 87 KVEA-------VVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 + E +V + +++ L V T AL P+A+ P+ IE+ W W Sbjct: 96 RAERRTRRGVIAASSVSVALLVGLVVADVLTDRALS-KLPVAN---PVRIELTGQQWWWQ 151 Query: 140 FIYP----EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 +YP + G T NE+ PA PV + + V+++F++P L + + G+ + + Sbjct: 152 AVYPSDSGQPGFTTANELHVPAGRPVVVALKAGDVIHTFWVPNLHGKKDMLPGIASTIEF 211 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIA 224 A++PG Y G A Y G + M +A Sbjct: 212 RADKPGVYRGQCAEYCGAEHALMAMLVVA 240 >UniRef50_A9LGT2 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomycetales RepID=A9LGT2_9BACT Length = 324 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 10/195 (5%) Query: 53 IVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTT 111 I I A L+ V +K+R+ K P + + + W V P+++++++A ++ K Sbjct: 42 IFSIVAGLICVAL-FKFRSKGK----LPAQDFGSHRKEIAWIVAPVIVVLWIAAISAKLV 96 Query: 112 HALEPSKPLAH--DEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNS 169 + P AH E+ + V W W Y I + NEI P + +++S Sbjct: 97 LTFN-AVPQAHPPGEQVADLIVTGHQWWWEIEYAGTDIVSANEIHIPTGKRLRVQLSSAD 155 Query: 170 VMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRA 229 V++SF++ RL ++ A+ G + + L A+EPG Y G A + G + M F + D Sbjct: 156 VIHSFWVARLARKMDAIPGRENFIWLQADEPGVYQGRCAEFCGTQHAWMNF-LVHAHDPE 214 Query: 230 AFDQWVAKAKQSPNT 244 ++QW++K K P T Sbjct: 215 EYEQWLSKEKVVPPT 229 >UniRef50_A7HQK3 Cytochrome c oxidase subunit II n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HQK3_PARL1 Length = 394 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 27/218 (12%) Query: 22 LSGCNSAL--LDPKGQIGLEQRSL---ILTAFGLMLIVVI---PAILMAVGFAWKYRASN 73 LSGC+ L LDP G + +L +L ++ ++V+ A ++ GF +Y A Sbjct: 183 LSGCSGDLSALDPAGPAARDIAALWWAMLAGSAVLFLLVMGLFAAAMLKPGFGSRYAAKT 242 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVS 133 W + ++ VP+L ++ H P + P+ IE + Sbjct: 243 --------WIVAG---GILMPVPVLALLLFFAFAMGERHL-----PWRGEHNPVRIEARA 286 Query: 134 MDWKWFFIYPE--QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 W W F Y + T+ + PA V TS++V++ F++PRLG ++ A G + Sbjct: 287 HMWYWEFHYLDYPDAAPTIGVMHMPAQYDVDVIATSDNVIHGFWVPRLGGKVDATPGHEA 346 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDR 228 + L A+ PG Y G+ A + G G + M F+ A TP++ Sbjct: 347 AVRLYADRPGAYGGVCAEFCGTGHTTMTFRVEAHTPEQ 384 >UniRef50_B1ZMS7 Cytochrome c oxidase subunit 2 n=2 Tax=Opitutaceae RepID=B1ZMS7_OPITP Length = 425 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 18/205 (8%) Query: 45 LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS--PNWSHSNK-VEAVVWTVPILIII 101 +T + +++I V+ +A K+RA N +++ P SH N +E + +L ++ Sbjct: 65 VTVWVVLVIFVLVGSTLAYAIL-KFRARNAADEHAAPPPQSHGNPLIELSLIGASVLALV 123 Query: 102 FLAVLTWKT---THALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV------NE 152 +AV T K TH + P++ A D PIT + W + F YP + I V NE Sbjct: 124 VIAVPTLKGIWYTHDV-PAEEKA-DAYPITAQ--GYQWWFRFEYPNEQIPNVGSLVTSNE 179 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + PA PV + V++SF++PRL ++ + L L A+EPG + G A Y G Sbjct: 180 LVIPAGRPVRIDLRGMDVIHSFWVPRLAGKVDMIPNRANFLWLKADEPGYFWGQCAEYCG 239 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAK 237 + M+F+ IA R F++W+ + Sbjct: 240 DSHAVMRFRVIALGPR-EFNEWLEQ 263 >UniRef50_Q3A1J0 Cytochrome c oxidase subunit 2 n=2 Tax=Desulfuromonadales RepID=Q3A1J0_PELCD Length = 318 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%) Query: 43 LILTAFGLMLIVVIPAILMAVGFAWKY-RASNKDAKYSPNWSHSNKVEAVVWT-VPILII 100 + L FG+ LI+++ + V FA ++ R+ K P+ S + WT +P LI+ Sbjct: 15 VFLYIFGISLILLVLITGVMVAFAIRFHRSRQPQPKEIPS---SCLWLEITWTLIPTLIV 71 Query: 101 IFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP 160 + + W+ +L P A + ++ V+ W W F+YP G T E+ PA P Sbjct: 72 LSMFWYGWQGYLSLTNVPPDA-----LPVKAVARQWSWSFVYP--GGRTSPELVVPAGRP 124 Query: 161 VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF 220 V + S V++S +IP + A+ GM T + A E GT+D Y G + M Sbjct: 125 VRIAIVSEDVLHSLYIPAFRIKKDAVPGMTTHVWFRAPETGTFDLFCTEYCGLAHASMIT 184 Query: 221 KA-IATPDRAAFDQWVAKAK 239 + +PD AF W+ K + Sbjct: 185 SVEVLSPD--AFADWLQKPQ 202 >UniRef50_A9F508 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F508_SORC5 Length = 316 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%) Query: 50 LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIII--FLAVL 106 + I+V A+++ FA KYR ++ K SP HS VE VVWT +P+ I+I F L Sbjct: 38 IFFILVTGAVVL---FALKYRRRSERDKTSPI-DHSTTVE-VVWTLIPLAIVIALFFVGL 92 Query: 107 TWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVT 166 ++ P++ I V + W F YP+ G TVNE+A P PV ++ Sbjct: 93 RGYVHASVAPAESYE-------INVTGEMYMWTFTYPD-GTTTVNELAVPRGRPVRLIMS 144 Query: 167 SNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATP 226 S +++SF+IP + + G T L A E + Y G G S M + Sbjct: 145 SKDILHSFYIPEFRVKQDVVPGSYTSLWFEATETRETVLLCTEYCGSGHSDM-LATVKVL 203 Query: 227 DRAAFDQWV 235 +++ F++W+ Sbjct: 204 EQSDFEKWL 212 >UniRef50_A4WYS2 Cytochrome-c oxidase n=7 Tax=Alphaproteobacteria RepID=A4WYS2_RHOS5 Length = 378 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 2/107 (1%) Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQ-GIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 P H ++ +T+ + W+W F Y ++ + T + + PA P+ ++TS V++ F++P Sbjct: 258 PRDHPDR-VTVRAEARQWEWRFGYEDRPDLETRDILHIPAGRPIDVEITSLDVIHGFWVP 316 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA 224 RL ++ A+ G L + A PG Y G+SA +SGPG+ F A Sbjct: 317 RLAGKMDAIPGHVNILRIEARRPGDYAGVSAEFSGPGYRTHHFTVRA 363 >UniRef50_A5PDP5 Putative cytochrome c oxidase chain II protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDP5_9SPHN Length = 352 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 27/219 (12%) Query: 29 LLDPKGQIGLEQRSLILTAFGL---MLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 +LDP G + +L + FGL + +VV+ A+ +A+ K W Sbjct: 16 VLDPAGPYSGKVTTLAWSLFGLGAFVTLVVVFALWVAI-------------KGPDKWKTK 62 Query: 86 NKVEAVVWTVPILI--IIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI-Y 142 E +W + I+ A+L W T ++P+ DE + I + W WF + Y Sbjct: 63 LGGERAIWLGGVAFPGIVLTALLVWGLTLTASLTEPIRGDE--MRIRITGEMW-WFRVQY 119 Query: 143 PEQGIATV----NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIAN 198 + A + NEI P PV ++ S V++SF++P L + + G +T L + A+ Sbjct: 120 LDASGAVLMEDANEIHIPVGRPVVLELESADVIHSFWVPHLSGKKDMIPGRRTLLRIEAD 179 Query: 199 EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 G Y G+ A Y G + M F A+A D F +W A+ Sbjct: 180 RAGEYGGVCAEYCGRQHALMGFVAVAH-DDGDFREWYAE 217 >UniRef50_Q11EK7 Cytochrome c oxidase, subunit II n=3 Tax=Rhizobiales RepID=Q11EK7_MESSB Length = 330 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 35/286 (12%) Query: 7 NKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLML-IVVIPAILMAV 63 + G + L + LSGC+ + L P G L L TA G+ + + ++ +LMA+ Sbjct: 2 RRGAGRVVLLSIASALSGCSGVQSALSPSGVEALRIDPLFWTATGVSVAVTLMVVVLMAL 61 Query: 64 GFAWKYRASNKDAKYSP----NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 A Y P +W ++V ++ +L I+ L L ++ Sbjct: 62 ------------ALYGPPRWRSWLGGDRV--IIGGGVVLPIVVLTGLFIYGLFVMQAGAV 107 Query: 120 LAHDEKPITIEVVSMDWKWFFIY--PE-QGIATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 + E T+ ++ W W +Y P+ + I + NE+ PA PV ++ S++V++SF+ Sbjct: 108 RSAREGEATVTIIGKLWWWEVVYQGPDGEEIVSANELRLPAGRPVRLRLESDNVIHSFWA 167 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQWV 235 P++ ++ + G + + A PG G A Y G + M F +A PD +D W+ Sbjct: 168 PQIAGKLDMIPGRTNEVVVEATAPGISRGQCAEYCGGAHALMAFYVVAMAPDE--YDAWL 225 Query: 236 AK-AKQSPNTMSDMAAFEK-------LAAPSEYNQVEYFSNVKPDL 273 A+ A +P +++ A + + E + PDL Sbjct: 226 AREAGPAPEPLTEGEARGRQVFLENGCGGCHQVRGTEARGRIGPDL 271 >UniRef50_C5CVJ0 Cytochrome c oxidase, subunit II n=1 Tax=Variovorax paradoxus S110 RepID=C5CVJ0_VARPS Length = 314 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 5/113 (4%) Query: 127 ITIEVVSMDWKWFFIY--PEQG--IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 + + V W W Y P G + T NEI P PVYF + S V++SF++P LG + Sbjct: 98 LIVGVTGHMWWWEVRYRDPASGAEVVTANEIRIPVGRPVYFGLGSADVIHSFWVPSLGGK 157 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 + + G L L A PGT+ G A Y G + M +A + AAFD W+ Sbjct: 158 MDMLPGRVQHLLLQAGRPGTWRGQCAEYCGEQHARMALHVVAE-EPAAFDAWL 209 >UniRef50_D0MDE2 Cytochrome c oxidase subunit 2 n=3 Tax=Rhodothermaceae RepID=D0MDE2_RHOM4 Length = 316 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 8/160 (5%) Query: 80 PNWSHSNKVEAVVW-TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKW 138 P KV + W VP ++++ + ++ + + P A++ I V W W Sbjct: 62 PEPVQEKKVVELAWIVVPTILVLIVFAWGFRVYIKMYTAPPDAYE-----ILVHGYQWYW 116 Query: 139 FFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIAN 198 F YP G+ T NE+ PA PV ++TS V++SF++P + + + L A Sbjct: 117 EFEYP-NGVKTTNELHVPAGQPVKLRMTSADVIHSFYVPAFRVKQDVLPDRYSALWFEAT 175 Query: 199 EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 +PG Y Y G +GM K I P R F+QW+ A Sbjct: 176 KPGEYTVFCTEYCGTQHAGMLAKVIVHP-REEFEQWLESA 214 >UniRef50_A5GCS3 Cytochrome C oxidase subunit II, transmembrane region n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GCS3_GEOUR Length = 311 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 12/206 (5%) Query: 34 GQIGLEQRSLILTAF--GLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAV 91 GQ+ E +L + GL ++ L + FA +YR + + + N++ Sbjct: 10 GQLAEEVDALFIFILLVGLFFFLITQGAL--IWFAVRYRKRKGEKEPDTPYITGNRLLET 67 Query: 92 VWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV 150 VW V P +I+ + + + + P + I V + W + F YP+ G V Sbjct: 68 VWVVVPSFLILAIFIYGYLVFRDIRTPPPGTAE-----INVTARQWLYLFKYPD-GRTAV 121 Query: 151 NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASY 210 NE+ P PV F +TS V++ F++P + + G T L L + G YD Y Sbjct: 122 NEVRVPQGKPVRFIMTSADVIHGFYLPEFRLKQDILPGSYTSLWLQPEKEGKYDIYCTQY 181 Query: 211 SGPGFSGMKFKAIATPDRAAFDQWVA 236 G G S M+ I P+ + +W+A Sbjct: 182 CGTGHSTMRAVMIVMPEE-EYREWLA 206 >UniRef50_Q2YBV3 Cytochrome c oxidase, subunit II n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YBV3_NITMU Length = 353 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 43/199 (21%) Query: 124 EKPI-TIEVVSMDWKWFFIY----PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 E P+ T+ V DW W Y P + T NEI P PV K+ S V+++F++P Sbjct: 136 ETPVLTLTVTGYDWWWNIEYEHGDPAKRFVTANEIHIPVGRPVLLKLKSADVIHAFWVPV 195 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 L + + G+ + + A+ PG Y G A + G + M + IA DR F++W Sbjct: 196 LAGKTQMIPGLVNQKWIQADVPGIYAGQCAQFCGAAHAHMNLEVIAESDR-DFEKWQEAQ 254 Query: 239 KQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHS 298 +++ AF SE+N+ HG + M + G H+ Sbjct: 255 RRT--------AFPV----SEHNE---------------------HGYKLFMDRCGGCHA 281 Query: 299 AH----EGMEGMDMSHAES 313 EG+ G D++H S Sbjct: 282 VRGTEAEGLHGPDLTHLNS 300 >UniRef50_Q0BPU5 Cytochrome c oxidase subunit 2 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPU5_GRABC Length = 300 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 30/228 (13%) Query: 50 LMLIVVIPAILMAVGFAW-KYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLT 107 +M+I+ + +A W YR S K SH +E + WT +P LI+ +A+ + Sbjct: 71 IMVIITAIVVFVAALLGWCAYRFSAKRNPVPSRTSHHTWLE-IAWTLIPALILAVIAIPS 129 Query: 108 WKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV----------------- 150 ++ + + + H+ +T++V + W W + YP+ GI ++ Sbjct: 130 FRLVYYEDRT----HNPD-VTLKVTAHQWYWEYGYPDNGIDSIESRVIQDGDLKPDQIRL 184 Query: 151 ----NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 N++ P V VTS V++SFFIP LG Q YA+ G ++PG Y G Sbjct: 185 LSVDNQVVVPYGKNVRVLVTSADVIHSFFIPSLGVQRYAIPGRTIETWFRVDKPGVYYGE 244 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKL 254 G S M A+ F +W K ++++ A + + Sbjct: 245 CNQICGAFHSQMPI-AVKAVSPEEFQKWAESQKTKKTSLNNTPAGQTI 291 >UniRef50_A8IDL7 Cytochrome c oxidase subunit 2 n=29 Tax=Alphaproteobacteria RepID=A8IDL7_AZOC5 Length = 313 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 30/220 (13%) Query: 45 LTAFGLMLIVVIPAILM--AVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIII 101 + +F L+V+I +I++ V A N+ A P+ + N + V WTV P++I++ Sbjct: 80 IRSFNTFLLVIISSIVLFVLVLLAICIVRFNEKANPVPSKTTHNTLLEVAWTVVPVMILV 139 Query: 102 FLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--------------- 146 +A+ +++ H LE P E +T++V W W + YP+ G Sbjct: 140 AIAIPSFRLLH-LELHTP----EPDMTVKVTGHQWYWSYEYPDNGGFGFDSLMVAEKDLK 194 Query: 147 ------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 +A NE+ P N V VTS V++SF +P G +I A+ G A + Sbjct: 195 PGQPRLLAVDNEVVVPVNKVVRIHVTSADVIHSFAVPSFGVKIDAIPGRLNESWFKATKE 254 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 G Y G + G + M A+ + FD W+A+AKQ Sbjct: 255 GVYYGQCSELCGRDHAFMPL-AVRVVSQQDFDAWLAQAKQ 293 >UniRef50_C8SJH9 Cytochrome c oxidase, subunit II n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SJH9_9RHIZ Length = 355 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 25/239 (10%) Query: 11 GWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILT---AFGLMLIVVIPAILMAVGF 65 G L++ G+ LL GC + LDP G+ L T G++ +V + +L+A+ Sbjct: 103 GPLAVIVGSALLPGCAGVQSALDPHGEQADTLAVLFWTFMAVLGVVWLVTMAGLLLAL-- 160 Query: 66 AWKYRASNKDAKYSPNWSHSNKVE-------AVVWTVPILIIIFLAVLTWKTTHALEPSK 118 +D++ P V+ A + T +I+ LA+L++ A+ Sbjct: 161 -----THRRDSRGEPAEGARPAVKRPMLIAFAAMLTSTTIILSGLALLSFGGQRAIFADG 215 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYP-EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 + I V W W Y G T NEI P +PV K+ + V++SF+IP Sbjct: 216 AAGA----LAISVTGHQWWWQVRYEGNDGFETANEIRIPVGSPVDIKLATADVIHSFWIP 271 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 L ++ + G L + A++PG Y G A + G + M +A + F +W A Sbjct: 272 SLAGKLDLIPGKSNELRIEASKPGIYRGQCAEFCGQQHAHMAIFVVAL-EPNDFQRWRA 329 >UniRef50_A8LTQ3 Cytochrome c oxidase subunit II n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LTQ3_DINSH Length = 345 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 14/193 (7%) Query: 92 VWTVPILI-IIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--IA 148 VWT ++ +I ++ + +T AL + A D + IEV + W +Y G + Sbjct: 97 VWTGGVITPLIAISTVMVASTAALVATTRPAPDA--LVIEVTGYQFWWDVVYDPDGTPLR 154 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 NE+ P PV ++ SN V++SF++P + ++ + G L + A E G + G A Sbjct: 155 DANELILPEGRPVTLRLNSNDVIHSFWVPSISGKMDMIPGRTNTLTITATETGQFRGQCA 214 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE--------KLAAPSEY 260 + G M F+ P AFD+W+A + + ++ A E AA E Sbjct: 215 EFCGLSHPKMAFEVTVLPPE-AFDKWLATTRGAARDVARPAQAEGREVFLSAGCAACHEI 273 Query: 261 NQVEYFSNVKPDL 273 V + PDL Sbjct: 274 RGVAEGGRLGPDL 286 >UniRef50_A9WF38 Cytochrome c oxidase subunit 2 n=3 Tax=Chloroflexus RepID=A9WF38_CHLAA Length = 330 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 10/199 (5%) Query: 38 LEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI 97 ++Q L A L+ V+P +++ + +Y S K + +P SN + WT+ Sbjct: 18 VDQLYFFLVALSLIFAGVLPFVILYL--IVRYHRSQKVDRSNP--VDSNLKLELTWTIIP 73 Query: 98 LIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPA 157 LI++ L V W ++ P A + + + V+ W W +P G NE+ P Sbjct: 74 LILVML-VFFWGAFLYVQMRTPPA---RTLDVYVIGKQWMWHVQHPN-GKRENNELHVPI 128 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 PV +TS V++SF+IP + + G T + A +PG Y A Y G S Sbjct: 129 GQPVKLIMTSQDVIHSFYIPAFRVKQDVLPGRYTIMWFEATKPGEYHLFCAEYCGTEHSL 188 Query: 218 MKFKAIATPDRAAFDQWVA 236 M + +A P A +++W+A Sbjct: 189 MIGRVVAMP-LADYERWLA 206 >UniRef50_C7P0B0 Cytochrome c oxidase subunit 2 n=3 Tax=Halobacteriaceae RepID=C7P0B0_HALMD Length = 249 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 27/212 (12%) Query: 51 MLIVVIPAILMAVGF----AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI-LIIIFLAV 105 +L V IP ++ G W++ +++ P + N+ + WTV +I++F+ V Sbjct: 44 LLYVAIPITVLVEGILIYTVWRFSKNDE-----PLPTMENRRLEITWTVATAIILLFVGV 98 Query: 106 LTWKTTH----ALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE--------- 152 +++ + ++ L E+P+ +EVV+ + W F Y T E Sbjct: 99 ASYQVMAEPMVTAQSTQQLDTSEEPLEVEVVAQKYAWTFNYNGTAANTSQEYSADNRLSN 158 Query: 153 ---IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 + PAN V VTS +++F +P L + AM G + E GTY A Sbjct: 159 GGTLVLPANRTVRLSVTSTDWLHAFHVPGLALKQDAMPGQHNTIQTRVTETGTYQLYCAE 218 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 Y G G S M + P + + WV + S Sbjct: 219 YCGSGHSQMLGEVRVLP-QDEYQNWVEDQQSS 249 >UniRef50_Q2JUD7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechococcus RepID=Q2JUD7_SYNJA Length = 342 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 43/228 (18%) Query: 42 SLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILII 100 S I A G+ L+V +L+ ++ R ++ PN H N + +VWT VP +II Sbjct: 47 STITIATGIFLVV--EGVLLYCAIRYRKRRGDR-GDGDPN--HGNVLLEIVWTAVPAVII 101 Query: 101 IFLAVLTWK----------------TTHALEPSKPLAHDE----------------KP-I 127 ++L + + T A+EPS+ A + +P + Sbjct: 102 LWLGLASLDVYQAVYGGADVGGHIHTAMAMEPSQDSAAGDPDYAYTPALLPGKEMGQPEL 161 Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 ++V M + W F YPE G+ E+ P N V +T+ V ++F++P+ + + Sbjct: 162 VVQVQGMQYAWVFTYPESGL-VAGELHLPLNKRVRLNMTALDVNHAFWVPQFRLKQDLIP 220 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQW 234 G +T L + + GTY + A GP M + I TP+ F++W Sbjct: 221 GRETHLEFVPTQLGTYPIVCAELCGPYHGVMAGQLIVETPEE--FERW 266 >UniRef50_B1M0S7 Cytochrome c oxidase, subunit II n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M0S7_METRJ Length = 329 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 7/180 (3%) Query: 39 EQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPIL 98 E LIL L L++ +P + FA +YR +A SP+ SN +E +P L Sbjct: 21 ETDLLILAFTVLTLLLTVPVFVAITYFALRYR-EGSEADRSPSGIRSNLIEISWMLIPFL 79 Query: 99 IIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPAN 158 + + V W ++ P + +E + W W F +P G + +N + P Sbjct: 80 LTLIFFV--WGARLFIQSKNP---PPDAMVVEAIGRQWMWKFQHPT-GQSEINNLHLPIG 133 Query: 159 TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM 218 P+ + S V+++ ++P + Q+ A+ T L A++ GTY + Y G S M Sbjct: 134 QPIRLHIISQDVIHALYLPAVRMQVAALPDRYTDLWFKADKVGTYHLYCSEYCGTDHSVM 193 >UniRef50_Q01R98 Cytochrome c oxidase, subunit II n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R98_SOLUE Length = 322 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 10/197 (5%) Query: 48 FGLML--IVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAV 105 FGL+L I VI L ++R ++A + + + V I + +++ Sbjct: 23 FGLLLGIIFVIVVGLALFSLRRRHRGIEQEALEGSHQASERTDGRLRMVVGIATALTVSI 82 Query: 106 LTWKTTHALEPSKPLAHDEKP---ITIEVVSMDWKWFFIY----PEQGIATVNEIAFPAN 158 L T ++ K ++ P + IEV W W Y P + I T NEI P Sbjct: 83 LFGLTIVSVSVGKSISASAAPANSLLIEVTGAQWWWKIRYANDDPSRIIETANEIHIPTG 142 Query: 159 TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM 218 PV + T++ V++SF++P L + + G T + A++PG Y G A + G + M Sbjct: 143 RPVAIRGTADDVIHSFWVPSLQGKRDLIPGRTTLEWMQADQPGEYRGQCAEFCGLQHAHM 202 Query: 219 KFKAIATPDRAAFDQWV 235 F IA P + F+ W+ Sbjct: 203 AFWVIAEPPQ-QFNHWM 218 >UniRef50_Q5V3P5 Cytochrome c oxidase subunit 2 n=1 Tax=Haloarcula marismortui RepID=Q5V3P5_HALMA Length = 240 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 101/253 (39%), Gaps = 39/253 (15%) Query: 1 MRLRKYNKSLGW----LSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 MRLR+ G LSL A V N A +D + L+ A L L V + Sbjct: 1 MRLRRRVLQAGLVVVGLSLLAAPVTAQSVNRAAIDDLNE------QLLYVALPLTLFVEL 54 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVP---ILIIIFLAVLTWKTTHA 113 + + YR N D P + + V WT IL+ + ++ Sbjct: 55 TLVYVI------YRFRNND---DPKPTVDDPALEVTWTAATGAILVFVGVSAFVVMANPY 105 Query: 114 LEPSKP---------LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFK 164 + P+ A D + I+V++ W W F Y E + T + PA+ V F+ Sbjct: 106 ITPAAAEASAGGGDAFAEDTQ---IDVLAYQWGWEFSYGEASVTTEERLVLPADKNVTFR 162 Query: 165 VTSNSVMNSFFIPRLG--SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKA 222 + + V+++ +IP+LG I+ M R H A EPG Y A G G S M Sbjct: 163 LRTTDVIHAIYIPQLGVKQDIFPGRTMTARTH--ATEPGEYRLYCAEMCGAGHSKMD-AT 219 Query: 223 IATPDRAAFDQWV 235 + +++ +D W+ Sbjct: 220 VVVKNQSGYDAWM 232 >UniRef50_D2X915 Cytochrome c oxidase subunit II n=1 Tax=Sorangium cellulosum RepID=D2X915_SORCE Length = 387 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 11/194 (5%) Query: 45 LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS-PNWSHSNKVEAVVWTVPILIIIFL 103 +T G L+ + A LM +YR +D + P + + V V LI++FL Sbjct: 33 VTMAGATLVALFAAYLMI-----RYRRRQRDVEGPFPGATARPPLLLEVGMVLGLIVLFL 87 Query: 104 AVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYF 163 W + ++ P+ + V W W F YPE G ++V + PA PV Sbjct: 88 ---VWWVIGMRQYAELRVAPADPVVVYVTGKQWMWKFAYPE-GPSSVATLYVPARRPVKL 143 Query: 164 KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAI 223 +TS V++SFF+P + + G T L A PG Y + Y G S M+ + I Sbjct: 144 VMTSRDVIHSFFVPDFRIKYDVVPGRYTTLWFEATAPGAYQILCTEYCGTNHSTMRGEVI 203 Query: 224 ATPDRAAFDQWVAK 237 A + + F +W+++ Sbjct: 204 AL-EPSDFARWLSE 216 >UniRef50_Q6KZG1 Cytochrome c oxidase polypeptide II n=1 Tax=Picrophilus torridus RepID=Q6KZG1_PICTO Length = 272 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 47/270 (17%) Query: 30 LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK-- 87 L PKG I + + I A+ ++P I++ GFA+ Y + NW H K Sbjct: 15 LIPKGSISGDLITSIFLAY------ILPGIVIGAGFAFWYIYV-----FIRNWDHIKKKP 63 Query: 88 -----------VEAV------VWTVPIL--IIIFLAVLTWKTTHAL-------EPSKPLA 121 +EA+ ++ V +L ++I L+++ + A PS P Sbjct: 64 EEHEDDMRPGRIEAIERGNKTLFKVFVLFVVLILLSLMVYDLPPAYGVRVAGAAPSAP-T 122 Query: 122 HDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGS 181 + + I+V+ W+W FIYP G +T + PA+TP+ F VTS VM+SF++ + + Sbjct: 123 DNHHYMYIDVIGYQWQWIFIYP-NGSSTRHFAVLPADTPIQFNVTSVDVMHSFYLINV-T 180 Query: 182 QIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 ++ A G + PG Y G G + M+ P + ++QW ++KQ Sbjct: 181 KVDAFPGHYNFIWTNITTPGLYYFECVELCGLGHAHMRGPVAVIPLK-QWEQW--ESKQK 237 Query: 242 PNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 P M+ F+ Y Y + P Sbjct: 238 PGEMNQ--TFDFFGICQSYGGNRYDGGITP 265 >UniRef50_Q1J1C4 Cytochrome c oxidase subunit 2 n=2 Tax=Deinococcus RepID=Q1J1C4_DEIGD Length = 435 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 23/223 (10%) Query: 20 VLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW-------KYRAS 72 LL+GC S L G + IL + + + +I++ VG +W K+R Sbjct: 53 ALLTGCQSQQLLTLGDMSSAYNREILW---MSIPAIALSIIIFVGVSWALFYTVRKFREE 109 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVV 132 N DA + + +N++E ++ VP++I++ L+VL ++ L P+ D + I+V+ Sbjct: 110 NNDAPPA-QFHGNNRLETILVVVPVIIVMLLSVLAVRSLARL---NPVPQDAE--KIDVL 163 Query: 133 SMDWKWFFIYPEQ------GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + W F YP + NE+ P +TS V+++F+ P LG Q A Sbjct: 164 GKQFWWNFSYPGAPAAAGGNVTNGNELVLPTGKWASLTITSGDVIHAFWAPNLGGQRDAT 223 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDR 228 G Q + + G Y G G + M+FK IA PDR Sbjct: 224 PGTQKTWQIQTDRAGVYQGNCNVLCGASHANMRFKVIALPPDR 266 >UniRef50_B0C0A3 Cytochrome c oxidase subunit 2 n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C0A3_ACAM1 Length = 328 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 49/261 (18%) Query: 42 SLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILII 100 S++ A GL LIV L+ FA++ R S+ P H N +VWT +P +++ Sbjct: 48 SMMAIATGLFLIV--QGALLYSLFAFR-RKSDDQTDAEP--VHGNVPLEIVWTAIPAMLV 102 Query: 101 IFLAVLTWKTTHALEP-----SKPLAHDE------------------------------- 124 ++L + ++ +++ S +AH Sbjct: 103 LWLGIYSFDVYQSIDSVGTMGSHNMAHQHGDMERVADADAATMVTDQGQMPSGALSQAVA 162 Query: 125 ----KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 +P+ + V + + W F YP+ GI + E+ PAN PV +++ V+++F++P Sbjct: 163 TETVEPLQVNVDGLQYAWLFTYPDTGIIS-GELHLPANRPVTLNISARDVIHAFWVPEFR 221 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 + A+ G T L+ + G Y I A G MK ++I A + WV ++ Sbjct: 222 LKQDAVPGQVTHLNFQPTKEGVYPVICAELCGAYHGAMKTRSIVH-SGAEYQAWV-DSQL 279 Query: 241 SPNTMSDMAAFEKLAAPSEYN 261 NT + A +P E++ Sbjct: 280 VANTSRETVAQSVTKSPLEHH 300 >UniRef50_D1YAK0 Cytochrome c oxidase subunit 2 n=3 Tax=Propionibacterium acnes RepID=D1YAK0_PROAC Length = 302 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 31/243 (12%) Query: 4 RKYNKSLGWLSLFAGTVLLSGCNS---------ALLDPKGQIGLEQRSLILTAFGLMLIV 54 R K+ G + V LSGC S L+DP + ++ + A+ L++ Sbjct: 21 RAAGKAGGICAAVIAVVALSGCGSTGPGRAARLGLVDPASDRAVHMGNMWIGAWVAALVI 80 Query: 55 VIPAILMAVGFA-WKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHA 113 + + +GFA +K+R + D + +E + VP L+I L T +T Sbjct: 81 GV-FVWGLIGFAAFKFRRKDGDPAIPRQSRYHLPLEVLYTIVPFLVIGVLFFYTVRTE-- 137 Query: 114 LEPSKPLAHDEKPI-TIEVVSMDWKWFFIY-----PEQGIATVNEIA---------FPAN 158 +K L D P + VV W W F Y P+ G +E+ P N Sbjct: 138 ---NKVLDKDPDPQHVVNVVGQKWSWTFNYMEANNPDAGGVVTHEVGTIEKIPDLYLPVN 194 Query: 159 TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM 218 V F++ S V++SF++P ++ + G + L + G YDG A G + M Sbjct: 195 QSVRFRLKSADVIHSFWVPAFYFKMDVIPGHPNQFDLTPTKIGVYDGKCAELCGTYHANM 254 Query: 219 KFK 221 FK Sbjct: 255 IFK 257 >UniRef50_Q7NIL9 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobacter violaceus RepID=Q7NIL9_GLOVI Length = 308 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 30/245 (12%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW 93 GQI R +++ A G+ L V +L+ F +K RA + D PN H N ++W Sbjct: 44 GQIDGLFRFMLIIATGIFLGV--QGVLLYSAFVFK-RAKD-DMGDGPNM-HGNLRLEILW 98 Query: 94 T-VPILIIIFLAVLTWKTTHALEPSKPL---AHDEK------------------PITIEV 131 T +P ++++L++ +++ + S P+ AH E P+ I V Sbjct: 99 TAIPTALVLYLSIYSFEVFQLMGASSPMGGGAHHEDSGLPIRFQATNPDPAAPPPLIIAV 158 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 ++ + W F YP V+E+ P PV + SN V+++F++P + + G T Sbjct: 159 EAVQYAWIFSYPGSE-TQVSELHLPIGRPVRMDMKSNDVIHAFWVPEFRLKQDVIPGRTT 217 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 ++ + G Y A G GM I D+ D W+ K++ S T + +A Sbjct: 218 QVSFTPTKAGKYQLRCAELCGAYHGGMVVDVIVE-DKKDVDAWL-KSQASLGTSTRVAQL 275 Query: 252 EKLAA 256 AA Sbjct: 276 ADPAA 280 >UniRef50_Q1H1C0 Cytochrome c oxidase subunit 2 n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H1C0_METFK Length = 346 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 22/235 (9%) Query: 16 FAGTVLLSGCNSALLDPKGQIGLEQRSL---ILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 F L + N + L P+G + L ++ GL+L +V+ + +A+ RA Sbjct: 25 FMCICLPADANQSALQPEGPLAKVVADLFWGMVAVGGLILFIVLAMLAVAL-----LRAR 79 Query: 73 NKDAKYSPNWSHSNK---VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 N ++ S + VV +P LI+ + + + P E +TI Sbjct: 80 NNAEPRPLTFTQSRNLVFISGVV--IPALILTVFVISSAAVNREIVAPMP----EHALTI 133 Query: 130 EVVSMDWKWFFIYPE-QG---IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 +V W W Y + +G T NEI P PV + ++ V++SF+IP+L + Sbjct: 134 KVTGHQWWWEVDYLDTEGNHVAKTANEIRIPVGKPVRIALEASDVIHSFWIPQLNGKTDM 193 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 + G + + A++PG+Y G + G + M F A P+ F+ W+ + Q Sbjct: 194 VPGKRNLTWVQADQPGSYRGQCTEFCGKQHAKMAFTVDAVPEE-DFETWLQRQAQ 247 >UniRef50_A8TIJ6 Cytochrome c oxidase subunit 2 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIJ6_9PROT Length = 283 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 41/234 (17%) Query: 50 LMLIVVIPAILMA--VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVL 106 L++I +I ++A V ++RAS +H +E V WT +P++I++ +A+ Sbjct: 60 LVIITLITVFVLALLVYVCVRFRASRNPVPSKT--THHTWLE-VAWTGLPVVILVLIAIP 116 Query: 107 TWKTTH----ALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA-------------- 148 ++K + A++P +TI+V + W W + Y +Q +A Sbjct: 117 SFKLLYYADRAVDPD---------MTIKVQAHQWYWSYEYLDQQVAFDSNLIPEADLKPG 167 Query: 149 ------TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 N + P V +TS+ VM+SFF+P G Q+Y+ G ++ G Sbjct: 168 QLRLLEVDNRLVVPVGKKVQVLITSSDVMHSFFMPSFGVQLYSTPGRTNETWFQVDKAGV 227 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 Y G G + M + + AA+D W+ +AK + M D AA +LAA Sbjct: 228 YYGQCNQICGVNHAYMPI-VVEAMEPAAYDAWLVQAK-TKFAMDDSAASPRLAA 279 >UniRef50_B2J6R2 Cytochrome c oxidase subunit 2 n=6 Tax=Nostocaceae RepID=B2J6R2_NOSP7 Length = 361 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%) Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + + V + + W F YPE GI T E+ P V +T+N V+++F++P + A+ Sbjct: 208 LQVNVTGLQYAWIFTYPETGI-TTGEMHVPIGREVQISMTANDVIHAFWVPEFRLKQDAI 266 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 G Q+ + + G Y I A GP M+ + P + AFD+W+ + Sbjct: 267 PGRQSEIRFTPQKAGDYTLICAELCGPYHGAMRAPVVVEP-QEAFDKWMQE 316 >UniRef50_Q46SU8 Cytochrome c oxidase, subunit II:Cytochrome c, class I:Cytochrome C oxidase subunit II, transmembrane region n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46SU8_RALEJ Length = 316 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 17/209 (8%) Query: 42 SLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIII 101 +L+L+ L+ +V + ++ G +Y + P + NK + WT I +++ Sbjct: 21 TLMLSLTALLCVVALAVLVAIAGSVIRYHEHRPADRSHPPLA--NKPLEIAWTT-IPLLV 77 Query: 102 FLAVLTWK----TTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPA 157 FL + W T A E + L P+T VV+ W W + G +NE+ P Sbjct: 78 FLGIFAWAAHDYTLLAQETAGAL-----PVT--VVARQWMWKLEH-ANGKREINELHVPL 129 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 V +TS V++SF++P + + G T L A G Y A Y G + Sbjct: 130 GQAVQLTMTSQDVIHSFYVPAFRIKQDVVPGRYTTLRFTATHAGVYRLFCAEYCGTDHAA 189 Query: 218 MKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 M+ + + P A F +W+ A P T + Sbjct: 190 MQGRIVVMPP-AEFARWL-DADVGPETTA 216 >UniRef50_D1CCH9 Cytochrome c oxidase, subunit II n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCH9_THET1 Length = 342 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 77/184 (41%), Gaps = 9/184 (4%) Query: 50 LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWK 109 L ++ I ++ V FA +YR + + Y P N + W V I +I LA W Sbjct: 21 LSALIAIGVFILIVVFATRYR--RRYSGYVPPAIEGNNRLEIAWIV-IPTVIALATFAWA 77 Query: 110 TTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNS 169 + P + +TI VV W W P G NE+ P PV +TS Sbjct: 78 AVVYVHMHNP---PKDALTIYVVGRQWMWKAQQPT-GQWENNELHVPVGKPVKLVMTSQD 133 Query: 170 VMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM--KFKAIATPD 227 V++ FF+P + + G T + A +PG YD A Y G S M K A++ D Sbjct: 134 VIHDFFVPAFRVKQDVIPGRYTTMWFTAEKPGVYDLFCAEYCGTNHSEMIGKVYALSQQD 193 Query: 228 RAAF 231 A+ Sbjct: 194 YEAW 197 >UniRef50_C5CCB5 Cytochrome c oxidase subunit 2 n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CCB5_MICLC Length = 286 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 28/188 (14%) Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 YR D + +++ +E + +PIL+++ W T+ ++ D+ P+T Sbjct: 63 YRRRKNDQGFPKQTAYNVPLETMFTAIPILMVVTF----WGFTNRVQTEVDRPVDDSPLT 118 Query: 129 IEVVSMDWKWFFIYP-EQGIATVNE----------------------IAFPANTPVYFKV 165 + V W W F Y EQ V E + P + PV+F++ Sbjct: 119 VTVYGKQWSWDFNYSYEQENGEVIEAHYSGIQAQLDGTEGVRDTLPVLYLPNDVPVHFEL 178 Query: 166 TSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIAT 225 S V +SF+IP+ + + G L+L E G+YDG A G S M F + Sbjct: 179 KSRDVAHSFWIPQFLQKRDMVPGKTNHLYLTPQELGSYDGKCAELCGESHSEMLFN-VEV 237 Query: 226 PDRAAFDQ 233 D A F Q Sbjct: 238 VDEAEFVQ 245 >UniRef50_B4RAU6 Cytochrome c oxidase, subunit II n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RAU6_PHEZH Length = 327 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 11/161 (6%) Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP--ITIEVVSMDWKW 138 W E ++W+ + + I VLT + L ++ L+ +P + + V W W Sbjct: 64 EWRDRLGREWLIWSAGLALPIV--VLTGVLIYGLTATQALSQAPQPGEMRVRVTGEMWWW 121 Query: 139 FFIYPEQ----GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 Y + I NE+ PA PV ++ + V++SF++PRL ++ + G + L Sbjct: 122 RVAYLDAEGRPAIHDANELHIPAGVPVTLELEAADVIHSFWVPRLAGKLDMIPGRRNILR 181 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQW 234 + A+ PG Y G A Y G + M F +A P+ F +W Sbjct: 182 IQADRPGVYGGQCAEYCGGPHALMGFVVVAHAPED--FQRW 220 >UniRef50_A5G0I4 Cytochrome c oxidase subunit 2 n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0I4_ACICJ Length = 316 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 41/199 (20%) Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDE-- 124 ++RAS + +H+ +E V+WTV P L+++ + V PS L +++ Sbjct: 86 RFRASKHPVATTT--THNTLIE-VIWTVVPALLLVVIFV----------PSLNLIYEQSN 132 Query: 125 ---KPITIEVVSMDWKWFFIYPEQG---------------------IATVNEIAFPANTP 160 + +T++V W W + YP ++ + + PAN Sbjct: 133 YTHRYMTVKVTGHQWYWEYDYPAAKGVDFTSYPIPDNQIKPGQIARLSADHPLVLPANEK 192 Query: 161 VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF 220 + FK+TS V++SFFIP LG Q YA+ G + PG Y G G M Sbjct: 193 IVFKITSADVLHSFFIPSLGVQRYAIPGQYWHQWTKIDAPGIYYGECNQICGMNHDNMPI 252 Query: 221 KAIATPDRAAFDQWVAKAK 239 + +A P + F W+A+AK Sbjct: 253 EIVALPLK-QFKAWLAEAK 270 >UniRef50_C6B8H8 Cytochrome c oxidase, subunit II n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B8H8_RHILS Length = 318 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%) Query: 39 EQRSLILTAF-GLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI 97 +Q + AF L+L + P ++ + FA KYR + P ++E + W++ + Sbjct: 18 QQVDIFAIAFSALILAMAGPVFILIIVFAIKYRRGKPANRVHPP-KRDLRLE-LSWSI-L 74 Query: 98 LIIIFLAVLTWKT----THALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEI 153 + L W T T P+ L I+VV+ W W F +PE G +NE+ Sbjct: 75 PSLCLLGFFGWSTALFATRYFPPANAL-------DIDVVAKQWMWKFQHPE-GQGEINEL 126 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 P + PV + S V++S F+P L + + G T + ++ GT+ A + G Sbjct: 127 HVPVDQPVKLTMASQDVIHSLFVPALRLKQDVVPGRYTVMWFTPDKVGTFRLTCAEFCGT 186 Query: 214 GFSGMKFKAIATPDRAAFDQWVAK 237 S M + I T A + +W+++ Sbjct: 187 DHSEMGGQIIVT-THAQYSRWLSR 209 >UniRef50_Q06474 Cytochrome c oxidase subunit 2 n=48 Tax=root RepID=COX2_SYNY3 Length = 332 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 6/139 (4%) Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 P+ ++V + + W F YPE GI + E+ P + PV + + V+++F+IP+L + Sbjct: 168 NPLMVDVKGIQYAWIFTYPETGIIS-GELHAPIDRPVQLNMEAGDVIHAFWIPQLRLKQD 226 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQWVAKAKQSPN 243 + G + L A+ PG Y I A G GMK A TP+ +D WVA +P Sbjct: 227 VIPGRGSTLVFNASTPGQYPVICAELCGAYHGGMKSVFYAHTPEE--YDDWVAANAPAPT 284 Query: 244 TMSDMAAFEKLAA--PSEY 260 M + A P+EY Sbjct: 285 ESMAMTLPKATTAMTPNEY 303 >UniRef50_C6XZ37 Cytochrome c oxidase subunit 2 n=2 Tax=Pedobacter RepID=C6XZ37_PEDHD Length = 408 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 103/250 (41%), Gaps = 60/250 (24%) Query: 42 SLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILII- 100 +LILT IV I ++ GFA+ Y+ S K Y + H+N +E V +P L++ Sbjct: 138 TLILTT-----IVFIATHILLFGFAYIYKHSGKRKAYY--YPHNNTLERVWTIIPALVLT 190 Query: 101 --IFLAVLTWKTT-HALEPSKPLAHDEKPITIEVVSMDWKWFFIYP-EQGIA-------- 148 + + LTW++ + +E + KPI+IE+ S + W YP GI Sbjct: 191 VLVLMGFLTWRSIFYKIEDP-----NNKPISIEITSSQFAWAIRYPGADGIVGLKNYKLI 245 Query: 149 -------------------TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 + +E+ P N PV +TS V++SF++P Q+ + GM Sbjct: 246 NSINALGIDFKDKNNLDDQSADEMVIPVNKPVRLILTSKDVIHSFYMPHFRVQLNTVPGM 305 Query: 190 QTRLHLI-----------ANEPG-TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 + N+P Y + G G M+ K + A ++ WV Sbjct: 306 TSYFEFTPTITTEEMKAKTNDPTFKYLFLCNKICGDGHYKMQ-KEVKVVSMAEYEAWV-- 362 Query: 238 AKQSPNTMSD 247 K+ P ++D Sbjct: 363 -KKQPAYLTD 371 >UniRef50_C1ZF25 Cytochrome c oxidase, subunit II n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZF25_PLALI Length = 330 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 10/236 (4%) Query: 12 WLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 WLS FA + + + S+ L +P E L + F L + + + + FA KY Sbjct: 2 WLSKFAVSFVPAQLTSSYWLPEPNSTFAPEVDGLFMFIFWLSVFFFVLIVGLGTYFALKY 61 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R P+ SH+ +EA +P +I + W ++ P E + Sbjct: 62 RRVGTTEVVVPSSSHNTALEATWSLIPTALI--FVIFGWGFVGFVDMRTP---PENAYEV 116 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 +V + W W F YP G +++ P + P +TS+ V++S FIP +++ + G Sbjct: 117 QVNAKKWAWNFTYP--GGLQDSDLHLPVDQPTILTMTSDDVIHSLFIPAFRAKMDVVPGR 174 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 +L + G Y G SGM K + ++ +A+ +++ + M Sbjct: 175 YNKLWFHPTKTGENVLFCTEYCGREHSGMNRKVFVY-EEGGVEKKLAEIQETMDKM 229 >UniRef50_A6GFM7 Cytochrome c oxidase subunit 2 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFM7_9DELT Length = 339 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 19/191 (9%) Query: 38 LEQRSLILTAF-GLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVP 96 L+ ++LTA G+ ++VI + F WKY+ ++D K SP +H+ K+E W+ Sbjct: 34 LDGLYILLTAVTGISFVLVIGTMFY---FMWKYKMKSEDDKTSP-LTHNGKLE-FAWSA- 87 Query: 97 ILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEI--- 153 I I + W ++ S P A I I V W W F YP + +A E+ Sbjct: 88 IPAIFLMVFFVWGELDFVKLSSPPADS---IDIHVTGQKWYWTFEYPGRPVAATTEVEDG 144 Query: 154 ------AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 P V +TS V++SF+IP + + G T + A E G + Sbjct: 145 EIAPLLVVPKGQAVRLTMTSKDVIHSFYIPAFRVKKDVVPGRYTYVWFEATELGDFPVFC 204 Query: 208 ASYSGPGFSGM 218 Y G S M Sbjct: 205 TEYCGDEHSSM 215 >UniRef50_Q93TC7 Cytochrome c oxidase subunit II (Fragment) n=1 Tax=Cyanothece sp. ATCC 51142 RepID=Q93TC7_CYAA5 Length = 191 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 7/152 (4%) Query: 123 DEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 D + ++V ++ + W F YPE GI + E+ P + PV + + V+++F++P+L + Sbjct: 27 DNPAVMVDVKAIQYAWIFTYPETGIVS-GELHVPIDRPVQLNIDAGDVLHAFWVPQLRLK 85 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 A+ G + L AN G Y I A G GMK + A+ QW ++S Sbjct: 86 QDAIPGREAVLAFTANREGDYPIICAELCGAYHGGMK-SVLHVDSPEAYAQW----EESN 140 Query: 243 NTMSDMAAFEK-LAAPSEYNQVEYFSNVKPDL 273 + + E + AP + + E+ S D+ Sbjct: 141 KPVQEAKIGETAMVAPKDMSDQEFLSPYAEDM 172 >UniRef50_A7H8L3 Cytochrome c oxidase subunit II n=7 Tax=Cystobacterineae RepID=A7H8L3_ANADF Length = 351 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 10/190 (5%) Query: 52 LIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI-LIIIFLAVLTWKT 110 +I L A+ F +YR + +P+ + EA+ VP+ L +++ A+ + Sbjct: 34 MIAAAGVFLTAIFFFVRYR-RRTGSDVTPHVAPRGIHEALFVGVPLALFLVWFAIGFPQY 92 Query: 111 THALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSV 170 P K + + V W W F Y G ++++ + PA PV +TS V Sbjct: 93 VKLQLPPK------DAMDVFVQGKKWMWKFAY-AGGPSSIDTLRVPAGRPVRLLITSRDV 145 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAA 230 ++SF++P L ++ A+ G T+ A + G Y+ Y G G S M + + P + Sbjct: 146 IHSFYVPALRVKMDALPGRYTQTWFQAEKAGRYEIFCTEYCGLGHSAMLGELVVMP-QEE 204 Query: 231 FDQWVAKAKQ 240 FD W+A+ ++ Sbjct: 205 FDVWIAEQRR 214 >UniRef50_A4WT84 Cytochrome c, monohaem n=9 Tax=Rhodobacteraceae RepID=A4WT84_RHOS5 Length = 324 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 15/195 (7%) Query: 89 EAVVWTVPIL--IIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 EAV+ IL +++ A+L W + + P E P + + +W W Y +G Sbjct: 76 EAVIIGGGILLPVVVLTALLAWGLSIMPDQRAP---GEGP-RVRITGEEWWWRVEYLPEG 131 Query: 147 IA----TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 A + NE+ PA ++ + V++SF++P LG + + G TR+ L PGT Sbjct: 132 AAGPVISANELRLPAGRRTEIELQAGRVIHSFWVPGLGGKTDMIPGRTTRMSLEPVTPGT 191 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWV--AKAKQSPNTMSDMAAF--EKLAAPS 258 Y G A + G + M A+ + F +W+ A P A F E A Sbjct: 192 YRGQCAEFCGASHALMALNAVVL-EEGDFARWLEAEAAPARPEEGEGRAIFFREGCGACH 250 Query: 259 EYNQVEYFSNVKPDL 273 V PDL Sbjct: 251 TIRGTPAAGAVGPDL 265 >UniRef50_D1ATW6 Cytochrome c oxidase subunit 2 n=9 Tax=Anaplasmataceae RepID=D1ATW6_ANACI Length = 297 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 32/195 (16%) Query: 70 RASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 R + +++ SH+ +E V+WT VP++I+ FL + K E P A I Sbjct: 111 RRKGEQVEFNNKNSHNVALE-VMWTLVPLVIVGFLTISNVKLIKK-EQQIPKAD----IV 164 Query: 129 IEVVSMDWKWFFIYPEQGI--------------------ATVNEIAFPANTPVYFKVTSN 168 I+ + W W ++YPE G+ N + P V + T+ Sbjct: 165 IKAIGYQWYWTYVYPESGVRFDSYMKPDSELESGELRLLEVDNRMVVPVGEVVLLQSTAG 224 Query: 169 SVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP--GFSGMKFKAIATP 226 V++S+ +P LG ++ A+ G + +PG Y G + G GF + +A+ Sbjct: 225 DVIHSWAVPALGIKVDAVPGRLNEVWFSVKKPGVYYGQCSELCGRLHGFMPIVVEAVT-- 282 Query: 227 DRAAFDQWVAKAKQS 241 R FD WVA+ K+S Sbjct: 283 -RDKFDAWVAQHKES 296 >UniRef50_A9IUK7 Cytochrome-c oxidase chain II/c n=2 Tax=Betaproteobacteria RepID=A9IUK7_BORPD Length = 328 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 12/150 (8%) Query: 99 IIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY-PEQG---IATVNEIA 154 +I+ A+L + A + A + IEV+ W W Y E G T NEI Sbjct: 86 VIVLSALLVYGLVVAAAMQR--AAEPAAARIEVMGEMWWWRVRYLDEHGRTLFETANEIR 143 Query: 155 FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPG 214 PA PV + S +V++SF++P L ++ + G RL + A +PG G A Y G Sbjct: 144 IPAGQPVDLLLGSRNVVHSFWVPNLAGKLDMVPGHINRLRIQARQPGVLRGQCAEYCGAQ 203 Query: 215 FSGMKF--KAIATPDRAAFDQWVAKAKQSP 242 + M F + +A P F W+ +A+Q P Sbjct: 204 HANMMFDVQVLAPPQ---FQDWL-RAQQQP 229 >UniRef50_B0RXK0 Cytochrome c oxidase subunit 2 n=13 Tax=Gammaproteobacteria RepID=B0RXK0_XANCB Length = 327 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 42/223 (18%) Query: 50 LMLIVVIPAILM-AVGFA-WKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVL 106 L + VVI A++ A+G+A +K+R S + +SH+ K E V+WTV P+L++I +A Sbjct: 60 LWVCVVIGALVFGAMGYAIFKFRKSK--GAVAAQFSHNTKAE-VLWTVIPVLVLIAMA-- 114 Query: 107 TWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV---------------- 150 W T L E +T++V W W + Y QG+ Sbjct: 115 -WPATAKLIAMYDTRESE--MTVKVTGYQWMWKYEYLGQGVEFTSRLARESDRIRQSGER 171 Query: 151 --------------NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 N + P +T + F +T++ V++++++P LG + A+ G+ Sbjct: 172 PTAASQPHYLLDVDNRLVLPVDTKIRFVITADDVIHAWWVPALGWKQDAIPGIVNEAWTN 231 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 +PG Y G A G M A P +A F +W+A + Sbjct: 232 IEKPGVYRGQCAELCGKDHGFMPIVVEALP-KAEFQRWLASRR 273 >UniRef50_Q04PG8 Cytochrome c oxidase subunit 2 n=7 Tax=Bacteria RepID=Q04PG8_LEPBJ Length = 333 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 30/244 (12%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 + WL+L T + S + ++ L L GL+ V++ I F +KY Sbjct: 1 MTWLNLITATSFMPVQASEVAK-----NVDNLYLFLLVSGLISFVIL--IGGMTWFIFKY 53 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 R + K + + N + +W+ +P++I+I + W+ L H++ + Sbjct: 54 RRKTEADKTA--YITHNTLAEFLWSFIPLVIMIVIFWWGWRIFADLRS----VHEKGDLE 107 Query: 129 IEVVSMDWKWFFIYPEQGIATV--------------NEIAFPANTPVYFKVTSNSVMNSF 174 I V + W+W F YP G+ V N I P +TS V++SF Sbjct: 108 IHVTARQWQWTFKYP-NGVTVVSPNATEKLNTLFQPNGIYVPVGKTTRLVMTSQDVIHSF 166 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 ++P +++ A+ G T L E G + + G S M AI D FD+W Sbjct: 167 YVPAFRNKMDAIPGRYTTLTFTPTEKGDFVVYCTEFCGTSHSNM-LSAIRVVDPEIFDKW 225 Query: 235 VAKA 238 A A Sbjct: 226 YAAA 229 >UniRef50_B7KCJ0 Cytochrome c oxidase subunit 2 n=12 Tax=Cyanobacteria RepID=B7KCJ0_CYAP7 Length = 316 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 30/234 (12%) Query: 42 SLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILII 100 S ++T + + V +L ++ F +AS D+ P+ + +E V+WT +PIL++ Sbjct: 62 SFLVTLGSFIFLGVTGTVLYSIFFQ---QASKYDSSDGPHIEGNITLE-VIWTAIPILLV 117 Query: 101 IFLAVLTWKT--THALEPSKPLAHDEKPI------------------TIEVVSMDWKWFF 140 +++A +++ ++ L H PI I+V + W W F Sbjct: 118 VWIATYSYQIYIDMNIQTGMGLGHIHLPIKMESAMAAPMTNGSEEVENIDVQAKQWAWVF 177 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPEQG+++ E+ P++ + + S V++ F+IP + A+ G ++ Sbjct: 178 NYPEQGVSS-TELHLPSDRRIRLTLKSEDVIHGFYIPAFRIKQDAIPGRTIQVEFTPIRQ 236 Query: 201 GTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQWV-AKAKQSPNTMSDMAAFE 252 G Y + +SG F+ M+ + +P+ + +W+ +K P + AA E Sbjct: 237 GKYRLRDSQFSGTYFATMQANVVVQSPED--YQKWLKTSSKLKPTVAENEAASE 288 >UniRef50_B6IRX5 Cytochrome c oxidase subunit 2 n=1 Tax=Rhodospirillum centenum SW RepID=B6IRX5_RHOCS Length = 336 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 33/213 (15%) Query: 73 NKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 N+ +P+ + N V V WTV P++I+I +A+ ++++ + ++ +P D +TI++ Sbjct: 80 NEKRNPTPSRTSHNTVLEVAWTVIPVVILIAIAIPSFQSLYYMD-REPAQVD---MTIKI 135 Query: 132 VSMDWKWFFIYPEQG---------------------IATVNEIAFPANTPVYFKVTSNSV 170 W W F YP+ G + N P + +T+ V Sbjct: 136 TGRQWYWDFEYPDHGGVQFSSFIVTDDDLPEGGLRLLEVDNRAVVPVGANIRLLITAGDV 195 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP--GFSGMKFKAIATPDR 228 ++S +P L + A+ G + + PG Y G + G F M +A+ P+R Sbjct: 196 LHSVAMPSLAIKRDAIPGRLNESWMRIDRPGVYRGQCSEICGTNHAFMPMVIEAV-EPER 254 Query: 229 AAFDQWV--AKAKQSPNTMSDMAAFEKLAAPSE 259 F WV +A+ M+ AF LAAPSE Sbjct: 255 --FAAWVNERRAEAGLEPMTVQVAFAPLAAPSE 285 >UniRef50_Q3JAA7 Cytochrome c oxidase, subunit II n=3 Tax=Bacteria RepID=Q3JAA7_NITOC Length = 352 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 77/191 (40%), Gaps = 19/191 (9%) Query: 99 IIIFLAVLTWKTTHALE--PSKPLAHDEKPITIEVVSMDWKWFFIYPEQG----IATVNE 152 +I + VLT T+ L P+ D + I V W W Y I NE Sbjct: 106 VIFPILVLTIYLTYGLSLMPALLKPADSDDLQIAVSGEQWWWRVRYLSSSGGEVIELANE 165 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 I P V + S V++SF++P L ++ + G +RL L A + G Y G+ A Y G Sbjct: 166 IRLPLGESVNLLLDSPDVIHSFWVPSLTGKMDMIPGRISRLTLKATKVGVYHGVCAEYCG 225 Query: 213 PGFSGMKFKAIA-TPDRAAFDQWVAKAKQSPNTMSDMA---------AFEKLAAPSEYNQ 262 + MK + TPD AF W+A A+ P + A FE +A Sbjct: 226 SAHALMKLDVVVMTPD--AFAAWLA-AQGQPAAVPQQALAARGQELFQFEGCSACHTIRG 282 Query: 263 VEYFSNVKPDL 273 V PDL Sbjct: 283 TAADGQVGPDL 293 >UniRef50_B0R3W3 Cytochrome c oxidase subunit 2 n=2 Tax=Halobacterium salinarum RepID=B0R3W3_HALS3 Length = 255 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 30/211 (14%) Query: 45 LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI-LIIIFL 103 L A + + +++ IL V WK+R +++ AK P + N+ + WTV ++++F+ Sbjct: 45 LVAAAITITLLVEGIL--VYTVWKFRNADE-AK--P--TKENRRLEITWTVATAVVLLFV 97 Query: 104 AVLTWK---TTHALEPSKPLAH---DEKPITIEVVSMDWKWFFIYPEQGIA--------T 149 V + T + L + +E T+ V + W W + Y ++ T Sbjct: 98 GVSAYSAMGTPYLLSSGDDVQAAMANEDSATVTVEGVQWYWNYDYAGSNVSMSSGAGNDT 157 Query: 150 V---NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIAN--EPGTYD 204 V + PA+T V + SN V+++F P LG ++ A+ G Q HL+ N + GTY Sbjct: 158 VVGNQPLVLPADTEVTIQTESNDVIHAFHAPELGLKMDALPGQQN--HLVTNDLDEGTYQ 215 Query: 205 GISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 A + G G S M K I DR +D ++ Sbjct: 216 LYCAEFCGAGHSKMLSK-IHVVDRDTYDAYI 245 >UniRef50_Q6PYD1 Cytochrome c oxidase subunit II (Fragment) n=1 Tax=Pasteuria penetrans RepID=Q6PYD1_PASPE Length = 144 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 11/147 (7%) Query: 22 LSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY 78 ++GC ++L P G +G +Q L+ +F +ML V A++MA+ R ++D Y Sbjct: 2 MAGCGDERISVLQPAGGVGEQQLRLMFLSFFVMLGVF--AVVMALYIYVLIRFRSRDDGY 59 Query: 79 -SPNW--SHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 SP+ H + +VWT+ P+LI++ LAV + + T E ++ + P+ ++V Sbjct: 60 ISPSKLPHHGSTKMELVWTIIPVLILVVLAVPSVRYT--FESARKPVSGKLPLRVDVKGY 117 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPV 161 + W YP+ GI T +I P +TPV Sbjct: 118 RYWWSIEYPDFGIKTAGKIHIPKDTPV 144 >UniRef50_A9B5D1 Cytochrome c oxidase subunit 2 n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5D1_HERA2 Length = 359 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 26/246 (10%) Query: 14 SLFAGTVLLSGCNS----ALLDPKGQI--GLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 +L G+V+L+ C L+P + + S +L G+++ +++ L+ Sbjct: 16 TLLLGSVVLAACGQKTPQTTLNPASESTRAIYNLSELLFWLGVVVFLIVQTWLIVSII-- 73 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLA-VLTWKTTHALEPSKPLAHDEKP 126 KYR KD+ P H N + WT+ II + V T+ T +E P Sbjct: 74 KYR--QKDSSQIPTQIHGNTKVEIAWTIVPAIIAIVIFVFTFDTIRKIE-FMPDEAAGNT 130 Query: 127 ITIEVVSMDWKWFFIYPE------QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 + ++V+ W W F YP+ + + T NE+ P+ + + K+TS V++ F+IP L Sbjct: 131 LNVKVIGHQWWWEFQYPDIKDASGKPLVTANELWIPSGSYIDVKMTSVDVIHDFWIPGLA 190 Query: 181 SQIYAMAGMQTRLHLIANE-----PGTYDGISASYSGPGFSGMKFK-AIATPDRAAFDQW 234 + M ++ L A++ P + G A Y G + MK + +A+P A F +W Sbjct: 191 GKRDVMPNRESGLWFKADDVADGSPAVFWGQCAEYCGGQHAYMKMRVVVASP--ADFQKW 248 Query: 235 VAKAKQ 240 ++ Q Sbjct: 249 SSEQSQ 254 >UniRef50_D2RUF7 Cytochrome c oxidase, subunit II n=2 Tax=Halobacteriaceae RepID=D2RUF7_9EURY Length = 329 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 9/177 (5%) Query: 66 AWKYRASN--KDAKYSPNWSH----SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 A+KYR KD + P + + + I +I ++++ W L P Sbjct: 37 AYKYRDDGEPKDDESLPTLGELPTGGKGGKKLFLSFGISAVIVISLVIWTYGMLLYVEDP 96 Query: 120 LAH-DEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 DE+P+ IEV + W+F Y G+ +++ + PA+ PV + TS V ++F IP Sbjct: 97 QDEFDEEPVEIEVTGQGFAWYFEYA-NGVESISTMRIPADHPVAIEATSGDVWHTFGIPD 155 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 L + A+ G +A+EPG ++ G + M + + AF++W+ Sbjct: 156 LRVKADAIPGEYDETWFMADEPGEHEIKCFELCGESHTAMT-GNVQVMEEEAFNEWL 211 >UniRef50_Q3J6Q8 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosococcus oceani RepID=Q3J6Q8_NITOC Length = 281 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 104/261 (39%), Gaps = 42/261 (16%) Query: 14 SLFA------GTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLML--IVVIPAILMAVGF 65 SLFA G L+SG A L G+ S + +++ I V IL+ Sbjct: 8 SLFATIIGGTGLFLVSGNACAELGLNLTRGVTPTSEEIYDLHMLIFWICVGVGILVYGIM 67 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDE 124 AW K + H N V WTV P+LI+I +AV T+ + A D Sbjct: 68 AWSIYHHRKSKGAVASQFHENLTLEVTWTVIPLLILIAVAVPA--TSAMVRIYDSSASD- 124 Query: 125 KPITIEVVSMDWKWFFIYPEQG-------------------------IATVNEIAFPANT 159 +TI+V W+W + Y + + N + P + Sbjct: 125 --LTIKVTGYQWRWHYEYVDHDFGFTSSLSTPFDQIVNKAPKGEHYLLEVDNPLVLPTDK 182 Query: 160 PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 V F +T++ V ++F++P G + A+ G + EPG Y G A G G M Sbjct: 183 KVRFVITADDVNHAFWVPAFGFKQDAIPGFINEAWAVIQEPGIYRGQCAELCGRGHGYMP 242 Query: 220 FKAIA-TPDRAAFDQWVAKAK 239 A TP+ FD+W+A++K Sbjct: 243 IVVEAKTPEE--FDKWMAESK 261 >UniRef50_C1DG42 Cytochrome c oxidase subunit 2 n=5 Tax=Gammaproteobacteria RepID=C1DG42_AZOVD Length = 385 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 33/228 (14%) Query: 12 WLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA 71 W+ L + + L + ++ + + RS+ + I V +L+ W A Sbjct: 8 WMGLLSCSALSQAQAAWDVNMRPGVTEVSRSVFDLHMTIFWICVAIGVLVFGAMFWSMFA 67 Query: 72 SNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTT-HALEPSKPLAHDEKPITI 129 + + P H N V+WTV P+LI+I +AV +T H +PS+P + I Sbjct: 68 HRRSRRPQPAHFHENTRVEVLWTVIPLLILIAMAVPATRTLLHIYDPSEP------DLDI 121 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIA-------------------------FPANTPVYFK 164 +V WKW + Y + + + +A PA V F Sbjct: 122 QVTGYQWKWHYKYLGEDVEFFSNLATDRNAIGNQAPKNDHYLLEVDEPLVIPAGAKVRFL 181 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 VT+ V++S+++P L + A+ G EPG Y G G Sbjct: 182 VTAADVIHSWWVPELAVKKDAIPGFINETWTRVAEPGLYRGQCTELCG 229 >UniRef50_Q9B8D8 Cytochrome c oxidase subunit 2 n=150 Tax=Eukaryota RepID=COX2_CANAL Length = 262 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 45/204 (22%) Query: 74 KDAKYSPNWSHSNKVEAVVWTV-PILIIIFLA----VLTWKTTHALEPSKPLAHDEKPIT 128 KD +++ + +V ++WT+ P +I++ +A +L + L P+ +T Sbjct: 55 KDNRFAYKYVRHGQVIEIIWTIFPAVILLLIAFPSFILLYLCDEVLTPA---------MT 105 Query: 129 IEVVSMDWKWFFIYPE--------------------------QGIATVNEIAFPANTPVY 162 I+V+ + W W + Y + + + T I P +T + Sbjct: 106 IKVIGLQWYWKYEYSDFVDSIGETIEFESYVIPDDMLEPGALRLLDTDTSIVVPVDTHIR 165 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP--GFSGMKF 220 F VT+N V++SF IP LG +I A G ++ + G Y G + G G +K Sbjct: 166 FVVTANDVIHSFTIPSLGMKIDATPGRLNQVSALIQRTGVYYGQCSELCGVNHGMMPIKL 225 Query: 221 KAIATPDRAAFDQWVAKAKQSPNT 244 + ++ D F +W+ + + S N+ Sbjct: 226 ECVSIED---FIEWLGENEVSLNS 246 >UniRef50_Q0ABY9 Cytochrome c oxidase subunit 2 n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABY9_ALHEH Length = 311 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 110/281 (39%), Gaps = 52/281 (18%) Query: 13 LSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 LS F+ L G SAL P+G L Q L + V I ++ F + Sbjct: 12 LSAFSSAAL--GGFSALNMPRGPTALSQDVYDLHMLVFWICVAIGVVVFGAIF-YSILTH 68 Query: 73 NKDAKYSPN-WSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIE 130 K P+ +SHS ++E VVWT+ P +I+I +AV KT +E + +T++ Sbjct: 69 RKSRGVKPSQFSHSTRLE-VVWTIIPFVILIVMAVPATKTLLDMEDVS-----DYDLTVK 122 Query: 131 VVSMDWKWFFIYPE---QGIA------------------------------TVNEIAFPA 157 V W W + Y + +G A N + P Sbjct: 123 VTGYQWLWHYEYMDGDAEGTAFYSSMDRDTRLARIRANGLSPADVDNYLLEVDNPLVLPV 182 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 V F +TSN V++S+++P G + + G + +EPGTY G A G + Sbjct: 183 GKRVRFLLTSNDVIHSWWVPEFGWKKDTIPGFVNEAWVQVDEPGTYRGQCAELCGRDHAF 242 Query: 218 MKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPS 258 M + + + WV + + A E+LAAP Sbjct: 243 MPI-VVVVKEEEDYLAWV-------DEQVNGAGGEQLAAPG 275 >UniRef50_Q089E4 Cytochrome c oxidase subunit 2 n=102 Tax=cellular organisms RepID=Q089E4_SHEFN Length = 528 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 60/252 (23%) Query: 45 LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFL 103 L FG+M+ +I Y +K A + N+ S KVE + WTV P +I+I + Sbjct: 53 LVVFGIMIYSMI------------YHRKSKGA-VAANFHESTKVE-IAWTVIPFIILIGM 98 Query: 104 AVLTWKTTHALE-PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIA-------- 154 A+ KT A+E PS + +TI++ WKW + Y ++ I + ++ Sbjct: 99 AIPATKTLIAMEDPS------DADLTIKITGSQWKWHYSYFDKDIEFYSTLSTPRAQIDG 152 Query: 155 -----------------FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197 P N V F +TS+ V++S+++P + A G Sbjct: 153 SEAKGEHYLLEVDKPLVLPINQKVRFLMTSDDVIHSWWVPAFAVKKDANPGFINESWTRI 212 Query: 198 NEPGTYDGISASYSGP--GFSGMKFKAIATPDRAAFDQWVAKAKQ--------SPNTMSD 247 ++PG Y G A G GF + +A++ D FD W+ + KQ + +MS Sbjct: 213 DKPGIYRGQCAELCGKDHGFMPIVVQALSEAD---FDNWLVEQKQLASNAAAAAAASMSK 269 Query: 248 MAAFEKLAAPSE 259 + E+L + E Sbjct: 270 TLSLEELTSQGE 281 >UniRef50_A9F8S3 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F8S3_SORC5 Length = 362 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 12/211 (5%) Query: 39 EQRSLILTAF-GLMLIVVIP-----AILMAVG--FAWKYRASNKDAKYSPNWSHSNKVEA 90 EQRS + GL V++ A++ +G F +YR +D P+ + Sbjct: 13 EQRSSLAREIDGLHYFVILATMGGAALITLIGGYFLIRYRRRLQDTP-RPHPGAFARPAL 71 Query: 91 VVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV 150 + TV + + FL + W A D+ + + V W W F YP G + Sbjct: 72 FLETVSLFALGFLFLTFWTIGTRQFADLRTAPDDA-LDVYVTGKQWMWKFGYP-GGDREI 129 Query: 151 NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASY 210 + + PA+ PV +TS V++SF++P + + G T ANEPG Y + + Sbjct: 130 SVLYVPAHRPVRLIMTSRDVIHSFYVPEFRIKQDVIPGRYTTAWFEANEPGAYPILCTEF 189 Query: 211 SGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 G S M+ + IA D +++W+A S Sbjct: 190 CGTSHSEMRGQVIAL-DPVDYERWLAGGLAS 219 >UniRef50_Q72B26 Cytochrome c oxidase subunit 2 n=6 Tax=Desulfovibrionales RepID=Q72B26_DESVH Length = 426 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 15/168 (8%) Query: 48 FGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH--SNKVEAVVWT-VPILIIIFLA 104 FG+ I+++ + F W+Y D + +P + + + WT +P LI++ L Sbjct: 20 FGVSAIMLLGITATMLWFVWRY-----DHRRNPVATEIPGSVLAETAWTLIPTLIVMALF 74 Query: 105 VLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFK 164 W AL A + + V + W W F YP ++V + PA PV Sbjct: 75 YYGWAGYKALRTVPADA-----LEVGVKARMWSWIFEYPNGKRSSV--LYVPAGKPVKLD 127 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 +TS V++S +IP ++ + GMQT + PG +D + A Y G Sbjct: 128 MTSVDVIHSLYIPAFRIKMDTVPGMQTYAWFKTDGPGEFDILCAEYCG 175 >UniRef50_P24011 Cytochrome c oxidase subunit 2 n=13 Tax=Bacillales RepID=COX2_BACSU Length = 356 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 16/242 (6%) Query: 23 SGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 SGC + L P G++ +Q L + + +M++VV ++ ++R S Sbjct: 19 SGCGKPFLSTLKPAGEVADKQYDLTVLSTLIMVVVVAVVSVIFFYVIVRFRRSRVGENTI 78 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKT-THALEPSKPLAHD----EKPITIEVVSM 134 P NK + WTV ++++ + V+ T L + P+ E + + V + Sbjct: 79 PKQVEGNKFLEITWTVIPILLLIILVIPVVLYTLELADTSPMDKKGRKAEDALVVNVRAN 138 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 + W F YP+ GI T E+ P + VYF + ++ V +SF+IP +G ++ + + Sbjct: 139 LYWWEFEYPDYGIITSQELIVPTDQRVYFNLKASDVKHSFWIPSVGGKLDTNTDNENKFF 198 Query: 195 LI-----ANEPGT-YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM-SD 247 L + E G + G A GP + M FK + T F W + K +T SD Sbjct: 199 LTFDSKRSKEAGDMFFGKCAELCGPSHALMDFK-VKTMSAKEFQGWTKEMKNYKSTAESD 257 Query: 248 MA 249 +A Sbjct: 258 LA 259 >UniRef50_B8HMH5 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HMH5_CYAP4 Length = 351 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + + V + + W F YP+ I + E+ P N V +++N V+++F++P+ + A+ Sbjct: 228 LEVNVTGLQYAWIFTYPDSNIVS-GELHLPVNRSVKLNISANDVIHAFWVPQFRLKQDAI 286 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAI 223 G QTR+ G Y I A G S MK + I Sbjct: 287 PGQQTRMRFTPTAVGEYPVICAELCGAYHSAMKTRVI 323 >UniRef50_B4DA33 Cytochrome c oxidase subunit 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA33_9BACT Length = 317 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 17/212 (8%) Query: 44 ILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFL 103 +L G++ I V A+++ F +YR + + + + W+ I ++IF+ Sbjct: 28 LLVLCGIIAIGVCAAVIV---FCLRYRQGSNATRQA---EQKTIPLEITWSA-IPLVIFI 80 Query: 104 AVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYF 163 A+ W SKP + I VV W W +P G +NEI N PV Sbjct: 81 ALFIWAGAVYFHMSKP---PDNATEIHVVGKQWMWKIQHP-TGRREINEIHLLINQPVKL 136 Query: 164 KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM-KFKA 222 +TS V++ F+P ++ + G T + G Y A Y G G S M + Sbjct: 137 LMTSQDVIHDVFVPAFRTKQDVLPGRYTIEWFTPIKTGDYHLFCAEYCGDGHSRMGGWVH 196 Query: 223 IATPDRAAFDQWVAKAKQSPNTMSDMAAFEKL 254 + PD A+ +W+A + T S +AA +L Sbjct: 197 VMAPD--AYAKWLA---DTSTTESVVAAGARL 223 >UniRef50_A3Z005 Cytochrome c oxidase subunit 2 n=1 Tax=Synechococcus sp. WH 5701 RepID=A3Z005_9SYNE Length = 309 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 20/175 (11%) Query: 84 HSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT-------------I 129 N ++WTV P+++++ +A T + + P+ H P T + Sbjct: 92 EGNTTLEIIWTVIPLVLVMGIAAYTIQVNREIGLIGPMDHAHAPATANSTAAAPPPGGEV 151 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP--RLGSQIYAMA 187 +V++ W W F YP G+++ E+ P + ++ S V++ F++P RL Q+ + Sbjct: 152 QVIARQWSWEFRYPVAGVSS-TELHLPLGRRLGLQLESEDVIHGFYVPAFRLKQQV--IP 208 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 G L L G Y + YSG F+ + + + A+ +W+ +A + P Sbjct: 209 GRSITLFLTPTRAGRYRLRDSEYSGTWFAANQADVVVESEE-AYQEWLRRASRLP 262 >UniRef50_Q5V019 Cytochrome c oxidase subunit 2 n=2 Tax=Halobacteriaceae RepID=Q5V019_HALMA Length = 271 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 4/161 (2%) Query: 91 VVWTVPILIIIFLAVLTWKTTHALEPSK-PLAHDEKPITIEVVSMDWKWFFIYPEQGIAT 149 V ++ I II ++++ W + L + P E+ + I+V + W FIYP T Sbjct: 88 VFYSFSISAIIVVSLIAWTYSQLLYIEQGPDPAQEEALEIDVEGYRFGWDFIYPNG--HT 145 Query: 150 VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 N + P + V +VTS V ++F IP L + A+ G T ANE GTY Sbjct: 146 ANTLRVPQDRVVRLQVTSTDVFHNFGIPELRVKTDAVPGQYTSAWFTANETGTYAAKCYE 205 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 G G S M + P + ++ W + S + AA Sbjct: 206 LCGSGHSLMTTDVVVMP-QDEYEAWYNGTEGSAGSGDQPAA 245 >UniRef50_A9VZ92 Cytochrome c oxidase, subunit II n=9 Tax=Alphaproteobacteria RepID=A9VZ92_METEP Length = 362 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 11/202 (5%) Query: 40 QRSLILTAFGLMLIVVIPAILMAVG----FAWKYRASNKDAKYSPNWSHSNKVEAVVWTV 95 Q + + T F +L++ +L+ VG FA ++R + AK S ++ + WT Sbjct: 18 QAAKVDTIFVGLLLISSAIVLLVVGLILTFAIRFRRGSP-AKRGEMPSVVSREFEIGWTA 76 Query: 96 PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAF 155 L I F+ + W + + P + I I VV W W P G +NE+ Sbjct: 77 ATLFI-FVFIFWWAASVEIVAFSP---PKDAIEIHVVGKQWMWKTQGPS-GTREINELHV 131 Query: 156 PANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGF 215 P PV +TS V++SF++P + A+ QT A + GTY + Y G Sbjct: 132 PVGAPVRLLLTSQDVIHSFYVPAFRLKRDALPYQQTETWFQATKTGTYHLLCTEYCGTDH 191 Query: 216 SGMKFKAIATPDRAAFDQWVAK 237 S M + I + + QW+ + Sbjct: 192 SRMLGRVIVM-EPQDYAQWLTR 212 >UniRef50_D2QS53 Cytochrome c oxidase subunit II n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QS53_9SPHI Length = 373 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 51/218 (23%) Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHD 123 FAW Y+ +K+ + + ++K+E ++WT VP +I+ + W+ + P Sbjct: 109 FAWMYQ--HKEGYKAAYYPENHKLE-LIWTIVPAVIMAVMVFTGWRAWRDIMAEAP---- 161 Query: 124 EKPITIEVVSMDWKWFFIYP-------------------EQGIATVNEIAF--------- 155 E+V + W YP E GI +E +F Sbjct: 162 ANAQVFEIVGKQFNWIARYPGVDNNKLGSFNYKLIDNNNETGIDYTDEASFDDFVSTSEL 221 Query: 156 --PANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA------------NEPG 201 PAN PV K+ + V++S FIP L ++ A+ GM TR IA N Sbjct: 222 HIPANKPVLLKIRARDVLHSVFIPHLRVKMDAVPGMPTRFWFIADKTTDEMRNITGNPDF 281 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 TY+ G G M+ + + D AA++ W + K Sbjct: 282 TYEIACTEVCGQGHFSMRIR-LVVEDEAAWEAWCKQQK 318 >UniRef50_C7NIK2 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococcineae RepID=C7NIK2_KYTSD Length = 304 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 31/240 (12%) Query: 18 GTVLLSGCNSALLDPKGQI--GLEQRSLILTAF--GLMLIVVIPAILMAVGFAW---KYR 70 G ++LS C S+ +G + G+ + S +T F G+ + + +L+ AW YR Sbjct: 24 GALVLSACGSSDQIARGYLPEGVTENSDGVTTFWVGMWIAALAVGVLVWGLTAWCIVAYR 83 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI- 129 + D++ ++ +E + VPI+++ L V K + L + +E+P I Sbjct: 84 RKD-DSELPKQVRYNMPIEILYTVVPIVMVAGLFVQNVKLENDL-----MDLNEEPENIV 137 Query: 130 EVVSMDWKWFFIY---------------PEQGIAT-VNEIAFPANTPVYFKVTSNSVMNS 173 V W W F Y E+G+A + + P N F +T+ V++S Sbjct: 138 HVAGKQWSWDFNYLSDDVHESGQQAVLTGEEGVAEGLPTLYLPVNERTEFVLTARDVIHS 197 Query: 174 FFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 F++P+ ++ + G+ R + E GTY G A G S M F+ + +R +D+ Sbjct: 198 FWVPQFLQKLDMIPGVVNRFQVTPTEVGTYQGKCAELCGAYHSEMLFQ-VKVVERDEYDK 256 >UniRef50_C1F1C9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F1C9_ACIC5 Length = 347 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 15/210 (7%) Query: 37 GLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVP 96 GL +L +T G + +VV A+ AV +YR D P + + WTV Sbjct: 50 GLAIFALAIT--GGIFVVVAAAMFYAV---IRYRRRKDDDGSEPPQIFGSVQIEIAWTVI 104 Query: 97 ILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFP 156 +II+ + LT + + K + + I VV + W YP GI T NEI P Sbjct: 105 PIIIVVVLFLT--SARLIFAIKDAPRPKSALNITVVGHQFWWEIRYPGLGIITANEIHVP 162 Query: 157 ANT-----PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYS 211 +T P Y K+ S V++SF++P+L + A+ + G Y G + + Sbjct: 163 VSTKADPQPTYIKLLSADVVHSFWVPQLAGKTDAIPNHVNETWIEPTHTGIYKGQCSQFC 222 Query: 212 GPGFSGMKFKA-IATPDRAAFDQWVAKAKQ 240 G + M + + TP A F+ WV + +Q Sbjct: 223 GAEHAKMLLRVYVDTP--AQFEAWVKQQQQ 250 >UniRef50_Q0AMG7 Cytochrome c oxidase subunit 2 n=2 Tax=Hyphomonadaceae RepID=Q0AMG7_MARMM Length = 292 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 44/280 (15%) Query: 9 SLGWLSLFAGTVLLSG--CNSAL-LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 +L W + AG G + AL P +E+ + L +I VI ++M + Sbjct: 16 ALTWTTFAAGAFATPGQPTDGALGFQPAVTPIMERITWFHDILLLPMITVITLVVMGLLV 75 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAH-- 122 +R N+ A +P+ + N + VVWT VP+L++I +A+ PS PL + Sbjct: 76 FVMFR-FNRKANPTPSKNSHNTLLEVVWTAVPVLLLIVIAI----------PSFPLLYMQ 124 Query: 123 DEKP----ITIEVVSMDWKWFFIYPEQGIAT-----VNE----------------IAFPA 157 DE P T++ W W + YP+ +A + E + P Sbjct: 125 DELPPEIDFTLKATGNQWNWSYEYPDHEVAEYFSNMIEEEDLQPGQLRNLSVDYPLVVPV 184 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 + V VT+ V++++ +P G+++ A+ G A + G Y G + G + Sbjct: 185 DATVRVLVTATDVIHNWAMPAFGTKMDAIPGRINEAWFQATQEGVYYGQCSELCGLRHAF 244 Query: 218 MKFKAIATPDRAAFDQWV-AKAKQSPNTMSDMAAFEKLAA 256 M + P + FD W+ AKA+ + +D E AA Sbjct: 245 MPIEVHVVP-QDVFDAWIAAKAEDEYSEAADAIIAEYTAA 283 >UniRef50_A3ZTG0 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTG0_9PLAN Length = 252 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 16/190 (8%) Query: 67 WKYR-ASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDE 124 W+Y A+N D +SH + V+W++ P ++++F+A+ +P D Sbjct: 57 WRYDGATNADPVV---FSHGSHALEVIWSILPAVVLLFIAIYQMDAWAGARMRRPTMADG 113 Query: 125 --KPITIEVVSMDWKWFFIYP-EQG-------IATVNEIAFPANTPVYFKVTSNSVMNSF 174 KP V ++W YP E G + +N++ P + + ++ S V++SF Sbjct: 114 AIKPPLCRVTGRQFEWRIQYPGEDGRLDTPDDLHVLNDLHVPVDEEIVIEIESMDVLHSF 173 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 F+P + + + GM+ + + G D + A G G M+ + I + A FD+W Sbjct: 174 FLPNMRVKQDVVPGMRQYVWFHPVKEGVSDIVCAELCGWGHYKMRGR-ITVDNAAEFDRW 232 Query: 235 VAKAKQSPNT 244 + A T Sbjct: 233 YSAAYAEQET 242 >UniRef50_Q1RI44 Probable cytochrome c oxidase subunit 2 n=19 Tax=cellular organisms RepID=COX2_RICBR Length = 269 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 26/154 (16%) Query: 124 EKPITIEVVSMDWKWFFIYPEQG---------------------IATVNEIAFPANTPVY 162 E +TI+VV W W +IYP+ + N I P N V Sbjct: 120 EADLTIKVVGYQWYWHYIYPDHNDIEFDSVMISDENLKPDQKRLLDVDNRIVIPENATVR 179 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKA 222 F +T++ V++SF +P LG +I A+ G + G Y G + G M A Sbjct: 180 FLITASDVIHSFAVPSLGFKIDAVPGRVNETWTRVAKKGVYYGQCSELCGINHGFMPI-A 238 Query: 223 IATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 I + FD WVA S N ++ KLAA Sbjct: 239 IEVVSKEDFDNWVA----SKNKVAANGENSKLAA 268 >UniRef50_Q1V0P2 Cytochrome c oxidase subunit 2 n=2 Tax=Candidatus Pelagibacter ubique RepID=Q1V0P2_PELUB Length = 271 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 31/213 (14%) Query: 51 MLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS---HSNKVEAVVWT-VPILIIIFLAVL 106 +L+ VI AI + V F Y A +PN S H+ VE V+WT +P LI+I +AV Sbjct: 47 ILLPVIIAISVFVLFLMIYVCIRFRASKNPNPSKTTHNVAVE-VLWTLIPCLILIVMAVP 105 Query: 107 TWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA------------------ 148 ++K + + + P A +TI+ V W W + YP++ I Sbjct: 106 SFKILYK-QDTIPKAD----LTIKAVGYQWYWGYEYPDENIIFESYMIKEAELKENQPRL 160 Query: 149 -TV-NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 TV NE+ P N V +T+N V++++ +P G + A+ G A + GTY G Sbjct: 161 LTVDNEVIVPVNKVVKVLITANDVLHAWALPSFGVKRDAVPGRINETWFKAEKVGTYYGQ 220 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 + G + M D + W+A+AK Sbjct: 221 CSELCGIEHAFMPITVKVVTDE-EYAIWLAEAK 252 >UniRef50_B3CN60 Cytochrome c oxidase subunit 2 n=7 Tax=Wolbachia RepID=B3CN60_WOLPP Length = 254 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 31/194 (15%) Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 +R K +H+ VE + + +P +I+ VL +K ++ + + + IT Sbjct: 66 FRFRKGKVKNVSKITHNIFVEIIWFVIPTIIV---GVLAFKNAELIKLQEKVPKAD--IT 120 Query: 129 IEVVSMDWKWFFIYPE-QGIA--------------------TVNEIAFPANTPVYFKVTS 167 ++V+ W W + YPE QGI+ N + P NT + +VT+ Sbjct: 121 LKVIGHQWYWSYKYPEYQGISFDSYIKGKEDLTERDLKLFSVDNNVILPINTNIRLQVTA 180 Query: 168 NSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP--GFSGMKFKAIAT 225 V++S+ IP G +I A+ G +PG Y G G GF + +A++ Sbjct: 181 GDVIHSWGIPAFGIKIDAIPGRLNEAWFNVTKPGIYYGQCYELCGQGHGFMPIVVEAVSK 240 Query: 226 PDRAAFDQWVAKAK 239 D F++W+ K Sbjct: 241 ED---FNKWIEDKK 251 >UniRef50_C5CLF6 Cytochrome c oxidase, subunit II n=5 Tax=Burkholderiales RepID=C5CLF6_VARPS Length = 322 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 5/119 (4%) Query: 127 ITIEVVSMDWKWFFIYPEQGIA----TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 + +EV + W W Y E +A T NEI P PV + ++ V++SF++P L + Sbjct: 107 LQLEVTAHQWWWEVRYVEPQVADSFMTANEIHVPTGRPVIVTLKADDVIHSFWVPSLAGK 166 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 + G L+ A+ G Y G A + G + M F +A P + W A +++ Sbjct: 167 KDLIPGRTATLNFRADRDGIYRGQCAEFCGSQHALMAFFVLAEPPE-RYAAWAAAQRRT 224 >UniRef50_Q02BQ9 Cytochrome c oxidase subunit 2 n=3 Tax=Bacteria RepID=Q02BQ9_SOLUE Length = 332 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 7/154 (4%) Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 FA +YR +++ P+ +H+ +VW+V I + + + TW + KP Sbjct: 43 FAIRYRRRSENEL--PHVAHTGYTLEIVWSV-IPFGLTMVMFTWGASIFFNSRKP---PN 96 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 I I V W W + E G +NE+ P PV + S V++SFFIP ++ Sbjct: 97 DAIQIYAVGKQWMWKLEHME-GQREINELHIPVGRPVRITMASEDVIHSFFIPAFRTKQD 155 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM 218 + G T A + G Y A Y G SGM Sbjct: 156 VVPGTYTTTWFTATKTGKYHLFCAEYCGTRHSGM 189 >UniRef50_B1Y7T1 Cytochrome c oxidase subunit 2 n=3 Tax=Proteobacteria RepID=B1Y7T1_LEPCP Length = 269 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 45/226 (19%) Query: 43 LILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAK--YSPNWSHSNKVEAVVWTVPILII 100 LI AF VVI A+++ W++RA A+ Y+P+ +++E W + I + Sbjct: 44 LITGAF----FVVIHAVVIYAILRWRHRAGRGQARAAYTPD---DHRLER--WLIGITTV 94 Query: 101 IFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP-EQGIATV--------- 150 +A+L + +P A K +EVV W+W + + E G+ Sbjct: 95 GIVALLAPGLVVYADYVRPPADALK---VEVVGQQWRWRYRFAGEDGLLGRSDIRHVSAD 151 Query: 151 --------------------NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 NE+ P PV ++ SN V++ FF+P +++ + G Sbjct: 152 NPFGLDPADARGHGDVLIDDNELHLPLARPVQLQLRSNDVLHDFFVPPFRARMNIVPGSV 211 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 T + G ++ + A G G M+ + D AAF W+A Sbjct: 212 TTFWFTPTQTGRFELMCAQLCGIGHHLMR-GVVVVEDEAAFQAWLA 256 >UniRef50_B5INR0 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INR0_9CHRO Length = 292 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + ++V +M + + F YPE I T E+ P PV ++ + V+++F++P+ + + Sbjct: 177 LPVDVTAMQFAFIFHYPEGDI-TSGELHVPLGQPVELRMQARDVIHAFWVPQFRLKQDVI 235 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 G TRL A GTY + A G GM+ + + AF+ W + + +P T + Sbjct: 236 PGQTTRLSFTATRAGTYPIVCAELCGAYHGGMRSNVVVH-EPEAFEAW--RLQNAPATTT 292 >UniRef50_Q3M753 Cytochrome c oxidase subunit 2 n=6 Tax=Nostocaceae RepID=Q3M753_ANAVT Length = 311 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 4/145 (2%) Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 TIEV W W F YP T E+ P N + + V++SF++P Q Y + Sbjct: 151 TIEVFVQQWDWSFRYPNN--VTSQELHLPVNLRTRLNMHAKDVLHSFYVPEFRLQQYIVP 208 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD 247 G L + G Y + +SG F+ M + ++QW+ +AK ++ + Sbjct: 209 GRNIDLVVTPIRMGKYKLKDSLFSGTYFALMD-ANVHVESLEQYNQWLTQAKHESMSIKN 267 Query: 248 MAAFEKLAAPSEYNQVEYFSNVKPD 272 A E P + +++ V PD Sbjct: 268 QAVAEYSQPPKTLFKSGWYT-VAPD 291 >UniRef50_A9BE64 Cytochrome c oxidase subunit 2 n=25 Tax=cellular organisms RepID=A9BE64_PROM4 Length = 291 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 2/117 (1%) Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 I +EV +M + + F YP+ I + E+ P PV K+ S V+++F++P + + Sbjct: 174 IPVEVTAMQFAFLFHYPDGDIIS-GELHVPIGQPVTMKMESKDVIHAFWVPEFRLKQDVI 232 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPN 243 G T L+ G Y I A GP GM+ + + + W AK + P+ Sbjct: 233 PGQPTILNFTPTRVGKYPIICAELCGPYHGGMR-STVVVEELEDYQNWFAKNAKKPD 288 >UniRef50_B5EQY9 Cytochrome c oxidase subunit II n=4 Tax=Acidithiobacillus ferrooxidans RepID=B5EQY9_ACIF5 Length = 254 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%) Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 A+++RAS+ +P + VV + + I I LA + LE + D K Sbjct: 74 AFRFRASSMSDTAAPAYQKRTWAPFVVTWLVLAIGINLANTIYPGMVGLEQLWGIQLDTK 133 Query: 126 -PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 P+ I+V + WKW F YP+QG+ V+++ P + F + + VM+ F++P G + Sbjct: 134 NPLVIDVTAQQWKWTFSYPKQGVTDVSQLVVPEGRTIDFVLRTKDVMHDFWVPAWGEK 191 >UniRef50_D2PZ51 Cytochrome c oxidase, subunit II n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZ51_9ACTO Length = 299 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 34/231 (14%) Query: 14 SLFAGTVLLSGCNSALLDPKGQIGLEQ---------RSLILTAFGLMLIV---VIPAILM 61 ++ T++L+GC++ ++GL + RSL + A+ LI+ V IL Sbjct: 34 AVVVSTLVLTGCSAETNAQWKRLGLPEGASDRTEAVRSLWIGAWIAALIIGVMVWGLILF 93 Query: 62 AVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA 121 AV +YR ++DA P + N V++T+ +I VL + T +K A Sbjct: 94 AV---VRYRRRSEDA---PRQTRYNLPLEVLYTLAPFAVI--GVLFFYTVE--NGNKVTA 143 Query: 122 HDEKPI-TIEVVSMDWKWFFIYPE-----QGIATVN------EIAFPANTPVYFKVTSNS 169 + P TI VV W+W F Y E +G+ E+ P N V F++TS Sbjct: 144 MSDSPAHTINVVGQQWQWTFNYKETVDGQEGVWETGTLEEPAELVLPVNESVKFELTSPD 203 Query: 170 VMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF 220 V++SF++P ++ + G L + GT+ G A G S M F Sbjct: 204 VIHSFWVPAFYFKLDVIPGRPNNFELTPTKTGTFAGKCAELCGLYHSRMVF 254 >UniRef50_B8ES67 Cytochrome c oxidase, subunit II n=1 Tax=Methylocella silvestris BL2 RepID=B8ES67_METSB Length = 318 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 15/164 (9%) Query: 124 EKPITIEVVSMDWKWFFIY-----PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 E +++EV W W Y P T NEI P V + V +SF++P Sbjct: 98 EAALSLEVTGRQWWWEVRYLDRAHPSNIFTTANEIHIPIGKFVRVDLRGGDVSHSFWVPA 157 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW---- 234 LG + + G L A++ G+Y G + Y G + M F IA + A F+ W Sbjct: 158 LGGKTDMIPGQVNTTWLQADKVGSYRGQCSEYCGKQHAHMAFTVIAESE-AQFEAWRTAQ 216 Query: 235 ---VAKAKQSPNTMSD-MAAFE-KLAAPSEYNQVEYFSNVKPDL 273 VA A P+ ++ A F+ + A V PDL Sbjct: 217 LRSVAPADPEPSASAEGRATFQTRCGACHTVRGTSAGGRVGPDL 260 >UniRef50_UPI00003C85B5 cytochrome c oxidase polypeptide II n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI00003C85B5 Length = 276 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 3/113 (2%) Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + I VV W+W FIYP G ++ + + PA+TP+ F VTS VM+SF++ + +++ A Sbjct: 132 MDINVVGYQWQWVFIYP-NGASSRHFLVLPADTPIQFNVTSVDVMHSFYLINV-TKVDAF 189 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G + G Y G G + M+ +A P +A ++ W+ + Sbjct: 190 PGHYNYVWSNITLTGEYQFECVELCGLGHAHMRGQAFVLP-KAQYESWLKTTR 241 >UniRef50_Q1YUZ5 Cytochrome c oxidase subunit 2 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUZ5_9GAMM Length = 381 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 37/274 (13%) Query: 16 FAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 AG+ S L P+G + Q + + + + VI + F Y Sbjct: 21 IAGSAFAESSASQLNMPQGVTEVSQAAYDIHMIMIWVCTVIGVGVFGFMFYVMYAHRKSR 80 Query: 76 AKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 + N+ VE ++WT VP +I+I V+ + T AL K D I I++ Sbjct: 81 GAVAENFHEHLGVE-LLWTIVPTIILI---VMAFPATTAL--LKVYDTDNPDIEIKITGY 134 Query: 135 DWKWFFIYPEQGIATVNEI-------------------------AFPANTPVYFKVTSNS 169 WKW + Y +G+ ++E+ P + F VT N Sbjct: 135 QWKWQYEYLGEGVKFMSELRTSDDEVYGREPKGEHYLREVTEALVLPVGKKIRFLVTGND 194 Query: 170 VMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRA 229 V++S+++P G + A+ G+ T ++PGTY G G G + M + A Sbjct: 195 VIHSWWVPDFGVKRDAVPGLFTAGWAKTDKPGTYVGECTELCGQGHAFMPVVVEVK-EEA 253 Query: 230 AFDQWVAKAK----QSPNTMSDMAAFEKLAAPSE 259 +++W+A K + +T+ A E+L A E Sbjct: 254 EYNEWLANKKAEAVEYASTIGKEWAPEELMAKGE 287 >UniRef50_Q3JBQ1 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosococcus oceani RepID=Q3JBQ1_NITOC Length = 211 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 6/196 (3%) Query: 42 SLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIII 101 +L L F L +V I + + FA KYR K +++ S +E VWT+ I + Sbjct: 21 TLFLALFILCSLVTIIITFLIIFFAVKYRRGAKVNRFTVR--KSTAIE-FVWTL-IPFGL 76 Query: 102 FLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPV 161 FLA+ W E P + + I VV W W +P G +N++ P + Sbjct: 77 FLAIFVWAAYFYTELLFPPDDEMVDLDIAVVGKQWMWKLQHP-NGKREINKLHVPLGKNI 135 Query: 162 YFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFK 221 + S V++SFFIP + + G + + + G Y A Y G S M+ K Sbjct: 136 RLTMVSQDVIHSFFIPAFRIKHDVLPGRYSTIWFRPIKLGEYHLFCAEYCGTDHSRMRGK 195 Query: 222 AIATPDRAAFDQWVAK 237 + + + + QW+ + Sbjct: 196 VVVM-EPSDYAQWLQQ 210 >UniRef50_D0LN58 Cytochrome c oxidase, subunit II n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LN58_HALO1 Length = 389 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 1/100 (1%) Query: 124 EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQI 183 E + + V W W F YP+ G A+ + PA PV ++S V++SF++P + Sbjct: 125 EDAMRVYVTGKKWMWSFAYPD-GQASNAVLYVPAGQPVELLLSSRDVIHSFYVPAFRLKH 183 Query: 184 YAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAI 223 A+ G + A +PG Y + A Y G G + M+ + + Sbjct: 184 DAVPGRMNSMWFEAEKPGVYPILCAEYCGDGHATMRGQVV 223 >UniRef50_Q31JY7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechococcus elongatus RepID=Q31JY7_SYNE7 Length = 315 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 4/110 (3%) Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 +T+ V + + W F YP + E+ P V ++ + V+++F++P+ + A+ Sbjct: 169 VTVNVKGLQFAWIFNYPSHNL-IAGELHLPLGKSVQLEIEAQDVIHAFWVPQFRLKQDAI 227 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQWV 235 G +TRL + GTY + A G M+ + I TP+ +D+W+ Sbjct: 228 PGERTRLQFTPTQLGTYPIVCAELCGSYHGAMRSQVIVETPED--YDRWI 275 >UniRef50_B8IHG8 Cytochrome c oxidase, subunit II n=2 Tax=Rhizobiales RepID=B8IHG8_METNO Length = 313 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 9/190 (4%) Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH 122 +GF+ +YR + + S + E + WT L + F+ + W T+ ++ P Sbjct: 39 IGFSVRYRRGSAAPRGPMPEVMSREFE-IGWTSATLFL-FVFLFWWATSVEIKAFLP--- 93 Query: 123 DEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 + I ++VV+ W W ++ G +NE+ P PV + S V++SFF+P + Sbjct: 94 PKDAIEVQVVAKQWMWKTLH-SNGAREINELHVPIGVPVRLALRSQDVIHSFFVPAFRLK 152 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFK-AIATPDRAAFDQWVAKAKQS 241 + G A + G + + A Y G S M+ K + TP+ A W+A + Sbjct: 153 QDVVPGQLHETWFQATKLGVFHLLCAEYCGTDHSRMRGKIVVMTPEDYA--AWLAAQPEG 210 Query: 242 PNTMSDMAAF 251 + + AA Sbjct: 211 DDLAKEGAAL 220 >UniRef50_B4WI06 Cytochrome c oxidase subunit 2 n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WI06_9SYNE Length = 341 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 2/105 (1%) Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 P+ + ++I V + + + F YP+ GI E+ P + PV K+ + V+++F++P Sbjct: 177 PVEMADSALSINVQGLQYAFIFNYPD-GIVD-GELHIPVDEPVELKLNAQDVLHAFWLPE 234 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAI 223 + + G +TRL + A GTY + A GP GM+ + I Sbjct: 235 FRVKQDMIPGQETRLVINAIREGTYPVVCAELCGPYHGGMRTQLI 279 >UniRef50_B9KJJ8 Cytochrome c, monoheme n=5 Tax=Alphaproteobacteria RepID=B9KJJ8_RHOSK Length = 324 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 12/172 (6%) Query: 77 KYSPNWSHSNKVEAVVWTVPILI--IIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 + P EAV+ I++ ++ ++L+W + + P + + + + Sbjct: 64 RRRPGRMSRKLAEAVIIGGGIVLPLVVLTSLLSWGLSIMPDQRAP----GEGLRVRITGE 119 Query: 135 DWKWFFIY----PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 ++ W Y E+ + + NE+ PA ++ + V++SF++P LG + + G Sbjct: 120 EFWWRVDYYPPGSEEPVVSANELRLPAGRRTEIELLAGRVIHSFWVPGLGGKTDMIPGRT 179 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 TR+ L PG Y G A + G + M AI + A F +W+ +A+ P Sbjct: 180 TRMSLEPVTPGIYRGQCAEFCGASHALMAMNAIVL-EEAEFARWL-EAEAGP 229 >UniRef50_Q9YDX7 Heme-copper oxidase subunit 2 n=1 Tax=Aeropyrum pernix RepID=AOX2_AERPE Length = 234 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 11/154 (7%) Query: 98 LIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--IATVNEIAF 155 +I++ L V T T LE S P+ E + + V+ + W F Y G + T+N + Sbjct: 78 IIVMGLIVATIDETLYLEKSPPV---EDALVVMVIGFQFGWQFEYSVGGETVTTLNYLVV 134 Query: 156 PANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL-IANEPG-TYDGISASYSGP 213 P++T + F+VTS V ++F IP ++I A+ G+ + + +EPG Y+ G Sbjct: 135 PSDTLIEFRVTSRDVFHAFGIPEFKNKIDAIPGILNSMWIKTPDEPGKVYNAYCYELCGI 194 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD 247 G S M K I ++ + P+ S+ Sbjct: 195 GHSLMVGKVIVVDKEEFYNAY----NSGPDVFSE 224 >UniRef50_UPI0000510271 cytochrome C oxidase subunit II n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510271 Length = 290 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 38/285 (13%) Query: 4 RKYNKSLGWLSLFAGTVLLSGCNSALLD----PKGQIGLEQRSLILTAF--GLMLIVVIP 57 R + K LG L A LLSGC + P G + T+ G + ++I Sbjct: 11 RSWAKRLGTLGAVAVLALLSGCTKEQVSTGFFPAESKGATNHTEAYTSLWNGAWIALLIV 70 Query: 58 AILMAVGFAWK---YRASNKDAKYSPNWSHSNKVEAVVWTVPILIII---FLAV-LTWKT 110 +++ W YR D +S +E + P+++++ F +V + KT Sbjct: 71 GLIVWGLILWSMVAYRRRKNDRGLPVQLRYSMPIEILFTVTPVILVLGFFFQSVQVMEKT 130 Query: 111 THALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI----------------ATVNEIA 154 T P + + IEV + W W F Y Q + + Sbjct: 131 TDDTTPGEQV--------IEVAAKQWAWDFNYVNQDVYFAGTQVPLDGSEKPGEEAPTLY 182 Query: 155 FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPG 214 P +T + K+ S V++SF++P + + G LHL A + G Y G A G Sbjct: 183 LPVDTDLEIKLRSRDVIHSFWVPAFLEKRDMIPGHDQSLHLRAEKEGEYVGKCAELCGEY 242 Query: 215 FSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 S M F + +A F+ + N +++ P E Sbjct: 243 HSEMLFN-VKVVSKAEFEDYTKSLADEGNKGQLGPEYDRNWYPKE 286 >UniRef50_A4A0M8 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0M8_9PLAN Length = 325 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 30/215 (13%) Query: 45 LTAFGLMLIVVIPAILMAVGFAWKY-RASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIF 102 ++AF +LIV + V F KY R + SP +H+N +E + W+V P +++ Sbjct: 32 ISAFFFVLIVGV-----MVYFVLKYYRRPGHGPQPSP--THNNTLE-IAWSVLPSFLLVV 83 Query: 103 LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVY 162 V+ + ++ A++ I V + W W F+YP A +++ P PV Sbjct: 84 FFVMGFTNYMSMRTPPDDAYE-----IHVQAKKWSWLFVYPNG--AESSDLHIPVGRPVR 136 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA-NEPGT---------YDGISASYSG 212 F + S V+++ F+P +++ + G + + A N GT +D A Y G Sbjct: 137 FILESEDVLHNMFVPAFRTKMDCVPGRYNEIWVQAVNTTGTGVNPDDHKPHDLFCAEYCG 196 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQ--SPNTM 245 S M + + FD W+ KA NTM Sbjct: 197 RDHSNMH-AFVYVYETGDFDAWLEKASNLYEGNTM 230 >UniRef50_Q0VNA0 Cytochrome c oxidase subunit 2 n=2 Tax=Alcanivorax RepID=Q0VNA0_ALCBS Length = 402 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 69/276 (25%) Query: 44 ILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIF 102 I+T GLM+ +I ++ ++R S +P+ H N V+WTV P +I+I Sbjct: 56 IVTVIGLMVCGLILFSMI------RHRRSKNP---NPSTFHENVFFEVLWTVIPFVILIA 106 Query: 103 LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY-------------------- 142 +AV + L+ + E +T++V WKW + Y Sbjct: 107 MAVPATRVLVQLDDTA-----ESELTVKVTGYRWKWSYEYLTYEDDNDIGVSFFSNLATP 161 Query: 143 PEQ-------------------------------GIATVNEIAFPANTPVYFKVTSNSVM 171 PEQ + N++ P+ V F VTS+ V+ Sbjct: 162 PEQYNNPVLSGGLFPYGTAKELVGKEAPEKDHNYNLEVDNKLLIPSGQKVRFLVTSDDVI 221 Query: 172 NSFFIPRLGSQIYAMAGM--QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRA 229 +SF++P G + A+ G +T + + GTY G A G + M A+ + Sbjct: 222 HSFWVPDFGGKKDAIPGFVNETWALVPEGKEGTYYGQCAELCGKNHAFMPI-AVEVVTQD 280 Query: 230 AFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEY 265 F W+A+ K+ + D+ F + E + Y Sbjct: 281 EFKAWIAEEKEKAASGPDLTPFADIDQAMEEGKQVY 316 >UniRef50_D2UBE6 Putative cytochrome c oxidase, subunit II protein n=1 Tax=Xanthomonas albilineans RepID=D2UBE6_XANAL Length = 330 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 42/190 (22%) Query: 83 SHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI 141 +H+ K E +VWTV P+LI+I +A W T L E +T+++ W W + Sbjct: 93 THNTKAE-IVWTVIPVLILIVMA---WPATAKLIAMYDTRDAE--MTVKITGYQWMWRYE 146 Query: 142 Y------------------------------PEQGIATVNEIAFPANTPVYFKVTSNSVM 171 Y P + N + P NT V F +T++ V+ Sbjct: 147 YLGENVSFTSRLARSSDRMRQSGAVPTVEHDPHYLLDVDNRLVLPVNTKVRFLITADDVI 206 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP--GFSGMKFKAIATPDRA 229 +++++P LG + A+ G+ + PG Y G A G GF + +A+ D Sbjct: 207 HAWWVPALGWKQDAIPGIVNEAWTSIDTPGVYRGQCAVLCGKDHGFMPIVVEAMNKQD-- 264 Query: 230 AFDQWVAKAK 239 F +W+A K Sbjct: 265 -FRKWLASRK 273 >UniRef50_B2ZFN0 CoxB n=1 Tax=Thiobacillus prosperus RepID=B2ZFN0_9GAMM Length = 251 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 8/145 (5%) Query: 99 IIIFLAVLTWKTTHALEPSKPLAHDEK-PITIEVVSMDWKWFFIYPEQGIATVNEIAFPA 157 I+I V + LE +A D K P+ ++V W+W F YP+QGI + P Sbjct: 104 IMINTVVFVYPGMVGLEQLWNIAADAKDPLVVDVTGQQWQWSFSYPKQGIMNSPVLEVPV 163 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG-----MQTRLHLIANEPGTYDGISASY-S 211 + P+ F V S+ VM+SF++P G + + G + T L+ + S+ Sbjct: 164 DQPIKFIVKSDDVMHSFWVPIWGIKKALVPGETRSIVITPTALVDTSQNPLARVQCSWDC 223 Query: 212 GPGFSGMKFKAIATPDRAAFDQWVA 236 G G + M+ D+ F WVA Sbjct: 224 GLGHAQMRAVVKVVTDK-DFKAWVA 247 >UniRef50_A7HEB6 Cytochrome c oxidase subunit 2 n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HEB6_ANADF Length = 272 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 8/101 (7%) Query: 127 ITIEVVSMDWKWFFIYP--------EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 + IEV + W W YP E T+N+I P PV ++ S V++SF +P Sbjct: 129 VRIEVQAHQWAWQARYPGPDGRFNTEDDAVTLNDIRVPVGAPVLIQLASVDVIHSFNLPH 188 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 + A+ G TRL A G Y+ A + GP M+ Sbjct: 189 FRVKRDAVPGEITRLTFQARTAGEYEIACAQHCGPNHYKMR 229 >UniRef50_Q2YCN0 Cytochrome c oxidase subunit 2 n=4 Tax=Betaproteobacteria RepID=Q2YCN0_NITMU Length = 377 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 53/229 (23%) Query: 42 SLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILII 100 ++ + FG+M VI ++R S + N+ HS VE ++WT +P LI+ Sbjct: 57 AIFVGVFGVMFYSVI-----------QHRKSK--GYKAANFHHSTTVE-IIWTAIPFLIL 102 Query: 101 IFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY---PEQGIATVNEIA--- 154 I +A KT A++ + IT++ WKW + Y +GI ++ +A Sbjct: 103 IGMAFPATKTVIAMKDT-----SNPDITVKATGYQWKWGYDYLTGEGEGIGFLSALATPK 157 Query: 155 ----------------------FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTR 192 P V +T+N V++++++P LG + A+ G Sbjct: 158 AQIENAAPKGENYLLEVDKPLVVPTGKKVRVLITANDVLHAWWVPALGVKQDAIPGFIRD 217 Query: 193 LHLIANEPGTYDGISASYSGP--GFSGMKFKAIATPDRAAFDQWVAKAK 239 + +PGTY G A G GF + +A+ AA WVA+ K Sbjct: 218 VWFNIEKPGTYRGQCAELCGKEHGFMPIVVEAVEPEKYAA---WVAEQK 263 >UniRef50_A8UU91 Cytochrome c oxidase subunit 2 n=3 Tax=Aquificaceae RepID=A8UU91_9AQUI Length = 272 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 47/214 (21%) Query: 53 IVVIPAILMAVGFAWKYRASNK---DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWK 109 +V IP+++ V + +Y+ + D ++ +W +EA+ VP++I+++LA Sbjct: 48 VVAIPSLIFMVKY--RYKPGEREVGDQEHEGHWG----LEALWTIVPLIIVLYLA----- 96 Query: 110 TTHAL----EPSKPLAHDEKPITIEVVSMDWKWFFIYPE------QGIATV--------- 150 TH + KP E + ++V + W W F YP Q I Sbjct: 97 -THGFALFTQMRKP---PENAMELKVTAFAWGWMFQYPNGKMVIAQAIKDTEDKKCKPDE 152 Query: 151 ---------NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 N + PA P+ +TS V++SF++ G + G T N+PG Sbjct: 153 CYSVDGVFQNYVYVPAGVPIKAVLTSQDVIHSFYVQPAGVTQDMVPGRTTYTWFQINKPG 212 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 Y Y G S M F + + FD+W+ Sbjct: 213 EYWVFCREYCGQWHSRM-FAMLKVVPKEDFDKWL 245 >UniRef50_B8EPK1 Cytochrome c oxidase subunit 2 n=1 Tax=Methylocella silvestris BL2 RepID=B8EPK1_METSB Length = 303 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 32/218 (14%) Query: 48 FGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVL 106 F L+ I+V + + W Y N++ + N + V WTV P++I++ +A+ Sbjct: 67 FILLPIIVGICLFVLALLGWIYIRYNENKNPVATTTTHNSLLEVAWTVLPVMILVIIAIP 126 Query: 107 TWKT-THALEPSKPLAHDEKPITIEVVSMDWKWFFIYP-EQG------------------ 146 +++ TH L P A IT++ W W + YP +QG Sbjct: 127 SFRLLTHQL--VIPPAD----ITVKATGKQWFWTYDYPKDQGGGFSFDSYLIPESDLKPG 180 Query: 147 ----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 ++ NE P V+ VT V++SF IP G +I A+ G A G Sbjct: 181 DIRQLSVDNEAVVPVGKVVHMLVTGADVIHSFTIPSFGIRIDAVPGRMNETWFKAEREGI 240 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 Y G + G + M AI + W+ A + Sbjct: 241 YYGQCSKLCGKDHAYMPI-AIRVVSPETYSAWLVSAAK 277 >UniRef50_A5FJE3 Cytochrome c oxidase subunit 2 n=3 Tax=Flavobacteria RepID=A5FJE3_FLAJ1 Length = 396 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 72/282 (25%), Positives = 114/282 (40%), Gaps = 41/282 (14%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 L ++ +F LL N AL P + G SL+ + L+ V + + F++KY Sbjct: 55 LAFIYIFTIYGLLKWGNLALHTPASEHGGLVDSLMNITWVLIFTVQVITQGLLYWFSFKY 114 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 + NKD K + ++ SNK+EA+ +P ++ LA L +A + DE I I Sbjct: 115 KG-NKDKK-ALFFADSNKLEAIWSIIPSVV---LACLILYGLYAWNNIMFVDKDEDVIEI 169 Query: 130 EVVSMDWKWFFIYPEQ-------------GIAT---------------VNEIAFPANTPV 161 E+ + +KW Y Q GI T V+E+ P V Sbjct: 170 ELYAQQFKWTARYAGQDNVLGKANVRLIEGINTLGVDMSDPNSQDDIVVSELHIPKGKKV 229 Query: 162 YFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFK 221 +FK+ S V++S ++P +Q+ + GM T + TY +A Y F K Sbjct: 230 HFKMRSQDVLHSAYMPHFRAQMNCVPGMVTEFAFVP----TY--TTAEYRELPFMVEKVA 283 Query: 222 AIATPDRAAFDQWVAKAKQS--PNTMSDMAAFEKLAAPSEYN 261 I + VAK + P T + K+ S YN Sbjct: 284 NINKLRAEKSAELVAKGGTALDPYTFDYLLLCNKICGASHYN 325 >UniRef50_D0LJA9 Cytochrome c oxidase subunit 2 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJA9_HALO1 Length = 358 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 12/132 (9%) Query: 48 FGLMLIVVIPAILMAVGFAWKYRAS-NKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAV 105 F L + I + V F KYRA A+ SP H N V +WTV P LI + L + Sbjct: 51 FWLSVFCFIAITGVVVYFVIKYRARPGHKAQPSP---HHNDVMETIWTVIPALICVGLFI 107 Query: 106 LTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKV 165 W+ ++ + P H + ++VV+ W W F++P +V + PA+ V + Sbjct: 108 GGWRG--FVDVTSPPEH---ALEVQVVARSWSWEFVHPNGVKDSVLHV--PADRSVRLIM 160 Query: 166 TSNSVMNSFFIP 177 S V++SFF+P Sbjct: 161 KSEDVIHSFFVP 172 >UniRef50_Q3IRC8 Cytochrome c oxidase subunit 2 n=2 Tax=Halobacteriaceae RepID=Q3IRC8_NATPD Length = 250 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 31/206 (15%) Query: 40 QRSLILTAFGLMLIVVIP-AILMAVGFAW---KYRASNKDAKYSPNWSHSNKVEAVVWTV 95 Q LI +L IP AIL+ + K+R +N D P + N+ + WT+ Sbjct: 30 QDELITDLNTTLLYAAIPIAILVEAILIYAVVKFR-NNDD----PKPTEENRRLEITWTI 84 Query: 96 PI-LIIIFLAVLTWKT------------THALEPS---------KPLAHDEKPITIEVVS 133 ++++F+ +++ +EPS P H+E + IE+ + Sbjct: 85 ATAIVLLFVGFASYQVLAVEEVGNPLEDEDRIEPSVSEDLEGAVGPYEHEEDAVEIELEA 144 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 + W Y + ++ ++I P + PVY + ++ ++ +P L + A G + Sbjct: 145 YRYGWEASYADGEVSEFDQIRIPTDRPVYIHIYASDWLHMLHVPELNLKQSAFVGEYNTI 204 Query: 194 HLIANEPGTYDGISASYSGPGFSGMK 219 A E G++ Y G G S M Sbjct: 205 KTEAYEEGSHQFYCTEYCGTGHSQMN 230 >UniRef50_Q2NCF4 Cytochrome c oxidase subunit 2 n=6 Tax=Sphingomonadales RepID=Q2NCF4_ERYLH Length = 370 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 51/132 (38%), Gaps = 26/132 (19%) Query: 127 ITIEVVSMDWKWFFIYPEQG----------------------IATVNEIAFPANTPVYFK 164 ITI+ W W + YP+QG +A N + P P+ + Sbjct: 195 ITIKATGYQWYWGYTYPDQGGFEIISNMLDEADAMDRGLPGQLAVDNRMVVPVGVPLRIQ 254 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA 224 T+ V++SF +P L + A+ G LI +EPG Y G + G M A Sbjct: 255 TTAADVIHSFALPSLWFKNDAVPGRINEKMLIIDEPGIYYGQCSELCGARHGYMPIAVEA 314 Query: 225 TPDRAAFDQWVA 236 P DQW A Sbjct: 315 VP----MDQWRA 322 >UniRef50_A5GVD1 Cytochrome c oxidase subunit 2 n=11 Tax=Cyanobacteria RepID=A5GVD1_SYNR3 Length = 312 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 20/189 (10%) Query: 70 RASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTH---ALEPSKPLAHDEK 125 RA D Y + ++E + WT +P +++ +A + + AL P A Sbjct: 82 RADKYDESYGAPIEGNTRLE-ITWTLIPTVVVFAIAFYSMQVNDKLDALGPKHKYAIGTD 140 Query: 126 PIT------------IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNS 173 P+ I+V+S W W F+YP G+ + +E+ P N V F++ S V +S Sbjct: 141 PLVGAVEDPRATVGPIDVISRQWSWEFVYP-NGVRS-SELHLPINQRVNFRLISEDVNHS 198 Query: 174 FFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 F++P + + G + + G + A +SG +S + + +A +D Sbjct: 199 FYVPAFRLKQDIVPGSVISFSVTPTKEGRFRLRDAHFSGAYYSQNQTDVLVQ-SQAIYDD 257 Query: 234 WVAKAKQSP 242 W+ + P Sbjct: 258 WLKTTAKQP 266 >UniRef50_B8GPT4 Cytochrome c oxidase subunit 2 n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPT4_THISH Length = 380 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/212 (19%), Positives = 85/212 (40%), Gaps = 29/212 (13%) Query: 50 LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT---VPILIIIFLAVL 106 ++L+++ ++ ++ K R D ++ W W+ VP++++ + Sbjct: 62 ILLVIIFAVVIYSLIVHRKSRGYPADQRFHETWFGR-------WSWVFVPVMVLGVDLTI 114 Query: 107 TWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY--------------PEQGIATVNE 152 LE + D+ + ++V+ W W F+Y E GI + E Sbjct: 115 AGAAQKTLERVWVVPQDQPLLDVKVIGHQWYWEFVYLDHDVKIESRYVPKEEAGIHYLRE 174 Query: 153 I----AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 + P + V F T++ V+++F++P L + A+ G T + G + G A Sbjct: 175 VDNRLVLPTHQRVRFLHTASDVLHAFWVPELAVKKDAIPGYVTETWVNLTREGVFRGQCA 234 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 G + M + + + FD W+ + KQ Sbjct: 235 ELCGTWHARMPI-VVESVSQERFDAWIEEQKQ 265 >UniRef50_A9WMK9 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococcaceae RepID=A9WMK9_RENSM Length = 310 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 76/198 (38%), Gaps = 28/198 (14%) Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP-I 127 YR Y S + +E T+P+ +++ T + +++ A D P + Sbjct: 102 YRRRKDTVGYPRQMSANLPLEVFYLTIPLFMVLVFFYFTDRDQQSVD-----ARDPNPQV 156 Query: 128 TIEVVSMDWKWFFIY-----------------PEQGIATVNE----IAFPANTPVYFKVT 166 I+V W W F Y P G E + P N V F++ Sbjct: 157 KIDVRGKQWAWDFNYLAGNDISESVYEATTQTPLNGQPIDKEKLPTLYLPINQSVEFQLN 216 Query: 167 SNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATP 226 S V++SF++P + + G + L GT+DG A G S M F+ Sbjct: 217 SRDVIHSFWVPAFLQKRDMIPGKTNYITLTPKALGTFDGKCAELCGEYHSEMLFRVKVVT 276 Query: 227 DRAAFDQWVAKAKQSPNT 244 ++ F +AK KQ+ NT Sbjct: 277 EQ-EFQDHLAKLKQAGNT 293 >UniRef50_C6VT36 Cytochrome c oxidase subunit 2 n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VT36_DYAFD Length = 370 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 49/243 (20%) Query: 37 GLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVP 96 G L + G++ I I + F+WKY+ +K + + ++K+E + VP Sbjct: 81 GRRTDDLFWFSMGILTIPFIIVNFLVFFFSWKYQ--HKKGHRATFYPENHKLELIWTIVP 138 Query: 97 ILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY-------------- 142 +++ L W+ + P + IE+ + W Y Sbjct: 139 AIVMALLVFTGWRAWSDITAEAPRDAE----VIEITGKQFNWIARYGGVDNNKLGDYNYK 194 Query: 143 -----PEQGIATVNEIAF-----------PANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 E GI +E +F P PV K+ + V++S FIP + ++ A+ Sbjct: 195 LIDAQNEVGIDLSDENSFDDFTNPSEMHIPVGRPVLLKIRARDVLHSVFIPHMRVKMDAV 254 Query: 187 AGMQTRLHLIAN--------EPGT----YDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 G+ T+ +A+ E G Y+ G G MK + I D A + +W Sbjct: 255 PGLPTKFWFVADKTTADMRAETGNPKFDYEIACTEVCGQGHFSMKMRLIV-DDEATYKKW 313 Query: 235 VAK 237 VA+ Sbjct: 314 VAE 316 >UniRef50_P98054 Cytochrome c oxidase subunit 2 n=4 Tax=Cyanobacteria RepID=COX2_THEVL Length = 327 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 5/109 (4%) Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + ++V M + W F YP+ GI + E+ P V +++ V++SF++P+ + A+ Sbjct: 177 LVVDVAGMQYAWIFTYPDSGIVS-GELHIPVGKDVQLNLSARDVIHSFWVPQFRLKQDAI 235 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA-TPDRAAFDQW 234 G+ T A + GTY + A G M+ + I TP+ F+ W Sbjct: 236 PGVPTT-RFKATKVGTYPVVCAELCGGYHGAMRTQVIVHTPED--FETW 281 >UniRef50_B8H5D8 Cytochrome c oxidase subunit 2 n=6 Tax=Caulobacteraceae RepID=B8H5D8_CAUCN Length = 331 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 36/216 (16%) Query: 51 MLIVVIPAI-LMAVGF-AWKYRASNKDAK-YSPNWSHSNKVEAVVWTV-PILIIIFLAVL 106 +L+ +I AI L+ +G W NK A + +SH+ +E V+WTV P+LI++ +A+ Sbjct: 84 ILMPIITAITLLVLGLLIWIVVRYNKKANPVAAKFSHNTTIE-VIWTVVPVLILMVIAIF 142 Query: 107 TWKTT-HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV------NEIAFPANT 159 +++ H + KP +T++ W W + YP+Q ++ + E A Sbjct: 143 SFRLLFHYNDMPKP------DLTVKATGYQWYWGYEYPDQKVSEIISLPLTKEQAEAKKV 196 Query: 160 PVYF----------------KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 P +VT+ V+++F +P G + A+ G A+ G + Sbjct: 197 PYLLAADNAMVVPVNKVVRVQVTAADVIHAFALPAFGLKTDAIPGRLNETWFKADRTGVF 256 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G + G + M + I +A FD WV KAK Sbjct: 257 YGQCSELCGVDHAFMPIE-IKVVTQAEFDAWV-KAK 290 >UniRef50_B6IXF5 Cytochrome c oxidase subunit 2 n=6 Tax=Alphaproteobacteria RepID=B6IXF5_RHOCS Length = 285 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 44/243 (18%) Query: 34 GQIGLEQRS----LILTAFGLMLIVVIPAILMAV-----GFAWKYRASNKDAKYSPNWSH 84 G +GL+Q + L +F +L+V+I AI + V W++RAS P+ + Sbjct: 38 GGLGLQQAASPVKQQLDSFHDLLLVIITAITLLVLALLIYVMWRFRASKNPV---PSRTS 94 Query: 85 SNKVEAVVWTVPILIIIFLAVL-TWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 N V V WTV ++I+ + + +++ + ++ + E +T++V W W + YP Sbjct: 95 HNTVLEVAWTVIPVVILVVIAIPSFQLLYFMDRTP-----EADMTVKVTGRQWYWSYEYP 149 Query: 144 EQG---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 + G + N + P V VT++ V++S+ IP LG + Sbjct: 150 DHGNIAFDSFMLSEDEVPDPKLRLLEVDNRLVVPVGANVRVLVTASDVIHSWAIPSLGIK 209 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGP--GFSGMKFKAIATPDRAAFDQWVAKAKQ 240 A+ G A+ G + G + G GF + +A++ + FD WVA+ Sbjct: 210 KDAVPGRLNETWFRADAEGVFYGQCSEICGTNHGFMPIAVEAVS---KERFDAWVAEKTV 266 Query: 241 SPN 243 + N Sbjct: 267 ALN 269 >UniRef50_B2JCA5 Cytochrome c oxidase subunit 2 n=109 Tax=Proteobacteria RepID=B2JCA5_BURP8 Length = 557 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 45/235 (19%) Query: 15 LFAGTVLLSGCNSA--------LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 LFAG L G + L P +I E SL F L+L VI + V F Sbjct: 26 LFAGAALAVGDSPGGPRVNEINLQPPVTRIAEELYSL--HTFMLILCTVIFIGVFGVMFY 83 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTVP-ILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 + + N+ S VE ++WTV +I++ +A+ KT A++ + Sbjct: 84 SIFAHRKSKGYKAANFHESTTVE-IIWTVVPFIIVVLMALPATKTVVAMKDTT-----NA 137 Query: 126 PITIEVVSMDWKWFFIY---PEQGI----------ATV---------------NEIAFPA 157 +T++V WKW + Y P +GI A V N + P Sbjct: 138 DLTVKVTGYQWKWAYDYVKGPGEGINFFSTLTTPRAEVDGRQPITDTYLQEVDNPLVVPV 197 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 N + T+N V++S+++P G + A+ G A + GTY G G Sbjct: 198 NKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFRAEKVGTYRGFCTELCG 252 >UniRef50_O78682 Cytochrome c oxidase subunit 2 n=572 Tax=cellular organisms RepID=COX2_CARAU Length = 230 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 29/172 (16%) Query: 85 SNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY- 142 S ++E +VWT+ P +I++ +A+ + + + ++ ++ +TI+ + W W + Y Sbjct: 58 SQEIE-IVWTILPAVILVLIALPSLRILYLMDEI-----NDPHLTIKAMGHQWYWSYEYT 111 Query: 143 ------------PEQGIA--------TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 P Q +A T + + P +PV V++ V++S+ +P LG + Sbjct: 112 DYENLGFDSYMVPTQDLAPGQFRLLETDHRMVVPMESPVRILVSAEDVLHSWAVPSLGVK 171 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 + A+ G + IA+ PG + G + G S M A P F+ W Sbjct: 172 MDAVPGRLNQTAFIASRPGVFYGQCSEICGANHSFMPIVVEAVP-LEHFENW 222 >UniRef50_Q47R64 Cytochrome c oxidase subunit 2 n=4 Tax=Streptosporangineae RepID=Q47R64_THEFY Length = 314 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/207 (20%), Positives = 93/207 (44%), Gaps = 29/207 (14%) Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWK-TTHALEPSKPLAHDEKPI 127 YR + + P ++ +EA+ +PI+++ L T + T+ LE +P + Sbjct: 83 YR--KRSEQLPPQVRYNMPIEALYTVLPIIVVSVLFYFTARDQTYLLETDEPAD-----V 135 Query: 128 TIEVVSMDWKWFFIYPEQ-----------GIATVNE-----IAFPANTPVYFKVTSNSVM 171 ++V + W W F Y ++ G+ + ++ + P+++ V+F + + V+ Sbjct: 136 YVDVNAFQWSWQFTYEDELDVNGNPVSVAGVPSTSKDELPVLVLPSDSVVHFDLEAPDVI 195 Query: 172 NSFFIPRLGSQIYAMAGM--QTRLHLIANEPGTYDGISASYSGPGFSGMKFK-AIATPDR 228 +SF+IP ++ + G + ++ + G Y+G A G S M F + TP+ Sbjct: 196 HSFWIPAFAFKLDVIPGHPNEFQVKIKPGVEGDYEGRCAELCGYDHSRMLFTLRVVTPEE 255 Query: 229 AAFDQWVAKAKQSPNTMSDMAAFEKLA 255 + W+ + K +P + + E+ A Sbjct: 256 --YRAWIEEQKANPQELPAVPDLEEEA 280 >UniRef50_A0LTG9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTG9_ACIC1 Length = 280 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 27/232 (11%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSALLD----PKGQIGLEQRSLILTAFGLMLIVVIP 57 R R +G L G L SGC + L P QR L L G + + Sbjct: 20 RRRSVVVRIGLLVALVG--LTSGCTANDLPRLGMPTPITAQAQRVLRLWQGGWAAALFVG 77 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 I+ + +D +P +++ +E + VP++ + T + + + + Sbjct: 78 CIVWGLIIWCVIAYRKRDGAQAPQTTYNVPIEVLYTVVPVIFVAVFFYFTARDENYV--T 135 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIY---PEQGIATVNEIA------------FPANTPVY 162 K AH + +T+EVV W W F Y P+ V ++ PA V Sbjct: 136 KLSAHPD--VTVEVVGYQWDWQFNYLSGPQPDAPIVAQVTGDAAHGHPATLELPAGETVR 193 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMAGMQTR--LHLIANEPGTYDGISASYSG 212 FK+ S V+++F++P + + G + +H+ A++ GTY G G Sbjct: 194 FKLVSPDVIHAFWVPNFLFKRDVIPGRMSEFDVHIDADKQGTYIGRCTELCG 245 >UniRef50_Q766X1 Cytochrome c oxidase subunit 2 n=30 Tax=Coelomata RepID=Q766X1_VARHI Length = 233 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 37/191 (19%) Query: 76 AKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 +Y+ + + +WT VP+ +++FLAV + K + +E +T++ + Sbjct: 48 TRYTSRFLLEQQTLETIWTIVPVFMLLFLAVPSLKILYMVE-----ELTSPQVTLKAIGH 102 Query: 135 DWKWFFIY-------PEQGIATVNEIAF-----------------------PANTPVYFK 164 W W + Y PE +T+N ++ P+NT Sbjct: 103 QWYWTYEYSIPDTNNPEYSTSTINFDSYMLPESALLPQDFRNYEVDHRPLLPSNTQCRVL 162 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA 224 TS V++++ +P G + A+ G ++ ++ N PG Y G G S M A Sbjct: 163 TTSTDVIHAWGVPSFGVKADALPGRINQIPVLINAPGIYYGSCMELCGTNHSFMPIVVEA 222 Query: 225 TPDRAAFDQWV 235 P F++W+ Sbjct: 223 HP-LTEFNEWI 232 >UniRef50_C7I249 Cytochrome c oxidase subunit 2 n=1 Tax=Thiomonas intermedia K12 RepID=C7I249_THIIN Length = 288 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 33/150 (22%) Query: 122 HDEKPITIEVVSMDWKWFFIY---PEQGI-------------------------ATVNEI 153 H + +T++ WKW + Y P +GI A +E+ Sbjct: 126 HSDSFMTVKATGAQWKWGYDYMAGPGKGISFWSTLTTPYSEIYEGKDLPSNFVLAVDHEL 185 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 P + + TS+ V++ F++ LG Q+ A+ G A + GTY G A G Sbjct: 186 VVPVDKKIKIVTTSDDVLHGFYVNSLGVQMDAIPGFVRSTWFTAEKTGTYYGQCAQICGK 245 Query: 214 --GFSGMKFKAIATPDRAAFDQWVAKAKQS 241 F + K + P+ ++QWVA+ K++ Sbjct: 246 YHAFMPIVIKVVTMPE---YEQWVAQWKKA 272 >UniRef50_B3RBU3 Cytochrome c oxidase subunit 2 n=28 Tax=Proteobacteria RepID=B3RBU3_CUPTR Length = 454 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 31/143 (21%) Query: 127 ITIEVVSMDWKWFFIYP--------------------------EQGIATV----NEIAFP 156 + +EVV W W F +P +G+ + E+ P Sbjct: 124 MVMEVVGQQWSWAFRFPGKSGQLGASDARFVTGANPLGLDPDDPRGLDNIVIVGPEVHLP 183 Query: 157 ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 N PV + S V++ F++P +++ + GM T + G +D + A G G Sbjct: 184 LNQPVKVLLRSKDVLHDFYVPPFRARMNMVPGMVTSFWFTPTQTGRFDILCAQLCGVGHY 243 Query: 217 GMKFKAIATPDRAAFDQWVAKAK 239 M+ + + AAF+ W+AK + Sbjct: 244 NMR-GTVVVEEPAAFEAWLAKQQ 265 >UniRef50_C1XPU9 Cytochrome c oxidase subunit 2 n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XPU9_9DEIN Length = 271 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 33/142 (23%) Query: 127 ITIEVVSMDWKWFFIYPEQ----GIATVNE--------------------------IAFP 156 + +EV++ W W + YP + G A++ +A P Sbjct: 118 MVVEVLTQQWLWSYRYPGKDGILGPASIKRFTPANQFGLDPQAPASQDDIPVLGGPLALP 177 Query: 157 ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 PV ++ SN V++SF++P + + GM T L + G + I A G G Sbjct: 178 VGQPVLLRMRSNDVLHSFYVPEFRVKWDVVPGMVTELWFTPTKTGEFQVICAELCGVGHY 237 Query: 217 GMKFKAIAT-PDRAAFDQWVAK 237 M K + PD AF +W+++ Sbjct: 238 SMVGKVVVMEPD--AFQKWLSE 257 >UniRef50_A3MXJ3 Cytochrome c oxidase subunit 2 n=3 Tax=Pyrobaculum RepID=A3MXJ3_PYRCJ Length = 149 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 I+V + W F YP G T NE+ ++TS V++SF+I LG + A+ Sbjct: 52 VIKVYGRQFSWVFEYP-NGTKTFNELVIERGKLYKLEITSLDVVHSFYIRELGIKYDAVP 110 Query: 188 GMQTRLHLIANEPGTYDGISASYSG 212 G + L ++PG Y+ + A Y G Sbjct: 111 GFWYTMWLQVDKPGVYNILCAEYCG 135 >UniRef50_A1ZL76 Cytochrome c oxidase subunit 2 n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZL76_9SPHI Length = 305 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 89/238 (37%), Gaps = 53/238 (22%) Query: 46 TAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLA 104 T L++ V+ A L F ++Y+ NK + + N +K+E + WT+ P +I+ L Sbjct: 43 TVVILIMFVITNAALFYFAFRYRYKKENKASFFPEN----HKLE-IAWTITPAIILTVLV 97 Query: 105 VLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG----------IATVNEIA 154 K + P + +E+V + W YP + I NE+ Sbjct: 98 FYGNKVWWDIMGEVPKDAE----VVEIVGQQFAWKTRYPGKDKKMGNYDYRLIDATNELG 153 Query: 155 ------------------FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL- 195 P N P+ FK+ + V++S F P ++ A+ GM T+ H Sbjct: 154 IDFGHKDANDDFVSGKLVLPVNRPILFKIRAKDVLHSVFAPHFRLKMDAVPGMPTQFHFT 213 Query: 196 -----------IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 + N Y+ G G M+ + + A + +W A QSP Sbjct: 214 PTKTTAQMRSELGNPKFNYEIACTEICGKGHYSMRL-LVEVVEEAEYKKWY--ASQSP 268 >UniRef50_A3IST1 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IST1_9CHRO Length = 302 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 6/144 (4%) Query: 129 IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 IEV++ W+W F Y + I T +E+ P N PV + + V++ F++P + + Sbjct: 152 IEVIAKQWEWTFHYSQANITT-SELHLPQNQPVRLILEAEDVIHGFYVPEFRFKQDIIPN 210 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKA-IATPDRAAFDQWVAKAKQSPNTMSD 247 + G Y + +SG F+ M+ I +P+ + QW+ + ++ ++ Sbjct: 211 HPLDFTFTPQKQGKYKLHDSQFSGTYFALMEADVYIDSPE--GYRQWL-NSTENKEIKAN 267 Query: 248 MAAFEKLAAPSEYNQVEYFSNVKP 271 +AA E PS+ ++ VKP Sbjct: 268 LAATE-YTHPSQQLIQSHWPTVKP 290 >UniRef50_C7M190 Cytochrome c oxidase subunit II n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M190_ACIFD Length = 257 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 14/150 (9%) Query: 80 PNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKP-ITIEVVSMDWK 137 P H N + +T VPILI+ L T + + ++ A +KP + ++V + W Sbjct: 90 PKQVHGNTPLEIFYTAVPILIVAVLFFFTVRVENKVD-----AVAKKPALRVDVTAFQWG 144 Query: 138 WFFIYPEQGIATVNE-------IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 W F+YP + + + + P F++ SN V++ F +P YA+ G+ Sbjct: 145 WKFVYPSYHVTEITQGPTGYPTLVLPVGETSTFRLVSNDVVHGFDLPNFDFSRYALPGVV 204 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKF 220 ++ G + G + M F Sbjct: 205 NYFDFTPQHDASFVGRCSHLCGLYHADMLF 234 >UniRef50_Q114N6 Cytochrome c oxidase subunit 2 n=9 Tax=Cyanobacteria RepID=Q114N6_TRIEI Length = 339 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/117 (20%), Positives = 53/117 (45%), Gaps = 2/117 (1%) Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 A + + +++ + + W YP+ G+ E+ P N + +++ V++SF+IP Sbjct: 177 AGKQADVIVDITGIQYGWLMNYPDSGVFA-GELHIPVNKDIQINLSAQDVIHSFWIPAFR 235 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 + A+ G +T+L +A + G Y A G + G + + + W+ + Sbjct: 236 LKQDAIPGKETQLRFVATKIGEYPVYCAELCG-SYHGAMRTTVVVQTQEEYAAWIEE 291 >UniRef50_C6QIT1 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QIT1_9RHIZ Length = 325 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Query: 147 IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 +A EIA P N V VTS V++S+ IP G ++ A+ G + + A + GT+ G Sbjct: 207 LAVDQEIAVPVNKVVTMLVTSADVIHSWTIPSFGVKMQAVPGRTSAVWFKATKLGTFTGQ 266 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 + G S M + D+ +D W+A K Sbjct: 267 CSVLCGKLHSAMPI-VVRVVDQPVYDSWMAALK 298 >UniRef50_Q47G11 Cytochrome c oxidase subunit 2 n=2 Tax=Betaproteobacteria RepID=Q47G11_DECAR Length = 401 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 27/132 (20%) Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFP-----------------ANTPVYFKV---- 165 + ++V M WKW + YPE G+ ++ +A P + PV V Sbjct: 141 LVLKVTGMQWKWQYEYPEAGVKFISTLATPRDQITNAEAKGEHYLLEVDKPVVLPVGKKV 200 Query: 166 ----TSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP--GFSGMK 219 TS V++++++P+ G + A+ G ++ +PG Y G A G GF + Sbjct: 201 RVLLTSIDVIHTWWVPQFGVKRDAIPGFLRETWVLIEKPGIYRGQCAELCGKDHGFMPVV 260 Query: 220 FKAIATPDRAAF 231 A+ P+ A+ Sbjct: 261 VHAVPEPEYLAW 272 >UniRef50_Q83GL9 Cytochrome c oxidase subunit 2 n=2 Tax=Tropheryma whipplei RepID=Q83GL9_TROWT Length = 290 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 24/171 (14%) Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 +R D P ++ VE ++ +P++++ V + + + A+ KP + Sbjct: 87 FRRKRSDTTLPPQVQYNLPVETLLTGLPLILVAVFFVFSIRVSDAVNLPKP-----ADVH 141 Query: 129 IEVVSMDWKWFFI--------------YPEQGIATVNE-----IAFPANTPVYFKVTSNS 169 I V+ W W F+ Y E V+E + P N V + S Sbjct: 142 IGVIGKQWAWDFVYFDSNTYFPGLQAQYIESSPGKVDESKLPVLYLPVNKKVEIDLRSRD 201 Query: 170 VMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF 220 V++SF+I + + G+ R++ G Y G A + G S M F Sbjct: 202 VVHSFWIIDFLYKRDIVPGLTNRIYFTPTRIGEYRGKCAEFCGEFHSAMLF 252 >UniRef50_A6CA06 Cytochrome c oxidase subunit 2 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CA06_9PLAN Length = 336 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 29/210 (13%) Query: 43 LILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIII 101 L + F +LIV + + M ++YR + + N + N + W+V P L+ I Sbjct: 39 LWVCTFFFVLIVGLMLLFMV---KYRYRPGVE----AENTATHNLTLELSWSVIPTLLTI 91 Query: 102 FLAVLTW-KTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP 160 V+ W T L+ P A + I+VV+ W W F YP I + E+ P + Sbjct: 92 ---VMFWVGFTSYLDMRTPPAASYQ---IDVVAKKWVWAFKYPNGWIES--ELHIPLDEN 143 Query: 161 VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDG------------ISA 208 V + S+ V++S +IP +++ + G T+ A P +G + + Sbjct: 144 VTLTMASDDVIHSLWIPAFRTKMDVVPGRYTQEWFKAIAPPVPEGEESVEYPLEYPLMCS 203 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 Y G S M K + R FD+W+ A Sbjct: 204 EYCGTKHSEMVTKVVVHETRGDFDKWLQAA 233 >UniRef50_Q1YMW9 Putative cytochrome oxidase subunit II n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMW9_MOBAS Length = 364 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Query: 124 EKPITIEVVSMDWKWFFIY-----PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 E IEV + + W Y P + T NE+ P PV ++ S V++SF++P Sbjct: 145 EPSFMIEVTAQQFWWEARYVDPDDPARSFETANELHIPLGEPVRIRLRSTDVIHSFWVPA 204 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKA-IATPD 227 L + A+ G + + G Y G Y G + M + + PD Sbjct: 205 LSGKTDAIPGQINETWIQGDRVGVYRGQCTEYCGQQHTNMAMRMFVDAPD 254 >UniRef50_A5FT26 Putative uncharacterized protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FT26_ACICJ Length = 60 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 25/40 (62%) Query: 106 LTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 + W TH L+P + +A ++ + + V +DWKW FIYP + Sbjct: 1 MLWHYTHTLDPYRRIASNQPALEVLAVGLDWKWLFIYPTR 40 >UniRef50_Q9B8A2 Cytochrome c oxidase subunit 2 n=2 Tax=Nematoda RepID=Q9B8A2_TRISP Length = 225 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 31/221 (14%) Query: 35 QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT 94 Q SL+L F +++++ +IL+ V W Y + + S H K +WT Sbjct: 10 QDSYNHSSLLLINFMDWVMIMMLSILILV--LWIYMGTLFTSSNSLMLDH--KWLEFLWT 65 Query: 95 V-PILIIIFLAVLTWKTTHALE--PSKPLAHDEKPITIEVVSMDWKWFFIYPE------- 144 + P+ +++ +A ++ K + E P+ P +++++ W W + YP+ Sbjct: 66 ISPLGVLLSMASMSMKALYTEEGLPTPP------ALSLKITGHQWYWTYNYPDFNLEFDS 119 Query: 145 ----------QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 + + N + P P+ VTS V++S+ IP LG ++ AM G Sbjct: 120 YMKEWESQDFRLLDCDNRVVLPTQVPIRMSVTSADVIHSWTIPSLGIKMDAMPGRINSTT 179 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 + PG G + G S M I +AF WV Sbjct: 180 TESTLPGVIYGQCSELCGVNHSFMPI-TIEFTTISAFKSWV 219 >UniRef50_A4FAC2 Cytochrome c oxidase subunit 2 n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FAC2_SACEN Length = 302 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 23/186 (12%) Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP---- 143 +E + +P ++++ L T T +KP D K + VVS W W F YP Sbjct: 88 LEIIYSAIPFVMVVVLFYFT-AVTQNYVLAKPANPDVK---VNVVSFQWNWEFNYPGYKT 143 Query: 144 --EQGIATVNE------IAFPANTPVYFKVTSNSVMNSFFIPR--LGSQIYAMAGMQTRL 193 Q + TV + P ++ V + ++S V++SFF+P + + Sbjct: 144 PDGQPVRTVGSSEEIPLLVLPTDSSVEYHLSSTDVIHSFFVPEFHFKRDTFPHPDKNNQD 203 Query: 194 HLIAN---EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA-KAKQSPNTMSDMA 249 ++ N G++ G A G S M F+ A + FDQ++ + + +P T S Sbjct: 204 NVFQNTIDREGSFVGRCAELCGTYHSMMNFEVRAL-SKDKFDQYMQLRTRINPQTGSPYT 262 Query: 250 AFEKLA 255 A E L Sbjct: 263 ASEALG 268 >UniRef50_C7QBL1 Cytochrome c oxidase subunit 2 n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QBL1_CATAD Length = 287 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 26/181 (14%) Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 IL V F YR + ++ +E + VP ++I L T A + SK Sbjct: 55 ILWCVIF---YRRKRTGIEIPAQTRYNVPIEVLFTVVPFIMIAVLFFFT-----AKDESK 106 Query: 119 PLA-HDEKPITIEVVSMDWKWFFIYPEQGIA---TVNEIA--------------FPANTP 160 LA H + I VV W W + Y ++ T ++A P N Sbjct: 107 LLALHKNPDVKINVVGRQWSWSWNYNYDAVSQQDTPGQLAVYDAGTPADLPVLWLPVNER 166 Query: 161 VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF 220 V F +TS V++SF++P ++ + G L ++ G + G A G S M F Sbjct: 167 VRFTLTSTDVIHSFWVPNFLFKLDVVPGRVNEFELTPSKEGEFIGRCAELCGVDHSRMLF 226 Query: 221 K 221 K Sbjct: 227 K 227 >UniRef50_A3VPG7 Cytochrome c oxidase subunit 2 n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPG7_9PROT Length = 392 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 127 ITIEVVSMDWKWFFIYPEQG--------------------IATVNEIAFPANTPVYFKVT 166 +TI+ + W W ++YP+ G +AT N++ PA + Sbjct: 235 VTIKAIGFQWGWSYVYPDFGDFEFDALMAPKDSVPSNLYRLATTNDVVVPAGETIRIATV 294 Query: 167 SNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATP 226 V++S+ +P G +I A+ G GTY G + G + M ++ Sbjct: 295 GRDVIHSWAMPAFGIKIDAIPGRYNETWFYTENEGTYYGQCSEMCGLDHAFMPI-SVRVV 353 Query: 227 DRAAFDQWVAKAKQ 240 R F+ WV + + Sbjct: 354 SRPEFEAWVNEQAE 367 >UniRef50_A1Z3B2 Cytochrome c oxidase subunit 2 n=1 Tax=Romanomermis iyengari RepID=A1Z3B2_9BILA Length = 221 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 26/181 (14%) Query: 75 DAKYSPNW----SHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 ++ Y+ NW SH +E ++WTV P+L+++FL + + K + E +H +T+ Sbjct: 44 NSMYNKNWTQGFSHWLALE-LIWTVSPVLVLLFLGLPSLKLLYLSEIYNFSSH----MTV 98 Query: 130 EVVSMDWKWFFIYPEQGIATV---------------NEIAFPANTPVYFKVTSNSVMNSF 174 +++ W W + +PE I + N + P + ++S+ V++S+ Sbjct: 99 KIMGHQWYWEYNFPEYNINIMGFPKILSKFIRLGEANILVLPFKMKIRSIISSSDVIHSW 158 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 +P +G ++ A+ G L+ + PG + G + G S M I + + F +W Sbjct: 159 ALPSMGFKMDAIPGRLNFYMLMFSIPGKFFGQCSELCGVYHSWMPI-MIESNSISIFFEW 217 Query: 235 V 235 + Sbjct: 218 M 218 >UniRef50_P00403 Cytochrome c oxidase subunit 2 n=2315 Tax=Fungi/Metazoa group RepID=COX2_HUMAN Length = 227 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 28/158 (17%) Query: 83 SHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI 141 S + ++E V WT+ P +I++ +A+ + + + + ++ +TI+ + W W + Sbjct: 56 SDAQEMETV-WTILPAIILVLIALPSLRILYMTDEV-----NDPSLTIKSIGHQWYWTYE 109 Query: 142 YPEQG---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 Y + G + N + P P+ +TS V++S+ +P LG Sbjct: 110 YTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSWAVPTLG 169 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM 218 + A+ G + A PG Y G + G S M Sbjct: 170 LKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFM 207 >UniRef50_Q2J8B8 Cytochrome c oxidase subunit 2 n=4 Tax=Frankia RepID=Q2J8B8_FRASC Length = 316 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 21/164 (12%) Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP-ITIEVVSMDWKWFFIYPEQG 146 VE + VP++I+ L T + + P KP +T++V++ W W F Y + G Sbjct: 130 VEVLYTVVPVVIVAGLFFYTARDESEVTKLSP-----KPDVTVDVIAFRWNWQFKYLDTG 184 Query: 147 IATVNE--------------IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTR 192 + P N + F +S V++SF++P + + G + Sbjct: 185 SGRQGANPIEVTGRPGEPAVLVLPQNRSIRFVESSPDVIHSFWVPEFLFKRDVIPGRVNQ 244 Query: 193 LHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 L + GT+ G A G M F P +A +D ++A Sbjct: 245 FELTITKTGTFIGRCAELCGTDHDRMNFYVKVVP-QAEYDTFIA 287 >UniRef50_A5VD54 Cytochrome c oxidase subunit 2 n=3 Tax=Alphaproteobacteria RepID=A5VD54_SPHWW Length = 338 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 40/216 (18%) Query: 44 ILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIF 102 I+T + ++++I +++ ++RA A P+ + N + +VWT VP+LI++ Sbjct: 89 IITVISIFVLILIGYVVI------RFRAK---ANPVPSKTSHNTLIEIVWTLVPVLILLV 139 Query: 103 LAVLTWKT-THALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--------------- 146 +AV + + H KP +TI+V+ W W + YP+ G Sbjct: 140 IAVPSIRLLAHQYAQPKP------DLTIKVIGNQWYWTYQYPDNGDFELVSNMLPDAEAK 193 Query: 147 -------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 +A + P + V VTSN V++S+ +P +++ A+ G A Sbjct: 194 KRGEPRMLAVDERVVVPVDAVVKVIVTSNDVIHSWAVPAFWTKMDAVPGRLNETWFKAER 253 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 G Y G + G M A+ + F +WV Sbjct: 254 EGLYYGQCSELCGARHGFMPI-AVEVVSKDKFAEWV 288 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ABJ2 Ubiquinol oxidase subunit 2 n=150 Tax=Proteobact... 480 e-134 UniRef50_Q9I427 Ubiquinol oxidase subunit 2 n=143 Tax=Proteobact... 366 e-100 UniRef50_Q2SXM9 Ubiquinol oxidase, subunit II n=79 Tax=cellular ... 352 1e-95 UniRef50_C3K1U7 Cytochrome C oxidase (Ubiquinol oxidase) subunit... 340 3e-92 UniRef50_C6BF43 Ubiquinol oxidase, subunit II n=10 Tax=Proteobac... 340 4e-92 UniRef50_Q4K7G6 Cytochrome o ubiquinol oxidase, subunit II n=1 T... 338 2e-91 UniRef50_C0RGA6 Ubiquinol oxidase, subunit II n=37 Tax=Proteobac... 338 2e-91 UniRef50_A1BCC4 Ubiquinol oxidase, subunit II n=36 Tax=Proteobac... 338 2e-91 UniRef50_B0UDY1 Ubiquinol oxidase, subunit II n=26 Tax=Proteobac... 336 5e-91 UniRef50_A9IQC4 Ubiquinol oxidase polypeptide II n=1 Tax=Bordete... 336 7e-91 UniRef50_P57544 Ubiquinol oxidase subunit 2 n=4 Tax=Buchnera aph... 335 1e-90 UniRef50_Q8K993 Ubiquinol oxidase subunit 2 n=6 Tax=Gammaproteob... 335 1e-90 UniRef50_Q0KB46 Bo3-type quinol oxidase, subunit II n=2 Tax=Burk... 333 7e-90 UniRef50_C5SNE1 Ubiquinol oxidase, subunit II n=1 Tax=Asticcacau... 332 1e-89 UniRef50_B3QMY7 Ubiquinol oxidase, subunit II n=1 Tax=Chlorobacu... 332 1e-89 UniRef50_C9YAW0 Ubiquinol oxidase subunit 2 n=1 Tax=Curvibacter ... 332 1e-89 UniRef50_Q1GEA0 Ubiquinol oxidase subunit II n=2 Tax=Proteobacte... 331 2e-89 UniRef50_B4SM49 Ubiquinol oxidase, subunit II n=4 Tax=Proteobact... 326 5e-88 UniRef50_Q0BNW9 Cytochrome o ubiquinol oxidase subunit II n=16 T... 326 5e-88 UniRef50_Q6F9R5 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 321 1e-86 UniRef50_Q5FPP7 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 321 2e-86 UniRef50_Q2C3Z7 Cytochrome O ubiquinol oxidase subunit II n=3 Ta... 321 3e-86 UniRef50_B0VM15 Cytochrome o ubiquinol oxidase subunit II n=14 T... 319 6e-86 UniRef50_C6XEZ5 Ubiquinol oxidase, subunit II n=1 Tax=Candidatus... 319 1e-85 UniRef50_Q0FH64 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 316 6e-85 UniRef50_C4XNK3 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 315 1e-84 UniRef50_D0ST29 Ubiquinol oxidase, subunit II n=2 Tax=Acinetobac... 315 1e-84 UniRef50_A4G8I7 Ubiquinol oxidase subunit 2 (Ubiquinol oxidase p... 313 6e-84 UniRef50_Q89AA3 Ubiquinol oxidase subunit 2 n=1 Tax=Buchnera aph... 313 6e-84 UniRef50_Q2C912 Cytochrome o ubiquinol oxidase, subunit II n=1 T... 309 6e-83 UniRef50_B6YZ13 Ubiquinol oxidase, subunit II n=1 Tax=Pseudovibr... 309 9e-83 UniRef50_C8SDL6 Ubiquinol oxidase, subunit II n=1 Tax=Mesorhizob... 309 1e-82 UniRef50_A0NWL4 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia ... 305 1e-81 UniRef50_Q8L312 Cytochrome bo subunit A n=1 Tax=Vitreoscilla sp.... 302 1e-80 UniRef50_A9KG38 Cytochrome c oxidase polypeptide II n=7 Tax=Legi... 302 1e-80 UniRef50_B9R6J2 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia ... 301 1e-80 UniRef50_C6CSR8 Quinol oxidase AA3, subunit II n=2 Tax=Paenibaci... 301 2e-80 UniRef50_D0D3A4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella ... 300 5e-80 UniRef50_A1UU71 Cytochrome o ubiquinol oxidase, subunit II n=5 T... 296 5e-79 UniRef50_Q6MBY6 Probable cytochrome o ubiquinol oxidase chain II... 293 8e-78 UniRef50_C0Z7C6 Quinol oxidase polypeptide II n=1 Tax=Brevibacil... 290 4e-77 UniRef50_B9NVN8 CytOchrome o ubiquinol oxidase, subunit II n=2 T... 282 1e-74 UniRef50_C1PAT6 Quinol oxidase AA3, subunit II n=1 Tax=Bacillus ... 281 2e-74 UniRef50_C8WSR0 Cytochrome c oxidase subunit II n=1 Tax=Alicyclo... 279 9e-74 UniRef50_B1YIW4 Cytochrome c oxidase subunit 2 n=2 Tax=Exiguobac... 275 1e-72 UniRef50_C0Z582 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillale... 274 4e-72 UniRef50_A0R9Y2 Quinol oxidase, subunit 2 (Cytochrome c oxidase,... 273 5e-72 UniRef50_Q81HT3 Quinol oxidase subunit 2 n=80 Tax=Bacillaceae Re... 271 2e-71 UniRef50_Q725F6 Quinol oxidase AA3, subunit II n=17 Tax=Listeria... 271 2e-71 UniRef50_D0DDN4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella ... 269 7e-71 UniRef50_P34957 Quinol oxidase subunit 2 n=10 Tax=Bacillales Rep... 269 1e-70 UniRef50_Q67ML2 Cytochrome c oxidase subunit 2 n=1 Tax=Symbiobac... 268 2e-70 UniRef50_C6NXQ9 Cytochrome O ubiquinol oxidase subunit II n=1 Ta... 266 6e-70 UniRef50_A4YQP6 Cytochrome o ubiquinol oxidase, subunit II n=3 T... 266 6e-70 UniRef50_B1HVF0 Quinol oxidase subunit 2 n=6 Tax=Bacillaceae Rep... 264 3e-69 UniRef50_Q1NHQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Sphingomo... 263 5e-69 UniRef50_Q04441 Cytochrome c oxidase subunit 2 n=5 Tax=Bacillus ... 262 9e-69 UniRef50_B5ENJ7 COX aromatic rich domain protein n=4 Tax=Acidith... 262 9e-69 UniRef50_Q057E8 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 260 4e-68 UniRef50_Q4L565 Probable quinol oxidase subunit 2 n=63 Tax=Bacil... 259 1e-67 UniRef50_C8WTG4 Cytochrome c oxidase subunit 2 n=2 Tax=Alicyclob... 256 5e-67 UniRef50_Q5SLI2 Cytochrome c oxidase subunit 2 n=4 Tax=Thermus R... 256 1e-66 UniRef50_A7NPW1 Cytochrome c oxidase subunit 2 n=2 Tax=Roseiflex... 255 2e-66 UniRef50_B9KZ00 Cytochrome c oxidase subunit 2 n=1 Tax=Thermomic... 254 2e-66 UniRef50_C6IYW1 Cytochrome c oxidase subunit 2 n=1 Tax=Paenibaci... 252 1e-65 UniRef50_D1C449 Cytochrome c oxidase subunit 2 n=1 Tax=Sphaeroba... 251 2e-65 UniRef50_Q8ER77 Cytochrome c oxidase subunit 2 n=1 Tax=Oceanobac... 251 3e-65 UniRef50_C6IYM5 Quinol oxidase subunit II n=2 Tax=Bacillales Rep... 249 8e-65 UniRef50_Q0AI63 Cytochrome c oxidase, subunit II n=1 Tax=Nitroso... 248 2e-64 UniRef50_C6D2I7 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillale... 246 6e-64 UniRef50_A5FXH9 Cytochrome c oxidase, subunit II n=1 Tax=Acidiph... 240 4e-62 UniRef50_B7DNN6 Cytochrome c oxidase subunit II n=1 Tax=Alicyclo... 240 5e-62 UniRef50_Q2IK63 Cytochrome c oxidase, subunit II n=3 Tax=Anaerom... 236 6e-61 UniRef50_C5D863 Cytochrome c oxidase subunit 2 n=87 Tax=cellular... 231 2e-59 UniRef50_D1CCH9 Cytochrome c oxidase, subunit II n=1 Tax=Thermob... 231 4e-59 UniRef50_A4A2K3 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopir... 230 5e-59 UniRef50_C1SI89 Cytochrome c oxidase subunit 2 n=1 Tax=Denitrovi... 229 1e-58 UniRef50_A9LGT2 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomy... 227 6e-58 UniRef50_C1XKJ9 Cytochrome c oxidase subunit 2 n=2 Tax=Meiotherm... 226 6e-58 UniRef50_B3Q582 Probable cytochrome c oxidase protein, subunit I... 226 9e-58 UniRef50_A5GCS3 Cytochrome C oxidase subunit II, transmembrane r... 225 1e-57 UniRef50_Q0ABY9 Cytochrome c oxidase subunit 2 n=1 Tax=Alkalilim... 225 2e-57 UniRef50_Q1H1C0 Cytochrome c oxidase subunit 2 n=1 Tax=Methyloba... 223 5e-57 UniRef50_B1ZVF0 Cytochrome c oxidase subunit 2 n=2 Tax=Verrucomi... 222 1e-56 UniRef50_D1YAK0 Cytochrome c oxidase subunit 2 n=3 Tax=Propionib... 222 2e-56 UniRef50_A9WF38 Cytochrome c oxidase subunit 2 n=3 Tax=Chlorofle... 222 2e-56 UniRef50_A4VKM4 Heme/copper-type cytochrome/quinol oxidase, subu... 220 4e-56 UniRef50_C1A5N6 Cytochrome c oxidase subunit 2 n=1 Tax=Gemmatimo... 220 5e-56 UniRef50_Q39Z27 Cytochrome c oxidase subunit 2 n=4 Tax=Geobacter... 220 5e-56 UniRef50_C1F1C9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidobact... 220 5e-56 UniRef50_A9B5D1 Cytochrome c oxidase subunit 2 n=1 Tax=Herpetosi... 219 1e-55 UniRef50_D1RCQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Legionell... 219 1e-55 UniRef50_A3K373 Cytochrome o ubiquinol oxidase, subunit II n=1 T... 218 2e-55 UniRef50_B1ZMS7 Cytochrome c oxidase subunit 2 n=2 Tax=Opitutace... 217 4e-55 UniRef50_Q04PG8 Cytochrome c oxidase subunit 2 n=7 Tax=Bacteria ... 215 1e-54 UniRef50_Q01PD2 Cytochrome c oxidase subunit 2 n=1 Tax=Candidatu... 215 1e-54 UniRef50_A9F508 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium... 214 3e-54 UniRef50_D0MDE2 Cytochrome c oxidase subunit 2 n=3 Tax=Rhodother... 214 4e-54 UniRef50_Q72B26 Cytochrome c oxidase subunit 2 n=6 Tax=Desulfovi... 214 4e-54 UniRef50_C8SJH9 Cytochrome c oxidase, subunit II n=1 Tax=Mesorhi... 214 5e-54 UniRef50_C1ZF25 Cytochrome c oxidase, subunit II n=1 Tax=Plancto... 213 6e-54 UniRef50_Q0BPU5 Cytochrome c oxidase subunit 2 n=1 Tax=Granuliba... 213 7e-54 UniRef50_Q3A1J0 Cytochrome c oxidase subunit 2 n=2 Tax=Desulfuro... 213 8e-54 UniRef50_Q5P900 Chain II protein of putative cytochrome c oxidas... 211 3e-53 UniRef50_UPI0000510271 cytochrome C oxidase subunit II n=1 Tax=B... 211 3e-53 UniRef50_Q2W5A1 Cytochrome c oxidase subunit 2 n=3 Tax=Magnetosp... 211 3e-53 UniRef50_A9VZ92 Cytochrome c oxidase, subunit II n=9 Tax=Alphapr... 210 5e-53 UniRef50_B2JCA5 Cytochrome c oxidase subunit 2 n=109 Tax=Proteob... 210 5e-53 UniRef50_UPI0001C164F8 cytochrome C oxidase subunit II, transmem... 210 6e-53 UniRef50_C6B8H8 Cytochrome c oxidase, subunit II n=1 Tax=Rhizobi... 210 6e-53 UniRef50_A8IDL7 Cytochrome c oxidase subunit 2 n=29 Tax=Alphapro... 209 8e-53 UniRef50_A7H8L3 Cytochrome c oxidase subunit II n=7 Tax=Cystobac... 209 1e-52 UniRef50_B0UJY9 Cytochrome c oxidase, subunit II n=6 Tax=Rhizobi... 208 2e-52 UniRef50_C6B875 Cytochrome c oxidase, subunit II n=4 Tax=Rhizobi... 208 2e-52 UniRef50_Q3JAA7 Cytochrome c oxidase, subunit II n=3 Tax=Bacteri... 208 2e-52 UniRef50_A9WMK9 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococc... 208 2e-52 UniRef50_Q0VNA0 Cytochrome c oxidase subunit 2 n=2 Tax=Alcanivor... 208 3e-52 UniRef50_D2X915 Cytochrome c oxidase subunit II n=1 Tax=Sorangiu... 207 5e-52 UniRef50_A6C0L0 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomy... 207 6e-52 UniRef50_B4DA33 Cytochrome c oxidase subunit 2 n=1 Tax=Chthoniob... 207 6e-52 UniRef50_Q11EK7 Cytochrome c oxidase, subunit II n=3 Tax=Rhizobi... 206 7e-52 UniRef50_Q46SU8 Cytochrome c oxidase, subunit II:Cytochrome c, c... 206 9e-52 UniRef50_Q089E4 Cytochrome c oxidase subunit 2 n=102 Tax=cellula... 205 2e-51 UniRef50_Q1YUZ5 Cytochrome c oxidase subunit 2 n=1 Tax=gamma pro... 205 2e-51 UniRef50_Q01R98 Cytochrome c oxidase, subunit II n=1 Tax=Candida... 204 3e-51 UniRef50_B4WPA2 Cytochrome c oxidase subunit 2 n=2 Tax=Cyanobact... 204 3e-51 UniRef50_D2PZ51 Cytochrome c oxidase, subunit II n=1 Tax=Kribbel... 204 3e-51 UniRef50_Q1NHI1 Cytochrome c oxidase, subunit IIc n=1 Tax=Sphing... 204 3e-51 UniRef50_Q1V0P2 Cytochrome c oxidase subunit 2 n=2 Tax=Candidatu... 204 4e-51 UniRef50_Q7NIL9 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobact... 204 4e-51 UniRef50_A6GFM7 Cytochrome c oxidase subunit 2 n=1 Tax=Plesiocys... 204 5e-51 UniRef50_A9F8S3 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium... 203 7e-51 UniRef50_A0KDK6 Cytochrome c, monohaem n=47 Tax=Burkholderia Rep... 203 8e-51 UniRef50_Q3J6Q8 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosoco... 202 1e-50 UniRef50_Q2YCN0 Cytochrome c oxidase subunit 2 n=4 Tax=Betaprote... 202 1e-50 UniRef50_A8TIJ6 Cytochrome c oxidase subunit 2 n=1 Tax=alpha pro... 202 1e-50 UniRef50_B1M0S7 Cytochrome c oxidase, subunit II n=1 Tax=Methylo... 202 2e-50 UniRef50_Q0AMG7 Cytochrome c oxidase subunit 2 n=2 Tax=Hyphomona... 202 2e-50 UniRef50_Q2YBV3 Cytochrome c oxidase, subunit II n=1 Tax=Nitroso... 202 2e-50 UniRef50_A8LTQ3 Cytochrome c oxidase subunit II n=1 Tax=Dinorose... 201 3e-50 UniRef50_B8IHG8 Cytochrome c oxidase, subunit II n=2 Tax=Rhizobi... 201 3e-50 UniRef50_D0KXM7 Cytochrome c oxidase subunit 2 n=1 Tax=Halothiob... 201 3e-50 UniRef50_B6IRX5 Cytochrome c oxidase subunit 2 n=1 Tax=Rhodospir... 200 5e-50 UniRef50_Q7USM3 Cytochrome-c oxidase chain II/c n=1 Tax=Rhodopir... 200 5e-50 UniRef50_Q3JBQ1 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosoco... 200 5e-50 UniRef50_Q7NMM6 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobact... 199 1e-49 UniRef50_B2JRY1 Cytochrome c oxidase, subunit II n=2 Tax=Burkhol... 199 1e-49 UniRef50_UPI0000164D05 cytochrome c oxidase, subunit II n=1 Tax=... 197 5e-49 UniRef50_D2R8Q4 Cytochrome c oxidase, subunit II n=1 Tax=Pirellu... 196 8e-49 UniRef50_B7KCJ0 Cytochrome c oxidase subunit 2 n=12 Tax=Cyanobac... 196 1e-48 UniRef50_C1VBF5 Cytochrome c oxidase subunit 2 n=1 Tax=Halogeome... 196 1e-48 UniRef50_UPI0001C30E64 cytochrome c oxidase, subunit II n=1 Tax=... 195 1e-48 UniRef50_A4A0M8 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopir... 195 2e-48 UniRef50_D2RSI3 Cytochrome c oxidase, subunit II n=1 Tax=Haloter... 194 3e-48 UniRef50_C7NIK2 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococc... 194 3e-48 UniRef50_Q2JUD7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechoco... 194 4e-48 UniRef50_Q02BQ9 Cytochrome c oxidase subunit 2 n=3 Tax=Bacteria ... 194 4e-48 UniRef50_B0C0A3 Cytochrome c oxidase subunit 2 n=1 Tax=Acaryochl... 193 6e-48 UniRef50_B0RXK0 Cytochrome c oxidase subunit 2 n=13 Tax=Gammapro... 193 6e-48 UniRef50_B6IXF5 Cytochrome c oxidase subunit 2 n=6 Tax=Alphaprot... 193 7e-48 UniRef50_B5WPG4 Cytochrome c oxidase, subunit II n=2 Tax=Burkhol... 193 9e-48 UniRef50_C1DG42 Cytochrome c oxidase subunit 2 n=5 Tax=Gammaprot... 193 9e-48 UniRef50_Q114N6 Cytochrome c oxidase subunit 2 n=9 Tax=Cyanobact... 193 9e-48 UniRef50_C5CCB5 Cytochrome c oxidase subunit 2 n=1 Tax=Micrococc... 192 1e-47 UniRef50_B5INR0 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanobium... 192 1e-47 UniRef50_A5PDP5 Putative cytochrome c oxidase chain II protein n... 192 2e-47 UniRef50_Q31JY7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechoco... 192 2e-47 UniRef50_A6CA06 Cytochrome c oxidase subunit 2 n=1 Tax=Planctomy... 191 3e-47 UniRef50_B8ES67 Cytochrome c oxidase, subunit II n=1 Tax=Methylo... 190 6e-47 UniRef50_A4WT84 Cytochrome c, monohaem n=9 Tax=Rhodobacteraceae ... 189 9e-47 UniRef50_B8EPK1 Cytochrome c oxidase subunit 2 n=1 Tax=Methyloce... 189 1e-46 UniRef50_Q1J1C4 Cytochrome c oxidase subunit 2 n=2 Tax=Deinococc... 189 1e-46 UniRef50_B8H5D8 Cytochrome c oxidase subunit 2 n=6 Tax=Caulobact... 189 2e-46 UniRef50_B8GPT4 Cytochrome c oxidase subunit 2 n=1 Tax=Thioalkal... 188 2e-46 UniRef50_Q47G11 Cytochrome c oxidase subunit 2 n=2 Tax=Betaprote... 187 3e-46 UniRef50_C7P0B0 Cytochrome c oxidase subunit 2 n=3 Tax=Halobacte... 187 4e-46 UniRef50_Q5V3P5 Cytochrome c oxidase subunit 2 n=1 Tax=Haloarcul... 187 4e-46 UniRef50_A7BSH7 Cytochrome c oxidase aa3, subunit II n=1 Tax=Beg... 187 4e-46 UniRef50_Q06474 Cytochrome c oxidase subunit 2 n=48 Tax=root Rep... 187 5e-46 UniRef50_D2UBE6 Putative cytochrome c oxidase, subunit II protei... 186 9e-46 UniRef50_D0LN58 Cytochrome c oxidase, subunit II n=1 Tax=Haliang... 186 9e-46 UniRef50_B3CN60 Cytochrome c oxidase subunit 2 n=7 Tax=Wolbachia... 186 9e-46 UniRef50_A9BE64 Cytochrome c oxidase subunit 2 n=25 Tax=cellular... 186 1e-45 UniRef50_Q07JU2 Cytochrome c oxidase, subunit II n=6 Tax=Alphapr... 185 1e-45 UniRef50_D1ATW6 Cytochrome c oxidase subunit 2 n=9 Tax=Anaplasma... 185 1e-45 UniRef50_Q47R64 Cytochrome c oxidase subunit 2 n=4 Tax=Streptosp... 185 2e-45 UniRef50_P24011 Cytochrome c oxidase subunit 2 n=13 Tax=Bacillal... 184 3e-45 UniRef50_P98054 Cytochrome c oxidase subunit 2 n=4 Tax=Cyanobact... 183 6e-45 UniRef50_A3ZTG0 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopir... 183 9e-45 UniRef50_D0LJA9 Cytochrome c oxidase subunit 2 n=1 Tax=Haliangiu... 182 1e-44 UniRef50_B9KJJ8 Cytochrome c, monoheme n=5 Tax=Alphaproteobacter... 182 2e-44 UniRef50_D2QS53 Cytochrome c oxidase subunit II n=1 Tax=Spirosom... 182 2e-44 UniRef50_A0LTG9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidother... 182 2e-44 UniRef50_A1ZL76 Cytochrome c oxidase subunit 2 n=1 Tax=Microscil... 180 4e-44 UniRef50_A8UU91 Cytochrome c oxidase subunit 2 n=3 Tax=Aquificac... 180 5e-44 UniRef50_B4RAU6 Cytochrome c oxidase, subunit II n=1 Tax=Phenylo... 180 7e-44 UniRef50_C6VT36 Cytochrome c oxidase subunit 2 n=1 Tax=Dyadobact... 180 8e-44 UniRef50_C5CVJ0 Cytochrome c oxidase, subunit II n=1 Tax=Variovo... 179 1e-43 UniRef50_Q3SQ74 Cytochrome c oxidase, subunit II n=1 Tax=Nitroba... 179 1e-43 UniRef50_A5G0I4 Cytochrome c oxidase subunit 2 n=1 Tax=Acidiphil... 179 1e-43 UniRef50_C6XZ37 Cytochrome c oxidase subunit 2 n=2 Tax=Pedobacte... 177 3e-43 UniRef50_Q83GL9 Cytochrome c oxidase subunit 2 n=2 Tax=Tropherym... 177 4e-43 UniRef50_A3Z005 Cytochrome c oxidase subunit 2 n=1 Tax=Synechoco... 177 6e-43 UniRef50_C5CLF6 Cytochrome c oxidase, subunit II n=5 Tax=Burkhol... 174 3e-42 UniRef50_A9IUK7 Cytochrome-c oxidase chain II/c n=2 Tax=Betaprot... 174 4e-42 UniRef50_Q1RI44 Probable cytochrome c oxidase subunit 2 n=19 Tax... 173 4e-42 UniRef50_C7M190 Cytochrome c oxidase subunit II n=1 Tax=Acidimic... 173 6e-42 UniRef50_B1Y7T1 Cytochrome c oxidase subunit 2 n=3 Tax=Proteobac... 173 6e-42 UniRef50_B3RBU3 Cytochrome c oxidase subunit 2 n=28 Tax=Proteoba... 173 9e-42 UniRef50_C1XPU9 Cytochrome c oxidase subunit 2 n=1 Tax=Meiotherm... 172 2e-41 UniRef50_A5GVD1 Cytochrome c oxidase subunit 2 n=11 Tax=Cyanobac... 171 3e-41 UniRef50_B2J6R2 Cytochrome c oxidase subunit 2 n=6 Tax=Nostocace... 170 4e-41 UniRef50_Q5V019 Cytochrome c oxidase subunit 2 n=2 Tax=Halobacte... 170 4e-41 UniRef50_Q1YMW9 Putative cytochrome oxidase subunit II n=1 Tax=A... 169 9e-41 UniRef50_C7I249 Cytochrome c oxidase subunit 2 n=1 Tax=Thiomonas... 169 1e-40 UniRef50_D2RUF7 Cytochrome c oxidase, subunit II n=2 Tax=Halobac... 169 1e-40 UniRef50_Q3M753 Cytochrome c oxidase subunit 2 n=6 Tax=Nostocace... 168 2e-40 UniRef50_B8HMH5 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanothec... 167 4e-40 UniRef50_Q05FH0 Cytochrome O ubiquinol oxidase subunit II n=1 Ta... 165 2e-39 UniRef50_Q9B8D8 Cytochrome c oxidase subunit 2 n=150 Tax=Eukaryo... 165 2e-39 UniRef50_Q6KZG1 Cytochrome c oxidase polypeptide II n=1 Tax=Picr... 165 3e-39 UniRef50_C6QIT1 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomicr... 164 3e-39 UniRef50_A7HQK3 Cytochrome c oxidase subunit II n=1 Tax=Parvibac... 164 3e-39 Sequences not found previously or not previously below threshold: UniRef50_A6WD34 Cytochrome c oxidase subunit 2 n=4 Tax=Actinomyc... 194 5e-48 UniRef50_B5ZEX4 Cytochrome c oxidase, subunit II n=2 Tax=Glucona... 193 6e-48 UniRef50_C7MCD6 Cytochrome c oxidase subunit 2 n=1 Tax=Brachybac... 192 2e-47 UniRef50_B0RIL0 Cytochrome c oxidase subunit 2 n=6 Tax=Actinobac... 190 5e-47 UniRef50_B2S9W4 Cytochrome c oxidase subunit 2 n=61 Tax=Alphapro... 187 5e-46 UniRef50_D1BTQ6 Cytochrome c oxidase subunit 2 n=2 Tax=Micrococc... 184 3e-45 UniRef50_A1SLF8 Cytochrome c oxidase subunit 2 n=1 Tax=Nocardioi... 183 6e-45 UniRef50_C9YTU0 Cytochrome c oxidase subunit 2 n=1 Tax=Streptomy... 182 1e-44 UniRef50_C7QBL1 Cytochrome c oxidase subunit 2 n=1 Tax=Catenulis... 182 1e-44 UniRef50_Q9X814 Probable cytochrome c oxidase subunit 2 n=21 Tax... 180 6e-44 UniRef50_UPI00016C5496 cytochrome c oxidase, subunit II n=1 Tax=... 178 3e-43 UniRef50_Q2J8B8 Cytochrome c oxidase subunit 2 n=4 Tax=Frankia R... 177 4e-43 UniRef50_P08306 Cytochrome c oxidase subunit 2 n=28 Tax=Rhodobac... 177 4e-43 UniRef50_Q03736 Cytochrome c oxidase subunit 2 n=11 Tax=Rhodobac... 176 9e-43 UniRef50_UPI0001C31709 cytochrome c oxidase, subunit II n=1 Tax=... 176 1e-42 UniRef50_A5VD54 Cytochrome c oxidase subunit 2 n=3 Tax=Alphaprot... 176 1e-42 UniRef50_Q11SZ4 Cytochrome c oxidase subunit 2 n=1 Tax=Cytophaga... 175 2e-42 UniRef50_C6XR85 Cytochrome c oxidase subunit 2 n=1 Tax=Hirschia ... 173 5e-42 UniRef50_P74044 Cytochrome c oxidase subunit 2 n=1 Tax=Synechocy... 173 6e-42 UniRef50_B4B7G4 Cytochrome c oxidase subunit 2 n=3 Tax=Cyanobact... 170 7e-41 UniRef50_C7PG38 Cytochrome c oxidase subunit 2 n=1 Tax=Chitinoph... 168 2e-40 UniRef50_C8XCY3 Cytochrome c oxidase subunit 2 n=1 Tax=Nakamurel... 168 3e-40 UniRef50_C6W9F6 Cytochrome c oxidase subunit 2 n=1 Tax=Actinosyn... 166 7e-40 UniRef50_Q0C3D3 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomona... 165 2e-39 UniRef50_C6WU65 Cytochrome c oxidase subunit 2 n=2 Tax=Betaprote... 164 3e-39 UniRef50_Q167W2 Cytochrome c oxidase subunit 2 n=5 Tax=Rhodobact... 164 4e-39 UniRef50_A4FAC2 Cytochrome c oxidase subunit 2 n=1 Tax=Saccharop... 164 4e-39 >UniRef50_P0ABJ2 Ubiquinol oxidase subunit 2 n=150 Tax=Proteobacteria RepID=CYOA_ECOL6 Length = 315 Score = 480 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 315/315 (100%), Positives = 315/315 (100%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL Sbjct: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL Sbjct: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG Sbjct: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ Sbjct: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH Sbjct: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 Query: 301 EGMEGMDMSHAESAH 315 EGMEGMDMSHAESAH Sbjct: 301 EGMEGMDMSHAESAH 315 >UniRef50_Q9I427 Ubiquinol oxidase subunit 2 n=143 Tax=Proteobacteria RepID=CYOA_PSEAE Length = 331 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 174/305 (57%), Positives = 226/305 (74%), Gaps = 4/305 (1%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWK 68 +L WLSL A +LL GC+ L +PKGQ+G+++R+LI+TA LMLIVVIP I+M + FAWK Sbjct: 9 ALKWLSL-APALLLGGCDMTLFNPKGQVGMDERTLIITATLLMLIVVIPVIVMTLAFAWK 67 Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 YRASN A+Y P+W HSN++EAVVW VP +II L +TW++TH L+P +PL + KP+T Sbjct: 68 YRASNTQAEYKPDWHHSNRIEAVVWLVPCVIIAILGWITWESTHKLDPYRPLDSEVKPVT 127 Query: 129 IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 I+ VS+DWKW FIYPEQGIATVNEIAFP +TPV F++TS+SVMNSFFIP+LGSQIY+MAG Sbjct: 128 IQAVSLDWKWLFIYPEQGIATVNEIAFPKDTPVNFQITSDSVMNSFFIPQLGSQIYSMAG 187 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM 248 M T+LHLIANE G +DGISA+YSG GFSGM+FKAIAT ++ F WVAK K +P ++S + Sbjct: 188 MMTKLHLIANEEGVFDGISANYSGGGFSGMRFKAIATSEQ-GFQDWVAKVKAAPASLS-I 245 Query: 249 AAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHE-GMEGMD 307 + +L PSE YFS+V P+LF ++ K+ HG + E + HE M G D Sbjct: 246 GTYPELVKPSENVPPTYFSSVSPELFGHILTKYEHHGDAKGAAHGEHAGAEHEAAMTGHD 305 Query: 308 MSHAE 312 M + Sbjct: 306 MQDMD 310 >UniRef50_Q2SXM9 Ubiquinol oxidase, subunit II n=79 Tax=cellular organisms RepID=Q2SXM9_BURTA Length = 377 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 161/294 (54%), Positives = 215/294 (73%), Gaps = 7/294 (2%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCN-SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 R+ ++ L L AG LSGC+ +LDPKG IG ++SLI T+ MLIVV+P I Sbjct: 85 RITSRASAILRLGLVAG---LSGCSELHVLDPKGAIGAAEKSLIATSTWAMLIVVVPVIF 141 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 + + FAW+YRASN++A Y+P W+HS +E V+WTVP LII+FL +LTWKTTHAL+P +P+ Sbjct: 142 LTLLFAWRYRASNRNATYAPKWAHSTAIEIVIWTVPSLIILFLGILTWKTTHALDPYRPI 201 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 KPI +EVV++DWKW F+YPE GIA+VN++A P TP+ F++TS+SVMNSFFIP+LG Sbjct: 202 ESSVKPIDVEVVALDWKWLFVYPELGIASVNQLAVPVGTPINFRITSDSVMNSFFIPQLG 261 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 +Q+YAMAGMQTRLHLIA+EPG + GISA+YSG GFS MKF+ +AT R AFD WVAK + Sbjct: 262 TQVYAMAGMQTRLHLIADEPGDFAGISANYSGRGFSDMKFRTLAT-SRDAFDAWVAKVRA 320 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPE 294 S + + DM A+ +LA PSE V Y+S V LF ++I K+ +G +D+T Sbjct: 321 SADRL-DMTAYSQLAQPSEKQPVRYYSTVDSRLFHNIIAKYN-NGHVLDLTDAA 372 >UniRef50_C3K1U7 Cytochrome C oxidase (Ubiquinol oxidase) subunit II n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K1U7_PSEFS Length = 331 Score = 340 bits (873), Expect = 3e-92, Method: Composition-based stats. Identities = 166/304 (54%), Positives = 218/304 (71%), Gaps = 2/304 (0%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M +Y + LG+L L ++L GC L+DPKGQIGL+QR+LI+TA LML+VV+P I+ Sbjct: 19 MSKNRYPRLLGFLPLLGMMLMLGGCKWTLMDPKGQIGLDQRNLIITATLLMLLVVVPVII 78 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 M FAWKYRASN +A Y+P WSHS K+E VW VPILIII L +T+K+TH L+P +PL Sbjct: 79 MTFAFAWKYRASNTNATYAPKWSHSTKIEIAVWLVPILIIIALGYITYKSTHELDPYRPL 138 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 D KPI IEVV++DWKW FIYP+ GIATVN+I FP NTP+ F++TS++VMNSFFIP LG Sbjct: 139 ESDVKPINIEVVALDWKWLFIYPDLGIATVNQIRFPENTPLNFRITSDAVMNSFFIPALG 198 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 QIYAMAGMQTRLHLIANE +GISA+YSG GF+GMKFKAI+T + F+ WVA+ K Sbjct: 199 GQIYAMAGMQTRLHLIANEKAEMEGISANYSGAGFTGMKFKAIST-SQEDFNAWVAEVKA 257 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 +P + D A ++ L PS+ N V +S +P+LF +++K+ + + E +A Sbjct: 258 APKQL-DQAEYDALTKPSQNNPVALYSTYEPNLFQKIVDKYEGMKPGKPVKHEKKEVAAV 316 Query: 301 EGME 304 EG + Sbjct: 317 EGSD 320 >UniRef50_C6BF43 Ubiquinol oxidase, subunit II n=10 Tax=Proteobacteria RepID=C6BF43_RALP1 Length = 340 Score = 340 bits (872), Expect = 4e-92, Method: Composition-based stats. Identities = 155/284 (54%), Positives = 209/284 (73%), Gaps = 7/284 (2%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 GCN +LDPKG I E+++LIL A GLML+VVIP I++ + FAWKYRASN A+Y P+WS Sbjct: 35 GCNLTVLDPKGMIAAEEKTLILVATGLMLLVVIPVIVLTLVFAWKYRASNTKARYEPDWS 94 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 HSN +EAVVW +P LIII L V+T+K+THAL+P KP+ D KPIT+E VS+DWKW FIYP Sbjct: 95 HSNAIEAVVWLIPCLIIIVLGVITYKSTHALDPYKPIESDVKPITVEAVSLDWKWLFIYP 154 Query: 144 EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 E IATVN++AFPANTP+ FK+TS++VMN+FFIP+LGSQ+YAMAGMQT+LHLIANE G + Sbjct: 155 ELKIATVNQLAFPANTPINFKITSDTVMNAFFIPQLGSQVYAMAGMQTKLHLIANETGVF 214 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQV 263 DG+S++YSG GF+GMKFKA A + FD WV + + S ++ + +L+ PSE Sbjct: 215 DGMSSNYSGSGFTGMKFKATAMTNE-EFDAWVKQVRASSQNLTKEG-YAELSKPSEKVPP 272 Query: 264 EYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMD 307 +++V P L+ +++K+M M + E + E +EG + Sbjct: 273 AAYASVDPMLYHSILHKYMDK-----MGEGEKVLTLDEALEGAN 311 >UniRef50_Q4K7G6 Cytochrome o ubiquinol oxidase, subunit II n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K7G6_PSEF5 Length = 303 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 138/303 (45%), Positives = 209/303 (68%), Gaps = 4/303 (1%) Query: 8 KSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 +++ + L A LLS CN + +PKGQI ++R+LI+ A GLML+VVIP I++ FAW Sbjct: 2 QTINKILLVAACGLLSACNLIVFNPKGQIATDERNLIILATGLMLLVVIPVIVLMFVFAW 61 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 +YR+++K A+YSP W+ S+++EAVVW VP++II+ L ++TW+TTH+L+P KP+A D P+ Sbjct: 62 RYRSTSKRARYSPGWASSHRIEAVVWGVPLVIIVILGIVTWRTTHSLDPYKPIASDNPPL 121 Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 ++VV+ DWKW FIYP+ GIA+VNE+A P +TPV F +TS++ M SFFIP LG QIYAMA Sbjct: 122 NVQVVATDWKWLFIYPDLGIASVNELALPVHTPVSFTITSDAAMTSFFIPALGGQIYAMA 181 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD 247 GMQTRLHLIANE G + GI+A+Y+GPGFS M F + A F+ WV + +Q P + D Sbjct: 182 GMQTRLHLIANETGQFRGIAANYNGPGFSDMHFTTQSQ-TPAQFEAWVQRVRQGPLRL-D 239 Query: 248 MAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF--MAHGKSMDMTQPEGEHSAHEGMEG 305 ++ L+ P+ + ++++++V+P LF +++K+ M + ++ E Sbjct: 240 QQSYAVLSRPTLGHPIQHYASVEPGLFQVIVDKYEGMNKARGSARQAARADNPLGEARSS 299 Query: 306 MDM 308 D+ Sbjct: 300 DDV 302 >UniRef50_C0RGA6 Ubiquinol oxidase, subunit II n=37 Tax=Proteobacteria RepID=C0RGA6_BRUMB Length = 342 Score = 338 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 148/299 (49%), Positives = 201/299 (67%), Gaps = 5/299 (1%) Query: 8 KSLGWLSLFAGTVLLSGC-NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 +++ ++ A + L+GC N LLDPKGQ+GLE+R LIL A G+ML+VV+P IL + FA Sbjct: 7 RTIVSFAVLALSAFLAGCQNQVLLDPKGQVGLEERDLILFATGIMLLVVVPVILATLFFA 66 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP 126 WKYRA+N+ A Y P+W HS K+E VW +P+ II+ L +TW +TH L+P +PL + KP Sbjct: 67 WKYRATNEKADYQPDWHHSTKIELAVWLIPMAIIVVLGTVTWISTHKLDPYRPLESNVKP 126 Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 I +EVV++DWKW FIYP+QGIATVNE+A P N PV FK+TS+++MNSFFIP+LGSQ+Y M Sbjct: 127 INVEVVALDWKWLFIYPDQGIATVNEMAMPVNVPVNFKLTSSNLMNSFFIPQLGSQVYTM 186 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 MQT+LHLIAN+ G + GISA+YSG GF+ M+FKA A D+A FD+WVA K Sbjct: 187 PSMQTKLHLIANQEGDFAGISANYSGQGFAQMRFKAHAF-DQAGFDKWVADVKAQAAAKG 245 Query: 247 ---DMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEG 302 D A + L PSE + V+YF+ LF D++N+ + + E Sbjct: 246 EDLDRARYASLVQPSEKHAVQYFNYGDKALFHDIVNRCWDGKSVCLDDEMHRQQMIREA 304 >UniRef50_A1BCC4 Ubiquinol oxidase, subunit II n=36 Tax=Proteobacteria RepID=A1BCC4_PARDP Length = 400 Score = 338 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 139/320 (43%), Positives = 196/320 (61%), Gaps = 16/320 (5%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 +RK+ + L WL+L L+ C + +L P G + QR L++ + LML++++P +++ Sbjct: 4 IRKFAR-LPWLALLIP---LAACKAEVLAPAGDVAARQRDLLVISTLLMLLIIVPVMVLT 59 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA- 121 V FA +YR NKDA Y P+W HS K+E V+W P+LIII L LTW TH L+P +PL Sbjct: 60 VVFARRYRERNKDADYRPDWDHSTKLEFVIWGAPLLIIITLGALTWVGTHLLDPYRPLDR 119 Query: 122 --------HDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNS 173 + +P+ ++VV+MDWKW FIYPEQGIA+VNE+A P + PV F +TS SVMN+ Sbjct: 120 ISADRPLTEEHRPLPVQVVAMDWKWLFIYPEQGIASVNEMAVPVDRPVEFTLTSTSVMNA 179 Query: 174 FFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 F+IP + IYAM GM+T+L+ + N PG Y GI++ YSG GFSGM FKA AT D A FD Sbjct: 180 FYIPAMAGMIYAMPGMETKLNGVFNHPGEYKGIASHYSGHGFSGMHFKAHAT-DEAGFDA 238 Query: 234 WVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQP 293 W+ KA+ S T+ D + +L APSE F+ V P LF ++N + GK Sbjct: 239 WIEKARASGGTL-DRPRYLELEAPSENVPPMSFAEVDPHLFQRIVNMCVEPGKICMAEMM 297 Query: 294 EGEHSAHEGMEG-MDMSHAE 312 + G+ G M+M+ Sbjct: 298 ALDAQGGTGLAGTMNMTRLT 317 >UniRef50_B0UDY1 Ubiquinol oxidase, subunit II n=26 Tax=Proteobacteria RepID=B0UDY1_METS4 Length = 426 Score = 336 bits (863), Expect = 5e-91, Method: Composition-based stats. Identities = 134/303 (44%), Positives = 186/303 (61%), Gaps = 14/303 (4%) Query: 14 SLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 +L A L+GCN +++P G + ++QR+LIL + LML+V++P I + FAW+YRASN Sbjct: 39 ALLAVAGSLAGCNLVVMNPSGDVAIQQRNLILASTALMLLVIVPVIALTFVFAWRYRASN 98 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH---------DE 124 DA Y P+W HS ++E V+WTVP+LIII L +TW +TH L+P +PLA Sbjct: 99 HDAPYDPDWHHSTQLEVVIWTVPLLIIIALGAMTWVSTHTLDPYRPLARIGPNKPVPPGI 158 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 + ++VV++DWKW F+YP+ GIATVNE+A PAN P+ FK+TS+SV N+F++P L IY Sbjct: 159 DHLNVQVVALDWKWLFLYPDLGIATVNEMAAPANVPIAFKITSSSVWNTFYVPALAGMIY 218 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 AM GMQT LH + N G + G SA YSG GFS M F + + FD WVAK K S Sbjct: 219 AMPGMQTNLHAVMNHEGDFRGQSAHYSGSGFSRMNFDFRSL-SQQGFDAWVAKVKASGTA 277 Query: 245 MSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGME 304 + D AA+ L PSE + V Y+ V+ L+ ++ + G+ M E H G Sbjct: 278 L-DRAAYLALEKPSEADPVRYYGRVESGLYDAILGLCVEPGR---MCVAEMHHIDKAGGA 333 Query: 305 GMD 307 G D Sbjct: 334 GRD 336 >UniRef50_A9IQC4 Ubiquinol oxidase polypeptide II n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IQC4_BORPD Length = 345 Score = 336 bits (862), Expect = 7e-91, Method: Composition-based stats. Identities = 152/284 (53%), Positives = 206/284 (72%), Gaps = 6/284 (2%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 + ++LG +LL GC +L PKG IG ++++LILTA GLML++V+P I+M + F Sbjct: 52 FGRTLG----IGALMLLGGCTMEVLSPKGDIGAQEKTLILTALGLMLLIVVPVIIMTLYF 107 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 AWKYRASN A Y P WSHS ++E VVWT+P +I+ LAVLTW+++H L+P +P+ K Sbjct: 108 AWKYRASNTQAVYMPRWSHSTRIEVVVWTIPCIIVGILAVLTWRSSHELDPYRPIESAVK 167 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 P+ I+VVSMDWKW FIYP+ GIATVNEIAFP + PV F++TS SVMNSFFIP+LGSQIY+ Sbjct: 168 PVNIDVVSMDWKWLFIYPDYGIATVNEIAFPVDAPVQFRITSASVMNSFFIPQLGSQIYS 227 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 MAGM+T+LHLIA EPGTY GISA+YSG GFSGM+F AIAT + F+ W+ +AK + N + Sbjct: 228 MAGMETKLHLIAREPGTYAGISANYSGGGFSGMRFNAIAT-SQQGFEDWINQAKAANNPL 286 Query: 246 SDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 + AA++ LAAPS +S+ +F +++ M+ +D Sbjct: 287 T-PAAYQALAAPSINVAATRYSSTPTGMFDYIMHNQMSKIAGLD 329 >UniRef50_P57544 Ubiquinol oxidase subunit 2 n=4 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=CYOA_BUCAI Length = 296 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 139/295 (47%), Positives = 191/295 (64%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 + LSL L+GCN+ LL+ G I E+ SLIL +F +ML ++IP I M + F+ KY Sbjct: 1 MKTLSLILIFFFLNGCNNPLLNSHGTIATEEYSLILISFIMMLFIIIPVIFMTIYFSLKY 60 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R++N + Y PNW S K+E VVWT+PI+I+ FLA L+W TH L+P K + PI I Sbjct: 61 RSTNVNQIYKPNWCDSKKIEIVVWTIPIIIVSFLAFLSWSYTHKLDPKKSIVSLNNPIKI 120 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 + V++DWKW FIYP+ IAT+NEI FP N P+ F++TSNSVMN+FFIP LGSQIYAM GM Sbjct: 121 DAVALDWKWLFIYPDYNIATINEIMFPVNRPIVFRITSNSVMNAFFIPSLGSQIYAMPGM 180 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 T+L+LIAN+ G Y GIS++YSG GFS MKF AI+ + F WV K + S ++ M Sbjct: 181 TTKLNLIANDVGKYKGISSNYSGHGFSNMKFTAISVLKNSTFLDWVKKVQASSIKLNTMK 240 Query: 250 AFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGME 304 F+ ++ P+E +EYFS+VK +LF + N++ +D + ME Sbjct: 241 TFDIISIPNENYSIEYFSSVKKNLFNKIKNQYSIKHFILDENLSHEIVKKNFNME 295 >UniRef50_Q8K993 Ubiquinol oxidase subunit 2 n=6 Tax=Gammaproteobacteria RepID=CYOA_BUCAP Length = 290 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 142/285 (49%), Positives = 195/285 (68%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 +N L L L GC+S L +P G I +++ S++L +F +ML V+IP I M + F Sbjct: 6 FNNFFKTLLLILIAFTLHGCDSILFNPHGIIAIQECSILLISFLIMLFVIIPVIFMTIYF 65 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 + KYRASN +AKY P+W S K+E +VWT+PI II+FLA +TW +H L+P K + K Sbjct: 66 SVKYRASNINAKYKPDWCDSKKIEIIVWTIPISIILFLAFVTWNYSHILDPKKSIISKYK 125 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 PI I+VVS+DW+W FIYPE IAT+NEI FP N + F +TSNSVMNSFFIP LGSQIYA Sbjct: 126 PIKIDVVSLDWRWLFIYPEYHIATINEIMFPINRSIIFHITSNSVMNSFFIPSLGSQIYA 185 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 M GM T L+L++N PG Y GIS++YSG GFS MKF AI+ + F+ W+ KA+QSP + Sbjct: 186 MPGMMTTLNLMSNSPGKYKGISSNYSGKGFSNMKFTAISVLNIKDFENWIKKAQQSPKKL 245 Query: 246 SDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDM 290 + M+ F ++ P+E + +EYFS+VK +LF ++IN+ + K Sbjct: 246 NKMSIFNIISLPNENHFIEYFSDVKKNLFYEIINQTYSKNKVFKH 290 >UniRef50_Q0KB46 Bo3-type quinol oxidase, subunit II n=2 Tax=Burkholderiaceae RepID=Q0KB46_RALEH Length = 330 Score = 333 bits (853), Expect = 7e-90, Method: Composition-based stats. Identities = 135/276 (48%), Positives = 192/276 (69%), Gaps = 3/276 (1%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 GCN LL+PKG IG +++SLIL + +ML+VVIP I++ + FAW+YR +N A Y+P W+ Sbjct: 43 GCNLELLNPKGSIGEQEKSLILISLFVMLMVVIPVIVLTLWFAWRYRETNTSATYAPKWA 102 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 HS ++E VVW +P +I+ LAVL W +TH L+P +PL KP+ ++V++++WKW FIYP Sbjct: 103 HSTRIEVVVWGIPCVIVACLAVLIWDSTHKLDPYRPLESQVKPVQVDVIALNWKWLFIYP 162 Query: 144 EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 E G+A++N++A P TPV F++T+ S+MNSFFIP+LGS +YAMAGMQTRLHLIA+ PG Y Sbjct: 163 EYGVASLNQLAIPVGTPVNFRLTAESMMNSFFIPQLGSMVYAMAGMQTRLHLIADTPGVY 222 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQV 263 G SA+YSGPGFS M FK +AT R FD W+ A+ S + D+ + L PS + V Sbjct: 223 LGQSAAYSGPGFSDMHFKTLAT-SRKEFDAWIQAARASSQAL-DLKTYRTLELPSSKDPV 280 Query: 264 EYFSNVKPDLFADVINKFM-AHGKSMDMTQPEGEHS 298 ++ V P LF V++K+M +G+ PE + Sbjct: 281 TLYAAVAPKLFDQVVDKYMLENGQICRADTPESLQA 316 >UniRef50_C5SNE1 Ubiquinol oxidase, subunit II n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SNE1_9CAUL Length = 341 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 148/284 (52%), Positives = 189/284 (66%), Gaps = 7/284 (2%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 K L + V LSGC+ AL+DPKG +GL Q+ LI+ A LMLI V+P I+M + FA Sbjct: 13 RKGLIAGLMVTAAVSLSGCDWALMDPKGPVGLAQKDLIILATLLMLIPVVPVIVMTLWFA 72 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK- 125 W+YRASN A Y PN+ HSN++EAVVW +P LIII L +TW +TH L+P K + Sbjct: 73 WRYRASNTKATYDPNFEHSNRIEAVVWAIPTLIIIALGTVTWISTHELDPHKKVEAAADK 132 Query: 126 ----PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGS 181 PI ++VV++DWKW FIYP+ GIATVNE+A P PV+F++TS SVMNSFFIP+LG+ Sbjct: 133 VGVTPIEVQVVALDWKWLFIYPQYGIATVNEMAMPVGVPVHFEITSASVMNSFFIPQLGT 192 Query: 182 QIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 QIYAM GMQT L L A+ G YDGISA+YSG GF+ MKFKA A D+ FD WVA AK S Sbjct: 193 QIYAMNGMQTHLSLRADHAGVYDGISANYSGFGFAEMKFKAKAV-DQTGFDAWVASAKAS 251 Query: 242 PNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 T+ D A++ L S Y++ V+P LF ++N G Sbjct: 252 GQTL-DTGAYKTLHQKSTLKAPAYYAAVQPALFTKILNGCADGG 294 >UniRef50_B3QMY7 Ubiquinol oxidase, subunit II n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QMY7_CHLP8 Length = 302 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 145/303 (47%), Positives = 200/303 (66%), Gaps = 7/303 (2%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAI 59 MR SLF + +L+GCN + PKG + ++ LI TAFGLMLIVVIP + Sbjct: 1 MRKNNAYALFKAFSLFFTSFILTGCNKMVVFQPKGPVARDEALLIYTAFGLMLIVVIPVL 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 +MA+GFA +YRASN A Y PNW++S KVE +VW VP++I+ FL+ LTW T L+P KP Sbjct: 61 VMAIGFAIRYRASNDKATYKPNWANSIKVELIVWLVPVIIVAFLSWLTWTGTFRLDPYKP 120 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 +A + KP+ +EVVS+DW W FIYP+ IATVNE+ PA+TP+ F++TS +VM SF++P+L Sbjct: 121 IAAEAKPLRVEVVSLDWNWLFIYPDYNIATVNELVLPAHTPLNFRLTSATVMTSFYVPQL 180 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 GSQ+YAMAGMQT+LHL+A+E GT+DG + +SG G++ M FK I F WV A+ Sbjct: 181 GSQMYAMAGMQTQLHLLADETGTFDGHNREFSGKGYATMHFKTIVK-TPEEFQVWVQNAR 239 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMA----HGKSMDMTQPEG 295 Q+ N +S MA ++ LA P+ + V +S V P LF ++ +F G MTQP G Sbjct: 240 QTANALS-MAEYKALAEPNSNHPVTVYSPVVPGLFDHIVGQFTGWMGADGAMKSMTQPNG 298 Query: 296 EHS 298 + Sbjct: 299 KAH 301 >UniRef50_C9YAW0 Ubiquinol oxidase subunit 2 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAW0_9BURK Length = 373 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 12/312 (3%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSAL-LDPKGQIGLEQRSLILTAFGLMLIVVIPAI 59 M K + L WL+ A L+GC+ A+ L+P G I +Q +++TA LMLI+++P I Sbjct: 26 MFKLKAFRKLSWLAAMAMAAGLTGCSKAVVLNPAGDIAAQQGQMVITATLLMLIIIVPVI 85 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 + + FAWKYR SN +A+Y P W HS +E V+WTVP+LIII L LTW TH L+P +P Sbjct: 86 ALTLFFAWKYRQSNTEAEYDPEWHHSTSLELVIWTVPLLIIIALGALTWIGTHKLDPYRP 145 Query: 120 LA---------HDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSV 170 L D KP+ ++VV+MDWKW F YPEQGIATVNE+A P + P+ FK+T+ S Sbjct: 146 LDRIDAQRPLPADAKPMEVQVVAMDWKWLFFYPEQGIATVNELAAPVDRPILFKLTATST 205 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAA 230 MN+F++P L IYAM GMQT L+ + N PG + G+S+ YSG GFSGM FK + Sbjct: 206 MNAFYVPDLAGMIYAMPGMQTELNAVINRPGVFKGMSSHYSGAGFSGMTFKFHGLSNE-D 264 Query: 231 FDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDM 290 F WV KAK T+ D A + L PSE + V+ FS V+ L+ V+N+ + GK Sbjct: 265 FAAWVNKAKTEGKTL-DKATYTNLVKPSERDPVQRFSTVEAGLYDKVLNRCVEDGKMCMH 323 Query: 291 TQPEGEHSAHEG 302 + Sbjct: 324 HMMAIDARGGNA 335 >UniRef50_Q1GEA0 Ubiquinol oxidase subunit II n=2 Tax=Proteobacteria RepID=Q1GEA0_SILST Length = 363 Score = 331 bits (848), Expect = 2e-89, Method: Composition-based stats. Identities = 133/295 (45%), Positives = 184/295 (62%), Gaps = 11/295 (3%) Query: 8 KSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 + L +L + LSGCN LL P G I +Q LI+ + LMLIV+IP + + V FA+ Sbjct: 2 RYLRFLCCALAFLTLSGCNLVLLSPSGDIAAQQGDLIVYSTVLMLIVIIPVMALTVFFAF 61 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS---------K 118 KYRA NKDA+Y P+W HS +E VVW VP+ III LA LTW TH LEP K Sbjct: 62 KYRAENKDARYEPDWDHSVSLEIVVWFVPLAIIICLAGLTWVATHRLEPYDDLRRVSETK 121 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 P+ + +P+ ++VV++DWKW FIYPE G+ATVNE A + PV +K+TS++VMN+F+IP Sbjct: 122 PIDPNVEPMEVQVVALDWKWLFIYPEYGVATVNEAAAIVDRPVEWKLTSSTVMNAFYIPE 181 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 + IYAMAGM+T L+ + NEPGT++G SA+YSG GFS M+F IA D A F+ W+ + Sbjct: 182 MAGMIYAMAGMETELNAVINEPGTFEGFSANYSGNGFSHMRFDFIAE-DEAGFEAWIEEV 240 Query: 239 KQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQP 293 + S T+ D ++ L PS ++VEYF V+ L+ ++N Sbjct: 241 RASGMTL-DQDSYAVLEQPSVAHEVEYFGAVEDGLWDKILNMCAGPNALCLNDMM 294 >UniRef50_B4SM49 Ubiquinol oxidase, subunit II n=4 Tax=Proteobacteria RepID=B4SM49_STRM5 Length = 301 Score = 326 bits (837), Expect = 5e-88, Method: Composition-based stats. Identities = 147/281 (52%), Positives = 202/281 (71%), Gaps = 2/281 (0%) Query: 8 KSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 + + + L+GC+ LLD KG +G+ QR LIL GLMLIVV+PAI++ FAW Sbjct: 6 NRIRLALVALACIALTGCDWVLLDSKGMVGIAQRDLILICIGLMLIVVVPAIVLTFVFAW 65 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 +YRA N AKY P+WSHS KVE VVW VP++II LAV+ W +TH L+P KPL +P+ Sbjct: 66 RYRAGNTKAKYMPDWSHSTKVEIVVWGVPLIIIAVLAVIVWTSTHELDPYKPLDVAGEPL 125 Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 ++V++ DWKW F+YP+ GIATVN++ FPAN + F +TSNS MN+FFIP+LG QIYAMA Sbjct: 126 HVDVIATDWKWVFVYPDLGIATVNQLNFPANRALAFNITSNSTMNTFFIPQLGGQIYAMA 185 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD 247 GM+T+LHLIANEPG + G+S +YSG GFS MKF A A+ + F++WVA+ + +P+ +S Sbjct: 186 GMRTQLHLIANEPGQFRGMSGNYSGHGFSNMKFIATASSNE-DFERWVAEVRSAPDALS- 243 Query: 248 MAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM 288 A F+ LAAPS V++FS+V+P LF VI++F+ G++ Sbjct: 244 FAEFKALAAPSRNAPVQHFSSVEPLLFKKVIDQFIGVGENT 284 >UniRef50_Q0BNW9 Cytochrome o ubiquinol oxidase subunit II n=16 Tax=Francisella RepID=Q0BNW9_FRATO Length = 300 Score = 326 bits (837), Expect = 5e-88, Method: Composition-based stats. Identities = 139/306 (45%), Positives = 185/306 (60%), Gaps = 11/306 (3%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 + K L LS G + LSGC + +P G I +++ L++ A LML VV+P I++ + F Sbjct: 3 WKKYLLILSSVVGVLSLSGCKGGIWNPMGVITAQEKQLLIFAIVLMLFVVVPVIILILCF 62 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 AWKYR +A+Y P WSHSNK+E + W VP +II+ LA++TWKTTH+L P KPL D+K Sbjct: 63 AWKYR-DGANAEYRPTWSHSNKLEIICWGVPFIIILILAIVTWKTTHSLSPYKPLESDKK 121 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 P+ I+VV+++WKW FIYPE IATVN I P + P+ FK+TS + MNSFFIP L QIYA Sbjct: 122 PVEIDVVALNWKWMFIYPEYDIATVNYIEIPKDRPINFKITSAAPMNSFFIPELAGQIYA 181 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 M GM T+LHLIA G Y G SA+Y+G GF+ M+F A T D+A FD+WV K + Sbjct: 182 MTGMTTQLHLIATHEGKYRGFSANYTGIGFAEMEFFAKVT-DQADFDKWVKDVKNGKHQS 240 Query: 246 SDMAAF-EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGME 304 F L S N V Y+S+V +LF D++ +M M Sbjct: 241 LTWDYFWSDLFKDSIDNPVAYYSHVDKNLFNDIVMSYMMPNYKPGDMA--------SNMS 292 Query: 305 GMDMSH 310 GM M H Sbjct: 293 GMHMHH 298 >UniRef50_Q6F9R5 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F9R5_ACIAD Length = 353 Score = 321 bits (824), Expect = 1e-86, Method: Composition-based stats. Identities = 147/328 (44%), Positives = 198/328 (60%), Gaps = 46/328 (14%) Query: 10 LGWLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 L LSL LL+GC LL+ KG +G Q +L++TA LML+VVIP+++MA+ F+W Sbjct: 6 LAVLSLSTIAALLTGCGGDMVLLNSKGPVGQGQSNLMMTAIYLMLLVVIPSVIMALWFSW 65 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 KYRASNKDA Y P W+HS +E VVW VP++II LA LTW +H +P +PL D+ P+ Sbjct: 66 KYRASNKDADYKPTWAHSTAIEIVVWGVPVIIIGILAWLTWWGSHKYDPYRPLESDKAPL 125 Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 TI+V++ +KW F+YPEQ IATVNE+ FP TP+ FK+TSN MNSFFIP+LG QIYAMA Sbjct: 126 TIQVIAEQFKWIFVYPEQNIATVNEVRFPEKTPLSFKITSNFTMNSFFIPQLGGQIYAMA 185 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD 247 GMQT LHL+A++PG + G+S++YSG GFS M FKA + + A F QWV K T + Sbjct: 186 GMQTHLHLMADQPGVFRGMSSNYSGYGFSQMHFKAYSVTE-AEFTQWVDAVKAGKGTGVN 244 Query: 248 MAA------------------------------------FEKLAA-------PSEYNQVE 264 A E LA P++ + V Sbjct: 245 PEAIQKGILDQAELATLKDGDRSKHQIEALVHRAQAAGDAEALAKAEAMKPFPNKPHPVT 304 Query: 265 YFSNVKPDLFADVINKFMAHGKSMDMTQ 292 Y+S+V+P LF VIN++M++ D + Sbjct: 305 YYSSVEPKLFETVINRYMSNYHGADHSA 332 >UniRef50_Q5FPP7 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Gluconobacter oxydans RepID=Q5FPP7_GLUOX Length = 312 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 137/312 (43%), Positives = 196/312 (62%), Gaps = 15/312 (4%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 ++K + L L ++LSGC LL P+G + R +++ F +M++VV+P Sbjct: 7 MKKLWRYLPALP----ALMLSGCTVDLLQPRGPVAEMNRDVMVAEFVIMMLVVVPTCAAT 62 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL-- 120 + FAWKYRASNK+A+Y P W HS +E V+W VP ++I L ++W +THA +P +PL Sbjct: 63 LYFAWKYRASNKEAEYLPTWDHSTAIEYVIWGVPAILIALLGAISWWSTHAYDPYRPLQT 122 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 A + KP+ ++VVS+DWKW FIYP+ GIAT+N++ P NTP+ F++TS+SVM SFFIPRLG Sbjct: 123 ADNVKPLNVQVVSLDWKWMFIYPDLGIATINQLDVPTNTPLNFQITSDSVMTSFFIPRLG 182 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 S IYAM G QT+LHL+A+E G Y G ++ +SG GFS MKF+ +A D A F+ WV K K Sbjct: 183 SMIYAMPGEQTQLHLLASESGDYLGEASQFSGRGFSDMKFRTLAM-DPAQFNDWVEKVKS 241 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMA-------HGKSMDMTQP 293 + D + K AAP E V+YF++V+PDLF ++ K+ GK M M Sbjct: 242 GSENLDD-TTYPKYAAPQEAAPVQYFAHVQPDLFDGIVAKYNNGMMVDKKTGKVMHMQSA 300 Query: 294 EGEHSAHEGMEG 305 + GM+ Sbjct: 301 SNAAPSDTGMKE 312 >UniRef50_Q2C3Z7 Cytochrome O ubiquinol oxidase subunit II n=3 Tax=Vibrionaceae RepID=Q2C3Z7_9GAMM Length = 295 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 146/283 (51%), Positives = 191/283 (67%), Gaps = 5/283 (1%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 L LS+ T + + N L D KG IG Q SLI+T+ LM I+++P +LM+V F +KY Sbjct: 14 LATLSVALLTFIFTSSNMVLFDSKGSIGQAQSSLIITSVLLMAIIIVPVLLMSVYFPYKY 73 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R SNKDA+Y PNW HS K+E +VW VP LII+ L +T++T+++L+P K +A +EKP+TI Sbjct: 74 RHSNKDAEYKPNWEHSTKIEVIVWAVPCLIILALGWITYQTSYSLDPRKEIASEEKPLTI 133 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 +VV+M+WKW FIYPEQ IATVNEIA P N PV F VTS++ MNSFFIP+LGSQ+YAMAGM Sbjct: 134 QVVAMNWKWLFIYPEQQIATVNEIALPVNRPVRFLVTSDTTMNSFFIPQLGSQVYAMAGM 193 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD-- 247 + RLHL+A E G Y GISA+YSG GF+ MKFKA A D A F+QWV K K S ++D Sbjct: 194 ENRLHLMAEEKGVYRGISANYSGFGFTNMKFKAHAV-DNADFEQWVQKVKASDKVLNDSS 252 Query: 248 --MAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM 288 + + V YF++V P F D+I K + Sbjct: 253 YAVLTANAKEQIKTAHPVTYFASVDPLRFKDIIEKHAGVQNGL 295 >UniRef50_B0VM15 Cytochrome o ubiquinol oxidase subunit II n=14 Tax=Acinetobacter RepID=B0VM15_ACIBS Length = 350 Score = 319 bits (819), Expect = 6e-86, Method: Composition-based stats. Identities = 142/326 (43%), Positives = 190/326 (58%), Gaps = 46/326 (14%) Query: 24 GCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 GC LL+ KG +G Q L++TA LML+VVIP+I+MA+ F WKYRASNKDA Y P Sbjct: 20 GCGGDMVLLNSKGPVGQGQSDLMMTAIYLMLLVVIPSIIMALWFGWKYRASNKDADYKPT 79 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI 141 W+HS +E VVW +P++II LA LTW +H +P +PL D+ P+TI+V++ +KW FI Sbjct: 80 WAHSTAIEVVVWGIPVIIIGILAWLTWWGSHKYDPYRPLESDKAPLTIQVIAEQFKWIFI 139 Query: 142 YPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 YPEQ IATVNE+ FP TP+ FK+TSN MNSFFIP+LG QIYAMAGMQT LHL+ANE G Sbjct: 140 YPEQNIATVNEVRFPEKTPLSFKITSNFTMNSFFIPQLGGQIYAMAGMQTHLHLLANETG 199 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA----- 256 Y G S++YSG GFS M+FKA + ++ F++WVA K T + A +K Sbjct: 200 VYRGFSSNYSGYGFSQMRFKAHSVTEQ-QFNEWVAAVKAGNGTTINPEAVQKTTLDQAEL 258 Query: 257 --------------------------------------PSEYNQVEYFSNVKPDLFADVI 278 P++ + V Y+S+V+P LF +I Sbjct: 259 ATLRDGDRSKHQIEHLVNRAKAAGDQEALAKAEAMKPFPTKPHPVTYYSSVEPKLFETII 318 Query: 279 NKFMAHGKSMDMTQPEGEHSAHEGME 304 N +M++ D + H E Sbjct: 319 NHYMSNYHGADHSAAHTTAETHVAAE 344 >UniRef50_C6XEZ5 Ubiquinol oxidase, subunit II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XEZ5_LIBAP Length = 332 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 127/299 (42%), Positives = 184/299 (61%), Gaps = 11/299 (3%) Query: 20 VLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 V+LSG ++DP G I L+Q SLI A LML++V+P + FAWKYR++NK A+Y Sbjct: 26 VMLSGFEFIVMDPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYD 85 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL---------AHDEKPITIE 130 P W HS +E VW VP++I+ FLAV+TW TH ++P PL A + KP+ +E Sbjct: 86 PKWCHSTLLELFVWLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVE 145 Query: 131 VVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 VV++DWKW F+ PEQ +A +NE+ P + P+ F++T++SVMNSF+IP L QIYAMAGM+ Sbjct: 146 VVALDWKWLFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGME 205 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 T+LH + N+ G Y G SA+YSG GFS M+FK ++ F+ W++K K+ T + Sbjct: 206 TKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKSEK-GFEDWISKVKRQ-GTFLNRQE 263 Query: 251 FEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMS 309 + L PSE + V YFS ++ L+ ++N + GK + GM G+D Sbjct: 264 YLLLKKPSERDSVRYFSPIEKGLYYSILNLCVHPGKICMDEMMRIDALGGGGMRGIDRH 322 >UniRef50_Q0FH64 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FH64_9RHOB Length = 377 Score = 316 bits (810), Expect = 6e-85, Method: Composition-based stats. Identities = 126/278 (45%), Positives = 173/278 (62%), Gaps = 5/278 (1%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD-AKYSPN 81 SGC +L P G +G +QR L++ + LMLIV++P + M+V F KYRA +D + Y P Sbjct: 18 SGCQYDVLSPAGWVGDQQRDLLIISVLLMLIVILPVLFMSVYFPLKYRADREDTSDYDPE 77 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK--PITIEVVSMDWKWF 139 + HSNK+EAVVW VPILII+ L T+ TH L+P +PL H E P+ I+ VS+DWKW Sbjct: 78 FEHSNKLEAVVWGVPILIIVALGYYTYVYTHRLDPYRPLDHLEAGAPVEIQAVSLDWKWL 137 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 FIYPEQGIA+VNE+ PA P+ F ++S++VMN+ IP LG +Y+MAGM+T+LHLIA+E Sbjct: 138 FIYPEQGIASVNELVVPAGRPINFSLSSSTVMNTLSIPALGGMVYSMAGMETKLHLIADE 197 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 G Y G SA YSGPGF+GM F AT D FD WV + + + + L PS Sbjct: 198 EGVYPGRSAHYSGPGFAGMVFDTTATSDE-EFDAWVEGIRAEAGPL-NRETYLALEEPSM 255 Query: 260 YNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEH 297 V ++ +V+ LF ++ + GK +H Sbjct: 256 NVPVSHYGSVEDGLFGRIVEMCVEDGKVCMGHMMMVDH 293 >UniRef50_C4XNK3 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNK3_DESMR Length = 319 Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats. Identities = 143/282 (50%), Positives = 188/282 (66%), Gaps = 4/282 (1%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCN-SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAI 59 M+ + L L LSGC+ ALLDPKG IG +R LI AFGLMLIVVIP I Sbjct: 1 MKRNTASAFAAVLGL-CALAALSGCSELALLDPKGPIGEAERRLIFIAFGLMLIVVIPVI 59 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 +MAV F KYR SN +A+Y+P WSHS K+E V+W +P++I+I L+ L W TH L+P KP Sbjct: 60 VMAVWFPHKYRESNTEAEYAPKWSHSGKIELVMWLIPMVIVILLSTLLWIETHRLDPYKP 119 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 LA +K + +EVVS+DWKW FIYP QG+A VNE+ FPA P+ F +TS++VM SFFIPRL Sbjct: 120 LAAPDKQLPVEVVSLDWKWLFIYPRQGVAVVNELVFPAGMPLAFDITSDTVMTSFFIPRL 179 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 GSQIYAM GM+T+LHL+A+ G Y G + +SG G+ M F A A +A FD W+ K K Sbjct: 180 GSQIYAMGGMRTKLHLLADTEGEYVGQNQQFSGAGYPDMFFPARAV-SQAGFDAWLQKVK 238 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 SP T+ +M F++L P YFS ++P +F ++ K+ Sbjct: 239 ASPETL-NMTRFDELRKPGVAAAPVYFSKIEPGIFEAILGKY 279 >UniRef50_D0ST29 Ubiquinol oxidase, subunit II n=2 Tax=Acinetobacter RepID=D0ST29_ACILW Length = 364 Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats. Identities = 141/336 (41%), Positives = 195/336 (58%), Gaps = 46/336 (13%) Query: 10 LGWLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 L LSL A T LL+GC LL+ KG + Q +L++TA LML+VVIP+I+MA+ F W Sbjct: 6 LAVLSLSAMTALLTGCGGDMVLLNSKGPVAAGQSNLMMTAIYLMLLVVIPSIIMALWFGW 65 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 KYRASNKDA Y P W+HS +E VVW +P++II LA LTW +H +P +P+ D+ P+ Sbjct: 66 KYRASNKDADYKPTWAHSTAIEIVVWGIPVIIIGILAWLTWWGSHKYDPYRPIEADKAPL 125 Query: 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 T++V++ +KW FIYPEQGIATVNE+ FP TPV ++TSN MNSFFIP L QIYAMA Sbjct: 126 TVQVIAEQFKWIFIYPEQGIATVNELRFPEQTPVSLRLTSNFTMNSFFIPALSGQIYAMA 185 Query: 188 GMQTRLHLIANEPGT---YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPN- 243 GMQT L+ +A+E Y G S++YSG GFS M+F+A + D A F +W++ + Sbjct: 186 GMQTHLNFLADETSPAEGYRGFSSNYSGYGFSQMRFRAHSVTD-AQFAEWISAVQAGNGT 244 Query: 244 ---------TMSDMAAFEKLA------------------------------APSEYNQVE 264 T+ D A F L P++ + V Sbjct: 245 SVNPNAVQKTVLDQAEFATLRDGNRGKHQIEAIIAKAETPEEKAAAEAMKPYPTKPHPVT 304 Query: 265 YFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 Y+S+V+ LF VI+K+M++ D + P + Sbjct: 305 YYSSVEQGLFESVIHKYMSNYHGADHSAPVEAAATD 340 >UniRef50_A4G8I7 Ubiquinol oxidase subunit 2 (Ubiquinol oxidase polypeptide II) (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit 2) n=7 Tax=Proteobacteria RepID=A4G8I7_HERAR Length = 355 Score = 313 bits (802), Expect = 6e-84, Method: Composition-based stats. Identities = 126/283 (44%), Positives = 179/283 (63%), Gaps = 11/283 (3%) Query: 25 CNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 C+ LL+P G I +Q LI+ + LML+V++P I++ + FAW+YR +N AKY P+W H Sbjct: 26 CDWVLLNPSGDIAAQQGQLIIVSVLLMLLVIVPVIILTLIFAWRYRKNNTSAKYEPDWDH 85 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA---------HDEKPITIEVVSMD 135 S K+E ++W P+LIII L ++TW +TH L+P +PL +P+TIEVV++D Sbjct: 86 STKLELIIWGGPLLIIIVLGLITWVSTHKLDPYRPLDRLDANRPISAAAEPLTIEVVALD 145 Query: 136 WKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 WKW FIYPEQGIATVNE+A P + PV FK+TS++VMNSF+IP L QIY MAGM+T+L+ Sbjct: 146 WKWLFIYPEQGIATVNELATPVDVPVRFKLTSSTVMNSFYIPELAGQIYTMAGMETQLNA 205 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLA 255 + N+P +G SA+YSG GFS M+FK D F++WV K K + D A+ +L Sbjct: 206 VINKPVESEGFSANYSGAGFSHMRFKYHGM-DVEDFNRWVKKVKAEGGKL-DRTAYLELE 263 Query: 256 APSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHS 298 PSE V Y+ V DL+ ++N+ + G + Sbjct: 264 KPSEREPVTYYKTVSSDLYGAILNRCVEEGSVCMDQMMRDDAH 306 >UniRef50_Q89AA3 Ubiquinol oxidase subunit 2 n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=CYOA_BUCBP Length = 286 Score = 313 bits (802), Expect = 6e-84, Method: Composition-based stats. Identities = 131/278 (47%), Positives = 186/278 (66%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M+ KY + L + ++GC+ +L P G I EQR ++ +F ML+++IP I Sbjct: 1 MQFIKYKSYILKFLLVSCIFCINGCDCTILCPNGLIAQEQRFVLFVSFFTMLLIIIPVIF 60 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 M + F +YR SN Y P WSHSN +E ++W +PI+II+FL++ +WK+ H L+P KP+ Sbjct: 61 MTIFFVLRYRESNFSKTYDPKWSHSNIIELLIWGIPIIIIVFLSIFSWKSVHDLDPKKPI 120 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 + +PI I V+S+DWKW FIYP+Q IAT+N++ P NTP+ F +TS SVMNSFFIP LG Sbjct: 121 VSNVQPIKINVISLDWKWLFIYPDQKIATINKLIIPINTPIIFNLTSGSVMNSFFIPSLG 180 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 SQIY M GM+T L+LIAN+ G + G S++YSG GFS MKF + T D F +WV K ++ Sbjct: 181 SQIYVMPGMKTNLNLIANKLGQFKGFSSNYSGKGFSNMKFDVLVTSDHIFFYEWVKKIQK 240 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVI 278 S ++ M F +LA PS+ N ++YFSN+K +LF VI Sbjct: 241 SKYKLNSMYQFNQLAIPSDNNAIKYFSNLKENLFNVVI 278 >UniRef50_Q2C912 Cytochrome o ubiquinol oxidase, subunit II n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C912_9GAMM Length = 279 Score = 309 bits (793), Expect = 6e-83, Method: Composition-based stats. Identities = 156/277 (56%), Positives = 201/277 (72%) Query: 15 LFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNK 74 + T++L+GC ALLDPKG IG++++ LI+ A LMLIVVIP ILM + FA++YR SN Sbjct: 1 MVLTTLILNGCQFALLDPKGSIGVQEKELIIKALLLMLIVVIPVILMTIYFAYRYRESNT 60 Query: 75 DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 D +Y+P+WSHS K+E VVWT+PI+II LA +TW++TH LEPSKP+A D KPITIEVVS+ Sbjct: 61 DEEYAPDWSHSTKIEVVVWTIPIIIIAILATITWRSTHELEPSKPIASDAKPITIEVVSL 120 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 DWKW FIYPEQ IATVN + FP N PV FK+TS+++MN+FFIP+LGSQIYAM GM T+L+ Sbjct: 121 DWKWLFIYPEQDIATVNYVVFPKNVPVQFKLTSDNIMNAFFIPQLGSQIYAMPGMVTKLN 180 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKL 254 LIAN G + G +SYSG GFS MKF A + +R AF WV + K SPN + D F + Sbjct: 181 LIANHRGDFKGFGSSYSGKGFSEMKFTATSLENRHAFSSWVQQVKMSPNRIEDWEQFRAI 240 Query: 255 AAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 A+PS + E FS+V P LF DV+ + + T Sbjct: 241 ASPSVGDPAESFSSVPPFLFNDVVTQHPGSMNCLPET 277 >UniRef50_B6YZ13 Ubiquinol oxidase, subunit II n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YZ13_9RHOB Length = 282 Score = 309 bits (791), Expect = 9e-83, Method: Composition-based stats. Identities = 124/279 (44%), Positives = 168/279 (60%), Gaps = 3/279 (1%) Query: 25 CNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 S + DPKG I + +R L+ TAF +MLIVVIP M F W+YRA +Y P+W Sbjct: 2 QTSPVADPKGPIAIIERDLLYTAFFIMLIVVIPVYFMVFWFIWRYRAKGGTGEYKPDWHK 61 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 S +E VW++P III L L W ++ L+P K +A E I ++VV+ DWKW FIYP+ Sbjct: 62 STIIEVFVWSIPAAIIITLGYLVWTYSYKLDPYKKIATPENTINVQVVAQDWKWLFIYPD 121 Query: 145 QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYD 204 GIA+VNE+AFP + V K+TS++VMNS IP LG QIYAMAGM + L+L ANE G + Sbjct: 122 LGIASVNELAFPVDKAVSMKLTSDTVMNSLLIPALGGQIYAMAGMTSELNLKANETGRFR 181 Query: 205 GISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVE 264 G + YSG GF+ F A+A + F WVA AK +S +++LA PS + VE Sbjct: 182 GRNTQYSGDGFAMQFFDAVAMTEE-EFQDWVANAKAQSKPLS-TVTYDQLAQPSIAHGVE 239 Query: 265 YFSNVKPDLFADVINKFMAHGK-SMDMTQPEGEHSAHEG 302 YFS VKP LF +++ K+ + ++ P A EG Sbjct: 240 YFSWVKPGLFEEILKKYARRPETTLRRHAPATTQPACEG 278 >UniRef50_C8SDL6 Ubiquinol oxidase, subunit II n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SDL6_9RHIZ Length = 340 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 115/292 (39%), Positives = 177/292 (60%), Gaps = 5/292 (1%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 K + L W+ A GC +LDP+G IG R+++L + +ML++V+P ++ + Sbjct: 29 KPGRQLFWVPAIA---FFPGCAGGVLDPQGPIGSGNRTILLNSLAVMLVIVVPTLVALLA 85 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 FAWK+RASN +A+Y P +++S ++E +VW++P L I FL L + ++ L+P KP+ + Sbjct: 86 FAWKFRASNSNARYDPEFTYSGRIELIVWSIPTLTIFFLGGLIYYGSYQLDPRKPIPSAQ 145 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 P+ I+VV++DWKW F+YPEQG+ VN++ PA PV+FK+TS SVMN+FF+P+LGS +Y Sbjct: 146 PPLDIQVVALDWKWLFLYPEQGVGAVNQLVIPAGVPVHFKLTSASVMNTFFVPQLGSMVY 205 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 M GMQT LHL A+ G++ G SA +SG GFS M F A AF +W + + Sbjct: 206 VMNGMQTELHLQADREGSFYGQSAHFSGDGFSDMNFSVSAV-SADAFARWASSLRGGGGV 264 Query: 245 MSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGE 296 + + A+ +LA S F +V+P LF V + + G + GE Sbjct: 265 L-NANAYRELARQSTNVAPSTFGHVQPGLFDAVAQQTLPPGPGPAESAAGGE 315 >UniRef50_A0NWL4 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWL4_9RHOB Length = 310 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 124/284 (43%), Positives = 177/284 (62%), Gaps = 6/284 (2%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 R+R +S L +L GC + +L PKG I L +R L+ TAFG+M+IV IPA Sbjct: 9 RVRAALRSAATAGLICSVPVLQGCALSDAPVLFPKGPIALAERDLLFTAFGIMMIVAIPA 68 Query: 59 ILMAVGFAWKYRAS-NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 IL+ + FAW+YR A Y+P W S +EAVVW VP I++ + + W TH L+P Sbjct: 69 ILLTLLFAWRYRKRTRNTADYAPEWDGSWGIEAVVWLVPAAIVVVIGTIVWDATHRLDPY 128 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 KPLA D+ ++ V++DWKW F+YPE G A+VNE+AFPA+ P+ ++TS++VMNS IP Sbjct: 129 KPLAADKPAFKVQAVALDWKWLFLYPELGTASVNELAFPADRPLTIEITSDTVMNSLMIP 188 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 LG QIYAMAGM++ ++LIA+ PGT++G + YSG GFS FKA A A F W K Sbjct: 189 ALGGQIYAMAGMRSEMNLIADGPGTFNGRNTMYSGDGFSDQHFKAHAM-SEADFAAWKEK 247 Query: 238 AKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 + + + D A+ L S + V Y+S+ + DLF+ ++ K+ Sbjct: 248 VTGAADVL-DAKAYVDLHKQSVADPVRYYSSFETDLFSIILRKY 290 >UniRef50_Q8L312 Cytochrome bo subunit A n=1 Tax=Vitreoscilla sp. C1 RepID=Q8L312_VITS1 Length = 325 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 136/294 (46%), Positives = 194/294 (65%), Gaps = 22/294 (7%) Query: 13 LSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 LS LL+GC L+D KGQ+G+EQR+LI +ML+VVIPAI M++ FAWKYR Sbjct: 8 LSFITLAALLAGCGEGYVLIDSKGQVGIEQRNLIYIQIVMMLLVVIPAIAMSLWFAWKYR 67 Query: 71 ASNK--DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 +NK + +Y+PNW +S+K+E VW VP +II+ +AV++W+ TH L+P +PL D++ I Sbjct: 68 HNNKAVEKEYAPNWDYSHKIEMWVWAVPCIIILIMAVISWRATHKLDPYRPLDSDKEHIQ 127 Query: 129 IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 I+ ++ ++W F+YP + IATVNEI FP N PV F +TS+ MNSFFIP+LG Q+YAMAG Sbjct: 128 IQAIAAPYQWVFVYPNENIATVNEIYFPDNQPVNFVITSDFSMNSFFIPQLGGQVYAMAG 187 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM 248 M+T+LHLIANE G Y+G SA+YSG GFS MKFKA A A ++ W+ + K S NT++ M Sbjct: 188 MKTQLHLIANEQGVYEGTSANYSGHGFSKMKFKAHAV-SGAEYENWIKQVKASQNTLT-M 245 Query: 249 AAFEKLAAP----------------SEYNQVEYFSNVKPDLFADVINKFMAHGK 286 F+ L P + V+YF V+ +LF ++++++M Sbjct: 246 QKFKSLQEPVRQTTVGVPHVKRTESPKPEPVQYFGTVENNLFQNIVDQYMRSKH 299 >UniRef50_A9KG38 Cytochrome c oxidase polypeptide II n=7 Tax=Legionellales RepID=A9KG38_COXBN Length = 310 Score = 302 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 118/284 (41%), Positives = 170/284 (59%), Gaps = 7/284 (2%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGC----NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 L+ K L ++ + + L+GC +L P+G + E+R L + LMLIVVIP Sbjct: 13 LKNIIKFLLFVGVLVAGLSLAGCHSLRGGGILHPEGTVSFEERQLFFDSLALMLIVVIPV 72 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 +M+ F +YRA +K + Y PNW HS +E + W VP III L ++TW TH L+P + Sbjct: 73 FIMSFTFIVRYRAGHKTSDYKPNWGHSVLLETIWWGVPCGIIIILGIMTWTLTHKLDPYR 132 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSV-MNSFFIP 177 + KP+ I+ V++ WKW FIYPEQ ATVN + P + F +T++ V M++FFIP Sbjct: 133 RIDTPGKPLLIQAVALPWKWLFIYPEQNFATVNYLELPKGRQIEFWLTNDHVPMSAFFIP 192 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 LGSQIY MAGM+TRLHL+A + G Y G+ Y+G GFS M+F+ + W K Sbjct: 193 ELGSQIYTMAGMRTRLHLVALKDGNYWGLDTQYNGDGFSDMRFQVKVV-EPDELQHWFEK 251 Query: 238 AKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 AKQS ++ + ++KL PS + V YFS+V P+LF +I K+ Sbjct: 252 AKQSKEQLT-LQLYQKLIQPSAKDPVRYFSSVAPNLFPQIIMKY 294 >UniRef50_B9R6J2 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R6J2_9RHOB Length = 326 Score = 301 bits (772), Expect = 1e-80, Method: Composition-based stats. Identities = 127/280 (45%), Positives = 180/280 (64%), Gaps = 8/280 (2%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 + + LG + A L+SGC + +L P+G I L QR L+ TAF LM+IV IPAIL+ Sbjct: 31 WVRQLG--AAAAIAFLVSGCALSEAPILYPQGPIALAQRDLLFTAFWLMMIVAIPAILLT 88 Query: 63 VGFAWKYR-ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA 121 + F ++YR + A Y+P W S K+E VVW VP III L L W+ TH L+P K LA Sbjct: 89 LLFVYRYRSRHHSTAAYTPEWEGSWKIETVVWLVPAAIIIVLGTLVWRDTHKLDPYKELA 148 Query: 122 HDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGS 181 D+ P ++ +++DWKW F+YPE G+A+VNE+AFPA+ P+ K+TS++VMNS IP LG Sbjct: 149 SDKPPFEVQAIALDWKWLFVYPELGVASVNELAFPADRPLSIKITSDTVMNSLMIPALGG 208 Query: 182 QIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 QIYAMAGM+T ++L+A+ PGT+ G + YSG GFS F A A + A F W K S Sbjct: 209 QIYAMAGMRTEMNLLADGPGTFKGRNTMYSGDGFSDQNFLAHALTE-ADFTAWKEKVTGS 267 Query: 242 PNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 P+ + D + ++ S N V Y+S+V+P+LF ++ K+ Sbjct: 268 PDAL-DAKTYLEVTKQSVANPVAYYSSVEPNLFGLILRKY 306 >UniRef50_C6CSR8 Quinol oxidase AA3, subunit II n=2 Tax=Paenibacillaceae RepID=C6CSR8_PAESJ Length = 317 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 124/316 (39%), Positives = 185/316 (58%), Gaps = 15/316 (4%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +RKY + L L + V+LSGC+ +LDPKG IG Q+ LI L I+++P ++ Sbjct: 1 MRKYIRFLVPLMIMLIAVMLSGCSDQYVVLDPKGPIGESQKDLIWITVWLCAIILVPVLI 60 Query: 61 MAVGFAWKYR-ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 + W+YR + A Y PNW HS K+E + W +PI+II LA +T K T+ LEPSKP Sbjct: 61 LTAIIVWRYRDKKDNKAGYQPNWEHSTKLETIWWAIPIIIIAILATVTIKYTYDLEPSKP 120 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 L ++PITIE S+DWKW F YP++GI+TVN + P +TP+ F+VT++ MNSF+IP+L Sbjct: 121 LESAKQPITIEATSLDWKWLFTYPDEGISTVNYLQIPEDTPIRFRVTADQAMNSFWIPQL 180 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G QIYAM+GM L+L A+E G + G+ A+++G F+ M F AT D A + WV K Sbjct: 181 GGQIYAMSGMAMTLYLQADEVGDFLGMGANFTGEQFAKMMFNVKATSD-ADYHAWVDSVK 239 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSA 299 Q+ +++ F++L P + + FS LF V+ +++ P G + Sbjct: 240 QTSPALTEEG-FKELKLPGSS-EQQSFSAFPKGLFDQVVMQYVG---------PNGADAP 288 Query: 300 HEGMEGMDMSHAESAH 315 + G + + AE H Sbjct: 289 NSGQKSKPIHDAEGGH 304 >UniRef50_D0D3A4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella sp. SE45 RepID=D0D3A4_9RHOB Length = 413 Score = 300 bits (768), Expect = 5e-80, Method: Composition-based stats. Identities = 123/287 (42%), Positives = 180/287 (62%), Gaps = 5/287 (1%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA-SNKDAKYSPN 81 +GC +L P+G +G +QR L++ + LMLIV++P + M+V F KYRA + Y P Sbjct: 44 TGCQYNVLSPQGWVGEQQRDLLILSTLLMLIVIVPVLFMSVYFPLKYRADRENTSDYDPE 103 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA--HDEKPITIEVVSMDWKWF 139 + HSNK+EAVVW VPILII+ L T TH L+P +PL +PI ++ VS+DWKW Sbjct: 104 FEHSNKLEAVVWGVPILIIVVLGYYTAVYTHRLDPYRPLDYLDAGEPIEVQAVSLDWKWL 163 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 FIYPE G+A+VNE+A PA PV F +TS++VMN+ IP LG +Y+MAGM+T+LHLIA+ Sbjct: 164 FIYPELGVASVNELAIPAGRPVNFSLTSSTVMNTLSIPALGGMVYSMAGMETKLHLIADS 223 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 GTY+G SA YSGPGF+GM F+ ++ + F+ WV + ++ ++ L AP+ Sbjct: 224 EGTYEGRSAHYSGPGFAGMVFETMSM-NEDEFNGWVENLRAEGQPLT-ADSYLALEAPTM 281 Query: 260 YNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGM 306 + V Y+S+V+ LF ++ +A GK + G+ G+ Sbjct: 282 NDPVSYYSSVEDGLFDRIVGLCVAEGKVCMSDMMMSDMHGGGGLAGI 328 >UniRef50_A1UU71 Cytochrome o ubiquinol oxidase, subunit II n=5 Tax=Bartonella RepID=A1UU71_BARBK Length = 323 Score = 296 bits (759), Expect = 5e-79, Method: Composition-based stats. Identities = 116/308 (37%), Positives = 177/308 (57%), Gaps = 13/308 (4%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 +R + K + L++ +LLSGC +L P G + +Q LI +ML VVIP ++ Sbjct: 1 MRSFVKQIEMLTILGVGLLLSGCKIDVLQPAGYVARQQLILIAICVFVMLCVVIPVMVAV 60 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL-- 120 + A KYRASN A Y P+W HSNKVEA +W VPI II+ L LT T+ LEPS PL Sbjct: 61 IVLAIKYRASNTKADYLPDWGHSNKVEAFMWGVPIAIIVILGALTAYYTYRLEPSNPLPV 120 Query: 121 --AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 A +EK + + V++DWKW FIYPE GIA++NEI P + V ++TS S +N+F++P+ Sbjct: 121 EVAGEEKLLQVNAVALDWKWLFIYPEYGIASINEIYAPKDRQVLLQLTSESSLNAFWVPK 180 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 LG+ +YAM M ++LHL+A+E G ++G SA+YSG GFS M+F + F+ WV K Sbjct: 181 LGTVLYAMPQMNSKLHLVADEKGIFNGNSANYSGDGFSHMRFHWHSV-SLEDFNDWVTKV 239 Query: 239 KQSPNTMSDM--------AAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDM 290 + + + + +AA + +V YF+ V+ L+ ++N+ + + Sbjct: 240 RDNGQKLDRVSYRQLAIAPRMNDIAAKEKDAEVRYFAPVEKRLYYRIVNRCVDENTICNE 299 Query: 291 TQPEGEHS 298 + + Sbjct: 300 DLMKRAAA 307 >UniRef50_Q6MBY6 Probable cytochrome o ubiquinol oxidase chain II cyoA n=2 Tax=Parachlamydiaceae RepID=Q6MBY6_PARUW Length = 295 Score = 293 bits (749), Expect = 8e-78, Method: Composition-based stats. Identities = 115/260 (44%), Positives = 170/260 (65%), Gaps = 2/260 (0%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 A+L P+G + +++R+L+L LML+VVIP ++ F+WKY A N KY P+ + Sbjct: 38 AILFPEGWVAVKERNLLLIIQALMLLVVIPVYILTFVFSWKYSADNPKGKYDPDLVDNKF 97 Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI 147 E + W +P+++IIFL+VLTW T L+P KP+ D+K ITI+V+++ WKW FIYPE+ I Sbjct: 98 AEFIWWGIPLVLIIFLSVLTWVKTAELDPYKPIISDKKEITIQVIALQWKWLFIYPEEKI 157 Query: 148 ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 AT+N + P +TP++F++T+++ MNSF+IP LG QIYAM MQT L+LIAN G Y G S Sbjct: 158 ATINFLQIPQDTPIHFEITADAPMNSFWIPELGGQIYAMPSMQTELYLIANHTGDYRGSS 217 Query: 208 ASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFS 267 A+ SG GFSGM F ++ + + QW+ AKQS N + + + +A PS+ N VE + Sbjct: 218 ANLSGEGFSGMNFITRSSTEE-EYQQWLTSAKQSNNIL-NQNEYNLIAKPSKNNPVEIYR 275 Query: 268 NVKPDLFADVINKFMAHGKS 287 + LF I+K+M K Sbjct: 276 LEENSLFDLTIDKYMYPQKK 295 >UniRef50_C0Z7C6 Quinol oxidase polypeptide II n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7C6_BREBN Length = 331 Score = 290 bits (742), Expect = 4e-77, Method: Composition-based stats. Identities = 117/313 (37%), Positives = 184/313 (58%), Gaps = 15/313 (4%) Query: 12 WLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 W+ GTVLL+GC S +L+PKG + Q +LI+ + L+ ++++P I + ++Y Sbjct: 13 WILAVLGTVLLTGCGSEYLVLNPKGPVAETQYNLIIISTILVAVIIVPVIALTAFIVYRY 72 Query: 70 RASN-KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 R + A Y P W+HS +E + W +PI+I+ L T + + L+ + + P+T Sbjct: 73 RDTPGNKASYKPEWAHSTTLEVIWWIIPIVIVALLGYFTVRDVYVLK--ENPNKEVAPMT 130 Query: 129 IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 I+V ++DWKW F YPEQ IATVN + PA P+ F+V++++ MNSF++P LG QIYAMAG Sbjct: 131 IQVTALDWKWMFTYPEQNIATVNHLEIPAGVPIRFQVSADAPMNSFWVPELGGQIYAMAG 190 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM 248 M T L+L A+EPGT+ G S+++SG GF+ M+F +A P + FD+WV + K + M+ Sbjct: 191 MATELYLQADEPGTFAGFSSNFSGEGFAKMQFDVVAKP-KDEFDKWVKEVKGTTPAMTK- 248 Query: 249 AAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ-----PEGEHSAHEGM 303 A +E+L P ++ Y S +F +++ K+ HG MD P G+ S+ E Sbjct: 249 ADYEELRKPGVTDKFTY-SAFPEGMFEEIVAKY-GHGHDMDYVMEKNPAPAGDKSSSETS 306 Query: 304 EGM-DMSHAESAH 315 M M H +H Sbjct: 307 LNMQHMQHKTESH 319 >UniRef50_B9NVN8 CytOchrome o ubiquinol oxidase, subunit II n=2 Tax=Rhodobacteraceae RepID=B9NVN8_9RHOB Length = 352 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 165/305 (54%), Gaps = 17/305 (5%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 +SL L + +G + + LDP+G I Q++ +L A L+LI VIP +++ A Sbjct: 43 IRSLAILLAVLVSAQTAGASDSFLDPQGPIAAVQKTHLLRATALILIAVIPVLILVPVIA 102 Query: 67 WKYRASNK-DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 +YR A Y P+W S +E ++W VP++I+ L+ WK TH L+P +E Sbjct: 103 LRYRRRKGGTAAYRPHWDFSGGLEVLMWGVPVVIVAILSFYLWKATHRLDPYTAPFGEEP 162 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 + ++VV +DWKW FIYP+ GIA+V E+ P V +T+++VM SF IP L QIYA Sbjct: 163 ALRVQVVGLDWKWLFIYPDLGIASVGELGIPVKQQVAMTLTTDTVMQSFMIPALAGQIYA 222 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 M GM T+LH++A+ P T G + Y+G GF+ KF+ +A F+ WV K + + + Sbjct: 223 MPGMTTQLHVVADTPETMQGENTQYNGRGFTKQKFQTLAMQT-DDFNAWVEKVQAN-GIL 280 Query: 246 SDMAAFEKLAAPSEYNQVE-------------YFSNVKPDLFADVINKFMAHGKSMDMTQ 292 D ++ LA S+ ++V+ YF DLF +++++ + GK + + Q Sbjct: 281 LDPVTYQTLAMRSDRDEVQAELGTAQMPEGALYFKLDDGDLFHSILHRYHS-GKPLPLDQ 339 Query: 293 PEGEH 297 G Sbjct: 340 QPGTS 344 >UniRef50_C1PAT6 Quinol oxidase AA3, subunit II n=1 Tax=Bacillus coagulans 36D1 RepID=C1PAT6_BACCO Length = 308 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 109/294 (37%), Positives = 155/294 (52%), Gaps = 18/294 (6%) Query: 24 GCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 GC++ A+LDP+G + EQ LI+ + LM V + + + + KYRAS A Y P Sbjct: 23 GCDTKIAVLDPQGPMAREQYHLIVYSSILMAFVFVVVLGLYLYMVIKYRASRLPADYKPP 82 Query: 82 WSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 H +KV VWT +P+L+II +A+ T K +++E + +EKP+T+ V S +WKW F Sbjct: 83 QIHGHKVLETVWTAIPVLLIIAIAIPTVKANYSVEETPKSMKNEKPLTVYVTSSEWKWIF 142 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPEQGI TVN + PA P+ F++TS+ M SF+IP LG Q Y M M RL L A+ P Sbjct: 143 SYPEQGIETVNYVNIPAGRPINFELTSSGTMASFWIPELGGQKYTMPNMTMRLILAADHP 202 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G Y G +A+++G GF+ M F +A + F+ WV + K M + +EKL Sbjct: 203 GEYTGRNANFNGEGFAKMDFDVLAQTPK-DFNAWVKEVKSRAPQMKK-SDYEKLIKKE-- 258 Query: 261 NQVEYFSNVKPDLFADVINKFMAH--GKSMDMTQPEGE---HSAHEGMEGMDMS 309 V + K+ KS +GE H H M GMDMS Sbjct: 259 ------GLVGRQTYTGTHLKWDKPDEQKSYYEESEKGEKQNHHHHHDMSGMDMS 306 >UniRef50_C8WSR0 Cytochrome c oxidase subunit II n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR0_ALIAD Length = 298 Score = 279 bits (714), Expect = 9e-74, Method: Composition-based stats. Identities = 113/278 (40%), Positives = 169/278 (60%), Gaps = 8/278 (2%) Query: 18 GTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS-NKDA 76 + + G S++L P G + ++ +I + L +IVV+P I++ W+YR + A Sbjct: 10 ILLTVQGGLSSVLKPAGPVAGQELKIIAGSLILTMIVVVPVIVLFGFILWRYRDKQDNPA 69 Query: 77 KYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 +Y P WS S +E W +PI+II L T K T+AL ++P D KP+TI+V S+DW Sbjct: 70 RYDPEWSESKVLEIAWWGIPIVIIGILGAYTAKVTYAL--TRPPVTDVKPMTIDVTSLDW 127 Query: 137 KWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 KW F YP+QG+ATVNE+ P PV F +T++ MNSF+IP LG Q YAM GM RL L Sbjct: 128 KWLFEYPDQGVATVNELVIPVGVPVAFDLTADGPMNSFWIPSLGGQEYAMPGMVMRLWLE 187 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 A+ PG Y G +A+++G F+GM+FK +AT RAAF +WV + KQ + ++ + + +L Sbjct: 188 ASRPGVYYGHAANFTGQQFAGMQFKVVAT-SRAAFSEWVRQLKQVDHPLT-VTLYSQLRQ 245 Query: 257 PSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPE 294 PSE V+ +S+ DLFA+V+ + G+ M + P Sbjct: 246 PSEI-GVQLYSSYPRDLFAEVVWR--EGGQYMVDSMPS 280 >UniRef50_B1YIW4 Cytochrome c oxidase subunit 2 n=2 Tax=Exiguobacterium RepID=B1YIW4_EXIS2 Length = 343 Score = 275 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 76/253 (30%), Positives = 120/253 (47%), Gaps = 10/253 (3%) Query: 1 MRLRKYNKSL-GWLSLFAGTVLLSGCN---SALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 M ++K K L L + +LLSGC + L P+G+ Q +I + +ML V+ Sbjct: 1 MVVKKSGKMLFRLLPIGLMALLLSGCGIPELSALQPRGEGAQMQLEIIKLSLWVMLFVLA 60 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALE 115 ++ + K+R D P N ++WTV PIL+++ LAV T KTT L Sbjct: 61 IVAVIYIYVLMKFRRKAGDNTV-PKQVEGNHTLEIIWTVIPILLLVVLAVPTIKTTVELA 119 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFF 175 +K +E I V + + W F YP++G++T E+ P V +TS V++SF+ Sbjct: 120 DAKEAKKNE---VINVTANLYWWEFEYPDKGVSTGQELVIPVGKRVAVNLTSKDVIHSFW 176 Query: 176 IPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 +P L + G+ + L A E GTY G A GP + M FK IA ++ +D W+ Sbjct: 177 VPALSGKTDTNPGLDNEMWLQAQEAGTYYGKCAELCGPSHALMDFKVIAL-EQDDYDAWL 235 Query: 236 AKAKQSPNTMSDM 248 K + + Sbjct: 236 KDMKSAKEAETKQ 248 >UniRef50_C0Z582 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillales RepID=C0Z582_BREBN Length = 342 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 14/259 (5%) Query: 3 LRKYNKSLGWLSLFAG-TVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++ + + SLFA ++L+GC + L P G + Q L+ + +M+ V I Sbjct: 1 MKGWQQYWRQFSLFALLALVLTGCGKDELSALKPSGPVAAMQFDLMKLSSAIMIGVFIVV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPS 117 + + +YR P N ++WTV P L++I +A+ T T AL Sbjct: 61 MAIFTYVLIRYRKRPGQQG-IPKQVEGNHALEILWTVIPFLLLIIMAIPTVTTGFALHKE 119 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 P E+ + ++V + + W F YP+ G+A+ ++ P V F ++++ V ++F+IP Sbjct: 120 YPK---EEAVQVKVTAHQFWWEFEYPDLGVASAQDLVLPVGKKVQFVLSASDVKHAFWIP 176 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 LG +I G + ++ L A++ G Y G A G + M FK ++A FD WVA Sbjct: 177 ALGGKIDTNPGQENKMWLQADKAGIYYGKCAELCGASHALMDFKV-EVKEQADFDTWVAN 235 Query: 238 AK----QSPNTMSDMAAFE 252 K + P T + A E Sbjct: 236 MKGVQAKEPVTATSPLAAE 254 >UniRef50_A0R9Y2 Quinol oxidase, subunit 2 (Cytochrome c oxidase, subunit II) n=3 Tax=Bacillus cereus group RepID=A0R9Y2_BACAH Length = 337 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 85/248 (34%), Positives = 144/248 (58%), Gaps = 5/248 (2%) Query: 24 GCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 GC+ A+L+P+G + Q LI+ +F LM +++ ++ +YR ++ Y P Sbjct: 70 GCDKKLAVLNPQGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILIRYREKPENMDYEPP 129 Query: 82 WSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 H N + ++WT VP++I+I L++ T K T+A E + KP+ I V S +WKW F Sbjct: 130 EQHGNTLLEIIWTLVPVIIVIALSIPTVKATYASEEVPKESKHIKPVEIYVTSANWKWLF 189 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPE+ I TVN + PA P+ FK+TS MN+F++P LG Y M GM L+L A++P Sbjct: 190 SYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIMDLYLQADKP 249 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G+Y G SA++SG GF+ M+F+ A + +D+WV + +Q+ +++ + ++ P Sbjct: 250 GSYLGRSANFSGEGFTHMEFEVEAK-TKEKYDKWVKEVQQTAPKLTEDK-YNEIVKPGVV 307 Query: 261 NQVEYFSN 268 ++ + S+ Sbjct: 308 GRMTFSSH 315 >UniRef50_Q81HT3 Quinol oxidase subunit 2 n=80 Tax=Bacillaceae RepID=QOX2_BACCR Length = 291 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 85/248 (34%), Positives = 145/248 (58%), Gaps = 5/248 (2%) Query: 24 GCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 GC+ A+L+P+G + Q LI+ +F LM +++ ++ +YR ++ Y P Sbjct: 24 GCDKKLAVLNPQGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILIRYREKPENMDYEPP 83 Query: 82 WSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 H N + ++WT VP++I+I L++ T K T+A E + KP+ I V S +WKW F Sbjct: 84 EQHGNTLLEIIWTLVPVIIVIALSIPTVKATYASEEVPKESKHIKPVEIYVTSANWKWLF 143 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPE+ I TVN + PA P+ FK+TS MN+F++P LG Y M GM L+L A++P Sbjct: 144 SYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIMDLYLQADKP 203 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G+Y G SA++SG GF+ M+F+ A + +D+WV + +++ +++ A + ++ P Sbjct: 204 GSYLGRSANFSGEGFTHMEFEVEAK-TKEKYDKWVKEVQETAPKLTE-AKYNEIVKPGVV 261 Query: 261 NQVEYFSN 268 ++ + S+ Sbjct: 262 GRMTFSSH 269 >UniRef50_Q725F6 Quinol oxidase AA3, subunit II n=17 Tax=Listeria RepID=Q725F6_LISMF Length = 368 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 88/253 (34%), Positives = 138/253 (54%), Gaps = 3/253 (1%) Query: 17 AGTVLLSGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 T L+SGC +L+PKG + Q LI+ + ML++V+ ++ KYR Sbjct: 15 GVTGLISGCGDLTVLNPKGPVAKGQSDLIIYSIIFMLVIVLTIFVLFTIMLVKYRERKDI 74 Query: 76 AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMD 135 + Y P+ S K+E +P+ I+I LA+ T KT +A E + + + PI I S D Sbjct: 75 SNYEPDMHGSKKLEIFWTLIPVAIVIALAIPTVKTIYAGEEAPKVTSHKDPIVIYATSAD 134 Query: 136 WKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 WKW F YP++ I TVN + P + PV FK+TS M SF++P+LG Q YAM+GM L+L Sbjct: 135 WKWIFSYPDESIETVNYVNIPTDRPVLFKLTSADTMTSFWVPQLGGQKYAMSGMTMNLYL 194 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLA 255 A+E GTY G +A+++G GF+ +F +A ++ F +W + K S ++ +++L Sbjct: 195 QADEVGTYKGRNANFNGEGFADQRFDVVAQSEK-DFKKWAKETKASSPVIT-QDIYDRLL 252 Query: 256 APSEYNQVEYFSN 268 P + Y Sbjct: 253 IPGSSKKKTYSGT 265 >UniRef50_D0DDN4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella sp. SE45 RepID=D0DDN4_9RHOB Length = 319 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 102/285 (35%), Positives = 160/285 (56%), Gaps = 15/285 (5%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNW 82 S L P G + QR G +I ++P ++ W+YR N+ A+Y+P+W Sbjct: 22 SSSRDTFLIPGGPVAAAQRVEFFHIIGWTMIAILPVFVLVPLLLWRYRYRNEKARYTPDW 81 Query: 83 SHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY 142 S +E+++W VP++I+ L+V ++TTH L+P+K LA D P+ ++VV +DWKW FIY Sbjct: 82 ERSPILESLMWGVPLIIVAVLSVQLYRTTHELDPTKTLASDNPPLRVQVVGLDWKWLFIY 141 Query: 143 PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 P+ GIATVN++AFP NT V +T+++VM S I L QIYAM GM+TRLH++A PG Sbjct: 142 PDLGIATVNQLAFPENTSVALDLTTDTVMQSLLISSLAGQIYAMPGMRTRLHILAEAPGV 201 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQ 262 ++G + ++G GF KF+AIA + AFD W+ K ++ + +LA S + Sbjct: 202 FEGENTQFNGTGFPAQKFQAIAM-TQEAFDAWIRSVKADGAPLT-AEGYARLAQASTGAE 259 Query: 263 VE-------------YFSNVKPDLFADVINKFMAHGKSMDMTQPE 294 +FS+V+ DLF ++ ++ + QP Sbjct: 260 ARAEMGGAGGPVDAIHFSSVEGDLFGAILRRYTSGAAVPPARQPG 304 >UniRef50_P34957 Quinol oxidase subunit 2 n=10 Tax=Bacillales RepID=QOX2_BACSU Length = 321 Score = 269 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 16/291 (5%) Query: 24 GC-NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAK--YSP 80 GC N+++LDPKG + +Q LIL + G ML +V ++ KYR Y+P Sbjct: 25 GCSNASVLDPKGPVAEQQSDLILLSIGFMLFIVGVVFVLFTIILVKYRDRKGKDNGSYNP 84 Query: 81 NWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 H N VVWTV PILI+I L+V T +T ++LE + D++P+ + S+DWKW Sbjct: 85 E-IHGNTFLEVVWTVIPILIVIALSVPTVQTIYSLEKAPEATKDKEPLVVYATSVDWKWV 143 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 F YPEQ I TVN + P + P+ FK++S M S +IP+LG Q YAMAGM +L A++ Sbjct: 144 FSYPEQDIETVNYLNIPVDRPILFKISSADSMASLWIPQLGGQKYAMAGMLMDQYLQADK 203 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 GTY+G +A+++G F+ +F A ++ F+ WV K + ++ +++L P Sbjct: 204 VGTYEGRNANFTGEHFADQEFDVNAVTEK-DFNSWVKKTQNEAPKLTKEK-YDELMLP-- 259 Query: 260 YNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSH 310 NV F+ K++ HG+ + + ++ + + Sbjct: 260 -------ENVDELTFSSTHLKYVDHGQDAEYAMEARKRLGYQAVSPHSKTD 303 >UniRef50_Q67ML2 Cytochrome c oxidase subunit 2 n=1 Tax=Symbiobacterium thermophilum RepID=Q67ML2_SYMTH Length = 342 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 23/276 (8%) Query: 14 SLFAGTVLLSGCN---SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 ++ +VLL+GC+ LDPKG + Q L+L + + + I + +++R Sbjct: 15 AILLASVLLAGCSTLPQTPLDPKGPVAQMQTGLLLYTLYIAMGIGISVTAALLYVVFRFR 74 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 A P N V ++WTV P+LI++ +A T + A + P E +T+ Sbjct: 75 ARPGLTGV-PVQIRGNHVLEIIWTVIPVLILVSVAFPTVEA--AFSTAVP---PEGAMTV 128 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 W + F YPE GI T NE+ PA P+ ++TSN V++SF++P+L + + G Sbjct: 129 RATGYRWWFAFEYPELGIVTANELRIPAGQPIRLELTSNDVIHSFWVPKLAGKTDMIPGR 188 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK---QSPNTMS 246 + A+EPG Y G A + G + M+F+ A P FD+WV + + Q P+ +S Sbjct: 189 VNIAWIQADEPGVYLGQCAEFCGDSHANMRFQVRAMP-PEQFDEWVRQRQAMAQGPSELS 247 Query: 247 DMAAFEK---------LAAPSEYNQVEYFSNVKPDL 273 +AA + A + + V P+L Sbjct: 248 AVAARGRELFESNVGNCFACHAVDGTKAQGVVGPNL 283 >UniRef50_C6NXQ9 Cytochrome O ubiquinol oxidase subunit II n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NXQ9_9GAMM Length = 323 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 112/308 (36%), Positives = 167/308 (54%), Gaps = 16/308 (5%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILM 61 K +K+ L L ++L GC+ + LL P+G I L G+ML+++IP L+ Sbjct: 6 KRSKTWPRLVLPPILLMLGGCSRSGLFLLKPEGLISHTFYHYFLLDVGIMLLIIIPTTLL 65 Query: 62 AVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP-- 119 A+ W+YR Y P WSHS +EAVVW +P++ + L+ L+ K + + P P Sbjct: 66 ALWAMWRYRKGGN-GSYHPRWSHSYAIEAVVWGIPLVTVGVLSYLSVKAIYDVNPYNPEV 124 Query: 120 -----LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSF 174 A P+ ++V++ DW+W FIYP+Q IA+V+E+ P TPV F++TS SV+N F Sbjct: 125 ITKAQRAAGGDPVEVDVIATDWRWLFIYPQQHIASVDELVVPVGTPVRFRLTSTSVVNDF 184 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 IP+L I M GM+T+ ++A++ GTY G SA YSG G S M F+ A F QW Sbjct: 185 IIPQLVGMIDVMPGMRTKQAMVADKAGTYVGYSADYSGAGLSWMHFQTKAV-SPTQFTQW 243 Query: 235 VAKAKQSPNTMSDMAAFEKLAAP--SEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ 292 VA AK SP ++ A F + A P + + F +V+P LF V+ + M GK Sbjct: 244 VAHAKSSPQRLT-YAGFNRFARPYIAVGGDQQIFGHVQPGLFDHVVMEVM-RGKVWPTPM 301 Query: 293 PEGEHSAH 300 E+ + Sbjct: 302 AMTENMVN 309 >UniRef50_A4YQP6 Cytochrome o ubiquinol oxidase, subunit II n=3 Tax=Bradyrhizobium RepID=A4YQP6_BRASO Length = 277 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 104/276 (37%), Positives = 161/276 (58%), Gaps = 4/276 (1%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 + DPKG I Q+++++ + +ML +++P + + FAW +R+SN A+Y P++++S V Sbjct: 3 IFDPKGPIAAAQQTILIDSVIIMLAIIVPTSIAVLAFAWWFRSSNGKARYRPDFAYSGAV 62 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 E VVW++P L +I L + W +H L+P+KP+ PI I+ VS+DWKW FIYP+Q +A Sbjct: 63 ELVVWSIPTLTVILLGGVAWIGSHQLDPAKPVDGTGLPIRIQAVSLDWKWLFIYPDQRVA 122 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 TVN + P P+ F++TS SVM +FFIP+LG IY M GM TRL+L + G Y G+++ Sbjct: 123 TVNSLTVPIGAPLQFELTSGSVMTAFFIPQLGGMIYTMNGMVTRLNLRGDHVGIYKGLAS 182 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSN 268 +SG GF M F + F WVA A +S + D A++++LAA S + Sbjct: 183 QFSGDGFPDMMFDTNVVA-QPDFTNWVANAAKSDQVL-DEASYKQLAAQSVEKTPRTYRL 240 Query: 269 VKPDLFADVINKFM--AHGKSMDMTQPEGEHSAHEG 302 P+LF + + + A G + Q E A Sbjct: 241 SDPELFGKIAMQHIPPAPGPQLSENQAREESGASHA 276 >UniRef50_B1HVF0 Quinol oxidase subunit 2 n=6 Tax=Bacillaceae RepID=B1HVF0_LYSSC Length = 301 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 22/310 (7%) Query: 12 WLSLFAGTVLLSGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 LLSGC + +PKG + I+ + M +++ ++ KYR Sbjct: 8 MFVALGALALLSGCEPLTVFNPKGPNAETLSNTIILSIITMAFILLVVYVLLAFMLTKYR 67 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 AS A Y P + + + WTV PI+I+ FLAV+T +TT +E D++P+ I Sbjct: 68 ASKTAADYEPPHEEGSHLLEITWTVIPIIIVAFLAVVTVRTTSTVEAQPAGYDDKEPLVI 127 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 S +WKW F YPE+G+ TVN + P + P+ FK+ S + SF+IP+L Q YAM+ M Sbjct: 128 YASSSNWKWHFSYPEEGVETVNYVNIPVDRPIEFKLYSFGPITSFWIPQLAGQKYAMSDM 187 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 T +HL A+E G++ G +++++G GF+ M+F+A + + FD+WVA K +++ Sbjct: 188 LTTIHLAADEVGSFMGRNSNFNGRGFAEMEFEAQSM-TQEDFDKWVADVKAKEKPLTEEK 246 Query: 250 AFEKLAAPSEYNQVEYFSNVKPDLFADVINKF----MAHGKSMDMTQPEGEHSAHEGMEG 305 F++L + F+ +F M HGK+M M + H M Sbjct: 247 -FDELLKAEHVGRQS---------FSSTHLEFSPAPMEHGKNMKMGDMD-----HGDMSE 291 Query: 306 MDMSHAESAH 315 DM++ S H Sbjct: 292 EDMNNEHSGH 301 >UniRef50_Q1NHQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHQ5_9SPHN Length = 258 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 97/252 (38%), Positives = 140/252 (55%), Gaps = 2/252 (0%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 G + EQ L +++ V P +L+ A+ YR NKD Y PNW S +EA++ Sbjct: 4 AGPVAAEQWRLYKIVAVVLIFVAGPVLLLVPLIAYHYRLDNKDDAYRPNWGFSWSLEALI 63 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 W PI I+ L VL W TH L+P + L + P+ ++VV++DWKW FIYP+ GIATVN+ Sbjct: 64 WLPPIAIVAGLGVLLWDATHQLDPYRALPSKQPPLEVQVVALDWKWLFIYPDDGIATVNQ 123 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 +A P PV+ +TS +VM S IP+L QIYAMAGM+T+L+ A+ PG Y G++ ++G Sbjct: 124 LAVPVGRPVHLSLTSGTVMQSLLIPQLAGQIYAMAGMRTQLNFAADRPGVYRGLNTQFNG 183 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPD 272 GF KF +A PDR + W+ + D + L S + +FS V P Sbjct: 184 AGFQHQKFSVVAMPDR-EYRHWLTRRAADGQPFDDNV-LKSLMRKSVAQRPLFFSKVPPG 241 Query: 273 LFADVINKFMAH 284 LF ++ M Sbjct: 242 LFEHLMMANMQK 253 >UniRef50_Q04441 Cytochrome c oxidase subunit 2 n=5 Tax=Bacillus RepID=COX2_BACPF Length = 342 Score = 262 bits (671), Expect = 9e-69, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 8/254 (3%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGC----NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++ + + +L L T+ L+GC N LDPKG ++ + +M +V I Sbjct: 1 MKLWKTASRFLPLSFLTLFLTGCLGEENLTALDPKGPQAQWIYDNMILSIIVMALVSIVV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPS 117 + KYR D + P H N + WTV PI++++ LAV T T Sbjct: 61 FAIFFIILAKYRRKPGDDE-IPKQVHGNTALEITWTVIPIILLVILAVPTITGTFMFADK 119 Query: 118 KP-LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 P + + I+V + W F Y +G ++ P V F++ + V++SF++ Sbjct: 120 DPDPEVGDNTVYIKVTGHQFWWQFDYENEGFTAGQDVYIPVGEKVIFELHAQDVLHSFWV 179 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 P LG +I + G+ + L A+EPG + G A GP + M FK IA +R +D WV Sbjct: 180 PALGGKIDTVPGITNHMWLEADEPGVFKGKCAELCGPSHALMDFKLIAL-ERDEYDAWVE 238 Query: 237 KAKQSPNTMSDMAA 250 ++ A Sbjct: 239 GMSAEVEEPTETLA 252 >UniRef50_B5ENJ7 COX aromatic rich domain protein n=4 Tax=Acidithiobacillus RepID=B5ENJ7_ACIF5 Length = 321 Score = 262 bits (671), Expect = 9e-69, Method: Composition-based stats. Identities = 106/293 (36%), Positives = 163/293 (55%), Gaps = 13/293 (4%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIP 57 ++ R K+ ++ A +LLSGC + DPKG + +L G+M +V Sbjct: 3 VKWRNNLKNGCRHAVLAPILLLSGCAGNPFWIFDPKGLMADTNLFYLLVDVGIMGSIVGL 62 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 L+ + F W+Y+ KY P WSHSN +E VVW +PI+ + FL+ T L P Sbjct: 63 TALLVIWFMWRYQKGKNRGKYDPTWSHSNTIEVVVWGIPIIAVGFLSYFAVTGTFELNPY 122 Query: 118 KP------LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVM 171 P L P+ ++V++ DW+W F+YP+ +A NE+ PA+TPV+F++TS++V Sbjct: 123 NPTVITNHLKPVSDPVEVDVIATDWQWLFVYPQYHMAAANELVLPAHTPVFFRLTSSAVT 182 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF 231 +FFIP+L I M GM+T+ L +N G Y GI++ Y+G G S M FK A F Sbjct: 183 TTFFIPQLVGMIDVMPGMRTKNALESNHVGEYQGIASDYAGAGTSWMTFKTRIVKS-ADF 241 Query: 232 DQWVAKAKQSPNTMSDMAAFEKLAAP--SEYNQVEYFSNVKPDLFADVINKFM 282 +WV K +QSP +M+ A+F A P + +++V YFS+V LF V+++ M Sbjct: 242 REWVRKVQQSPTSMT-YASFNDYADPYINVHHKVAYFSSVPDGLFDHVVDEVM 293 >UniRef50_Q057E8 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057E8_BUCCC Length = 292 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 128/255 (50%), Positives = 164/255 (64%), Gaps = 1/255 (0%) Query: 30 LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVE 89 ++ G I + L+L F +M I+V P +++ + YR SN KY+PNW HS +E Sbjct: 34 VNVSGYISKLEFELMLLVFKIMFIIVFPVLMLVFFIVYYYRHSNTSEKYTPNWKHSYFLE 93 Query: 90 AVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD-EKPITIEVVSMDWKWFFIYPEQGIA 148 + W +PI II FLA L+W TTH+LEPSK L + KPITIEVVS++W+W FIYP IA Sbjct: 94 IICWLIPIFIISFLAFLSWNTTHSLEPSKKLKVNINKPITIEVVSLNWRWLFIYPYYKIA 153 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 T+NEI+FP N PV FK+TSNSVMNSFFIP LGSQIY MAGM+T L+LIA G Y GIS+ Sbjct: 154 TINEISFPKNVPVNFKITSNSVMNSFFIPNLGSQIYTMAGMKTELNLIALSNGIYKGISS 213 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSN 268 +YSG GFS MKFK D F++W+ K K +S F L+ S+ + EYFS Sbjct: 214 NYSGNGFSNMKFKVYVQNDLFHFNKWIKKVKSKKKFLSFKKQFLNLSKNSKKYKNEYFSY 273 Query: 269 VKPDLFADVINKFMA 283 P LF +I F + Sbjct: 274 TDPLLFYKIIKIFNS 288 >UniRef50_Q4L565 Probable quinol oxidase subunit 2 n=63 Tax=Bacillales RepID=QOX2_STAHJ Length = 374 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 96/262 (36%), Positives = 140/262 (53%), Gaps = 8/262 (3%) Query: 8 KSLGWLSLFAGTVLLSGC-NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 K L +F +LLSGC N + + KG + Q+ LI+ + ML++V + M F Sbjct: 3 KFKSLLLMFGTLILLSGCSNVEVFNAKGPVASSQKFLIIYSIIFMLVIVAVVLTMFAIFI 62 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP 126 +KY + H++ +E + + VPI+I+I L++ T KT + E KP E P Sbjct: 63 FKYSYNKNSETG--KMHHNSLIETIWFVVPIIIVIALSIPTVKTLYDYE--KPPESKEDP 118 Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + + VS +KWFF YPEQ + TVN + P N PV FK+ + M SF+IP+LG Q YAM Sbjct: 119 MVVYAVSAGYKWFFAYPEQKVETVNTLTIPKNRPVVFKLQAMDTMTSFWIPQLGGQKYAM 178 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 GM L A+E GT+ G +++++G GFS FK + D++ FD WV AK Sbjct: 179 TGMTMNWTLQADETGTFRGRNSNFNGEGFSRQTFKVHSV-DQSEFDSWVKDAKSKKTLSQ 237 Query: 247 DMAAFEKLAAPSEYNQVEYFSN 268 D F+K PS N+ FS Sbjct: 238 D--EFDKQLLPSTPNKELTFSG 257 >UniRef50_C8WTG4 Cytochrome c oxidase subunit 2 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTG4_ALIAD Length = 279 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 96/278 (34%), Positives = 142/278 (51%), Gaps = 13/278 (4%) Query: 5 KYNKSLGWLSLFAGTVL-LSGCNSA----LLDPKGQIGLEQRSLILTAFGLMLIVVIPAI 59 K + G ++L TVL L+GC+S +L P+G + + LI+ +F LML+VV+ Sbjct: 4 KGRRVGGLIALIGFTVLALTGCDSPTYWPVLSPQGPVARSEYYLIIYSFILMLLVVLAVF 63 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSK 118 ++ KYRA +A Y P N +WTV PIL++I LA+ T T+ L Sbjct: 64 ILFFWVIIKYRARPDNADYVPPEIEGNAKLETLWTVIPILVVIALAIPTVAVTYKLVYPP 123 Query: 119 PLAHD-----EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNS 173 + K ITI+V+S WKW F YP Q I TVN + PA PV F++TS+ MN+ Sbjct: 124 KVEAATAKIVGKSITIDVISEQWKWVFKYPAQNIETVNYVNIPAGVPVDFELTSSGPMNT 183 Query: 174 FFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 F++P LG + M M +L L A+ PG+Y G A YSG GF+ M F A F+ Sbjct: 184 FWVPALGGMEFTMPNMNLKLWLEADHPGSYLGRGAQYSGRGFAHMTFTVNAL-SPTDFEN 242 Query: 234 WVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 WV +Q+ ++ A ++ P ++ + S Sbjct: 243 WVKSVQQTAPKLTKQAE-AQINRPGLIGKLTFSSTTPE 279 >UniRef50_Q5SLI2 Cytochrome c oxidase subunit 2 n=4 Tax=Thermus RepID=Q5SLI2_THET8 Length = 337 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 12/272 (4%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 +S L L+ ++ A+ P G E L + ++ + Sbjct: 2 QRSFAALGLWGLSLAQEAHRVAITHPGGSFNQEVAFLFPWVYFFSFLIFLVVAGSLAYVT 61 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 WK+RA +D + P H N VVWT +P+ I+ L LT K + P Sbjct: 62 WKFRARPEDQE-EPPQIHGNDRLEVVWTLIPLAIVFVLFGLTAKALIQVNRPIP-----G 115 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 + +EV + W F YPE G+ NE+ PA PV ++TS V++SF++P L + A Sbjct: 116 AMKVEVTGYQFWWDFHYPELGLRNSNELVLPAGVPVELEITSKDVIHSFWVPGLAGKRDA 175 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 + G TR+ EPG Y G A G + M F+ + P + FD++V AK SP + Sbjct: 176 IPGQTTRISFEPKEPGLYYGFCAELCGASHARMLFRVVVLP-KEEFDRFVEAAKASPAPV 234 Query: 246 SD---MAAFEK-LAAPSEYNQVEYFSNVKPDL 273 +D F++ AA + + + P+L Sbjct: 235 ADERGQQVFQQNCAACHGVARSMPPAVIGPEL 266 >UniRef50_A7NPW1 Cytochrome c oxidase subunit 2 n=2 Tax=Roseiflexus RepID=A7NPW1_ROSCS Length = 370 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 16/283 (5%) Query: 16 FAGTVLLSGCN---SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 V+ + C DP G L++ + + L V + + V W++R Sbjct: 18 IGLAVVPAACGNTPGNTYDPYGDNARRIYELLIPIWWMALGVFVVVEGLLVYAIWRFRRR 77 Query: 73 NKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 A P+ H N ++WT+ P +I++ +AVLT++T A E + I+ Sbjct: 78 PGSAA-MPSQVHGNTQVEILWTIAPAIIVLVIAVLTFRTQAA-----NAIMPEDALRIKA 131 Query: 132 VSMDWKWFFIYPEQG-----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + W + F YP+ G + T +++ P PV + S V+++F++P+L + Y + Sbjct: 132 IGHQWWFEFQYPDAGADGKPVVTASDMYIPVGRPVTVVLESQDVIHNFWVPKLAGKTYMI 191 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 G L A +PG Y + A + G + M+F+ IA D + F++W+ + K P+ + Sbjct: 192 PGKTNFLTFTAEQPGIYRAVCAEFCGEAHALMRFRVIAV-DESEFNRWIEQKKTPPSAPA 250 Query: 247 DMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 L + Q + K + + A G+ Sbjct: 251 GTLTVNGLTGDATRGQAIFLDARKQCIACHAVEGTNARGQIGP 293 >UniRef50_B9KZ00 Cytochrome c oxidase subunit 2 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZ00_THERP Length = 388 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 120/303 (39%), Gaps = 26/303 (8%) Query: 23 SGCN------SALLDPKGQIGLEQRSLILT-AFGLMLIVVIPAILMAVGFAWKYRASNKD 75 SGC ++ DP G L +T + L++ V + + ++R D Sbjct: 50 SGCGVIGGKIASTSDPAGDQARLIWDLFITPVWWLVIFVFVLVTGWILINIVRFRRQPGD 109 Query: 76 AKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 + P H N+ + WT +P +I+ +AV + + L + + +V+ Sbjct: 110 TRIPPQ-VHGNQRLEIAWTLIPAIILALIAVPSTRLIFELN--RDPGPGSNALRAQVIGH 166 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 W W F YPE GI T ++ PV +TS+ V++SF+ PRL ++ A+ G + Sbjct: 167 QWWWEFRYPEYGIVTAGDLHLVVGRPVVLTITSHDVIHSFWPPRLAGKVDAVPGRAHTMV 226 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK-------QSPNTMSD 247 E G + G A G + M+F+ + + FD WVAK + + Sbjct: 227 FTPEETGVFYGQCAELCGAQHAHMQFRVVVQ-TQEEFDAWVAKLRRPIPEPPAGSLAATG 285 Query: 248 MAAFEKLAAPSEYNQVE-YFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGM 306 F A + +QV + V P INK +A G ++ +A Sbjct: 286 QQLFAGKAGCAGCHQVSPTYDPVTP------INKTLAVGPNLAYIGERHVLAAFTDNTPE 339 Query: 307 DMS 309 ++ Sbjct: 340 ELH 342 >UniRef50_C6IYW1 Cytochrome c oxidase subunit 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYW1_9BACL Length = 352 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 16/281 (5%) Query: 3 LRKYNKSLGWLSLFAG-TVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++ + + LFA +LLS C ++L P+G + Q LI + +M++V++ Sbjct: 2 MKPWKAVKRLVPLFAMLALLLSACGREDLSVLRPQGPVAEGQLGLIKLSITIMIVVMLIV 61 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPS 117 +A KYR P N ++WT +P+++++ LAV T + A Sbjct: 62 FGIAAYVWIKYRRKPGQND-IPKQVEGNHKLEIIWTAIPLVLVLILAVATVQKVFAF--G 118 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 + + D + I+V S + W F YP+ GI T ++ P + ++ + V++SF++P Sbjct: 119 EDYSKDANAVKIKVTSHLFWWEFTYPDYGITTAQDMIIPTGKKIALELKTADVLHSFWVP 178 Query: 178 RLGSQIYA-MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 L + G + L A G Y G A G + M+FK A +FD+WV Sbjct: 179 SLAGKTDTNTDGTINKAWLEATNEGVYLGKCAELCGKSHAFMEFKVKAV-SPESFDRWVE 237 Query: 237 KAKQSPNTMSDMAAFE----KLAAPSEYNQVEYFSNVKPDL 273 K T+ D A E + + V P+L Sbjct: 238 AMKAPVQTIQDPAVAEVFKTQCLSCHAIGDQG--GPVGPNL 276 >UniRef50_D1C449 Cytochrome c oxidase subunit 2 n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C449_SPHTD Length = 345 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 21/285 (7%) Query: 3 LRKYNKSLGWLSL-FAGTVLLSGCNS----ALLDPKGQIGLEQRSLILTAFGLMLIVVIP 57 LR+ + + +L A V +SGC + DP + L + F + ++V + Sbjct: 4 LRRTARWALFAALTVALVVFVSGCAGGTPQSASDPAADNARKIWDLFMPIFWMSVVVFVI 63 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLA-VLTWKTTHALEP 116 + + ++R D P+ H N + WT+ +I+ V T T L Sbjct: 64 VQGIIIVALIRFRRRPND--PIPHAMHGNTKLEIAWTLAPALILAAIAVPTITTIADL-- 119 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 ++ +T+ + W W F YPE G+ T +E+ P P+ ++ S +++SF++ Sbjct: 120 --ARDPGDEALTVRAIGQQWWWAFEYPESGVVTADELHVPVGRPIRVELESKDIIHSFWV 177 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 PRL + + G +H A+ G Y G A + G + MKFK I + F+ W+ Sbjct: 178 PRLAGKQDVVPGRTNTIHFTADAVGEYSGQCAEFCGAQHANMKFKVIVQTEE-EFEAWLE 236 Query: 237 KAKQ---SPNTMSDMAAFEKL-----AAPSEYNQVEYFSNVKPDL 273 + Q P S A ++L E V PDL Sbjct: 237 QQLQPAVEPEPGSVEAQGKELFMANCLGCHTIQGTEAQGKVGPDL 281 >UniRef50_Q8ER77 Cytochrome c oxidase subunit 2 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ER77_OCEIH Length = 350 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 9/243 (3%) Query: 3 LRKY-NKSLGWLSLFAGTVLLSGC---NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++ + KS + + A +L++GC N LDPKG LIL +M+ V I Sbjct: 1 MKGWMGKSKVFFLISAMALLMAGCGRENLTALDPKGYGADRAMDLILLTTFIMIGVFIIV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPS 117 + + V ++R Y P N V+WTV PI++++ +AV T T L Sbjct: 61 MAIYVITLVRFRKKKGQEDYIPEQVEGNHKLEVIWTVIPIILVLVIAVPTVLGTFDL--- 117 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 ++ ++ + IEV + W F Y + + T ++ P VY + S+ V +SF+IP Sbjct: 118 ADDSNADEHVNIEVTGNQYWWHFNYAGEEVVTSQDLYIPTGERVYLNMLSSDVTHSFWIP 177 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 + ++ +++ A+E G Y G A GP S M FK IA ++QWVA Sbjct: 178 SISGKMDVNPENVNTMYIEAHEEGVYWGKCAELCGPSHSLMDFKVIAV-SPEEYEQWVAD 236 Query: 238 AKQ 240 + Sbjct: 237 MQS 239 >UniRef50_C6IYM5 Quinol oxidase subunit II n=2 Tax=Bacillales RepID=C6IYM5_9BACL Length = 318 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 23 SGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY-SP 80 +GCN +LDPKG + Q +I+ + M +++ + + KYRAS Y P Sbjct: 19 TGCNQLTVLDPKGPVAKTQSQVIIFSIVTMAFILLVVYTLYIYMLTKYRASKAAPDYEPP 78 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 + S +E T+PI+I+ L+V+T ++T A+E D+KP+ I S +WKW F Sbjct: 79 HVEGSKWLEITWITIPIIIVAVLSVVTVRSTSAVEKVPKGYEDQKPLVIYAASSNWKWHF 138 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPE+GI TVN + FP N PV F++ S + SF+IP+L Q YAM+ M L+++A Sbjct: 139 SYPEEGIETVNYVNFPTNRPVEFRLYSYGPITSFWIPQLAGQKYAMSDMVNTLNIVAEHE 198 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G+Y G ++++SG GF+ M+F+A+A + +D+WV + K + +++ + F+KL + Sbjct: 199 GSYMGKNSNFSGEGFAHMEFEALAMA-PSEYDKWVKEVKDTAPELTE-SEFDKLLETAHV 256 Query: 261 NQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSA--HEGM--EGMDMSHAESAH 315 + Y S+ D + H + E +HS H M MDM+ S H Sbjct: 257 GRQTY-SSTHLDFRPAPEGENAGHNHGGENGSEEMDHSTMDHSTMDHSDMDMTEESSGH 314 >UniRef50_Q0AI63 Cytochrome c oxidase, subunit II n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AI63_NITEC Length = 333 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 107/298 (35%), Positives = 154/298 (51%), Gaps = 22/298 (7%) Query: 7 NKSLGWLSL-FAGTVLLSGCNS----ALLDPKGQIGLEQRSLILTAFGLMLIVV-IPAIL 60 + G LS+ + +LLSGCNS + L+P+G I Q ++ I++ +P + Sbjct: 22 LQQTGTLSVHYVALLLLSGCNSAEHLSFLNPQGPIATAQSEHFWLVVAILFILIALPVFI 81 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 AW YR +KY P W +E W +PI I++FL+VL W+ T +P L Sbjct: 82 GTAWIAWHYRYGATKSKYVPRWEIFKPLEYFSWGIPIAIVLFLSVLVWEDTERFDPYHTL 141 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 A + ++V+ DWKW F+YPE GIA+V +AFPA P+ ++TS +VM SFFIP LG Sbjct: 142 ASSKPATHVQVIGYDWKWLFVYPEHGIASVGMLAFPAEQPLTMELTSATVMQSFFIPALG 201 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 SQIYAM GM T+L+L A+ PG + G + YSG GF KF A+A FD WV + + Sbjct: 202 SQIYAMGGMVTQLNLQADRPGHFLGENTMYSGDGFHQQKFVAVAM-TLTDFDAWVQQVRA 260 Query: 241 SPNTMSDMAAFEKLAAPSEY--------------NQVEYFSNVKPDLFADVINKFMAH 284 + D AA +A + YF+ VK + F D++ M Sbjct: 261 TGIPF-DAAALNAIATQGTKAQLSTALAPAAPTFDGNVYFTGVKANFFTDLVISVMDE 317 >UniRef50_C6D2I7 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillales RepID=C6D2I7_PAESJ Length = 348 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 11/269 (4%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLD---PKGQIGLEQRSLILTAFGLMLIVVIP 57 M ++ + L L ++LS C + L P+G + EQ L+ A +MLIV++ Sbjct: 1 MNRWQFFRKLAPLLAL-MVLVLSACGRSDLSTLRPQGPVAEEQFGLMKLAISIMLIVIVV 59 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFL-AVLTWKTTHALEP 116 ++ ++R D P N ++WTV +I++ + V T ++ L Sbjct: 60 VFAISFYVIIRFRRRPGDNTI-PKQVEGNHKLEIIWTVIPIILLIILGVPTIQSVFNL-- 116 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 SK D + + + V + + W F YPE GI T E+ P + + S V++SF+I Sbjct: 117 SKDHTKDPEAVKVVVTAHQYWWEFEYPELGIKTAQELVIPKGKTISIEAKSADVLHSFWI 176 Query: 177 PRLGSQIYAMAG-MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 P L +I A G ++ A + G Y G A GP M FK + D A+FD+W Sbjct: 177 PSLAGKIDANPGANVNIMYFSAPKEGVYLGKCAELCGPSHGLMDFKVKSV-DEASFDRWT 235 Query: 236 AKAKQSPNTMSDMAAFEKL-AAPSEYNQV 263 A + SD A E + + V Sbjct: 236 AALQAPVALPSDPAIKEAFVSKCLTCHAV 264 >UniRef50_A5FXH9 Cytochrome c oxidase, subunit II n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FXH9_ACICJ Length = 334 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 95/268 (35%), Positives = 148/268 (55%), Gaps = 15/268 (5%) Query: 24 GCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 GC+ + DPKG + + + +M +++P + W+YR S A YSP Sbjct: 30 GCSGGPFRVFDPKGPVARASLNFTIIDVVVMAFIIVPTACFILWCIWRYRRSR-AAAYSP 88 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP-------LAHDEKPITIEVVS 133 +SHS K+EAV+W +PI+++ LA ++ T A++P P A P+ I+VV+ Sbjct: 89 GFSHSLKLEAVMWGIPIVVVAGLAYASYNGTFAVDPYGPHVLRMPARAGRSHPLKIDVVA 148 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 DW+W FIYP+Q +A+V+ + PA V F++TS SV+N FFIP+L I M GM+T+ Sbjct: 149 TDWQWLFIYPKQHVASVDRLVVPAGRNVEFRLTSTSVVNDFFIPQLTDMIDVMPGMRTKD 208 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 + AN G Y+G +A++SG GFS M+F R F ++V A +P ++ A FE+ Sbjct: 209 AMRANGQGRYEGFAANFSGAGFSWMRFATDVVGKR-GFAKFVRHAAAAPAALT-YATFER 266 Query: 254 LAAPSEY--NQVEYFSNVKPDLFADVIN 279 A P+ + YFS P LF ++ Sbjct: 267 FARPTINLDQRPRYFSAPAPHLFRRIVE 294 >UniRef50_B7DNN6 Cytochrome c oxidase subunit II n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNN6_9BACL Length = 311 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 154/292 (52%), Gaps = 8/292 (2%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS-NKDAKYSPNW 82 G N +L P G E LI+ + L+L+V++P + + W+YR + A Y+P W Sbjct: 24 GQNVLVLHPAGPAAREIDRLIILSVILLLVVIVPVFALTIYIVWRYRDKPDNRAPYTPQW 83 Query: 83 SHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY 142 + S +E + W++P++I+ L T KTT AL ++P + +T++VVS+DWKW F+Y Sbjct: 84 TESRALEWIWWSIPMVIVGVLGAYTAKTTFAL--TRPPESNGNVVTVDVVSLDWKWLFLY 141 Query: 143 PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 P+Q +ATVN P PV F +TS++ +NSF++P+L Q Y M GM RL + A++PG Sbjct: 142 PDQHVATVNYCVIPTGVPVQFVLTSDAPINSFWVPQLAGQEYTMPGMALRLWVQADQPGN 201 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQ 262 Y G A+++G GF+ M F A +AF W +Q +++ A ++ L P + Sbjct: 202 YYGHGANFTGKGFAEMSFTVQA-RSESAFRLWAQGLEQHAPALTE-AGYQLLKKPGVTGR 259 Query: 263 VEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESA 314 + Y N LF V+ + S P + +G G +++ Sbjct: 260 LSY-GNFPKGLFDQVVWQDGGQYMSGMWGTPTM--GSMDGQSGSNLASLGGG 308 >UniRef50_Q2IK63 Cytochrome c oxidase, subunit II n=3 Tax=Anaeromyxobacter RepID=Q2IK63_ANADE Length = 337 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 10/261 (3%) Query: 21 LLSGCNSALLDP-KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 LL+G L + + L F + + IL+ + F +YR Sbjct: 11 LLAGAGPGYLPARASSVAEGVDQVFLLLFWVSAFFLALIILLTIVFVLRYRRRATRLHPE 70 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 P+ +HS ++E + +P+ +++ L V++ +T + + P P+ ++V W W+ Sbjct: 71 PSPAHSTRLELLWSVIPLALVMALFVMSTRTWIQMTSADP---GGDPVRVQVTGRKWSWW 127 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 F +P A NE+ A PV +++ V++S ++P + A+ G TRL Sbjct: 128 FDHPSGKGA--NELHVVAGRPVELILSATDVIHSLYVPEFRLKQDAVPGRFTRLTFTPTV 185 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA----AFEKLA 255 PG+Y + A Y G S M + D+A+FD W + + T++D+ A + A Sbjct: 186 PGSYPILCAEYCGTDHSRMLSTVVVHADQASFDAWSKEGLPADATLADLGKQVFAEKGCA 245 Query: 256 APSEYNQVEYFSNVKPDLFAD 276 A + L+ Sbjct: 246 ACHSVDGTRSVGPSVRGLWKR 266 >UniRef50_C5D863 Cytochrome c oxidase subunit 2 n=87 Tax=cellular organisms RepID=C5D863_GEOSW Length = 356 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 15/257 (5%) Query: 3 LRKYNKSLGWLSLFAG-TVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++K+ + SLF+ +LL+GC + L P G+ Q SL+L + +ML+V++ Sbjct: 1 MKKWLHNWRLFSLFSMIALLLAGCGKPFLSTLQPAGEAADMQFSLMLLSTAIMLLVIVVV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFL-AVLTWKTTHALEPS 117 ++ V ++R + P N +VWTV +I++ + AV T K T L Sbjct: 61 TIIFVYVVIRFRQRKGEENKIPKQVEGNHTLEIVWTVIPIILLIILAVPTVKATFDLADV 120 Query: 118 KPL---AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSF 174 KP+ D+ + + V + + W F YP+ G+ T ++ P + VYF + ++ V +SF Sbjct: 121 KPMNKEKRDKDTLVVNVRASLYWWEFEYPDYGVITSQDLVVPTDERVYFNLKASDVKHSF 180 Query: 175 FIPRLGSQIYAMAGMQTRLHLI-----ANEPG-TYDGISASYSGPGFSGMKFKAIATPDR 228 +IP +G +I + + L A + G + G A GP + M FK A P R Sbjct: 181 WIPAVGGKIDTNIENKNQFWLEFDQERAEKAGNIFYGKCAELCGPSHALMDFKVKAVP-R 239 Query: 229 AAFDQWVAKAKQSPNTM 245 FDQW+ K K + + Sbjct: 240 EEFDQWIEKMKNAKKPV 256 >UniRef50_D1CCH9 Cytochrome c oxidase, subunit II n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCH9_THET1 Length = 342 Score = 231 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 78/203 (38%), Gaps = 8/203 (3%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 + L L ++ I ++ V FA +YR + Y P N + Sbjct: 4 ASNFAGQVDLLFWFITILSALIAIGVFILIVVFATRYRRR--YSGYVPPAIEGNNRLEIA 61 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 W V I +I LA W + P + +TI VV W W P G NE Sbjct: 62 WIV-IPTVIALATFAWAAVVYVHMHNP---PKDALTIYVVGRQWMWKAQQP-TGQWENNE 116 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P PV +TS V++ FF+P + + G T + A +PG YD A Y G Sbjct: 117 LHVPVGKPVKLVMTSQDVIHDFFVPAFRVKQDVIPGRYTTMWFTAEKPGVYDLFCAEYCG 176 Query: 213 PGFSGMKFKAIATPDRAAFDQWV 235 S M K A + ++ W+ Sbjct: 177 TNHSEMIGKVYAL-SQQDYEAWL 198 >UniRef50_A4A2K3 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2K3_9PLAN Length = 337 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 20/297 (6%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 + ++ +L ++L ++L + DP +E R L + ++ + Sbjct: 1 MMRWPLALALVAL--SPLVLVAQTPEMFDPASPDAIEIRELFYLVLAITTLIFVLVGGAL 58 Query: 63 VGFAWKYR---ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 F +++R + +D P S +E P LI++ L+++ ++ A+ P Sbjct: 59 AYFIYRFRDPPGAPRDDSEPPQIYGSQPIEIAWTLAPTLIVLVLSLVVIRSVIAMRSEPP 118 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFP-----ANTPVYFKVTSNSVMNSF 174 E + + V W W F YPE G T NE+ P A TPVY ++ S V++SF Sbjct: 119 T---EGTLRVRAVGHQWWWEFEYPEFGFTTANELVIPTSDADAPTPVYLQLESADVIHSF 175 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 ++P+L + + R+ L AN G Y+G A Y G + M + A A F++W Sbjct: 176 WVPKLAGKTDLVPAKTNRMRLEANAAGIYEGRCAEYCGTQHAKMLIRVTAV-SPAEFEKW 234 Query: 235 VAKAKQSPNTMSDMAAF------EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 VA ++S + + A + A PDL + +A G Sbjct: 235 VADQQRSAAVAASVDAGRQIFMDQACANCHTIRGEPAIGKFGPDLTHLMSRHTIASG 291 >UniRef50_C1SI89 Cytochrome c oxidase subunit 2 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SI89_9BACT Length = 402 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 19/259 (7%) Query: 39 EQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PI 97 + FG+ ++I L+AV F +KY + N + WT+ P Sbjct: 7 RVDTAFQFIFGISFAIMILITLVAVFFLFKYHHTKHPDASE---IDGNVAAELTWTIIPT 63 Query: 98 LIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPA 157 LI++ + W AL + + ++V + W W F YP T E+ PA Sbjct: 64 LIVLAMFWFGWSGYKALR-----SAPADSMEVQVTARMWSWKFEYPNGK--TSKELYVPA 116 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 N PV +TS V++SF++P ++ + GM T + A EP YD + A Y G + Sbjct: 117 NKPVKLNMTSLDVIHSFYVPAYRVKMDTVPGMNTYVWFNAGEPAQYDILCAEYCGVRHAF 176 Query: 218 MKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADV 277 M K + P+ ++ W+A +Q + A + + + ++ V P F D+ Sbjct: 177 MLSKVVVLPEE-EYELWLASDEQPSTDKPEAVAILEKHGCIDCHSLDGTELVGP-TFKDI 234 Query: 278 INKFMAHGKSMDMTQPEGE 296 +G+ + P+GE Sbjct: 235 ------YGRETVVVTPDGE 247 >UniRef50_A9LGT2 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomycetales RepID=A9LGT2_9BACT Length = 324 Score = 227 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 17/257 (6%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 + DP R L + + + + +K+R+ K P + Sbjct: 16 PVFDPASPQAEAIRDLFVQVLWISGGIFSIVAGLICVALFKFRSKGK----LPAQDFGSH 71 Query: 88 VEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIE--VVSMDWKWFFIYPE 144 + + W V P+++++++A ++ K P AH + V W W Y Sbjct: 72 RKEIAWIVAPVIVVLWIAAISAKLVLTFNAV-PQAHPPGEQVADLIVTGHQWWWEIEYAG 130 Query: 145 QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYD 204 I + NEI P + +++S V++SF++ RL ++ A+ G + + L A+EPG Y Sbjct: 131 TDIVSANEIHIPTGKRLRVQLSSADVIHSFWVARLARKMDAIPGRENFIWLQADEPGVYQ 190 Query: 205 GISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE--------KLAA 256 G A + G + M F A D ++QW++K K P T + A + Sbjct: 191 GRCAEFCGTQHAWMNFLVHAH-DPEEYEQWLSKEKVVPPTPVEPNAVAGRKTFLSLTCSQ 249 Query: 257 PSEYNQVEYFSNVKPDL 273 ++ PDL Sbjct: 250 CHAIAGTGARRSIAPDL 266 >UniRef50_C1XKJ9 Cytochrome c oxidase subunit 2 n=2 Tax=Meiothermus RepID=C1XKJ9_MEIRU Length = 355 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 29/289 (10%) Query: 7 NKSLGWLSLFAGTVLLS-------GCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPA 58 +SLG + L ++L+ G +LD E R L++ G +V + Sbjct: 3 QRSLGLIVLLMLGLVLAAEPGQAGGHTLNILDRDASAFNREVRGLLVWVMGFAALVFVVV 62 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPS 117 V K+R + K+ P H N V WTV P +I++ + LT ++ L+ Sbjct: 63 TGALVYVTVKFRRTGKETG-EPEQMHGNDRLEVAWTVIPTVIVLIIFGLTAQSMFKLDRP 121 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNS-----VMN 172 P + +EV + W F Y + G+ NE+ P PV F++T V++ Sbjct: 122 TP-----GAMVVEVRGWQFWWDFHYKDYGVRNSNELILPVGKPVRFEITGGDGTNYDVIH 176 Query: 173 SFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFD 232 SF I + A+ G+ T + + + GTY G G + M+F+ P + FD Sbjct: 177 SFRITSMVGARDAIPGVVTHIEVTPEKIGTYYGQCVELCGASHANMRFRVKVVP-QEEFD 235 Query: 233 QWVAKAKQ-------SPNTMSDMAAF-EKLAAPSEYNQVEYFSNVKPDL 273 +W+ A+ P + + ++ AA V + PDL Sbjct: 236 RWIEGARAFQAATPTDPTLVRGQELYKQQCAACHAIKGVSQGAPNNPDL 284 >UniRef50_B3Q582 Probable cytochrome c oxidase protein, subunit II n=2 Tax=Rhizobium etli RepID=B3Q582_RHIE6 Length = 332 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 109/276 (39%), Gaps = 25/276 (9%) Query: 14 SLFAGTVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 SLF + LS C + L+ G +E R L+L + +V + L+ AW Sbjct: 8 SLFPHLLFLSSCTGDPQSALNADGPSAMELRELLLLFVAVCGVVFV---LVMAVMAWALL 64 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIII-FLAVLTWKTTHALEPSKPLAHDEKPITI 129 SN A P S V +++I FL V ++ T +++ + P TI Sbjct: 65 RSNNPAPGRPQTERSMGRAVSAAIVGTVLVITFLTVSSFYATRSID-----WREADPATI 119 Query: 130 EVVSMDWKWFFIY----PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 V W W F Y P + T NE+ P T V ++ + V++SF++P L + Sbjct: 120 VVRGQQWWWQFTYLDADPAKTFQTANELHIPVGTDVRLRLEATDVIHSFWVPNLTGKQDL 179 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 + G + L L A+ PG Y G A + G S M +A + + +W+ +++ Sbjct: 180 VPGRENGLTLHADNPGIYRGQCAEFCGLQHSHMALLVVAE-EPDEYARWLDAQRRAAVEP 238 Query: 246 SDMAAFEK--------LAAPSEYNQVEYFSNVKPDL 273 +D A AA PDL Sbjct: 239 ADGDAAAGKLVFISKPCAACHTVRGTAAGGISGPDL 274 >UniRef50_A5GCS3 Cytochrome C oxidase subunit II, transmembrane region n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GCS3_GEOUR Length = 311 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 95/250 (38%), Gaps = 14/250 (5%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW 93 GQ+ E +L + + L + + FA +YR + + + N++ VW Sbjct: 10 GQLAEEVDALFIFILLVGLFFFLITQGALIWFAVRYRKRKGEKEPDTPYITGNRLLETVW 69 Query: 94 TV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 V P +I+ + + + + P I V + W + F YP+ G VNE Sbjct: 70 VVVPSFLILAIFIYGYLVFRDIRTPPPGTA-----EINVTARQWLYLFKYPD-GRTAVNE 123 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P PV F +TS V++ F++P + + G T L L + G YD Y G Sbjct: 124 VRVPQGKPVRFIMTSADVIHGFYLPEFRLKQDILPGSYTSLWLQPEKEGKYDIYCTQYCG 183 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQSP------NTMSDMAAFEKLAAPSEYNQVEYF 266 G S M+ I P+ + +W+A ++ ++A A + Sbjct: 184 TGHSTMRAVMIVMPEE-EYREWLAGKEEEEKGEPLWEKGKELAEKSGCLACHSIDGSPKI 242 Query: 267 SNVKPDLFAD 276 LF Sbjct: 243 GPTWKGLFGR 252 >UniRef50_Q0ABY9 Cytochrome c oxidase subunit 2 n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABY9_ALHEH Length = 311 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 101/279 (36%), Gaps = 48/279 (17%) Query: 13 LSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 LS F+ L G SAL P+G L Q L + V I ++ F Sbjct: 12 LSAFSSAAL--GGFSALNMPRGPTALSQDVYDLHMLVFWICVAIGVVVFGAIFYSILTHR 69 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVV 132 +SHS ++E V +P +I+I +AV KT +E + +T++V Sbjct: 70 KSRGVKPSQFSHSTRLEVVWTIIPFVILIVMAVPATKTLLDME-----DVSDYDLTVKVT 124 Query: 133 SMDWKWFFIYPEQG---------------------------------IATVNEIAFPANT 159 W W + Y + + N + P Sbjct: 125 GYQWLWHYEYMDGDAEGTAFYSSMDRDTRLARIRANGLSPADVDNYLLEVDNPLVLPVGK 184 Query: 160 PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 V F +TSN V++S+++P G + + G + +EPGTY G A G + M Sbjct: 185 RVRFLLTSNDVIHSWWVPEFGWKKDTIPGFVNEAWVQVDEPGTYRGQCAELCGRDHAFMP 244 Query: 220 FKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPS 258 + + + WV + + A E+LAAP Sbjct: 245 I-VVVVKEEEDYLAWVDEQ-------VNGAGGEQLAAPG 275 >UniRef50_Q1H1C0 Cytochrome c oxidase subunit 2 n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H1C0_METFK Length = 346 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 106/274 (38%), Gaps = 26/274 (9%) Query: 16 FAGTVLLSGCNSALLDPKGQIGLEQRSLILTAF---GLMLIVVIPAILMAVGFAWKYRAS 72 F L + N + L P+G + L GL+L +V+ + +A+ RA Sbjct: 25 FMCICLPADANQSALQPEGPLAKVVADLFWGMVAVGGLILFIVLAMLAVALL-----RAR 79 Query: 73 NKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 N ++ S + + V P LI+ + + + P E +TI+V Sbjct: 80 NNAEPRPLTFTQSRNLVFISGVVIPALILTVFVISSAAVNREIVAPMP----EHALTIKV 135 Query: 132 VSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 W W Y + T NEI P PV + ++ V++SF+IP+L + + Sbjct: 136 TGHQWWWEVDYLDTEGNHVAKTANEIRIPVGKPVRIALEASDVIHSFWIPQLNGKTDMVP 195 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP----- 242 G + + A++PG+Y G + G + M F A P+ F+ W+ + Q Sbjct: 196 GKRNLTWVQADQPGSYRGQCTEFCGKQHAKMAFTVDAVPEE-DFETWLQRQAQPAREPAT 254 Query: 243 -NTMSDMAAFEK--LAAPSEYNQVEYFSNVKPDL 273 N F + A ++V PDL Sbjct: 255 ENETKGRQVFLRSSCAMCHAIRGTTALASVAPDL 288 >UniRef50_B1ZVF0 Cytochrome c oxidase subunit 2 n=2 Tax=Verrucomicrobia RepID=B1ZVF0_OPITP Length = 311 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 15/272 (5%) Query: 22 LSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 ++G + ++ +P L + + ++ +YR DA+ Sbjct: 1 MNGESGSIFNPAAPHAQAISDLFVINLWVCAVIFALVAGAVGYSLVRYRWREGDAEPV-Q 59 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI 141 + VE + +P LI++ L LT HA++ S P A E + I + W W Sbjct: 60 LAGHTTVEIIWTVIPFLIVVVLFGLTV---HAMQKSDPPAAPEPDLVI--IGHQWWWEIR 114 Query: 142 YPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 P+ G NEI P P+ ++ + V++ F++PRL ++ + G + + A++PG Sbjct: 115 DPKLGYVAANEIHIPVGKPLSIRLDTVDVLHEFWVPRLTRKMTTVPGAGNHVWMQADQPG 174 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS------DMAAFEKLA 255 Y G+ + + G + M+F+ IA +A ++ WV + +Q+ F +L Sbjct: 175 VYQGVCSEFCGTQHAWMRFEVIAE-SQADYEAWVRQQQQAAPAPPTPVAARGQQLFRELT 233 Query: 256 --APSEYNQVEYFSNVKPDLFADVINKFMAHG 285 SN PDL +++ G Sbjct: 234 CVNCHAIQGAGGTSNAGPDLTHLAGRRYLGAG 265 >UniRef50_D1YAK0 Cytochrome c oxidase subunit 2 n=3 Tax=Propionibacterium acnes RepID=D1YAK0_PROAC Length = 302 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 102/265 (38%), Gaps = 28/265 (10%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSA---------LLDPKGQIGLEQRSLILTAFGLMLI 53 R K+ G + V LSGC S L+DP + ++ + A+ L+ Sbjct: 20 RRAAGKAGGICAAVIAVVALSGCGSTGPGRAARLGLVDPASDRAVHMGNMWIGAWVAALV 79 Query: 54 VVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHA 113 + + + A+K+R + D + +E + VP L+I L T +T + Sbjct: 80 IGVFVWGLIGFAAFKFRRKDGDPAIPRQSRYHLPLEVLYTIVPFLVIGVLFFYTVRTENK 139 Query: 114 LEPSKPLAHDEKPITIEVVSMDWKWFFIY-----PEQGIATVNE---------IAFPANT 159 + P + VV W W F Y P+ G +E + P N Sbjct: 140 VLDKDPDPQH----VVNVVGQKWSWTFNYMEANNPDAGGVVTHEVGTIEKIPDLYLPVNQ 195 Query: 160 PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 V F++ S V++SF++P ++ + G + L + G YDG A G + M Sbjct: 196 SVRFRLKSADVIHSFWVPAFYFKMDVIPGHPNQFDLTPTKIGVYDGKCAELCGTYHANMI 255 Query: 220 FKAIATPDRAAFDQWVAKAKQSPNT 244 FK +++ + + K +T Sbjct: 256 FKVHVV-SVEDYNKHLQQLKAQGDT 279 >UniRef50_A9WF38 Cytochrome c oxidase subunit 2 n=3 Tax=Chloroflexus RepID=A9WF38_CHLAA Length = 330 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 8/206 (3%) Query: 31 DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEA 90 D + L L LI + + +Y S K + +P SN Sbjct: 9 DQASTFATQVDQLYFFLVALSLIFAGVLPFVILYLIVRYHRSQKVDRSNP--VDSNLKLE 66 Query: 91 VVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV 150 + WT+ LI++ L V W ++ P A + + V+ W W +P G Sbjct: 67 LTWTIIPLILVML-VFFWGAFLYVQMRTPPAR---TLDVYVIGKQWMWHVQHPN-GKREN 121 Query: 151 NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASY 210 NE+ P PV +TS V++SF+IP + + G T + A +PG Y A Y Sbjct: 122 NELHVPIGQPVKLIMTSQDVIHSFYIPAFRVKQDVLPGRYTIMWFEATKPGEYHLFCAEY 181 Query: 211 SGPGFSGMKFKAIATPDRAAFDQWVA 236 G S M + +A P A +++W+A Sbjct: 182 CGTEHSLMIGRVVAMP-LADYERWLA 206 >UniRef50_A4VKM4 Heme/copper-type cytochrome/quinol oxidase, subunit 2 n=4 Tax=Proteobacteria RepID=A4VKM4_PSEU5 Length = 532 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 119/291 (40%), Gaps = 18/291 (6%) Query: 4 RKYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILM 61 R+ W +L LL GC + L P G + + ++ FG ++V+ + Sbjct: 203 RRGGNPFKWTTLALAVPLLLGCEGPQSALSPAGPMARDVANVWWAMFGFSVVVLAVVSAL 262 Query: 62 AVGFAWKYRASN---KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 + + ++ + + + W + V+ TV I+ ++ + T ++ L Sbjct: 263 WIYAMLRQPRTHSAEEAKRINRRWIIGGGL--VLPTVSIVALLAFGIPTGRSMLPL---- 316 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 E+P+ ++V+ W W YPE G+ T N+ P + PV +VTS V++SF++PR Sbjct: 317 -PVEGEQPLRVQVIGHQWWWEVRYPESGVVTANQFILPIDRPVDVEVTSADVIHSFWVPR 375 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA-- 236 LG ++ + G L L A++ G + G + + G + M A + AF W+ Sbjct: 376 LGGKLDMVPGRTNTLRLQASQTGVFRGQCSEFCGSQHAHMILHVEAL-EADAFATWIEAR 434 Query: 237 --KAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 + Q P + E+ V N PDL + G Sbjct: 435 TGREHQPPGGAAGQVFDERCGQCHRVAGVS-DGNRAPDLSDLATRPTLGAG 484 >UniRef50_C1A5N6 Cytochrome c oxidase subunit 2 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5N6_GEMAT Length = 429 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 11/219 (5%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 + + + +L +V I V ++YR A +P H N Sbjct: 33 STFNHYTEYNTAIDALWDKLLFWGTLVFIGVEAGLVYTIFRYRRRPGGA--TPKQVHGNT 90 Query: 88 VEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 + WT +P +I++F+A+ T T + + +EV+ W W F YP+ G Sbjct: 91 ALEITWTAIPAVILVFIAIPTVSTIFKTQAK----AAPDALQVEVIGHQWWWEFKYPQLG 146 Query: 147 IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP---GTY 203 I T NE+ P V F++ + V++SF+IP++G + ++ L N + Sbjct: 147 ITTANELYLPNGRTVNFQLKTVDVLHSFWIPQMGGKRDLVSNRTNYLWFTPNADLPSSAW 206 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 +G A + G + M+F+ T A F+QW A KQ Sbjct: 207 NGFCAEFCGASHANMRFRV-YTVTPAEFEQWAAHQKQPA 244 >UniRef50_Q39Z27 Cytochrome c oxidase subunit 2 n=4 Tax=Geobacter RepID=Q39Z27_GEOMG Length = 302 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 13/242 (5%) Query: 38 LEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VP 96 + + FG+ L++++ VGF +YR S A + + SN ++WT +P Sbjct: 10 RAVDPVFIWIFGVSLVLLLGITATMVGFVIRYRRSR--APEPTSQAASNIWLEIIWTALP 67 Query: 97 ILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFP 156 +I++ + W L + + + + W W F Y T + P Sbjct: 68 TIIVMAMFYYGWAGYLTLRNV-----PKDALEVTATARMWSWSFTYANGK--TSPTLYVP 120 Query: 157 ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 PV + S V++ F++P + + GM+ + +A++PGTYD + Y G G S Sbjct: 121 VGKPVLVHLVSEDVIHGFYVPAFRVKHDVVPGMKNHVWFVADKPGTYDLFCSVYCGLGHS 180 Query: 217 GMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK--LAAPSEYNQVEYFSNVKPDLF 274 GM +A P+ A F W+AKA++ N A EK + ++ Sbjct: 181 GMVSTVVAVPE-AEFQAWLAKAEKEENQGGGRALLEKNGCLGCHSLDGSRKVGPSFKGIW 239 Query: 275 AD 276 Sbjct: 240 GR 241 >UniRef50_C1F1C9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F1C9_ACIC5 Length = 347 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 100/298 (33%), Gaps = 24/298 (8%) Query: 12 WLSLFAGTVLLSGCNSAL--------LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAV 63 L + L A P + E L + A + + + Sbjct: 12 ILYAAGCAMFLQAGAWAQTITTNTDSFSPASKPAHEIFGLAIFALAITGGIFVVVAAAMF 71 Query: 64 GFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF-LAVLTWKTTHALEPSKPLAH 122 +YR D P + + WTV +II+ L + + + A+ K Sbjct: 72 YAVIRYRRRKDDDGSEPPQIFGSVQIEIAWTVIPIIIVVVLFLTSARLIFAI---KDAPR 128 Query: 123 DEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPAN-----TPVYFKVTSNSVMNSFFIP 177 + + I VV + W YP GI T NEI P + P Y K+ S V++SF++P Sbjct: 129 PKSALNITVVGHQFWWEIRYPGLGIITANEIHVPVSTKADPQPTYIKLLSADVVHSFWVP 188 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 +L + A+ + G Y G + + G + M + A F+ WV + Sbjct: 189 QLAGKTDAIPNHVNETWIEPTHTGIYKGQCSQFCGAEHAKMLLRV-YVDTPAQFEAWVKQ 247 Query: 238 AKQSPNTMSDMAAF------EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 +Q +AA E E PDL +A G M+ Sbjct: 248 QQQPAVEDPAVAAGREVFMHNACMNCHEIRGTEATGRFGPDLTHVASRDTLASGSVMN 305 >UniRef50_A9B5D1 Cytochrome c oxidase subunit 2 n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5D1_HERA2 Length = 359 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 115/292 (39%), Gaps = 23/292 (7%) Query: 1 MRLRKYNKSL--GWLSLFAGTVLLSGCNS----ALLDPKGQIGLEQRSLILTAFGLMLIV 54 M R K+L +L G+V+L+ C L+P + +L F L ++V Sbjct: 1 MPNRSPAKALLRPTATLLLGSVVLAACGQKTPQTTLNPASESTRAIYNLSELLFWLGVVV 60 Query: 55 VIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFL-AVLTWKTTHA 113 + + KYR KD+ P H N + WT+ II + V T+ T Sbjct: 61 FLIVQTWLIVSIIKYR--QKDSSQIPTQIHGNTKVEIAWTIVPAIIAIVIFVFTFDTIRK 118 Query: 114 LEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG------IATVNEIAFPANTPVYFKVTS 167 +E P + ++V+ W W F YP+ + T NE+ P+ + + K+TS Sbjct: 119 IE-FMPDEAAGNTLNVKVIGHQWWWEFQYPDIKDASGKPLVTANELWIPSGSYIDVKMTS 177 Query: 168 NSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE-----PGTYDGISASYSGPGFSGMKFKA 222 V++ F+IP L + M ++ L A++ P + G A Y G + MK + Sbjct: 178 VDVIHDFWIPGLAGKRDVMPNRESGLWFKADDVADGSPAVFWGQCAEYCGGQHAYMKMRV 237 Query: 223 IATPDRAAFDQWVAKAKQSPNTMSDMAAFEK-LAAPSEYNQVEYFSNVKPDL 273 + A F +W ++ Q + +F K PDL Sbjct: 238 VVA-SPADFQKWSSEQSQVAVNTTLPESFTKNCIGCHVVRGTNAAGITGPDL 288 >UniRef50_D1RCQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Legionella longbeachae D-4968 RepID=D1RCQ5_LEGLO Length = 401 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 68/302 (22%), Positives = 121/302 (40%), Gaps = 39/302 (12%) Query: 1 MRLRKYNKSLGWLSLFAGT--VLLSGCNSALLDPKG--QIGLEQRSLILTAFGLMLIVVI 56 + K K + L ++ G+ + + N L +G I + L + + ++ + Sbjct: 2 LNRLKICKLIIMLGVWCGSQPIFAAANNWQLNMYEGVTPISKDAYYLHMVCMAVCAVIGV 61 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALE 115 + + +R S Y H N + W+V P LI++ LA+ + ++ Sbjct: 62 VVFGVMIYSMIHHRKSKG---YKAASFHDNPRLEIFWSVIPFLILVGLAIPATRVLMRMD 118 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV----------------NE------- 152 ++ + IT+++V WKW + Y +QGI+ NE Sbjct: 119 DTR-----QSEITVKIVGYQWKWQYEYLDQGISYFSILSTPFNQIENTQKKNEWYLLEVD 173 Query: 153 --IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASY 210 + P N V F VTSN V++S+++P LG + A+ G +PGTY G A Sbjct: 174 KPLVLPVNKKVRFLVTSNDVVHSWWVPELGIKRDAIPGFMYEAWATIEKPGTYRGQCAEL 233 Query: 211 SGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVK 270 G M A + FD+WVA +S + ++ A E + +++ F K Sbjct: 234 CGVNHGFMPIVVEAV-SQDDFDKWVASQTKSEDKYANEEAAEAVQKTMTRDELLAFGKEK 292 Query: 271 PD 272 D Sbjct: 293 YD 294 >UniRef50_A3K373 Cytochrome o ubiquinol oxidase, subunit II n=1 Tax=Sagittula stellata E-37 RepID=A3K373_9RHOB Length = 332 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 145/290 (50%), Gaps = 17/290 (5%) Query: 15 LFAGTVLLSGCNSA----LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 LF +L++ + A L P G I +Q + L A + L+ V+PA+++ ++YR Sbjct: 4 LFVAGLLIASPDRANAADLFSPIGPIMQDQSAHFLRAALIALVAVLPAMILLPIMLFRYR 63 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIE 130 A+Y+P+W + EA +W VP+L+I LA + T L+P +PL D P+ I+ Sbjct: 64 IG-GSARYTPDWEFNKWFEAAIWGVPVLVICVLAFWLAQATLKLDPYQPLGDD--PLEID 120 Query: 131 VVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 +V D+++ IYP+Q +A ++EI P PV F++T+++VM SF QIYAM GM Sbjct: 121 LVGTDFRYLAIYPDQQVAALDEIVIPTGRPVTFRLTTDTVMQSFLPNGFAGQIYAMPGMI 180 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 T+L+L AN G ++G GF+ M+ A A FD WV A +P D + Sbjct: 181 TKLNLAANREGEGLATQTQFNGYGFANMRVPMRAV-SAAQFDAWVDGATGAP---LDAES 236 Query: 251 FEKLA----APSEYNQ--VEYFSNVKPDLFADVINKFMAHGKSMDMTQPE 294 + +L + EY+ E LF V+ ++ QP Sbjct: 237 YARLVVKGDSAQEYHPATPELRPLADACLFDRVVARYHQGTAVPPEAQPG 286 >UniRef50_B1ZMS7 Cytochrome c oxidase subunit 2 n=2 Tax=Opitutaceae RepID=B1ZMS7_OPITP Length = 425 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 11/220 (5%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY--SPNWSHS 85 + + G + Q + ++L++ + K+RA N ++ P SH Sbjct: 47 SAVHADGPVARAQAEVFHVTVWVVLVIFVLVGSTLAYAILKFRARNAADEHAAPPPQSHG 106 Query: 86 NKVEAV-VWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 N + + + +L ++ +AV T K P I W + F YP Sbjct: 107 NPLIELSLIGASVLALVVIAVPTLKGIWYTHDV-PAEEKADAYPITAQGYQWWFRFEYPN 165 Query: 145 QGI------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIAN 198 + I T NE+ PA PV + V++SF++PRL ++ + L L A+ Sbjct: 166 EQIPNVGSLVTSNELVIPAGRPVRIDLRGMDVIHSFWVPRLAGKVDMIPNRANFLWLKAD 225 Query: 199 EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 EPG + G A Y G + M+F+ IA R F++W+ + Sbjct: 226 EPGYFWGQCAEYCGDSHAVMRFRVIALGPR-EFNEWLEQQ 264 >UniRef50_Q04PG8 Cytochrome c oxidase subunit 2 n=7 Tax=Bacteria RepID=Q04PG8_LEPBJ Length = 333 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 110/303 (36%), Gaps = 35/303 (11%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 + WL+L T + S + ++ L L GL+ V++ + F +KY Sbjct: 1 MTWLNLITATSFMPVQASEVAK-----NVDNLYLFLLVSGLISFVILIGGMT--WFIFKY 53 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R +A + +H+ E + +P++I+I + W+ L H++ + I Sbjct: 54 RR-KTEADKTAYITHNTLAEFLWSFIPLVIMIVIFWWGWRIFADLRSV----HEKGDLEI 108 Query: 130 EVVSMDWKWFFIYPEQGIATV--------------NEIAFPANTPVYFKVTSNSVMNSFF 175 V + W+W F YP G+ V N I P +TS V++SF+ Sbjct: 109 HVTARQWQWTFKYPN-GVTVVSPNATEKLNTLFQPNGIYVPVGKTTRLVMTSQDVIHSFY 167 Query: 176 IPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 +P +++ A+ G T L E G + + G S M AI D FD+W Sbjct: 168 VPAFRNKMDAIPGRYTTLTFTPTEKGDFVVYCTEFCGTSHSNM-LSAIRVVDPEIFDKWY 226 Query: 236 AKA------KQSPNTMSDMAAFEK-LAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM 288 A A K P + EK A + LF G + Sbjct: 227 AAAGNVDLSKIPPVELGKKLYAEKACAGCHSTDGSRLVGPSYKGLFGSTREFESGPGATA 286 Query: 289 DMT 291 D Sbjct: 287 DEN 289 >UniRef50_Q01PD2 Cytochrome c oxidase subunit 2 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PD2_SOLUE Length = 341 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 101/275 (36%), Gaps = 18/275 (6%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 + P L L + + + + ++R + D P + + Sbjct: 30 TIFSPVSTPADSIFHLSLFVLAVAAAIFTVVFSLLIYSLVRFRKRSDDDGREPPQIYGSN 89 Query: 88 VEAVVWTV-PILIIIFLAVLTWKTTH-ALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 + WTV PILI++ L + T + L+ S+P + + + V + W F YP Sbjct: 90 QVELAWTVVPILIVVTLFMATARVIAGTLKASRPSSS----VEVVAVGHQFWWEFRYPGL 145 Query: 146 GIATVNEIAFPAN-----TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 + T NE+ P + TP + +TS +SF++PRL + + + + +EP Sbjct: 146 KVVTANELHVPLSEPGHPTPTFITLTSADTDHSFWVPRLAGKTDLIPNRVNTMWIDPHEP 205 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK------L 254 G Y G A Y G + M + R F +W+ + +Q + + A + Sbjct: 206 GLYLGQCAQYCGTQHAKMLLRV-YVQTRDEFARWIQEQRQPAHAEDSVYAGRQIFETTAC 264 Query: 255 AAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 PDL + +A G + Sbjct: 265 INCHTVTGTTAHGTFGPDLTHLMSRDTIASGAVPN 299 >UniRef50_A9F508 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F508_SORC5 Length = 316 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 93/247 (37%), Gaps = 12/247 (4%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW 93 + + A+ +I I V FA KYR ++ K SP HS VE V Sbjct: 19 STLAEHIDAGWDAAYWTAVIFFILVTGAVVLFALKYRRRSERDKTSP-IDHSTTVEVVWT 77 Query: 94 TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEI 153 +P+ I+I L + + + I V + W F YP+ G TVNE+ Sbjct: 78 LIPLAIVIALFFVGLRGYV-----HASVAPAESYEINVTGEMYMWTFTYPD-GTTTVNEL 131 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 A P PV ++S +++SF+IP + + G T L A E + Y G Sbjct: 132 AVPRGRPVRLIMSSKDILHSFYIPEFRVKQDVVPGSYTSLWFEATETRETVLLCTEYCGS 191 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAKQS---PNTMSDMA-AFEKLAAPSEYNQVEYFSNV 269 G S M + +++ F++W+ S P + + A A + Sbjct: 192 GHSDM-LATVKVLEQSDFEKWLEGNNNSDLPPEELGKLLFAKRSCATCHSLDGTRIQGPS 250 Query: 270 KPDLFAD 276 LF Sbjct: 251 LKGLFGR 257 >UniRef50_D0MDE2 Cytochrome c oxidase subunit 2 n=3 Tax=Rhodothermaceae RepID=D0MDE2_RHOM4 Length = 316 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 103/268 (38%), Gaps = 16/268 (5%) Query: 16 FAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 +G +LL + L + I E SL + I+ I + F +YR +D Sbjct: 1 MSGMILLQ-NTAWLPEAASSIAPEVDSLFHFWTLVSAIIFIGVVGAMTFFVVRYRRRRRD 59 Query: 76 AKYSPNWSHSNKVEAVVW-TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 P KV + W VP ++++ + ++ + + P I V Sbjct: 60 E--VPEPVQEKKVVELAWIVVPTILVLIVFAWGFRVYIKMYTAPP-----DAYEILVHGY 112 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 W W F YP G+ T NE+ PA PV ++TS V++SF++P + + + L Sbjct: 113 QWYWEFEYPN-GVKTTNELHVPAGQPVKLRMTSADVIHSFYVPAFRVKQDVLPDRYSALW 171 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK-QSPNTMSDMAAF-- 251 A +PG Y Y G +GM K I P R F+QW+ A ++++ A Sbjct: 172 FEATKPGEYTVFCTEYCGTQHAGMLAKVIVHP-REEFEQWLESAGIPEDMPLAELGARLY 230 Query: 252 --EKLAAPSEYNQVEYFSNVKPDLFADV 277 + + + L+ Sbjct: 231 REKACFSCHSIDGSRLVGPSFKGLYGST 258 >UniRef50_Q72B26 Cytochrome c oxidase subunit 2 n=6 Tax=Desulfovibrionales RepID=Q72B26_DESVH Length = 426 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 89/246 (36%), Gaps = 11/246 (4%) Query: 32 PKGQIGLEQRSL-ILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEA 90 P+ ++Q L FG+ I+++ + F W+Y + S E Sbjct: 3 PQSLSPVQQVDLAFYVIFGVSAIMLLGITATMLWFVWRYDHRRN--PVATEIPGSVLAET 60 Query: 91 VVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV 150 +P LI++ L W AL + + V + W W F YP ++V Sbjct: 61 AWTLIPTLIVMALFYYGWAGYKALRTV-----PADALEVGVKARMWSWIFEYPNGKRSSV 115 Query: 151 NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASY 210 + PA PV +TS V++S +IP ++ + GMQT + PG +D + A Y Sbjct: 116 --LYVPAGKPVKLDMTSVDVIHSLYIPAFRIKMDTVPGMQTYAWFKTDGPGEFDILCAEY 173 Query: 211 SGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVK 270 G + M A + F +W+ ++ + + + Sbjct: 174 CGLKHANMLSVVKAV-EPDEFRKWLESSEAPGGKGRALLDAYGCISCHSLDGSPGPGTTF 232 Query: 271 PDLFAD 276 L+ Sbjct: 233 KGLYGA 238 >UniRef50_C8SJH9 Cytochrome c oxidase, subunit II n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SJH9_9RHIZ Length = 355 Score = 214 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 15/252 (5%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAI 59 R+R G L++ G+ LL GC + LDP G+ L T F +L VV Sbjct: 96 RVRSPL--AGPLAVIVGSALLPGCAGVQSALDPHGEQADTLAVLFWT-FMAVLGVVWLVT 152 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW----TVPILIIIFLAVLTWKTTHALE 115 + + A +R ++ + + + T +I+ LA+L++ A+ Sbjct: 153 MAGLLLALTHRRDSRGEPAEGARPAVKRPMLIAFAAMLTSTTIILSGLALLSFGGQRAIF 212 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYP-EQGIATVNEIAFPANTPVYFKVTSNSVMNSF 174 + I V W W Y G T NEI P +PV K+ + V++SF Sbjct: 213 A----DGAAGALAISVTGHQWWWQVRYEGNDGFETANEIRIPVGSPVDIKLATADVIHSF 268 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 +IP L ++ + G L + A++PG Y G A + G + M +A + F +W Sbjct: 269 WIPSLAGKLDLIPGKSNELRIEASKPGIYRGQCAEFCGQQHAHMAIFVVAL-EPNDFQRW 327 Query: 235 VAKAKQSPNTMS 246 A + + Sbjct: 328 RAGQAAAAKPVD 339 >UniRef50_C1ZF25 Cytochrome c oxidase, subunit II n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZF25_PLALI Length = 330 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 111/282 (39%), Gaps = 18/282 (6%) Query: 12 WLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 WLS FA + + + S+ L +P E L + F L + + + + FA KY Sbjct: 2 WLSKFAVSFVPAQLTSSYWLPEPNSTFAPEVDGLFMFIFWLSVFFFVLIVGLGTYFALKY 61 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R P+ SH+ +EA +P +I + W ++ P E + Sbjct: 62 RRVGTTEVVVPSSSHNTALEATWSLIPTALIFVIF--GWGFVGFVDMRTP---PENAYEV 116 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 +V + W W F YP G +++ P + P +TS+ V++S FIP +++ + G Sbjct: 117 QVNAKKWAWNFTYP--GGLQDSDLHLPVDQPTILTMTSDDVIHSLFIPAFRAKMDVVPGR 174 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 +L + G Y G SGM K + ++ +A+ +++ + M D A Sbjct: 175 YNKLWFHPTKTGENVLFCTEYCGREHSGMNRKVF-VYEEGGVEKKLAEIQETMDKM-DPA 232 Query: 250 AFEKLA----APSEYNQVEYFSNVKP---DLFADVINKFMAH 284 K+ + + ++ V P LF + Sbjct: 233 ELGKITFTKSGCMQCHSIDGSKKVGPSFLGLFGTTHDITTGE 274 >UniRef50_Q0BPU5 Cytochrome c oxidase subunit 2 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPU5_GRABC Length = 300 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 29/242 (11%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW 93 G + SL ++ +V+ + A YR S K SH +E Sbjct: 58 GPLKERIDSLHDLIMVIITAIVVFVAALLGWCA--YRFSAKRNPVPSRTSHHTWLEIAWT 115 Query: 94 TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV--- 150 +P LI+ +A+ +++ + + + +T++V + W W + YP+ GI ++ Sbjct: 116 LIPALILAVIAIPSFRLVYYEDRTH-----NPDVTLKVTAHQWYWEYGYPDNGIDSIESR 170 Query: 151 ------------------NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTR 192 N++ P V VTS V++SFFIP LG Q YA+ G Sbjct: 171 VIQDGDLKPDQIRLLSVDNQVVVPYGKNVRVLVTSADVIHSFFIPSLGVQRYAIPGRTIE 230 Query: 193 LHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE 252 ++PG Y G G S M A F +W K ++++ A + Sbjct: 231 TWFRVDKPGVYYGECNQICGAFHSQMPIAVKAV-SPEEFQKWAESQKTKKTSLNNTPAGQ 289 Query: 253 KL 254 + Sbjct: 290 TI 291 >UniRef50_Q3A1J0 Cytochrome c oxidase subunit 2 n=2 Tax=Desulfuromonadales RepID=Q3A1J0_PELCD Length = 318 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 100/259 (38%), Gaps = 12/259 (4%) Query: 35 QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT 94 + L FG+ LI+++ + V FA ++ S S + WT Sbjct: 7 DTAEAVDKVFLYIFGISLILLVLITGVMVAFAIRFHRSR--QPQPKEIPSSCLWLEITWT 64 Query: 95 -VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEI 153 +P LI++ + W+ +L P + ++ V+ W W F+YP G T E+ Sbjct: 65 LIPTLIVLSMFWYGWQGYLSLTNVPP-----DALPVKAVARQWSWSFVYP--GGRTSPEL 117 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 PA PV + S V++S +IP + A+ GM T + A E GT+D Y G Sbjct: 118 VVPAGRPVRIAIVSEDVLHSLYIPAFRIKKDAVPGMTTHVWFRAPETGTFDLFCTEYCGL 177 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDL 273 + M ++ AF W+ K + E+ + ++ V P Sbjct: 178 AHASM-ITSVEVLSPDAFADWLQKPQPEAGLAKGRQLLEQY-GCLACHSLDDSPRVGPSF 235 Query: 274 FADVINKFMAHGKSMDMTQ 292 V + A + D +Q Sbjct: 236 AQLVEGQKRAFAQPPDTSQ 254 >UniRef50_Q5P900 Chain II protein of putative cytochrome c oxidase n=2 Tax=Proteobacteria RepID=Q5P900_AZOSE Length = 279 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 20/257 (7%) Query: 1 MRLRKYNKSLGWLSLFAGTVL---LSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVV 55 M +R + + + L+ C ++LDP G + L + +V+ Sbjct: 1 MPMRSAPAAALAVQSVLPVLAVPWLAACEGPQSILDPAGPAARDVTLLWWPMLIVATLVL 60 Query: 56 IPAILMAVGFAWKYRAS----NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT 111 + + + + R N+ + S W + + +P I+ L Sbjct: 61 VGVTVAWIVAMLR-RPRDFSPNEAKRISRRWVVNGGIL-----LPTASIVLLLGFGVPAA 114 Query: 112 HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVM 171 + P + DE P+ I+V W+W YP G V+E+ PA PV+ VTS V+ Sbjct: 115 DRMLPRR----DEAPLRIDVTGRQWQWDVAYPGGGAVLVDELHLPAGRPVHLHVTSADVI 170 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF 231 +SF++PRLG +I A+ G L L A+E G+ G + + G G + M K A F Sbjct: 171 HSFWVPRLGPKIDAVPGRTNVLRLQADEAGSLRGQCSEFCGTGHAHMVLKVQVH-SEADF 229 Query: 232 DQWVAKAKQSPNTMSDM 248 W+A+ + D+ Sbjct: 230 SAWLAERTATAPAGGDV 246 >UniRef50_UPI0000510271 cytochrome C oxidase subunit II n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510271 Length = 290 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 96/284 (33%), Gaps = 30/284 (10%) Query: 4 RKYNKSLGWLSLFAGTVLLSGCNSALLD----PKGQIGLEQR-----SLILTAFGLMLIV 54 R + K LG L A LLSGC + P G SL A+ +LIV Sbjct: 11 RSWAKRLGTLGAVAVLALLSGCTKEQVSTGFFPAESKGATNHTEAYTSLWNGAWIALLIV 70 Query: 55 VIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL 114 + + + YR D +S +E + P+++++ + + Sbjct: 71 GLIVWGLILWSMVAYRRRKNDRGLPVQLRYSMPIEILFTVTPVILVLGFFFQSVQVMEKT 130 Query: 115 EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI----------------ATVNEIAFPAN 158 IEV + W W F Y Q + + P + Sbjct: 131 TD----DTTPGEQVIEVAAKQWAWDFNYVNQDVYFAGTQVPLDGSEKPGEEAPTLYLPVD 186 Query: 159 TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM 218 T + K+ S V++SF++P + + G LHL A + G Y G A G S M Sbjct: 187 TDLEIKLRSRDVIHSFWVPAFLEKRDMIPGHDQSLHLRAEKEGEYVGKCAELCGEYHSEM 246 Query: 219 KFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQ 262 F +A F+ + N +++ P E + Sbjct: 247 LFNVKVV-SKAEFEDYTKSLADEGNKGQLGPEYDRNWYPKEGAE 289 >UniRef50_Q2W5A1 Cytochrome c oxidase subunit 2 n=3 Tax=Magnetospirillum RepID=Q2W5A1_MAGSA Length = 293 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 28/233 (12%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW 93 SL G+++++ + + + ++RA WSH+ +E V Sbjct: 51 SPTMERITSLATFINGVIVVITLLVSGLLLYACTRFRADRNPK--PATWSHNTPLEVVWT 108 Query: 94 TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG------- 146 +P +I++ +A+ +++ + ++ + +T+++V W W + YP+ Sbjct: 109 AIPAVILLLIAIPSFRLLYFMDRVH-----DADMTLKIVGHQWYWTYEYPDHDFKFDSNM 163 Query: 147 -------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 + N + PA P+ ++T++ V++S+ +P G + A+ G Sbjct: 164 VQAEDLKPGQPRLLTADNTLVVPAGVPIRLQMTADDVIHSWSVPAFGIKTDAVPGRLNET 223 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 + NEPGTY G + G M A P + F WVA+AK++ + Sbjct: 224 WVQVNEPGTYYGQCSQLCGVNHGFMPVHVKAVP-KEEFLAWVAQAKKTYAHLD 275 >UniRef50_A9VZ92 Cytochrome c oxidase, subunit II n=9 Tax=Alphaproteobacteria RepID=A9VZ92_METEP Length = 362 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 9/214 (4%) Query: 27 SALLDP--KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 A L P + ++ + + +V+ + + + FA ++R + + Sbjct: 7 PAFLRPESASVQAAKVDTIFVGLLLISSAIVLLVVGLILTFAIRFRRGSPAKRGEMPSVV 66 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 S + E + WT L I F+ + W + + P + I I VV W W P Sbjct: 67 SREFE-IGWTAATLFI-FVFIFWWAASVEIVAFSP---PKDAIEIHVVGKQWMWKTQGP- 120 Query: 145 QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYD 204 G +NE+ P PV +TS V++SF++P + A+ QT A + GTY Sbjct: 121 SGTREINELHVPVGAPVRLLLTSQDVIHSFYVPAFRLKRDALPYQQTETWFQATKTGTYH 180 Query: 205 GISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 + Y G S M + I + + QW+ + Sbjct: 181 LLCTEYCGTDHSRMLGRVIVM-EPQDYAQWLTRQ 213 >UniRef50_B2JCA5 Cytochrome c oxidase subunit 2 n=109 Tax=Proteobacteria RepID=B2JCA5_BURP8 Length = 557 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 101/291 (34%), Gaps = 44/291 (15%) Query: 14 SLFAGTVLLSGCNSA--------LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 LFAG L G + L P +I E SL F L+L VI + V F Sbjct: 25 LLFAGAALAVGDSPGGPRVNEINLQPPVTRIAEELYSL--HTFMLILCTVIFIGVFGVMF 82 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 + + N+ S VE + VP +I++ +A+ KT A++ Sbjct: 83 YSIFAHRKSKGYKAANFHESTTVEIIWTVVPFIIVVLMALPATKTVVAMK-----DTTNA 137 Query: 126 PITIEVVSMDWKWFFIY---PEQGI-------------------------ATVNEIAFPA 157 +T++V WKW + Y P +GI N + P Sbjct: 138 DLTVKVTGYQWKWAYDYVKGPGEGINFFSTLTTPRAEVDGRQPITDTYLQEVDNPLVVPV 197 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 N + T+N V++S+++P G + A+ G A + GTY G G + Sbjct: 198 NKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFRAEKVGTYRGFCTELCGKEHAF 257 Query: 218 MKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSN 268 M + + +WV K+ D A + +S Sbjct: 258 MPV-VVNVLSDEDYAKWVDDQKKKMAAGQDDPNKNYTLAELMERGGKVYSA 307 >UniRef50_UPI0001C164F8 cytochrome C oxidase subunit II, transmembrane region protein n=2 Tax=Nostocaceae RepID=UPI0001C164F8 Length = 338 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 128/335 (38%), Gaps = 69/335 (20%) Query: 12 WLSLFAGTVLLS----GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA----V 63 W L + L+ G N LL ++ LI F ML V I L+ + Sbjct: 8 WTLLIGIALTLTSLWYGQNHGLLPAA---AADEAVLIDGLFDAMLTVSIGIFLLVEGILI 64 Query: 64 GFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTW--------------- 108 +KYR D + P + +E + +P +I++ ++V ++ Sbjct: 65 YSVFKYRRRAGDNEDGPAIEGNIPLEILWTAIPAVIVLGISVYSFDVYNQIGGLDPHGGH 124 Query: 109 --------------------------KTTHALEPSKPLA--------HDEKPITIEVVSM 134 ++ H + P+ ++ KP+ +EV ++ Sbjct: 125 DAPIMEEARVMPGTAIAATLSDKPVNRSVHHQDSPAPMEIAQAEIASNEAKPLVVEVSAL 184 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 + W F YP+ GI T EI P V K+T+N V+++F++P + + G +TR+ Sbjct: 185 QYAWIFTYPDAGITT-GEIHVPVGQQVQMKMTANDVIHAFWVPEFRLKQDVIPGRETRVR 243 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA-KQSPNTMSDMAAFEK 253 + GTY + A GP M+ + I +A FD WV + T++ A Sbjct: 244 FTPKKEGTYTVVCAELCGPYHGAMQTQVIVESKQA-FDAWVQEQLLAEKETINQAIALN- 301 Query: 254 LAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM 288 PS + E+ + + + + + GK + Sbjct: 302 ---PSAMSADEFLAPYMQKM--HIHPETLGIGKVL 331 >UniRef50_C6B8H8 Cytochrome c oxidase, subunit II n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B8H8_RHILS Length = 318 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 9/228 (3%) Query: 39 EQRSLILTAF-GLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI 97 +Q + AF L+L + P ++ + FA KYR + P + + W++ + Sbjct: 18 QQVDIFAIAFSALILAMAGPVFILIIVFAIKYRRGKPANRVHPP--KRDLRLELSWSI-L 74 Query: 98 LIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPA 157 + L W T P A + I+VV+ W W F +PE G +NE+ P Sbjct: 75 PSLCLLGFFGWSTALFATRYFPPA---NALDIDVVAKQWMWKFQHPE-GQGEINELHVPV 130 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 + PV + S V++S F+P L + + G T + ++ GT+ A + G S Sbjct: 131 DQPVKLTMASQDVIHSLFVPALRLKQDVVPGRYTVMWFTPDKVGTFRLTCAEFCGTDHSE 190 Query: 218 MKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEY 265 M + I T A + +W+++ + AA + S + Sbjct: 191 MGGQIIVT-THAQYSRWLSRFSVDQTLAAAGAALFRSHGCSGCHDPSA 237 >UniRef50_A8IDL7 Cytochrome c oxidase subunit 2 n=29 Tax=Alphaproteobacteria RepID=A8IDL7_AZOC5 Length = 313 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 63/272 (23%), Positives = 107/272 (39%), Gaps = 40/272 (14%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNS---------ALLDPKGQIGLEQRSLILTAFGLM 51 M LR+ S + G L + L + RS ++ Sbjct: 32 MSLRRAGALAVAASCWMGLSLAAAHAGLGQPSDWQMNLQQAATPVMESIRSFNTFLLVII 91 Query: 52 LIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKT 110 +V+ +++ ++ N+ A P+ + N + V WTV P++I++ +A+ +++ Sbjct: 92 SSIVLFVLVLLAICIVRF---NEKANPVPSKTTHNTLLEVAWTVVPVMILVAIAIPSFRL 148 Query: 111 THALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG---------------------IAT 149 H LE P E +T++V W W + YP+ G +A Sbjct: 149 LH-LELHTP----EPDMTVKVTGHQWYWSYEYPDNGGFGFDSLMVAEKDLKPGQPRLLAV 203 Query: 150 VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 NE+ P N V VTS V++SF +P G +I A+ G A + G Y G + Sbjct: 204 DNEVVVPVNKVVRIHVTSADVIHSFAVPSFGVKIDAIPGRLNESWFKATKEGVYYGQCSE 263 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 G + M + FD W+A+AKQ Sbjct: 264 LCGRDHAFMPLAVRVV-SQQDFDAWLAQAKQK 294 >UniRef50_A7H8L3 Cytochrome c oxidase subunit II n=7 Tax=Cystobacterineae RepID=A7H8L3_ANADF Length = 351 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 8/215 (3%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 + L +I L A+ F +YR + +P+ + EA+ Sbjct: 15 ASDYARQVDGLHYFIIATTMIAAAGVFLTAIFFFVRYRRRTG-SDVTPHVAPRGIHEALF 73 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 VP+ + + + + L+ + + + V W W F Y G ++++ Sbjct: 74 VGVPLALFLVWFAIGFPQYVKLQLP-----PKDAMDVFVQGKKWMWKFAYAG-GPSSIDT 127 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + PA PV +TS V++SF++P L ++ A+ G T+ A + G Y+ Y G Sbjct: 128 LRVPAGRPVRLLITSRDVIHSFYVPALRVKMDALPGRYTQTWFQAEKAGRYEIFCTEYCG 187 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD 247 G S M + + P + FD W+A+ ++ ++ Sbjct: 188 LGHSAMLGELVVMP-QEEFDVWIAEQRRGAAAVAQ 221 >UniRef50_B0UJY9 Cytochrome c oxidase, subunit II n=6 Tax=Rhizobiales RepID=B0UJY9_METS4 Length = 338 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 97/262 (37%), Gaps = 22/262 (8%) Query: 27 SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS--PNWSH 84 + LDP + L F +L + A+++A+ +++ R + + P Sbjct: 26 QSPLDPVSPQARDLLWLFWL-FSAVLAAIWLAVMLALLASFRARRAETADPLAIDPRRER 84 Query: 85 SNKVEAVVWTVPI-LIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY- 142 TV L+++ L L++ L + +TI V+ W W Y Sbjct: 85 RATALVAGLTVATGLVVLVLTGLSYAGQRRL-----FGDEAARVTIRVIGHQWWWEVQYE 139 Query: 143 ---PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 P +G T NEI P PV + S V++SF++P L + + G +H A Sbjct: 140 DPEPSRGFTTANEIHVPVGVPVRLTLDSTDVIHSFWVPSLTGKQDLIPGRTNAIHFTAER 199 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS-PNTMSDMAAFEK----- 253 PG Y G A + G + M IA D +FD+W P SD A + Sbjct: 200 PGLYRGQCAEFCGMQHAKMGLLVIAE-DEESFDRWRRGQAAPRPEPGSDEARAGEAAFVA 258 Query: 254 --LAAPSEYNQVEYFSNVKPDL 273 + + P+L Sbjct: 259 APCSLCHQVRGTAAAGRNGPEL 280 >UniRef50_C6B875 Cytochrome c oxidase, subunit II n=4 Tax=Rhizobiales RepID=C6B875_RHILS Length = 330 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 66/271 (24%), Positives = 101/271 (37%), Gaps = 23/271 (8%) Query: 17 AGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNK 74 ++ LSGC + LD G + LI+ + +V + +L+ + R Sbjct: 11 LASLCLSGCTGSQSALDAAGASASALKQLIVVIVVVCAVVWLLVMLVLAWSLLRPRDGRG 70 Query: 75 DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 A II L ++++ TT + E +T+ V Sbjct: 71 VAGNDQKARKVVAGAVAA---TAFIIAGLTIISFYTTRKI-----GEASETALTVTVRGQ 122 Query: 135 DWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 W W FIYP+ G T NE+ P V ++ S V++SF++P L ++ + G Sbjct: 123 QWWWQFIYPDDGSGREFKTANELHIPVGQAVKLRLESADVIHSFWVPSLAGKLDLIPGRI 182 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS--PNTMSDM 248 L L A+ PG Y G A Y G S M IA D ++ QWV ++ P + Sbjct: 183 NELTLHADRPGIYRGQCAEYCGLQHSHMAVLVIAE-DEVSYRQWVQGQQRERLPPADPQV 241 Query: 249 AAFEK------LAAPSEYNQVEYFSNVKPDL 273 A E AA PDL Sbjct: 242 TAGETVFMSKPCAACHTIRGTSAAGVTGPDL 272 >UniRef50_Q3JAA7 Cytochrome c oxidase, subunit II n=3 Tax=Bacteria RepID=Q3JAA7_NITOC Length = 352 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 103/290 (35%), Gaps = 29/290 (10%) Query: 2 RLRKYNKSLG--WLSLFAGTVLLS--GCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVV 55 R+R L F G +L GC + L+P G+ + L + ++ Sbjct: 15 RIRSIRHLLRGNISGAFLGASVLGIMGCEGPQSALNPAGRGAEQIAQLFWWLVAVNTLIW 74 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 I + +AV A + + K+ + V I++ LT+ + L Sbjct: 75 ILVVGLAVYAA--------QLRPGAHPHRRAKLLIIGGGVIFPILVLTIYLTYGLS--LM 124 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVM 171 P+ D + I V W W Y I NEI P V + S V+ Sbjct: 125 PALLKPADSDDLQIAVSGEQWWWRVRYLSSSGGEVIELANEIRLPLGESVNLLLDSPDVI 184 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF 231 +SF++P L ++ + G +RL L A + G Y G+ A Y G + MK + AF Sbjct: 185 HSFWVPSLTGKMDMIPGRISRLTLKATKVGVYHGVCAEYCGSAHALMKLDVVVM-TPDAF 243 Query: 232 DQWVAKAKQSPNTMSDMAA--------FEKLAAPSEYNQVEYFSNVKPDL 273 W+A Q A FE +A V PDL Sbjct: 244 AAWLAAQGQPAAVPQQALAARGQELFQFEGCSACHTIRGTAADGQVGPDL 293 >UniRef50_A9WMK9 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococcaceae RepID=A9WMK9_RENSM Length = 310 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 103/284 (36%), Gaps = 37/284 (13%) Query: 2 RLRKYNKSLGWLSL----FAGTVLLSGCNSALLDPKGQIGLE-------QRSLILTAFGL 50 + R ++ L++ A ++LS C + + + L + ++ Sbjct: 24 QHRTGSRRARILTVSAVGVASALVLSACTPEMKNGWLPTERDTTNHTGTIIDLWVNSWIA 83 Query: 51 MLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKT 110 L V I + + YR Y S + +E T+P+ +++ T + Sbjct: 84 ALAVGIITWGLIIWCIIAYRRRKDTVGYPRQMSANLPLEVFYLTIPLFMVLVFFYFTDRD 143 Query: 111 THALEPSKPLAHDEKPITIEVVSMDWKWFFIY-----------------PEQGIATVNE- 152 +++ P + I+V W W F Y P G E Sbjct: 144 QQSVDARDP----NPQVKIDVRGKQWAWDFNYLAGNDISESVYEATTQTPLNGQPIDKEK 199 Query: 153 ---IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 + P N V F++ S V++SF++P + + G + L GT+DG A Sbjct: 200 LPTLYLPINQSVEFQLNSRDVIHSFWVPAFLQKRDMIPGKTNYITLTPKALGTFDGKCAE 259 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 G S M F+ ++ F +AK KQ+ NT + +++ Sbjct: 260 LCGEYHSEMLFRVKVVTEQ-EFQDHLAKLKQAGNTGTLGNEYDR 302 >UniRef50_Q0VNA0 Cytochrome c oxidase subunit 2 n=2 Tax=Alcanivorax RepID=Q0VNA0_ALCBS Length = 402 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 112/323 (34%), Gaps = 66/323 (20%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPK-GQIGLEQRSLILTAFGLMLIVVIPAIL- 60 + L L + T + LD + G Q L L ++ VI ++ Sbjct: 6 FHRAAVGLTSLMISGMTFASDWTERSDLDLRPGVTQASQDVQDLHTTVLWIVTVIGLMVC 65 Query: 61 -MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPSK 118 + + ++R S +P+ H N V+WTV P +I+I +AV + L+ Sbjct: 66 GLILFSMIRHRRSKN---PNPSTFHENVFFEVLWTVIPFVILIAMAVPATRVLVQLD--- 119 Query: 119 PLAHDEKPITIEVVSMDWKWFFIY--------------------PEQ------------- 145 E +T++V WKW + Y PEQ Sbjct: 120 --DTAESELTVKVTGYRWKWSYEYLTYEDDNDIGVSFFSNLATPPEQYNNPVLSGGLFPY 177 Query: 146 ------------------GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 + N++ P+ V F VTS+ V++SF++P G + A+ Sbjct: 178 GTAKELVGKEAPEKDHNYNLEVDNKLLIPSGQKVRFLVTSDDVIHSFWVPDFGGKKDAIP 237 Query: 188 GMQTRLH-LIAN-EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 G L+ + GTY G A G + M + F W+A+ K+ + Sbjct: 238 GFVNETWALVPEGKEGTYYGQCAELCGKNHAFMPIAVEVV-TQDEFKAWIAEEKEKAASG 296 Query: 246 SDMAAFEKLAAPSEYNQVEYFSN 268 D+ F + E + Y Sbjct: 297 PDLTPFADIDQAMEEGKQVYAGA 319 >UniRef50_D2X915 Cytochrome c oxidase subunit II n=1 Tax=Sorangium cellulosum RepID=D2X915_SORCE Length = 387 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 109/296 (36%), Gaps = 21/296 (7%) Query: 15 LFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNK 74 L + L G I + L + + L A +YR + Sbjct: 5 LLRKLLFLPGQ-------WSTIAFDIDKLHYFVISVTMAGATLVALFAAYLMIRYRRRQR 57 Query: 75 DAKYS-PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVS 133 D + P + + V V LI++FL W + ++ P+ + V Sbjct: 58 DVEGPFPGATARPPLLLEVGMVLGLIVLFL---VWWVIGMRQYAELRVAPADPVVVYVTG 114 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 W W F YPE G ++V + PA PV +TS V++SFF+P + + G T L Sbjct: 115 KQWMWKFAYPE-GPSSVATLYVPARRPVKLVMTSRDVIHSFFVPDFRIKYDVVPGRYTTL 173 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 A PG Y + Y G S M+ + IA + + F +W+++ + + Sbjct: 174 WFEATAPGAYQILCTEYCGTNHSTMRGEVIAL-EPSDFARWLSERGRGAGIAGQ--EYTP 230 Query: 254 LAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMS 309 + P E E S V+ L ++ A + P+G G+ MS Sbjct: 231 PSTPGEGIPREPLSLVR--LGENI----AAEEGCLRCHTPDGTPHIGPTWAGLYMS 280 >UniRef50_A6C0L0 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomyces RepID=A6C0L0_9PLAN Length = 277 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 21/238 (8%) Query: 31 DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEA 90 +G+ SL + +V + + V W+ S + + H N Sbjct: 36 QAASNLGIRIDSLFYLILAITALVFVGTQAVLVYALWR---SANNRDERAQYIHGNHKLE 92 Query: 91 VVWTV-PILIIIFLAVLTWKTT--HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG- 146 ++W++ P I++FLA+ + P A + P+ EV + ++W F YP G Sbjct: 93 LIWSIIPGAILLFLALYQMNLWADFRFKNHYPEAAVKDPLA-EVTARQFEWRFRYPAIGK 151 Query: 147 ----------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 + TVNE+ P PV ++ S+ V +SFF+P L + A+ G+Q + Sbjct: 152 QLQPKPQPDDLYTVNELHVPFGKPVLIQLRSDDVQHSFFLPALRIKQDALPGLQIPVWFE 211 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK--AKQSPNTMSDMAAFE 252 AN+PG YD + A G G MK I P+ A + ++ +QS + + +AA E Sbjct: 212 ANKPGVYDLVCAELCGWGHYKMKAHVIVQPE-AEYQAYLKNLTQQQSYDGLGKIAANE 268 >UniRef50_B4DA33 Cytochrome c oxidase subunit 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA33_9BACT Length = 317 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 89/248 (35%), Gaps = 11/248 (4%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 I E +L L I+ I + F +YR + + + + Sbjct: 14 ASDIAREVDALFYGLLVLCGIIAIGVCAAVIVFCLRYRQGSNATRQAEQ---KTIPLEIT 70 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 W+ I ++IF+A+ W SKP + I VV W W +P G +NE Sbjct: 71 WS-AIPLVIFIALFIWAGAVYFHMSKP---PDNATEIHVVGKQWMWKIQHP-TGRREINE 125 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 I N PV +TS V++ F+P ++ + G T + G Y A Y G Sbjct: 126 IHLLINQPVKLLMTSQDVIHDVFVPAFRTKQDVLPGRYTIEWFTPIKTGDYHLFCAEYCG 185 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP- 271 G S M A+ +W+A + + ++ A + + + + P Sbjct: 186 DGHSRMGGWVHVMA-PDAYAKWLADTSTTESVVAAGARLFQARGCAGCHGPNATVHAPPL 244 Query: 272 -DLFADVI 278 +F + Sbjct: 245 NGIFGHPV 252 >UniRef50_Q11EK7 Cytochrome c oxidase, subunit II n=3 Tax=Rhizobiales RepID=Q11EK7_MESSB Length = 330 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 114/281 (40%), Gaps = 25/281 (8%) Query: 7 NKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 + G + L + LSGC+ + L P G L L TA G+ + V + +++ Sbjct: 2 RRGAGRVVLLSIASALSGCSGVQSALSPSGVEALRIDPLFWTATGVSVAVTLMVVVLMAL 61 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILI-IIFLAVLTWKTTHALEPSKPLAHD 123 + P W + V+ +++ I+ L L ++ + Sbjct: 62 ALY----------GPPRWRSWLGGDRVIIGGGVVLPIVVLTGLFIYGLFVMQAGAVRSAR 111 Query: 124 EKPITIEVVSMDWKWFFIY--PE-QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 E T+ ++ W W +Y P+ + I + NE+ PA PV ++ S++V++SF+ P++ Sbjct: 112 EGEATVTIIGKLWWWEVVYQGPDGEEIVSANELRLPAGRPVRLRLESDNVIHSFWAPQIA 171 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA-KAK 239 ++ + G + + A PG G A Y G + M F +A +D W+A +A Sbjct: 172 GKLDMIPGRTNEVVVEATAPGISRGQCAEYCGGAHALMAFYVVAMA-PDEYDAWLAREAG 230 Query: 240 QSPNTMSDMAAF-------EKLAAPSEYNQVEYFSNVKPDL 273 +P +++ A + E + PDL Sbjct: 231 PAPEPLTEGEARGRQVFLENGCGGCHQVRGTEARGRIGPDL 271 >UniRef50_Q46SU8 Cytochrome c oxidase, subunit II:Cytochrome c, class I:Cytochrome C oxidase subunit II, transmembrane region n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46SU8_RALEJ Length = 316 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 88/230 (38%), Gaps = 11/230 (4%) Query: 37 GLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVP 96 +L+L+ L+ +V + ++ G +Y + P + NK + WT Sbjct: 16 AGRYDTLMLSLTALLCVVALAVLVAIAGSVIRYHEHRPADRSHPPLA--NKPLEIAWTT- 72 Query: 97 ILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFP 156 I +++FL + W ++ A + + VV+ W W + G +NE+ P Sbjct: 73 IPLLVFLGIFAWAAHDYTLLAQETAG---ALPVTVVARQWMWKLEHAN-GKREINELHVP 128 Query: 157 ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 V +TS V++SF++P + + G T L A G Y A Y G + Sbjct: 129 LGQAVQLTMTSQDVIHSFYVPAFRIKQDVVPGRYTTLRFTATHAGVYRLFCAEYCGTDHA 188 Query: 217 GMKFKAIATPDRAAFDQWV-AKAKQSPNTMSDMAAFE--KLAAPSEYNQV 263 M+ + + P A F +W+ A A F AA + Sbjct: 189 AMQGRIVVMP-PAEFARWLDADVGPETTAARGRALFRHYGCAACHDAGAT 237 >UniRef50_Q089E4 Cytochrome c oxidase subunit 2 n=102 Tax=cellular organisms RepID=Q089E4_SHEFN Length = 528 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 111/322 (34%), Gaps = 54/322 (16%) Query: 13 LSLFAGTVLLSGCNSALLDPKG--QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 L + + L L +G I + L +T + ++ + + + +R Sbjct: 8 LLVVFVALPLGATEMPLNMTQGVTDISGKVYDLHMTILYICCVIGLVVFGIMIYSMIYHR 67 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIE 130 S + N+ S KVE +P +I+I +A+ KT A+E + +TI+ Sbjct: 68 KSKGA--VAANFHESTKVEIAWTVIPFIILIGMAIPATKTLIAME-----DPSDADLTIK 120 Query: 131 VVSMDWKWFFIYPEQGIATVNEI-------------------------AFPANTPVYFKV 165 + WKW + Y ++ I + + P N V F + Sbjct: 121 ITGSQWKWHYSYFDKDIEFYSTLSTPRAQIDGSEAKGEHYLLEVDKPLVLPINQKVRFLM 180 Query: 166 TSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIAT 225 TS+ V++S+++P + A G ++PG Y G A G M A Sbjct: 181 TSDDVIHSWWVPAFAVKKDANPGFINESWTRIDKPGIYRGQCAELCGKDHGFMPIVVQAL 240 Query: 226 PDRAAFDQWVAKAKQ-----------------SPNTMSDMAAFEKLAAPSEYNQVEYFSN 268 A FD W+ + KQ S ++ +A + +Q Sbjct: 241 -SEADFDNWLVEQKQLASNAAAAAAASMSKTLSLEELTSQGEQIYIARCAACHQPNGAGL 299 Query: 269 VKPDLFADVINKFMAHGKSMDM 290 P +F +I + G D Sbjct: 300 --PGVFPSLIGSPIIKGPVEDH 319 >UniRef50_Q1YUZ5 Cytochrome c oxidase subunit 2 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUZ5_9GAMM Length = 381 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 113/326 (34%), Gaps = 42/326 (12%) Query: 16 FAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 AG+ S L P+G + Q + + + + VI + F Y Sbjct: 21 IAGSAFAESSASQLNMPQGVTEVSQAAYDIHMIMIWVCTVIGVGVFGFMFYVMYAHRKSR 80 Query: 76 AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMD 135 + N+ VE + VP +I+I +A + D I I++ Sbjct: 81 GAVAENFHEHLGVELLWTIVPTIILIVMAFPATTALLKV-----YDTDNPDIEIKITGYQ 135 Query: 136 WKWFFIYPEQGIATVNEI-------------------------AFPANTPVYFKVTSNSV 170 WKW + Y +G+ ++E+ P + F VT N V Sbjct: 136 WKWQYEYLGEGVKFMSELRTSDDEVYGREPKGEHYLREVTEALVLPVGKKIRFLVTGNDV 195 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAA 230 ++S+++P G + A+ G+ T ++PGTY G G G + M A Sbjct: 196 IHSWWVPDFGVKRDAVPGLFTAGWAKTDKPGTYVGECTELCGQGHAFMPVVVEVKE-EAE 254 Query: 231 FDQWVAKAKQS----PNTMSDMAAFEKLAAPSEYNQV-------EYFSNVKPDLFADVIN 279 +++W+A K +T+ A E+L A E + + P +F + Sbjct: 255 YNEWLANKKAEAVEYASTIGKEWAPEELMAKGEEVYLQSCAGCHQADGGGIPGVFPAIKG 314 Query: 280 KFMAHGKSMDMTQPEGEHSAHEGMEG 305 +A G + + M+ Sbjct: 315 SPIALGPQIGHIAVLIDGVPGSAMQS 340 >UniRef50_Q01R98 Cytochrome c oxidase, subunit II n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R98_SOLUE Length = 322 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 19/265 (7%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAK-----YSP 80 N ++ G R L + FGL+L ++ ++ F+ + R + + + Sbjct: 2 NQSMWHASGPNAAYVRELGIF-FGLLLGIIFVIVVGLALFSLRRRHRGIEQEALEGSHQA 60 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 + ++ VV L + L LT + + A + IEV W W Sbjct: 61 SERTDGRLRMVVGIATALTVSILFGLTIVSVSVGKSISASAAPANSLLIEVTGAQWWWKI 120 Query: 141 IY----PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 Y P + I T NEI P PV + T++ V++SF++P L + + G T + Sbjct: 121 RYANDDPSRIIETANEIHIPTGRPVAIRGTADDVIHSFWVPSLQGKRDLIPGRTTLEWMQ 180 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA------ 250 A++PG Y G A + G + M F IA P + F+ W+ Q +D Sbjct: 181 ADQPGEYRGQCAEFCGLQHAHMAFWVIAEPPQ-QFNHWMDHQLQPAIEPADEDTKRGKEI 239 Query: 251 --FEKLAAPSEYNQVEYFSNVKPDL 273 + + PDL Sbjct: 240 FLQSACILCHAIRGTDASAQAGPDL 264 >UniRef50_B4WPA2 Cytochrome c oxidase subunit 2 n=2 Tax=Cyanobacteria RepID=B4WPA2_9SYNE Length = 332 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 30/298 (10%) Query: 2 RLRKYNKSLGWLSLFAGTVLLS---GCN--SALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 R+ + LG SL AG +S G L + L + + I Sbjct: 20 RVLNRRRILGLASLAAGNFAISVWMGQEAYKWLPPQASSEAVLVDKLFSFMTAVGTFIFI 79 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL-- 114 + + RA+ D P + K+E + VPI++II++ +++KT + Sbjct: 80 GVVGTLLYSMIFQRAAKYDNSDGPPIEGNVKLEVIWTAVPIMLIIWIGTVSYKTYDQMSI 139 Query: 115 -----------------EPSKPLAHD----EKPITIEVVSMDWKWFFIYPEQGIATVNEI 153 EP KP+ D + P IEV S W W F YP+Q +++ E+ Sbjct: 140 LGTIAPKVMATVDTVPGEPRKPVPGDISPTDNPAPIEVHSRQWSWEFYYPDQNVSST-EL 198 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 P N FK+TS+ V++ F++P + + G + L G Y + YSG Sbjct: 199 HLPLNQRARFKLTSDDVLHGFYVPAFRVKQDIVPGKEIDFALTPIRAGRYRLRDSEYSGT 258 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 F+ + + + QW+ Q+P ++ A+E+ + + ++ VKP Sbjct: 259 YFASNQTNVVVE-SEEEYQQWLGAIAQNPPQAAENIAYEEFSQAEQGTISLGWATVKP 315 >UniRef50_D2PZ51 Cytochrome c oxidase, subunit II n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZ51_9ACTO Length = 299 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 101/269 (37%), Gaps = 27/269 (10%) Query: 14 SLFAGTVLLSGCNSALLD-------PKG--QIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 ++ T++L+GC++ P+G RSL + A+ LI+ + + + Sbjct: 34 AVVVSTLVLTGCSAETNAQWKRLGLPEGASDRTEAVRSLWIGAWIAALIIGVMVWGLILF 93 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 +YR ++DA ++ +E + P +I L T + + + D Sbjct: 94 AVVRYRRRSEDAPR--QTRYNLPLEVLYTLAPFAVIGVLFFYTVENGNKVTA----MSDS 147 Query: 125 KPITIEVVSMDWKWFFIYPE-----QGIATVN------EIAFPANTPVYFKVTSNSVMNS 173 TI VV W+W F Y E +G+ E+ P N V F++TS V++S Sbjct: 148 PAHTINVVGQQWQWTFNYKETVDGQEGVWETGTLEEPAELVLPVNESVKFELTSPDVIHS 207 Query: 174 FFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 F++P ++ + G L + GT+ G A G S M F + Sbjct: 208 FWVPAFYFKLDVIPGRPNNFELTPTKTGTFAGKCAELCGLYHSRMVFTVRVV-TAEEYQA 266 Query: 234 WVAKAKQSPNTMSDMAAFEKLAAPSEYNQ 262 + + T + + P Q Sbjct: 267 HLRELAAKGQTGAATGGEDATTIPGHGEQ 295 >UniRef50_Q1NHI1 Cytochrome c oxidase, subunit IIc n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHI1_9SPHN Length = 322 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 114/295 (38%), Gaps = 29/295 (9%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 WL + AG L+ CN+ G E R++ A L + I +M V + Sbjct: 5 WFWLLVLAG---LTACNAE-QSTLHVFGAEARAVRQMALLLTIGAAIIVTIMTVLYVRAV 60 Query: 70 RASNKDAKYSPNWSHSNKVEAVVW---TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP 126 RA SH + V+W P LI+ L + +AL +P A Sbjct: 61 RAPEGK------LSHDRGMRMVLWMGAIGPTLILTALLI------YALPAMRPRATAPGD 108 Query: 127 ITIEVVSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 + + V + W Y G + + NE+ P V F++T+ V++SF+IP L + Sbjct: 109 LVVRVDGEQFWWRVAYDPAGDLSPLLSANEVRIPVGRTVVFELTARDVIHSFWIPGLAGK 168 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS- 241 + + G RL + A + G Y G+ A + G + M F IA D FD W+ +++ + Sbjct: 169 MDMIPGRTNRLVVQAEKSGRYRGVCAEFCGLSHALMAFDVIAM-DTTDFDAWLRRSRAAS 227 Query: 242 ----PNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ 292 + + + + + + PDL + M G + Sbjct: 228 AGAIASRGATLFDAHGCGGCHAIRGTSHDARIGPDLSRFGERRTMGAGIMPPTSA 282 >UniRef50_Q1V0P2 Cytochrome c oxidase subunit 2 n=2 Tax=Candidatus Pelagibacter ubique RepID=Q1V0P2_PELUB Length = 271 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 28/214 (13%) Query: 46 TAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAV 105 +++ + + + + + ++RAS +H+ VE + +P LI+I +AV Sbjct: 47 ILLPVIIAISVFVLFLMIYVCIRFRASKNPN--PSKTTHNVAVEVLWTLIPCLILIVMAV 104 Query: 106 LTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI------------------ 147 ++K + + + +TI+ V W W + YP++ I Sbjct: 105 PSFKILYKQDTI-----PKADLTIKAVGYQWYWGYEYPDENIIFESYMIKEAELKENQPR 159 Query: 148 --ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDG 205 NE+ P N V +T+N V++++ +P G + A+ G A + GTY G Sbjct: 160 LLTVDNEVIVPVNKVVKVLITANDVLHAWALPSFGVKRDAVPGRINETWFKAEKVGTYYG 219 Query: 206 ISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 + G + M D + W+A+AK Sbjct: 220 QCSELCGIEHAFMPITVKVVTDE-EYAIWLAEAK 252 >UniRef50_Q7NIL9 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobacter violaceus RepID=Q7NIL9_GLOVI Length = 308 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 101/267 (37%), Gaps = 28/267 (10%) Query: 15 LFAGTVLLSGCNSALLDP--KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 L + +G L P + + L + + + + + A+ ++ + Sbjct: 19 LIVIASVWAGQTVGWLMPVEASKEAGQIDGLFRFMLIIATGIFLGVQGVLLYSAFVFKRA 78 Query: 73 NKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTT-------------------- 111 D PN H N ++WT +P ++++L++ +++ Sbjct: 79 KDDMGDGPNM-HGNLRLEILWTAIPTALVLYLSIYSFEVFQLMGASSPMGGGAHHEDSGL 137 Query: 112 -HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSV 170 + + P P+ I V ++ + W F YP V+E+ P PV + SN V Sbjct: 138 PIRFQATNPDPAAPPPLIIAVEAVQYAWIFSYPGSETQ-VSELHLPIGRPVRMDMKSNDV 196 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAA 230 +++F++P + + G T++ + G Y A G GM I D+ Sbjct: 197 IHAFWVPEFRLKQDVIPGRTTQVSFTPTKAGKYQLRCAELCGAYHGGMVVDVIVE-DKKD 255 Query: 231 FDQWVAKAKQSPNTMSDMAAFEKLAAP 257 D W+ K++ S T + +A AA Sbjct: 256 VDAWL-KSQASLGTSTRVAQLADPAAA 281 >UniRef50_A6GFM7 Cytochrome c oxidase subunit 2 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFM7_9DELT Length = 339 Score = 204 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 97/272 (35%), Gaps = 23/272 (8%) Query: 17 AGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA 76 GT +S LL L + + I + I F WKY+ ++D Sbjct: 11 LGTPPMSDSPWELLPTASNHAQSLDGLYILLTAVTGISFVLVIGTMFYFMWKYKMKSEDD 70 Query: 77 KYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 K SP +H+ K+E +P + ++ V W ++ S P A I I V W Sbjct: 71 KTSP-LTHNGKLEFAWSAIPAIFLMVFFV--WGELDFVKLSSPPA---DSIDIHVTGQKW 124 Query: 137 KWFFIYPEQGIATVNE---------IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 W F YP + +A E + P V +TS V++SF+IP + + Sbjct: 125 YWTFEYPGRPVAATTEVEDGEIAPLLVVPKGQAVRLTMTSKDVIHSFYIPAFRVKKDVVP 184 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA----KQSPN 243 G T + A E G + Y G S M + + + VA A + Sbjct: 185 GRYTYVWFEATELGDFPVFCTEYCGDEHSSM-LAVVRVVEPEDYKAEVAAATTLEQGEGE 243 Query: 244 TMSD--MAAFEKLAAPSEYNQVEYFSNVKPDL 273 ++ ++ A + + + V P Sbjct: 244 SLEQFGEKVYKAFA-CNSCHNTDATRKVGPGF 274 >UniRef50_A9F8S3 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F8S3_SORC5 Length = 362 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 95/269 (35%), Gaps = 27/269 (10%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 + + E L + L+ F +YR +D P+ + + Sbjct: 15 RSSLAREIDGLHYFVILATMGGAALITLIGGYFLIRYRRRLQDTP-RPHPGAFARPALFL 73 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 TV + + FL LT+ T + + + + + V W W F YP G ++ Sbjct: 74 ETVSLFALGFLF-LTFWTIGTRQFADLRTAPDDALDVYVTGKQWMWKFGYPG-GDREISV 131 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + PA+ PV +TS V++SF++P + + G T ANEPG Y + + G Sbjct: 132 LYVPAHRPVRLIMTSRDVIHSFYVPEFRIKQDVIPGRYTTAWFEANEPGAYPILCTEFCG 191 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQS-----------------------PNTMSDMA 249 S M+ + IA D +++W+A S P+ A Sbjct: 192 TSHSEMRGQVIAL-DPVDYERWLAGGLASAPAFAQEAAAEAENELAEAEPTMPSRGERAA 250 Query: 250 AFEKLAAPSEYNQVEYFSNVKPDLFADVI 278 A + + L+ V+ Sbjct: 251 AKHGCLRCHTLDGTPHVGPSWAGLYRAVV 279 >UniRef50_A0KDK6 Cytochrome c, monohaem n=47 Tax=Burkholderia RepID=A0KDK6_BURCH Length = 434 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 98/260 (37%), Gaps = 27/260 (10%) Query: 29 LLDPKGQIGLEQRSLILTAFGL--MLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSN 86 ++ G L L + V I +L+ F + +A + + Sbjct: 129 VVHAAGPAAQPVFVLGWALLALCTFVCVAIAVLLLIALFRRRVQAGGG---------YGS 179 Query: 87 KVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ- 145 + V I I++ L + + P +TI V + DW W YP+ Sbjct: 180 GLTIVTVGTAISILLLFGALVYMLRVLGAVAAPPRPP--TLTITVTAQDWWWAVRYPDDA 237 Query: 146 ---GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 G T NEI P PV ++ S V+++F++P+L + + G R L A+ PG Sbjct: 238 DGRGFVTANEIHIPVGQPVAIELKSADVIHAFWVPQLAGKTQTIPGQTNRQWLQADRPGV 297 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE---------K 253 Y G + Y G + M F+ +A P AAF W+A +Q + A E + Sbjct: 298 YRGQCSQYCGAQHAHMAFEVVAEP-PAAFHAWLAAQRQPAPAPAAGAGAERRGQRVFAAR 356 Query: 254 LAAPSEYNQVEYFSNVKPDL 273 A + + PDL Sbjct: 357 CAGCHAVRGTDAAGDAGPDL 376 >UniRef50_Q3J6Q8 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosococcus oceani RepID=Q3J6Q8_NITOC Length = 281 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 101/269 (37%), Gaps = 42/269 (15%) Query: 6 YNKSLGWLSLFAGT--VLLSGCNSALLD---PKG--QIGLEQRSLILTAFGLMLIVVIPA 58 +N+ + ++ GT L+SG A L +G E L + F + + V I Sbjct: 4 FNRQSLFATIIGGTGLFLVSGNACAELGLNLTRGVTPTSEEIYDLHMLIFWICVGVGILV 63 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPS 117 + + +R S + H N V WTV P+LI+I +AV + Sbjct: 64 YGIMAWSIYHHRKSKGA---VASQFHENLTLEVTWTVIPLLILIAVAVPATSAMVRI--- 117 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQG-------------------------IATVNE 152 +TI+V W+W + Y + + N Sbjct: 118 --YDSSASDLTIKVTGYQWRWHYEYVDHDFGFTSSLSTPFDQIVNKAPKGEHYLLEVDNP 175 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P + V F +T++ V ++F++P G + A+ G + EPG Y G A G Sbjct: 176 LVLPTDKKVRFVITADDVNHAFWVPAFGFKQDAIPGFINEAWAVIQEPGIYRGQCAELCG 235 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 G M + FD+W+A++K + Sbjct: 236 RGHGYMPI-VVEAKTPEEFDKWMAESKAA 263 >UniRef50_Q2YCN0 Cytochrome c oxidase subunit 2 n=4 Tax=Betaproteobacteria RepID=Q2YCN0_NITMU Length = 377 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 105/315 (33%), Gaps = 60/315 (19%) Query: 20 VLLSGCNSALLD---PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA 76 + L+ + L+ P+ I + + L + + + ++R S Sbjct: 21 LALAAADPYQLNLPEPQTVIAQQIYDQHTLVLWICLAIFVGVFGVMFYSVIQHRKSKG-- 78 Query: 77 KYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 + N+ HS VE + +P LI+I +A KT A++ IT++ W Sbjct: 79 YKAANFHHSTTVEIIWTAIPFLILIGMAFPATKTVIAMK-----DTSNPDITVKATGYQW 133 Query: 137 KWFFIY----------------PEQGI------------ATVNEIAFPANTPVYFKVTSN 168 KW + Y P+ I + P V +T+N Sbjct: 134 KWGYDYLTGEGEGIGFLSALATPKAQIENAAPKGENYLLEVDKPLVVPTGKKVRVLITAN 193 Query: 169 SVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDR 228 V++++++P LG + A+ G + +PGTY G A G M A + Sbjct: 194 DVLHAWWVPALGVKQDAIPGFIRDVWFNIEKPGTYRGQCAELCGKEHGFMPIVVEAV-EP 252 Query: 229 AAFDQWVAKAKQSPNTMS---------------DMAAFEK-LAAPSEYNQVEYFSNVKPD 272 + WVA+ K ++ A + AA + N P Sbjct: 253 EKYAAWVAEQKTKLAAVAVDVNKEFGLDELKAKGEAVYNANCAACHQANGQGV-----PG 307 Query: 273 LFADVINKFMAHGKS 287 F + +A G Sbjct: 308 TFPAIAGSKVATGPK 322 >UniRef50_A8TIJ6 Cytochrome c oxidase subunit 2 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIJ6_9PROT Length = 283 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 29/231 (12%) Query: 46 TAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAV 105 ++ ++ + + + V ++RAS +H +E +P++I++ +A+ Sbjct: 58 WLLVIITLITVFVLALLVYVCVRFRASRN--PVPSKTTHHTWLEVAWTGLPVVILVLIAI 115 Query: 106 LTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA----------------- 148 ++K + + + +TI+V + W W + Y +Q +A Sbjct: 116 PSFKLLYYAD-----RAVDPDMTIKVQAHQWYWSYEYLDQQVAFDSNLIPEADLKPGQLR 170 Query: 149 ---TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDG 205 N + P V +TS+ VM+SFF+P G Q+Y+ G ++ G Y G Sbjct: 171 LLEVDNRLVVPVGKKVQVLITSSDVMHSFFMPSFGVQLYSTPGRTNETWFQVDKAGVYYG 230 Query: 206 ISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 G + M A + AA+D W+ +AK + M D AA +LAA Sbjct: 231 QCNQICGVNHAYMPIVVEAM-EPAAYDAWLVQAK-TKFAMDDSAASPRLAA 279 >UniRef50_B1M0S7 Cytochrome c oxidase, subunit II n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M0S7_METRJ Length = 329 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 11/230 (4%) Query: 37 GLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVP 96 E LIL L L++ +P + FA +YR ++ + SP+ SN +E +P Sbjct: 19 ASETDLLILAFTVLTLLLTVPVFVAITYFALRYREGSEADR-SPSGIRSNLIEISWMLIP 77 Query: 97 ILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFP 156 L+ + V W ++ P + +E + W W F +P G + +N + P Sbjct: 78 FLLTLIFFV--WGARLFIQSKNPPP---DAMVVEAIGRQWMWKFQHP-TGQSEINNLHLP 131 Query: 157 ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 P+ + S V+++ ++P + Q+ A+ T L A++ GTY + Y G S Sbjct: 132 IGQPIRLHIISQDVIHALYLPAVRMQVAALPDRYTDLWFKADKVGTYHLYCSEYCGTDHS 191 Query: 217 GMKFKAIATPDRAAFDQWVAKA-KQSPNTMSDMAAFEK--LAAPSEYNQV 263 M + + + W+ A Q + A +E A E Sbjct: 192 VMGGEVTFM-NPGDYQDWLTHAGAQQGKVAAGRALYEAYGCAGCHEPGSP 240 >UniRef50_Q0AMG7 Cytochrome c oxidase subunit 2 n=2 Tax=Hyphomonadaceae RepID=Q0AMG7_MARMM Length = 292 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 110/277 (39%), Gaps = 30/277 (10%) Query: 9 SLGWLSLFAGTVLLSGC--NSAL-LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 +L W + AG G + AL P +E+ + L +I VI ++M + Sbjct: 16 ALTWTTFAAGAFATPGQPTDGALGFQPAVTPIMERITWFHDILLLPMITVITLVVMGLLV 75 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 +R + K SH+ +E V VP+L++I +A+ ++ + + P E Sbjct: 76 FVMFRFNRKANPTPSKNSHNTLLEVVWTAVPVLLLIVIAIPSFPLLYMQDELPP----EI 131 Query: 126 PITIEVVSMDWKWFFIYPEQGIAT-----VNE----------------IAFPANTPVYFK 164 T++ W W + YP+ +A + E + P + V Sbjct: 132 DFTLKATGNQWNWSYEYPDHEVAEYFSNMIEEEDLQPGQLRNLSVDYPLVVPVDATVRVL 191 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA 224 VT+ V++++ +P G+++ A+ G A + G Y G + G + M + Sbjct: 192 VTATDVIHNWAMPAFGTKMDAIPGRINEAWFQATQEGVYYGQCSELCGLRHAFMPIEVHV 251 Query: 225 TPDRAAFDQWV-AKAKQSPNTMSDMAAFEKLAAPSEY 260 P + FD W+ AKA+ + +D E AA Sbjct: 252 VP-QDVFDAWIAAKAEDEYSEAADAIIAEYTAARETR 287 >UniRef50_Q2YBV3 Cytochrome c oxidase, subunit II n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YBV3_NITMU Length = 353 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 107/292 (36%), Gaps = 47/292 (16%) Query: 30 LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVE 89 L G L L+ + + IL+ V + R S+ D+ S K Sbjct: 48 LHSYGPAATPVMHLGWLMTALLSAITLIVILLLVIAIVRKR-SSADSGMIGAESGGLKWV 106 Query: 90 AVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY----PEQ 145 + + I+ L V +A+ + +T+ V DW W Y P + Sbjct: 107 YIGTGISTFILAGLTVHFLTVLNAV----AKPTETPVLTLTVTGYDWWWNIEYEHGDPAK 162 Query: 146 GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDG 205 T NEI P PV K+ S V+++F++P L + + G+ + + A+ PG Y G Sbjct: 163 RFVTANEIHIPVGRPVLLKLKSADVIHAFWVPVLAGKTQMIPGLVNQKWIQADVPGIYAG 222 Query: 206 ISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEY 265 A + G + M + IA DR F++W +++ Sbjct: 223 QCAQFCGAAHAHMNLEVIAESDR-DFEKWQEAQRRTAFP--------------------- 260 Query: 266 FSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH----EGMEGMDMSHAES 313 +++ HG + M + G H+ EG+ G D++H S Sbjct: 261 ------------VSEHNEHGYKLFMDRCGGCHAVRGTEAEGLHGPDLTHLNS 300 >UniRef50_A8LTQ3 Cytochrome c oxidase subunit II n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LTQ3_DINSH Length = 345 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 29/259 (11%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 + + L+P G L + + V + + +A FAW + + +W Sbjct: 46 SQSALEPSGLGAAAAYDLTIGMVVGLGAVFVVVMAIA-WFAW------HSKRPAGHW--- 95 Query: 86 NKVEAVVWTVPILI-IIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 VWT ++ +I ++ + +T AL + A D + IEV + W +Y Sbjct: 96 -----WVWTGGVITPLIAISTVMVASTAALVATTRPAPD--ALVIEVTGYQFWWDVVYDP 148 Query: 145 QG--IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 G + NE+ P PV ++ SN V++SF++P + ++ + G L + A E G Sbjct: 149 DGTPLRDANELILPEGRPVTLRLNSNDVIHSFWVPSISGKMDMIPGRTNTLTITATETGQ 208 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE--------KL 254 + G A + G M F+ P A FD+W+A + + ++ A E Sbjct: 209 FRGQCAEFCGLSHPKMAFEVTVLPPEA-FDKWLATTRGAARDVARPAQAEGREVFLSAGC 267 Query: 255 AAPSEYNQVEYFSNVKPDL 273 AA E V + PDL Sbjct: 268 AACHEIRGVAEGGRLGPDL 286 >UniRef50_B8IHG8 Cytochrome c oxidase, subunit II n=2 Tax=Rhizobiales RepID=B8IHG8_METNO Length = 313 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 90/233 (38%), Gaps = 7/233 (3%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 + + L +++ + + +GF+ +YR + + S + E + Sbjct: 9 ASTLAQRIDVIFAGLLALSGTILLLVLCLLIGFSVRYRRGSAAPRGPMPEVMSREFE-IG 67 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 WT L + F+ + W T+ ++ P + I ++VV+ W W ++ G +NE Sbjct: 68 WTSATLFL-FVFLFWWATSVEIKAFLP---PKDAIEVQVVAKQWMWKTLH-SNGAREINE 122 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P PV + S V++SFF+P + + G A + G + + A Y G Sbjct: 123 LHVPIGVPVRLALRSQDVIHSFFVPAFRLKQDVVPGQLHETWFQATKLGVFHLLCAEYCG 182 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEY 265 S M+ K I + W+A + + + AA S + Sbjct: 183 TDHSRMRGK-IVVMTPEDYAAWLAAQPEGDDLAKEGAALFVERGCSGCHAPSA 234 >UniRef50_D0KXM7 Cytochrome c oxidase subunit 2 n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXM7_HALNC Length = 377 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 104/270 (38%), Gaps = 37/270 (13%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M R G L+ + + + P G Q + L + VVI + Sbjct: 1 MATRLILIVTGLLAPLSSVMAAQEDPLSFNMPVGVTTTSQTAYDLHMLVFWVCVVIGIGV 60 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKP 119 +V AW + + H N V+WT VP LI+I +AV K A Sbjct: 61 FSV-MAWSLVRHRRSRGAVASQFHENTAVEVIWTLVPALILIAIAVPATKAIIAANAQPA 119 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEI-------------------------- 153 + I+V+ WKW + YP +GI+ + + Sbjct: 120 T----PDVVIDVLGSQWKWEYKYPREGISFFSNLASPSRDASQLGAKESPANVPYYLLNV 175 Query: 154 ----AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 P V +VTS+ V++S+++P+LG + A+ G ++ + ++PGTY G A Sbjct: 176 DHPMVVPVGKTVQVQVTSSDVIHSWWVPQLGFKTDAIPGKVNKMSFVIDKPGTYRGQCAE 235 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G G + M A AA+ +W+ K K Sbjct: 236 LCGAGHAFMPIVVEAMM-PAAYAEWMNKEK 264 >UniRef50_B6IRX5 Cytochrome c oxidase subunit 2 n=1 Tax=Rhodospirillum centenum SW RepID=B6IRX5_RHOCS Length = 336 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 112/299 (37%), Gaps = 46/299 (15%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSAL-------------LDPKGQIGLEQRSLILTAFG 49 +R + K + FA LLSG A P + G Sbjct: 1 MRIWPKRRTGVP-FALAALLSGGALAQEPLGQPVDWQMWHQVPATPVMQRLEDFHWMLLG 59 Query: 50 LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTW 108 +M+++ + + + ++ N+ +P+ + N V V WTV P++I+I +A+ ++ Sbjct: 60 IMVLICLLVVALLAYVVVRF---NEKRNPTPSRTSHNTVLEVAWTVIPVVILIAIAIPSF 116 Query: 109 KTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG---------------------I 147 ++ + ++ + +TI++ W W F YP+ G + Sbjct: 117 QSLYYMD----REPAQVDMTIKITGRQWYWDFEYPDHGGVQFSSFIVTDDDLPEGGLRLL 172 Query: 148 ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 N P + +T+ V++S +P L + A+ G + + PG Y G Sbjct: 173 EVDNRAVVPVGANIRLLITAGDVLHSVAMPSLAIKRDAIPGRLNESWMRIDRPGVYRGQC 232 Query: 208 ASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP--NTMSDMAAFEKLAAPSEYNQVE 264 + G + M I + F WV + + M+ AF LAAPSE E Sbjct: 233 SEICGTNHAFMPM-VIEAVEPERFAAWVNERRAEAGLEPMTVQVAFAPLAAPSEAPPSE 290 >UniRef50_Q7USM3 Cytochrome-c oxidase chain II/c n=1 Tax=Rhodopirellula baltica RepID=Q7USM3_RHOBA Length = 368 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 95/260 (36%), Gaps = 22/260 (8%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 + + LD G L ++ + + +AV + Sbjct: 62 AQSQSALDHAGVGAESIAELFWVMLIGGTLIWLIVVGLAVYAMV---------VPGEHDQ 112 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY- 142 ++ + I+ A+LT+ E +P E +EV + W W Y Sbjct: 113 KKTRMLVIGGGAVFPTIVLTALLTYGLAMLPELQRP--APEGSQVVEVSGVRWWWRVNYR 170 Query: 143 -PEQG-IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 P+ I T NEI P N PV FK+ S V+++F+IP LG ++ M G + RL L Sbjct: 171 MPDGKKIETANEIHLPVNEPVEFKLKSEDVIHAFWIPSLGGKVDMMPGRENRLKLHPTRV 230 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA-------AFEK 253 G + G+ A Y G + M F I R FD W+ + + SD+A Sbjct: 231 GVFRGVCAEYCGEAHTQMAFDVIVQ-SREEFDAWLHQQALPAVSGSDVAEAGREVFEAAG 289 Query: 254 LAAPSEYNQVEYFSNVKPDL 273 A V PDL Sbjct: 290 CGACHAIRGTSADGVVGPDL 309 >UniRef50_Q3JBQ1 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosococcus oceani RepID=Q3JBQ1_NITOC Length = 211 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 6/211 (2%) Query: 27 SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSN 86 + L + +L L F L +V I + + FA KYR K +++ S Sbjct: 6 GSFLGEASSLSRHFDTLFLALFILCSLVTIIITFLIIFFAVKYRRGAKVNRFT--VRKST 63 Query: 87 KVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 +E V +P +FLA+ W E P + + I VV W W +P G Sbjct: 64 AIEFVWTLIP--FGLFLAIFVWAAYFYTELLFPPDDEMVDLDIAVVGKQWMWKLQHPN-G 120 Query: 147 IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 +N++ P + + S V++SFFIP + + G + + + G Y Sbjct: 121 KREINKLHVPLGKNIRLTMVSQDVIHSFFIPAFRIKHDVLPGRYSTIWFRPIKLGEYHLF 180 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 A Y G S M+ K + + + + QW+ + Sbjct: 181 CAEYCGTDHSRMRGKVVVM-EPSDYAQWLQQ 210 >UniRef50_Q7NMM6 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobacter violaceus RepID=Q7NMM6_GLOVI Length = 319 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 102/265 (38%), Gaps = 34/265 (12%) Query: 17 AGTVLLSGCNSALLDPKGQI---GLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 + L+ G LL G ++Q + G M+ + I A+L+ GFA+K + Sbjct: 28 LASFLIGGNIDWLLPLAGSAEAKSVDQLFRFMAIVGTMITLAIVALLVYSGFAFK--RAP 85 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD---------- 123 D P S ++E + +PI+++ FL V ++ L S P Sbjct: 86 DDYSDGPPIEGSLQLEILWTILPIVLVTFLGVYSYDVYLKLIRSNPQTGASHHLGPKSQL 145 Query: 124 ------------------EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKV 165 + +T+ V S+ W W F YP+ G T E+ P N PV K+ Sbjct: 146 REVAQVTDSPELGPKREGQTELTVAVESVQWAWVFTYPQSGGLTTAELHLPVNRPVVLKM 205 Query: 166 TSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIAT 225 T+ V++ F++P + + G T + L+ + G Y G M+ + Sbjct: 206 TAKDVIHGFWVPEFRLKQDIIPGRTTEIRLLPDRVGEYVLHCTQLCGTYHGAMR-ATVYV 264 Query: 226 PDRAAFDQWVAKAKQSPNTMSDMAA 250 A F++W + + +A Sbjct: 265 QTAAEFEKWRTTQVAAGERDAAVAT 289 >UniRef50_B2JRY1 Cytochrome c oxidase, subunit II n=2 Tax=Burkholderia RepID=B2JRY1_BURP8 Length = 354 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 101/278 (36%), Gaps = 26/278 (9%) Query: 27 SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSN 86 + L+P G L + V +L RA DA +P + Sbjct: 38 QSALEPAGIQAERILDLWNLTLIVCGAVFAAVLLAMFIALL--RAQRSDAATAPEPMPDD 95 Query: 87 KVE-------AVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 + E +V + +++ L V T AL P+ IE+ W W Sbjct: 96 RAERRTRRGVIAASSVSVALLVGLVVADVLTDRALSKLPV----ANPVRIELTGQQWWWQ 151 Query: 140 FIYPEQ----GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 +YP G T NE+ PA PV + + V+++F++P L + + G+ + + Sbjct: 152 AVYPSDSGQPGFTTANELHVPAGRPVVVALKAGDVIHTFWVPNLHGKKDMLPGIASTIEF 211 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA----- 250 A++PG Y G A Y G + M +A A + W + + +D A Sbjct: 212 RADKPGVYRGQCAEYCGAEHALMAMLVVAE-SPAQYGAWREHQAGAAVSSADALAQRGRQ 270 Query: 251 -FEK--LAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 FE+ A + PDL + + +A G Sbjct: 271 VFERSTCAGCHTVRGTAAQGTLGPDLTHLMSRQTIAAG 308 >UniRef50_UPI0000164D05 cytochrome c oxidase, subunit II n=1 Tax=Deinococcus radiodurans R1 RepID=UPI0000164D05 Length = 334 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 19/239 (7%) Query: 3 LRKYNKSLGWLSLFA-GTVLLSGCNSA----LLDPKGQIGLEQRSLILTAFGLMLIVVIP 57 R++ + L A G +LS C L D E L A GL +I+ + Sbjct: 44 KREWATAWTRAGLIALGAAVLSSCGQGQNIFLGDQAAAYNREIWDLSKWAIGLSIIIFVG 103 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSH-SNKVEAVVWTVPILIIIFLAVLTWKTTHALEP 116 M K+R A +P H +N++EA + +PI++++ L+VL+ ++ L P Sbjct: 104 VSGMLFYTVQKFREDRNTA--APQQFHGNNRLEAWLIGIPIILVLGLSVLSVRSLARLNP 161 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPE---QGIATV---NEIAFPANTPVYFKVTSNSV 170 ++ + IE + W F YP QG +TV NE+ PA V TS V Sbjct: 162 V-----SQQTLGIEATGAQFWWNFTYPGSPVQGGSTVANGNEMVMPAEQKVAISTTSKDV 216 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRA 229 ++ F+ P LG Q ++ ++ L PG Y G + G + M+FK IA A Sbjct: 217 IHGFWAPNLGGQRASIPTVKRVWELDTQRPGVYQGNCSQLCGASHANMRFKVIALSPEA 275 >UniRef50_D2R8Q4 Cytochrome c oxidase, subunit II n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R8Q4_9PLAN Length = 269 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 14/227 (6%) Query: 35 QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT 94 G +L + L I+ + + F WKY + ++H + VVW+ Sbjct: 41 DHGKVIDNLFMFILYLTGIIFVGTGVALFWFLWKYDVATNTKPIE--YTHGSHTLEVVWS 98 Query: 95 V-PILIIIFLAVLTWKTTHALEPSKPLAHD--EKPITIEVVSMDWKWFFIYPE------- 144 + P ++F+A+ + +P D KP EV ++W Y Sbjct: 99 IIPAAALLFIAIYQMNAWADAKMRRPQLADGSPKPAIAEVTGRQFEWRIRYAGADGVVGT 158 Query: 145 -QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 + TVNE+ PAN + + S V++SFF+P L + + GM+ + AN+ G Y Sbjct: 159 PDDVLTVNELRVPANEEIVLAIKSQDVLHSFFLPNLRLKQDVVPGMKQFVWFRANKTGVY 218 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 D + A G G M+ + I RA FD+W+A+A + N A Sbjct: 219 DIVCAELCGWGHYKMRGR-ITVQSRADFDEWLAQAYRDQNVAEFTAE 264 >UniRef50_B7KCJ0 Cytochrome c oxidase subunit 2 n=12 Tax=Cyanobacteria RepID=B7KCJ0_CYAP7 Length = 316 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 118/288 (40%), Gaps = 30/288 (10%) Query: 12 WLSLFAGTVLLS----GCNSALLDPKGQIGLEQRSLI--LTAFGLML--IVVIPAILMAV 63 WL L A ++L+ G + LI L +F + L + + + Sbjct: 21 WLMLIALALVLAIISLGIGKLSYSWLPPQASAESQLIDNLFSFLVTLGSFIFLGVTGTVL 80 Query: 64 GFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE-------- 115 + +AS D+ P+ + +E + +PIL+++++A +++ + Sbjct: 81 YSIFFQQASKYDSSDGPHIEGNITLEVIWTAIPILLVVWIATYSYQIYIDMNIQTGMGLG 140 Query: 116 ----PSKPLAHDEKPIT--------IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYF 163 P K + P+T I+V + W W F YPEQG+++ E+ P++ + Sbjct: 141 HIHLPIKMESAMAAPMTNGSEEVENIDVQAKQWAWVFNYPEQGVSST-ELHLPSDRRIRL 199 Query: 164 KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAI 223 + S V++ F+IP + A+ G ++ G Y + +SG F+ M+ + Sbjct: 200 TLKSEDVIHGFYIPAFRIKQDAIPGRTIQVEFTPIRQGKYRLRDSQFSGTYFATMQANVV 259 Query: 224 ATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 + +W+ + + T+++ A + A + + + ++ P Sbjct: 260 VQ-SPEDYQKWLKTSSKLKPTVAENEAASEYAQEVKASFKTGWPSIAP 306 >UniRef50_C1VBF5 Cytochrome c oxidase subunit 2 n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VBF5_9EURY Length = 254 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 19/235 (8%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWK 68 S+ L+LFA V SA L I L+ AF + L+V + + K Sbjct: 13 SVLILALFADPVAAQASASAEL-----INDLNSRLLYVAFPITLLVE----FILLYAVVK 63 Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPI-LIIIFLAVLTWKTTHA--LEPSKPLAHDEK 125 +R ++ P + N+ + WTV +I++F+ V ++ + Sbjct: 64 FRNNDN-----PLPTKENRRLEITWTVATAIILLFVGVASYGVLADDNVTHQPEEELQGD 118 Query: 126 PITIEVVSMDWKWFFIYPEQG-IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 P+ + + W W YPE G T EI P + PV F+VTS V++ F +P++G + Sbjct: 119 PVVVHAEAYQWGWEMSYPEDGNFTTGTEIVVPKDRPVVFEVTSRDVIHGFHVPKMGMKTD 178 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 AM G + + E TY G Y G S M F + + W+++ + Sbjct: 179 AMPGQINTVKTVPYEEDTYQGYCTEYCGVAHSQMYFSVEVV-SQEEYQTWLSEQQ 232 >UniRef50_UPI0001C30E64 cytochrome c oxidase, subunit II n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E64 Length = 344 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%) Query: 16 FAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 A +++ + G I L++ + V + + + AW++R Sbjct: 21 IALALVIDWFPADAAKQAGPIDTLYDVLMIVSVP----VFVLVTTVVLYCAWEFRMRPGQ 76 Query: 76 AKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 + H N V+WT VP ++++ L + +E P + + V + Sbjct: 77 EQQDGPPIHGNTRLEVIWTAVPAIMLVALCSYAYAVLRDIEEKHP-----DTLVVNVSAQ 131 Query: 135 DWKWFFIYPEQGIATVNE--IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTR 192 + W + YP++G VN + P + PV FKV + V++ F++P +I A+ G+ T Sbjct: 132 QFAWRYSYPQEGGRPVNSTMLVLPKDRPVLFKVRAEDVIHDFWVPAFRVKIDAVPGITTE 191 Query: 193 LHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 + G Y + A G G + M+ A A+FD+W+A+ Q Sbjct: 192 VRATPTRTGRYPVVCAELCGLGHAVMRSTAWVV-TPASFDRWLARQGQP 239 >UniRef50_A4A0M8 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0M8_9PLAN Length = 325 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 100/289 (34%), Gaps = 27/289 (9%) Query: 21 LLSGCNSALL--DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY 78 +L+ + L L + + + + + V F KY Sbjct: 1 MLADADGGLFFGPANSTFAPMVDDLFDLIYWISAFFFVLIVGVMVYFVLKYYRRPG-HGP 59 Query: 79 SPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKW 138 P+ +H+N +E +P +++ V+ + T+ + P + I V + W W Sbjct: 60 QPSPTHNNTLEIAWSVLPSFLLVVFFVMGF--TNYMSMRTP---PDDAYEIHVQAKKWSW 114 Query: 139 FFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA- 197 F+YP A +++ P PV F + S V+++ F+P +++ + G + + A Sbjct: 115 LFVYPNG--AESSDLHIPVGRPVRFILESEDVLHNMFVPAFRTKMDCVPGRYNEIWVQAV 172 Query: 198 NEPGT---------YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ--SPNTMS 246 N GT +D A Y G S M + + FD W+ KA NTM Sbjct: 173 NTTGTGVNPDDHKPHDLFCAEYCGRDHSNMH-AFVYVYETGDFDAWLEKASNLYEGNTMV 231 Query: 247 DMAAF----EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 + + + + + D F MD Sbjct: 232 QVGEILYKRKGCISCHSIDGTKKAGPSFKDSFGTAHKFTDGTEAVMDEN 280 >UniRef50_D2RSI3 Cytochrome c oxidase, subunit II n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RSI3_9EURY Length = 256 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 103/249 (41%), Gaps = 34/249 (13%) Query: 18 GTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAK 77 GTV N L+D + L+ A L L V++ I AV F Sbjct: 23 GTVAAQSPNRELID------GLEYQLLYAALPLTLFVLMILIYAAVKFH---------DN 67 Query: 78 YSPNWSHSNKVEAVVWTVPILIIIF---LAVLTWKTTHALEPSKPLAHDEK--------- 125 P + + + WT II+ L+ + + PS+ L D + Sbjct: 68 DDPQPTTEDPSLEITWTAATAIILLFVGLSGYSVLVNPYISPSQALDTDNQSQEGFDSFE 127 Query: 126 ------PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 + V W+W YPE + T N+I PAN V F +TS+ V++S F+P L Sbjct: 128 DLPDTGDEEVHVRGYQWEWQATYPEANVTTENQIVIPANEDVTFWLTSDDVIHSLFVPDL 187 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G + A G TR I +EPG YD + A + G G S M+ + I D +DQW+++ + Sbjct: 188 GVKQDAFPGDYTRARTIVDEPGRYDVVCAEFCGAGHSRMQGE-IVVVDSETYDQWLSENE 246 Query: 240 QSPNTMSDM 248 + D Sbjct: 247 GTVAEAPDP 255 >UniRef50_C7NIK2 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococcineae RepID=C7NIK2_KYTSD Length = 304 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 101/285 (35%), Gaps = 30/285 (10%) Query: 4 RKYNKSLGWLSLFA-GTVLLSGCNSALLDPKGQI-------GLEQRSLILTAFGLMLIVV 55 R++ + G ++LS C S+ +G + + + + L V Sbjct: 9 RRWQRPAVLAGAATLGALVLSACGSSDQIARGYLPEGVTENSDGVTTFWVGMWIAALAVG 68 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + YR D++ ++ +E + VPI+++ L V K + L Sbjct: 69 VLVWGLTAWCIVAYRR-KDDSELPKQVRYNMPIEILYTVVPIVMVAGLFVQNVKLENDLM 127 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE----------------IAFPANT 159 + + V W W F Y + + + P N Sbjct: 128 DLNEEPEN----IVHVAGKQWSWDFNYLSDDVHESGQQAVLTGEEGVAEGLPTLYLPVNE 183 Query: 160 PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 F +T+ V++SF++P+ ++ + G+ R + E GTY G A G S M Sbjct: 184 RTEFVLTARDVIHSFWVPQFLQKLDMIPGVVNRFQVTPTEVGTYQGKCAELCGAYHSEML 243 Query: 220 FKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVE 264 F+ +R +D+ + + + + +++ N VE Sbjct: 244 FQVKVV-ERDEYDKQMQALEDAGKSGFLDTGYDRKELVHGENDVE 287 >UniRef50_Q2JUD7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechococcus RepID=Q2JUD7_SYNJA Length = 342 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 99/259 (38%), Gaps = 38/259 (14%) Query: 15 LFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 L L G N LL SL + + + + + + A +YR Sbjct: 15 LLTLASLWYGQNHHLLPEAAANSAPLFDSLFNSTITIATGIFLVVEGVLLYCAIRYRKRR 74 Query: 74 KDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTT----------------HALEP 116 D + + +H N + +VWT VP +II++L + + A+EP Sbjct: 75 GD-RGDGDPNHGNVLLEIVWTAVPAVIILWLGLASLDVYQAVYGGADVGGHIHTAMAMEP 133 Query: 117 SKPLAHDEKP-----------------ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANT 159 S+ A + + ++V M + W F YPE G+ E+ P N Sbjct: 134 SQDSAAGDPDYAYTPALLPGKEMGQPELVVQVQGMQYAWVFTYPESGLV-AGELHLPLNK 192 Query: 160 PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 V +T+ V ++F++P+ + + G +T L + + GTY + A GP M Sbjct: 193 RVRLNMTALDVNHAFWVPQFRLKQDLIPGRETHLEFVPTQLGTYPIVCAELCGPYHGVMA 252 Query: 220 FKAIATPDRAAFDQWVAKA 238 + I F++W + Sbjct: 253 GQLIVE-TPEEFERWQQEQ 270 >UniRef50_Q02BQ9 Cytochrome c oxidase subunit 2 n=3 Tax=Bacteria RepID=Q02BQ9_SOLUE Length = 332 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 92/248 (37%), Gaps = 10/248 (4%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 + E L+ + + FA +YR +++ P+ +H+ +V Sbjct: 11 ASTLAPEVDHLLYFLLAVSTFFTLLIFGAIFYFAIRYRRRSENE--LPHVAHTGYTLEIV 68 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 W+V I + + + TW + KP I I V W W + E G +NE Sbjct: 69 WSV-IPFGLTMVMFTWGASIFFNSRKP---PNDAIQIYAVGKQWMWKLEHME-GQREINE 123 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P PV + S V++SFFIP ++ + G T A + G Y A Y G Sbjct: 124 LHIPVGRPVRITMASEDVIHSFFIPAFRTKQDVVPGTYTTTWFTATKTGKYHLFCAEYCG 183 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP- 271 SGM I + A ++ W+ S + + + A + ++ + Sbjct: 184 TRHSGMIGW-IYVMEPADYEAWLGGGSGSGSLADNGKKLFEQLACNNCHREDNTGRCPNL 242 Query: 272 -DLFADVI 278 LF + Sbjct: 243 VGLFGQPV 250 >UniRef50_A6WD34 Cytochrome c oxidase subunit 2 n=4 Tax=Actinomycetales RepID=A6WD34_KINRD Length = 324 Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 108/300 (36%), Gaps = 42/300 (14%) Query: 2 RLRKYNKSLGWLSLF-AGTVLLSGCNSA--------LLDPKGQIGLEQRS-----LILTA 47 R R+ K+L +L T+ L+GC P IG ++ L + Sbjct: 15 RRRRPPKALLAGALTGVATMALTGCAGDWPDASASNFFLPDASIGATNQTERISVLWDGS 74 Query: 48 FGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLT 107 + L+V + + + YR D + ++ +E + VP++++ L T Sbjct: 75 WIAALVVGVLVWALTIWCVVAYRRRKSDPELPAQVRYNMPIEILYTIVPVMMVGVLFYYT 134 Query: 108 WKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA------------------- 148 + A+ + +TIEVV W W F Y ++ Sbjct: 135 ARDQQAITDT----SQTPDVTIEVVGKKWSWDFNYLDENGQPGVYDTGRQADLTGVPAPE 190 Query: 149 -TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 + + P + V F + + V +SF++P ++ +AG + + GT+ G Sbjct: 191 LELPTLYLPVDQRVQFDLYARDVNHSFWVPAFLMKMDLIAGSPNHFQVTPTKEGTFLGEC 250 Query: 208 ASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFS 267 A G S M F +A + Q + + + T S LA E QVE S Sbjct: 251 AELCGEYHSEMLFNVKVV-SQAEYQQHLDDLQAAGQTGSLPTT---LAGAEEMAQVEADS 306 >UniRef50_B0C0A3 Cytochrome c oxidase subunit 2 n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C0A3_ACAM1 Length = 328 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 104/265 (39%), Gaps = 49/265 (18%) Query: 41 RSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILI 99 S++ A GL LIV L+ FA++ D + H N +VWT +P ++ Sbjct: 47 ASMMAIATGLFLIV--QGALLYSLFAFR---RKSDDQTDAEPVHGNVPLEIVWTAIPAML 101 Query: 100 IIFLAVLTWKTTHALE----------------PSKPLAHDE------------------- 124 +++L + ++ +++ + D Sbjct: 102 VLWLGIYSFDVYQSIDSVGTMGSHNMAHQHGDMERVADADAATMVTDQGQMPSGALSQAV 161 Query: 125 -----KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 +P+ + V + + W F YP+ GI + E+ PAN PV +++ V+++F++P Sbjct: 162 ATETVEPLQVNVDGLQYAWLFTYPDTGIIS-GELHLPANRPVTLNISARDVIHAFWVPEF 220 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 + A+ G T L+ + G Y I A G MK ++I A + WV Sbjct: 221 RLKQDAVPGQVTHLNFQPTKEGVYPVICAELCGAYHGAMKTRSIVH-SGAEYQAWVDSQL 279 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVE 264 + NT + A +P E++ Sbjct: 280 VA-NTSRETVAQSVTKSPLEHHAAA 303 >UniRef50_B5ZEX4 Cytochrome c oxidase, subunit II n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZEX4_GLUDA Length = 321 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 80/243 (32%), Gaps = 6/243 (2%) Query: 30 LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVE 89 L + L+ + L V+ + + ++RA H + Sbjct: 4 LPEASSHAMRIDILLAGLVLISLAVLGLVFGLMLLNVLRFRAGRTTDIVRAIAEHKSWWF 63 Query: 90 AVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIAT 149 + WT L +IF + W T + +P A I + V W W YP G Sbjct: 64 EISWTSATL-VIFFGLFLWATQLYVVAFRPPAG---AIQVYVTGKQWMWKIQYPG-GQRE 118 Query: 150 VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 +N + P PV +TS V++ F IP L + + G L A + G++ Sbjct: 119 INALHVPVGRPVQLLLTSEDVIHDFSIPALRIKHDVLPGRYQSLWFTATQTGSFRLYCTQ 178 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNV 269 + G S M A + W+ S + A + S + ++ Sbjct: 179 FCGLAHSRMTGTVTVL-SAADYAGWLNGTPASGSLAMTGEALFIRSGCSGCHASSRYAPD 237 Query: 270 KPD 272 D Sbjct: 238 AAD 240 >UniRef50_B0RXK0 Cytochrome c oxidase subunit 2 n=13 Tax=Gammaproteobacteria RepID=B0RXK0_XANCB Length = 327 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 36/224 (16%) Query: 47 AFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVL 106 L + VVI A++ ++ + +SH+ K E + +P+L++I +A Sbjct: 57 MVALWVCVVIGALVFGAMGYAIFKFRKSKGAVAAQFSHNTKAEVLWTVIPVLVLIAMAWP 116 Query: 107 TWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA------------------ 148 A+ ++ E +T++V W W + Y QG+ Sbjct: 117 ATAKLIAMYDTR-----ESEMTVKVTGYQWMWKYEYLGQGVEFTSRLARESDRIRQSGER 171 Query: 149 ------------TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 N + P +T + F +T++ V++++++P LG + A+ G+ Sbjct: 172 PTAASQPHYLLDVDNRLVLPVDTKIRFVITADDVIHAWWVPALGWKQDAIPGIVNEAWTN 231 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 +PG Y G A G M A P +A F +W+A + Sbjct: 232 IEKPGVYRGQCAELCGKDHGFMPIVVEALP-KAEFQRWLASRRS 274 >UniRef50_B6IXF5 Cytochrome c oxidase subunit 2 n=6 Tax=Alphaproteobacteria RepID=B6IXF5_RHOCS Length = 285 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 89/234 (38%), Gaps = 31/234 (13%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 L + + S ++ + + + + + W++RAS P+ + Sbjct: 39 GLGLQQAASPVKQQLDSFHDLLLVIITAITLLVLALLIYVMWRFRASKN---PVPSRTSH 95 Query: 86 NKVEAVVWTVPILIIIFLAVL-TWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 N V V WTV ++I+ + + +++ + ++ E +T++V W W + YP+ Sbjct: 96 NTVLEVAWTVIPVVILVVIAIPSFQLLYFMD-----RTPEADMTVKVTGRQWYWSYEYPD 150 Query: 145 QG---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQI 183 G + N + P V VT++ V++S+ IP LG + Sbjct: 151 HGNIAFDSFMLSEDEVPDPKLRLLEVDNRLVVPVGANVRVLVTASDVIHSWAIPSLGIKK 210 Query: 184 YAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 A+ G A+ G + G + G M A + FD WVA+ Sbjct: 211 DAVPGRLNETWFRADAEGVFYGQCSEICGTNHGFMPIAVEAV-SKERFDAWVAE 263 >UniRef50_B5WPG4 Cytochrome c oxidase, subunit II n=2 Tax=Burkholderia RepID=B5WPG4_9BURK Length = 228 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 103/241 (42%), Gaps = 28/241 (11%) Query: 13 LSLFAGTVL-LSGCNSAL--LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 L++ AG++ LSGC L LDP G L +I+ +++ + ++ Sbjct: 3 LTVQAGSLAALSGCAGPLSTLDPSGPAAASIAGLWWVMLAGAVILFAMVLVLFLMTVFR- 61 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTV------PILIIIFLAVLTWKTTHALEPSKPLAHD 123 P W ++V W V P +I+I L L P + A Sbjct: 62 ----------PGW--GSRVSPARWIVLGGLVLPAVILIPLICYALYAGELLLPLRAHA-- 107 Query: 124 EKPITIEVVSMDWKWFFIYPEQG-IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 P IE ++ W+W F YPE G + T N + PA TPV VTS V+++F+IPR + Sbjct: 108 --PARIEAIAQQWRWTFRYPELGNVETGNVLHLPAGTPVDIVVTSMDVVHAFWIPRFAGK 165 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 I A+ G T L + A++PG Y G + G G + M F I F V A + Sbjct: 166 IDAVPGHHTLLRIEADQPGQYAGQCNQFCGIGHAQMHFTVI-VDRPEDFPAAVKSAAANG 224 Query: 243 N 243 Sbjct: 225 E 225 >UniRef50_C1DG42 Cytochrome c oxidase subunit 2 n=5 Tax=Gammaproteobacteria RepID=C1DG42_AZOVD Length = 385 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 90/247 (36%), Gaps = 34/247 (13%) Query: 12 WLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI-LTAFGLMLIVVIPAILMAVGFAWKYR 70 W+ L + + L + ++ + + RS+ L + V I ++ F + Sbjct: 8 WMGLLSCSALSQAQAAWDVNMRPGVTEVSRSVFDLHMTIFWICVAIGVLVFGAMFWSMFA 67 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT-HALEPSKPLAHDEKPITI 129 ++ + +VE + +P+LI+I +AV +T H +PS+P + I Sbjct: 68 HRRSRRPQPAHFHENTRVEVLWTVIPLLILIAMAVPATRTLLHIYDPSEP------DLDI 121 Query: 130 EVVSMDWKWFFIYPEQGIATVNEI-------------------------AFPANTPVYFK 164 +V WKW + Y + + + + PA V F Sbjct: 122 QVTGYQWKWHYKYLGEDVEFFSNLATDRNAIGNQAPKNDHYLLEVDEPLVIPAGAKVRFL 181 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA 224 VT+ V++S+++P L + A+ G EPG Y G G M + Sbjct: 182 VTAADVIHSWWVPELAVKKDAIPGFINETWTRVAEPGLYRGQCTELCGKDHGFMPV-VVE 240 Query: 225 TPDRAAF 231 A + Sbjct: 241 VKAPADY 247 >UniRef50_Q114N6 Cytochrome c oxidase subunit 2 n=9 Tax=Cyanobacteria RepID=Q114N6_TRIEI Length = 339 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 93/299 (31%), Gaps = 59/299 (19%) Query: 15 LFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 + L +G N LL + F + + I V K+R Sbjct: 19 VVTIISLWAGQNHGLLPEAASEQAPLVDRFFDIMFTIATGLFIIVEGTIVFCMIKFRRRQ 78 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP-------------- 119 D N+ + +E +P +I+I L + + + P Sbjct: 79 GDDSDGANFRENLPLEIFWTAIPSIIVIGLGIYSVDIYRQMGGFDPNSTMVAHHHAPSYQ 138 Query: 120 -------------------------------------LAHDEKPITIEVVSMDWKWFFIY 142 A + + +++ + + W Y Sbjct: 139 EVAKMRGSAIAAPLIADTEGMEATKVASKYGFGATPQGAGKQADVIVDITGIQYGWLMNY 198 Query: 143 PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 P+ G+ E+ P N + +++ V++SF+IP + A+ G +T+L +A + G Sbjct: 199 PDSGV-FAGELHIPVNKDIQINLSAQDVIHSFWIPAFRLKQDAIPGKETQLRFVATKIGE 257 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYN 261 Y A G M+ + + + W+ + NT + + A + + Sbjct: 258 YPVYCAELCGSYHGAMR-TTVVVQTQEEYAAWIEE-----NTFAQQQELNQAIAVNTAD 310 >UniRef50_C5CCB5 Cytochrome c oxidase subunit 2 n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CCB5_MICLC Length = 286 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 98/255 (38%), Gaps = 35/255 (13%) Query: 17 AGTVLLSGCNSALLDPKGQ-------IGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 ++L+GC++ + + L + ++ ++V + A + Y Sbjct: 4 TALLVLTGCSAEVQRGWYPGTRDTTNHNAQLTDLWVNSWIAAMVVGLLAWGAMIWCMVAY 63 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R D + +++ +E + +PIL+++ W T+ ++ D+ P+T+ Sbjct: 64 RRRKNDQGFPKQTAYNVPLETMFTAIPILMVVTF----WGFTNRVQTEVDRPVDDSPLTV 119 Query: 130 EVVSMDWKWFFIYP-----------------------EQGIATVNEIAFPANTPVYFKVT 166 V W W F Y E T+ + P + PV+F++ Sbjct: 120 TVYGKQWSWDFNYSYEQENGEVIEAHYSGIQAQLDGTEGVRDTLPVLYLPNDVPVHFELK 179 Query: 167 SNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATP 226 S V +SF+IP+ + + G L+L E G+YDG A G S M F Sbjct: 180 SRDVAHSFWIPQFLQKRDMVPGKTNHLYLTPQELGSYDGKCAELCGESHSEMLFNVEVV- 238 Query: 227 DRAAFDQWVAKAKQS 241 D A F Q + + + Sbjct: 239 DEAEFVQRLEEMEPG 253 >UniRef50_B5INR0 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INR0_9CHRO Length = 292 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 107/296 (36%), Gaps = 54/296 (18%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDP-KGQIGLEQRSLILTAFGLMLIVVIPAI 59 M++R + + GT LL G LL SL F + ++ + + Sbjct: 1 MQIRAALTTALATTGLVGTGLLVGTRVNLLPVEASSNASTYDSLFKVLFSIGTMLFLGIL 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 ++ V ++R D+ P + +E V +P ++I+F+ + ++ + P Sbjct: 61 IVVVYSLVRFRRPVGDSGDGPAIEGNLPLEIVWTAIPAVVILFVGIYSYDIYERMGGMAP 120 Query: 120 L-------------------------------------------------AHDEKPITIE 130 L + ++ Sbjct: 121 LMDHTTMHEAAMHEAAMHHSAMPASAAPDSQAGERIWGGIGPAAAADRNGGAAAASLPVD 180 Query: 131 VVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 V +M + + F YPE I T E+ P PV ++ + V+++F++P+ + + G Sbjct: 181 VTAMQFAFIFHYPEGDI-TSGELHVPLGQPVELRMQARDVIHAFWVPQFRLKQDVIPGQT 239 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 TRL A GTY + A G GM+ + + AF+ W + + +P T + Sbjct: 240 TRLSFTATRAGTYPIVCAELCGAYHGGMRSNVVVH-EPEAFEAW--RLQNAPATTT 292 >UniRef50_C7MCD6 Cytochrome c oxidase subunit 2 n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCD6_BRAFD Length = 312 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 85/233 (36%), Gaps = 22/233 (9%) Query: 38 LEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI 97 +L + ++ ++++V + + + A YR D + + +E + VP+ Sbjct: 53 ERITNLWVGSWTVLVLVGLIIWGLTIWCAIAYRRRKHDKGFPIQLRYHVPLELMFTLVPV 112 Query: 98 LIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI---------- 147 ++++ T + +E E T+ VV+ W W Y +Q + Sbjct: 113 VMVLTFFYFTQRDAREIEMHV----AEPDTTVNVVAKQWSWDINYVDQDVHEPAGVQSFA 168 Query: 148 -------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 ++ E+ P + V F++ S V++SF++ + G T + Sbjct: 169 TGEPGAADSLPELWLPVDQTVEFRLDSRDVIHSFWVVDFLYKKDMFPGHTTSFQITPTRE 228 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 G Y+G A G S M F + + FD + + + N + Sbjct: 229 GVYEGKCAELCGEYHSDMLFNVVVV-SQEEFDAHMEELRAQGNDGQLGVDLNR 280 >UniRef50_A5PDP5 Putative cytochrome c oxidase chain II protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDP5_9SPHN Length = 352 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 111/299 (37%), Gaps = 26/299 (8%) Query: 27 SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSN 86 +LDP G + +L + FGL V + ++ A+ A K W Sbjct: 14 PPVLDPAGPYSGKVTTLAWSLFGLGAFVTL-VVVFALWVAIK---------GPDKWKTKL 63 Query: 87 KVEAVVWTVPILI--IIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 E +W + I+ A+L W T ++P+ DE + I + W + Y + Sbjct: 64 GGERAIWLGGVAFPGIVLTALLVWGLTLTASLTEPIRGDE--MRIRITGEMWWFRVQYLD 121 Query: 145 QGIAT----VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 A NEI P PV ++ S V++SF++P L + + G +T L + A+ Sbjct: 122 ASGAVLMEDANEIHIPVGRPVVLELESADVIHSFWVPHLSGKKDMIPGRRTLLRIEADRA 181 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS------PNTMSDMAAFEKL 254 G Y G+ A Y G + M F A+A D F +W A+ T + F Sbjct: 182 GEYGGVCAEYCGRQHALMGFVAVAHDD-GDFREWYAERNDRLIPAGLGATTPEEPLFASR 240 Query: 255 AAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAES 313 SE + F V + + + G+ G D++H S Sbjct: 241 TVGSEQSADPRPVAGANADFGQVSGQELFMQSGCAACH-RVAGTEANGLAGPDLTHVGS 298 >UniRef50_Q31JY7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechococcus elongatus RepID=Q31JY7_SYNE7 Length = 315 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 103/303 (33%), Gaps = 56/303 (18%) Query: 12 WLSLFAGTVLLS-----GCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 L+L AG + G N LL L T + + + + Sbjct: 7 ILTLLAGVAITCLSLWYGQNHGLLPVAAATDAPLVDGLFNTMMTIATGLFLLVQGLIFVI 66 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHAL---------- 114 W++R D + H N ++WT +P++I++ L+V ++ + Sbjct: 67 LWRFRRKPNDVTDAAP-IHGNLALEILWTGIPVVIVLGLSVYSFSVYTTMGGLSVGHGGG 125 Query: 115 -----EPSKPLAHDE--------------------------KPITIEVVSMDWKWFFIYP 143 +P E +T+ V + + W F YP Sbjct: 126 HMAHAQPRDSAIAAELSSDSLQDSKSTPRVSAGLGAPTEALPDVTVNVKGLQFAWIFNYP 185 Query: 144 EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 + E+ P V ++ + V+++F++P+ + A+ G +TRL + GTY Sbjct: 186 SHNLI-AGELHLPLGKSVQLEIEAQDVIHAFWVPQFRLKQDAIPGERTRLQFTPTQLGTY 244 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM-----SDMAAFEKLAAPS 258 + A G M+ + I +D+W+ + + + AA + P Sbjct: 245 PIVCAELCGSYHGAMRSQVIVE-TPEDYDRWIQSQTTTAAVVPSRLETATAALDLQVEPE 303 Query: 259 EYN 261 + Sbjct: 304 HLH 306 >UniRef50_A6CA06 Cytochrome c oxidase subunit 2 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CA06_9PLAN Length = 336 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 95/281 (33%), Gaps = 27/281 (9%) Query: 15 LFAGTVLLSGCNSALLDPKGQ-IGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 LF +L + +G + S+ + + + + + F KYR Sbjct: 5 LFIPELLANAEAGFWFPAQGSTVAENVDSVYFFILWVCTFFFVLIVGLMLLFMVKYRYRP 64 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVS 133 + +H+ +E +P L+ I + + + T L+ P A + I+VV+ Sbjct: 65 GVEAEN-TATHNLTLELSWSVIPTLLTIVMFWVGF--TSYLDMRTPPAASYQ---IDVVA 118 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 W W F YP I + E+ P + V + S+ V++S +IP +++ + G T+ Sbjct: 119 KKWVWAFKYPNGWIES--ELHIPLDENVTLTMASDDVIHSLWIPAFRTKMDVVPGRYTQE 176 Query: 194 HLIANEPGT------------YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA--- 238 A P Y + + Y G S M K + R FD+W+ A Sbjct: 177 WFKAIAPPVPEGEESVEYPLEYPLMCSEYCGTKHSEMVTKVVVHETRGDFDKWLQAAADI 236 Query: 239 ---KQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD 276 K + LF Sbjct: 237 HKNKNPIEAGEYFYKSRGCIQCHSLDGSIIKGPSFKGLFGS 277 >UniRef50_B0RIL0 Cytochrome c oxidase subunit 2 n=6 Tax=Actinobacteria (class) RepID=B0RIL0_CLAMS Length = 316 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 107/308 (34%), Gaps = 43/308 (13%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLD---PKGQIG----LEQRSLILTAFGLMLI 53 +R + + L ++LL+GC L P L +TA+ ++L Sbjct: 14 VRFTRRQRWLTIPVALGISILLAGCTQQQLQGFLPTEPGTTNHVDSVIGLWVTAWIVLLA 73 Query: 54 VVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHA 113 V + + + A YR ++ +E VP+++++ T K A Sbjct: 74 VGVLTWGLTIWAAVVYRRRKGQTGLPVQMRYNMPIEIFYTIVPLILVLGFFAFTAKDQAA 133 Query: 114 LEPSKPLAHDEKPITIEVVSMDWKWFFIYP---------------EQGIATVNE------ 152 +E D+ + ++V W W F Y EQG+ V++ Sbjct: 134 IEARF----DKPEVKVQVFGKQWAWDFNYLGGETEAGQPIEGGAYEQGVQAVDDPNGPQG 189 Query: 153 ---------IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 + P NT V ++ + ++SF++ + ++G + I + GTY Sbjct: 190 SIDKDKLPTLYLPVNTKVELELNTRDTLHSFWVVDFLYKKDLISGKTNYMTFIPEKEGTY 249 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLA-APSEYNQ 262 G A G S M F+ ++ ++ K K + +++L P Sbjct: 250 MGKCAELCGEYHSLMLFQVKVV-SVDEYNAYIEKQKAAGFAGDLGKDYDRLQNLPGTDVP 308 Query: 263 VEYFSNVK 270 S K Sbjct: 309 ATTESAEK 316 >UniRef50_B8ES67 Cytochrome c oxidase, subunit II n=1 Tax=Methylocella silvestris BL2 RepID=B8ES67_METSB Length = 318 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 91/254 (35%), Gaps = 20/254 (7%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW 93 G L L + IV + L+ +G ++ RA A V+ Sbjct: 13 GARALAILPLTKGMIAISSIVTLVVALLLLGAIFRSRA----AFDPRGLVQDTGPLRWVY 68 Query: 94 TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY-----PEQGIA 148 L + LA + T + + E +++EV W W Y P Sbjct: 69 LGAALTVAALAGVLVWTMTTM-AAAVRTGPEAALSLEVTGRQWWWEVRYLDRAHPSNIFT 127 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 T NEI P V + V +SF++P LG + + G L A++ G+Y G + Sbjct: 128 TANEIHIPIGKFVRVDLRGGDVSHSFWVPALGGKTDMIPGQVNTTWLQADKVGSYRGQCS 187 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQW-------VAKAKQSPNTMSD-MAAFE-KLAAPSE 259 Y G + M F IA A F+ W VA A P+ ++ A F+ + A Sbjct: 188 EYCGKQHAHMAFTVIAE-SEAQFEAWRTAQLRSVAPADPEPSASAEGRATFQTRCGACHT 246 Query: 260 YNQVEYFSNVKPDL 273 V PDL Sbjct: 247 VRGTSAGGRVGPDL 260 >UniRef50_A4WT84 Cytochrome c, monohaem n=9 Tax=Rhodobacteraceae RepID=A4WT84_RHOS5 Length = 324 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 109/283 (38%), Gaps = 30/283 (10%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +R+ ++ L + +G GC+ ++ G +E L A L+ V++ L Sbjct: 1 MRRGQRAAVCLLILSGAG---GCHGPQSVFSAGGADAIELNRLF--AVMLVGAVILWISL 55 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPIL--IIIFLAVLTWKTTHALEPSK 118 + F R + ++ EAV+ IL +++ A+L W + + Sbjct: 56 NGLFFHVTRRRTGHMSR--------KLAEAVIIGGGILLPVVVLTALLAWGLSIMPDQRA 107 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSF 174 P + + +W W Y +G + + NE+ PA ++ + V++SF Sbjct: 108 PGEGP----RVRITGEEWWWRVEYLPEGAAGPVISANELRLPAGRRTEIELQAGRVIHSF 163 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 ++P LG + + G TR+ L PGTY G A + G + M A+ + F +W Sbjct: 164 WVPGLGGKTDMIPGRTTRMSLEPVTPGTYRGQCAEFCGASHALMALNAVVL-EEGDFARW 222 Query: 235 V--AKAKQSPNTMSDMAAF--EKLAAPSEYNQVEYFSNVKPDL 273 + A P A F E A V PDL Sbjct: 223 LEAEAAPARPEEGEGRAIFFREGCGACHTIRGTPAAGAVGPDL 265 >UniRef50_B8EPK1 Cytochrome c oxidase subunit 2 n=1 Tax=Methylocella silvestris BL2 RepID=B8EPK1_METSB Length = 303 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 86/231 (37%), Gaps = 32/231 (13%) Query: 35 QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT 94 I E + F L+ I+V + + W Y N++ + N + V WT Sbjct: 56 PIAHEMHA--FHDFILLPIIVGICLFVLALLGWIYIRYNENKNPVATTTTHNSLLEVAWT 113 Query: 95 V-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP-EQG------ 146 V P++I++ +A+ +++ + L IT++ W W + YP +QG Sbjct: 114 VLPVMILVIIAIPSFRLL-----THQLVIPPADITVKATGKQWFWTYDYPKDQGGGFSFD 168 Query: 147 ----------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 ++ NE P V+ VT V++SF IP G +I A+ G Sbjct: 169 SYLIPESDLKPGDIRQLSVDNEAVVPVGKVVHMLVTGADVIHSFTIPSFGIRIDAVPGRM 228 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 A G Y G + G + M AI + W+ A + Sbjct: 229 NETWFKAEREGIYYGQCSKLCGKDHAYMPI-AIRVVSPETYSAWLVSAAKK 278 >UniRef50_Q1J1C4 Cytochrome c oxidase subunit 2 n=2 Tax=Deinococcus RepID=Q1J1C4_DEIGD Length = 435 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 109/292 (37%), Gaps = 36/292 (12%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILT----AFGLMLIVVIPAILMAVG 64 G L + LL+GC S L G + IL A L +I+ + Sbjct: 44 RAGLLGM--AAALLTGCQSQQLLTLGDMSSAYNREILWMSIPAIALSIIIFVGVSWALFY 101 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 K+R N DA + + +N++E ++ VP++I++ L+VL ++ L P + Sbjct: 102 TVRKFREENNDAPPA-QFHGNNRLETILVVVPVIIVMLLSVLAVRSLARLNPV-----PQ 155 Query: 125 KPITIEVVSMDWKWFFIYPE------QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 I+V+ + W F YP + NE+ P +TS V+++F+ P Sbjct: 156 DAEKIDVLGKQFWWNFSYPGAPAAAGGNVTNGNELVLPTGKWASLTITSGDVIHAFWAPN 215 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 LG Q A G Q + + G Y G G + M+FK IA P ++ ++ A Sbjct: 216 LGGQRDATPGTQKTWQIQTDRAGVYQGNCNVLCGASHANMRFKVIALP-PDRYNSFLTAA 274 Query: 239 KQSPNTMSDMAAFEK-----------------LAAPSEYNQVEYFSNVKPDL 273 + + E+ AA PDL Sbjct: 275 QAYRAPTPAPGSAEERGYTLFTQGKPSTGALACAACHRVQGTPANGQAGPDL 326 >UniRef50_B8H5D8 Cytochrome c oxidase subunit 2 n=6 Tax=Caulobacteraceae RepID=B8H5D8_CAUCN Length = 331 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 86/234 (36%), Gaps = 28/234 (11%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 + L P + +I I +++ + R + K + +SH+ Sbjct: 62 GAIDLQPAASELKHHAIWFHDWILMPIITAITLLVLGLLIWIVVRYNKKANPVAAKFSHN 121 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 +E + VP+LI++ +A+ +++ + +T++ W W + YP+Q Sbjct: 122 TTIEVIWTVVPVLILMVIAIFSFRLLFHYN-----DMPKPDLTVKATGYQWYWGYEYPDQ 176 Query: 146 GIATV------NEIAFPANTPVYF----------------KVTSNSVMNSFFIPRLGSQI 183 ++ + E A P +VT+ V+++F +P G + Sbjct: 177 KVSEIISLPLTKEQAEAKKVPYLLAADNAMVVPVNKVVRVQVTAADVIHAFALPAFGLKT 236 Query: 184 YAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 A+ G A+ G + G + G + M + I +A FD WV Sbjct: 237 DAIPGRLNETWFKADRTGVFYGQCSELCGVDHAFMPIE-IKVVTQAEFDAWVKA 289 >UniRef50_B8GPT4 Cytochrome c oxidase subunit 2 n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPT4_THISH Length = 380 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 92/264 (34%), Gaps = 29/264 (10%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALL-------DPKGQIGLEQRSLILTAFGLMLIVV 55 R ++SL +L + + P E + + G+ I++ Sbjct: 5 KRSRSRSLLAAALAVTGFGATAAADEVQRWGINFPPPASTTAQEIYDIHMLTMGIATILL 64 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHAL 114 + + + +R S + H W VP++++ + L Sbjct: 65 VIIFAVVIYSLIVHRKSRG--YPADQRFHETWFGRWSWVFVPVMVLGVDLTIAGAAQKTL 122 Query: 115 EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI------------------ATVNEIAFP 156 E + D+ + ++V+ W W F+Y + + N + P Sbjct: 123 ERVWVVPQDQPLLDVKVIGHQWYWEFVYLDHDVKIESRYVPKEEAGIHYLREVDNRLVLP 182 Query: 157 ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 + V F T++ V+++F++P L + A+ G T + G + G A G + Sbjct: 183 THQRVRFLHTASDVLHAFWVPELAVKKDAIPGYVTETWVNLTREGVFRGQCAELCGTWHA 242 Query: 217 GMKFKAIATPDRAAFDQWVAKAKQ 240 M + + + FD W+ + KQ Sbjct: 243 RMPI-VVESVSQERFDAWIEEQKQ 265 >UniRef50_Q47G11 Cytochrome c oxidase subunit 2 n=2 Tax=Betaproteobacteria RepID=Q47G11_DECAR Length = 401 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 92/258 (35%), Gaps = 38/258 (14%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNW 82 +G + +P I E +L + +++I + ++ A+ R + Sbjct: 37 AGYSFNFPEPVTPIARE--TLHIHNEFMLIITTLFVVVFAIMIYSMIRHRKSSGHQPSKF 94 Query: 83 SHSNKVEAVVW-TVPILIIIFL-----AVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 S W +P I++F+ + + +E +K + + ++V M W Sbjct: 95 SGPTGALQWFWALIPFAILLFIDFVLMGIPAVQAIINMEDTK----TKADLVLKVTGMQW 150 Query: 137 KWFFIYPEQGIATVNEI-------------------------AFPANTPVYFKVTSNSVM 171 KW + YPE G+ ++ + P V +TS V+ Sbjct: 151 KWQYEYPEAGVKFISTLATPRDQITNAEAKGEHYLLEVDKPVVLPVGKKVRVLLTSIDVI 210 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF 231 +++++P+ G + A+ G ++ +PG Y G A G M A P+ + Sbjct: 211 HTWWVPQFGVKRDAIPGFLRETWVLIEKPGIYRGQCAELCGKDHGFMPVVVHAVPEP-EY 269 Query: 232 DQWVAKAKQSPNTMSDMA 249 W+ K + A Sbjct: 270 LAWLEAQKAEAKATAGGA 287 >UniRef50_C7P0B0 Cytochrome c oxidase subunit 2 n=3 Tax=Halobacteriaceae RepID=C7P0B0_HALMD Length = 249 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 30/256 (11%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA---- 62 +G ++LF + A+ E LI +L V IP ++ Sbjct: 3 RHRVGLVALFGAIAFAALTQPAVAQ---TSASETSELIWGLNMNLLYVAIPITVLVEGIL 59 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI-LIIIFLAVLTWKTTHA----LEPS 117 + W++ +++ P + N+ + WTV +I++F+ V +++ + + Sbjct: 60 IYTVWRFSKNDE-----PLPTMENRRLEITWTVATAIILLFVGVASYQVMAEPMVTAQST 114 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE------------IAFPANTPVYFKV 165 + L E+P+ +EVV+ + W F Y T E + PAN V V Sbjct: 115 QQLDTSEEPLEVEVVAQKYAWTFNYNGTAANTSQEYSADNRLSNGGTLVLPANRTVRLSV 174 Query: 166 TSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIAT 225 TS +++F +P L + AM G + E GTY A Y G G S M + Sbjct: 175 TSTDWLHAFHVPGLALKQDAMPGQHNTIQTRVTETGTYQLYCAEYCGSGHSQMLGEVRVL 234 Query: 226 PDRAAFDQWVAKAKQS 241 P + + WV + S Sbjct: 235 P-QDEYQNWVEDQQSS 249 >UniRef50_Q5V3P5 Cytochrome c oxidase subunit 2 n=1 Tax=Haloarcula marismortui RepID=Q5V3P5_HALMA Length = 240 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 97/256 (37%), Gaps = 29/256 (11%) Query: 1 MRLRKYNKSLGW----LSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 MRLR+ G LSL A V N A +D L+ A L L V + Sbjct: 1 MRLRRRVLQAGLVVVGLSLLAAPVTAQSVNRAAID------DLNEQLLYVALPLTLFVEL 54 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI-LIIIFLAV--LTWKTTHA 113 + + YR N D P + + V WT I++F+ V Sbjct: 55 TLVYVI------YRFRNNDD---PKPTVDDPALEVTWTAATGAILVFVGVSAFVVMANPY 105 Query: 114 LEPSKPLAHD------EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTS 167 + P+ A + I+V++ W W F Y E + T + PA+ V F++ + Sbjct: 106 ITPAAAEASAGGGDAFAEDTQIDVLAYQWGWEFSYGEASVTTEERLVLPADKNVTFRLRT 165 Query: 168 NSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPD 227 V+++ +IP+LG + G A EPG Y A G G S M + + Sbjct: 166 TDVIHAIYIPQLGVKQDIFPGRTMTARTHATEPGEYRLYCAEMCGAGHSKMD-ATVVVKN 224 Query: 228 RAAFDQWVAKAKQSPN 243 ++ +D W+ + Sbjct: 225 QSGYDAWMENQTTAAG 240 >UniRef50_A7BSH7 Cytochrome c oxidase aa3, subunit II n=1 Tax=Beggiatoa sp. PS RepID=A7BSH7_9GAMM Length = 256 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 14/206 (6%) Query: 41 RSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILI 99 + + ++ I ++ + F +KYR N+D + +P S A+ WTV PI + Sbjct: 46 DYVWYEVIIDISLIGILFSIVTLYFMFKYRRRNEDDEGNPPRMTST--LAIGWTVIPIFL 103 Query: 100 II----FLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAF 155 I+ FLA W +A + + I++ S + W + YP G+ T NE+ Sbjct: 104 IMADDFFLAAQGWDLWNAYRQV-----PAERMEIQLESGMYSWDYTYPN-GVETQNELIV 157 Query: 156 PANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGF 215 PA TP+ ++TS ++S FIP + +M G T L EPG + A Y G Sbjct: 158 PAGTPIMLRMTSRDTLHSHFIPDFRVKEDSMPGRITYLWFYPQEPGEHQVTCAEYCGIMH 217 Query: 216 SGMKFKAIATPDRAAFDQWVAKAKQS 241 S M K I A F+QW + + Sbjct: 218 SYMVGKVIVK-SEADFNQWYNQEAAN 242 >UniRef50_Q06474 Cytochrome c oxidase subunit 2 n=48 Tax=root RepID=COX2_SYNY3 Length = 332 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 106/316 (33%), Gaps = 48/316 (15%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQI-GLEQRSLILTAFGLMLIVVIPAI 59 M++ +L + L G N L+ + + + + + Sbjct: 1 MKIPGSVITLLIGVVITVVSLWYGQNHGLMPVAASADAEKVDGIFNYMMTIATGLFLLVE 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 + V ++R D P + +E + +P +I+ LAV +++ + L P Sbjct: 61 GVLVYCLIRFRRRKDDQTDGPPIEGNVPLEILWTAIPTVIVFTLAVYSFEVYNNLGGLDP 120 Query: 120 LAHDEK------------------------------------------PITIEVVSMDWK 137 + P+ ++V + + Sbjct: 121 TISRDNAGQQMAHNHMGHMGSMGNMVAMAGDGDVALGIGLDSEEQGVNPLMVDVKGIQYA 180 Query: 138 WFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197 W F YPE GI + E+ P + PV + + V+++F+IP+L + + G + L A Sbjct: 181 WIFTYPETGIIS-GELHAPIDRPVQLNMEAGDVIHAFWIPQLRLKQDVIPGRGSTLVFNA 239 Query: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAP 257 + PG Y I A G GMK +D WVA +P M + A Sbjct: 240 STPGQYPVICAELCGAYHGGMK-SVFYAHTPEEYDDWVAANAPAPTESMAMTLPKATTA- 297 Query: 258 SEYNQVEYFSNVKPDL 273 EY + ++ Sbjct: 298 --MTPNEYLAPYAKEM 311 >UniRef50_B2S9W4 Cytochrome c oxidase subunit 2 n=61 Tax=Alphaproteobacteria RepID=B2S9W4_BRUA1 Length = 372 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 96/266 (36%), Gaps = 39/266 (14%) Query: 31 DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEA 90 D I + ++ + + + + V ++RAS P+ + N Sbjct: 116 DAATGIAEQIHWFERYTLWFIIPITLLVLGLLVWVVLRFRAS---VNPEPSKTSHNTAIE 172 Query: 91 VVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--- 146 V+WTV P++I++FLAV +++ + + ++ +T++ W W + Y Sbjct: 173 VIWTVGPVIILLFLAVPSFQLL-----TAQYSPEDPTLTVKATGYQWYWGYEYQVDNPVS 227 Query: 147 -------------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGS 181 + NE+ P V VT++ V++S+ IP G Sbjct: 228 FDSVILKDDDRAAAGKEDRARYSRLLTVDNEVVVPVGETVRLLVTASDVIHSWTIPAFGV 287 Query: 182 QIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 ++ A+ G A++ G Y G + G M + + W++ A + Sbjct: 288 KMDAVPGRINETWFKADKEGLYYGQCSELCGKDHGFMPIAVRVV-SKDQYQNWLSAA-AT 345 Query: 242 PNTMSDMAAFEKLAAPSEYNQVEYFS 267 ++ A + S ++V Sbjct: 346 DLPGANKALLQAEGEGSANDKVAAAG 371 >UniRef50_D2UBE6 Putative cytochrome c oxidase, subunit II protein n=1 Tax=Xanthomonas albilineans RepID=D2UBE6_XANAL Length = 330 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 95/266 (35%), Gaps = 42/266 (15%) Query: 10 LGWLSLFAGTVLLSGCNSALLDP------KGQIGLEQRSLILTAFGLMLIVVIPAILMAV 63 G + T L+ +A P +G + L + VVI ++ Sbjct: 14 AGMALVAVVTAPLAWAQAADPKPWQLNMGRGVTQSAHNAYAAHMLALWVCVVIGVLVFGA 73 Query: 64 GFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD 123 + ++H+ K E V +P+LI+I +A A+ ++ Sbjct: 74 MAYALFTFRKSKGVVPAQFTHNTKAEIVWTVIPVLILIVMAWPATAKLIAMYDTR----- 128 Query: 124 EKPITIEVVSMDWKWFFIYPEQGIA------------------------------TVNEI 153 + +T+++ W W + Y + ++ N + Sbjct: 129 DAEMTVKITGYQWMWRYEYLGENVSFTSRLARSSDRMRQSGAVPTVEHDPHYLLDVDNRL 188 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 P NT V F +T++ V++++++P LG + A+ G+ + PG Y G A G Sbjct: 189 VLPVNTKVRFLITADDVIHAWWVPALGWKQDAIPGIVNEAWTSIDTPGVYRGQCAVLCGK 248 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAK 239 M A ++ F +W+A K Sbjct: 249 DHGFMPIVVEAM-NKQDFRKWLASRK 273 >UniRef50_D0LN58 Cytochrome c oxidase, subunit II n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LN58_HALO1 Length = 389 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 28/222 (12%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS-------------------N 73 + E +L L+ + F +YR S + Sbjct: 18 ASSVAGEIDALHYVVILTSLLGSAAVSAAVLYFLVRYRRSAQVAAADSDADSDADSAAQH 77 Query: 74 KDAKYSPNWSHSNKV-EAVVWTVPILIIIFLAVL-TWKTTHALEPSKPLAHDEKPITIEV 131 D + +P+ + + +++ L + W + E + + V Sbjct: 78 ADVRPAPSRRRGMPLALEI-----AVVLGLLGMFVGWWVIGFRQFVNLRTAPEDAMRVYV 132 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 W W F YP+ G A+ + PA PV ++S V++SF++P + A+ G Sbjct: 133 TGKKWMWSFAYPD-GQASNAVLYVPAGQPVELLLSSRDVIHSFYVPAFRLKHDAVPGRMN 191 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 + A +PG Y + A Y G G + M+ + + A + Sbjct: 192 SMWFEAEKPGVYPILCAEYCGDGHATMRGQVVVLA-PADYQA 232 >UniRef50_B3CN60 Cytochrome c oxidase subunit 2 n=7 Tax=Wolbachia RepID=B3CN60_WOLPP Length = 254 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 29/215 (13%) Query: 46 TAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAV 105 +M+ +++ + +++R +H+ VE + + +P +I+ LA Sbjct: 45 FVMSVMIAIMLFVWALLAYVVFRFRKGKVKN--VSKITHNIFVEIIWFVIPTIIVGVLAF 102 Query: 106 LTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE-QGI----------------- 147 + L+ P A IT++V+ W W + YPE QGI Sbjct: 103 KNAELI-KLQEKVPKA----DITLKVIGHQWYWSYKYPEYQGISFDSYIKGKEDLTERDL 157 Query: 148 ---ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYD 204 + N + P NT + +VT+ V++S+ IP G +I A+ G +PG Y Sbjct: 158 KLFSVDNNVILPINTNIRLQVTAGDVIHSWGIPAFGIKIDAIPGRLNEAWFNVTKPGIYY 217 Query: 205 GISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G G G M A + F++W+ K Sbjct: 218 GQCYELCGQGHGFMPIVVEAV-SKEDFNKWIEDKK 251 >UniRef50_A9BE64 Cytochrome c oxidase subunit 2 n=25 Tax=cellular organisms RepID=A9BE64_PROM4 Length = 291 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 84/239 (35%), Gaps = 30/239 (12%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 L F + ++ + + V ++R + +E Sbjct: 52 ASSNAPIYDELFKVLFIIGTLLFFGMLGLVVYSLIQFRRKPGQTGDGLAIEDNLPLEIFW 111 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP-------------------------- 126 VP ++I+F+ + ++ + + L + + Sbjct: 112 TAVPAIVILFVGLYSYDIYERMGGMESLGANNQHHHQMASKQRIWGGIGSKDKSMQGANG 171 Query: 127 --ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 I +EV +M + + F YP+ I + E+ P PV K+ S V+++F++P + Sbjct: 172 TLIPVEVTAMQFAFLFHYPDGDIIS-GELHVPIGQPVTMKMESKDVIHAFWVPEFRLKQD 230 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPN 243 + G T L+ G Y I A GP GM+ + + + W AK + P+ Sbjct: 231 VIPGQPTILNFTPTRVGKYPIICAELCGPYHGGMR-STVVVEELEDYQNWFAKNAKKPD 288 >UniRef50_Q07JU2 Cytochrome c oxidase, subunit II n=6 Tax=Alphaproteobacteria RepID=Q07JU2_RHOP5 Length = 560 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 18/240 (7%) Query: 11 GWLS---LFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 W + + A +LL+GC + LDP G + L + +++ L+ Sbjct: 331 AWFTASIVAATGMLLAGCGGPLSALDPAGPAAVAIAELW---WVMLIGAAALFALVMALL 387 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 W + + SP + + LA L E P Sbjct: 388 LWAFVRPSTGTAGSPKLWLVGGGLLLP-------ALVLAPLLAYALSTGERLLPHPVASD 440 Query: 126 PITIEVVSMDWKWFFIYPE--QGIA-TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 + I+V + W+W F YPE +G+ ++N + P P+ +V+S V++SF++PRLG + Sbjct: 441 TLRIDVEARQWQWTFRYPEDREGVGLSINTLHIPVGRPIDLRVSSADVIHSFWVPRLGGK 500 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 I A+ G R+ L A++ G Y G+ A + G + M+F A P A D+ A + P Sbjct: 501 IDAIPGHVNRIRLSASQAGIYRGVCAEFCGTEHTRMEFSVEAHPPEAYRDRLRALPQAPP 560 >UniRef50_D1ATW6 Cytochrome c oxidase subunit 2 n=9 Tax=Anaplasmataceae RepID=D1ATW6_ANACI Length = 297 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 86/236 (36%), Gaps = 27/236 (11%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 +P +I +M V + + ++R + N + N Sbjct: 68 GFQEPATEIMELVAKSHDYVMLVMSAVAAVVFSVMLYTLVRFRRRKGEQVEFNNKNSHNV 127 Query: 88 VEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 V+WT VP++I+ FL + K K + I I+ + W W ++YPE G Sbjct: 128 ALEVMWTLVPLVIVGFLTISNVKLI-----KKEQQIPKADIVIKAIGYQWYWTYVYPESG 182 Query: 147 I--------------------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + N + P V + T+ V++S+ +P LG ++ A+ Sbjct: 183 VRFDSYMKPDSELESGELRLLEVDNRMVVPVGEVVLLQSTAGDVIHSWAVPALGIKVDAV 242 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 G + +PG Y G + G M A R FD WVA+ K+S Sbjct: 243 PGRLNEVWFSVKKPGVYYGQCSELCGRLHGFMPIVVEAV-TRDKFDAWVAQHKESS 297 >UniRef50_Q47R64 Cytochrome c oxidase subunit 2 n=4 Tax=Streptosporangineae RepID=Q47R64_THEFY Length = 314 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 33/268 (12%) Query: 23 SGCNSALL------DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA 76 +GC S +P + +L ++ V I + + YR ++ Sbjct: 31 TGCASNEFTRLGLPEPITEQAERVVTLWQGSWVAAFAVGILVWGLIIWSVIAYRKRSEQ- 89 Query: 77 KYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKT-THALEPSKPLAHDEKPITIEVVSMD 135 P ++ +EA+ +PI+++ L T + T+ LE +P + ++V + Sbjct: 90 -LPPQVRYNMPIEALYTVLPIIVVSVLFYFTARDQTYLLETDEPAD-----VYVDVNAFQ 143 Query: 136 WKWFFIY----------------PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 W W F Y P + + P+++ V+F + + V++SF+IP Sbjct: 144 WSWQFTYEDELDVNGNPVSVAGVPSTSKDELPVLVLPSDSVVHFDLEAPDVIHSFWIPAF 203 Query: 180 GSQIYAMAGMQTRLH--LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 ++ + G + G Y+G A G S M F + W+ + Sbjct: 204 AFKLDVIPGHPNEFQVKIKPGVEGDYEGRCAELCGYDHSRMLFTLRVV-TPEEYRAWIEE 262 Query: 238 AKQSPNTMSDMAAFEKLAAPSEYNQVEY 265 K +P + + E+ A Sbjct: 263 QKANPQELPAVPDLEEEAPAPNPGPATA 290 >UniRef50_P24011 Cytochrome c oxidase subunit 2 n=13 Tax=Bacillales RepID=COX2_BACSU Length = 356 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 15/238 (6%) Query: 23 SGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 SGC + L P G++ +Q L + + +M++VV ++ ++R S Sbjct: 19 SGCGKPFLSTLKPAGEVADKQYDLTVLSTLIMVVVVAVVSVIFFYVIVRFRRSRVGENTI 78 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWK-TTHALEPSKPLAH----DEKPITIEVVSM 134 P NK + WTV ++++ + V+ T L + P+ E + + V + Sbjct: 79 PKQVEGNKFLEITWTVIPILLLIILVIPVVLYTLELADTSPMDKKGRKAEDALVVNVRAN 138 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 + W F YP+ GI T E+ P + VYF + ++ V +SF+IP +G ++ + + Sbjct: 139 LYWWEFEYPDYGIITSQELIVPTDQRVYFNLKASDVKHSFWIPSVGGKLDTNTDNENKFF 198 Query: 195 LIAN-----EPGT-YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 L + E G + G A GP + M FK T F W + K +T Sbjct: 199 LTFDSKRSKEAGDMFFGKCAELCGPSHALMDFKVK-TMSAKEFQGWTKEMKNYKSTAE 255 >UniRef50_D1BTQ6 Cytochrome c oxidase subunit 2 n=2 Tax=Micrococcineae RepID=D1BTQ6_XYLCX Length = 304 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 97/287 (33%), Gaps = 43/287 (14%) Query: 5 KYNKSLGWLSLFAGTV--LLSGCNSALLD-------PKGQIG---LEQRSLILTAFGLML 52 + +++ + AG V L SGC S + G++ SL + ++ L Sbjct: 8 RATRAILRATAIAGAVAVLASGCASDTVKRGYLPGYADGEVTNRTEGITSLWVGSWVAAL 67 Query: 53 IVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTH 112 V + + + YR D + + +E + VP+ +++ L T + Sbjct: 68 AVGLITWGLMLWCVAAYRKRRDDDQLPVQTRYHVPLELMYVIVPLAMVLVLFYHTDRVMT 127 Query: 113 ALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI------------------------- 147 + E + ++V+ W W F Y + G+ Sbjct: 128 EVTSV----SGEADVHVQVIGKQWSWDFNYLDDGVYDTGQHLIDVGGQTAEDQLDGAPGT 183 Query: 148 -ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 + + P V F + S V++SF+IP + + G ++ GTY G Sbjct: 184 STALPTLYLPVGETVEFTLDSRDVIHSFWIPAFLYKQDMIPGHTNTFEVVPEREGTYAGK 243 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 A G SGM F RA +D + + + T + Sbjct: 244 CAELCGQWHSGMLFNVKVV-SRAEYDARMDELRALGQTGELGLDLNR 289 >UniRef50_A1SLF8 Cytochrome c oxidase subunit 2 n=1 Tax=Nocardioides sp. JS614 RepID=A1SLF8_NOCSJ Length = 324 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 99/289 (34%), Gaps = 45/289 (15%) Query: 4 RKYNKSLGWLSLF-AGTVLLSGCNSALL---------DPKGQIGLEQRSLILTAFGLMLI 53 R + + L+ G ++L GC+S DP + G + +L A+ L+ Sbjct: 27 RGTARRVAALAAIGVGVLVLGGCSSETQGEWKRLAMPDPASEQGEQVLNLWQGAWIAALV 86 Query: 54 VVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTH 112 + + W++R ++D P + N + +T+ PI+++I T K + Sbjct: 87 TGVIVWGLIFYAIWRFRRRSEDE--IPVQTRYNLPLEIFYTIAPIIMVIVFFAHTVKVQN 144 Query: 113 A-LEPSKPLAHDEKPITIEVVSMDWKWFFIYP------------------------EQGI 147 A L+ P+ + TIEVV W W F Y E G Sbjct: 145 AILDDDLPVDN-----TIEVVGQQWSWTFNYGIGEQDASANDDATDDVFAYSSYVHEAGT 199 Query: 148 AT-VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 + + + P F + S V++ +P ++ + G + G Y G Sbjct: 200 GSYIPTLVLPVGETTRFNLHSPDVIHDLSVPAFLLKMDVVPGRVNHYEITPTRIGEYAGK 259 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLA 255 G S M F + ++ + + + T + A Sbjct: 260 CFELCGVYHSRMLFNVKVV-SADDYQTYLQQLQDAGATSQAPLLGGEYA 307 >UniRef50_P98054 Cytochrome c oxidase subunit 2 n=4 Tax=Cyanobacteria RepID=COX2_THEVL Length = 327 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 86/256 (33%), Gaps = 55/256 (21%) Query: 37 GLEQRSLILTAFGLMLIV----VIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 EQ L+ F +ML + + + F +YR + + +EA Sbjct: 35 ASEQAPLVDNFFDIMLTIGTALFLVVQGAIILFVIRYRRRAGEEGDGLPVEGNLPLEAFW 94 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHD----------------------------- 123 +P LI+IFL + + + P H Sbjct: 95 TAIPALIVIFLGIYSVDIFQRMGGLNPGDHAMHSMHAPKSGMAVVAQAPSKTTSDATALL 154 Query: 124 -------------------EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFK 164 + ++V M + W F YP+ GI + E+ P V Sbjct: 155 AAAQPPEIGIGASPDVQGKAPDLVVDVAGMQYAWIFTYPDSGIVS-GELHIPVGKDVQLN 213 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA 224 +++ V++SF++P+ + A+ G+ T A + GTY + A G M+ + I Sbjct: 214 LSARDVIHSFWVPQFRLKQDAIPGVPT-TRFKATKVGTYPVVCAELCGGYHGAMRTQVIV 272 Query: 225 TPDRAAFDQWVAKAKQ 240 F+ W + + Sbjct: 273 H-TPEDFETWRRQNQA 287 >UniRef50_A3ZTG0 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTG0_9PLAN Length = 252 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 86/215 (40%), Gaps = 14/215 (6%) Query: 41 RSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILI 99 L L +V I + W+Y + +SH + V+W++ P ++ Sbjct: 31 DHLFYVILYLTGVVFIGTGAVLFWILWRYDGATNADPVV--FSHGSHALEVIWSILPAVV 88 Query: 100 IIFLAVLTWKTTHALEPSKPLAHDE--KPITIEVVSMDWKWFFIYPEQ--------GIAT 149 ++F+A+ +P D KP V ++W YP + + Sbjct: 89 LLFIAIYQMDAWAGARMRRPTMADGAIKPPLCRVTGRQFEWRIQYPGEDGRLDTPDDLHV 148 Query: 150 VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 +N++ P + + ++ S V++SFF+P + + + GM+ + + G D + A Sbjct: 149 LNDLHVPVDEEIVIEIESMDVLHSFFLPNMRVKQDVVPGMRQYVWFHPVKEGVSDIVCAE 208 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 G G M+ + I + A FD+W + A T Sbjct: 209 LCGWGHYKMRGR-ITVDNAAEFDRWYSAAYAEQET 242 >UniRef50_C9YTU0 Cytochrome c oxidase subunit 2 n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YTU0_STRSW Length = 330 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 98/302 (32%), Gaps = 57/302 (18%) Query: 4 RKYNKSLGWLSLFAGTVLLS--GCNSALLD------PKGQIGLEQRSLILTAFGLMLIVV 55 R+ + ++ AG VL + GC P + SL ++ L Sbjct: 22 RRPMRRKLLQAMTAGLVLATATGCTWEDFPRLGMPTPTTEEAPRILSLWQGSWAAALATG 81 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + + A+ +R S + P ++ +EA+ VP++I+ L T + L Sbjct: 82 VLVWGLILWSAFFHRRSRTKVEVPPQTRYNMPIEALYTVVPLIIVSVLFYFTARDESKLL 141 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQ------------------------------ 145 + + +T+ VV W W F Y E Sbjct: 142 DT----SKKPDLTVNVVGFQWSWCFNYIENVEGSTGDAATDKNLAAIPNRYKEDFPANAG 197 Query: 146 GIATVN--------------EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 G+ T + P V F +TS V++SF++ + + G Sbjct: 198 GVYTCGIPGDKNPQTGNPGPTLWLPKGKTVRFVLTSRDVIHSFWVVPFLMKQDVIPGHTN 257 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 + N+ GT+ G A G S M F +++ + + T A Sbjct: 258 AFQVTPNQEGTFLGKCAELCGVDHSRMLFNVKVV-SPERYEEHLKSLVEKGQTGYVPAGI 316 Query: 252 EK 253 E+ Sbjct: 317 EQ 318 >UniRef50_C7QBL1 Cytochrome c oxidase subunit 2 n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QBL1_CATAD Length = 287 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 84/261 (32%), Gaps = 28/261 (10%) Query: 17 AGTVLLSGCNSALL------DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 + +GC++ P + L ++ L V + + YR Sbjct: 4 LVALTATGCDAGQFKRLGVPQPATKEAPIILHLWQGSWIAALAVGALVWGLILWCVIFYR 63 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIE 130 + ++ +E + VP ++I L T K L H + I Sbjct: 64 RKRTGIEIPAQTRYNVPIEVLFTVVPFIMIAVLFFFTAKDESKLLAL----HKNPDVKIN 119 Query: 131 VVSMDWKWFFIYPEQGIATVNE-----------------IAFPANTPVYFKVTSNSVMNS 173 VV W W + Y ++ + + P N V F +TS V++S Sbjct: 120 VVGRQWSWSWNYNYDAVSQQDTPGQLAVYDAGTPADLPVLWLPVNERVRFTLTSTDVIHS 179 Query: 174 FFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 F++P ++ + G L ++ G + G A G S M FK A + Sbjct: 180 FWVPNFLFKLDVVPGRVNEFELTPSKEGEFIGRCAELCGVDHSRMLFKVKVV-SAADYQN 238 Query: 234 WVAKAKQSPNTMSDMAAFEKL 254 + + ++ +L Sbjct: 239 HLKALASKIDPVTGKGQTGQL 259 >UniRef50_D0LJA9 Cytochrome c oxidase subunit 2 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJA9_HALO1 Length = 358 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 35/246 (14%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 L D S+ F L + I + V F KYRA K P+ H+ Sbjct: 29 TVWLPDAASVTSPAVDSMWDIVFWLSVFCFIAITGVVVYFVIKYRARPG-HKAQPSPHHN 87 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 + +E + +P LI + L + W+ + + E + ++VV+ W W F++P Sbjct: 88 DVMETIWTVIPALICVGLFIGGWRGFVDV-----TSPPEHALEVQVVARSWSWEFVHPNG 142 Query: 146 GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA-------- 197 +V + PA+ V + S V++SFF+P + + T+ A Sbjct: 143 VKDSV--LHVPADRSVRLIMKSEDVIHSFFVPAFRIKQDVLPRRYTQTWFKAPDPTLSRE 200 Query: 198 -----------------NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 +PG Y G S MK + + ++ ++A ++ Sbjct: 201 QELPSTEVNPANAKLVREQPGL-RVFCTEYCGREHSMMKTRVVVHNS-GGYENYLAFKQE 258 Query: 241 SPNTMS 246 + MS Sbjct: 259 QQDAMS 264 >UniRef50_B9KJJ8 Cytochrome c, monoheme n=5 Tax=Alphaproteobacteria RepID=B9KJJ8_RHOSK Length = 324 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 105/283 (37%), Gaps = 30/283 (10%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +R ++ L + + +GC ++ G L+ L +++ V+ + Sbjct: 1 MRARYRAGVGLLILTIS---AGCGGPQSVFSAGGADALQINRLF---TVMLVGAVLLWLS 54 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILI--IIFLAVLTWKTTHALEPSK 118 + F + R P EAV+ I++ ++ ++L+W + + Sbjct: 55 LNGLFLYVTRRR-------PGRMSRKLAEAVIIGGGIVLPLVVLTSLLSWGLSIMPDQRA 107 Query: 119 PLAHDEKPITIEVVSMDWKWFFIY----PEQGIATVNEIAFPANTPVYFKVTSNSVMNSF 174 P + + + ++ W Y E+ + + NE+ PA ++ + V++SF Sbjct: 108 PGEG----LRVRITGEEFWWRVDYYPPGSEEPVVSANELRLPAGRRTEIELLAGRVIHSF 163 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 ++P LG + + G TR+ L PG Y G A + G + M AI + A F +W Sbjct: 164 WVPGLGGKTDMIPGRTTRMSLEPVTPGIYRGQCAEFCGASHALMAMNAIVL-EEAEFARW 222 Query: 235 VAKAK--QSPNTMSDMAAF--EKLAAPSEYNQVEYFSNVKPDL 273 + A F E A V PDL Sbjct: 223 LEAEAGPARAPEGEGRAIFLREGCGACHAVRGTPAAGVVGPDL 265 >UniRef50_D2QS53 Cytochrome c oxidase subunit II n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QS53_9SPHI Length = 373 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 92/261 (35%), Gaps = 51/261 (19%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNK-DAKYSPNWSHSNKVEAV 91 G +L + ++ + + FAW Y+ A Y P ++K+E + Sbjct: 77 SSPHGRRTDNLFWISMAMITAAFVLTNALLFIFAWMYQHKEGYKAAYYP---ENHKLELI 133 Query: 92 VWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE------- 144 VP +I+ + W+ + P E+V + W YP Sbjct: 134 WTIVPAVIMAVMVFTGWRAWRDIMAEAP----ANAQVFEIVGKQFNWIARYPGVDNNKLG 189 Query: 145 -----------------------QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGS 181 + +E+ PAN PV K+ + V++S FIP L Sbjct: 190 SFNYKLIDNNNETGIDYTDEASFDDFVSTSELHIPANKPVLLKIRARDVLHSVFIPHLRV 249 Query: 182 QIYAMAGMQTRLHLIANEP------------GTYDGISASYSGPGFSGMKFKAIATPDRA 229 ++ A+ GM TR IA++ TY+ G G M+ + + D A Sbjct: 250 KMDAVPGMPTRFWFIADKTTDEMRNITGNPDFTYEIACTEVCGQGHFSMRIR-LVVEDEA 308 Query: 230 AFDQWVAKAKQSPNTMSDMAA 250 A++ W + K + ++A Sbjct: 309 AWEAWCKQQKPLLTSTPELAT 329 >UniRef50_A0LTG9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTG9_ACIC1 Length = 280 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 91/263 (34%), Gaps = 32/263 (12%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSALLD----PKGQIGLEQRSLILTA--FGLMLIVV 55 R R +G L G L SGC + L P QR L L + L V Sbjct: 20 RRRSVVVRIGLLVALVG--LTSGCTANDLPRLGMPTPITAQAQRVLRLWQGGWAAALFVG 77 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + YR D +P +++ +E + VP++ + T + + + Sbjct: 78 CIVWGLIIWCVIAYRKR--DGAQAPQTTYNVPIEVLYTVVPVIFVAVFFYFTARDENYVT 135 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIY-----PEQGIATV----------NEIAFPANTP 160 +T+EVV W W F Y P+ I + PA Sbjct: 136 ----KLSAHPDVTVEVVGYQWDWQFNYLSGPQPDAPIVAQVTGDAAHGHPATLELPAGET 191 Query: 161 VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL--HLIANEPGTYDGISASYSGPGFSGM 218 V FK+ S V+++F++P + + G + H+ A++ GTY G G M Sbjct: 192 VRFKLVSPDVIHAFWVPNFLFKRDVIPGRMSEFDVHIDADKQGTYIGRCTELCGLYHDQM 251 Query: 219 KFKAIATPDRAAFDQWVAKAKQS 241 F D + + K Sbjct: 252 IFYVKVV-DPVTYQHDLETMKAQ 273 >UniRef50_A1ZL76 Cytochrome c oxidase subunit 2 n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZL76_9SPHI Length = 305 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 85/243 (34%), Gaps = 49/243 (20%) Query: 37 GLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV- 95 G + SL ++ ++LI+ + FA++YR ++ ++ N + WT+ Sbjct: 32 GQQTDSLFWSSTVVILIMFVITNAALFYFAFRYRYKKENKA---SFFPENHKLEIAWTIT 88 Query: 96 PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--------- 146 P +I+ L K + P + +E+V + W YP + Sbjct: 89 PAIILTVLVFYGNKVWWDIMGEVPKDAE----VVEIVGQQFAWKTRYPGKDKKMGNYDYR 144 Query: 147 -IATVNE------------------IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 I NE + P N P+ FK+ + V++S F P ++ A+ Sbjct: 145 LIDATNELGIDFGHKDANDDFVSGKLVLPVNRPILFKIRAKDVLHSVFAPHFRLKMDAVP 204 Query: 188 GMQTRLHLIANEP------------GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 GM T+ H + Y+ G G M+ + A + +W Sbjct: 205 GMPTQFHFTPTKTTAQMRSELGNPKFNYEIACTEICGKGHYSMRLLVEVV-EEAEYKKWY 263 Query: 236 AKA 238 A Sbjct: 264 ASQ 266 >UniRef50_A8UU91 Cytochrome c oxidase subunit 2 n=3 Tax=Aquificaceae RepID=A8UU91_9AQUI Length = 272 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 91/256 (35%), Gaps = 37/256 (14%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILM-AVGF 65 + LG L L A L P + LI + + +V+ + + ++ F Sbjct: 2 KRVLGLLLLSAFAFAGEANADVLARPY-----DLWELIYKIWLFLSVVIYAVVAIPSLIF 56 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 KYR + + + +WT VP++I+++LA + + E Sbjct: 57 MVKYRYKPGEREVGDQEHEGHWGLEALWTIVPLIIVLYLATHGFALFTQMRKP-----PE 111 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATV------------------------NEIAFPANTP 160 + ++V + W W F YP + N + PA P Sbjct: 112 NAMELKVTAFAWGWMFQYPNGKMVIAQAIKDTEDKKCKPDECYSVDGVFQNYVYVPAGVP 171 Query: 161 VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF 220 + +TS V++SF++ G + G T N+PG Y Y G S M F Sbjct: 172 IKAVLTSQDVIHSFYVQPAGVTQDMVPGRTTYTWFQINKPGEYWVFCREYCGQWHSRM-F 230 Query: 221 KAIATPDRAAFDQWVA 236 + + FD+W+ Sbjct: 231 AMLKVVPKEDFDKWLK 246 >UniRef50_Q9X814 Probable cytochrome c oxidase subunit 2 n=21 Tax=Streptomyces RepID=COX2_STRCO Length = 319 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 96/304 (31%), Gaps = 57/304 (18%) Query: 4 RKYNKSLGWLSLFAGTVLLS--GCNSALLD------PKGQIGLEQRSLILTAFGLMLIVV 55 R+ + +L AG VL + GC P + SL ++ L Sbjct: 11 RRPMRRKLLQALTAGLVLATATGCTYEDFPRLGMPTPTTEEAPRILSLWQGSWAAALATG 70 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + + + +R S + P ++ +EA+ VP++I+ L T + L Sbjct: 71 VLVWGLILWSVFFHRRSRTKVEVPPQTRYNLPIEALYTMVPLVIVSVLFYFTARDESDLM 130 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQ------GIATVNEIA--------------- 154 + +T+ VV W W F + E T E+A Sbjct: 131 SLNK----KPDLTVNVVGFQWSWCFNHIEDVPGSTGDAKTSKELAGIPDRFIEDFPANAG 186 Query: 155 -----------------------FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 P V F +TS V++SF++ + + G Sbjct: 187 GVYDCGTPGTENPQTGNPGPTLWLPKGKTVRFVLTSRDVIHSFWVVPFLMKQDVIPGHTN 246 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 + N+ GT+ G A G S M F ++Q + + T A Sbjct: 247 AFEVTPNKEGTFLGKCAELCGVDHSRMLFNVKVV-SPERYEQHLQDLAKKGQTGYVPAGI 305 Query: 252 EKLA 255 + + Sbjct: 306 AQTS 309 >UniRef50_B4RAU6 Cytochrome c oxidase, subunit II n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RAU6_PHEZH Length = 327 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 89/254 (35%), Gaps = 32/254 (12%) Query: 37 GLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-- 94 +L FG+ L V++ + V W E ++W+ Sbjct: 30 AGLVATLSWVLFGMALAVLLMVSVALVVAL----------AGKSEWRDRLGREWLIWSAG 79 Query: 95 --VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG----IA 148 +PI+++ + + T AL + + + V W W Y + I Sbjct: 80 LALPIVVLTGVLIYGLTATQALSQAPQPGE----MRVRVTGEMWWWRVAYLDAEGRPAIH 135 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 NE+ PA PV ++ + V++SF++PRL ++ + G + L + A+ PG Y G A Sbjct: 136 DANELHIPAGVPVTLELEAADVIHSFWVPRLAGKLDMIPGRRNILRIQADRPGVYGGQCA 195 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK---------LAAPSE 259 Y G + M F +A F +W A P + A Sbjct: 196 EYCGGPHALMGFVVVAHA-PEDFQRWRAARLAPPPAAPADGLAARGAQVFRDSGCGACHR 254 Query: 260 YNQVEYFSNVKPDL 273 E PDL Sbjct: 255 VAGTEAGGLAGPDL 268 >UniRef50_C6VT36 Cytochrome c oxidase subunit 2 n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VT36_DYAFD Length = 370 Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 106/294 (36%), Gaps = 54/294 (18%) Query: 4 RKYNKSLGWLSLFAGTVLLSGC---NSALLDPKGQ--IGLEQRSLILTAFGLMLIVVIPA 58 K+N ++ + L G V ++ + P+ G L + G++ I I Sbjct: 43 NKFNGAMFIVVLLIGAVAITWSYLHSREYFLPEASSIHGRRTDDLFWFSMGILTIPFIIV 102 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 + F+WKY+ + + ++K+E + VP +++ L W+ + Sbjct: 103 NFLVFFFSWKYQHKKG--HRATFYPENHKLELIWTIVPAIVMALLVFTGWRAWSDITAEA 160 Query: 119 PLAHDEKPITIEVVSMDWKWFFIY-------------------PEQGIATV--------- 150 P + IE+ + W Y E GI Sbjct: 161 PRDAE----VIEITGKQFNWIARYGGVDNNKLGDYNYKLIDAQNEVGIDLSDENSFDDFT 216 Query: 151 --NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP-------- 200 +E+ P PV K+ + V++S FIP + ++ A+ G+ T+ +A++ Sbjct: 217 NPSEMHIPVGRPVLLKIRARDVLHSVFIPHMRVKMDAVPGLPTKFWFVADKTTADMRAET 276 Query: 201 ----GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 Y+ G G MK + I D A + +WVA+ +T + A Sbjct: 277 GNPKFDYEIACTEVCGQGHFSMKMRLI-VDDEATYKKWVAEQATFLSTYPEYLA 329 >UniRef50_C5CVJ0 Cytochrome c oxidase, subunit II n=1 Tax=Variovorax paradoxus S110 RepID=C5CVJ0_VARPS Length = 314 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 99/269 (36%), Gaps = 40/269 (14%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLML--IVVIPAILMAVGFAWKYRASNKDAKYSPN 81 G + L G + SL+ + L + V+ +++ + A ++R + Sbjct: 7 GAPQSALRAAGPVAQ---SLLEVSGVLAVGGAVIFAGVMLLLALAVRHRGGGRVNTR--- 60 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK------PLAHDEKPITIEVVSMD 135 W L+ LA T + S+ + + V Sbjct: 61 ----------WW----LLGGGLAFPTVVLSALFAHSEFHRPPWRPIPPPGALIVGVTGHM 106 Query: 136 WKWFFIY--PEQG--IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 W W Y P G + T NEI P PVYF + S V++SF++P LG ++ + G Sbjct: 107 WWWEVRYRDPASGAEVVTANEIRIPVGRPVYFGLGSADVIHSFWVPSLGGKMDMLPGRVQ 166 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV-------AKAKQSPNT 244 L L A PGT+ G A Y G + M +A + AAFD W+ A A + Sbjct: 167 HLLLQAGRPGTWRGQCAEYCGEQHARMALHVVAE-EPAAFDAWLAGQARPAAAASRELER 225 Query: 245 MSDMAAFEKLAAPSEYNQVEYFSNVKPDL 273 + + A V S + PDL Sbjct: 226 GREAFLAHRCNACHTVRGVSEQSRLGPDL 254 >UniRef50_Q3SQ74 Cytochrome c oxidase, subunit II n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SQ74_NITWN Length = 244 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 15/232 (6%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 L+ A +LSGC + LDP G +L F ++ + + Sbjct: 12 AARLRRRPLAGLASLTILSGCTGPLSALDPAGPAAASTATLWWIMFSGAAVLSLLMAALI 71 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH 122 K + WS + +++ ++ L+ L E Sbjct: 72 ALAFLK-------PGIASMWSSRSW---IIYGGLVMPGAVLSALLIAALVLGERMIVHPL 121 Query: 123 DEKPITIEVVSMDWKWFFIYPEQGIAT--VNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 ++ P+ + + W W F YP+ AT VN + PA PV VT+ V++SF++PRLG Sbjct: 122 EQPPLKVAAQARQWTWSFAYPDSRRATLSVNVLHIPAGEPVDVIVTTKDVIHSFWVPRLG 181 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFD 232 +I A+ G + + L A+ PG Y G+ A + G G S M+F +A + F Sbjct: 182 GKIDAIPGHRNVVRLQADRPGVYGGVCAEFCGAGHSAMRFTVLAH-EPEEFA 232 >UniRef50_A5G0I4 Cytochrome c oxidase subunit 2 n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0I4_ACICJ Length = 316 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 90/242 (37%), Gaps = 29/242 (11%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 I L+ +M VV L+ ++RAS + +H+ Sbjct: 44 EWWFQPAASPIQKSIDWLMQFVLWIMAGVVGLVGLLLAIVIIRFRASKH--PVATTTTHN 101 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 +E + VP L+++ + V + + + +T++V W W + YP Sbjct: 102 TLIEVIWTVVPALLLVVIFVPSLNLIYEQSNYT-----HRYMTVKVTGHQWYWEYDYPAA 156 Query: 146 G---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 ++ + + PAN + FK+TS V++SFFIP LG Q Y Sbjct: 157 KGVDFTSYPIPDNQIKPGQIARLSADHPLVLPANEKIVFKITSADVLHSFFIPSLGVQRY 216 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 A+ G + PG Y G G M + +A P + F W+A+AK Sbjct: 217 AIPGQYWHQWTKIDAPGIYYGECNQICGMNHDNMPIEIVALPLK-QFKAWLAEAKADAAQ 275 Query: 245 MS 246 + Sbjct: 276 GN 277 >UniRef50_UPI00016C5496 cytochrome c oxidase, subunit II n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5496 Length = 364 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 71/219 (32%), Gaps = 22/219 (10%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 + + L M +V + F +YR +P S ++E Sbjct: 11 ASTLADQFEFLFWYMSITMGLVGLGVYAALAYFCVRYRRGQGTGS-TPRILGSTRLELTW 69 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA---- 148 +P+ +FL W + A E + ++ W W Y Sbjct: 70 TIIPLF--VFLTFYAWGVMVYDHHTHAPADAE---EVFIIGKQWMWKAQYANGQRVIIGG 124 Query: 149 -----------TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197 ++ ++ P N PV +TS V++ F +P S++ + G T + Sbjct: 125 NPRNMTEAERNSIGKLVLPINRPVKLTLTSEDVIHDFGVPAFRSKVDVLPGRYTSVWYQP 184 Query: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 + G Y Y G S M K IA + +++ Sbjct: 185 TKLGEYHIYCDQYCGTWHSLMVGK-IAVVQEDEYRKFLQ 222 >UniRef50_C6XZ37 Cytochrome c oxidase subunit 2 n=2 Tax=Pedobacter RepID=C6XZ37_PEDHD Length = 408 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 47/262 (17%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 N L D + G + + L IV I ++ GFA+ Y+ S K Y + H+ Sbjct: 117 NMILPDAASEHGEKIDQMFNITLILTTIVFIATHILLFGFAYIYKHSGKRKAY--YYPHN 174 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 N +E V +P L++ L ++ + T ++ K + KPI+IE+ S + W YP Sbjct: 175 NTLERVWTIIPALVLTVLVLMGFLTWRSIF-YKIEDPNNKPISIEITSSQFAWAIRYPGA 233 Query: 146 G----------IATVN------------------EIAFPANTPVYFKVTSNSVMNSFFIP 177 I ++N E+ P N PV +TS V++SF++P Sbjct: 234 DGIVGLKNYKLINSINALGIDFKDKNNLDDQSADEMVIPVNKPVRLILTSKDVIHSFYMP 293 Query: 178 RLGSQIYAMAGMQTRLHLIA------------NEPGTYDGISASYSGPGFSGMKFKAIAT 225 Q+ + GM + + Y + G G M+ + Sbjct: 294 HFRVQLNTVPGMTSYFEFTPTITTEEMKAKTNDPTFKYLFLCNKICGDGHYKMQKEVKVV 353 Query: 226 PDRAAFDQWVAKAKQSPNTMSD 247 A ++ WV K P ++D Sbjct: 354 -SMAEYEAWVKKQ---PAYLTD 371 >UniRef50_Q83GL9 Cytochrome c oxidase subunit 2 n=2 Tax=Tropheryma whipplei RepID=Q83GL9_TROWT Length = 290 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 103/265 (38%), Gaps = 36/265 (13%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLD---P---KGQIGLEQ-----RSLILTAFGLM 51 + + +SL + + +++ GC + + P +G+ + + L A+ ++ Sbjct: 10 VIRPIRSLLVVFVLTLSLVFVGCTTQQMHGFLPGFVEGESSVTETTQVYSDLWFNAWFVL 69 Query: 52 LIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT 111 +++ I M V +R D P ++ VE ++ +P++++ V + + + Sbjct: 70 IVIGILVWAMVVVAVVVFRRKRSDTTLPPQVQYNLPVETLLTGLPLILVAVFFVFSIRVS 129 Query: 112 HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIAT--------------VNE----- 152 A+ KP + I V+ W W F+Y + V+E Sbjct: 130 DAVNLPKPAD-----VHIGVIGKQWAWDFVYFDSNTYFPGLQAQYIESSPGKVDESKLPV 184 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P N V + S V++SF+I + + G+ R++ G Y G A + G Sbjct: 185 LYLPVNKKVEIDLRSRDVVHSFWIIDFLYKRDIVPGLTNRIYFTPTRIGEYRGKCAEFCG 244 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAK 237 S M F + + + + +A Sbjct: 245 EFHSAMLF-VVKVVTQEEYKKHMAD 268 >UniRef50_Q2J8B8 Cytochrome c oxidase subunit 2 n=4 Tax=Frankia RepID=Q2J8B8_FRASC Length = 316 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 93/250 (37%), Gaps = 22/250 (8%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAILM 61 LR+ + L++ + + C+ P+G R L + + + + ++ Sbjct: 46 LRRVLRLGAVLAVVGI--MATACDRPTFGYPRGVTNQTPRLLNIWQGSAIAALAVGVLVW 103 Query: 62 AVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA 121 + F + ++ VE + VP++I+ L T + + P Sbjct: 104 GMIFYAIIAFRKRSDVLPRQVRYNLPVEVLYTVVPVVIVAGLFFYTARDESEVTKLSP-- 161 Query: 122 HDEKPITIEVVSMDWKWFFIYPEQG--------IATVNE------IAFPANTPVYFKVTS 167 + +T++V++ W W F Y + G I + P N + F +S Sbjct: 162 --KPDVTVDVIAFRWNWQFKYLDTGSGRQGANPIEVTGRPGEPAVLVLPQNRSIRFVESS 219 Query: 168 NSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPD 227 V++SF++P + + G + L + GT+ G A G M F P Sbjct: 220 PDVIHSFWVPEFLFKRDVIPGRVNQFELTITKTGTFIGRCAELCGTDHDRMNFYVKVVP- 278 Query: 228 RAAFDQWVAK 237 +A +D ++A Sbjct: 279 QAEYDTFIAD 288 >UniRef50_P08306 Cytochrome c oxidase subunit 2 n=28 Tax=Rhodobacterales RepID=COX2_PARDE Length = 298 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 87/237 (36%), Gaps = 32/237 (13%) Query: 30 LDPKG-QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 P + +Q+ L ++ V I L+ + ++ ++H+ + Sbjct: 49 FQPASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFNRRAN--PVPARFTHNTPI 106 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 E + VP+LI++ + + + ++ + I+ + W W + YP G+A Sbjct: 107 EVIWTLVPVLILVAIGAFSLPILFRSQEMP----NDPDLVIKAIGHQWYWSYEYPNDGVA 162 Query: 149 ------------------------TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 T N + P V +VT+ V++++ IP + Sbjct: 163 FDALMLEKEALADAGYSEDEYLLATDNPVVVPVGKKVLVQVTATDVIHAWTIPAFAVKQD 222 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 A+ G +L ++ G Y G + G + M A + ++ W+A AK+ Sbjct: 223 AVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAV-SQEKYEAWLAGAKEE 278 >UniRef50_A3Z005 Cytochrome c oxidase subunit 2 n=1 Tax=Synechococcus sp. WH 5701 RepID=A3Z005_9SYNE Length = 309 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 95/253 (37%), Gaps = 15/253 (5%) Query: 32 PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAV 91 P L + V + + + V RA D + + +E + Sbjct: 41 PASSAAPLVDGLFGFETAVATFVFVGVVSVMVWVVLFNRAEKYDMSDAEPIEGNTTLEII 100 Query: 92 VWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT-------------IEVVSMDWKW 138 +P+++++ +A T + + P+ H P T ++V++ W W Sbjct: 101 WTVIPLVLVMGIAAYTIQVNREIGLIGPMDHAHAPATANSTAAAPPPGGEVQVIARQWSW 160 Query: 139 FFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIAN 198 F YP G+++ E+ P + ++ S V++ F++P + + G L L Sbjct: 161 EFRYPVAGVSST-ELHLPLGRRLGLQLESEDVIHGFYVPAFRLKQQVIPGRSITLFLTPT 219 Query: 199 EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPS 258 G Y + YSG F+ + + + A + +W+ +A + P A + A Sbjct: 220 RAGRYRLRDSEYSGTWFAANQADVVVESEEA-YQEWLRRASRLPLQPGLSDAAREYAQQL 278 Query: 259 EYNQVEYFSNVKP 271 ++ ++ + P Sbjct: 279 SGDRPSGYATITP 291 >UniRef50_Q03736 Cytochrome c oxidase subunit 2 n=11 Tax=Rhodobacteraceae RepID=COX2_RHOSH Length = 303 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 85/259 (32%), Gaps = 46/259 (17%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 + + + L ++ + I L+ + W++ ++H+ Sbjct: 40 GTGFQPSASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNK--VPARFTHN 97 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 + +E VPI+I++ + + + E +T++V W W + YP++ Sbjct: 98 SPLEIAWTIVPIVILVAIGAFSLPVLFNQQ-----EIPEADVTVKVTGYQWYWGYEYPDE 152 Query: 146 GIAT------------VNEIAFPANTPV--------------------------YFKVTS 167 I+ N ++ + +VT Sbjct: 153 EISFESYMIGSPATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQVTG 212 Query: 168 NSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPD 227 V++S+ +P G + A+ G +L A G + G + G + M + Sbjct: 213 ADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVVSE 272 Query: 228 RAAFDQWVAKAKQSPNTMS 246 A + W+ +A+ +S Sbjct: 273 EA-YAAWLEQARGGTYELS 290 >UniRef50_UPI0001C31709 cytochrome c oxidase, subunit II n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31709 Length = 334 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 86/257 (33%), Gaps = 36/257 (14%) Query: 16 FAGTVLLSGCNSALLDPKG---QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 V SG + L P+ E SL + ++V + W++RA Sbjct: 59 IGSLVFASGAFADFLTPESGGSPNADEIDSLYKIVLYIAIVVFVVVEGALFWSIWRFRAK 118 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPILI------------IIFL---------AVLTWKTT 111 H N + WTV + + + + Sbjct: 119 KGA---VAAQIHGNTRLEISWTVGAALILVALAAVTFSKLGSIQDPPNSGENGLQLADGV 175 Query: 112 HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ------GIA-TVNEIAFPANTPVYFK 164 +P + K +TI V + W + Y G+ + E+ PA+T V Sbjct: 176 LTASTDEPSPPNGKKLTICVTGRQYIWRYTYGANCQRNAFGLPYSYEEMVAPADTTVVLD 235 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT-YDGISASYSGPGFSGMKFKAI 223 + + V++S++IP+LG + A+ G + A G Y G A G + M + Sbjct: 236 IEATDVIHSWWIPKLGGKFDAVPGYRNYTWFKAPRAGELYKGQCAELCGRNHADMTARVR 295 Query: 224 ATPDRAAFDQWVAKAKQ 240 A + W+ + ++ Sbjct: 296 IV-TPAEYTAWLDRQRR 311 >UniRef50_A5VD54 Cytochrome c oxidase subunit 2 n=3 Tax=Alphaproteobacteria RepID=A5VD54_SPHWW Length = 338 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 32/213 (15%) Query: 46 TAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLA 104 ++ ++ I +++ ++RA A P+ + N + +VWT VP+LI++ +A Sbjct: 85 LLMPIITVISIFVLILIGYVVIRFRAK---ANPVPSKTSHNTLIEIVWTLVPVLILLVIA 141 Query: 105 VLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFP------AN 158 V + + + A + +TI+V+ W W + YP+ G + P Sbjct: 142 VPSIRLL-----AHQYAQPKPDLTIKVIGNQWYWTYQYPDNGDFELVSNMLPDAEAKKRG 196 Query: 159 TPVYF----------------KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 P VTSN V++S+ +P +++ A+ G A G Sbjct: 197 EPRMLAVDERVVVPVDAVVKVIVTSNDVIHSWAVPAFWTKMDAVPGRLNETWFKAEREGL 256 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 Y G + G M + F +WV Sbjct: 257 YYGQCSELCGARHGFMPIAVEVV-SKDKFAEWV 288 >UniRef50_Q11SZ4 Cytochrome c oxidase subunit 2 n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11SZ4_CYTH3 Length = 347 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 89/260 (34%), Gaps = 47/260 (18%) Query: 21 LLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 +S + L + G+ L ++ + + + F + YR + Y Sbjct: 36 FMSARDKFLPEAASAHGVRTDMLFWVIMAVLTLAFLVTNALLYFFPYMYRFKEGNRGY-- 93 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 + ++ VE + +P +I+ V +K HA+ P + IE++ + W Sbjct: 94 FYPDNHTVERIWTIIPAIIMAGFVVYGYKEWHAITSPAPAGSE----VIEIMGKQFAWQV 149 Query: 141 IYPE----------QGIATVNE------------------IAFPANTPVYFKVTSNSVMN 172 YP + I VNE + P V + S V++ Sbjct: 150 RYPGADGQLGKYHFRKIDAVNEFGIDFNDTASYDDFIPMELHLPKGKNVSLHIRSRDVIH 209 Query: 173 SFFIPRLGSQIYAMAGMQTRLHLIAN--------EPG----TYDGISASYSGPGFSGMKF 220 S F+P ++ A+ GM T+ + G Y+ G G M+F Sbjct: 210 SVFLPHFRVKMDAVPGMPTKFWFTPTISTKEMREKTGNAEFNYELACTEVCGRGHYAMRF 269 Query: 221 KAIATPDRAAFDQWVAKAKQ 240 I + A +++W A K Sbjct: 270 LVI-VDEPADYEKWKASQKS 288 >UniRef50_C5CLF6 Cytochrome c oxidase, subunit II n=5 Tax=Burkholderiales RepID=C5CLF6_VARPS Length = 322 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 13/164 (7%) Query: 122 HDEKPITIEVVSMDWKWFFIYPEQGIA----TVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 + + +EV + W W Y E +A T NEI P PV + ++ V++SF++P Sbjct: 102 STDGALQLEVTAHQWWWEVRYVEPQVADSFMTANEIHVPTGRPVIVTLKADDVIHSFWVP 161 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 L + + G L+ A+ G Y G A + G + M F +A P + W A Sbjct: 162 SLAGKKDLIPGRTATLNFRADRDGIYRGQCAEFCGSQHALMAFFVLAEP-PERYAAWAAA 220 Query: 238 AKQSPNTMSDMAAFEK--------LAAPSEYNQVEYFSNVKPDL 273 +++ ++ A + + P+L Sbjct: 221 QRRTAGEPAEGQPLRGREIFMRSSCAMCHAIDGTSAQAVRGPNL 264 >UniRef50_A9IUK7 Cytochrome-c oxidase chain II/c n=2 Tax=Betaproteobacteria RepID=A9IUK7_BORPD Length = 328 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 17/190 (8%) Query: 96 PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG----IATVN 151 P++++ L V A++ A + IEV+ W W Y ++ T N Sbjct: 85 PVIVLSALLVYGLVVAAAMQ----RAAEPAAARIEVMGEMWWWRVRYLDEHGRTLFETAN 140 Query: 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYS 211 EI PA PV + S +V++SF++P L ++ + G RL + A +PG G A Y Sbjct: 141 EIRIPAGQPVDLLLGSRNVVHSFWVPNLAGKLDMVPGHINRLRIQARQPGVLRGQCAEYC 200 Query: 212 GPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT--------MSDMAAFEKLAAPSEYNQV 263 G + M F F W+ +Q T A + A Sbjct: 201 GAQHANMMFDVQVLAPP-QFQDWLRAQQQPAATPGGNAWLLAGRQAFLQACAQCHTVRGT 259 Query: 264 EYFSNVKPDL 273 + PDL Sbjct: 260 PAAGTLGPDL 269 >UniRef50_Q1RI44 Probable cytochrome c oxidase subunit 2 n=19 Tax=cellular organisms RepID=COX2_RICBR Length = 269 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 102/273 (37%), Gaps = 41/273 (15%) Query: 13 LSLFAGTVLLSGC--------NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 ++L + S C P I E + +V+ + V Sbjct: 8 ITLIGLVLFSSFCFASEPLPWQMGFQPPASPIMEELHKFHDFLLYISTAIVLFVAGLLVF 67 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 K+ A N +SH+ +E + +PI+I++ +AV +++ E E Sbjct: 68 VCIKFNARNN--PVPAKFSHNILIEIIWTVIPIIILVIIAVPSFRILRHAEKI-----PE 120 Query: 125 KPITIEVVSMDWKWFFIYPEQG---------------------IATVNEIAFPANTPVYF 163 +TI+VV W W +IYP+ + N I P N V F Sbjct: 121 ADLTIKVVGYQWYWHYIYPDHNDIEFDSVMISDENLKPDQKRLLDVDNRIVIPENATVRF 180 Query: 164 KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAI 223 +T++ V++SF +P LG +I A+ G + G Y G + G M AI Sbjct: 181 LITASDVIHSFAVPSLGFKIDAVPGRVNETWTRVAKKGVYYGQCSELCGINHGFMPI-AI 239 Query: 224 ATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 + FD WVA S N ++ KLAA Sbjct: 240 EVVSKEDFDNWVA----SKNKVAANGENSKLAA 268 >UniRef50_C6XR85 Cytochrome c oxidase subunit 2 n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR85_HIRBI Length = 326 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 106/299 (35%), Gaps = 44/299 (14%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 G L++ AG + + L P+ ++ +M+I+ + I + W Sbjct: 31 AGALTVGAGAAFANEPVAMALGPQPAASAVAENVTWFHNYVMVIITVITIFVTFLLGWVI 90 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTH--ALEPSK-------- 118 N A P N V+WTV P+LI+ +A+ ++ +EP+K Sbjct: 91 LKFNAKANPVPAKFSHNTAIEVIWTVAPVLILFAIAIFSFPLLFEQDVEPTKQKLENGEY 150 Query: 119 PLAHDEKPITIEVVSMDWKWFF---------------------------IYPE--QGIAT 149 E +TI+ W W + P + ++T Sbjct: 151 AEIAPEDWVTIKTYGRQWYWSYFIDTENADGEVEVVEFDARMIAEDDIPSTPGARRNLST 210 Query: 150 VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 N + P + + ++ V++S+ +P + A+ G +L A + G Y G + Sbjct: 211 DNPLVLPQGKYIRMNLAASDVIHSWAMPAFRLKTDAVPGRLNQLWFKAEKLGVYYGQCSE 270 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSN 268 G + M + P + +DQW++ A N + + + AP V S Sbjct: 271 LCGRDHAFMPIEMRIVP-QDQYDQWLSLA---ANDIDEATTYINQVAPRPAAPVRVASA 325 >UniRef50_C7M190 Cytochrome c oxidase subunit II n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M190_ACIFD Length = 257 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 19/245 (7%) Query: 11 GWLSLFAGTVLLSGCNSALLDP---KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 G + A +L+ C G L F + V + + Sbjct: 21 GPAVVAAAGTVLAACKLPTFGAYTGNTVQGNATFHLWQGFFVASIFVGGITFALLIYAII 80 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKP 126 ++R P H N + +T VPILI+ L T + + ++ + Sbjct: 81 RFRRRGDA---IPKQVHGNTPLEIFYTAVPILIVAVLFFFTVRVENKVDAV----AKKPA 133 Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNE-------IAFPANTPVYFKVTSNSVMNSFFIPRL 179 + ++V + W W F+YP + + + + P F++ SN V++ F +P Sbjct: 134 LRVDVTAFQWGWKFVYPSYHVTEITQGPTGYPTLVLPVGETSTFRLVSNDVVHGFDLPNF 193 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 YA+ G+ ++ G + G + M F + F W+ + + Sbjct: 194 DFSRYALPGVVNYFDFTPQHDASFVGRCSHLCGLYHADMLFYVKVV-SASQFMTWIHQQQ 252 Query: 240 QSPNT 244 + Sbjct: 253 GRASA 257 >UniRef50_B1Y7T1 Cytochrome c oxidase subunit 2 n=3 Tax=Proteobacteria RepID=B1Y7T1_LEPCP Length = 269 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 99/264 (37%), Gaps = 43/264 (16%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLM--LIVVIPAILMAVGFA 66 S+ + + G+VL + P + + VVI A+++ Sbjct: 4 SIALIVIVVGSVLFHLLSPWWTQPLASNWQRMDDTLTITLLITGAFFVVIHAVVIYAILR 63 Query: 67 WKYRASNKDAK--YSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 W++RA A+ Y+P+ +++E W + I + +A+L + +P A Sbjct: 64 WRHRAGRGQARAAYTPD---DHRLER--WLIGITTVGIVALLAPGLVVYADYVRPPA--- 115 Query: 125 KPITIEVVSMDWKWFFIYPEQG------------------------------IATVNEIA 154 + +EVV W+W + + + + NE+ Sbjct: 116 DALKVEVVGQQWRWRYRFAGEDGLLGRSDIRHVSADNPFGLDPADARGHGDVLIDDNELH 175 Query: 155 FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPG 214 P PV ++ SN V++ FF+P +++ + G T + G ++ + A G G Sbjct: 176 LPLARPVQLQLRSNDVLHDFFVPPFRARMNIVPGSVTTFWFTPTQTGRFELMCAQLCGIG 235 Query: 215 FSGMKFKAIATPDRAAFDQWVAKA 238 M+ + D AAF W+A Sbjct: 236 HHLMRG-VVVVEDEAAFQAWLAAQ 258 >UniRef50_P74044 Cytochrome c oxidase subunit 2 n=1 Tax=Synechocystis sp. PCC 6803 RepID=P74044_SYNY3 Length = 300 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 99/302 (32%), Gaps = 35/302 (11%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCN--SALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 M + ++ G L G L Q L L +V + Sbjct: 1 MSRKNLILLAVYIVFTVGASLWLGQRAYQWLPPAAAQEAQPVGDLFSFLVSLGSVVFLGV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALEPS 117 +R S ++ + +P N + WTV PI+++ ++A ++ + Sbjct: 61 AGAMAYSVIFHRFSLQNPQGAP--IRGNARLEIFWTVVPIILVTWIAWYSYVIYQRMNVL 118 Query: 118 KPLA--------------------------HDEKPITIEVVSMDWKWFFIYPEQGIATVN 151 PL + P I V W W F YP G+ T + Sbjct: 119 GPLPVVEVPQLLGEKAIAADAPAELAMAQGSNINPERIGVEVKQWLWTFTYPNGGV-TSH 177 Query: 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYS 211 E+ P + V +TS V++ F++P + + + N G Y + +S Sbjct: 178 ELHLPLDRRVTLNMTSKDVLHGFYVPNFRIKQDIVPNREIEFSFTPNRLGEYKLHDSQFS 237 Query: 212 GPGFSGMKFKAIATPDRAAFDQWVAKAKQ-SPNTMSDMAAFEKLAAPSEYNQVEYFSNVK 270 G F+ M + + + W+ K +P + + A E P+ + + V Sbjct: 238 GTYFAVMTAPVVVQ-SLSDYQAWLESQKSLTPGELPNPALDEFKQTPTTPLK-SGWPTVP 295 Query: 271 PD 272 P Sbjct: 296 PG 297 >UniRef50_B3RBU3 Cytochrome c oxidase subunit 2 n=28 Tax=Proteobacteria RepID=B3RBU3_CUPTR Length = 454 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 92/271 (33%), Gaps = 39/271 (14%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWK 68 ++ + + A +VL + P + + + I I L W+ Sbjct: 6 AIALVVMVAASVLFHFLSPWWATPLASNWKQMDDTLTITLVITGIFFIGINLFVGYIVWR 65 Query: 69 YRAS----NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 +R + ++ N + W + + + +L + +P Sbjct: 66 FRHDAPHPRGGTGHRASYHPENSRLEL-WLIGGTTLGVILLLAPGLFVYADYVRPPR--- 121 Query: 125 KPITIEVVSMDWKWFFIYP------------------------------EQGIATVNEIA 154 + + +EVV W W F +P + + E+ Sbjct: 122 EAMVMEVVGQQWSWAFRFPGKSGQLGASDARFVTGANPLGLDPDDPRGLDNIVIVGPEVH 181 Query: 155 FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPG 214 P N PV + S V++ F++P +++ + GM T + G +D + A G G Sbjct: 182 LPLNQPVKVLLRSKDVLHDFYVPPFRARMNMVPGMVTSFWFTPTQTGRFDILCAQLCGVG 241 Query: 215 FSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 M+ + + AAF+ W+AK + T+ Sbjct: 242 HYNMRGTVVVE-EPAAFEAWLAKQQTFAMTL 271 >UniRef50_C1XPU9 Cytochrome c oxidase subunit 2 n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XPU9_9DEIN Length = 271 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 95/265 (35%), Gaps = 38/265 (14%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 ++ +L +++ T+ L+ P +LI+ F + + ++ L Sbjct: 1 MQALAVALTLVAMIVATIFLTVAKVWWFAPLASNWGSLDTLIVITFAVTGLALVGVNLFI 60 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH 122 + +RA + N + + + +L + + +P Sbjct: 61 AYSVYYHRAQKGRKAV---FFVDNPRLE-WGLIAATTVGIVVLLGPGLYYYAQLIRP--- 113 Query: 123 DEKPITIEVVSMDWKWFFIYPEQ----GIATVNE-------------------------- 152 + + +EV++ W W + YP + G A++ Sbjct: 114 PQNHMVVEVLTQQWLWSYRYPGKDGILGPASIKRFTPANQFGLDPQAPASQDDIPVLGGP 173 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 +A P PV ++ SN V++SF++P + + GM T L + G + I A G Sbjct: 174 LALPVGQPVLLRMRSNDVLHSFYVPEFRVKWDVVPGMVTELWFTPTKTGEFQVICAELCG 233 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAK 237 G M K + + AF +W+++ Sbjct: 234 VGHYSMVGKVVVM-EPDAFQKWLSE 257 >UniRef50_A5GVD1 Cytochrome c oxidase subunit 2 n=11 Tax=Cyanobacteria RepID=A5GVD1_SYNR3 Length = 312 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 95/267 (35%), Gaps = 19/267 (7%) Query: 20 VLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 ++ +L G+ V + + RA D Y Sbjct: 32 LMAQWSYGWFPPQASTAAPYVDNLFALETGIGTFVFLGCTGVMAWSLLFDRADKYDESYG 91 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE---PSKPLAHDEKPIT-------- 128 + ++E +P +++ +A + + L+ P A P+ Sbjct: 92 APIEGNTRLEITWTLIPTVVVFAIAFYSMQVNDKLDALGPKHKYAIGTDPLVGAVEDPRA 151 Query: 129 ----IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 I+V+S W W F+YP G+ + +E+ P N V F++ S V +SF++P + Sbjct: 152 TVGPIDVISRQWSWEFVYPN-GVRS-SELHLPINQRVNFRLISEDVNHSFYVPAFRLKQD 209 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 + G + + G + A +SG +S + + +A +D W+ + P Sbjct: 210 IVPGSVISFSVTPTKEGRFRLRDAHFSGAYYSQNQTDVLVQ-SQAIYDDWLKTTAKQPLQ 268 Query: 245 MSDMAAFEKLAAPSEYNQVEYFSNVKP 271 ++ +L A ++ V P Sbjct: 269 -PGLSPGNELYAKRLATGDRGWATVPP 294 >UniRef50_B2J6R2 Cytochrome c oxidase subunit 2 n=6 Tax=Nostocaceae RepID=B2J6R2_NOSP7 Length = 361 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 9/170 (5%) Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 + A + + V + + W F YPE GI T E+ P V +T+N V+++F++ Sbjct: 198 TPDKAGKPAELQVNVTGLQYAWIFTYPETGITT-GEMHVPIGREVQISMTANDVIHAFWV 256 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 P + A+ G Q+ + + G Y I A GP M+ + P + AFD+W+ Sbjct: 257 PEFRLKQDAIPGRQSEIRFTPQKAGDYTLICAELCGPYHGAMRAPVVVEP-QEAFDKWMQ 315 Query: 237 KAK-QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLF--ADVINKFMA 283 + S T++ A P++ + E+ + D+ +++++ Sbjct: 316 EQLVASKETLNQAIAVN----PADLSPNEFLAPYTKDMGIKPEILHQVHH 361 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 5/121 (4%) Query: 12 WLSLFAGTVLLS----GCNSALLDPKG-QIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 W L + L+ G N LL + L + + + + + A Sbjct: 8 WTLLIGIVLTLASFWYGQNHGLLPAAATDEAVLVDGLFNAMMIVSTGIFLLVEGILIYSA 67 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP 126 ++YR D K P + +E + +P +I+I ++V ++ + + P A E P Sbjct: 68 FRYRQRAGDNKDGPPVEGNIPLEILWTAIPAIIVIGISVYSFDVYNEIGGFDPHAIHEAP 127 Query: 127 I 127 + Sbjct: 128 M 128 >UniRef50_Q5V019 Cytochrome c oxidase subunit 2 n=2 Tax=Halobacteriaceae RepID=Q5V019_HALMA Length = 271 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 81/221 (36%), Gaps = 15/221 (6%) Query: 61 MAVGFAWKYRASNKDAKYSPN----------WSHSNKVEAVVWTVPILIIIFLAVLTWKT 110 + A KYR + + V ++ I II ++++ W Sbjct: 48 YTMYHALKYRDDGSGTDPYADKVERPEMGELPTGGTGGRKVFYSFSISAIIVVSLIAWTY 107 Query: 111 THALEPSK-PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNS 169 + L + P E+ + I+V + W FIYP T N + P + V +VTS Sbjct: 108 SQLLYIEQGPDPAQEEALEIDVEGYRFGWDFIYPNGH--TANTLRVPQDRVVRLQVTSTD 165 Query: 170 VMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRA 229 V ++F IP L + A+ G T ANE GTY G G S M + P + Sbjct: 166 VFHNFGIPELRVKTDAVPGQYTSAWFTANETGTYAAKCYELCGSGHSLMTTDVVVMP-QD 224 Query: 230 AFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVK 270 ++ W + S + D A A S +V Sbjct: 225 EYEAWYNGTEGSAGS-GDQPAANGTATESTSLGTPTAGDVA 264 >UniRef50_B4B7G4 Cytochrome c oxidase subunit 2 n=3 Tax=Cyanobacteria RepID=B4B7G4_9CHRO Length = 322 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 101/290 (34%), Gaps = 32/290 (11%) Query: 12 WLSLFAGTVLLSGCNSAL-------LDPKGQI-GLEQRSLILTAFGLMLIVVIPAILMAV 63 WL L V+L + + L P+ L +L L + + + Sbjct: 25 WLMLGVIAVILMAISIWIGQLSYAWLPPQASAESLLVDNLFSFLVTLGTFIFLGVTGTVM 84 Query: 64 GFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL--------- 114 + +A D P + +E + +PIL++ ++A +++ + Sbjct: 85 YSVFFQQAGKYDYSDGPPVEGNVTLEIIWTAIPILLVFWIAGYSYQIYIDMGIQTNMGLG 144 Query: 115 -----------EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYF 163 + E IEV + W W F YP +++ E+ P + Sbjct: 145 HLHLPIKMESAMAATTANTPEAVEKIEVEAKQWAWVFKYPNSKVSST-ELHLPEGKRIRL 203 Query: 164 KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAI 223 +TS+ V++ F+IP + + + G Y + +SG F+ M+ I Sbjct: 204 ALTSDDVLHGFYIPAFRIKQDIIPAHPLDVEFTPIRTGKYRLRDSQFSGTYFATMQANVI 263 Query: 224 ATPDRAAFDQWVAKAKQ-SPNTMSDMAAFEKLAAPSEYNQ-VEYFSNVKP 271 + +W+ A +P ++ AA E ++ + +V P Sbjct: 264 VE-SLEDYQKWLHSAATLTPTPATNQAATEYEQETNKNKPFQAGWPSVAP 312 >UniRef50_Q1YMW9 Putative cytochrome oxidase subunit II n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMW9_MOBAS Length = 364 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 80/266 (30%), Gaps = 27/266 (10%) Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT-HALEPSKPLAHDEKPIT 128 R + S + W L++ L ++ + L E Sbjct: 90 RRDPDLQAGGRIIAVSRPPGGIGWIHAGLVLTTLVLIGFTAWTVDLMARIAAPGREPSFM 149 Query: 129 IEVVSMDWKWFFIY-----PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQI 183 IEV + + W Y P + T NE+ P PV ++ S V++SF++P L + Sbjct: 150 IEVTAQQFWWEARYVDPDDPARSFETANELHIPLGEPVRIRLRSTDVIHSFWVPALSGKT 209 Query: 184 YAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF-------DQWVA 236 A+ G + + G Y G Y G + M + F Sbjct: 210 DAIPGQINETWIQGDRVGVYRGQCTEYCGQQHTNMAMRMF-VDAPDDFTAWWDAQAADAE 268 Query: 237 KAKQSPNTMSDMAAFE-KLAAPSEYNQVEYFSNVKPDLFADVINKFMA-------HGK-- 286 A ++ AF + A V PDL + +A G Sbjct: 269 PASPGSLAVAGRQAFRLRCGACHTVRGTRSAGEVGPDLTHLMSRTTIASAMLPNTKGHLS 328 Query: 287 ---SMDMTQPEGEHSAHEGMEGMDMS 309 + G H G+ G ++ Sbjct: 329 GWIAAPQALKPGSHMPDTGISGPELH 354 >UniRef50_C7I249 Cytochrome c oxidase subunit 2 n=1 Tax=Thiomonas intermedia K12 RepID=C7I249_THIIN Length = 288 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 99/254 (38%), Gaps = 36/254 (14%) Query: 31 DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEA 90 +P I +++ L+ + L + I +K+R S + ++ S KVE Sbjct: 42 NPVSPIAKQEKFLMDMMLWVCLGIGIVVFGAMFYSVYKHRKSKGA--VAAHFHESTKVEI 99 Query: 91 VVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY---PEQGI 147 +PILI+I + + +T A E H + +T++ WKW + Y P +GI Sbjct: 100 AWTIIPILIVIAILIPATRTVIAQEN-----HSDSFMTVKATGAQWKWGYDYMAGPGKGI 154 Query: 148 -------------------------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 A +E+ P + + TS+ V++ F++ LG Q Sbjct: 155 SFWSTLTTPYSEIYEGKDLPSNFVLAVDHELVVPVDKKIKIVTTSDDVLHGFYVNSLGVQ 214 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 + A+ G A + GTY G A G + M I ++QWVA+ K++ Sbjct: 215 MDAIPGFVRSTWFTAEKTGTYYGQCAQICGKYHAFMPI-VIKVVTMPEYEQWVAQWKKAH 273 Query: 243 NTMSDMAAFEKLAA 256 + A + Sbjct: 274 PDSTPPADGAAPSK 287 >UniRef50_D2RUF7 Cytochrome c oxidase, subunit II n=2 Tax=Halobacteriaceae RepID=D2RUF7_9EURY Length = 329 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 11/181 (6%) Query: 66 AWKYRASNKDAKYS--------PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 A+KYR + P K + + + +I+I L + T+ +E Sbjct: 37 AYKYRDDGEPKDDESLPTLGELPTGGKGGKKLFLSFGISAVIVISLVIWTYGMLLYVEDP 96 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 + DE+P+ IEV + W+F Y G+ +++ + PA+ PV + TS V ++F IP Sbjct: 97 QD-EFDEEPVEIEVTGQGFAWYFEYAN-GVESISTMRIPADHPVAIEATSGDVWHTFGIP 154 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 L + A+ G +A+EPG ++ G + M + AF++W+ Sbjct: 155 DLRVKADAIPGEYDETWFMADEPGEHEIKCFELCGESHTAMTGNVQVM-EEEAFNEWLNG 213 Query: 238 A 238 Sbjct: 214 Q 214 >UniRef50_C7PG38 Cytochrome c oxidase subunit 2 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PG38_CHIPD Length = 353 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 85/260 (32%), Gaps = 53/260 (20%) Query: 25 CNSAL-----LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 CN AL + + G ++I + IV I ++ F++KY+ + Sbjct: 62 CNDALKGKIFFEAASEQGEGIDNMIKWTLWITGIVFIITQILLFWFSFKYQEKEGQQAF- 120 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 + H+NK+E + +P + + L + + + P + +E+ + W Sbjct: 121 -YFPHNNKLELIWTVIPAIALTILVAIGLRHWFRITSDAP----KDAAVVEITGKQFNWL 175 Query: 140 FIYPE----------QGIATVN-------------------EIAFPANTPVYFKVTSNSV 170 YP + I N E+ PV + S V Sbjct: 176 IRYPGKDGQLGRKFFKNINDANNPVGQDWDDQLNKDDFMATEMHLVVGKPVKLIIGSRDV 235 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIA--------NEPG----TYDGISASYSGPGFSGM 218 ++ + ++ A+ G+ T L ++ G Y+ G G M Sbjct: 236 IHDVGLSHFRLKMDAVPGIPTTLWFTPKYTTTEMKDKTGNPDFVYEISCDQMCGSGHYSM 295 Query: 219 KFKAIATPDRAAFDQWVAKA 238 K I + FD W AK Sbjct: 296 K-ANIVVETQEEFDAWTAKQ 314 >UniRef50_Q3M753 Cytochrome c oxidase subunit 2 n=6 Tax=Nostocaceae RepID=Q3M753_ANAVT Length = 311 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 106/296 (35%), Gaps = 31/296 (10%) Query: 3 LRKYNKSLGWLSLFAGTVLLS---GCNSALLDPKGQIGLEQ--RSLILTAFGLMLIVVIP 57 + ++ + L + A +++S G + P Q L + +++ Sbjct: 1 MLRFLEYLLIVGCIAVLLVVSHGMGQVAYSWMPLEATAEAQKVDDLFSFLVSMGAFIILG 60 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV-PILIIIFLAVLTWKTTHALE- 115 + M V +RA D + S + ++WT P L+++++A + L+ Sbjct: 61 LVGMMVYSVLFFRAPKNDYSEG-HPSRGDIRLEILWTATPTLLVLWVAWQGFNIYQQLDV 119 Query: 116 --------PSKPLAHDEKPI-----------TIEVVSMDWKWFFIYPEQGIATVNEIAFP 156 P+ TIEV W W F YP T E+ P Sbjct: 120 LGLQQVVHLHTPVEEPVYAASISDIPKPADETIEVFVQQWDWSFRYPNN--VTSQELHLP 177 Query: 157 ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 N + + V++SF++P Q Y + G L + G Y + +SG F+ Sbjct: 178 VNLRTRLNMHAKDVLHSFYVPEFRLQQYIVPGRNIDLVVTPIRMGKYKLKDSLFSGTYFA 237 Query: 217 GMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPD 272 M ++QW+ +AK ++ + A E P + ++ V PD Sbjct: 238 LMDANVHVE-SLEQYNQWLTQAKHESMSIKNQAVAEYSQPPKTLFKSGWY-TVAPD 291 >UniRef50_C8XCY3 Cytochrome c oxidase subunit 2 n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XCY3_NAKMY Length = 316 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 97/284 (34%), Gaps = 32/284 (11%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKG------QIGLEQRSLILTAFGLMLIVV 55 R R+ G L + +VL+SGC+ A L G R A L + Sbjct: 5 RARRRIFLAGMLGVL--SVLVSGCSFADLPTWGWPMGVTPQATRMREFWQGATIAALAIG 62 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + Y Y + +E V VP L++ L T T + Sbjct: 63 VVVWGLMFWAFIVYHKRKNGPLYPKQTKENLPLELVYTAVPFLMVFVLFYFTVTTENVAL 122 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQG----------IATVNE---IAFPANTPVY 162 +P +T++VV+ W W F YP + T NE + P N + Sbjct: 123 EKQP----NPDVTVDVVAFKWNWDFGYPGTSLPGGGGEVHTVGTSNEIPILVLPVNKVIQ 178 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMA-----GMQTRLHLIANEPGTYDGISASYSGPGFSG 217 + + S V++SF+ + + + G + G A G Sbjct: 179 YDLRSKDVIHSFWTIDFLFKRDVFPYPEQNQTDNKFQNTIEQTGAFVGRCAELCGTYHGS 238 Query: 218 MKFKAIATPDRAAFDQWVA-KAKQSPNTMSDMAAFEKLAAPSEY 260 M F+ A P + +D ++ + +P T + A E L A E Sbjct: 239 MNFEVRAVP-QDVYDTYLDYRQTVNPQTRAPYTAAEALTATGEK 281 >UniRef50_B8HMH5 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HMH5_CYAP4 Length = 351 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Query: 113 ALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMN 172 + P+ A + + V + + W F YP+ I + E+ P N V +++N V++ Sbjct: 214 RIGPTTLEAATPADLEVNVTGLQYAWIFTYPDSNIVS-GELHLPVNRSVKLNISANDVIH 272 Query: 173 SFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFD 232 +F++P+ + A+ G QTR+ G Y I A G S MK + I + + Sbjct: 273 AFWVPQFRLKQDAIPGQQTRMRFTPTAVGEYPVICAELCGAYHSAMKTRVIVQSPQ-EYA 331 Query: 233 QWVAKA 238 W+ Sbjct: 332 AWIQSQ 337 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Query: 37 GLEQRSLI--LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT 94 + L + A + L +VI L+ A++ + + H N ++WT Sbjct: 38 APQIDQLFNAMLAISIGLCLVIGGALIYSLLAFRQKPGDNTDAVP---VHGNVPLEILWT 94 Query: 95 -VPILIIIFLAVLTWKTTHALEPSKPLA--HDEKPITIEVVSMD 135 +P I+++LA+ ++ A++ +A H+ +VV+ Sbjct: 95 AIPSAIVLWLAIYSFDIYKAVDSGAYIASLHESHHAPEQVVASQ 138 >UniRef50_C6W9F6 Cytochrome c oxidase subunit 2 n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6W9F6_ACTMD Length = 311 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 94/260 (36%), Gaps = 34/260 (13%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKG------QIGLEQRSLILTAFGLMLIVV 55 R + K G + L +GC++ + G R L + L+V Sbjct: 8 RAARLAKVTGLVGLVGIGA--TGCSTDEVLRFGWPVSVTPQAEAMRELWTWSVVAALVVG 65 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + + +R K + +++ +E V+ VP +I+ L T T + + Sbjct: 66 VIVWGLILWAVAFHR--KKSEELPRQVAYNLPLELVLIVVPTVIVAVLFYFTAVTQNYVT 123 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI-------------ATVNEIAFPANTPVY 162 + +T++V+ W W F + + + + + PA V Sbjct: 124 DK----SQDPDVTVDVIGFQWNWEFQHRDAKVEGTDQPVSTVGTSTEIPMLVLPAEKRVR 179 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMA-----GMQTRLHL-IANEPGTYDGISASYSGPGFS 216 F + S V++SFF+P + + + PG++ G A G + Sbjct: 180 FVLRSTDVIHSFFVPEFHFKRDVFPEPEKNNQDNVFQIDQIDRPGSFVGRCAELCGTYHA 239 Query: 217 GMKFKAIATPDRAAFDQWVA 236 M F+ A P A +D+++ Sbjct: 240 VMNFEVRALP-AADYDRYIE 258 >UniRef50_Q05FH0 Cytochrome O ubiquinol oxidase subunit II n=1 Tax=Candidatus Carsonella ruddii PV RepID=Q05FH0_CARRP Length = 252 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 115/206 (55%), Gaps = 2/206 (0%) Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVS 133 K + PN +SN +E +VW +P II FL++ T K++ L P + + KP+ IE+VS Sbjct: 45 KKQIFLPNLINSNCLEILVWFLPTSIIFFLSIYTIKSSIYLNPLNNIYKNIKPLIIEIVS 104 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 +WKW IYP+Q I +NEI P P+ + SNS+MN+ IP++G Q+Y M+ + L Sbjct: 105 TNWKWIIIYPKQKILLLNEICIPLLIPIKMLIISNSLMNTICIPKIGLQMYCMSNYKKSL 164 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 +LIA + G G+S++++G G+S MK + + + F W+ K+ ++ + Sbjct: 165 NLIAIKHGIMHGLSSNFNGIGYSHMKI-CLFSLIKKNFFYWLINIKKKK-IFYNIKNYNF 222 Query: 254 LAAPSEYNQVEYFSNVKPDLFADVIN 279 + S + ++FS LF ++N Sbjct: 223 ITKQSYIDNSKFFSIYNNKLFFLILN 248 >UniRef50_Q0C3D3 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C3D3_HYPNA Length = 322 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 86/266 (32%), Gaps = 63/266 (23%) Query: 36 IGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTV 95 I ++ + + + + + +Y + K K S +SH+ +E V V Sbjct: 36 IAERVHDFHNVLLVIITAITLLVLALIIWIVVRY--NQKANKVSRKFSHNTMIEVVWTVV 93 Query: 96 PILIIIFLAVLTWKTTHAL-----------------------------EPSKPLAHDEKP 126 P LI++ +A L++ + + P A +E Sbjct: 94 PALILVGIAGLSFPNLYYQNVTPNLGQIVATSKQLLADGKSAEHQAYTQNYFPDAAEEGF 153 Query: 127 ITIEVVSMDWKWFFIYP----EQGI---------------------------ATVNEIAF 155 I +++ W W + Y + GI AT + Sbjct: 154 INVKIQGNQWNWTYTYADIVDDAGIPVEFVSNGLHKGTSRDADAPAGALRLLATDYPMVV 213 Query: 156 PANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGF 215 P + V F + V++S+ +P ++ A+ G + EPG Y G + G Sbjct: 214 PEDRYVRFYTAAADVIHSWAVPSFAVKVDAIPGRLNEGWFLVKEPGVYYGQCSELCGVDH 273 Query: 216 SGMKFKAIATPDRAAFDQWVAKAKQS 241 + M + +A FD W K Sbjct: 274 AFMPIEVRVV-SQAQFDAWAEMMKAG 298 >UniRef50_Q9B8D8 Cytochrome c oxidase subunit 2 n=150 Tax=Eukaryota RepID=COX2_CANAL Length = 262 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 94/244 (38%), Gaps = 39/244 (15%) Query: 29 LLDPKGQIGLEQRSLI-LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 L D L F L LI+ + + ++ V KD +++ + + Sbjct: 14 LQDSATPNAEGIHELYDHIMFYLCLILGLVSYILYVII-----KDYKDNRFAYKYVRHGQ 68 Query: 88 VEAVVWTV-PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE-- 144 V ++WT+ P +I++ +A ++ + + +TI+V+ + W W + Y + Sbjct: 69 VIEIIWTIFPAVILLLIAFPSFILLYLCDEVL-----TPAMTIKVIGLQWYWKYEYSDFV 123 Query: 145 ------------------------QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 + + T I P +T + F VT+N V++SF IP LG Sbjct: 124 DSIGETIEFESYVIPDDMLEPGALRLLDTDTSIVVPVDTHIRFVVTANDVIHSFTIPSLG 183 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 +I A G ++ + G Y G + G M K F +W+ + + Sbjct: 184 MKIDATPGRLNQVSALIQRTGVYYGQCSELCGVNHGMMPIKLECV-SIEDFIEWLGENEV 242 Query: 241 SPNT 244 S N+ Sbjct: 243 SLNS 246 >UniRef50_Q6KZG1 Cytochrome c oxidase polypeptide II n=1 Tax=Picrophilus torridus RepID=Q6KZG1_PICTO Length = 272 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 103/259 (39%), Gaps = 25/259 (9%) Query: 30 LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW-------KYRASNKDAKYSPN- 81 L PKG I + + I A+ L IV+ + + K + + P Sbjct: 15 LIPKGSISGDLITSIFLAYILPGIVIGAGFAFWYIYVFIRNWDHIKKKPEEHEDDMRPGR 74 Query: 82 ---WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP------ITIEVV 132 NK V+ V +++I L+++ + A A P + I+V+ Sbjct: 75 IEAIERGNKTLFKVF-VLFVVLILLSLMVYDLPPAYGVRVAGAAPSAPTDNHHYMYIDVI 133 Query: 133 SMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTR 192 W+W FIYP G +T + PA+TP+ F VTS VM+SF++ + +++ A G Sbjct: 134 GYQWQWIFIYPN-GSSTRHFAVLPADTPIQFNVTSVDVMHSFYLINV-TKVDAFPGHYNF 191 Query: 193 LHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE 252 + PG Y G G + M+ A ++QW ++KQ P M+ F+ Sbjct: 192 IWTNITTPGLYYFECVELCGLGHAHMRGPV-AVIPLKQWEQW--ESKQKPGEMNQ--TFD 246 Query: 253 KLAAPSEYNQVEYFSNVKP 271 Y Y + P Sbjct: 247 FFGICQSYGGNRYDGGITP 265 >UniRef50_C6QIT1 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QIT1_9RHIZ Length = 325 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 105/299 (35%), Gaps = 65/299 (21%) Query: 14 SLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 + FAG + L I + SL +++++ + +++ + +++ + Sbjct: 26 AAFAGLGQPTSGELGLQASASPIMDQISSLFHVVNTIIIVITLFVLVLMLWVMFRF---S 82 Query: 74 KDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVV 132 + P+ + N + V WT VPIL+++ +A+ ++ + + +TI+ V Sbjct: 83 EKRNPVPSRTTHNTMLEVAWTIVPILVLVGIAIPSFHLLF-----NQYSFPKPDVTIKAV 137 Query: 133 SMDWKW--------------------------------------------FFIYPEQG-- 146 W W Y + Sbjct: 138 GNAWFWEHEYVDDKVTITSNMVNDEDVLRAKLGDEAYDQKYGALEGTALTEAQYKDSAPI 197 Query: 147 ---------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197 +A EIA P N V VTS V++S+ IP G ++ A+ G + + A Sbjct: 198 WAEDHKLRRLAVDQEIAVPVNKVVTMLVTSADVIHSWTIPSFGVKMQAVPGRTSAVWFKA 257 Query: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 + GT+ G + G S M + D+ +D W+A K + + AA Sbjct: 258 TKLGTFTGQCSVLCGKLHSAMPI-VVRVVDQPVYDSWMAALKAKDRKKAQQILNDDAAA 315 >UniRef50_A7HQK3 Cytochrome c oxidase subunit II n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HQK3_PARL1 Length = 394 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 21/219 (9%) Query: 22 LSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 LSGC+ + LDP G + +L ++ + + + K Sbjct: 183 LSGCSGDLSALDPAGPAARDIAALWWAMLAGSAVLFLLVMGLFAAAMLK----------- 231 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK---PLAHDEKPITIEVVSMDW 136 ++ A W V I++ + VL A + P + P+ IE + W Sbjct: 232 --PGFGSRYAAKTWIVAGGILMPVPVLALLLFFAFAMGERHLPWRGEHNPVRIEARAHMW 289 Query: 137 KWFFIYPEQ--GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 W F Y + T+ + PA V TS++V++ F++PRLG ++ A G + + Sbjct: 290 YWEFHYLDYPDAAPTIGVMHMPAQYDVDVIATSDNVIHGFWVPRLGGKVDATPGHEAAVR 349 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 L A+ PG Y G+ A + G G + M F+ A F Sbjct: 350 LYADRPGAYGGVCAEFCGTGHTTMTFRVEAH-TPEQFRA 387 >UniRef50_C6WU65 Cytochrome c oxidase subunit 2 n=2 Tax=Betaproteobacteria RepID=C6WU65_METML Length = 404 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 117/354 (33%), Gaps = 58/354 (16%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWK 68 G L L + + +P + L+ + ++ ++ + + + + K Sbjct: 10 GFGLLLLLTAPQVFAEIRWNFPEPVTPMALDTLHVHNKFMLIVAVIFVVVLAIMIYSLIK 69 Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFL-----AVLTWKTTHALEPSKPLAHD 123 +R S + + + S E +P +I++ + + + + +E +K + Sbjct: 70 HRKSVGHQAVT-DKAPSTATEIFWTLIPFVILLVIDFIIMGIPAYHSVVMMEDTK----N 124 Query: 124 EKPITIEVVSMDWKWFFIY--------------------------PEQGI---------- 147 E + I++ W+W + Y P+ + Sbjct: 125 ESDMMIKITGSQWRWQYEYAGNTEKGNQNGLIDAKGIKFTSTLSTPQDQVNGTVPPVNDP 184 Query: 148 ------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 N + P V +TS V++++++P+ GS A+ G + ++ G Sbjct: 185 KSPYLLDVDNRLVLPVGAKVRILMTSTDVLHNWWVPQFGSSRVAVPGFIRETWVQVDKAG 244 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYN 261 TY G G G M A P +A + WV + ++ + A E + Sbjct: 245 TYRGQCKELCGKGHGYMPVVVDALP-KAEYAVWVEQKQKEITAQAAGADKEW-----SKD 298 Query: 262 QVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH 315 ++ V + V ++ G G A + G D + +H Sbjct: 299 ELVAQGKVVYEKNCAVCHQVTGAGLPPAFPALTGSKIATSPIFGADGKYLPDSH 352 >UniRef50_Q167W2 Cytochrome c oxidase subunit 2 n=5 Tax=Rhodobacteraceae RepID=Q167W2_ROSDO Length = 304 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 80/233 (34%), Gaps = 57/233 (24%) Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 + A +Y A + +++H VE VPI+I++F+ + + Sbjct: 67 VTALLAWVAIRYNAKRNPE--AASFTHHTPVEIAWTVVPIVILVFIGAFSLPILFKQQ-- 122 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGI----------ATVNEIAFPANTPVY----- 162 E +TI+V W W + Y ++G AT++E A P + V Sbjct: 123 ---EIPEADLTIKVTGYQWYWGYEYVDEGFEFESYMLGSPATLDENARPDDANVTPFVLD 179 Query: 163 ----------------------------------FKVTSNSVMNSFFIPRLGSQIYAMAG 188 +VT+ V++++ IP G + A+ G Sbjct: 180 EHMEAKLIDAGYSRDEFLLATDTSVVVPVGATVVMQVTAADVIHAWTIPSFGVKQDAVPG 239 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 L A G Y G + G + M + A + +W+A A++ Sbjct: 240 RLAELWFNAEREGIYFGQCSELCGFYHAYMPITVKVVSEEA-YAEWLADAREE 291 >UniRef50_A4FAC2 Cytochrome c oxidase subunit 2 n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FAC2_SACEN Length = 302 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 101/294 (34%), Gaps = 35/294 (11%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLD----PKG--QIGLEQRSLILTAFGLMLIVVI 56 + + K G + L +GC + + P+G R L + L V + Sbjct: 1 MPRLVKVTGLIGLVGVAA--TGCTTNEVLRFGWPQGVTPQAESMRQLWTWSVIAALAVGV 58 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP 116 + +R K + + ++ +E + +P ++++ L T T + + Sbjct: 59 LVWGLIFWSVAFHR--KKSEELPRQFQYNLPLEIIYSAIPFVMVVVLFYFTAVTQNYVLA 116 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGI------------ATVNEIAFPANTPVYFK 164 + + VVS W W F YP + + P ++ V + Sbjct: 117 KP----ANPDVKVNVVSFQWNWEFNYPGYKTPDGQPVRTVGSSEEIPLLVLPTDSSVEYH 172 Query: 165 VTSNSVMNSFFIPRLGSQIYAMA-----GMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 ++S V++SFF+P + + G++ G A G S M Sbjct: 173 LSSTDVIHSFFVPEFHFKRDTFPHPDKNNQDNVFQNTIDREGSFVGRCAELCGTYHSMMN 232 Query: 220 FKAIATPDRAAFDQWVA-KAKQSPNTMSDMAAFEKLA--APSEYNQVEYFSNVK 270 F+ A + FDQ++ + + +P T S A E L E + V Sbjct: 233 FEVRAL-SKDKFDQYMQLRTRINPQTGSPYTASEALGEMKCGELCAPRAVTGVP 285 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ABJ2 Ubiquinol oxidase subunit 2 n=150 Tax=Proteobact... 341 2e-92 UniRef50_Q2SXM9 Ubiquinol oxidase, subunit II n=79 Tax=cellular ... 271 3e-71 UniRef50_Q9I427 Ubiquinol oxidase subunit 2 n=143 Tax=Proteobact... 268 2e-70 UniRef50_P57544 Ubiquinol oxidase subunit 2 n=4 Tax=Buchnera aph... 265 2e-69 UniRef50_C0RGA6 Ubiquinol oxidase, subunit II n=37 Tax=Proteobac... 265 2e-69 UniRef50_Q8K993 Ubiquinol oxidase subunit 2 n=6 Tax=Gammaproteob... 263 5e-69 UniRef50_A1BCC4 Ubiquinol oxidase, subunit II n=36 Tax=Proteobac... 261 2e-68 UniRef50_Q0KB46 Bo3-type quinol oxidase, subunit II n=2 Tax=Burk... 261 2e-68 UniRef50_C9YAW0 Ubiquinol oxidase subunit 2 n=1 Tax=Curvibacter ... 261 2e-68 UniRef50_B0UDY1 Ubiquinol oxidase, subunit II n=26 Tax=Proteobac... 260 7e-68 UniRef50_Q4K7G6 Cytochrome o ubiquinol oxidase, subunit II n=1 T... 259 1e-67 UniRef50_C3K1U7 Cytochrome C oxidase (Ubiquinol oxidase) subunit... 256 1e-66 UniRef50_B3QMY7 Ubiquinol oxidase, subunit II n=1 Tax=Chlorobacu... 256 1e-66 UniRef50_C6BF43 Ubiquinol oxidase, subunit II n=10 Tax=Proteobac... 256 1e-66 UniRef50_C5SNE1 Ubiquinol oxidase, subunit II n=1 Tax=Asticcacau... 253 7e-66 UniRef50_Q0BNW9 Cytochrome o ubiquinol oxidase subunit II n=16 T... 252 1e-65 UniRef50_Q1GEA0 Ubiquinol oxidase subunit II n=2 Tax=Proteobacte... 252 1e-65 UniRef50_C6XEZ5 Ubiquinol oxidase, subunit II n=1 Tax=Candidatus... 250 6e-65 UniRef50_Q6F9R5 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 249 9e-65 UniRef50_C8SDL6 Ubiquinol oxidase, subunit II n=1 Tax=Mesorhizob... 249 9e-65 UniRef50_Q2C3Z7 Cytochrome O ubiquinol oxidase subunit II n=3 Ta... 248 1e-64 UniRef50_Q67ML2 Cytochrome c oxidase subunit 2 n=1 Tax=Symbiobac... 248 2e-64 UniRef50_A9IQC4 Ubiquinol oxidase polypeptide II n=1 Tax=Bordete... 248 2e-64 UniRef50_Q5FPP7 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 247 4e-64 UniRef50_B4SM49 Ubiquinol oxidase, subunit II n=4 Tax=Proteobact... 246 8e-64 UniRef50_A4G8I7 Ubiquinol oxidase subunit 2 (Ubiquinol oxidase p... 246 1e-63 UniRef50_A9KG38 Cytochrome c oxidase polypeptide II n=7 Tax=Legi... 245 1e-63 UniRef50_Q0FH64 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 245 2e-63 UniRef50_B1YIW4 Cytochrome c oxidase subunit 2 n=2 Tax=Exiguobac... 243 6e-63 UniRef50_B6YZ13 Ubiquinol oxidase, subunit II n=1 Tax=Pseudovibr... 243 9e-63 UniRef50_C0Z582 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillale... 242 1e-62 UniRef50_C4XNK3 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 241 2e-62 UniRef50_C6CSR8 Quinol oxidase AA3, subunit II n=2 Tax=Paenibaci... 241 2e-62 UniRef50_B0VM15 Cytochrome o ubiquinol oxidase subunit II n=14 T... 240 4e-62 UniRef50_Q89AA3 Ubiquinol oxidase subunit 2 n=1 Tax=Buchnera aph... 239 9e-62 UniRef50_B9KZ00 Cytochrome c oxidase subunit 2 n=1 Tax=Thermomic... 238 2e-61 UniRef50_Q2C912 Cytochrome o ubiquinol oxidase, subunit II n=1 T... 238 2e-61 UniRef50_Q04441 Cytochrome c oxidase subunit 2 n=5 Tax=Bacillus ... 238 2e-61 UniRef50_A1UU71 Cytochrome o ubiquinol oxidase, subunit II n=5 T... 236 8e-61 UniRef50_D0ST29 Ubiquinol oxidase, subunit II n=2 Tax=Acinetobac... 235 2e-60 UniRef50_C6IYW1 Cytochrome c oxidase subunit 2 n=1 Tax=Paenibaci... 234 3e-60 UniRef50_D0D3A4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella ... 233 6e-60 UniRef50_D1C449 Cytochrome c oxidase subunit 2 n=1 Tax=Sphaeroba... 233 9e-60 UniRef50_A0NWL4 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia ... 232 1e-59 UniRef50_Q8L312 Cytochrome bo subunit A n=1 Tax=Vitreoscilla sp.... 231 3e-59 UniRef50_C1PAT6 Quinol oxidase AA3, subunit II n=1 Tax=Bacillus ... 229 8e-59 UniRef50_B9R6J2 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia ... 228 2e-58 UniRef50_A7NPW1 Cytochrome c oxidase subunit 2 n=2 Tax=Roseiflex... 228 2e-58 UniRef50_Q5SLI2 Cytochrome c oxidase subunit 2 n=4 Tax=Thermus R... 227 5e-58 UniRef50_Q8ER77 Cytochrome c oxidase subunit 2 n=1 Tax=Oceanobac... 226 1e-57 UniRef50_P34957 Quinol oxidase subunit 2 n=10 Tax=Bacillales Rep... 225 1e-57 UniRef50_C0Z7C6 Quinol oxidase polypeptide II n=1 Tax=Brevibacil... 225 2e-57 UniRef50_A4A2K3 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopir... 224 4e-57 UniRef50_Q725F6 Quinol oxidase AA3, subunit II n=17 Tax=Listeria... 223 5e-57 UniRef50_Q6MBY6 Probable cytochrome o ubiquinol oxidase chain II... 223 1e-56 UniRef50_A0R9Y2 Quinol oxidase, subunit 2 (Cytochrome c oxidase,... 222 1e-56 UniRef50_C6D2I7 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillale... 222 1e-56 UniRef50_Q81HT3 Quinol oxidase subunit 2 n=80 Tax=Bacillaceae Re... 221 3e-56 UniRef50_A9LGT2 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomy... 221 3e-56 UniRef50_Q2IK63 Cytochrome c oxidase, subunit II n=3 Tax=Anaerom... 218 2e-55 UniRef50_C8WSR0 Cytochrome c oxidase subunit II n=1 Tax=Alicyclo... 218 2e-55 UniRef50_B1ZVF0 Cytochrome c oxidase subunit 2 n=2 Tax=Verrucomi... 218 3e-55 UniRef50_C1F1C9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidobact... 216 1e-54 UniRef50_C8WTG4 Cytochrome c oxidase subunit 2 n=2 Tax=Alicyclob... 216 1e-54 UniRef50_D1RCQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Legionell... 215 2e-54 UniRef50_Q4L565 Probable quinol oxidase subunit 2 n=63 Tax=Bacil... 214 4e-54 UniRef50_A5GCS3 Cytochrome C oxidase subunit II, transmembrane r... 213 7e-54 UniRef50_B2JCA5 Cytochrome c oxidase subunit 2 n=109 Tax=Proteob... 213 8e-54 UniRef50_B9NVN8 CytOchrome o ubiquinol oxidase, subunit II n=2 T... 212 1e-53 UniRef50_A9B5D1 Cytochrome c oxidase subunit 2 n=1 Tax=Herpetosi... 212 1e-53 UniRef50_Q1H1C0 Cytochrome c oxidase subunit 2 n=1 Tax=Methyloba... 212 1e-53 UniRef50_Q01PD2 Cytochrome c oxidase subunit 2 n=1 Tax=Candidatu... 212 1e-53 UniRef50_C6NXQ9 Cytochrome O ubiquinol oxidase subunit II n=1 Ta... 212 1e-53 UniRef50_Q0BPU5 Cytochrome c oxidase subunit 2 n=1 Tax=Granuliba... 212 1e-53 UniRef50_Q2YCN0 Cytochrome c oxidase subunit 2 n=4 Tax=Betaprote... 211 3e-53 UniRef50_A4YQP6 Cytochrome o ubiquinol oxidase, subunit II n=3 T... 211 3e-53 UniRef50_Q04PG8 Cytochrome c oxidase subunit 2 n=7 Tax=Bacteria ... 211 3e-53 UniRef50_C1XKJ9 Cytochrome c oxidase subunit 2 n=2 Tax=Meiotherm... 211 4e-53 UniRef50_D0MDE2 Cytochrome c oxidase subunit 2 n=3 Tax=Rhodother... 209 7e-53 UniRef50_B1HVF0 Quinol oxidase subunit 2 n=6 Tax=Bacillaceae Rep... 209 1e-52 UniRef50_A8IDL7 Cytochrome c oxidase subunit 2 n=29 Tax=Alphapro... 209 1e-52 UniRef50_A9F508 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium... 209 1e-52 UniRef50_D0DDN4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella ... 208 2e-52 UniRef50_D1YAK0 Cytochrome c oxidase subunit 2 n=3 Tax=Propionib... 208 2e-52 UniRef50_B3Q582 Probable cytochrome c oxidase protein, subunit I... 207 3e-52 UniRef50_Q0ABY9 Cytochrome c oxidase subunit 2 n=1 Tax=Alkalilim... 207 5e-52 UniRef50_A4VKM4 Heme/copper-type cytochrome/quinol oxidase, subu... 206 6e-52 UniRef50_Q089E4 Cytochrome c oxidase subunit 2 n=102 Tax=cellula... 206 6e-52 UniRef50_UPI0000510271 cytochrome C oxidase subunit II n=1 Tax=B... 206 8e-52 UniRef50_Q2W5A1 Cytochrome c oxidase subunit 2 n=3 Tax=Magnetosp... 206 9e-52 UniRef50_C1ZF25 Cytochrome c oxidase, subunit II n=1 Tax=Plancto... 206 1e-51 UniRef50_D1CCH9 Cytochrome c oxidase, subunit II n=1 Tax=Thermob... 204 2e-51 UniRef50_B7DNN6 Cytochrome c oxidase subunit II n=1 Tax=Alicyclo... 204 3e-51 UniRef50_Q39Z27 Cytochrome c oxidase subunit 2 n=4 Tax=Geobacter... 204 4e-51 UniRef50_Q3JAA7 Cytochrome c oxidase, subunit II n=3 Tax=Bacteri... 203 5e-51 UniRef50_B5ENJ7 COX aromatic rich domain protein n=4 Tax=Acidith... 203 6e-51 UniRef50_A7H8L3 Cytochrome c oxidase subunit II n=7 Tax=Cystobac... 202 2e-50 UniRef50_Q1NHQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Sphingomo... 201 2e-50 UniRef50_A8TIJ6 Cytochrome c oxidase subunit 2 n=1 Tax=alpha pro... 200 5e-50 UniRef50_C7QBL1 Cytochrome c oxidase subunit 2 n=1 Tax=Catenulis... 200 6e-50 UniRef50_A9WMK9 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococc... 199 9e-50 UniRef50_UPI0001C164F8 cytochrome C oxidase subunit II, transmem... 199 1e-49 UniRef50_Q0AMG7 Cytochrome c oxidase subunit 2 n=2 Tax=Hyphomona... 199 1e-49 UniRef50_Q1V0P2 Cytochrome c oxidase subunit 2 n=2 Tax=Candidatu... 199 1e-49 UniRef50_Q72B26 Cytochrome c oxidase subunit 2 n=6 Tax=Desulfovi... 199 1e-49 UniRef50_Q0VNA0 Cytochrome c oxidase subunit 2 n=2 Tax=Alcanivor... 198 2e-49 UniRef50_Q7USM3 Cytochrome-c oxidase chain II/c n=1 Tax=Rhodopir... 198 2e-49 UniRef50_B6IXF5 Cytochrome c oxidase subunit 2 n=6 Tax=Alphaprot... 197 3e-49 UniRef50_A6WD34 Cytochrome c oxidase subunit 2 n=4 Tax=Actinomyc... 197 4e-49 UniRef50_D2PZ51 Cytochrome c oxidase, subunit II n=1 Tax=Kribbel... 197 4e-49 UniRef50_C1SI89 Cytochrome c oxidase subunit 2 n=1 Tax=Denitrovi... 197 4e-49 UniRef50_Q3A1J0 Cytochrome c oxidase subunit 2 n=2 Tax=Desulfuro... 197 5e-49 UniRef50_C5D863 Cytochrome c oxidase subunit 2 n=87 Tax=cellular... 197 5e-49 UniRef50_C6IYM5 Quinol oxidase subunit II n=2 Tax=Bacillales Rep... 197 5e-49 UniRef50_Q11EK7 Cytochrome c oxidase, subunit II n=3 Tax=Rhizobi... 196 6e-49 UniRef50_Q057E8 Cytochrome o ubiquinol oxidase subunit II n=1 Ta... 196 7e-49 UniRef50_D0KXM7 Cytochrome c oxidase subunit 2 n=1 Tax=Halothiob... 196 7e-49 UniRef50_B4WPA2 Cytochrome c oxidase subunit 2 n=2 Tax=Cyanobact... 196 8e-49 UniRef50_C7NIK2 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococc... 196 8e-49 UniRef50_A6GFM7 Cytochrome c oxidase subunit 2 n=1 Tax=Plesiocys... 196 8e-49 UniRef50_Q7NIL9 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobact... 196 9e-49 UniRef50_Q01R98 Cytochrome c oxidase, subunit II n=1 Tax=Candida... 196 9e-49 UniRef50_B2JRY1 Cytochrome c oxidase, subunit II n=2 Tax=Burkhol... 195 2e-48 UniRef50_B6IRX5 Cytochrome c oxidase subunit 2 n=1 Tax=Rhodospir... 195 2e-48 UniRef50_B0UJY9 Cytochrome c oxidase, subunit II n=6 Tax=Rhizobi... 194 3e-48 UniRef50_A4A0M8 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopir... 194 3e-48 UniRef50_Q0AI63 Cytochrome c oxidase, subunit II n=1 Tax=Nitroso... 194 3e-48 UniRef50_A9F8S3 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium... 193 6e-48 UniRef50_Q1YUZ5 Cytochrome c oxidase subunit 2 n=1 Tax=gamma pro... 193 6e-48 UniRef50_B2S9W4 Cytochrome c oxidase subunit 2 n=61 Tax=Alphapro... 193 6e-48 UniRef50_D2X915 Cytochrome c oxidase subunit II n=1 Tax=Sorangiu... 193 7e-48 UniRef50_C6B875 Cytochrome c oxidase, subunit II n=4 Tax=Rhizobi... 192 1e-47 UniRef50_A0KDK6 Cytochrome c, monohaem n=47 Tax=Burkholderia Rep... 192 2e-47 UniRef50_C1A5N6 Cytochrome c oxidase subunit 2 n=1 Tax=Gemmatimo... 191 2e-47 UniRef50_Q5P900 Chain II protein of putative cytochrome c oxidas... 191 2e-47 UniRef50_C6WU65 Cytochrome c oxidase subunit 2 n=2 Tax=Betaprote... 191 3e-47 UniRef50_A9VZ92 Cytochrome c oxidase, subunit II n=9 Tax=Alphapr... 191 3e-47 UniRef50_B3CN60 Cytochrome c oxidase subunit 2 n=7 Tax=Wolbachia... 191 3e-47 UniRef50_C9YTU0 Cytochrome c oxidase subunit 2 n=1 Tax=Streptomy... 191 3e-47 UniRef50_C8SJH9 Cytochrome c oxidase, subunit II n=1 Tax=Mesorhi... 190 5e-47 UniRef50_A1SLF8 Cytochrome c oxidase subunit 2 n=1 Tax=Nocardioi... 190 7e-47 UniRef50_B8GPT4 Cytochrome c oxidase subunit 2 n=1 Tax=Thioalkal... 190 7e-47 UniRef50_A9WF38 Cytochrome c oxidase subunit 2 n=3 Tax=Chlorofle... 189 7e-47 UniRef50_A6CA06 Cytochrome c oxidase subunit 2 n=1 Tax=Planctomy... 189 8e-47 UniRef50_B1ZMS7 Cytochrome c oxidase subunit 2 n=2 Tax=Opitutace... 189 1e-46 UniRef50_Q3J6Q8 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosoco... 189 1e-46 UniRef50_C6XR85 Cytochrome c oxidase subunit 2 n=1 Tax=Hirschia ... 189 2e-46 UniRef50_B4DA33 Cytochrome c oxidase subunit 2 n=1 Tax=Chthoniob... 188 2e-46 UniRef50_B7KCJ0 Cytochrome c oxidase subunit 2 n=12 Tax=Cyanobac... 188 2e-46 UniRef50_Q9X814 Probable cytochrome c oxidase subunit 2 n=21 Tax... 187 3e-46 UniRef50_Q114N6 Cytochrome c oxidase subunit 2 n=9 Tax=Cyanobact... 187 3e-46 UniRef50_Q47G11 Cytochrome c oxidase subunit 2 n=2 Tax=Betaprote... 187 5e-46 UniRef50_B0RIL0 Cytochrome c oxidase subunit 2 n=6 Tax=Actinobac... 187 5e-46 UniRef50_Q46SU8 Cytochrome c oxidase, subunit II:Cytochrome c, c... 186 7e-46 UniRef50_C1DG42 Cytochrome c oxidase subunit 2 n=5 Tax=Gammaprot... 186 8e-46 UniRef50_A5FXH9 Cytochrome c oxidase, subunit II n=1 Tax=Acidiph... 186 1e-45 UniRef50_D1ATW6 Cytochrome c oxidase subunit 2 n=9 Tax=Anaplasma... 185 2e-45 UniRef50_A4WT84 Cytochrome c, monohaem n=9 Tax=Rhodobacteraceae ... 185 2e-45 UniRef50_P08306 Cytochrome c oxidase subunit 2 n=28 Tax=Rhodobac... 184 2e-45 UniRef50_Q7NMM6 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobact... 184 3e-45 UniRef50_C7MCD6 Cytochrome c oxidase subunit 2 n=1 Tax=Brachybac... 184 3e-45 UniRef50_UPI00016C5496 cytochrome c oxidase, subunit II n=1 Tax=... 184 3e-45 UniRef50_B8H5D8 Cytochrome c oxidase subunit 2 n=6 Tax=Caulobact... 184 4e-45 UniRef50_B8IHG8 Cytochrome c oxidase, subunit II n=2 Tax=Rhizobi... 184 4e-45 UniRef50_Q1NHI1 Cytochrome c oxidase, subunit IIc n=1 Tax=Sphing... 184 5e-45 UniRef50_Q06474 Cytochrome c oxidase subunit 2 n=48 Tax=root Rep... 184 5e-45 UniRef50_Q02BQ9 Cytochrome c oxidase subunit 2 n=3 Tax=Bacteria ... 184 5e-45 UniRef50_Q2YBV3 Cytochrome c oxidase, subunit II n=1 Tax=Nitroso... 183 8e-45 UniRef50_UPI0001C30E64 cytochrome c oxidase, subunit II n=1 Tax=... 182 1e-44 UniRef50_B5ZEX4 Cytochrome c oxidase, subunit II n=2 Tax=Glucona... 182 2e-44 UniRef50_B9KJJ8 Cytochrome c, monoheme n=5 Tax=Alphaproteobacter... 182 2e-44 UniRef50_Q31JY7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechoco... 182 2e-44 UniRef50_Q03736 Cytochrome c oxidase subunit 2 n=11 Tax=Rhodobac... 181 2e-44 UniRef50_C1VBF5 Cytochrome c oxidase subunit 2 n=1 Tax=Halogeome... 181 2e-44 UniRef50_Q47R64 Cytochrome c oxidase subunit 2 n=4 Tax=Streptosp... 181 3e-44 UniRef50_A8LTQ3 Cytochrome c oxidase subunit II n=1 Tax=Dinorose... 181 3e-44 UniRef50_D0LJA9 Cytochrome c oxidase subunit 2 n=1 Tax=Haliangiu... 181 3e-44 UniRef50_A6C0L0 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomy... 181 4e-44 UniRef50_Q1RI44 Probable cytochrome c oxidase subunit 2 n=19 Tax... 181 4e-44 UniRef50_Q2J8B8 Cytochrome c oxidase subunit 2 n=4 Tax=Frankia R... 180 6e-44 UniRef50_B1M0S7 Cytochrome c oxidase, subunit II n=1 Tax=Methylo... 180 7e-44 UniRef50_C6W9F6 Cytochrome c oxidase subunit 2 n=1 Tax=Actinosyn... 179 9e-44 UniRef50_B0RXK0 Cytochrome c oxidase subunit 2 n=13 Tax=Gammapro... 178 2e-43 UniRef50_C5CCB5 Cytochrome c oxidase subunit 2 n=1 Tax=Micrococc... 178 2e-43 UniRef50_C6B8H8 Cytochrome c oxidase, subunit II n=1 Tax=Rhizobi... 178 2e-43 UniRef50_Q3JBQ1 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosoco... 178 2e-43 UniRef50_D1BTQ6 Cytochrome c oxidase subunit 2 n=2 Tax=Micrococc... 177 4e-43 UniRef50_Q2JUD7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechoco... 177 4e-43 UniRef50_Q0C3D3 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomona... 177 5e-43 UniRef50_Q9B8D8 Cytochrome c oxidase subunit 2 n=150 Tax=Eukaryo... 177 5e-43 UniRef50_D2UBE6 Putative cytochrome c oxidase, subunit II protei... 177 6e-43 UniRef50_A5VD54 Cytochrome c oxidase subunit 2 n=3 Tax=Alphaprot... 177 6e-43 UniRef50_D2R8Q4 Cytochrome c oxidase, subunit II n=1 Tax=Pirellu... 177 6e-43 UniRef50_O78682 Cytochrome c oxidase subunit 2 n=572 Tax=cellula... 177 6e-43 UniRef50_Q9MGB5 Cytochrome c oxidase subunit 2 n=19 Tax=Eukaryot... 176 8e-43 UniRef50_A0LTG9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidother... 176 1e-42 UniRef50_B8ES67 Cytochrome c oxidase, subunit II n=1 Tax=Methylo... 176 1e-42 UniRef50_B8EPK1 Cytochrome c oxidase subunit 2 n=1 Tax=Methyloce... 176 1e-42 UniRef50_A4FAC2 Cytochrome c oxidase subunit 2 n=1 Tax=Saccharop... 175 2e-42 UniRef50_Q2TUA5 Cytochrome c oxidase subunit 2 n=37 Tax=Eukaryot... 175 2e-42 UniRef50_P00408 Cytochrome c oxidase subunit 2 n=3968 Tax=root R... 175 2e-42 UniRef50_A5G0I4 Cytochrome c oxidase subunit 2 n=1 Tax=Acidiphil... 175 2e-42 UniRef50_P74044 Cytochrome c oxidase subunit 2 n=1 Tax=Synechocy... 175 2e-42 UniRef50_D2RSI3 Cytochrome c oxidase, subunit II n=1 Tax=Haloter... 174 4e-42 UniRef50_UPI0001C31709 cytochrome c oxidase, subunit II n=1 Tax=... 174 4e-42 UniRef50_Q1J1C4 Cytochrome c oxidase subunit 2 n=2 Tax=Deinococc... 174 5e-42 UniRef50_Q7UI92 Cytochrome c oxidase subunit 2 n=1 Tax=Rhodopire... 173 9e-42 UniRef50_Q9GCK6 Cytochrome c oxidase subunit 2 n=187 Tax=Hexapod... 172 1e-41 UniRef50_C6QIT1 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomicr... 171 2e-41 UniRef50_Q2LCQ6 Cytochrome c oxidase subunit 1+2 n=857 Tax=root ... 171 3e-41 UniRef50_C5CVJ0 Cytochrome c oxidase, subunit II n=1 Tax=Variovo... 170 5e-41 UniRef50_C7P0B0 Cytochrome c oxidase subunit 2 n=3 Tax=Halobacte... 170 5e-41 UniRef50_C8XCY3 Cytochrome c oxidase subunit 2 n=1 Tax=Nakamurel... 170 6e-41 UniRef50_Q1YMW9 Putative cytochrome oxidase subunit II n=1 Tax=A... 170 7e-41 UniRef50_D0LN58 Cytochrome c oxidase, subunit II n=1 Tax=Haliang... 169 1e-40 UniRef50_A5GVD1 Cytochrome c oxidase subunit 2 n=11 Tax=Cyanobac... 168 2e-40 UniRef50_B5INR0 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanobium... 168 3e-40 UniRef50_Q6E775 Cytochrome c oxidase subunit 2 n=9 Tax=Eukaryota... 168 3e-40 UniRef50_Q5V3P5 Cytochrome c oxidase subunit 2 n=1 Tax=Haloarcul... 167 3e-40 UniRef50_A9BE64 Cytochrome c oxidase subunit 2 n=25 Tax=cellular... 167 3e-40 UniRef50_P98054 Cytochrome c oxidase subunit 2 n=4 Tax=Cyanobact... 167 4e-40 UniRef50_A8LYC6 Cytochrome c oxidase subunit 2 n=6 Tax=Actinomyc... 167 4e-40 UniRef50_C6XZ37 Cytochrome c oxidase subunit 2 n=2 Tax=Pedobacte... 167 4e-40 UniRef50_B5U6Z7 Cytochrome c oxidase subunit 2 (Fragment) n=1144... 167 4e-40 UniRef50_Q07JU2 Cytochrome c oxidase, subunit II n=6 Tax=Alphapr... 167 5e-40 UniRef50_B5WPG4 Cytochrome c oxidase, subunit II n=2 Tax=Burkhol... 166 7e-40 UniRef50_B4B7G4 Cytochrome c oxidase subunit 2 n=3 Tax=Cyanobact... 166 9e-40 UniRef50_UPI0000164D05 cytochrome c oxidase, subunit II n=1 Tax=... 166 1e-39 UniRef50_P00405 Cytochrome c oxidase subunit 2 n=1480 Tax=Eukary... 166 1e-39 UniRef50_P00403 Cytochrome c oxidase subunit 2 n=2315 Tax=Fungi/... 165 2e-39 UniRef50_B0C0A3 Cytochrome c oxidase subunit 2 n=1 Tax=Acaryochl... 165 2e-39 UniRef50_A3K373 Cytochrome o ubiquinol oxidase, subunit II n=1 T... 164 4e-39 UniRef50_C7I249 Cytochrome c oxidase subunit 2 n=1 Tax=Thiomonas... 164 4e-39 UniRef50_A5PDP5 Putative cytochrome c oxidase chain II protein n... 164 5e-39 UniRef50_A7BSH7 Cytochrome c oxidase aa3, subunit II n=1 Tax=Beg... 163 6e-39 UniRef50_P24011 Cytochrome c oxidase subunit 2 n=13 Tax=Bacillal... 163 6e-39 UniRef50_C7M190 Cytochrome c oxidase subunit II n=1 Tax=Acidimic... 163 7e-39 UniRef50_B4WI06 Cytochrome c oxidase subunit 2 n=1 Tax=Synechoco... 163 7e-39 UniRef50_Q9TAK4 Cytochrome c oxidase subunit 2 n=1 Tax=Cafeteria... 163 9e-39 UniRef50_Q83GL9 Cytochrome c oxidase subunit 2 n=2 Tax=Tropherym... 163 9e-39 UniRef50_A1ZL76 Cytochrome c oxidase subunit 2 n=1 Tax=Microscil... 162 1e-38 UniRef50_B3RBU3 Cytochrome c oxidase subunit 2 n=28 Tax=Proteoba... 162 1e-38 UniRef50_C5CLF6 Cytochrome c oxidase, subunit II n=5 Tax=Burkhol... 162 2e-38 UniRef50_Q167W2 Cytochrome c oxidase subunit 2 n=5 Tax=Rhodobact... 161 2e-38 UniRef50_A8UU91 Cytochrome c oxidase subunit 2 n=3 Tax=Aquificac... 161 3e-38 UniRef50_P98048 Cytochrome c oxidase subunit 2 n=4111 Tax=Metazo... 161 3e-38 UniRef50_A3IST1 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanothec... 161 3e-38 UniRef50_C1IWC1 Cytochrome c oxidase subunit 2 n=2 Tax=Dermatoph... 161 4e-38 UniRef50_A8B0L6 Cytochrome c oxidase subunit 2 n=23 Tax=Pancrust... 161 4e-38 UniRef50_C6UNA4 Cytochrome c oxidase subunit 2 n=1 Tax=Candidatu... 161 4e-38 Sequences not found previously or not previously below threshold: >UniRef50_P0ABJ2 Ubiquinol oxidase subunit 2 n=150 Tax=Proteobacteria RepID=CYOA_ECOL6 Length = 315 Score = 341 bits (874), Expect = 2e-92, Method: Composition-based stats. Identities = 315/315 (100%), Positives = 315/315 (100%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL Sbjct: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL Sbjct: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG Sbjct: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ Sbjct: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH Sbjct: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 Query: 301 EGMEGMDMSHAESAH 315 EGMEGMDMSHAESAH Sbjct: 301 EGMEGMDMSHAESAH 315 >UniRef50_Q2SXM9 Ubiquinol oxidase, subunit II n=79 Tax=cellular organisms RepID=Q2SXM9_BURTA Length = 377 Score = 271 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 155/288 (53%), Positives = 208/288 (72%), Gaps = 4/288 (1%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCN-SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILM 61 +R+ + LSGC+ +LDPKG IG ++SLI T+ MLIVV+P I + Sbjct: 83 VRRITSRASAILRLGLVAGLSGCSELHVLDPKGAIGAAEKSLIATSTWAMLIVVVPVIFL 142 Query: 62 AVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA 121 + FAW+YRASN++A Y+P W+HS +E V+WTVP LII+FL +LTWKTTHAL+P +P+ Sbjct: 143 TLLFAWRYRASNRNATYAPKWAHSTAIEIVIWTVPSLIILFLGILTWKTTHALDPYRPIE 202 Query: 122 HDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGS 181 KPI +EVV++DWKW F+YPE GIA+VN++A P TP+ F++TS+SVMNSFFIP+LG+ Sbjct: 203 SSVKPIDVEVVALDWKWLFVYPELGIASVNQLAVPVGTPINFRITSDSVMNSFFIPQLGT 262 Query: 182 QIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 Q+YAMAGMQTRLHLIA+EPG + GISA+YSG GFS MKF+ +A R AFD WVAK + S Sbjct: 263 QVYAMAGMQTRLHLIADEPGDFAGISANYSGRGFSDMKFRTLA-TSRDAFDAWVAKVRAS 321 Query: 242 PNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 + + DM A+ +LA PSE V Y+S V LF ++I K+ +G +D Sbjct: 322 ADRL-DMTAYSQLAQPSEKQPVRYYSTVDSRLFHNIIAKYN-NGHVLD 367 >UniRef50_Q9I427 Ubiquinol oxidase subunit 2 n=143 Tax=Proteobacteria RepID=CYOA_PSEAE Length = 331 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 175/313 (55%), Positives = 227/313 (72%), Gaps = 4/313 (1%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M +L WLSL A +LL GC+ L +PKGQ+G+++R+LI+TA LMLIVVIP I+ Sbjct: 1 MTKANPFAALKWLSL-APALLLGGCDMTLFNPKGQVGMDERTLIITATLLMLIVVIPVIV 59 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 M + FAWKYRASN A+Y P+W HSN++EAVVW VP +II L +TW++TH L+P +PL Sbjct: 60 MTLAFAWKYRASNTQAEYKPDWHHSNRIEAVVWLVPCVIIAILGWITWESTHKLDPYRPL 119 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 + KP+TI+ VS+DWKW FIYPEQGIATVNEIAFP +TPV F++TS+SVMNSFFIP+LG Sbjct: 120 DSEVKPVTIQAVSLDWKWLFIYPEQGIATVNEIAFPKDTPVNFQITSDSVMNSFFIPQLG 179 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 SQIY+MAGM T+LHLIANE G +DGISA+YSG GFSGM+FKAIAT ++ F WVAK K Sbjct: 180 SQIYSMAGMMTKLHLIANEEGVFDGISANYSGGGFSGMRFKAIATSEQG-FQDWVAKVKA 238 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 +P ++S + + +L PSE YFS+V P+LF ++ K+ HG + E + H Sbjct: 239 APASLS-IGTYPELVKPSENVPPTYFSSVSPELFGHILTKYEHHGDAKGAAHGEHAGAEH 297 Query: 301 E-GMEGMDMSHAE 312 E M G DM + Sbjct: 298 EAAMTGHDMQDMD 310 >UniRef50_P57544 Ubiquinol oxidase subunit 2 n=4 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=CYOA_BUCAI Length = 296 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 139/295 (47%), Positives = 191/295 (64%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 + LSL L+GCN+ LL+ G I E+ SLIL +F +ML ++IP I M + F+ KY Sbjct: 1 MKTLSLILIFFFLNGCNNPLLNSHGTIATEEYSLILISFIMMLFIIIPVIFMTIYFSLKY 60 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R++N + Y PNW S K+E VVWT+PI+I+ FLA L+W TH L+P K + PI I Sbjct: 61 RSTNVNQIYKPNWCDSKKIEIVVWTIPIIIVSFLAFLSWSYTHKLDPKKSIVSLNNPIKI 120 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 + V++DWKW FIYP+ IAT+NEI FP N P+ F++TSNSVMN+FFIP LGSQIYAM GM Sbjct: 121 DAVALDWKWLFIYPDYNIATINEIMFPVNRPIVFRITSNSVMNAFFIPSLGSQIYAMPGM 180 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 T+L+LIAN+ G Y GIS++YSG GFS MKF AI+ + F WV K + S ++ M Sbjct: 181 TTKLNLIANDVGKYKGISSNYSGHGFSNMKFTAISVLKNSTFLDWVKKVQASSIKLNTMK 240 Query: 250 AFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGME 304 F+ ++ P+E +EYFS+VK +LF + N++ +D + ME Sbjct: 241 TFDIISIPNENYSIEYFSSVKKNLFNKIKNQYSIKHFILDENLSHEIVKKNFNME 295 >UniRef50_C0RGA6 Ubiquinol oxidase, subunit II n=37 Tax=Proteobacteria RepID=C0RGA6_BRUMB Length = 342 Score = 265 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 148/304 (48%), Positives = 202/304 (66%), Gaps = 5/304 (1%) Query: 7 NKSLGWLSLFAGTVLLSGC-NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 +++ ++ A + L+GC N LLDPKGQ+GLE+R LIL A G+ML+VV+P IL + F Sbjct: 6 PRTIVSFAVLALSAFLAGCQNQVLLDPKGQVGLEERDLILFATGIMLLVVVPVILATLFF 65 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 AWKYRA+N+ A Y P+W HS K+E VW +P+ II+ L +TW +TH L+P +PL + K Sbjct: 66 AWKYRATNEKADYQPDWHHSTKIELAVWLIPMAIIVVLGTVTWISTHKLDPYRPLESNVK 125 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 PI +EVV++DWKW FIYP+QGIATVNE+A P N PV FK+TS+++MNSFFIP+LGSQ+Y Sbjct: 126 PINVEVVALDWKWLFIYPDQGIATVNEMAMPVNVPVNFKLTSSNLMNSFFIPQLGSQVYT 185 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 M MQT+LHLIAN+ G + GISA+YSG GF+ M+FKA A D+A FD+WVA K Sbjct: 186 MPSMQTKLHLIANQEGDFAGISANYSGQGFAQMRFKAHA-FDQAGFDKWVADVKAQAAAK 244 Query: 246 S---DMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEG 302 D A + L PSE + V+YF+ LF D++N+ + + E Sbjct: 245 GEDLDRARYASLVQPSEKHAVQYFNYGDKALFHDIVNRCWDGKSVCLDDEMHRQQMIREA 304 Query: 303 MEGM 306 + Sbjct: 305 RASL 308 >UniRef50_Q8K993 Ubiquinol oxidase subunit 2 n=6 Tax=Gammaproteobacteria RepID=CYOA_BUCAP Length = 290 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 143/290 (49%), Positives = 196/290 (67%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M +N L L L GC+S L +P G I +++ S++L +F +ML V+IP I Sbjct: 1 MISINFNNFFKTLLLILIAFTLHGCDSILFNPHGIIAIQECSILLISFLIMLFVIIPVIF 60 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 M + F+ KYRASN +AKY P+W S K+E +VWT+PI II+FLA +TW +H L+P K + Sbjct: 61 MTIYFSVKYRASNINAKYKPDWCDSKKIEIIVWTIPISIILFLAFVTWNYSHILDPKKSI 120 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 KPI I+VVS+DW+W FIYPE IAT+NEI FP N + F +TSNSVMNSFFIP LG Sbjct: 121 ISKYKPIKIDVVSLDWRWLFIYPEYHIATINEIMFPINRSIIFHITSNSVMNSFFIPSLG 180 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 SQIYAM GM T L+L++N PG Y GIS++YSG GFS MKF AI+ + F+ W+ KA+Q Sbjct: 181 SQIYAMPGMMTTLNLMSNSPGKYKGISSNYSGKGFSNMKFTAISVLNIKDFENWIKKAQQ 240 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDM 290 SP ++ M+ F ++ P+E + +EYFS+VK +LF ++IN+ + K Sbjct: 241 SPKKLNKMSIFNIISLPNENHFIEYFSDVKKNLFYEIINQTYSKNKVFKH 290 >UniRef50_A1BCC4 Ubiquinol oxidase, subunit II n=36 Tax=Proteobacteria RepID=A1BCC4_PARDP Length = 400 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 135/317 (42%), Positives = 190/317 (59%), Gaps = 12/317 (3%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 Y + L A + L+ C + +L P G + QR L++ + LML++++P +++ V F Sbjct: 3 YIRKFARLPWLALLIPLAACKAEVLAPAGDVAARQRDLLVISTLLMLLIIVPVMVLTVVF 62 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA---- 121 A +YR NKDA Y P+W HS K+E V+W P+LIII L LTW TH L+P +PL Sbjct: 63 ARRYRERNKDADYRPDWDHSTKLEFVIWGAPLLIIITLGALTWVGTHLLDPYRPLDRISA 122 Query: 122 -----HDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 + +P+ ++VV+MDWKW FIYPEQGIA+VNE+A P + PV F +TS SVMN+F+I Sbjct: 123 DRPLTEEHRPLPVQVVAMDWKWLFIYPEQGIASVNEMAVPVDRPVEFTLTSTSVMNAFYI 182 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 P + IYAM GM+T+L+ + N PG Y GI++ YSG GFSGM FKA A D A FD W+ Sbjct: 183 PAMAGMIYAMPGMETKLNGVFNHPGEYKGIASHYSGHGFSGMHFKAHA-TDEAGFDAWIE 241 Query: 237 KAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGE 296 KA+ S T+ D + +L APSE F+ V P LF ++N + GK + Sbjct: 242 KARASGGTL-DRPRYLELEAPSENVPPMSFAEVDPHLFQRIVNMCVEPGKICMAEMMALD 300 Query: 297 HSAHEGMEG-MDMSHAE 312 G+ G M+M+ Sbjct: 301 AQGGTGLAGTMNMTRLT 317 >UniRef50_Q0KB46 Bo3-type quinol oxidase, subunit II n=2 Tax=Burkholderiaceae RepID=Q0KB46_RALEH Length = 330 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 134/272 (49%), Positives = 190/272 (69%), Gaps = 3/272 (1%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 GCN LL+PKG IG +++SLIL + +ML+VVIP I++ + FAW+YR +N A Y+P W+ Sbjct: 43 GCNLELLNPKGSIGEQEKSLILISLFVMLMVVIPVIVLTLWFAWRYRETNTSATYAPKWA 102 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 HS ++E VVW +P +I+ LAVL W +TH L+P +PL KP+ ++V++++WKW FIYP Sbjct: 103 HSTRIEVVVWGIPCVIVACLAVLIWDSTHKLDPYRPLESQVKPVQVDVIALNWKWLFIYP 162 Query: 144 EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 E G+A++N++A P TPV F++T+ S+MNSFFIP+LGS +YAMAGMQTRLHLIA+ PG Y Sbjct: 163 EYGVASLNQLAIPVGTPVNFRLTAESMMNSFFIPQLGSMVYAMAGMQTRLHLIADTPGVY 222 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQV 263 G SA+YSGPGFS M FK +A R FD W+ A+ S + D+ + L PS + V Sbjct: 223 LGQSAAYSGPGFSDMHFKTLA-TSRKEFDAWIQAARASSQAL-DLKTYRTLELPSSKDPV 280 Query: 264 EYFSNVKPDLFADVINKFM-AHGKSMDMTQPE 294 ++ V P LF V++K+M +G+ PE Sbjct: 281 TLYAAVAPKLFDQVVDKYMLENGQICRADTPE 312 >UniRef50_C9YAW0 Ubiquinol oxidase subunit 2 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAW0_9BURK Length = 373 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 137/312 (43%), Positives = 186/312 (59%), Gaps = 12/312 (3%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSAL-LDPKGQIGLEQRSLILTAFGLMLIVVIPAI 59 M K + L WL+ A L+GC+ A+ L+P G I +Q +++TA LMLI+++P I Sbjct: 26 MFKLKAFRKLSWLAAMAMAAGLTGCSKAVVLNPAGDIAAQQGQMVITATLLMLIIIVPVI 85 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 + + FAWKYR SN +A+Y P W HS +E V+WTVP+LIII L LTW TH L+P +P Sbjct: 86 ALTLFFAWKYRQSNTEAEYDPEWHHSTSLELVIWTVPLLIIIALGALTWIGTHKLDPYRP 145 Query: 120 LA---------HDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSV 170 L D KP+ ++VV+MDWKW F YPEQGIATVNE+A P + P+ FK+T+ S Sbjct: 146 LDRIDAQRPLPADAKPMEVQVVAMDWKWLFFYPEQGIATVNELAAPVDRPILFKLTATST 205 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAA 230 MN+F++P L IYAM GMQT L+ + N PG + G+S+ YSG GFSGM FK Sbjct: 206 MNAFYVPDLAGMIYAMPGMQTELNAVINRPGVFKGMSSHYSGAGFSGMTFKFHGL-SNED 264 Query: 231 FDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDM 290 F WV KAK T+ D A + L PSE + V+ FS V+ L+ V+N+ + GK Sbjct: 265 FAAWVNKAKTEGKTL-DKATYTNLVKPSERDPVQRFSTVEAGLYDKVLNRCVEDGKMCMH 323 Query: 291 TQPEGEHSAHEG 302 + Sbjct: 324 HMMAIDARGGNA 335 >UniRef50_B0UDY1 Ubiquinol oxidase, subunit II n=26 Tax=Proteobacteria RepID=B0UDY1_METS4 Length = 426 Score = 260 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 135/328 (41%), Positives = 191/328 (58%), Gaps = 21/328 (6%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 + G L AG+ L+GCN +++P G + ++QR+LIL + LML+V++P I + Sbjct: 32 RAGLRAGALLAVAGS--LAGCNLVVMNPSGDVAIQQRNLILASTALMLLVIVPVIALTFV 89 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 FAW+YRASN DA Y P+W HS ++E V+WTVP+LIII L +TW +TH L+P +PLA Sbjct: 90 FAWRYRASNHDAPYDPDWHHSTQLEVVIWTVPLLIIIALGAMTWVSTHTLDPYRPLARIG 149 Query: 125 KP---------ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFF 175 + ++VV++DWKW F+YP+ GIATVNE+A PAN P+ FK+TS+SV N+F+ Sbjct: 150 PNKPVPPGIDHLNVQVVALDWKWLFLYPDLGIATVNEMAAPANVPIAFKITSSSVWNTFY 209 Query: 176 IPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 +P L IYAM GMQT LH + N G + G SA YSG GFS M F + + FD WV Sbjct: 210 VPALAGMIYAMPGMQTNLHAVMNHEGDFRGQSAHYSGSGFSRMNFDFRSL-SQQGFDAWV 268 Query: 236 AKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEG 295 AK K S + D AA+ L PSE + V Y+ V+ L+ ++ + G+ Sbjct: 269 AKVKASGTAL-DRAAYLALEKPSEADPVRYYGRVESGLYDAILGLCVEPGRMCVAEMHHI 327 Query: 296 EHSAHEGMEGM--------DMSHAESAH 315 + + G + D ES H Sbjct: 328 DKAGGAGRDSEANRDRLDYDNRRLESGH 355 >UniRef50_Q4K7G6 Cytochrome o ubiquinol oxidase, subunit II n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K7G6_PSEF5 Length = 303 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 138/298 (46%), Positives = 205/298 (68%), Gaps = 4/298 (1%) Query: 13 LSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 + L A LLS CN + +PKGQI ++R+LI+ A GLML+VVIP I++ FAW+YR++ Sbjct: 7 ILLVAACGLLSACNLIVFNPKGQIATDERNLIILATGLMLLVVIPVIVLMFVFAWRYRST 66 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVV 132 +K A+YSP W+ S+++EAVVW VP++II+ L ++TW+TTH+L+P KP+A D P+ ++VV Sbjct: 67 SKRARYSPGWASSHRIEAVVWGVPLVIIVILGIVTWRTTHSLDPYKPIASDNPPLNVQVV 126 Query: 133 SMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTR 192 + DWKW FIYP+ GIA+VNE+A P +TPV F +TS++ M SFFIP LG QIYAMAGMQTR Sbjct: 127 ATDWKWLFIYPDLGIASVNELALPVHTPVSFTITSDAAMTSFFIPALGGQIYAMAGMQTR 186 Query: 193 LHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE 252 LHLIANE G + GI+A+Y+GPGFS M F + A F+ WV + +Q P + D ++ Sbjct: 187 LHLIANETGQFRGIAANYNGPGFSDMHFTTQS-QTPAQFEAWVQRVRQGPLRL-DQQSYA 244 Query: 253 KLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGK--SMDMTQPEGEHSAHEGMEGMDM 308 L+ P+ + ++++++V+P LF +++K+ K ++ E D+ Sbjct: 245 VLSRPTLGHPIQHYASVEPGLFQVIVDKYEGMNKARGSARQAARADNPLGEARSSDDV 302 >UniRef50_C3K1U7 Cytochrome C oxidase (Ubiquinol oxidase) subunit II n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K1U7_PSEFS Length = 331 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 165/302 (54%), Positives = 216/302 (71%), Gaps = 2/302 (0%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M +Y + LG+L L ++L GC L+DPKGQIGL+QR+LI+TA LML+VV+P I+ Sbjct: 19 MSKNRYPRLLGFLPLLGMMLMLGGCKWTLMDPKGQIGLDQRNLIITATLLMLLVVVPVII 78 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 M FAWKYRASN +A Y+P WSHS K+E VW VPILIII L +T+K+TH L+P +PL Sbjct: 79 MTFAFAWKYRASNTNATYAPKWSHSTKIEIAVWLVPILIIIALGYITYKSTHELDPYRPL 138 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 D KPI IEVV++DWKW FIYP+ GIATVN+I FP NTP+ F++TS++VMNSFFIP LG Sbjct: 139 ESDVKPINIEVVALDWKWLFIYPDLGIATVNQIRFPENTPLNFRITSDAVMNSFFIPALG 198 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 QIYAMAGMQTRLHLIANE +GISA+YSG GF+GMKFKAI+ + F+ WVA+ K Sbjct: 199 GQIYAMAGMQTRLHLIANEKAEMEGISANYSGAGFTGMKFKAIS-TSQEDFNAWVAEVKA 257 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 +P + D A ++ L PS+ N V +S +P+LF +++K+ + + E +A Sbjct: 258 APKQL-DQAEYDALTKPSQNNPVALYSTYEPNLFQKIVDKYEGMKPGKPVKHEKKEVAAV 316 Query: 301 EG 302 EG Sbjct: 317 EG 318 >UniRef50_B3QMY7 Ubiquinol oxidase, subunit II n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QMY7_CHLP8 Length = 302 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 145/304 (47%), Positives = 200/304 (65%), Gaps = 7/304 (2%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCN-SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAI 59 MR SLF + +L+GCN + PKG + ++ LI TAFGLMLIVVIP + Sbjct: 1 MRKNNAYALFKAFSLFFTSFILTGCNKMVVFQPKGPVARDEALLIYTAFGLMLIVVIPVL 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 +MA+GFA +YRASN A Y PNW++S KVE +VW VP++I+ FL+ LTW T L+P KP Sbjct: 61 VMAIGFAIRYRASNDKATYKPNWANSIKVELIVWLVPVIIVAFLSWLTWTGTFRLDPYKP 120 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 +A + KP+ +EVVS+DW W FIYP+ IATVNE+ PA+TP+ F++TS +VM SF++P+L Sbjct: 121 IAAEAKPLRVEVVSLDWNWLFIYPDYNIATVNELVLPAHTPLNFRLTSATVMTSFYVPQL 180 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 GSQ+YAMAGMQT+LHL+A+E GT+DG + +SG G++ M FK I F WV A+ Sbjct: 181 GSQMYAMAGMQTQLHLLADETGTFDGHNREFSGKGYATMHFKTI-VKTPEEFQVWVQNAR 239 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMA----HGKSMDMTQPEG 295 Q+ N +S MA ++ LA P+ + V +S V P LF ++ +F G MTQP G Sbjct: 240 QTANALS-MAEYKALAEPNSNHPVTVYSPVVPGLFDHIVGQFTGWMGADGAMKSMTQPNG 298 Query: 296 EHSA 299 + Sbjct: 299 KAHE 302 >UniRef50_C6BF43 Ubiquinol oxidase, subunit II n=10 Tax=Proteobacteria RepID=C6BF43_RALP1 Length = 340 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 155/284 (54%), Positives = 209/284 (73%), Gaps = 7/284 (2%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 GCN +LDPKG I E+++LIL A GLML+VVIP I++ + FAWKYRASN A+Y P+WS Sbjct: 35 GCNLTVLDPKGMIAAEEKTLILVATGLMLLVVIPVIVLTLVFAWKYRASNTKARYEPDWS 94 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 HSN +EAVVW +P LIII L V+T+K+THAL+P KP+ D KPIT+E VS+DWKW FIYP Sbjct: 95 HSNAIEAVVWLIPCLIIIVLGVITYKSTHALDPYKPIESDVKPITVEAVSLDWKWLFIYP 154 Query: 144 EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 E IATVN++AFPANTP+ FK+TS++VMN+FFIP+LGSQ+YAMAGMQT+LHLIANE G + Sbjct: 155 ELKIATVNQLAFPANTPINFKITSDTVMNAFFIPQLGSQVYAMAGMQTKLHLIANETGVF 214 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQV 263 DG+S++YSG GF+GMKFKA A + FD WV + + S ++ + +L+ PSE Sbjct: 215 DGMSSNYSGSGFTGMKFKATAMTN-EEFDAWVKQVRASSQNLTKEG-YAELSKPSEKVPP 272 Query: 264 EYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMD 307 +++V P L+ +++K+M M + E + E +EG + Sbjct: 273 AAYASVDPMLYHSILHKYMDK-----MGEGEKVLTLDEALEGAN 311 >UniRef50_C5SNE1 Ubiquinol oxidase, subunit II n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SNE1_9CAUL Length = 341 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 148/288 (51%), Positives = 189/288 (65%), Gaps = 7/288 (2%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 K L + V LSGC+ AL+DPKG +GL Q+ LI+ A LMLI V+P I+M Sbjct: 9 RNLIRKGLIAGLMVTAAVSLSGCDWALMDPKGPVGLAQKDLIILATLLMLIPVVPVIVMT 68 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH 122 + FAW+YRASN A Y PN+ HSN++EAVVW +P LIII L +TW +TH L+P K + Sbjct: 69 LWFAWRYRASNTKATYDPNFEHSNRIEAVVWAIPTLIIIALGTVTWISTHELDPHKKVEA 128 Query: 123 DEK-----PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 PI ++VV++DWKW FIYP+ GIATVNE+A P PV+F++TS SVMNSFFIP Sbjct: 129 AADKVGVTPIEVQVVALDWKWLFIYPQYGIATVNEMAMPVGVPVHFEITSASVMNSFFIP 188 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 +LG+QIYAM GMQT L L A+ G YDGISA+YSG GF+ MKFKA A D+ FD WVA Sbjct: 189 QLGTQIYAMNGMQTHLSLRADHAGVYDGISANYSGFGFAEMKFKAKAV-DQTGFDAWVAS 247 Query: 238 AKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 AK S T+ D A++ L S Y++ V+P LF ++N G Sbjct: 248 AKASGQTL-DTGAYKTLHQKSTLKAPAYYAAVQPALFTKILNGCADGG 294 >UniRef50_Q0BNW9 Cytochrome o ubiquinol oxidase subunit II n=16 Tax=Francisella RepID=Q0BNW9_FRATO Length = 300 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 138/307 (44%), Positives = 184/307 (59%), Gaps = 11/307 (3%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 + K L LS G + LSGC + +P G I +++ L++ A LML VV+P I++ + Sbjct: 2 NWKKYLLILSSVVGVLSLSGCKGGIWNPMGVITAQEKQLLIFAIVLMLFVVVPVIILILC 61 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 FAWKYR +A+Y P WSHSNK+E + W VP +II+ LA++TWKTTH+L P KPL D+ Sbjct: 62 FAWKYR-DGANAEYRPTWSHSNKLEIICWGVPFIIILILAIVTWKTTHSLSPYKPLESDK 120 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 KP+ I+VV+++WKW FIYPE IATVN I P + P+ FK+TS + MNSFFIP L QIY Sbjct: 121 KPVEIDVVALNWKWMFIYPEYDIATVNYIEIPKDRPINFKITSAAPMNSFFIPELAGQIY 180 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 AM GM T+LHLIA G Y G SA+Y+G GF+ M+F A D+A FD+WV K + Sbjct: 181 AMTGMTTQLHLIATHEGKYRGFSANYTGIGFAEMEFFAK-VTDQADFDKWVKDVKNGKHQ 239 Query: 245 MSDMAAF-EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGM 303 F L S N V Y+S+V +LF D++ +M M Sbjct: 240 SLTWDYFWSDLFKDSIDNPVAYYSHVDKNLFNDIVMSYMMPNYKPGDMA--------SNM 291 Query: 304 EGMDMSH 310 GM M H Sbjct: 292 SGMHMHH 298 >UniRef50_Q1GEA0 Ubiquinol oxidase subunit II n=2 Tax=Proteobacteria RepID=Q1GEA0_SILST Length = 363 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 133/298 (44%), Positives = 185/298 (62%), Gaps = 11/298 (3%) Query: 8 KSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 + L +L + LSGCN LL P G I +Q LI+ + LMLIV+IP + + V FA+ Sbjct: 2 RYLRFLCCALAFLTLSGCNLVLLSPSGDIAAQQGDLIVYSTVLMLIVIIPVMALTVFFAF 61 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS---------K 118 KYRA NKDA+Y P+W HS +E VVW VP+ III LA LTW TH LEP K Sbjct: 62 KYRAENKDARYEPDWDHSVSLEIVVWFVPLAIIICLAGLTWVATHRLEPYDDLRRVSETK 121 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 P+ + +P+ ++VV++DWKW FIYPE G+ATVNE A + PV +K+TS++VMN+F+IP Sbjct: 122 PIDPNVEPMEVQVVALDWKWLFIYPEYGVATVNEAAAIVDRPVEWKLTSSTVMNAFYIPE 181 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 + IYAMAGM+T L+ + NEPGT++G SA+YSG GFS M+F IA D A F+ W+ + Sbjct: 182 MAGMIYAMAGMETELNAVINEPGTFEGFSANYSGNGFSHMRFDFIAE-DEAGFEAWIEEV 240 Query: 239 KQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGE 296 + S T+ D ++ L PS ++VEYF V+ L+ ++N + Sbjct: 241 RASGMTL-DQDSYAVLEQPSVAHEVEYFGAVEDGLWDKILNMCAGPNALCLNDMMMVD 297 >UniRef50_C6XEZ5 Ubiquinol oxidase, subunit II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XEZ5_LIBAP Length = 332 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 125/301 (41%), Positives = 181/301 (60%), Gaps = 11/301 (3%) Query: 20 VLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 V+LSG ++DP G I L+Q SLI A LML++V+P + FAWKYR++NK A+Y Sbjct: 26 VMLSGFEFIVMDPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYD 85 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA---------HDEKPITIE 130 P W HS +E VW VP++I+ FLAV+TW TH ++P PL + KP+ +E Sbjct: 86 PKWCHSTLLELFVWLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVE 145 Query: 131 VVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 VV++DWKW F+ PEQ +A +NE+ P + P+ F++T++SVMNSF+IP L QIYAMAGM+ Sbjct: 146 VVALDWKWLFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGME 205 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 T+LH + N+ G Y G SA+YSG GFS M+FK F+ W++K K+ + + Sbjct: 206 TKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYG-KSEKGFEDWISKVKRQGTFL-NRQE 263 Query: 251 FEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSH 310 + L PSE + V YFS ++ L+ ++N + GK + GM G+D Sbjct: 264 YLLLKKPSERDSVRYFSPIEKGLYYSILNLCVHPGKICMDEMMRIDALGGGGMRGIDRHS 323 Query: 311 A 311 Sbjct: 324 L 324 >UniRef50_Q6F9R5 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F9R5_ACIAD Length = 353 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 147/332 (44%), Positives = 197/332 (59%), Gaps = 46/332 (13%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAV 63 L LSL LL+GC LL+ KG +G Q +L++TA LML+VVIP+++MA+ Sbjct: 2 RQTILAVLSLSTIAALLTGCGGDMVLLNSKGPVGQGQSNLMMTAIYLMLLVVIPSVIMAL 61 Query: 64 GFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD 123 F+WKYRASNKDA Y P W+HS +E VVW VP++II LA LTW +H +P +PL D Sbjct: 62 WFSWKYRASNKDADYKPTWAHSTAIEIVVWGVPVIIIGILAWLTWWGSHKYDPYRPLESD 121 Query: 124 EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQI 183 + P+TI+V++ +KW F+YPEQ IATVNE+ FP TP+ FK+TSN MNSFFIP+LG QI Sbjct: 122 KAPLTIQVIAEQFKWIFVYPEQNIATVNEVRFPEKTPLSFKITSNFTMNSFFIPQLGGQI 181 Query: 184 YAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPN 243 YAMAGMQT LHL+A++PG + G+S++YSG GFS M FKA + A F QWV K Sbjct: 182 YAMAGMQTHLHLMADQPGVFRGMSSNYSGYGFSQMHFKAYSV-TEAEFTQWVDAVKAGKG 240 Query: 244 TMSDMAA------------------------------------FEKLAA-------PSEY 260 T + A E LA P++ Sbjct: 241 TGVNPEAIQKGILDQAELATLKDGDRSKHQIEALVHRAQAAGDAEALAKAEAMKPFPNKP 300 Query: 261 NQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ 292 + V Y+S+V+P LF VIN++M++ D + Sbjct: 301 HPVTYYSSVEPKLFETVINRYMSNYHGADHSA 332 >UniRef50_C8SDL6 Ubiquinol oxidase, subunit II n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SDL6_9RHIZ Length = 340 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 115/293 (39%), Positives = 177/293 (60%), Gaps = 5/293 (1%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 K + L W+ A GC +LDP+G IG R+++L + +ML++V+P ++ + Sbjct: 29 KPGRQLFWVPAIA---FFPGCAGGVLDPQGPIGSGNRTILLNSLAVMLVIVVPTLVALLA 85 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 FAWK+RASN +A+Y P +++S ++E +VW++P L I FL L + ++ L+P KP+ + Sbjct: 86 FAWKFRASNSNARYDPEFTYSGRIELIVWSIPTLTIFFLGGLIYYGSYQLDPRKPIPSAQ 145 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 P+ I+VV++DWKW F+YPEQG+ VN++ PA PV+FK+TS SVMN+FF+P+LGS +Y Sbjct: 146 PPLDIQVVALDWKWLFLYPEQGVGAVNQLVIPAGVPVHFKLTSASVMNTFFVPQLGSMVY 205 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 M GMQT LHL A+ G++ G SA +SG GFS M F A AF +W + + Sbjct: 206 VMNGMQTELHLQADREGSFYGQSAHFSGDGFSDMNFSVSAV-SADAFARWASSLRGGGGV 264 Query: 245 MSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEH 297 ++ A + +LA S F +V+P LF V + + G + GE Sbjct: 265 LNANA-YRELARQSTNVAPSTFGHVQPGLFDAVAQQTLPPGPGPAESAAGGEP 316 >UniRef50_Q2C3Z7 Cytochrome O ubiquinol oxidase subunit II n=3 Tax=Vibrionaceae RepID=Q2C3Z7_9GAMM Length = 295 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 147/296 (49%), Positives = 196/296 (66%), Gaps = 9/296 (3%) Query: 1 MRLRKYNKS----LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 M++ + K L LS+ T + + N L D KG IG Q SLI+T+ LM I+++ Sbjct: 1 MKITRSRKVGITILATLSVALLTFIFTSSNMVLFDSKGSIGQAQSSLIITSVLLMAIIIV 60 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP 116 P +LM+V F +KYR SNKDA+Y PNW HS K+E +VW VP LII+ L +T++T+++L+P Sbjct: 61 PVLLMSVYFPYKYRHSNKDAEYKPNWEHSTKIEVIVWAVPCLIILALGWITYQTSYSLDP 120 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 K +A +EKP+TI+VV+M+WKW FIYPEQ IATVNEIA P N PV F VTS++ MNSFFI Sbjct: 121 RKEIASEEKPLTIQVVAMNWKWLFIYPEQQIATVNEIALPVNRPVRFLVTSDTTMNSFFI 180 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 P+LGSQ+YAMAGM+ RLHL+A E G Y GISA+YSG GF+ MKFKA A + A F+QWV Sbjct: 181 PQLGSQVYAMAGMENRLHLMAEEKGVYRGISANYSGFGFTNMKFKAHAVDN-ADFEQWVQ 239 Query: 237 KAKQSPNTMSD----MAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM 288 K K S ++D + + V YF++V P F D+I K + Sbjct: 240 KVKASDKVLNDSSYAVLTANAKEQIKTAHPVTYFASVDPLRFKDIIEKHAGVQNGL 295 >UniRef50_Q67ML2 Cytochrome c oxidase subunit 2 n=1 Tax=Symbiobacterium thermophilum RepID=Q67ML2_SYMTH Length = 342 Score = 248 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 21/288 (7%) Query: 13 LSLFAGTVLLSGCN---SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 ++ +VLL+GC+ LDPKG + Q L+L + + + I + +++ Sbjct: 14 AAILLASVLLAGCSTLPQTPLDPKGPVAQMQTGLLLYTLYIAMGIGISVTAALLYVVFRF 73 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 RA ++ +E + +P+LI++ +A T + + E +T+ Sbjct: 74 RARPGLTGVPVQIRGNHVLEIIWTVIPVLILVSVAFPTVEAAFST-----AVPPEGAMTV 128 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 W + F YPE GI T NE+ PA P+ ++TSN V++SF++P+L + + G Sbjct: 129 RATGYRWWFAFEYPELGIVTANELRIPAGQPIRLELTSNDVIHSFWVPKLAGKTDMIPGR 188 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 + A+EPG Y G A + G + M+F+ A P FD+WV + + S+++ Sbjct: 189 VNIAWIQADEPGVYLGQCAEFCGDSHANMRFQVRAMP-PEQFDEWVRQRQAMAQGPSELS 247 Query: 250 AFEK------------LAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 A A + + V P+L +A G Sbjct: 248 AVAARGRELFESNVGNCFACHAVDGTKAQGVVGPNLTDVGQRSTLAAG 295 >UniRef50_A9IQC4 Ubiquinol oxidase polypeptide II n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IQC4_BORPD Length = 345 Score = 248 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 150/284 (52%), Positives = 203/284 (71%), Gaps = 2/284 (0%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 + + G +LL GC +L PKG IG ++++LILTA GLML++V+P I+M + F Sbjct: 48 FFATFGRTLGIGALMLLGGCTMEVLSPKGDIGAQEKTLILTALGLMLLIVVPVIIMTLYF 107 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 AWKYRASN A Y P WSHS ++E VVWT+P +I+ LAVLTW+++H L+P +P+ K Sbjct: 108 AWKYRASNTQAVYMPRWSHSTRIEVVVWTIPCIIVGILAVLTWRSSHELDPYRPIESAVK 167 Query: 126 PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 P+ I+VVSMDWKW FIYP+ GIATVNEIAFP + PV F++TS SVMNSFFIP+LGSQIY+ Sbjct: 168 PVNIDVVSMDWKWLFIYPDYGIATVNEIAFPVDAPVQFRITSASVMNSFFIPQLGSQIYS 227 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 MAGM+T+LHLIA EPGTY GISA+YSG GFSGM+F AIA + F+ W+ +AK + N + Sbjct: 228 MAGMETKLHLIAREPGTYAGISANYSGGGFSGMRFNAIA-TSQQGFEDWINQAKAANNPL 286 Query: 246 SDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 + AA++ LAAPS +S+ +F +++ M+ +D Sbjct: 287 T-PAAYQALAAPSINVAATRYSSTPTGMFDYIMHNQMSKIAGLD 329 >UniRef50_Q5FPP7 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Gluconobacter oxydans RepID=Q5FPP7_GLUOX Length = 312 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 135/312 (43%), Positives = 194/312 (62%), Gaps = 15/312 (4%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILM 61 ++K + L L ++LSGC LL P+G + R +++ F +M++VV+P Sbjct: 6 PMKKLWRYLPALP----ALMLSGCTVDLLQPRGPVAEMNRDVMVAEFVIMMLVVVPTCAA 61 Query: 62 AVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA 121 + FAWKYRASNK+A+Y P W HS +E V+W VP ++I L ++W +THA +P +PL Sbjct: 62 TLYFAWKYRASNKEAEYLPTWDHSTAIEYVIWGVPAILIALLGAISWWSTHAYDPYRPLQ 121 Query: 122 HDEK--PITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 + P+ ++VVS+DWKW FIYP+ GIAT+N++ P NTP+ F++TS+SVM SFFIPRL Sbjct: 122 TADNVKPLNVQVVSLDWKWMFIYPDLGIATINQLDVPTNTPLNFQITSDSVMTSFFIPRL 181 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 GS IYAM G QT+LHL+A+E G Y G ++ +SG GFS MKF+ +A D A F+ WV K K Sbjct: 182 GSMIYAMPGEQTQLHLLASESGDYLGEASQFSGRGFSDMKFRTLAM-DPAQFNDWVEKVK 240 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMA-------HGKSMDMTQ 292 + D + K AAP E V+YF++V+PDLF ++ K+ GK M M Sbjct: 241 SGSENLDD-TTYPKYAAPQEAAPVQYFAHVQPDLFDGIVAKYNNGMMVDKKTGKVMHMQS 299 Query: 293 PEGEHSAHEGME 304 + GM+ Sbjct: 300 ASNAAPSDTGMK 311 >UniRef50_B4SM49 Ubiquinol oxidase, subunit II n=4 Tax=Proteobacteria RepID=B4SM49_STRM5 Length = 301 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 147/277 (53%), Positives = 198/277 (71%), Gaps = 2/277 (0%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWK 68 + + + L+GC+ LLD KG +G+ QR LIL GLMLIVV+PAI++ FAW+ Sbjct: 7 RIRLALVALACIALTGCDWVLLDSKGMVGIAQRDLILICIGLMLIVVVPAIVLTFVFAWR 66 Query: 69 YRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 YRA N AKY P+WSHS KVE VVW VP++II LAV+ W +TH L+P KPL +P+ Sbjct: 67 YRAGNTKAKYMPDWSHSTKVEIVVWGVPLIIIAVLAVIVWTSTHELDPYKPLDVAGEPLH 126 Query: 129 IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 ++V++ DWKW F+YP+ GIATVN++ FPAN + F +TSNS MN+FFIP+LG QIYAMAG Sbjct: 127 VDVIATDWKWVFVYPDLGIATVNQLNFPANRALAFNITSNSTMNTFFIPQLGGQIYAMAG 186 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM 248 M+T+LHLIANEPG + G+S +YSG GFS MKF A A F++WVA+ + +P+ +S Sbjct: 187 MRTQLHLIANEPGQFRGMSGNYSGHGFSNMKFIATA-SSNEDFERWVAEVRSAPDALS-F 244 Query: 249 AAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 A F+ LAAPS V++FS+V+P LF VI++F+ G Sbjct: 245 AEFKALAAPSRNAPVQHFSSVEPLLFKKVIDQFIGVG 281 >UniRef50_A4G8I7 Ubiquinol oxidase subunit 2 (Ubiquinol oxidase polypeptide II) (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit 2) n=7 Tax=Proteobacteria RepID=A4G8I7_HERAR Length = 355 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 126/283 (44%), Positives = 179/283 (63%), Gaps = 11/283 (3%) Query: 25 CNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 C+ LL+P G I +Q LI+ + LML+V++P I++ + FAW+YR +N AKY P+W H Sbjct: 26 CDWVLLNPSGDIAAQQGQLIIVSVLLMLLVIVPVIILTLIFAWRYRKNNTSAKYEPDWDH 85 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA---------HDEKPITIEVVSMD 135 S K+E ++W P+LIII L ++TW +TH L+P +PL +P+TIEVV++D Sbjct: 86 STKLELIIWGGPLLIIIVLGLITWVSTHKLDPYRPLDRLDANRPISAAAEPLTIEVVALD 145 Query: 136 WKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 WKW FIYPEQGIATVNE+A P + PV FK+TS++VMNSF+IP L QIY MAGM+T+L+ Sbjct: 146 WKWLFIYPEQGIATVNELATPVDVPVRFKLTSSTVMNSFYIPELAGQIYTMAGMETQLNA 205 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLA 255 + N+P +G SA+YSG GFS M+FK D F++WV K K + D A+ +L Sbjct: 206 VINKPVESEGFSANYSGAGFSHMRFKYHGM-DVEDFNRWVKKVKAEGGKL-DRTAYLELE 263 Query: 256 APSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHS 298 PSE V Y+ V DL+ ++N+ + G + Sbjct: 264 KPSEREPVTYYKTVSSDLYGAILNRCVEEGSVCMDQMMRDDAH 306 >UniRef50_A9KG38 Cytochrome c oxidase polypeptide II n=7 Tax=Legionellales RepID=A9KG38_COXBN Length = 310 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 118/284 (41%), Positives = 170/284 (59%), Gaps = 7/284 (2%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGC----NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 L+ K L ++ + + L+GC +L P+G + E+R L + LMLIVVIP Sbjct: 13 LKNIIKFLLFVGVLVAGLSLAGCHSLRGGGILHPEGTVSFEERQLFFDSLALMLIVVIPV 72 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 +M+ F +YRA +K + Y PNW HS +E + W VP III L ++TW TH L+P + Sbjct: 73 FIMSFTFIVRYRAGHKTSDYKPNWGHSVLLETIWWGVPCGIIIILGIMTWTLTHKLDPYR 132 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSV-MNSFFIP 177 + KP+ I+ V++ WKW FIYPEQ ATVN + P + F +T++ V M++FFIP Sbjct: 133 RIDTPGKPLLIQAVALPWKWLFIYPEQNFATVNYLELPKGRQIEFWLTNDHVPMSAFFIP 192 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 LGSQIY MAGM+TRLHL+A + G Y G+ Y+G GFS M+F+ + W K Sbjct: 193 ELGSQIYTMAGMRTRLHLVALKDGNYWGLDTQYNGDGFSDMRFQVKVV-EPDELQHWFEK 251 Query: 238 AKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 AKQS ++ + ++KL PS + V YFS+V P+LF +I K+ Sbjct: 252 AKQSKEQLT-LQLYQKLIQPSAKDPVRYFSSVAPNLFPQIIMKY 294 >UniRef50_Q0FH64 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FH64_9RHOB Length = 377 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 123/278 (44%), Positives = 169/278 (60%), Gaps = 5/278 (1%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA-KYSPN 81 SGC +L P G +G +QR L++ + LMLIV++P + M+V F KYRA +D Y P Sbjct: 18 SGCQYDVLSPAGWVGDQQRDLLIISVLLMLIVILPVLFMSVYFPLKYRADREDTSDYDPE 77 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH--DEKPITIEVVSMDWKWF 139 + HSNK+EAVVW VPILII+ L T+ TH L+P +PL H P+ I+ VS+DWKW Sbjct: 78 FEHSNKLEAVVWGVPILIIVALGYYTYVYTHRLDPYRPLDHLEAGAPVEIQAVSLDWKWL 137 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 FIYPEQGIA+VNE+ PA P+ F ++S++VMN+ IP LG +Y+MAGM+T+LHLIA+E Sbjct: 138 FIYPEQGIASVNELVVPAGRPINFSLSSSTVMNTLSIPALGGMVYSMAGMETKLHLIADE 197 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 G Y G SA YSGPGF+GM F A FD WV + + + + L PS Sbjct: 198 EGVYPGRSAHYSGPGFAGMVFDTTA-TSDEEFDAWVEGIRAEAGPL-NRETYLALEEPSM 255 Query: 260 YNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEH 297 V ++ +V+ LF ++ + GK +H Sbjct: 256 NVPVSHYGSVEDGLFGRIVEMCVEDGKVCMGHMMMVDH 293 >UniRef50_B1YIW4 Cytochrome c oxidase subunit 2 n=2 Tax=Exiguobacterium RepID=B1YIW4_EXIS2 Length = 343 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 78/328 (23%), Positives = 133/328 (40%), Gaps = 24/328 (7%) Query: 1 MRLRKYNKSL-GWLSLFAGTVLLSGCN---SALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 M ++K K L L + +LLSGC + L P+G+ Q +I + +ML V+ Sbjct: 1 MVVKKSGKMLFRLLPIGLMALLLSGCGIPELSALQPRGEGAQMQLEIIKLSLWVMLFVLA 60 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP 116 ++ + K+R D ++ +E + +PIL+++ LAV T KTT L Sbjct: 61 IVAVIYIYVLMKFRRKAGDNTVPKQVEGNHTLEIIWTVIPILLLVVLAVPTIKTTVELAD 120 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 +K +E I V + + W F YP++G++T E+ P V +TS V++SF++ Sbjct: 121 AKEAKKNE---VINVTANLYWWEFEYPDKGVSTGQELVIPVGKRVAVNLTSKDVIHSFWV 177 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 P L + G+ + L A E GTY G A GP + M FK IA ++ +D W+ Sbjct: 178 PALSGKTDTNPGLDNEMWLQAQEAGTYYGKCAELCGPSHALMDFKVIAL-EQDDYDAWLK 236 Query: 237 KAKQSPNTMSDMAAFEK-----------LAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 K + + + + V P L + +A Sbjct: 237 DMKSAKEAETKQLDAKNKKNWTTGEQVYAQNCLSCHGG---GKVAPSLTNFGDRQRIAGY 293 Query: 286 KSMDMTQPEGEHSAHEGMEGMDMSHAES 313 +D + E + + Sbjct: 294 --LDHDKENLEKWIRNPQKEKQGTKMPG 319 >UniRef50_B6YZ13 Ubiquinol oxidase, subunit II n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YZ13_9RHOB Length = 282 Score = 243 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 124/279 (44%), Positives = 166/279 (59%), Gaps = 3/279 (1%) Query: 25 CNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 S + DPKG I + +R L+ TAF +MLIVVIP M F W+YRA +Y P+W Sbjct: 2 QTSPVADPKGPIAIIERDLLYTAFFIMLIVVIPVYFMVFWFIWRYRAKGGTGEYKPDWHK 61 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 S +E VW++P III L L W ++ L+P K +A E I ++VV+ DWKW FIYP+ Sbjct: 62 STIIEVFVWSIPAAIIITLGYLVWTYSYKLDPYKKIATPENTINVQVVAQDWKWLFIYPD 121 Query: 145 QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYD 204 GIA+VNE+AFP + V K+TS++VMNS IP LG QIYAMAGM + L+L ANE G + Sbjct: 122 LGIASVNELAFPVDKAVSMKLTSDTVMNSLLIPALGGQIYAMAGMTSELNLKANETGRFR 181 Query: 205 GISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVE 264 G + YSG GF+ F A+A F WVA AK +S +++LA PS + VE Sbjct: 182 GRNTQYSGDGFAMQFFDAVAM-TEEEFQDWVANAKAQSKPLS-TVTYDQLAQPSIAHGVE 239 Query: 265 YFSNVKPDLFADVINKFM-AHGKSMDMTQPEGEHSAHEG 302 YFS VKP LF +++ K+ ++ P A EG Sbjct: 240 YFSWVKPGLFEEILKKYARRPETTLRRHAPATTQPACEG 278 >UniRef50_C0Z582 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillales RepID=C0Z582_BREBN Length = 342 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 21/288 (7%) Query: 3 LRKYNKSLGWLSLFAG-TVLLSGCN---SALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++ + + SLFA ++L+GC + L P G + Q L+ + +M+ V I Sbjct: 1 MKGWQQYWRQFSLFALLALVLTGCGKDELSALKPSGPVAAMQFDLMKLSSAIMIGVFIVV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 + + +YR ++ +E + +P L++I +A+ T T AL Sbjct: 61 MAIFTYVLIRYRKRPGQQGIPKQVEGNHALEILWTVIPFLLLIIMAIPTVTTGFALHKEY 120 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 P + ++V + + W F YP+ G+A+ ++ P V F ++++ V ++F+IP Sbjct: 121 PKEE---AVQVKVTAHQFWWEFEYPDLGVASAQDLVLPVGKKVQFVLSASDVKHAFWIPA 177 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 LG +I G + ++ L A++ G Y G A G + M FK ++A FD WVA Sbjct: 178 LGGKIDTNPGQENKMWLQADKAGIYYGKCAELCGASHALMDFKVE-VKEQADFDTWVANM 236 Query: 239 K----QSPNTMSDMAAFEK-------LAAPSEYNQVEYFSNVKPDLFA 275 K + P T + A E + P+L Sbjct: 237 KGVQAKEPVTATSPLAAEGQQIFDKSCLGCHAVAGKG--GKMGPNLTN 282 >UniRef50_C4XNK3 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNK3_DESMR Length = 319 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 144/282 (51%), Positives = 189/282 (67%), Gaps = 4/282 (1%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCN-SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAI 59 M+ + L L A LSGC+ ALLDPKG IG +R LI AFGLMLIVVIP I Sbjct: 1 MKRNTASAFAAVLGLCALAA-LSGCSELALLDPKGPIGEAERRLIFIAFGLMLIVVIPVI 59 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 +MAV F KYR SN +A+Y+P WSHS K+E V+W +P++I+I L+ L W TH L+P KP Sbjct: 60 VMAVWFPHKYRESNTEAEYAPKWSHSGKIELVMWLIPMVIVILLSTLLWIETHRLDPYKP 119 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 LA +K + +EVVS+DWKW FIYP QG+A VNE+ FPA P+ F +TS++VM SFFIPRL Sbjct: 120 LAAPDKQLPVEVVSLDWKWLFIYPRQGVAVVNELVFPAGMPLAFDITSDTVMTSFFIPRL 179 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 GSQIYAM GM+T+LHL+A+ G Y G + +SG G+ M F A A +A FD W+ K K Sbjct: 180 GSQIYAMGGMRTKLHLLADTEGEYVGQNQQFSGAGYPDMFFPARAV-SQAGFDAWLQKVK 238 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 SP T+ +M F++L P YFS ++P +F ++ K+ Sbjct: 239 ASPETL-NMTRFDELRKPGVAAAPVYFSKIEPGIFEAILGKY 279 >UniRef50_C6CSR8 Quinol oxidase AA3, subunit II n=2 Tax=Paenibacillaceae RepID=C6CSR8_PAESJ Length = 317 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 122/316 (38%), Positives = 183/316 (57%), Gaps = 15/316 (4%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +RKY + L L + V+LSGC+ +LDPKG IG Q+ LI L I+++P ++ Sbjct: 1 MRKYIRFLVPLMIMLIAVMLSGCSDQYVVLDPKGPIGESQKDLIWITVWLCAIILVPVLI 60 Query: 61 MAVGFAWKYRASN-KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 + W+YR A Y PNW HS K+E + W +PI+II LA +T K T+ LEPSKP Sbjct: 61 LTAIIVWRYRDKKDNKAGYQPNWEHSTKLETIWWAIPIIIIAILATVTIKYTYDLEPSKP 120 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 L ++PITIE S+DWKW F YP++GI+TVN + P +TP+ F+VT++ MNSF+IP+L Sbjct: 121 LESAKQPITIEATSLDWKWLFTYPDEGISTVNYLQIPEDTPIRFRVTADQAMNSFWIPQL 180 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G QIYAM+GM L+L A+E G + G+ A+++G F+ M F A A + WV K Sbjct: 181 GGQIYAMSGMAMTLYLQADEVGDFLGMGANFTGEQFAKMMFNVKA-TSDADYHAWVDSVK 239 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSA 299 Q+ +++ F++L P ++ + FS LF V+ +++ P G + Sbjct: 240 QTSPALTEEG-FKELKLPGS-SEQQSFSAFPKGLFDQVVMQYVG---------PNGADAP 288 Query: 300 HEGMEGMDMSHAESAH 315 + G + + AE H Sbjct: 289 NSGQKSKPIHDAEGGH 304 >UniRef50_B0VM15 Cytochrome o ubiquinol oxidase subunit II n=14 Tax=Acinetobacter RepID=B0VM15_ACIBS Length = 350 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 142/326 (43%), Positives = 190/326 (58%), Gaps = 46/326 (14%) Query: 24 GCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 GC LL+ KG +G Q L++TA LML+VVIP+I+MA+ F WKYRASNKDA Y P Sbjct: 20 GCGGDMVLLNSKGPVGQGQSDLMMTAIYLMLLVVIPSIIMALWFGWKYRASNKDADYKPT 79 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI 141 W+HS +E VVW +P++II LA LTW +H +P +PL D+ P+TI+V++ +KW FI Sbjct: 80 WAHSTAIEVVVWGIPVIIIGILAWLTWWGSHKYDPYRPLESDKAPLTIQVIAEQFKWIFI 139 Query: 142 YPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 YPEQ IATVNE+ FP TP+ FK+TSN MNSFFIP+LG QIYAMAGMQT LHL+ANE G Sbjct: 140 YPEQNIATVNEVRFPEKTPLSFKITSNFTMNSFFIPQLGGQIYAMAGMQTHLHLLANETG 199 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA----- 256 Y G S++YSG GFS M+FKA + ++ F++WVA K T + A +K Sbjct: 200 VYRGFSSNYSGYGFSQMRFKAHSVTEQ-QFNEWVAAVKAGNGTTINPEAVQKTTLDQAEL 258 Query: 257 --------------------------------------PSEYNQVEYFSNVKPDLFADVI 278 P++ + V Y+S+V+P LF +I Sbjct: 259 ATLRDGDRSKHQIEHLVNRAKAAGDQEALAKAEAMKPFPTKPHPVTYYSSVEPKLFETII 318 Query: 279 NKFMAHGKSMDMTQPEGEHSAHEGME 304 N +M++ D + H E Sbjct: 319 NHYMSNYHGADHSAAHTTAETHVAAE 344 >UniRef50_Q89AA3 Ubiquinol oxidase subunit 2 n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=CYOA_BUCBP Length = 286 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 131/278 (47%), Positives = 186/278 (66%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M+ KY + L + ++GC+ +L P G I EQR ++ +F ML+++IP I Sbjct: 1 MQFIKYKSYILKFLLVSCIFCINGCDCTILCPNGLIAQEQRFVLFVSFFTMLLIIIPVIF 60 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 M + F +YR SN Y P WSHSN +E ++W +PI+II+FL++ +WK+ H L+P KP+ Sbjct: 61 MTIFFVLRYRESNFSKTYDPKWSHSNIIELLIWGIPIIIIVFLSIFSWKSVHDLDPKKPI 120 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 + +PI I V+S+DWKW FIYP+Q IAT+N++ P NTP+ F +TS SVMNSFFIP LG Sbjct: 121 VSNVQPIKINVISLDWKWLFIYPDQKIATINKLIIPINTPIIFNLTSGSVMNSFFIPSLG 180 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 SQIY M GM+T L+LIAN+ G + G S++YSG GFS MKF + T D F +WV K ++ Sbjct: 181 SQIYVMPGMKTNLNLIANKLGQFKGFSSNYSGKGFSNMKFDVLVTSDHIFFYEWVKKIQK 240 Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVI 278 S ++ M F +LA PS+ N ++YFSN+K +LF VI Sbjct: 241 SKYKLNSMYQFNQLAIPSDNNAIKYFSNLKENLFNVVI 278 >UniRef50_B9KZ00 Cytochrome c oxidase subunit 2 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZ00_THERP Length = 388 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 64/305 (20%), Positives = 116/305 (38%), Gaps = 28/305 (9%) Query: 23 SGCN------SALLDPKGQIGLEQRSLILT-AFGLMLIVVIPAILMAVGFAWKYRASNKD 75 SGC ++ DP G L +T + L++ V + + ++R D Sbjct: 50 SGCGVIGGKIASTSDPAGDQARLIWDLFITPVWWLVIFVFVLVTGWILINIVRFRRQPGD 109 Query: 76 AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMD 135 + P + ++E +P +I+ +AV + + E ++ + +V+ Sbjct: 110 TRIPPQVHGNQRLEIAWTLIPAIILALIAVPSTRLIF--ELNRDPGPGSNALRAQVIGHQ 167 Query: 136 WKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 W W F YPE GI T ++ PV +TS+ V++SF+ PRL ++ A+ G + Sbjct: 168 WWWEFRYPEYGIVTAGDLHLVVGRPVVLTITSHDVIHSFWPPRLAGKVDAVPGRAHTMVF 227 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM------- 248 E G + G A G + M+F+ + FD WVAK ++ Sbjct: 228 TPEETGVFYGQCAELCGAQHAHMQFRV-VVQTQEEFDAWVAKLRRPIPEPPAGSLAATGQ 286 Query: 249 ---AAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEG 305 A A + + + V P INK +A G ++ +A Sbjct: 287 QLFAGKAGCAGCHQVSPT--YDPVTP------INKTLAVGPNLAYIGERHVLAAFTDNTP 338 Query: 306 MDMSH 310 ++ Sbjct: 339 EELHR 343 >UniRef50_Q2C912 Cytochrome o ubiquinol oxidase, subunit II n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C912_9GAMM Length = 279 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 156/278 (56%), Positives = 201/278 (72%) Query: 15 LFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNK 74 + T++L+GC ALLDPKG IG++++ LI+ A LMLIVVIP ILM + FA++YR SN Sbjct: 1 MVLTTLILNGCQFALLDPKGSIGVQEKELIIKALLLMLIVVIPVILMTIYFAYRYRESNT 60 Query: 75 DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 D +Y+P+WSHS K+E VVWT+PI+II LA +TW++TH LEPSKP+A D KPITIEVVS+ Sbjct: 61 DEEYAPDWSHSTKIEVVVWTIPIIIIAILATITWRSTHELEPSKPIASDAKPITIEVVSL 120 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 DWKW FIYPEQ IATVN + FP N PV FK+TS+++MN+FFIP+LGSQIYAM GM T+L+ Sbjct: 121 DWKWLFIYPEQDIATVNYVVFPKNVPVQFKLTSDNIMNAFFIPQLGSQIYAMPGMVTKLN 180 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKL 254 LIAN G + G +SYSG GFS MKF A + +R AF WV + K SPN + D F + Sbjct: 181 LIANHRGDFKGFGSSYSGKGFSEMKFTATSLENRHAFSSWVQQVKMSPNRIEDWEQFRAI 240 Query: 255 AAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ 292 A+PS + E FS+V P LF DV+ + + T Sbjct: 241 ASPSVGDPAESFSSVPPFLFNDVVTQHPGSMNCLPETL 278 >UniRef50_Q04441 Cytochrome c oxidase subunit 2 n=5 Tax=Bacillus RepID=COX2_BACPF Length = 342 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 14/278 (5%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGC----NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++ + + +L L T+ L+GC N LDPKG ++ + +M +V I Sbjct: 1 MKLWKTASRFLPLSFLTLFLTGCLGEENLTALDPKGPQAQWIYDNMILSIIVMALVSIVV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL-EPS 117 + KYR D + + +E +PI++++ LAV T T + Sbjct: 61 FAIFFIILAKYRRKPGDDEIPKQVHGNTALEITWTVIPIILLVILAVPTITGTFMFADKD 120 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 + + I+V + W F Y +G ++ P V F++ + V++SF++P Sbjct: 121 PDPEVGDNTVYIKVTGHQFWWQFDYENEGFTAGQDVYIPVGEKVIFELHAQDVLHSFWVP 180 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 LG +I + G+ + L A+EPG + G A GP + M FK IA +R +D WV Sbjct: 181 ALGGKIDTVPGITNHMWLEADEPGVFKGKCAELCGPSHALMDFKLIAL-ERDEYDAWVEG 239 Query: 238 AKQSPNTMSDMAA--------FEKLAAPSEYNQVEYFS 267 ++ A + Sbjct: 240 MSAEVEEPTETLANQGRQVFEENSCIGCHAVGGTGTAA 277 >UniRef50_A1UU71 Cytochrome o ubiquinol oxidase, subunit II n=5 Tax=Bartonella RepID=A1UU71_BARBK Length = 323 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 115/308 (37%), Positives = 176/308 (57%), Gaps = 13/308 (4%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 +R + K + L++ +LLSGC +L P G + +Q LI +ML VVIP ++ Sbjct: 1 MRSFVKQIEMLTILGVGLLLSGCKIDVLQPAGYVARQQLILIAICVFVMLCVVIPVMVAV 60 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP--- 119 + A KYRASN A Y P+W HSNKVEA +W VPI II+ L LT T+ LEPS P Sbjct: 61 IVLAIKYRASNTKADYLPDWGHSNKVEAFMWGVPIAIIVILGALTAYYTYRLEPSNPLPV 120 Query: 120 -LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 +A +EK + + V++DWKW FIYPE GIA++NEI P + V ++TS S +N+F++P+ Sbjct: 121 EVAGEEKLLQVNAVALDWKWLFIYPEYGIASINEIYAPKDRQVLLQLTSESSLNAFWVPK 180 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 LG+ +YAM M ++LHL+A+E G ++G SA+YSG GFS M+F + F+ WV K Sbjct: 181 LGTVLYAMPQMNSKLHLVADEKGIFNGNSANYSGDGFSHMRFHWHSV-SLEDFNDWVTKV 239 Query: 239 KQSPNTMSD--------MAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDM 290 + + + +AA + +V YF+ V+ L+ ++N+ + + Sbjct: 240 RDNGQKLDRVSYRQLAIAPRMNDIAAKEKDAEVRYFAPVEKRLYYRIVNRCVDENTICNE 299 Query: 291 TQPEGEHS 298 + + Sbjct: 300 DLMKRAAA 307 >UniRef50_D0ST29 Ubiquinol oxidase, subunit II n=2 Tax=Acinetobacter RepID=D0ST29_ACILW Length = 364 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 139/340 (40%), Positives = 194/340 (57%), Gaps = 46/340 (13%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAV 63 L LSL A T LL+GC LL+ KG + Q +L++TA LML+VVIP+I+MA+ Sbjct: 2 RQTILAVLSLSAMTALLTGCGGDMVLLNSKGPVAAGQSNLMMTAIYLMLLVVIPSIIMAL 61 Query: 64 GFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD 123 F WKYRASNKDA Y P W+HS +E VVW +P++II LA LTW +H +P +P+ D Sbjct: 62 WFGWKYRASNKDADYKPTWAHSTAIEIVVWGIPVIIIGILAWLTWWGSHKYDPYRPIEAD 121 Query: 124 EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQI 183 + P+T++V++ +KW FIYPEQGIATVNE+ FP TPV ++TSN MNSFFIP L QI Sbjct: 122 KAPLTVQVIAEQFKWIFIYPEQGIATVNELRFPEQTPVSLRLTSNFTMNSFFIPALSGQI 181 Query: 184 YAMAGMQTRLHLIANEPGT---YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 YAMAGMQT L+ +A+E Y G S++YSG GFS M+F+A + D A F +W++ + Sbjct: 182 YAMAGMQTHLNFLADETSPAEGYRGFSSNYSGYGFSQMRFRAHSVTD-AQFAEWISAVQA 240 Query: 241 SPNTMSDMAAFEKLA----------------------------------------APSEY 260 T + A +K P++ Sbjct: 241 GNGTSVNPNAVQKTVLDQAEFATLRDGNRGKHQIEAIIAKAETPEEKAAAEAMKPYPTKP 300 Query: 261 NQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300 + V Y+S+V+ LF VI+K+M++ D + P + Sbjct: 301 HPVTYYSSVEQGLFESVIHKYMSNYHGADHSAPVEAAATD 340 >UniRef50_C6IYW1 Cytochrome c oxidase subunit 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYW1_9BACL Length = 352 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 14/291 (4%) Query: 3 LRKYNKSLGWLSLFAG-TVLLSGC---NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++ + + LFA +LLS C + ++L P+G + Q LI + +M++V++ Sbjct: 2 MKPWKAVKRLVPLFAMLALLLSACGREDLSVLRPQGPVAEGQLGLIKLSITIMIVVMLIV 61 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 +A KYR ++K+E + +P+++++ LAV T + A Sbjct: 62 FGIAAYVWIKYRRKPGQNDIPKQVEGNHKLEIIWTAIPLVLVLILAVATVQKVFAFGE-- 119 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 + D + I+V S + W F YP+ GI T ++ P + ++ + V++SF++P Sbjct: 120 DYSKDANAVKIKVTSHLFWWEFTYPDYGITTAQDMIIPTGKKIALELKTADVLHSFWVPS 179 Query: 179 LGSQIYAM-AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 L + G + L A G Y G A G + M+FK A +FD+WV Sbjct: 180 LAGKTDTNTDGTINKAWLEATNEGVYLGKCAELCGKSHAFMEFKVKAV-SPESFDRWVEA 238 Query: 238 AKQSPNTMSDMAAFE----KLAAPSEYNQVEYFSNVKPDLFADVINKFMAH 284 K T+ D A E + + V P+L + +A Sbjct: 239 MKAPVQTIQDPAVAEVFKTQCLSCHAIGDQG--GPVGPNLTGIGSRETVAS 287 >UniRef50_D0D3A4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella sp. SE45 RepID=D0D3A4_9RHOB Length = 413 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 123/287 (42%), Positives = 180/287 (62%), Gaps = 5/287 (1%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA-SNKDAKYSPN 81 +GC +L P+G +G +QR L++ + LMLIV++P + M+V F KYRA + Y P Sbjct: 44 TGCQYNVLSPQGWVGEQQRDLLILSTLLMLIVIVPVLFMSVYFPLKYRADRENTSDYDPE 103 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA--HDEKPITIEVVSMDWKWF 139 + HSNK+EAVVW VPILII+ L T TH L+P +PL +PI ++ VS+DWKW Sbjct: 104 FEHSNKLEAVVWGVPILIIVVLGYYTAVYTHRLDPYRPLDYLDAGEPIEVQAVSLDWKWL 163 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 FIYPE G+A+VNE+A PA PV F +TS++VMN+ IP LG +Y+MAGM+T+LHLIA+ Sbjct: 164 FIYPELGVASVNELAIPAGRPVNFSLTSSTVMNTLSIPALGGMVYSMAGMETKLHLIADS 223 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 GTY+G SA YSGPGF+GM F+ ++ + F+ WV + ++ ++ L AP+ Sbjct: 224 EGTYEGRSAHYSGPGFAGMVFETMSM-NEDEFNGWVENLRAEGQPLTAD-SYLALEAPTM 281 Query: 260 YNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGM 306 + V Y+S+V+ LF ++ +A GK + G+ G+ Sbjct: 282 NDPVSYYSSVEDGLFDRIVGLCVAEGKVCMSDMMMSDMHGGGGLAGI 328 >UniRef50_D1C449 Cytochrome c oxidase subunit 2 n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C449_SPHTD Length = 345 Score = 233 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 116/300 (38%), Gaps = 21/300 (7%) Query: 3 LRKYNKSLGWLSL-FAGTVLLSGCNSALL----DPKGQIGLEQRSLILTAFGLMLIVVIP 57 LR+ + + +L A V +SGC DP + L + F + ++V + Sbjct: 4 LRRTARWALFAALTVALVVFVSGCAGGTPQSASDPAADNARKIWDLFMPIFWMSVVVFVI 63 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLA-VLTWKTTHALEP 116 + + ++R D P+ H N + WT+ +I+ V T T Sbjct: 64 VQGIIIVALIRFRRRPND--PIPHAMHGNTKLEIAWTLAPALILAAIAVPTITTI----A 117 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 ++ +T+ + W W F YPE G+ T +E+ P P+ ++ S +++SF++ Sbjct: 118 DLARDPGDEALTVRAIGQQWWWAFEYPESGVVTADELHVPVGRPIRVELESKDIIHSFWV 177 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 PRL + + G +H A+ G Y G A + G + MKFK I F+ W+ Sbjct: 178 PRLAGKQDVVPGRTNTIHFTADAVGEYSGQCAEFCGAQHANMKFKVI-VQTEEEFEAWLE 236 Query: 237 KAKQS---PNTMSDMAAFEK-----LAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM 288 + Q P S A ++ E V PDL +A G Sbjct: 237 QQLQPAVEPEPGSVEAQGKELFMANCLGCHTIQGTEAQGKVGPDLTHFGSRNMIAGGVVP 296 >UniRef50_A0NWL4 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWL4_9RHOB Length = 310 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 124/284 (43%), Positives = 177/284 (62%), Gaps = 6/284 (2%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 R+R +S L +L GC + +L PKG I L +R L+ TAFG+M+IV IPA Sbjct: 9 RVRAALRSAATAGLICSVPVLQGCALSDAPVLFPKGPIALAERDLLFTAFGIMMIVAIPA 68 Query: 59 ILMAVGFAWKYRAS-NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 IL+ + FAW+YR A Y+P W S +EAVVW VP I++ + + W TH L+P Sbjct: 69 ILLTLLFAWRYRKRTRNTADYAPEWDGSWGIEAVVWLVPAAIVVVIGTIVWDATHRLDPY 128 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 KPLA D+ ++ V++DWKW F+YPE G A+VNE+AFPA+ P+ ++TS++VMNS IP Sbjct: 129 KPLAADKPAFKVQAVALDWKWLFLYPELGTASVNELAFPADRPLTIEITSDTVMNSLMIP 188 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 LG QIYAMAGM++ ++LIA+ PGT++G + YSG GFS FKA A A F W K Sbjct: 189 ALGGQIYAMAGMRSEMNLIADGPGTFNGRNTMYSGDGFSDQHFKAHAM-SEADFAAWKEK 247 Query: 238 AKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 + + + D A+ L S + V Y+S+ + DLF+ ++ K+ Sbjct: 248 VTGAADVL-DAKAYVDLHKQSVADPVRYYSSFETDLFSIILRKY 290 >UniRef50_Q8L312 Cytochrome bo subunit A n=1 Tax=Vitreoscilla sp. C1 RepID=Q8L312_VITS1 Length = 325 Score = 231 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 133/293 (45%), Positives = 191/293 (65%), Gaps = 20/293 (6%) Query: 13 LSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 LS LL+GC L+D KGQ+G+EQR+LI +ML+VVIPAI M++ FAWKYR Sbjct: 8 LSFITLAALLAGCGEGYVLIDSKGQVGIEQRNLIYIQIVMMLLVVIPAIAMSLWFAWKYR 67 Query: 71 ASNK--DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 +NK + +Y+PNW +S+K+E VW VP +II+ +AV++W+ TH L+P +PL D++ I Sbjct: 68 HNNKAVEKEYAPNWDYSHKIEMWVWAVPCIIILIMAVISWRATHKLDPYRPLDSDKEHIQ 127 Query: 129 IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 I+ ++ ++W F+YP + IATVNEI FP N PV F +TS+ MNSFFIP+LG Q+YAMAG Sbjct: 128 IQAIAAPYQWVFVYPNENIATVNEIYFPDNQPVNFVITSDFSMNSFFIPQLGGQVYAMAG 187 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS-- 246 M+T+LHLIANE G Y+G SA+YSG GFS MKFKA A A ++ W+ + K S NT++ Sbjct: 188 MKTQLHLIANEQGVYEGTSANYSGHGFSKMKFKAHAV-SGAEYENWIKQVKASQNTLTMQ 246 Query: 247 ------DMAAFEKLAAPSEYN-------QVEYFSNVKPDLFADVINKFMAHGK 286 + + P V+YF V+ +LF ++++++M Sbjct: 247 KFKSLQEPVRQTTVGVPHVKRTESPKPEPVQYFGTVENNLFQNIVDQYMRSKH 299 >UniRef50_C1PAT6 Quinol oxidase AA3, subunit II n=1 Tax=Bacillus coagulans 36D1 RepID=C1PAT6_BACCO Length = 308 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 103/292 (35%), Positives = 149/292 (51%), Gaps = 14/292 (4%) Query: 24 GCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 GC++ A+LDP+G + EQ LI+ + LM V + + + + KYRAS A Y P Sbjct: 23 GCDTKIAVLDPQGPMAREQYHLIVYSSILMAFVFVVVLGLYLYMVIKYRASRLPADYKPP 82 Query: 82 WSHSNK-VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 H +K +E V +P+L+II +A+ T K +++E + +EKP+T+ V S +WKW F Sbjct: 83 QIHGHKVLETVWTAIPVLLIIAIAIPTVKANYSVEETPKSMKNEKPLTVYVTSSEWKWIF 142 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPEQGI TVN + PA P+ F++TS+ M SF+IP LG Q Y M M RL L A+ P Sbjct: 143 SYPEQGIETVNYVNIPAGRPINFELTSSGTMASFWIPELGGQKYTMPNMTMRLILAADHP 202 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G Y G +A+++G GF+ M F +A F+ WV + K M + + Sbjct: 203 GEYTGRNANFNGEGFAKMDFDVLA-QTPKDFNAWVKEVKSRAPQMKKSDYEKLIKKEGLV 261 Query: 261 NQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGE---HSAHEGMEGMDMS 309 + Y + KS +GE H H M GMDMS Sbjct: 262 GRQTYTGT-------HLKWDKPDEQKSYYEESEKGEKQNHHHHHDMSGMDMS 306 >UniRef50_B9R6J2 Ubiquinol oxidase, subunit II n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R6J2_9RHOB Length = 326 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 127/280 (45%), Positives = 180/280 (64%), Gaps = 8/280 (2%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 + + LG + A L+SGC + +L P+G I L QR L+ TAF LM+IV IPAIL+ Sbjct: 31 WVRQLG--AAAAIAFLVSGCALSEAPILYPQGPIALAQRDLLFTAFWLMMIVAIPAILLT 88 Query: 63 VGFAWKYRASNKD-AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA 121 + F ++YR+ + A Y+P W S K+E VVW VP III L L W+ TH L+P K LA Sbjct: 89 LLFVYRYRSRHHSTAAYTPEWEGSWKIETVVWLVPAAIIIVLGTLVWRDTHKLDPYKELA 148 Query: 122 HDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGS 181 D+ P ++ +++DWKW F+YPE G+A+VNE+AFPA+ P+ K+TS++VMNS IP LG Sbjct: 149 SDKPPFEVQAIALDWKWLFVYPELGVASVNELAFPADRPLSIKITSDTVMNSLMIPALGG 208 Query: 182 QIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 QIYAMAGM+T ++L+A+ PGT+ G + YSG GFS F A A A F W K S Sbjct: 209 QIYAMAGMRTEMNLLADGPGTFKGRNTMYSGDGFSDQNFLAHAL-TEADFTAWKEKVTGS 267 Query: 242 PNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF 281 P+ + D + ++ S N V Y+S+V+P+LF ++ K+ Sbjct: 268 PDAL-DAKTYLEVTKQSVANPVAYYSSVEPNLFGLILRKY 306 >UniRef50_A7NPW1 Cytochrome c oxidase subunit 2 n=2 Tax=Roseiflexus RepID=A7NPW1_ROSCS Length = 370 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 116/296 (39%), Gaps = 32/296 (10%) Query: 16 FAGTVLLSGCN---SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 V+ + C DP G L++ + + L V + + V W++R Sbjct: 18 IGLAVVPAACGNTPGNTYDPYGDNARRIYELLIPIWWMALGVFVVVEGLLVYAIWRFRRR 77 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVV 132 A + +VE + P +I++ +AVLT++T + E + I+ + Sbjct: 78 PGSAAMPSQVHGNTQVEILWTIAPAIIVLVIAVLTFRT-----QAANAIMPEDALRIKAI 132 Query: 133 SMDWKWFFIYPEQG-----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 W + F YP+ G + T +++ P PV + S V+++F++P+L + Y + Sbjct: 133 GHQWWFEFQYPDAGADGKPVVTASDMYIPVGRPVTVVLESQDVIHNFWVPKLAGKTYMIP 192 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD 247 G L A +PG Y + A + G + M+F+ IA D + F++W+ + K P+ + Sbjct: 193 GKTNFLTFTAEQPGIYRAVCAEFCGEAHALMRFRVIAV-DESEFNRWIEQKKTPPSAPAG 251 Query: 248 MAAFE------------------KLAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 + A + P+L + +A G Sbjct: 252 TLTVNGLTGDATRGQAIFLDARKQCIACHAVEGTNARGQIGPNLTYYGSRQTIAAG 307 >UniRef50_Q5SLI2 Cytochrome c oxidase subunit 2 n=4 Tax=Thermus RepID=Q5SLI2_THET8 Length = 337 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 10/271 (3%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 +S L L+ ++ A+ P G E L + ++ + Sbjct: 2 QRSFAALGLWGLSLAQEAHRVAITHPGGSFNQEVAFLFPWVYFFSFLIFLVVAGSLAYVT 61 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP 126 WK+RA +D + P ++++E V +P+ I+ L LT K + P Sbjct: 62 WKFRARPEDQEEPPQIHGNDRLEVVWTLIPLAIVFVLFGLTAKALIQVNRPIP-----GA 116 Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + +EV + W F YPE G+ NE+ PA PV ++TS V++SF++P L + A+ Sbjct: 117 MKVEVTGYQFWWDFHYPELGLRNSNELVLPAGVPVELEITSKDVIHSFWVPGLAGKRDAI 176 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 G TR+ EPG Y G A G + M F+ + P + FD++V AK SP ++ Sbjct: 177 PGQTTRISFEPKEPGLYYGFCAELCGASHARMLFRVVVLP-KEEFDRFVEAAKASPAPVA 235 Query: 247 D----MAAFEKLAAPSEYNQVEYFSNVKPDL 273 D + AA + + + P+L Sbjct: 236 DERGQQVFQQNCAACHGVARSMPPAVIGPEL 266 >UniRef50_Q8ER77 Cytochrome c oxidase subunit 2 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ER77_OCEIH Length = 350 Score = 226 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 21/296 (7%) Query: 3 LRKY-NKSLGWLSLFAGTVLLSGC---NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++ + KS + + A +L++GC N LDPKG LIL +M+ V I Sbjct: 1 MKGWMGKSKVFFLISAMALLMAGCGRENLTALDPKGYGADRAMDLILLTTFIMIGVFIIV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNK-VEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 + + V ++R Y P N +E + +PI++++ +AV T T Sbjct: 61 MAIYVITLVRFRKKKGQEDYIPEQVEGNHKLEVIWTVIPIILVLVIAVPTVLGTF---DL 117 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 ++ ++ + IEV + W F Y + + T ++ P VY + S+ V +SF+IP Sbjct: 118 ADDSNADEHVNIEVTGNQYWWHFNYAGEEVVTSQDLYIPTGERVYLNMLSSDVTHSFWIP 177 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 + ++ +++ A+E G Y G A GP S M FK IA ++QWVA Sbjct: 178 SISGKMDVNPENVNTMYIEAHEEGVYWGKCAELCGPSHSLMDFKVIAV-SPEEYEQWVAD 236 Query: 238 AK----------QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMA 283 + ++ + P+L +A Sbjct: 237 MQSVDPEEVPEDSVAQEGQELFEANNCMNCHAIGSSPA--AIGPNLTNFGDRSTIA 290 >UniRef50_P34957 Quinol oxidase subunit 2 n=10 Tax=Bacillales RepID=QOX2_BACSU Length = 321 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 14/290 (4%) Query: 24 GC-NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA--KYSP 80 GC N+++LDPKG + +Q LIL + G ML +V ++ KYR Y+P Sbjct: 25 GCSNASVLDPKGPVAEQQSDLILLSIGFMLFIVGVVFVLFTIILVKYRDRKGKDNGSYNP 84 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 + +E V +PILI+I L+V T +T ++LE + D++P+ + S+DWKW F Sbjct: 85 EIHGNTFLEVVWTVIPILIVIALSVPTVQTIYSLEKAPEATKDKEPLVVYATSVDWKWVF 144 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPEQ I TVN + P + P+ FK++S M S +IP+LG Q YAMAGM +L A++ Sbjct: 145 SYPEQDIETVNYLNIPVDRPILFKISSADSMASLWIPQLGGQKYAMAGMLMDQYLQADKV 204 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 GTY+G +A+++G F+ +F A F+ WV K + ++ +++L P Sbjct: 205 GTYEGRNANFTGEHFADQEFDVNAV-TEKDFNSWVKKTQNEAPKLTKEK-YDELMLPENV 262 Query: 261 NQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSH 310 +++ F+ K++ HG+ + + ++ + + Sbjct: 263 DELT---------FSSTHLKYVDHGQDAEYAMEARKRLGYQAVSPHSKTD 303 >UniRef50_C0Z7C6 Quinol oxidase polypeptide II n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7C6_BREBN Length = 331 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 117/313 (37%), Positives = 184/313 (58%), Gaps = 15/313 (4%) Query: 12 WLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 W+ GTVLL+GC S +L+PKG + Q +LI+ + L+ ++++P I + ++Y Sbjct: 13 WILAVLGTVLLTGCGSEYLVLNPKGPVAETQYNLIIISTILVAVIIVPVIALTAFIVYRY 72 Query: 70 RASNKD-AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPIT 128 R + + A Y P W+HS +E + W +PI+I+ L T + + L+ + P+T Sbjct: 73 RDTPGNKASYKPEWAHSTTLEVIWWIIPIVIVALLGYFTVRDVYVLKENPNKEVA--PMT 130 Query: 129 IEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 I+V ++DWKW F YPEQ IATVN + PA P+ F+V++++ MNSF++P LG QIYAMAG Sbjct: 131 IQVTALDWKWMFTYPEQNIATVNHLEIPAGVPIRFQVSADAPMNSFWVPELGGQIYAMAG 190 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM 248 M T L+L A+EPGT+ G S+++SG GF+ M+F +A P + FD+WV + K + M+ Sbjct: 191 MATELYLQADEPGTFAGFSSNFSGEGFAKMQFDVVAKP-KDEFDKWVKEVKGTTPAMTK- 248 Query: 249 AAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ-----PEGEHSAHEGM 303 A +E+L P ++ Y S +F +++ K+ HG MD P G+ S+ E Sbjct: 249 ADYEELRKPGVTDKFTY-SAFPEGMFEEIVAKY-GHGHDMDYVMEKNPAPAGDKSSSETS 306 Query: 304 EGM-DMSHAESAH 315 M M H +H Sbjct: 307 LNMQHMQHKTESH 319 >UniRef50_A4A2K3 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2K3_9PLAN Length = 337 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 20/297 (6%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 + ++ +L ++L ++L + DP +E R L + ++ + Sbjct: 1 MMRWPLALALVAL--SPLVLVAQTPEMFDPASPDAIEIRELFYLVLAITTLIFVLVGGAL 58 Query: 63 VGFAWKYRASNK---DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 F +++R D P S +E P LI++ L+++ ++ A+ P Sbjct: 59 AYFIYRFRDPPGAPRDDSEPPQIYGSQPIEIAWTLAPTLIVLVLSLVVIRSVIAMRSEPP 118 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPAN-----TPVYFKVTSNSVMNSF 174 + + V W W F YPE G T NE+ P + TPVY ++ S V++SF Sbjct: 119 TEG---TLRVRAVGHQWWWEFEYPEFGFTTANELVIPTSDADAPTPVYLQLESADVIHSF 175 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 ++P+L + + R+ L AN G Y+G A Y G + M + A A F++W Sbjct: 176 WVPKLAGKTDLVPAKTNRMRLEANAAGIYEGRCAEYCGTQHAKMLIRVTAV-SPAEFEKW 234 Query: 235 VAKAKQSPNTMSDMAAFEK------LAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 VA ++S + + A + A PDL + +A G Sbjct: 235 VADQQRSAAVAASVDAGRQIFMDQACANCHTIRGEPAIGKFGPDLTHLMSRHTIASG 291 >UniRef50_Q725F6 Quinol oxidase AA3, subunit II n=17 Tax=Listeria RepID=Q725F6_LISMF Length = 368 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 88/253 (34%), Positives = 137/253 (54%), Gaps = 3/253 (1%) Query: 17 AGTVLLSGC-NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 T L+SGC + +L+PKG + Q LI+ + ML++V+ ++ KYR Sbjct: 15 GVTGLISGCGDLTVLNPKGPVAKGQSDLIIYSIIFMLVIVLTIFVLFTIMLVKYRERKDI 74 Query: 76 AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMD 135 + Y P+ S K+E +P+ I+I LA+ T KT +A E + + + PI I S D Sbjct: 75 SNYEPDMHGSKKLEIFWTLIPVAIVIALAIPTVKTIYAGEEAPKVTSHKDPIVIYATSAD 134 Query: 136 WKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 WKW F YP++ I TVN + P + PV FK+TS M SF++P+LG Q YAM+GM L+L Sbjct: 135 WKWIFSYPDESIETVNYVNIPTDRPVLFKLTSADTMTSFWVPQLGGQKYAMSGMTMNLYL 194 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLA 255 A+E GTY G +A+++G GF+ +F +A F +W + K S ++ +++L Sbjct: 195 QADEVGTYKGRNANFNGEGFADQRFDVVA-QSEKDFKKWAKETKASSPVITQD-IYDRLL 252 Query: 256 APSEYNQVEYFSN 268 P + Y Sbjct: 253 IPGSSKKKTYSGT 265 >UniRef50_Q6MBY6 Probable cytochrome o ubiquinol oxidase chain II cyoA n=2 Tax=Parachlamydiaceae RepID=Q6MBY6_PARUW Length = 295 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 115/260 (44%), Positives = 168/260 (64%), Gaps = 2/260 (0%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 A+L P+G + +++R+L+L LML+VVIP ++ F+WKY A N KY P+ + Sbjct: 38 AILFPEGWVAVKERNLLLIIQALMLLVVIPVYILTFVFSWKYSADNPKGKYDPDLVDNKF 97 Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI 147 E + W +P+++IIFL+VLTW T L+P KP+ D+K ITI+V+++ WKW FIYPE+ I Sbjct: 98 AEFIWWGIPLVLIIFLSVLTWVKTAELDPYKPIISDKKEITIQVIALQWKWLFIYPEEKI 157 Query: 148 ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 AT+N + P +TP++F++T+++ MNSF+IP LG QIYAM MQT L+LIAN G Y G S Sbjct: 158 ATINFLQIPQDTPIHFEITADAPMNSFWIPELGGQIYAMPSMQTELYLIANHTGDYRGSS 217 Query: 208 ASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFS 267 A+ SG GFSGM F + + QW+ AKQS N + + + +A PS+ N VE + Sbjct: 218 ANLSGEGFSGMNF-ITRSSTEEEYQQWLTSAKQSNNIL-NQNEYNLIAKPSKNNPVEIYR 275 Query: 268 NVKPDLFADVINKFMAHGKS 287 + LF I+K+M K Sbjct: 276 LEENSLFDLTIDKYMYPQKK 295 >UniRef50_A0R9Y2 Quinol oxidase, subunit 2 (Cytochrome c oxidase, subunit II) n=3 Tax=Bacillus cereus group RepID=A0R9Y2_BACAH Length = 337 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 85/248 (34%), Positives = 144/248 (58%), Gaps = 5/248 (2%) Query: 24 GCN--SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 GC+ A+L+P+G + Q LI+ +F LM +++ ++ +YR ++ Y P Sbjct: 70 GCDKKLAVLNPQGPVAKAQYDLIVWSFLLMSLIIAIVFILFTVILIRYREKPENMDYEPP 129 Query: 82 WSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 H N + ++WT VP++I+I L++ T K T+A E + KP+ I V S +WKW F Sbjct: 130 EQHGNTLLEIIWTLVPVIIVIALSIPTVKATYASEEVPKESKHIKPVEIYVTSANWKWLF 189 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPE+ I TVN + PA P+ FK+TS MN+F++P LG Y M GM L+L A++P Sbjct: 190 SYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVPELGGMKYTMDGMIMDLYLQADKP 249 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G+Y G SA++SG GF+ M+F+ A + +D+WV + +Q+ +++ + ++ P Sbjct: 250 GSYLGRSANFSGEGFTHMEFEVEA-KTKEKYDKWVKEVQQTAPKLTEDK-YNEIVKPGVV 307 Query: 261 NQVEYFSN 268 ++ + S+ Sbjct: 308 GRMTFSSH 315 >UniRef50_C6D2I7 Cytochrome c oxidase subunit 2 n=2 Tax=Bacillales RepID=C6D2I7_PAESJ Length = 348 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 10/289 (3%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLD---PKGQIGLEQRSLILTAFGLMLIVVIP 57 M ++ + L L L ++LS C + L P+G + EQ L+ A +MLIV++ Sbjct: 1 MNRWQFFRKLAPL-LALMVLVLSACGRSDLSTLRPQGPVAEEQFGLMKLAISIMLIVIVV 59 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 ++ ++R D ++K+E + +PI+++I L V T ++ S Sbjct: 60 VFAISFYVIIRFRRRPGDNTIPKQVEGNHKLEIIWTVIPIILLIILGVPTIQSVF--NLS 117 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 K D + + + V + + W F YPE GI T E+ P + + S V++SF+IP Sbjct: 118 KDHTKDPEAVKVVVTAHQYWWEFEYPELGIKTAQELVIPKGKTISIEAKSADVLHSFWIP 177 Query: 178 RLGSQIYAMAG-MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 L +I A G ++ A + G Y G A GP M FK + D A+FD+W A Sbjct: 178 SLAGKIDANPGANVNIMYFSAPKEGVYLGKCAELCGPSHGLMDFKVKSV-DEASFDRWTA 236 Query: 237 KAKQSPNTMSDMAAFEKL-AAPSEYNQVEYF-SNVKPDLFADVINKFMA 283 + SD A E + + V P+L + + Sbjct: 237 ALQAPVALPSDPAIKEAFVSKCLTCHAVGDQGGPAFPNLTGIGSRETVG 285 >UniRef50_Q81HT3 Quinol oxidase subunit 2 n=80 Tax=Bacillaceae RepID=QOX2_BACCR Length = 291 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 91/271 (33%), Positives = 155/271 (57%), Gaps = 5/271 (1%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCN--SALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 M+L+K L L + + L GC+ A+L+P+G + Q LI+ +F LM +++ Sbjct: 1 MQLKKAFWKLASLLPLSLLLFLGGCDKKLAVLNPQGPVAKAQYDLIVWSFLLMSLIIAIV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHALEPS 117 ++ +YR ++ Y P H N + ++WT VP++I+I L++ T K T+A E Sbjct: 61 FILFTVILIRYREKPENMDYEPPEQHGNTLLEIIWTLVPVIIVIALSIPTVKATYASEEV 120 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 + KP+ I V S +WKW F YPE+ I TVN + PA P+ FK+TS MN+F++P Sbjct: 121 PKESKHIKPVEIYVTSANWKWLFSYPEEKIETVNYLNIPAGVPIQFKLTSVGPMNAFWVP 180 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 LG Y M GM L+L A++PG+Y G SA++SG GF+ M+F+ A + +D+WV + Sbjct: 181 ELGGMKYTMDGMIMDLYLQADKPGSYLGRSANFSGEGFTHMEFEVEA-KTKEKYDKWVKE 239 Query: 238 AKQSPNTMSDMAAFEKLAAPSEYNQVEYFSN 268 +++ +++ A + ++ P ++ + S+ Sbjct: 240 VQETAPKLTE-AKYNEIVKPGVVGRMTFSSH 269 >UniRef50_A9LGT2 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomycetales RepID=A9LGT2_9BACT Length = 324 Score = 221 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 103/270 (38%), Gaps = 13/270 (4%) Query: 25 CNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 + + DP R L + + + + +K+R+ K Sbjct: 13 SSFPVFDPASPQAEAIRDLFVQVLWISGGIFSIVAGLICVALFKFRSKGK---LPAQDFG 69 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD-EKPITIEVVSMDWKWFFIYP 143 S++ E P+++++++A ++ K E+ + V W W Y Sbjct: 70 SHRKEIAWIVAPVIVVLWIAAISAKLVLTFNAVPQAHPPGEQVADLIVTGHQWWWEIEYA 129 Query: 144 EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 I + NEI P + +++S V++SF++ RL ++ A+ G + + L A+EPG Y Sbjct: 130 GTDIVSANEIHIPTGKRLRVQLSSADVIHSFWVARLARKMDAIPGRENFIWLQADEPGVY 189 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK--------LA 255 G A + G + M F A D ++QW++K K P T + A + Sbjct: 190 QGRCAEFCGTQHAWMNFLVHAH-DPEEYEQWLSKEKVVPPTPVEPNAVAGRKTFLSLTCS 248 Query: 256 APSEYNQVEYFSNVKPDLFADVINKFMAHG 285 ++ PDL +A G Sbjct: 249 QCHAIAGTGARRSIAPDLTHLASRSELAAG 278 >UniRef50_Q2IK63 Cytochrome c oxidase, subunit II n=3 Tax=Anaeromyxobacter RepID=Q2IK63_ANADE Length = 337 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 10/261 (3%) Query: 21 LLSGCNSALLDP-KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 LL+G L + + L F + + IL+ + F +YR Sbjct: 11 LLAGAGPGYLPARASSVAEGVDQVFLLLFWVSAFFLALIILLTIVFVLRYRRRATRLHPE 70 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 P+ +HS ++E + +P+ +++ L V++ +T + + P P+ ++V W W+ Sbjct: 71 PSPAHSTRLELLWSVIPLALVMALFVMSTRTWIQMTSADP---GGDPVRVQVTGRKWSWW 127 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 F +P A NE+ A PV +++ V++S ++P + A+ G TRL Sbjct: 128 FDHPSGKGA--NELHVVAGRPVELILSATDVIHSLYVPEFRLKQDAVPGRFTRLTFTPTV 185 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA----AFEKLA 255 PG+Y + A Y G S M + D+A+FD W + + T++D+ A + A Sbjct: 186 PGSYPILCAEYCGTDHSRMLSTVVVHADQASFDAWSKEGLPADATLADLGKQVFAEKGCA 245 Query: 256 APSEYNQVEYFSNVKPDLFAD 276 A + L+ Sbjct: 246 ACHSVDGTRSVGPSVRGLWKR 266 >UniRef50_C8WSR0 Cytochrome c oxidase subunit II n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR0_ALIAD Length = 298 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 111/286 (38%), Positives = 166/286 (58%), Gaps = 6/286 (2%) Query: 18 GTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS-NKDA 76 + + G S++L P G + ++ +I + L +IVV+P I++ W+YR + A Sbjct: 10 ILLTVQGGLSSVLKPAGPVAGQELKIIAGSLILTMIVVVPVIVLFGFILWRYRDKQDNPA 69 Query: 77 KYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 +Y P WS S +E W +PI+II L T K T+AL ++P D KP+TI+V S+DW Sbjct: 70 RYDPEWSESKVLEIAWWGIPIVIIGILGAYTAKVTYAL--TRPPVTDVKPMTIDVTSLDW 127 Query: 137 KWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 KW F YP+QG+ATVNE+ P PV F +T++ MNSF+IP LG Q YAM GM RL L Sbjct: 128 KWLFEYPDQGVATVNELVIPVGVPVAFDLTADGPMNSFWIPSLGGQEYAMPGMVMRLWLE 187 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 A+ PG Y G +A+++G F+GM+FK +A RAAF +WV + KQ + ++ + + +L Sbjct: 188 ASRPGVYYGHAANFTGQQFAGMQFKVVA-TSRAAFSEWVRQLKQVDHPLT-VTLYSQLRQ 245 Query: 257 PSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEG 302 PSE V+ +S+ DLFA+V+ + M H + Sbjct: 246 PSEI-GVQLYSSYPRDLFAEVVWREGGQYMVDSMPSLGSTHVSVSP 290 >UniRef50_B1ZVF0 Cytochrome c oxidase subunit 2 n=2 Tax=Verrucomicrobia RepID=B1ZVF0_OPITP Length = 311 Score = 218 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 107/278 (38%), Gaps = 15/278 (5%) Query: 22 LSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPN 81 ++G + ++ +P L + + ++ +YR DA+ Sbjct: 1 MNGESGSIFNPAAPHAQAISDLFVINLWVCAVIFALVAGAVGYSLVRYRWREGDAE-PVQ 59 Query: 82 WSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI 141 + VE + +P LI++ L LT + P A E + I + W W Sbjct: 60 LAGHTTVEIIWTVIPFLIVVVLFGLTVHAMQKSD---PPAAPEPDLVI--IGHQWWWEIR 114 Query: 142 YPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 P+ G NEI P P+ ++ + V++ F++PRL ++ + G + + A++PG Sbjct: 115 DPKLGYVAANEIHIPVGKPLSIRLDTVDVLHEFWVPRLTRKMTTVPGAGNHVWMQADQPG 174 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK-------- 253 Y G+ + + G + M+F+ IA +A ++ WV + +Q+ A Sbjct: 175 VYQGVCSEFCGTQHAWMRFEVIAE-SQADYEAWVRQQQQAAPAPPTPVAARGQQLFRELT 233 Query: 254 LAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 SN PDL +++ G + Sbjct: 234 CVNCHAIQGAGGTSNAGPDLTHLAGRRYLGAGIVPNTP 271 >UniRef50_C1F1C9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F1C9_ACIC5 Length = 347 Score = 216 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 105/312 (33%), Gaps = 24/312 (7%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSAL--------LDPKGQIGLEQRSLILTAFGLML 52 M + L + L A P + E L + A + Sbjct: 1 MFKQISRGLRSILYAAGCAMFLQAGAWAQTITTNTDSFSPASKPAHEIFGLAIFALAITG 60 Query: 53 IVVIPAILMAVGFAWKYRASNKDAK-YSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT 111 + + +YR D P S ++E +PI+I++ L + + + Sbjct: 61 GIFVVVAAAMFYAVIRYRRRKDDDGSEPPQIFGSVQIEIAWTVIPIIIVVVLFLTSARLI 120 Query: 112 HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANT-----PVYFKVT 166 A+ K + + I VV + W YP GI T NEI P +T P Y K+ Sbjct: 121 FAI---KDAPRPKSALNITVVGHQFWWEIRYPGLGIITANEIHVPVSTKADPQPTYIKLL 177 Query: 167 SNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATP 226 S V++SF++P+L + A+ + G Y G + + G + M + Sbjct: 178 SADVVHSFWVPQLAGKTDAIPNHVNETWIEPTHTGIYKGQCSQFCGAEHAKMLLRV-YVD 236 Query: 227 DRAAFDQWVAKAKQSPNTMSDMAAF------EKLAAPSEYNQVEYFSNVKPDLFADVINK 280 A F+ WV + +Q +AA E E PDL Sbjct: 237 TPAQFEAWVKQQQQPAVEDPAVAAGREVFMHNACMNCHEIRGTEATGRFGPDLTHVASRD 296 Query: 281 FMAHGKSMDMTQ 292 +A G M+ Sbjct: 297 TLASGSVMNNPA 308 >UniRef50_C8WTG4 Cytochrome c oxidase subunit 2 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTG4_ALIAD Length = 279 Score = 216 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 89/280 (31%), Positives = 138/280 (49%), Gaps = 12/280 (4%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCN----SALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 M+ + + + L+GC+ +L P+G + + LI+ +F LML+VV+ Sbjct: 1 MKPKGRRVGGLIALIGFTVLALTGCDSPTYWPVLSPQGPVARSEYYLIIYSFILMLLVVL 60 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSN-KVEAVVWTVPILIIIFLAVLTWKTTHALE 115 ++ KYRA +A Y P N K+E + +PIL++I LA+ T T+ L Sbjct: 61 AVFILFFWVIIKYRARPDNADYVPPEIEGNAKLETLWTVIPILVVIALAIPTVAVTYKLV 120 Query: 116 PSKPLAHD-----EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSV 170 + K ITI+V+S WKW F YP Q I TVN + PA PV F++TS+ Sbjct: 121 YPPKVEAATAKIVGKSITIDVISEQWKWVFKYPAQNIETVNYVNIPAGVPVDFELTSSGP 180 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAA 230 MN+F++P LG + M M +L L A+ PG+Y G A YSG GF+ M F A Sbjct: 181 MNTFWVPALGGMEFTMPNMNLKLWLEADHPGSYLGRGAQYSGRGFAHMTFTVNAL-SPTD 239 Query: 231 FDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVK 270 F+ WV +Q+ ++ A ++ P ++ + S Sbjct: 240 FENWVKSVQQTAPKLTKQAE-AQINRPGLIGKLTFSSTTP 278 >UniRef50_D1RCQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Legionella longbeachae D-4968 RepID=D1RCQ5_LEGLO Length = 401 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 64/328 (19%), Positives = 122/328 (37%), Gaps = 37/328 (11%) Query: 1 MRLRKYNKSLGWLSLFAGT--VLLSGCNSALLDPKG--QIGLEQRSLILTAFGLMLIVVI 56 + K K + L ++ G+ + + N L +G I + L + + ++ + Sbjct: 2 LNRLKICKLIIMLGVWCGSQPIFAAANNWQLNMYEGVTPISKDAYYLHMVCMAVCAVIGV 61 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP 116 + + +R S + ++ + ++E +P LI++ LA+ + ++ Sbjct: 62 VVFGVMIYSMIHHRKSKG--YKAASFHDNPRLEIFWSVIPFLILVGLAIPATRVLMRMDD 119 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGI-------------------------ATVN 151 ++ IT+++V WKW + Y +QGI Sbjct: 120 TRQSE-----ITVKIVGYQWKWQYEYLDQGISYFSILSTPFNQIENTQKKNEWYLLEVDK 174 Query: 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYS 211 + P N V F VTSN V++S+++P LG + A+ G +PGTY G A Sbjct: 175 PLVLPVNKKVRFLVTSNDVVHSWWVPELGIKRDAIPGFMYEAWATIEKPGTYRGQCAELC 234 Query: 212 GPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 G M A + FD+WVA +S + ++ A E + +++ F K Sbjct: 235 GVNHGFMPIVVEAV-SQDDFDKWVASQTKSEDKYANEEAAEAVQKTMTRDELLAFGKEKY 293 Query: 272 DLFADVINKFMAHGKSMDMTQPEGEHSA 299 D ++ G A Sbjct: 294 DQICSPCHRPDGMGIPPLYPALRASSVA 321 >UniRef50_Q4L565 Probable quinol oxidase subunit 2 n=63 Tax=Bacillales RepID=QOX2_STAHJ Length = 374 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 96/261 (36%), Positives = 141/261 (54%), Gaps = 8/261 (3%) Query: 8 KSLGWLSLFAGTVLLSGC-NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 K L +F +LLSGC N + + KG + Q+ LI+ + ML++V + M F Sbjct: 3 KFKSLLLMFGTLILLSGCSNVEVFNAKGPVASSQKFLIIYSIIFMLVIVAVVLTMFAIFI 62 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP 126 +KY + + H++ +E + + VPI+I+I L++ T KT + E KP E P Sbjct: 63 FKYSYNKNSE--TGKMHHNSLIETIWFVVPIIIVIALSIPTVKTLYDYE--KPPESKEDP 118 Query: 127 ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + + VS +KWFF YPEQ + TVN + P N PV FK+ + M SF+IP+LG Q YAM Sbjct: 119 MVVYAVSAGYKWFFAYPEQKVETVNTLTIPKNRPVVFKLQAMDTMTSFWIPQLGGQKYAM 178 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 GM L A+E GT+ G +++++G GFS FK + D++ FD WV AK Sbjct: 179 TGMTMNWTLQADETGTFRGRNSNFNGEGFSRQTFKVHSV-DQSEFDSWVKDAKSKKTLSQ 237 Query: 247 DMAAFEKLAAPSEYNQVEYFS 267 D F+K PS N+ FS Sbjct: 238 D--EFDKQLLPSTPNKELTFS 256 >UniRef50_A5GCS3 Cytochrome C oxidase subunit II, transmembrane region n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GCS3_GEOUR Length = 311 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 94/250 (37%), Gaps = 14/250 (5%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY-SPNWSHSNKVEAVV 92 GQ+ E +L + + L + + FA +YR + + +P + + +E V Sbjct: 10 GQLAEEVDALFIFILLVGLFFFLITQGALIWFAVRYRKRKGEKEPDTPYITGNRLLETVW 69 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 VP +I+ + + + + P I V + W + F Y G VNE Sbjct: 70 VVVPSFLILAIFIYGYLVFRDIRTPPPGTA-----EINVTARQWLYLFKY-PDGRTAVNE 123 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P PV F +TS V++ F++P + + G T L L + G YD Y G Sbjct: 124 VRVPQGKPVRFIMTSADVIHGFYLPEFRLKQDILPGSYTSLWLQPEKEGKYDIYCTQYCG 183 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQSP------NTMSDMAAFEKLAAPSEYNQVEYF 266 G S M+ I P+ + +W+A ++ ++A A + Sbjct: 184 TGHSTMRAVMIVMPE-EEYREWLAGKEEEEKGEPLWEKGKELAEKSGCLACHSIDGSPKI 242 Query: 267 SNVKPDLFAD 276 LF Sbjct: 243 GPTWKGLFGR 252 >UniRef50_B2JCA5 Cytochrome c oxidase subunit 2 n=109 Tax=Proteobacteria RepID=B2JCA5_BURP8 Length = 557 Score = 213 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 63/345 (18%), Positives = 108/345 (31%), Gaps = 53/345 (15%) Query: 1 MRLRKYNKSLGWL---SLFAGTVLLSGCNSA--------LLDPKGQIGLEQRSLILTAFG 49 M+ K + LFAG L G + L P +I E SL Sbjct: 9 MKTIKRALTGVLACSGLLFAGAALAVGDSPGGPRVNEINLQPPVTRIAEELYSLHTFMLI 68 Query: 50 LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWK 109 L ++ I + + +R S + N+ S VE + VP +I++ +A+ K Sbjct: 69 LCTVIFIGVFGVMFYSIFAHRKSKG--YKAANFHESTTVEIIWTVVPFIIVVLMALPATK 126 Query: 110 TTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY--------------------------- 142 T A+ +T++V WKW + Y Sbjct: 127 TVVAM-----KDTTNADLTVKVTGYQWKWAYDYVKGPGEGINFFSTLTTPRAEVDGRQPI 181 Query: 143 -PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 N + P N + T+N V++S+++P G + A+ G A + G Sbjct: 182 TDTYLQEVDNPLVVPVNKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFRAEKVG 241 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYN 261 TY G G + M + + +WV K+ D A Sbjct: 242 TYRGFCTELCGKEHAFMPV-VVNVLSDEDYAKWVDDQKKKMAAGQDDPNKNYTLAELMER 300 Query: 262 QVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGM 306 + +S V ++ G +G A+ + Sbjct: 301 GGKVYSA-----NCAVCHQPTGKGAG-AFPALDGSKVANGPLAEH 339 >UniRef50_B9NVN8 CytOchrome o ubiquinol oxidase, subunit II n=2 Tax=Rhodobacteraceae RepID=B9NVN8_9RHOB Length = 352 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 102/311 (32%), Positives = 162/311 (52%), Gaps = 16/311 (5%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 +SL L + +G + + LDP+G I Q++ +L A L+LI VIP +++ Sbjct: 42 LIRSLAILLAVLVSAQTAGASDSFLDPQGPIAAVQKTHLLRATALILIAVIPVLILVPVI 101 Query: 66 AWKYRASNK-DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 A +YR A Y P+W S +E ++W VP++I+ L+ WK TH L+P +E Sbjct: 102 ALRYRRRKGGTAAYRPHWDFSGGLEVLMWGVPVVIVAILSFYLWKATHRLDPYTAPFGEE 161 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 + ++VV +DWKW FIYP+ GIA+V E+ P V +T+++VM SF IP L QIY Sbjct: 162 PALRVQVVGLDWKWLFIYPDLGIASVGELGIPVKQQVAMTLTTDTVMQSFMIPALAGQIY 221 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 AM GM T+LH++A+ P T G + Y+G GF+ KF+ +A F+ WV K + + Sbjct: 222 AMPGMTTQLHVVADTPETMQGENTQYNGRGFTKQKFQTLAMQT-DDFNAWVEKVQANG-I 279 Query: 245 MSDMAAFEKLAAPSEYNQVE-------------YFSNVKPDLFADVINKFMAHGKSMDMT 291 + D ++ LA S+ ++V+ YF DLF +++++ + Sbjct: 280 LLDPVTYQTLAMRSDRDEVQAELGTAQMPEGALYFKLDDGDLFHSILHRYHSGKPLPLDQ 339 Query: 292 QPEGEHSAHEG 302 QP E Sbjct: 340 QPGTSEYGQET 350 >UniRef50_A9B5D1 Cytochrome c oxidase subunit 2 n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5D1_HERA2 Length = 359 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 115/303 (37%), Gaps = 21/303 (6%) Query: 1 MRLRKYNKSLG--WLSLFAGTVLLSGCNS----ALLDPKGQIGLEQRSLILTAFGLMLIV 54 M R K+L +L G+V+L+ C L+P + +L F L ++V Sbjct: 1 MPNRSPAKALLRPTATLLLGSVVLAACGQKTPQTTLNPASESTRAIYNLSELLFWLGVVV 60 Query: 55 VIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL 114 + + KYR ++ + KVE VP +I I + V T+ T + Sbjct: 61 FLIVQTWLIVSIIKYRQ-KDSSQIPTQIHGNTKVEIAWTIVPAIIAIVIFVFTFDTIRKI 119 Query: 115 EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG------IATVNEIAFPANTPVYFKVTSN 168 E P + ++V+ W W F YP+ + T NE+ P+ + + K+TS Sbjct: 120 E-FMPDEAAGNTLNVKVIGHQWWWEFQYPDIKDASGKPLVTANELWIPSGSYIDVKMTSV 178 Query: 169 SVMNSFFIPRLGSQIYAMAGMQTRLHLIAN-----EPGTYDGISASYSGPGFSGMKFKAI 223 V++ F+IP L + M ++ L A+ P + G A Y G + MK + Sbjct: 179 DVIHDFWIPGLAGKRDVMPNRESGLWFKADDVADGSPAVFWGQCAEYCGGQHAYMKMRV- 237 Query: 224 ATPDRAAFDQWVAKAKQSPNTMSDMAAF-EKLAAPSEYNQVEYFSNVKPDLFADVINKFM 282 A F +W ++ Q + +F + PDL + Sbjct: 238 VVASPADFQKWSSEQSQVAVNTTLPESFTKNCIGCHVVRGTNAAGITGPDLTHFGGRMTI 297 Query: 283 AHG 285 A G Sbjct: 298 AAG 300 >UniRef50_Q1H1C0 Cytochrome c oxidase subunit 2 n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H1C0_METFK Length = 346 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 112/321 (34%), Gaps = 32/321 (9%) Query: 16 FAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 F L + N + L P+G + L + +++ + M RA N Sbjct: 25 FMCICLPADANQSALQPEGPLAKVVADLFWGMVAVGGLILFIVLAMLAVALL--RARNNA 82 Query: 76 AKYSPNWSHSNKVEAVV-WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 ++ S + + +P LI+ + + + P E +TI+V Sbjct: 83 EPRPLTFTQSRNLVFISGVVIPALILTVFVISSAAVNREIVAPMP----EHALTIKVTGH 138 Query: 135 DWKWFFIYPEQGI----ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 W W Y + T NEI P PV + ++ V++SF+IP+L + + G + Sbjct: 139 QWWWEVDYLDTEGNHVAKTANEIRIPVGKPVRIALEASDVIHSFWIPQLNGKTDMVPGKR 198 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 + A++PG+Y G + G + M F A P+ F+ W+ + Q + Sbjct: 199 NLTWVQADQPGSYRGQCTEFCGKQHAKMAFTVDAVPE-EDFETWLQRQAQPAREPATENE 257 Query: 251 FEK--------LAAPSEYNQVEYFSNVKPDLFADVINKFMAHGK------------SMDM 290 + A ++V PDL K +A G Sbjct: 258 TKGRQVFLRSSCAMCHAIRGTTALASVAPDLTHIGSRKTLAAGTLENMPGTLSAWILTPQ 317 Query: 291 TQPEGEHSAHEGMEGMDMSHA 311 + G H + G D+ + Sbjct: 318 SFKPGSHMPATMLTGEDLGNL 338 >UniRef50_Q01PD2 Cytochrome c oxidase subunit 2 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PD2_SOLUE Length = 341 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 97/274 (35%), Gaps = 16/274 (5%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA-KYSPNWSHSN 86 + P L L + + + + ++R + D + P SN Sbjct: 30 TIFSPVSTPADSIFHLSLFVLAVAAAIFTVVFSLLIYSLVRFRKRSDDDGREPPQIYGSN 89 Query: 87 KVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 +VE VPILI++ L + T + + + + + V + W F YP Sbjct: 90 QVELAWTVVPILIVVTLFMATARVIAG---TLKASRPSSSVEVVAVGHQFWWEFRYPGLK 146 Query: 147 IATVNEIAFPANTPVY-----FKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 + T NE+ P + P + +TS +SF++PRL + + + + +EPG Sbjct: 147 VVTANELHVPLSEPGHPTPTFITLTSADTDHSFWVPRLAGKTDLIPNRVNTMWIDPHEPG 206 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK------LA 255 Y G A Y G + M + R F +W+ + +Q + + A + Sbjct: 207 LYLGQCAQYCGTQHAKMLLRV-YVQTRDEFARWIQEQRQPAHAEDSVYAGRQIFETTACI 265 Query: 256 APSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 PDL + +A G + Sbjct: 266 NCHTVTGTTAHGTFGPDLTHLMSRDTIASGAVPN 299 >UniRef50_C6NXQ9 Cytochrome O ubiquinol oxidase subunit II n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NXQ9_9GAMM Length = 323 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 112/308 (36%), Positives = 168/308 (54%), Gaps = 16/308 (5%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILM 61 K +K+ L L ++L GC+ + LL P+G I L G+ML+++IP L+ Sbjct: 6 KRSKTWPRLVLPPILLMLGGCSRSGLFLLKPEGLISHTFYHYFLLDVGIMLLIIIPTTLL 65 Query: 62 AVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL- 120 A+ W+YR + Y P WSHS +EAVVW +P++ + L+ L+ K + + P P Sbjct: 66 ALWAMWRYRKG-GNGSYHPRWSHSYAIEAVVWGIPLVTVGVLSYLSVKAIYDVNPYNPEV 124 Query: 121 ------AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSF 174 A P+ ++V++ DW+W FIYP+Q IA+V+E+ P TPV F++TS SV+N F Sbjct: 125 ITKAQRAAGGDPVEVDVIATDWRWLFIYPQQHIASVDELVVPVGTPVRFRLTSTSVVNDF 184 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 IP+L I M GM+T+ ++A++ GTY G SA YSG G S M F+ A F QW Sbjct: 185 IIPQLVGMIDVMPGMRTKQAMVADKAGTYVGYSADYSGAGLSWMHFQTKAV-SPTQFTQW 243 Query: 235 VAKAKQSPNTMSDMAAFEKLAAP--SEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ 292 VA AK SP ++ A F + A P + + F +V+P LF V+ + M GK Sbjct: 244 VAHAKSSPQRLT-YAGFNRFARPYIAVGGDQQIFGHVQPGLFDHVVMEVM-RGKVWPTPM 301 Query: 293 PEGEHSAH 300 E+ + Sbjct: 302 AMTENMVN 309 >UniRef50_Q0BPU5 Cytochrome c oxidase subunit 2 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPU5_GRABC Length = 300 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 93/256 (36%), Gaps = 29/256 (11%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 + G + SL ++ +V+ + A+++ A SH Sbjct: 52 GMQTAYGPLKERIDSLHDLIMVIITAIVVFVAALLGWCAYRFSAKRN--PVPSRTSHHTW 109 Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI 147 +E +P LI+ +A+ +++ + + + +T++V + W W + YP+ GI Sbjct: 110 LEIAWTLIPALILAVIAIPSFRLVYYEDRTH-----NPDVTLKVTAHQWYWEYGYPDNGI 164 Query: 148 AT---------------------VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 + N++ P V VTS V++SFFIP LG Q YA+ Sbjct: 165 DSIESRVIQDGDLKPDQIRLLSVDNQVVVPYGKNVRVLVTSADVIHSFFIPSLGVQRYAI 224 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 G ++PG Y G G S M A F +W K +++ Sbjct: 225 PGRTIETWFRVDKPGVYYGECNQICGAFHSQMPIAVKAV-SPEEFQKWAESQKTKKTSLN 283 Query: 247 DMAAFEKLAAPSEYNQ 262 + A + + Sbjct: 284 NTPAGQTIPRQFAEGG 299 >UniRef50_Q2YCN0 Cytochrome c oxidase subunit 2 n=4 Tax=Betaproteobacteria RepID=Q2YCN0_NITMU Length = 377 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 104/334 (31%), Gaps = 60/334 (17%) Query: 19 TVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 + L+ + L +P+ I + + L + + + ++R S Sbjct: 20 GLALAAADPYQLNLPEPQTVIAQQIYDQHTLVLWICLAIFVGVFGVMFYSVIQHRKSKG- 78 Query: 76 AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMD 135 + N+ HS VE + +P LI+I +A KT A+ IT++ Sbjct: 79 -YKAANFHHSTTVEIIWTAIPFLILIGMAFPATKTVIAM-----KDTSNPDITVKATGYQ 132 Query: 136 WKWFFIYPEQG----------------------------IATVNEIAFPANTPVYFKVTS 167 WKW + Y + + P V +T+ Sbjct: 133 WKWGYDYLTGEGEGIGFLSALATPKAQIENAAPKGENYLLEVDKPLVVPTGKKVRVLITA 192 Query: 168 NSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPD 227 N V++++++P LG + A+ G + +PGTY G A G M A + Sbjct: 193 NDVLHAWWVPALGVKQDAIPGFIRDVWFNIEKPGTYRGQCAELCGKEHGFMPIVVEAV-E 251 Query: 228 RAAFDQWVAKAKQSPNTMS---------------DMAAFEK-LAAPSEYNQVEYFSNVKP 271 + WVA+ K ++ A + AA + N P Sbjct: 252 PEKYAAWVAEQKTKLAAVAVDVNKEFGLDELKAKGEAVYNANCAACHQANGQGV-----P 306 Query: 272 DLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEG 305 F + +A G + M Sbjct: 307 GTFPAIAGSKVATGPKDGHINIVMNGKSGTAMAP 340 >UniRef50_A4YQP6 Cytochrome o ubiquinol oxidase, subunit II n=3 Tax=Bradyrhizobium RepID=A4YQP6_BRASO Length = 277 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 104/277 (37%), Positives = 160/277 (57%), Gaps = 4/277 (1%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 + DPKG I Q+++++ + +ML +++P + + FAW +R+SN A+Y P++++S Sbjct: 2 NIFDPKGPIAAAQQTILIDSVIIMLAIIVPTSIAVLAFAWWFRSSNGKARYRPDFAYSGA 61 Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI 147 VE VVW++P L +I L + W +H L+P+KP+ PI I+ VS+DWKW FIYP+Q + Sbjct: 62 VELVVWSIPTLTVILLGGVAWIGSHQLDPAKPVDGTGLPIRIQAVSLDWKWLFIYPDQRV 121 Query: 148 ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 ATVN + P P+ F++TS SVM +FFIP+LG IY M GM TRL+L + G Y G++ Sbjct: 122 ATVNSLTVPIGAPLQFELTSGSVMTAFFIPQLGGMIYTMNGMVTRLNLRGDHVGIYKGLA 181 Query: 208 ASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFS 267 + +SG GF M F F WVA A +S + D A++++LAA S + Sbjct: 182 SQFSGDGFPDMMFDTNVVAQP-DFTNWVANAAKSDQVL-DEASYKQLAAQSVEKTPRTYR 239 Query: 268 NVKPDLFADVINKFM--AHGKSMDMTQPEGEHSAHEG 302 P+LF + + + A G + Q E A Sbjct: 240 LSDPELFGKIAMQHIPPAPGPQLSENQAREESGASHA 276 >UniRef50_Q04PG8 Cytochrome c oxidase subunit 2 n=7 Tax=Bacteria RepID=Q04PG8_LEPBJ Length = 333 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 98/302 (32%), Gaps = 33/302 (10%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 + WL+L T + ++ +L L LI + I F +KY Sbjct: 1 MTWLNLITATSFMPVQ-------ASEVAKNVDNLYLFLLVSGLISFVILIGGMTWFIFKY 53 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R +A + +H+ E + +P++I+I + W+ H++ + I Sbjct: 54 RR-KTEADKTAYITHNTLAEFLWSFIPLVIMIVIFWWGWRIF----ADLRSVHEKGDLEI 108 Query: 130 EVVSMDWKWFFIYPEQGIAT-------------VNEIAFPANTPVYFKVTSNSVMNSFFI 176 V + W+W F YP N I P +TS V++SF++ Sbjct: 109 HVTARQWQWTFKYPNGVTVVSPNATEKLNTLFQPNGIYVPVGKTTRLVMTSQDVIHSFYV 168 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 P +++ A+ G T L E G + + G S M D FD+W A Sbjct: 169 PAFRNKMDAIPGRYTTLTFTPTEKGDFVVYCTEFCGTSHSNMLSAIRVV-DPEIFDKWYA 227 Query: 237 KAK-------QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 A + A + A + LF G + D Sbjct: 228 AAGNVDLSKIPPVELGKKLYAEKACAGCHSTDGSRLVGPSYKGLFGSTREFESGPGATAD 287 Query: 290 MT 291 Sbjct: 288 EN 289 >UniRef50_C1XKJ9 Cytochrome c oxidase subunit 2 n=2 Tax=Meiothermus RepID=C1XKJ9_MEIRU Length = 355 Score = 211 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 116/301 (38%), Gaps = 27/301 (8%) Query: 6 YNKSLGWLSLFAGTVLLS-------GCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIP 57 +SLG + L ++L+ G +LD E R L++ G +V + Sbjct: 2 LQRSLGLIVLLMLGLVLAAEPGQAGGHTLNILDRDASAFNREVRGLLVWVMGFAALVFVV 61 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 V K+R + K+ ++++E +P +I++ + LT ++ L+ Sbjct: 62 VTGALVYVTVKFRRTGKETGEPEQMHGNDRLEVAWTVIPTVIVLIIFGLTAQSMFKLDRP 121 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVT-----SNSVMN 172 P + +EV + W F Y + G+ NE+ P PV F++T + V++ Sbjct: 122 TP-----GAMVVEVRGWQFWWDFHYKDYGVRNSNELILPVGKPVRFEITGGDGTNYDVIH 176 Query: 173 SFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFD 232 SF I + A+ G+ T + + + GTY G G + M+F+ P + FD Sbjct: 177 SFRITSMVGARDAIPGVVTHIEVTPEKIGTYYGQCVELCGASHANMRFRVKVVP-QEEFD 235 Query: 233 QWVAKAKQSPNTMSDMAAF--------EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAH 284 +W+ A+ ++ AA V + PDL + Sbjct: 236 RWIEGARAFQAATPTDPTLVRGQELYKQQCAACHAIKGVSQGAPNNPDLTFFGNRTTVGA 295 Query: 285 G 285 G Sbjct: 296 G 296 >UniRef50_D0MDE2 Cytochrome c oxidase subunit 2 n=3 Tax=Rhodothermaceae RepID=D0MDE2_RHOM4 Length = 316 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 91/271 (33%), Gaps = 13/271 (4%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 + L + I E SL + I+ I + F +YR +D P Sbjct: 10 TAWLPEAASSIAPEVDSLFHFWTLVSAIIFIGVVGAMTFFVVRYRRRRRDEVPEPVQEK- 68 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 VE VP ++++ + ++ + I V W W F Y Sbjct: 69 KVVELAWIVVPTILVLIVFAWGFRVYIKM-----YTAPPDAYEILVHGYQWYWEFEY-PN 122 Query: 146 GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDG 205 G+ T NE+ PA PV ++TS V++SF++P + + + L A +PG Y Sbjct: 123 GVKTTNELHVPAGQPVKLRMTSADVIHSFYVPAFRVKQDVLPDRYSALWFEATKPGEYTV 182 Query: 206 ISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS-----PNTMSDMAAFEKLAAPSEY 260 Y G +GM K I P R F+QW+ A + + + + Sbjct: 183 FCTEYCGTQHAGMLAKVIVHP-REEFEQWLESAGIPEDMPLAELGARLYREKACFSCHSI 241 Query: 261 NQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 + L+ D Sbjct: 242 DGSRLVGPSFKGLYGSTRTFEDGTTAVADEN 272 >UniRef50_B1HVF0 Quinol oxidase subunit 2 n=6 Tax=Bacillaceae RepID=B1HVF0_LYSSC Length = 301 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 14/311 (4%) Query: 7 NKSLGWLSLFAGTVLLSGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 K LLSGC + +PKG + I+ + M +++ ++ Sbjct: 3 KKLSLMFVALGALALLSGCEPLTVFNPKGPNAETLSNTIILSIITMAFILLVVYVLLAFM 62 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAV-VWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 KYRAS A Y P + + + +PI+I+ FLAV+T +TT +E D+ Sbjct: 63 LTKYRASKTAADYEPPHEEGSHLLEITWTVIPIIIVAFLAVVTVRTTSTVEAQPAGYDDK 122 Query: 125 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 +P+ I S +WKW F YPE+G+ TVN + P + P+ FK+ S + SF+IP+L Q Y Sbjct: 123 EPLVIYASSSNWKWHFSYPEEGVETVNYVNIPVDRPIEFKLYSFGPITSFWIPQLAGQKY 182 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT 244 AM+ M T +HL A+E G++ G +++++G GF+ M+F+A + + FD+WVA K Sbjct: 183 AMSDMLTTIHLAADEVGSFMGRNSNFNGRGFAEMEFEAQSM-TQEDFDKWVADVKAKEKP 241 Query: 245 MSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGME 304 +++ E L A + FS+ + M HGK+M M + H M Sbjct: 242 LTEEKFDELLKAEHVGR--QSFSSTHLEFSPAP----MEHGKNMKMGDMD-----HGDMS 290 Query: 305 GMDMSHAESAH 315 DM++ S H Sbjct: 291 EEDMNNEHSGH 301 >UniRef50_A8IDL7 Cytochrome c oxidase subunit 2 n=29 Tax=Alphaproteobacteria RepID=A8IDL7_AZOC5 Length = 313 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 101/271 (37%), Gaps = 38/271 (14%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNS---------ALLDPKGQIGLEQRSLILTAFGLM 51 M LR+ S + G L + L + RS ++ Sbjct: 32 MSLRRAGALAVAASCWMGLSLAAAHAGLGQPSDWQMNLQQAATPVMESIRSFNTFLLVII 91 Query: 52 LIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT 111 +V+ +++ ++ + K +H+ +E VP++I++ +A+ +++ Sbjct: 92 SSIVLFVLVLLAICIVRF--NEKANPVPSKTTHNTLLEVAWTVVPVMILVAIAIPSFRLL 149 Query: 112 HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG---------------------IATV 150 H L E +T++V W W + YP+ G +A Sbjct: 150 HLE-----LHTPEPDMTVKVTGHQWYWSYEYPDNGGFGFDSLMVAEKDLKPGQPRLLAVD 204 Query: 151 NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASY 210 NE+ P N V VTS V++SF +P G +I A+ G A + G Y G + Sbjct: 205 NEVVVPVNKVVRIHVTSADVIHSFAVPSFGVKIDAIPGRLNESWFKATKEGVYYGQCSEL 264 Query: 211 SGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 G + M + FD W+A+AKQ Sbjct: 265 CGRDHAFMPLAVRVV-SQQDFDAWLAQAKQK 294 >UniRef50_A9F508 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F508_SORC5 Length = 316 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 92/270 (34%), Gaps = 12/270 (4%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 + L + + A+ +I I V FA KYR ++ K SP HS Sbjct: 11 SFWLPRQGSTLAEHIDAGWDAAYWTAVIFFILVTGAVVLFALKYRRRSERDKTSP-IDHS 69 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 VE V +P+ I+I L + + + I V + W F Y Sbjct: 70 TTVEVVWTLIPLAIVIALFFVGLRGYVH-----ASVAPAESYEINVTGEMYMWTFTY-PD 123 Query: 146 GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDG 205 G TVNE+A P PV ++S +++SF+IP + + G T L A E Sbjct: 124 GTTTVNELAVPRGRPVRLIMSSKDILHSFYIPEFRVKQDVVPGSYTSLWFEATETRETVL 183 Query: 206 ISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA----AFEKLAAPSEYN 261 + Y G G S M +++ F++W+ S ++ A A + Sbjct: 184 LCTEYCGSGHSDMLATVKVL-EQSDFEKWLEGNNNSDLPPEELGKLLFAKRSCATCHSLD 242 Query: 262 QVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 LF D Sbjct: 243 GTRIQGPSLKGLFGREEELADGAKVIADEN 272 >UniRef50_D0DDN4 Ubiquinol oxidase subunit 2 n=1 Tax=Citreicella sp. SE45 RepID=D0DDN4_9RHOB Length = 319 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 103/297 (34%), Positives = 160/297 (53%), Gaps = 15/297 (5%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNW 82 S L P G + QR G +I ++P ++ W+YR N+ A+Y+P+W Sbjct: 22 SSSRDTFLIPGGPVAAAQRVEFFHIIGWTMIAILPVFVLVPLLLWRYRYRNEKARYTPDW 81 Query: 83 SHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY 142 S +E+++W VP++I+ L+V ++TTH L+P+K LA D P+ ++VV +DWKW FIY Sbjct: 82 ERSPILESLMWGVPLIIVAVLSVQLYRTTHELDPTKTLASDNPPLRVQVVGLDWKWLFIY 141 Query: 143 PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 P+ GIATVN++AFP NT V +T+++VM S I L QIYAM GM+TRLH++A PG Sbjct: 142 PDLGIATVNQLAFPENTSVALDLTTDTVMQSLLISSLAGQIYAMPGMRTRLHILAEAPGV 201 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQ 262 ++G + ++G GF KF+AIA + AFD W+ K ++ + +LA S + Sbjct: 202 FEGENTQFNGTGFPAQKFQAIAM-TQEAFDAWIRSVKADGAPLTAEG-YARLAQASTGAE 259 Query: 263 VEY-------------FSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGM 306 FS+V+ DLF ++ ++ + QP G Sbjct: 260 ARAEMGGAGGPVDAIHFSSVEGDLFGAILRRYTSGAAVPPARQPGAVGYDPNARAGE 316 >UniRef50_D1YAK0 Cytochrome c oxidase subunit 2 n=3 Tax=Propionibacterium acnes RepID=D1YAK0_PROAC Length = 302 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 28/267 (10%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNS---------ALLDPKGQIGLEQRSLILTAFGLMLI 53 R K+ G + V LSGC S L+DP + ++ + A+ L+ Sbjct: 20 RRAAGKAGGICAAVIAVVALSGCGSTGPGRAARLGLVDPASDRAVHMGNMWIGAWVAALV 79 Query: 54 VVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHA 113 + + + A+K+R + D + +E + VP L+I L T +T Sbjct: 80 IGVFVWGLIGFAAFKFRRKDGDPAIPRQSRYHLPLEVLYTIVPFLVIGVLFFYTVRT--- 136 Query: 114 LEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--------------IATVNEIAFPANT 159 E + + VV W W F Y E I + ++ P N Sbjct: 137 -ENKVLDKDPDPQHVVNVVGQKWSWTFNYMEANNPDAGGVVTHEVGTIEKIPDLYLPVNQ 195 Query: 160 PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 V F++ S V++SF++P ++ + G + L + G YDG A G + M Sbjct: 196 SVRFRLKSADVIHSFWVPAFYFKMDVIPGHPNQFDLTPTKIGVYDGKCAELCGTYHANMI 255 Query: 220 FKAIATPDRAAFDQWVAKAKQSPNTMS 246 FK +++ + + K +T Sbjct: 256 FKVHVV-SVEDYNKHLQQLKAQGDTGE 281 >UniRef50_B3Q582 Probable cytochrome c oxidase protein, subunit II n=2 Tax=Rhizobium etli RepID=B3Q582_RHIE6 Length = 332 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 109/288 (37%), Gaps = 25/288 (8%) Query: 14 SLFAGTVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 SLF + LS C + L+ G +E R L+L + +V + + + + Sbjct: 8 SLFPHLLFLSSCTGDPQSALNADGPSAMELRELLLLFVAVCGVVFVLVMAVMAWALLR-- 65 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIII-FLAVLTWKTTHALEPSKPLAHDEKPITI 129 SN A P S V +++I FL V ++ T +++ + P TI Sbjct: 66 -SNNPAPGRPQTERSMGRAVSAAIVGTVLVITFLTVSSFYATRSID-----WREADPATI 119 Query: 130 EVVSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 V W W F Y + T NE+ P T V ++ + V++SF++P L + Sbjct: 120 VVRGQQWWWQFTYLDADPAKTFQTANELHIPVGTDVRLRLEATDVIHSFWVPNLTGKQDL 179 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 + G + L L A+ PG Y G A + G S M +A + + +W+ +++ Sbjct: 180 VPGRENGLTLHADNPGIYRGQCAEFCGLQHSHMALLVVAE-EPDEYARWLDAQRRAAVEP 238 Query: 246 SDMAAFEK--------LAAPSEYNQVEYFSNVKPDLFADVINKFMAHG 285 +D A AA PDL + G Sbjct: 239 ADGDAAAGKLVFISKPCAACHTVRGTAAGGISGPDLTHVGSRSMIGAG 286 >UniRef50_Q0ABY9 Cytochrome c oxidase subunit 2 n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABY9_ALHEH Length = 311 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 104/289 (35%), Gaps = 50/289 (17%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIG--LEQRSLILTAFGLMLIVVIPAILMA 62 K L + L A + G SAL P+G + L + F + + + + Sbjct: 2 KAALLLCGVGLSAFSSAALGGFSALNMPRGPTALSQDVYDLHMLVFWICVAIGVVVFGAI 61 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH 122 +R S +SHS ++E V +P +I+I +AV KT +E Sbjct: 62 FYSILTHRKSRGVK--PSQFSHSTRLEVVWTIIPFVILIVMAVPATKTLLDME-----DV 114 Query: 123 DEKPITIEVVSMDWKWFFIYPEQG---------------------------------IAT 149 + +T++V W W + Y + + Sbjct: 115 SDYDLTVKVTGYQWLWHYEYMDGDAEGTAFYSSMDRDTRLARIRANGLSPADVDNYLLEV 174 Query: 150 VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 N + P V F +TSN V++S+++P G + + G + +EPGTY G A Sbjct: 175 DNPLVLPVGKRVRFLLTSNDVIHSWWVPEFGWKKDTIPGFVNEAWVQVDEPGTYRGQCAE 234 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPS 258 G + M + + + WV + + A E+LAAP Sbjct: 235 LCGRDHAFMPI-VVVVKEEEDYLAWVDEQ-------VNGAGGEQLAAPG 275 >UniRef50_A4VKM4 Heme/copper-type cytochrome/quinol oxidase, subunit 2 n=4 Tax=Proteobacteria RepID=A4VKM4_PSEU5 Length = 532 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 118/297 (39%), Gaps = 18/297 (6%) Query: 4 RKYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILM 61 R+ W +L LL GC + L P G + + ++ FG ++V+ + Sbjct: 203 RRGGNPFKWTTLALAVPLLLGCEGPQSALSPAGPMARDVANVWWAMFGFSVVVLAVVSAL 262 Query: 62 AVGFAWKYRASN---KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 + + ++ + + + W + V+ TV I+ ++ + T ++ Sbjct: 263 WIYAMLRQPRTHSAEEAKRINRRWIIGGGL--VLPTVSIVALLAFGIPTGRSM-----LP 315 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 E+P+ ++V+ W W YPE G+ T N+ P + PV +VTS V++SF++PR Sbjct: 316 LPVEGEQPLRVQVIGHQWWWEVRYPESGVVTANQFILPIDRPVDVEVTSADVIHSFWVPR 375 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 LG ++ + G L L A++ G + G + + G + M A + AF W+ Sbjct: 376 LGGKLDMVPGRTNTLRLQASQTGVFRGQCSEFCGSQHAHMILHVEAL-EADAFATWIEAR 434 Query: 239 K----QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 Q P + E+ V N PDL + G + Sbjct: 435 TGREHQPPGGAAGQVFDERCGQCHRVAGVS-DGNRAPDLSDLATRPTLGAGVIANDA 490 >UniRef50_Q089E4 Cytochrome c oxidase subunit 2 n=102 Tax=cellular organisms RepID=Q089E4_SHEFN Length = 528 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 114/342 (33%), Gaps = 54/342 (15%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKG--QIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 + L L + + L L +G I + L +T + ++ + + + Sbjct: 2 KQWLYCLLVVFVALPLGATEMPLNMTQGVTDISGKVYDLHMTILYICCVIGLVVFGIMIY 61 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 +R S + N+ S KVE +P +I+I +A+ KT A+E + Sbjct: 62 SMIYHRKSKGA--VAANFHESTKVEIAWTVIPFIILIGMAIPATKTLIAME-----DPSD 114 Query: 125 KPITIEVVSMDWKWFFIYPEQGIA-------------------------TVNEIAFPANT 159 +TI++ WKW + Y ++ I + P N Sbjct: 115 ADLTIKITGSQWKWHYSYFDKDIEFYSTLSTPRAQIDGSEAKGEHYLLEVDKPLVLPINQ 174 Query: 160 PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 V F +TS+ V++S+++P + A G ++PG Y G A G M Sbjct: 175 KVRFLMTSDDVIHSWWVPAFAVKKDANPGFINESWTRIDKPGIYRGQCAELCGKDHGFMP 234 Query: 220 FKAIATPDRAAFDQWVAKAKQ-----------------SPNTMSDMAAFEKLAAPSEYNQ 262 A A FD W+ + KQ S ++ +A + +Q Sbjct: 235 IVVQAL-SEADFDNWLVEQKQLASNAAAAAAASMSKTLSLEELTSQGEQIYIARCAACHQ 293 Query: 263 VEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGME 304 P +F +I + G D M+ Sbjct: 294 PNGAGL--PGVFPSLIGSPIIKGPVEDHLNIVLNGKPGTAMQ 333 >UniRef50_UPI0000510271 cytochrome C oxidase subunit II n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510271 Length = 290 Score = 206 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 94/281 (33%), Gaps = 30/281 (10%) Query: 4 RKYNKSLGWLSLFAGTVLLSGC-----NSALLDP----KGQIGLEQRSLILTAFGLMLIV 54 R + K LG L A LLSGC ++ SL A+ +LIV Sbjct: 11 RSWAKRLGTLGAVAVLALLSGCTKEQVSTGFFPAESKGATNHTEAYTSLWNGAWIALLIV 70 Query: 55 VIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL 114 + + + YR D +S +E + P+++++ + + Sbjct: 71 GLIVWGLILWSMVAYRRRKNDRGLPVQLRYSMPIEILFTVTPVILVLGFFFQSVQVM--- 127 Query: 115 EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI----------------ATVNEIAFPAN 158 IEV + W W F Y Q + + P + Sbjct: 128 -EKTTDDTTPGEQVIEVAAKQWAWDFNYVNQDVYFAGTQVPLDGSEKPGEEAPTLYLPVD 186 Query: 159 TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM 218 T + K+ S V++SF++P + + G LHL A + G Y G A G S M Sbjct: 187 TDLEIKLRSRDVIHSFWVPAFLEKRDMIPGHDQSLHLRAEKEGEYVGKCAELCGEYHSEM 246 Query: 219 KFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSE 259 F +A F+ + N +++ P E Sbjct: 247 LFNVKVV-SKAEFEDYTKSLADEGNKGQLGPEYDRNWYPKE 286 >UniRef50_Q2W5A1 Cytochrome c oxidase subunit 2 n=3 Tax=Magnetospirillum RepID=Q2W5A1_MAGSA Length = 293 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 110/272 (40%), Gaps = 34/272 (12%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCN------SALLDPKGQIGLEQRSLILTAFGLMLIVV 55 R+ + ++L ++ G ++ + SL G+++++ Sbjct: 13 RMNRSTQALMAAAVLIGLAPVAMAGEPQPWALSFQHGVSPTMERITSLATFINGVIVVIT 72 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + + ++RA WSH+ +E V +P +I++ +A+ +++ + ++ Sbjct: 73 LLVSGLLLYACTRFRADRNPK--PATWSHNTPLEVVWTAIPAVILLLIAIPSFRLLYFMD 130 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--------------------IATVNEIAF 155 + +T+++V W W + YP+ + N + Sbjct: 131 RVH-----DADMTLKIVGHQWYWTYEYPDHDFKFDSNMVQAEDLKPGQPRLLTADNTLVV 185 Query: 156 PANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGF 215 PA P+ ++T++ V++S+ +P G + A+ G + NEPGTY G + G Sbjct: 186 PAGVPIRLQMTADDVIHSWSVPAFGIKTDAVPGRLNETWVQVNEPGTYYGQCSQLCGVNH 245 Query: 216 SGMKFKAIATPDRAAFDQWVAKAKQSPNTMSD 247 M A P + F WVA+AK++ + Sbjct: 246 GFMPVHVKAVP-KEEFLAWVAQAKKTYAHLDG 276 >UniRef50_C1ZF25 Cytochrome c oxidase, subunit II n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZF25_PLALI Length = 330 Score = 206 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 105/288 (36%), Gaps = 16/288 (5%) Query: 12 WLSLFAGTVLLSG--CNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 WLS FA + + + + L +P E L + F L + + + + FA KY Sbjct: 2 WLSKFAVSFVPAQLTSSYWLPEPNSTFAPEVDGLFMFIFWLSVFFFVLIVGLGTYFALKY 61 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R P+ SH+ +EA +P +I + W ++ P E + Sbjct: 62 RRVGTTEVVVPSSSHNTALEATWSLIPTALIFVI--FGWGFVGFVDMRTP---PENAYEV 116 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 +V + W W F YP G +++ P + P +TS+ V++S FIP +++ + G Sbjct: 117 QVNAKKWAWNFTYP--GGLQDSDLHLPVDQPTILTMTSDDVIHSLFIPAFRAKMDVVPGR 174 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 +L + G Y G SGM K + ++ +A+ +++ + M Sbjct: 175 YNKLWFHPTKTGENVLFCTEYCGREHSGMNRKVF-VYEEGGVEKKLAEIQETMDKMDPAE 233 Query: 250 ------AFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 + + LF + ++D Sbjct: 234 LGKITFTKSGCMQCHSIDGSKKVGPSFLGLFGTTHDITTGEKITVDEN 281 >UniRef50_D1CCH9 Cytochrome c oxidase, subunit II n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCH9_THET1 Length = 342 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 89/275 (32%), Gaps = 24/275 (8%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 + L L ++ I ++ V FA +YR P +N++E Sbjct: 4 ASNFAGQVDLLFWFITILSALIAIGVFILIVVFATRYRRR-YSGYVPPAIEGNNRLEIAW 62 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 +P +I LA W + P + +TI VV W W G NE Sbjct: 63 IVIPTVI--ALATFAWAAVVYVHMHNP---PKDALTIYVVGRQWMWKAQ-QPTGQWENNE 116 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P PV +TS V++ FF+P + + G T + A +PG YD A Y G Sbjct: 117 LHVPVGKPVKLVMTSQDVIHDFFVPAFRVKQDVIPGRYTTMWFTAEKPGVYDLFCAEYCG 176 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE----------------KLAA 256 S M K A + ++ W++ + ++ + A+ Sbjct: 177 TNHSEMIGKVYAL-SQQDYEAWLSGGSTTASSSGMTGSGGSQASSQSAGQQLYQSLGCAS 235 Query: 257 PSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 N L+ + D Sbjct: 236 CHGQNGEGQIGPRLAGLYGSKVQLSNGQTVVADDA 270 >UniRef50_B7DNN6 Cytochrome c oxidase subunit II n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNN6_9BACL Length = 311 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 96/315 (30%), Positives = 163/315 (51%), Gaps = 10/315 (3%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALL--DPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +++ ++ L + L+GC +L P G E LI+ + L+L+V++P Sbjct: 1 MKRGSRWWRAGLLALAPLTLAGCGQNVLVLHPAGPAAREIDRLIILSVILLLVVIVPVFA 60 Query: 61 MAVGFAWKYRASNKD-AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 + + W+YR + A Y+P W+ S +E + W++P++I+ L T KTT AL ++P Sbjct: 61 LTIYIVWRYRDKPDNRAPYTPQWTESRALEWIWWSIPMVIVGVLGAYTAKTTFAL--TRP 118 Query: 120 LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 + +T++VVS+DWKW F+YP+Q +ATVN P PV F +TS++ +NSF++P+L Sbjct: 119 PESNGNVVTVDVVSLDWKWLFLYPDQHVATVNYCVIPTGVPVQFVLTSDAPINSFWVPQL 178 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 Q Y M GM RL + A++PG Y G A+++G GF+ M F A +AF W + Sbjct: 179 AGQEYTMPGMALRLWVQADQPGNYYGHGANFTGKGFAEMSFTVQA-RSESAFRLWAQGLE 237 Query: 240 QSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSA 299 Q +++ A ++ L P ++ Y N LF V+ + S P + Sbjct: 238 QHAPALTE-AGYQLLKKPGVTGRLSY-GNFPKGLFDQVVWQDGGQYMSGMWGTPTM--GS 293 Query: 300 HEGMEGMDMSHAESA 314 +G G +++ Sbjct: 294 MDGQSGSNLASLGGG 308 >UniRef50_Q39Z27 Cytochrome c oxidase subunit 2 n=4 Tax=Geobacter RepID=Q39Z27_GEOMG Length = 302 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 97/244 (39%), Gaps = 11/244 (4%) Query: 35 QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT 94 + + FG+ L++++ VGF +YR S + + + + +E + Sbjct: 7 TTTRAVDPVFIWIFGVSLVLLLGITATMVGFVIRYRRSR-APEPTSQAASNIWLEIIWTA 65 Query: 95 VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIA 154 +P +I++ + W L + + + + W W F Y T + Sbjct: 66 LPTIIVMAMFYYGWAGYLTLRNV-----PKDALEVTATARMWSWSFTYANGK--TSPTLY 118 Query: 155 FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPG 214 P PV + S V++ F++P + + GM+ + +A++PGTYD + Y G G Sbjct: 119 VPVGKPVLVHLVSEDVIHGFYVPAFRVKHDVVPGMKNHVWFVADKPGTYDLFCSVYCGLG 178 Query: 215 FSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK--LAAPSEYNQVEYFSNVKPD 272 SGM +A P+ A F W+AKA++ N A EK + Sbjct: 179 HSGMVSTVVAVPE-AEFQAWLAKAEKEENQGGGRALLEKNGCLGCHSLDGSRKVGPSFKG 237 Query: 273 LFAD 276 ++ Sbjct: 238 IWGR 241 >UniRef50_Q3JAA7 Cytochrome c oxidase, subunit II n=3 Tax=Bacteria RepID=Q3JAA7_NITOC Length = 352 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 104/310 (33%), Gaps = 29/310 (9%) Query: 2 RLRKYNKSLG--WLSLFAGTVLLS--GCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVV 55 R+R L F G +L GC + L+P G+ + L + ++ Sbjct: 15 RIRSIRHLLRGNISGAFLGASVLGIMGCEGPQSALNPAGRGAEQIAQLFWWLVAVNTLIW 74 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 I + +AV A + + K+ + V I++ LT+ + Sbjct: 75 ILVVGLAVYAA--------QLRPGAHPHRRAKLLIIGGGVIFPILVLTIYLTYGLSLMPA 126 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVM 171 KP + I V W W Y I NEI P V + S V+ Sbjct: 127 LLKPADS--DDLQIAVSGEQWWWRVRYLSSSGGEVIELANEIRLPLGESVNLLLDSPDVI 184 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF 231 +SF++P L ++ + G +RL L A + G Y G+ A Y G + MK + AF Sbjct: 185 HSFWVPSLTGKMDMIPGRISRLTLKATKVGVYHGVCAEYCGSAHALMKLDVVVM-TPDAF 243 Query: 232 DQWVAKAKQSPNTMSDMAA--------FEKLAAPSEYNQVEYFSNVKPDLFADVINKFMA 283 W+A Q A FE +A V PDL + Sbjct: 244 AAWLAAQGQPAAVPQQALAARGQELFQFEGCSACHTIRGTAADGQVGPDLTHVGSRLSLG 303 Query: 284 HGKSMDMTQP 293 G + Sbjct: 304 AGTLPNKPAA 313 >UniRef50_B5ENJ7 COX aromatic rich domain protein n=4 Tax=Acidithiobacillus RepID=B5ENJ7_ACIF5 Length = 321 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 108/310 (34%), Positives = 168/310 (54%), Gaps = 14/310 (4%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNS---ALLDPKGQIGLEQRSLILTAFGLMLIVVIP 57 ++ R K+ ++ A +LLSGC + DPKG + +L G+M +V Sbjct: 3 VKWRNNLKNGCRHAVLAPILLLSGCAGNPFWIFDPKGLMADTNLFYLLVDVGIMGSIVGL 62 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 L+ + F W+Y+ KY P WSHSN +E VVW +PI+ + FL+ T L P Sbjct: 63 TALLVIWFMWRYQKGKNRGKYDPTWSHSNTIEVVVWGIPIIAVGFLSYFAVTGTFELNPY 122 Query: 118 KPLAHDE------KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVM 171 P P+ ++V++ DW+W F+YP+ +A NE+ PA+TPV+F++TS++V Sbjct: 123 NPTVITNHLKPVSDPVEVDVIATDWQWLFVYPQYHMAAANELVLPAHTPVFFRLTSSAVT 182 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF 231 +FFIP+L I M GM+T+ L +N G Y GI++ Y+G G S M FK A F Sbjct: 183 TTFFIPQLVGMIDVMPGMRTKNALESNHVGEYQGIASDYAGAGTSWMTFKTRIVKS-ADF 241 Query: 232 DQWVAKAKQSPNTMSDMAAFEKLAAP--SEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 +WV K +QSP +M+ A+F A P + +++V YFS+V LF V+++ M GK+ Sbjct: 242 REWVRKVQQSPTSMT-YASFNDYADPYINVHHKVAYFSSVPDGLFDHVVDEVM-KGKTWP 299 Query: 290 MTQPEGEHSA 299 + E+ Sbjct: 300 IPPMMTENMV 309 >UniRef50_A7H8L3 Cytochrome c oxidase subunit II n=7 Tax=Cystobacterineae RepID=A7H8L3_ANADF Length = 351 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 98/284 (34%), Gaps = 29/284 (10%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 L + + L +I L A+ F +YR +P+ + Sbjct: 11 LPEQASDYARQVDGLHYFIIATTMIAAAGVFLTAIFFFVRYRRRTGSD-VTPHVAPRGIH 69 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 EA+ VP+ + + W + K + + + V W W F Y G + Sbjct: 70 EALFVGVPLALFLV-----WFAIGFPQYVKLQLPPKDAMDVFVQGKKWMWKFAY-AGGPS 123 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 +++ + PA PV +TS V++SF++P L ++ A+ G T+ A + G Y+ Sbjct: 124 SIDTLRVPAGRPVRLLITSRDVIHSFYVPALRVKMDALPGRYTQTWFQAEKAGRYEIFCT 183 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM-------------------- 248 Y G G S M + + P + FD W+A+ ++ ++ Sbjct: 184 EYCGLGHSAMLGELVVMP-QEEFDVWIAEQRRGAAAVAQDSSPSGERVMPAANIAEEGRR 242 Query: 249 -AAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 A+ + + + DL+ D Sbjct: 243 VASEQGCLKCHSVDGTRHIGPTWVDLYLRQERLKDGKTIVADEA 286 >UniRef50_Q1NHQ5 Cytochrome c oxidase subunit 2 n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHQ5_9SPHN Length = 258 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 97/255 (38%), Positives = 142/255 (55%), Gaps = 2/255 (0%) Query: 30 LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVE 89 ++ G + EQ L +++ V P +L+ A+ YR NKD Y PNW S +E Sbjct: 1 MNHAGPVAAEQWRLYKIVAVVLIFVAGPVLLLVPLIAYHYRLDNKDDAYRPNWGFSWSLE 60 Query: 90 AVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIAT 149 A++W PI I+ L VL W TH L+P + L + P+ ++VV++DWKW FIYP+ GIAT Sbjct: 61 ALIWLPPIAIVAGLGVLLWDATHQLDPYRALPSKQPPLEVQVVALDWKWLFIYPDDGIAT 120 Query: 150 VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 VN++A P PV+ +TS +VM S IP+L QIYAMAGM+T+L+ A+ PG Y G++ Sbjct: 121 VNQLAVPVGRPVHLSLTSGTVMQSLLIPQLAGQIYAMAGMRTQLNFAADRPGVYRGLNTQ 180 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNV 269 ++G GF KF +A PDR + W+ + D + L S + +FS V Sbjct: 181 FNGAGFQHQKFSVVAMPDR-EYRHWLTRRAADGQPFDDNV-LKSLMRKSVAQRPLFFSKV 238 Query: 270 KPDLFADVINKFMAH 284 P LF ++ M Sbjct: 239 PPGLFEHLMMANMQK 253 >UniRef50_A8TIJ6 Cytochrome c oxidase subunit 2 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIJ6_9PROT Length = 283 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 29/251 (11%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 D + L ++ ++ + + + V ++RAS +H Sbjct: 38 QLGFQDGVTPTFHQLNELHNWLLVIITLITVFVLALLVYVCVRFRASRN--PVPSKTTHH 95 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 +E +P++I++ +A+ ++K + + + +TI+V + W W + Y +Q Sbjct: 96 TWLEVAWTGLPVVILVLIAIPSFKLLYYAD-----RAVDPDMTIKVQAHQWYWSYEYLDQ 150 Query: 146 GI--------------------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 + N + P V +TS+ VM+SFF+P G Q+Y+ Sbjct: 151 QVAFDSNLIPEADLKPGQLRLLEVDNRLVVPVGKKVQVLITSSDVMHSFFMPSFGVQLYS 210 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 G ++ G Y G G + M A + AA+D W+ +AK + M Sbjct: 211 TPGRTNETWFQVDKAGVYYGQCNQICGVNHAYMPIVVEAM-EPAAYDAWLVQAK-TKFAM 268 Query: 246 SDMAAFEKLAA 256 D AA +LAA Sbjct: 269 DDSAASPRLAA 279 >UniRef50_C7QBL1 Cytochrome c oxidase subunit 2 n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QBL1_CATAD Length = 287 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 85/261 (32%), Gaps = 28/261 (10%) Query: 17 AGTVLLSGCNSA------LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 70 + +GC++ + P + L ++ L V + + YR Sbjct: 4 LVALTATGCDAGQFKRLGVPQPATKEAPIILHLWQGSWIAALAVGALVWGLILWCVIFYR 63 Query: 71 ASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIE 130 + ++ +E + VP ++I L T K E H + I Sbjct: 64 RKRTGIEIPAQTRYNVPIEVLFTVVPFIMIAVLFFFTAK----DESKLLALHKNPDVKIN 119 Query: 131 VVSMDWKWFFIYPEQGIAT-----------------VNEIAFPANTPVYFKVTSNSVMNS 173 VV W W + Y ++ + + P N V F +TS V++S Sbjct: 120 VVGRQWSWSWNYNYDAVSQQDTPGQLAVYDAGTPADLPVLWLPVNERVRFTLTSTDVIHS 179 Query: 174 FFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 F++P ++ + G L ++ G + G A G S M FK A + Sbjct: 180 FWVPNFLFKLDVVPGRVNEFELTPSKEGEFIGRCAELCGVDHSRMLFKVKVV-SAADYQN 238 Query: 234 WVAKAKQSPNTMSDMAAFEKL 254 + + ++ +L Sbjct: 239 HLKALASKIDPVTGKGQTGQL 259 >UniRef50_A9WMK9 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococcaceae RepID=A9WMK9_RENSM Length = 310 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 102/284 (35%), Gaps = 37/284 (13%) Query: 2 RLRKYNKSLGWLSL----FAGTVLLSGCNSALLDPKGQIGLE-------QRSLILTAFGL 50 + R ++ L++ A ++LS C + + + L + ++ Sbjct: 24 QHRTGSRRARILTVSAVGVASALVLSACTPEMKNGWLPTERDTTNHTGTIIDLWVNSWIA 83 Query: 51 MLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKT 110 L V I + + YR Y S + +E T+P+ +++ T + Sbjct: 84 ALAVGIITWGLIIWCIIAYRRRKDTVGYPRQMSANLPLEVFYLTIPLFMVLVFFYFTDRD 143 Query: 111 THALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIAT--------------------- 149 +++ P + I+V W W F Y + Sbjct: 144 QQSVDARDP----NPQVKIDVRGKQWAWDFNYLAGNDISESVYEATTQTPLNGQPIDKEK 199 Query: 150 VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISAS 209 + + P N V F++ S V++SF++P + + G + L GT+DG A Sbjct: 200 LPTLYLPINQSVEFQLNSRDVIHSFWVPAFLQKRDMIPGKTNYITLTPKALGTFDGKCAE 259 Query: 210 YSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 G S M F+ ++ F +AK KQ+ NT + +++ Sbjct: 260 LCGEYHSEMLFRVKVVTEQ-EFQDHLAKLKQAGNTGTLGNEYDR 302 >UniRef50_UPI0001C164F8 cytochrome C oxidase subunit II, transmembrane region protein n=2 Tax=Nostocaceae RepID=UPI0001C164F8 Length = 338 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 125/342 (36%), Gaps = 59/342 (17%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKG-QIGLEQRSLILTAFGLMLIVVIPAI 59 M++ +L T L G N LL + L + + + + Sbjct: 1 MKIPNSIWTLLIGIALTLTSLWYGQNHGLLPAAAADEAVLIDGLFDAMLTVSIGIFLLVE 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT-------- 111 + + +KYR D + P + +E + +P +I++ ++V ++ Sbjct: 61 GILIYSVFKYRRRAGDNEDGPAIEGNIPLEILWTAIPAVIVLGISVYSFDVYNQIGGLDP 120 Query: 112 ---------------------------------HALEPSKPLA--------HDEKPITIE 130 H + P+ ++ KP+ +E Sbjct: 121 HGGHDAPIMEEARVMPGTAIAATLSDKPVNRSVHHQDSPAPMEIAQAEIASNEAKPLVVE 180 Query: 131 VVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 V ++ + W F YP+ GI T EI P V K+T+N V+++F++P + + G + Sbjct: 181 VSALQYAWIFTYPDAGITT-GEIHVPVGQQVQMKMTANDVIHAFWVPEFRLKQDVIPGRE 239 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA-KQSPNTMSDMA 249 TR+ + GTY + A GP M+ + I +A FD WV + T++ Sbjct: 240 TRVRFTPKKEGTYTVVCAELCGPYHGAMQTQVIVESKQA-FDAWVQEQLLAEKETINQAI 298 Query: 250 AFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 A PS + E+ + + + + + GK + + Sbjct: 299 ALN----PSAMSADEFLAPYMQKM--HIHPETLGIGKVLLES 334 >UniRef50_Q0AMG7 Cytochrome c oxidase subunit 2 n=2 Tax=Hyphomonadaceae RepID=Q0AMG7_MARMM Length = 292 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 99/287 (34%), Gaps = 34/287 (11%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGC----NSALLDPKGQIGLEQRSLILTAFG-LMLIVV 55 MR +L W + AG G I ++ ++ Sbjct: 9 MRFLTAL-ALTWTTFAAGAFATPGQPTDGALGFQPAVTPIMERITWFHDILLLPMITVIT 67 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + + V +++ SH+ +E V VP+L++I +A+ ++ + + Sbjct: 68 LVVMGLLVFVMFRFNRK--ANPTPSKNSHNTLLEVVWTAVPVLLLIVIAIPSFPLLYMQD 125 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQ---------------------GIATVNEIA 154 P E T++ W W + YP+ ++ + Sbjct: 126 ELPP----EIDFTLKATGNQWNWSYEYPDHEVAEYFSNMIEEEDLQPGQLRNLSVDYPLV 181 Query: 155 FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPG 214 P + V VT+ V++++ +P G+++ A+ G A + G Y G + G Sbjct: 182 VPVDATVRVLVTATDVIHNWAMPAFGTKMDAIPGRINEAWFQATQEGVYYGQCSELCGLR 241 Query: 215 FSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYN 261 + M + P + FD W+A + + + A + A E Sbjct: 242 HAFMPIEVHVVP-QDVFDAWIAAKAEDEYSEAADAIIAEYTAARETR 287 >UniRef50_Q1V0P2 Cytochrome c oxidase subunit 2 n=2 Tax=Candidatus Pelagibacter ubique RepID=Q1V0P2_PELUB Length = 271 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 98/253 (38%), Gaps = 30/253 (11%) Query: 26 NSALLDPKGQIGLEQRSLIL-TAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 D Q E S +++ + + + + + ++RAS +H Sbjct: 26 QLGFQDSASQSMTEIVSFHNNILLPVIIAISVFVLFLMIYVCIRFRASKNPN--PSKTTH 83 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 + VE + +P LI+I +AV ++K + + + +TI+ V W W + YP+ Sbjct: 84 NVAVEVLWTLIPCLILIVMAVPSFKILYKQD-----TIPKADLTIKAVGYQWYWGYEYPD 138 Query: 145 QGI--------------------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 + I NE+ P N V +T+N V++++ +P G + Sbjct: 139 ENIIFESYMIKEAELKENQPRLLTVDNEVIVPVNKVVKVLITANDVLHAWALPSFGVKRD 198 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS-PN 243 A+ G A + GTY G + G + M D + W+A+AK Sbjct: 199 AVPGRINETWFKAEKVGTYYGQCSELCGIEHAFMPITVKVVTD-EEYAIWLAEAKMKFAK 257 Query: 244 TMSDMAAFEKLAA 256 + ++K+A+ Sbjct: 258 EPIAVNEYKKIAS 270 >UniRef50_Q72B26 Cytochrome c oxidase subunit 2 n=6 Tax=Desulfovibrionales RepID=Q72B26_DESVH Length = 426 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 84/239 (35%), Gaps = 10/239 (4%) Query: 38 LEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI 97 + FG+ I+++ + F W+Y + S E +P Sbjct: 10 QQVDLAFYVIFGVSAIMLLGITATMLWFVWRYDHRRN--PVATEIPGSVLAETAWTLIPT 67 Query: 98 LIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPA 157 LI++ L W AL + + V + W W F YP ++V + PA Sbjct: 68 LIVMALFYYGWAGYKAL-----RTVPADALEVGVKARMWSWIFEYPNGKRSSV--LYVPA 120 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 PV +TS V++S +IP ++ + GMQT + PG +D + A Y G + Sbjct: 121 GKPVKLDMTSVDVIHSLYIPAFRIKMDTVPGMQTYAWFKTDGPGEFDILCAEYCGLKHAN 180 Query: 218 MKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD 276 M A + F +W+ ++ + + + L+ Sbjct: 181 MLSVVKAV-EPDEFRKWLESSEAPGGKGRALLDAYGCISCHSLDGSPGPGTTFKGLYGA 238 >UniRef50_Q0VNA0 Cytochrome c oxidase subunit 2 n=2 Tax=Alcanivorax RepID=Q0VNA0_ALCBS Length = 402 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 103/324 (31%), Gaps = 64/324 (19%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLD--PKGQIG-LEQRSLILTAFGLMLIVVIPAI 59 + L L + T + LD P + + L T ++ ++ + Sbjct: 6 FHRAAVGLTSLMISGMTFASDWTERSDLDLRPGVTQASQDVQDLHTTVLWIVTVIGLMVC 65 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 + + ++R S + + E + +P +I+I +AV + L+ Sbjct: 66 GLILFSMIRHRRSKNPN--PSTFHENVFFEVLWTVIPFVILIAMAVPATRVLVQLD---- 119 Query: 120 LAHDEKPITIEVVSMDWKWFFIYP------------------------------------ 143 E +T++V WKW + Y Sbjct: 120 -DTAESELTVKVTGYRWKWSYEYLTYEDDNDIGVSFFSNLATPPEQYNNPVLSGGLFPYG 178 Query: 144 ---------------EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 + N++ P+ V F VTS+ V++SF++P G + A+ G Sbjct: 179 TAKELVGKEAPEKDHNYNLEVDNKLLIPSGQKVRFLVTSDDVIHSFWVPDFGGKKDAIPG 238 Query: 189 MQTRLH-LIAN-EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 L+ + GTY G A G + M + F W+A+ K+ + Sbjct: 239 FVNETWALVPEGKEGTYYGQCAELCGKNHAFMPIAVEVV-TQDEFKAWIAEEKEKAASGP 297 Query: 247 DMAAFEKLAAPSEYNQVEYFSNVK 270 D+ F + E + Y Sbjct: 298 DLTPFADIDQAMEEGKQVYAGACA 321 >UniRef50_Q7USM3 Cytochrome-c oxidase chain II/c n=1 Tax=Rhodopirellula baltica RepID=Q7USM3_RHOBA Length = 368 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 96/271 (35%), Gaps = 22/271 (8%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 + + LD G L ++ + + +AV + Sbjct: 62 AQSQSALDHAGVGAESIAELFWVMLIGGTLIWLIVVGLAVYAMVV---------PGEHDQ 112 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 ++ + I+ A+LT+ E +P E +EV + W W Y Sbjct: 113 KKTRMLVIGGGAVFPTIVLTALLTYGLAMLPELQRP--APEGSQVVEVSGVRWWWRVNYR 170 Query: 144 ---EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 + I T NEI P N PV FK+ S V+++F+IP LG ++ M G + RL L Sbjct: 171 MPDGKKIETANEIHLPVNEPVEFKLKSEDVIHAFWIPSLGGKVDMMPGRENRLKLHPTRV 230 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA-------AFEK 253 G + G+ A Y G + M F I R FD W+ + + SD+A Sbjct: 231 GVFRGVCAEYCGEAHTQMAFDVI-VQSREEFDAWLHQQALPAVSGSDVAEAGREVFEAAG 289 Query: 254 LAAPSEYNQVEYFSNVKPDLFADVINKFMAH 284 A V PDL + + Sbjct: 290 CGACHAIRGTSADGVVGPDLTHFGSRRSIGA 320 >UniRef50_B6IXF5 Cytochrome c oxidase subunit 2 n=6 Tax=Alphaproteobacteria RepID=B6IXF5_RHOCS Length = 285 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 42/271 (15%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSG-------------CNSALLDPKGQIGLEQRSLILTA 47 M +RK L L + + L + + S Sbjct: 1 MSVRKIGAGLSGLLMTLAVGAWTALAQAPSPVGVPQPGGLGLQQAASPVKQQLDSFHDLL 60 Query: 48 FGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLT 107 ++ + + + + + W++RAS SH+ +E +P++I++ +A+ + Sbjct: 61 LVIITAITLLVLALLIYVMWRFRASKN--PVPSRTSHNTVLEVAWTVIPVVILVVIAIPS 118 Query: 108 WKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--------------------- 146 ++ + ++ + E +T++V W W + YP+ G Sbjct: 119 FQLLYFMDRT-----PEADMTVKVTGRQWYWSYEYPDHGNIAFDSFMLSEDEVPDPKLRL 173 Query: 147 IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 + N + P V VT++ V++S+ IP LG + A+ G A+ G + G Sbjct: 174 LEVDNRLVVPVGANVRVLVTASDVIHSWAIPSLGIKKDAVPGRLNETWFRADAEGVFYGQ 233 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 + G M A + FD WVA+ Sbjct: 234 CSEICGTNHGFMPIAVEAV-SKERFDAWVAE 263 >UniRef50_A6WD34 Cytochrome c oxidase subunit 2 n=4 Tax=Actinomycetales RepID=A6WD34_KINRD Length = 324 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 102/300 (34%), Gaps = 42/300 (14%) Query: 2 RLRKYNKSLGWLSLFAGTVL-LSGCNSALLDP-------------KGQIGLEQRSLILTA 47 R R+ K+L +L + L+GC D L + Sbjct: 15 RRRRPPKALLAGALTGVATMALTGCAGDWPDASASNFFLPDASIGATNQTERISVLWDGS 74 Query: 48 FGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLT 107 + L+V + + + YR D + ++ +E + VP++++ L T Sbjct: 75 WIAALVVGVLVWALTIWCVVAYRRRKSDPELPAQVRYNMPIEILYTIVPVMMVGVLFYYT 134 Query: 108 WKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA------------------- 148 + + + +TIEVV W W F Y ++ Sbjct: 135 AR----DQQAITDTSQTPDVTIEVVGKKWSWDFNYLDENGQPGVYDTGRQADLTGVPAPE 190 Query: 149 -TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 + + P + V F + + V +SF++P ++ +AG + + GT+ G Sbjct: 191 LELPTLYLPVDQRVQFDLYARDVNHSFWVPAFLMKMDLIAGSPNHFQVTPTKEGTFLGEC 250 Query: 208 ASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFS 267 A G S M F +A + Q + + + T S LA E QVE S Sbjct: 251 AELCGEYHSEMLFNVKVV-SQAEYQQHLDDLQAAGQTGSLPTT---LAGAEEMAQVEADS 306 >UniRef50_D2PZ51 Cytochrome c oxidase, subunit II n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZ51_9ACTO Length = 299 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 96/269 (35%), Gaps = 27/269 (10%) Query: 10 LGWLSLFAGTVLLSGCNS---------ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 L ++ T++L+GC++ L + RSL + A+ LI+ + Sbjct: 30 LVAAAVVVSTLVLTGCSAETNAQWKRLGLPEGASDRTEAVRSLWIGAWIAALIIGVMVWG 89 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 + + +YR ++DA ++ +E + P +I L T + Sbjct: 90 LILFAVVRYRRRSEDA--PRQTRYNLPLEVLYTLAPFAVIGVLFFYTVE----NGNKVTA 143 Query: 121 AHDEKPITIEVVSMDWKWFFIYPE-----------QGIATVNEIAFPANTPVYFKVTSNS 169 D TI VV W+W F Y E + E+ P N V F++TS Sbjct: 144 MSDSPAHTINVVGQQWQWTFNYKETVDGQEGVWETGTLEEPAELVLPVNESVKFELTSPD 203 Query: 170 VMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRA 229 V++SF++P ++ + G L + GT+ G A G S M F Sbjct: 204 VIHSFWVPAFYFKLDVIPGRPNNFELTPTKTGTFAGKCAELCGLYHSRMVFTVRVV-TAE 262 Query: 230 AFDQWVAKAKQSPNTMSDMAAFEKLAAPS 258 + + + T + + P Sbjct: 263 EYQAHLRELAAKGQTGAATGGEDATTIPG 291 >UniRef50_C1SI89 Cytochrome c oxidase subunit 2 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SI89_9BACT Length = 402 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 94/241 (39%), Gaps = 13/241 (5%) Query: 39 EQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPIL 98 + FG+ ++I L+AV F +KY + + + E +P L Sbjct: 7 RVDTAFQFIFGISFAIMILITLVAVFFLFKYHHTKHPD--ASEIDGNVAAELTWTIIPTL 64 Query: 99 IIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPAN 158 I++ + W AL + + ++V + W W F YP T E+ PAN Sbjct: 65 IVLAMFWFGWSGYKAL-----RSAPADSMEVQVTARMWSWKFEYPNGK--TSKELYVPAN 117 Query: 159 TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM 218 PV +TS V++SF++P ++ + GM T + A EP YD + A Y G + M Sbjct: 118 KPVKLNMTSLDVIHSFYVPAYRVKMDTVPGMNTYVWFNAGEPAQYDILCAEYCGVRHAFM 177 Query: 219 KFKAIATPDRAAFDQWVAKAKQS---PNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFA 275 K + P+ ++ W+A +Q + + E D++ Sbjct: 178 LSKVVVLPE-EEYELWLASDEQPSTDKPEAVAILEKHGCIDCHSLDGTELVGPTFKDIYG 236 Query: 276 D 276 Sbjct: 237 R 237 >UniRef50_Q3A1J0 Cytochrome c oxidase subunit 2 n=2 Tax=Desulfuromonadales RepID=Q3A1J0_PELCD Length = 318 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 98/258 (37%), Gaps = 10/258 (3%) Query: 35 QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT 94 + L FG+ LI+++ + V FA ++ S + S +E Sbjct: 7 DTAEAVDKVFLYIFGISLILLVLITGVMVAFAIRFHRSRQPQPKE-IPSSCLWLEITWTL 65 Query: 95 VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIA 154 +P LI++ + W+ +L P + ++ V+ W W F+YP G T E+ Sbjct: 66 IPTLIVLSMFWYGWQGYLSLTNVPP-----DALPVKAVARQWSWSFVYP--GGRTSPELV 118 Query: 155 FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPG 214 PA PV + S V++S +IP + A+ GM T + A E GT+D Y G Sbjct: 119 VPAGRPVRIAIVSEDVLHSLYIPAFRIKKDAVPGMTTHVWFRAPETGTFDLFCTEYCGLA 178 Query: 215 FSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLF 274 + M AF W+ K + E+ + ++ V P Sbjct: 179 HASMITSVEVL-SPDAFADWLQKPQPEAGLAKGRQLLEQY-GCLACHSLDDSPRVGPSFA 236 Query: 275 ADVINKFMAHGKSMDMTQ 292 V + A + D +Q Sbjct: 237 QLVEGQKRAFAQPPDTSQ 254 >UniRef50_C5D863 Cytochrome c oxidase subunit 2 n=87 Tax=cellular organisms RepID=C5D863_GEOSW Length = 356 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 26/296 (8%) Query: 3 LRKYNKSLGWLSLFA-GTVLLSGCNSALL---DPKGQIGLEQRSLILTAFGLMLIVVIPA 58 ++K+ + SLF+ +LL+GC L P G+ Q SL+L + +ML+V++ Sbjct: 1 MKKWLHNWRLFSLFSMIALLLAGCGKPFLSTLQPAGEAADMQFSLMLLSTAIMLLVIVVV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFL-AVLTWKTTHALEPS 117 ++ V ++R + P N +VWTV +I++ + AV T K T L Sbjct: 61 TIIFVYVVIRFRQRKGEENKIPKQVEGNHTLEIVWTVIPIILLIILAVPTVKATFDLADV 120 Query: 118 KPLAH---DEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSF 174 KP+ D+ + + V + + W F YP+ G+ T ++ P + VYF + ++ V +SF Sbjct: 121 KPMNKEKRDKDTLVVNVRASLYWWEFEYPDYGVITSQDLVVPTDERVYFNLKASDVKHSF 180 Query: 175 FIPRLGSQIYAMAGMQTRLHLIAN-----EPG-TYDGISASYSGPGFSGMKFKAIATPDR 228 +IP +G +I + + L + + G + G A GP + M FK A P R Sbjct: 181 WIPAVGGKIDTNIENKNQFWLEFDQERAEKAGNIFYGKCAELCGPSHALMDFKVKAVP-R 239 Query: 229 AAFDQWVAKAKQSPNTMSDMAAFEK--------LAAPSEYNQV---EYFSNVKPDL 273 FDQW+ K K + + ++ + + P+L Sbjct: 240 EEFDQWIEKMKNAKKPVVTDPVAKQGEEIFNKSCIGCHAVTPIDKRPEQARTAPNL 295 >UniRef50_C6IYM5 Quinol oxidase subunit II n=2 Tax=Bacillales RepID=C6IYM5_9BACL Length = 318 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 95/299 (31%), Positives = 154/299 (51%), Gaps = 9/299 (3%) Query: 23 SGCNS-ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY-SP 80 +GCN +LDPKG + Q +I+ + M +++ + + KYRAS Y P Sbjct: 19 TGCNQLTVLDPKGPVAKTQSQVIIFSIVTMAFILLVVYTLYIYMLTKYRASKAAPDYEPP 78 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 + S +E T+PI+I+ L+V+T ++T A+E D+KP+ I S +WKW F Sbjct: 79 HVEGSKWLEITWITIPIIIVAVLSVVTVRSTSAVEKVPKGYEDQKPLVIYAASSNWKWHF 138 Query: 141 IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 YPE+GI TVN + FP N PV F++ S + SF+IP+L Q YAM+ M L+++A Sbjct: 139 SYPEEGIETVNYVNFPTNRPVEFRLYSYGPITSFWIPQLAGQKYAMSDMVNTLNIVAEHE 198 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEY 260 G+Y G ++++SG GF+ M+F+A+A + +D+WV + K + +++ + L Sbjct: 199 GSYMGKNSNFSGEGFAHMEFEALAMA-PSEYDKWVKEVKDTAPELTESEFDKLLETAHVG 257 Query: 261 NQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEH--SAHEGM--EGMDMSHAESAH 315 Q +S+ D + H + E +H H M MDM+ S H Sbjct: 258 RQT--YSSTHLDFRPAPEGENAGHNHGGENGSEEMDHSTMDHSTMDHSDMDMTEESSGH 314 >UniRef50_Q11EK7 Cytochrome c oxidase, subunit II n=3 Tax=Rhizobiales RepID=Q11EK7_MESSB Length = 330 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 117/301 (38%), Gaps = 31/301 (10%) Query: 7 NKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 + G + L + LSGC+ + L P G L L TA G+ + V + +++ Sbjct: 2 RRGAGRVVLLSIASALSGCSGVQSALSPSGVEALRIDPLFWTATGVSVAVTLMVVVLMAL 61 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVW----TVPILIIIFLAVLTWKTTHALEPSKPL 120 + P W + V+ +PI+++ L + ++ Sbjct: 62 ALY----------GPPRWRSWLGGDRVIIGGGVVLPIVVLTGLFIYG---LFVMQAGAVR 108 Query: 121 AHDEKPITIEVVSMDWKWFFIYP---EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP 177 + E T+ ++ W W +Y + I + NE+ PA PV ++ S++V++SF+ P Sbjct: 109 SAREGEATVTIIGKLWWWEVVYQGPDGEEIVSANELRLPAGRPVRLRLESDNVIHSFWAP 168 Query: 178 RLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA- 236 ++ ++ + G + + A PG G A Y G + M F +A +D W+A Sbjct: 169 QIAGKLDMIPGRTNEVVVEATAPGISRGQCAEYCGGAHALMAFYVVAMA-PDEYDAWLAR 227 Query: 237 KAKQSPNTMSDMAA-------FEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 +A +P +++ A + E + PDL +A G + Sbjct: 228 EAGPAPEPLTEGEARGRQVFLENGCGGCHQVRGTEARGRIGPDLTHVGSRMSLAAGMMPN 287 Query: 290 M 290 Sbjct: 288 D 288 >UniRef50_Q057E8 Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057E8_BUCCC Length = 292 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 128/252 (50%), Positives = 162/252 (64%), Gaps = 1/252 (0%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 G I + L+L F +M I+V P +++ + YR SN KY+PNW HS +E + Sbjct: 37 SGYISKLEFELMLLVFKIMFIIVFPVLMLVFFIVYYYRHSNTSEKYTPNWKHSYFLEIIC 96 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHD-EKPITIEVVSMDWKWFFIYPEQGIATVN 151 W +PI II FLA L+W TTH+LEPSK L + KPITIEVVS++W+W FIYP IAT+N Sbjct: 97 WLIPIFIISFLAFLSWNTTHSLEPSKKLKVNINKPITIEVVSLNWRWLFIYPYYKIATIN 156 Query: 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYS 211 EI+FP N PV FK+TSNSVMNSFFIP LGSQIY MAGM+T L+LIA G Y GIS++YS Sbjct: 157 EISFPKNVPVNFKITSNSVMNSFFIPNLGSQIYTMAGMKTELNLIALSNGIYKGISSNYS 216 Query: 212 GPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 G GFS MKFK D F++W+ K K +S F L+ S+ + EYFS P Sbjct: 217 GNGFSNMKFKVYVQNDLFHFNKWIKKVKSKKKFLSFKKQFLNLSKNSKKYKNEYFSYTDP 276 Query: 272 DLFADVINKFMA 283 LF +I F + Sbjct: 277 LLFYKIIKIFNS 288 >UniRef50_D0KXM7 Cytochrome c oxidase subunit 2 n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXM7_HALNC Length = 377 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 104/271 (38%), Gaps = 39/271 (14%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQ--RSLILTAFGLMLIVVIPA 58 M R G L+ + + + P G Q L + F + +++ I Sbjct: 1 MATRLILIVTGLLAPLSSVMAAQEDPLSFNMPVGVTTTSQTAYDLHMLVFWVCVVIGIGV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 + ++R S + + + VE + VP LI+I +AV K A Sbjct: 61 FSVMAWSLVRHRRSRGA--VASQFHENTAVEVIWTLVPALILIAIAVPATKAIIAANAQP 118 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQGIA------------------------------ 148 + I+V+ WKW + YP +GI+ Sbjct: 119 AT----PDVVIDVLGSQWKWEYKYPREGISFFSNLASPSRDASQLGAKESPANVPYYLLN 174 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 + + P V +VTS+ V++S+++P+LG + A+ G ++ + ++PGTY G A Sbjct: 175 VDHPMVVPVGKTVQVQVTSSDVIHSWWVPQLGFKTDAIPGKVNKMSFVIDKPGTYRGQCA 234 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G G + M A AA+ +W+ K K Sbjct: 235 ELCGAGHAFMPIVVEAMM-PAAYAEWMNKEK 264 >UniRef50_B4WPA2 Cytochrome c oxidase subunit 2 n=2 Tax=Cyanobacteria RepID=B4WPA2_9SYNE Length = 332 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 30/298 (10%) Query: 2 RLRKYNKSLGWLSLFAGTVLLS---GCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 R+ + LG SL AG +S G + L + L + + I Sbjct: 20 RVLNRRRILGLASLAAGNFAISVWMGQEAYKWLPPQASSEAVLVDKLFSFMTAVGTFIFI 79 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL-- 114 + + RA+ D P + K+E + VPI++II++ +++KT + Sbjct: 80 GVVGTLLYSMIFQRAAKYDNSDGPPIEGNVKLEVIWTAVPIMLIIWIGTVSYKTYDQMSI 139 Query: 115 -----------------EPSKPLAHD----EKPITIEVVSMDWKWFFIYPEQGIATVNEI 153 EP KP+ D + P IEV S W W F YP+Q +++ E+ Sbjct: 140 LGTIAPKVMATVDTVPGEPRKPVPGDISPTDNPAPIEVHSRQWSWEFYYPDQNVSST-EL 198 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 P N FK+TS+ V++ F++P + + G + L G Y + YSG Sbjct: 199 HLPLNQRARFKLTSDDVLHGFYVPAFRVKQDIVPGKEIDFALTPIRAGRYRLRDSEYSGT 258 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 F+ + + QW+ Q+P ++ A+E+ + + ++ VKP Sbjct: 259 YFASNQTNV-VVESEEEYQQWLGAIAQNPPQAAENIAYEEFSQAEQGTISLGWATVKP 315 >UniRef50_C7NIK2 Cytochrome c oxidase subunit 2 n=3 Tax=Micrococcineae RepID=C7NIK2_KYTSD Length = 304 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 101/287 (35%), Gaps = 30/287 (10%) Query: 2 RLRKYNKSLGWLSLFA-GTVLLSGCNSALLDPKG-------QIGLEQRSLILTAFGLMLI 53 R++ + G ++LS C S+ +G + + + + L Sbjct: 7 NTRRWQRPAVLAGAATLGALVLSACGSSDQIARGYLPEGVTENSDGVTTFWVGMWIAALA 66 Query: 54 VVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHA 113 V + + YR D++ ++ +E + VPI+++ L V K Sbjct: 67 VGVLVWGLTAWCIVAYRR-KDDSELPKQVRYNMPIEILYTVVPIVMVAGLFVQNVKL--- 122 Query: 114 LEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV----------------NEIAFPA 157 E ++E + V W W F Y + + P Sbjct: 123 -ENDLMDLNEEPENIVHVAGKQWSWDFNYLSDDVHESGQQAVLTGEEGVAEGLPTLYLPV 181 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 N F +T+ V++SF++P+ ++ + G+ R + E GTY G A G S Sbjct: 182 NERTEFVLTARDVIHSFWVPQFLQKLDMIPGVVNRFQVTPTEVGTYQGKCAELCGAYHSE 241 Query: 218 MKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVE 264 M F+ +R +D+ + + + + +++ N VE Sbjct: 242 MLFQVKVV-ERDEYDKQMQALEDAGKSGFLDTGYDRKELVHGENDVE 287 >UniRef50_A6GFM7 Cytochrome c oxidase subunit 2 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFM7_9DELT Length = 339 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 90/274 (32%), Gaps = 21/274 (7%) Query: 17 AGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA 76 GT +S LL L + + I + I F WKY+ ++D Sbjct: 11 LGTPPMSDSPWELLPTASNHAQSLDGLYILLTAVTGISFVLVIGTMFYFMWKYKMKSEDD 70 Query: 77 KYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 K SP +H+ K+E +P + ++ V L+ K + I I V W Sbjct: 71 KTSP-LTHNGKLEFAWSAIPAIFLMVFFV-----WGELDFVKLSSPPADSIDIHVTGQKW 124 Query: 137 KWFFIYPE---------QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMA 187 W F YP + + P V +TS V++SF+IP + + Sbjct: 125 YWTFEYPGRPVAATTEVEDGEIAPLLVVPKGQAVRLTMTSKDVIHSFYIPAFRVKKDVVP 184 Query: 188 GMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA----KQSPN 243 G T + A E G + Y G S M + + VA A + Sbjct: 185 GRYTYVWFEATELGDFPVFCTEYCGDEHSSMLAVVRVV-EPEDYKAEVAAATTLEQGEGE 243 Query: 244 TMSDMAAFEKLA-APSEYNQVEYFSNVKPDLFAD 276 ++ A A + + + V P Sbjct: 244 SLEQFGEKVYKAFACNSCHNTDATRKVGPGFGGL 277 >UniRef50_Q7NIL9 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobacter violaceus RepID=Q7NIL9_GLOVI Length = 308 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 104/283 (36%), Gaps = 30/283 (10%) Query: 1 MRLRKYNKSLGWLS----LFAGTVLLSGCNSALLDP--KGQIGLEQRSLILTAFGLMLIV 54 MR+ + + L L + +G L P + + L + + Sbjct: 1 MRIPRITPNTSLLVVSTVLIVIASVWAGQTVGWLMPVEASKEAGQIDGLFRFMLIIATGI 60 Query: 55 VIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL 114 + + + A+ ++ + D PN + ++E + +P ++++L++ +++ + Sbjct: 61 FLGVQGVLLYSAFVFKRAKDDMGDGPNMHGNLRLEILWTAIPTALVLYLSIYSFEVFQLM 120 Query: 115 ---------------------EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEI 153 + + P P+ I V ++ + W F YP V+E+ Sbjct: 121 GASSPMGGGAHHEDSGLPIRFQATNPDPAAPPPLIIAVEAVQYAWIFSYPGSE-TQVSEL 179 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 P PV + SN V+++F++P + + G T++ + G Y A G Sbjct: 180 HLPIGRPVRMDMKSNDVIHAFWVPEFRLKQDVIPGRTTQVSFTPTKAGKYQLRCAELCGA 239 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 GM I D+ D W+ S T + +A AA Sbjct: 240 YHGGMVVDVIVE-DKKDVDAWLKSQ-ASLGTSTRVAQLADPAA 280 >UniRef50_Q01R98 Cytochrome c oxidase, subunit II n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R98_SOLUE Length = 322 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 104/312 (33%), Gaps = 29/312 (9%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 N ++ G R L + L+ I+ + + +A+ + + + S Sbjct: 2 NQSMWHASGPNAAYVRELGIFFGLLLGIIFVIVVGLALFSLRRRHRGIEQEALEGSHQAS 61 Query: 86 ----NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFI 141 ++ VV L + L LT + + A + IEV W W Sbjct: 62 ERTDGRLRMVVGIATALTVSILFGLTIVSVSVGKSISASAAPANSLLIEVTGAQWWWKIR 121 Query: 142 YPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197 Y I T NEI P PV + T++ V++SF++P L + + G T + A Sbjct: 122 YANDDPSRIIETANEIHIPTGRPVAIRGTADDVIHSFWVPSLQGKRDLIPGRTTLEWMQA 181 Query: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE----- 252 ++PG Y G A + G + M F IA P + F+ W+ Q +D Sbjct: 182 DQPGEYRGQCAEFCGLQHAHMAFWVIAEPPQ-QFNHWMDHQLQPAIEPADEDTKRGKEIF 240 Query: 253 ---KLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM------------DMTQPEGEH 297 + + PDL K +A G G H Sbjct: 241 LQSACILCHAIRGTDASAQAGPDLTHFGSRKTIAAGTLPNSKGNLAGWIADPQNIKPGTH 300 Query: 298 SAHEGMEGMDMS 309 A + +M Sbjct: 301 MATVPIRPAEMQ 312 >UniRef50_B2JRY1 Cytochrome c oxidase, subunit II n=2 Tax=Burkholderia RepID=B2JRY1_BURP8 Length = 354 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 95/284 (33%), Gaps = 22/284 (7%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 + L+P G L + V +L + + S+ P Sbjct: 37 QQSALEPAGIQAERILDLWNLTLIVCGAVFAAVLLAMFIALLRAQRSDAATAPEPMPDDR 96 Query: 86 -----NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 + +V + +++ L V + + P+ IE+ W W Sbjct: 97 AERRTRRGVIAASSVSVALLVGLVV----ADVLTDRALSKLPVANPVRIELTGQQWWWQA 152 Query: 141 IYPEQ----GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 +YP G T NE+ PA PV + + V+++F++P L + + G+ + + Sbjct: 153 VYPSDSGQPGFTTANELHVPAGRPVVVALKAGDVIHTFWVPNLHGKKDMLPGIASTIEFR 212 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK--- 253 A++PG Y G A Y G + M +A A + W + + +D A Sbjct: 213 ADKPGVYRGQCAEYCGAEHALMAMLVVAE-SPAQYGAWREHQAGAAVSSADALAQRGRQV 271 Query: 254 -----LAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ 292 A + PDL + + +A G + Sbjct: 272 FERSTCAGCHTVRGTAAQGTLGPDLTHLMSRQTIAAGMFANTQA 315 >UniRef50_B6IRX5 Cytochrome c oxidase subunit 2 n=1 Tax=Rhodospirillum centenum SW RepID=B6IRX5_RHOCS Length = 336 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 103/297 (34%), Gaps = 37/297 (12%) Query: 2 RLRKYNKSLGWLSLFAGTVLLS---GCNSALLD----PKGQIGLEQRSLILTAFGLMLIV 54 R+ +L +G L G P + G+M+++ Sbjct: 5 PKRRTGVPFALAALLSGGALAQEPLGQPVDWQMWHQVPATPVMQRLEDFHWMLLGIMVLI 64 Query: 55 VIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL 114 + + + ++ SH+ +E +P++I+I +A+ ++++ + + Sbjct: 65 CLLVVALLAYVVVRFNEKRNPT--PSRTSHNTVLEVAWTVIPVVILIAIAIPSFQSLYYM 122 Query: 115 EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG---------------------IATVNEI 153 + + +TI++ W W F YP+ G + N Sbjct: 123 D----REPAQVDMTIKITGRQWYWDFEYPDHGGVQFSSFIVTDDDLPEGGLRLLEVDNRA 178 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 P + +T+ V++S +P L + A+ G + + PG Y G + G Sbjct: 179 VVPVGANIRLLITAGDVLHSVAMPSLAIKRDAIPGRLNESWMRIDRPGVYRGQCSEICGT 238 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAKQSP--NTMSDMAAFEKLAAPSEYNQVEYFSN 268 + M A + F WV + + M+ AF LAAPSE E + Sbjct: 239 NHAFMPMVIEAV-EPERFAAWVNERRAEAGLEPMTVQVAFAPLAAPSEAPPSEDAPS 294 >UniRef50_B0UJY9 Cytochrome c oxidase, subunit II n=6 Tax=Rhizobiales RepID=B0UJY9_METS4 Length = 338 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 98/275 (35%), Gaps = 16/275 (5%) Query: 27 SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSN 86 + LDP + L ++ + + + +A+ +++ R + + + Sbjct: 26 QSPLDPVSPQARDLLWLFWLFSAVLAAIWLAVM-LALLASFRARRAETADPLAIDPRRER 84 Query: 87 KVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY---- 142 + A+V + + L VL + + +TI V+ W W Y Sbjct: 85 RATALVAGLTVA--TGLVVLVLTGLSYAGQRRLFGDEAARVTIRVIGHQWWWEVQYEDPE 142 Query: 143 PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 P +G T NEI P PV + S V++SF++P L + + G +H A PG Sbjct: 143 PSRGFTTANEIHVPVGVPVRLTLDSTDVIHSFWVPSLTGKQDLIPGRTNAIHFTAERPGL 202 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS-PNTMSDMAAFEK-------L 254 Y G A + G + M IA D +FD+W P SD A + Sbjct: 203 YRGQCAEFCGMQHAKMGLLVIAE-DEESFDRWRRGQAAPRPEPGSDEARAGEAAFVAAPC 261 Query: 255 AAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD 289 + + P+L + +A G Sbjct: 262 SLCHQVRGTAAAGRNGPELTHVGSRRTLAAGTLPM 296 >UniRef50_A4A0M8 Cytochrome c oxidase subunit 2 n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0M8_9PLAN Length = 325 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 97/289 (33%), Gaps = 27/289 (9%) Query: 21 LLSGCNSALL--DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY 78 +L+ + L L + + + + + V F KY Sbjct: 1 MLADADGGLFFGPANSTFAPMVDDLFDLIYWISAFFFVLIVGVMVYFVLKYYRRPG-HGP 59 Query: 79 SPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKW 138 P+ +H+N +E +P +++ V+ + ++ + I V + W W Sbjct: 60 QPSPTHNNTLEIAWSVLPSFLLVVFFVMGFTNYMSM-----RTPPDDAYEIHVQAKKWSW 114 Query: 139 FFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA- 197 F+YP A +++ P PV F + S V+++ F+P +++ + G + + A Sbjct: 115 LFVYP--NGAESSDLHIPVGRPVRFILESEDVLHNMFVPAFRTKMDCVPGRYNEIWVQAV 172 Query: 198 NEPGT---------YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ--SPNTMS 246 N GT +D A Y G S M + FD W+ KA NTM Sbjct: 173 NTTGTGVNPDDHKPHDLFCAEYCGRDHSNMHAFV-YVYETGDFDAWLEKASNLYEGNTMV 231 Query: 247 DMAAF----EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 + + + + + D F MD Sbjct: 232 QVGEILYKRKGCISCHSIDGTKKAGPSFKDSFGTAHKFTDGTEAVMDEN 280 >UniRef50_Q0AI63 Cytochrome c oxidase, subunit II n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AI63_NITEC Length = 333 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 104/297 (35%), Positives = 147/297 (49%), Gaps = 21/297 (7%) Query: 17 AGTVLLSGCNS----ALLDPKGQIGLEQRSLILTAFGLMLI-VVIPAILMAVGFAWKYRA 71 +LLSGCNS + L+P+G I Q ++ I + +P + AW YR Sbjct: 33 VALLLLSGCNSAEHLSFLNPQGPIATAQSEHFWLVVAILFILIALPVFIGTAWIAWHYRY 92 Query: 72 SNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 +KY P W +E W +PI I++FL+VL W+ T +P LA + ++V Sbjct: 93 GATKSKYVPRWEIFKPLEYFSWGIPIAIVLFLSVLVWEDTERFDPYHTLASSKPATHVQV 152 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 + DWKW F+YPE GIA+V +AFPA P+ ++TS +VM SFFIP LGSQIYAM GM T Sbjct: 153 IGYDWKWLFVYPEHGIASVGMLAFPAEQPLTMELTSATVMQSFFIPALGSQIYAMGGMVT 212 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 +L+L A+ PG + G + YSG GF KF A+A FD WV + + + D AA Sbjct: 213 QLNLQADRPGHFLGENTMYSGDGFHQQKFVAVAM-TLTDFDAWVQQVRATGIPF-DAAAL 270 Query: 252 EKLAAPSEY--------------NQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPE 294 +A + YF+ VK + F D++ M Sbjct: 271 NAIATQGTKAQLSTALAPAAPTFDGNVYFTGVKANFFTDLVISVMDEKPLPSTALAP 327 >UniRef50_A9F8S3 Cytochrome c oxidase subunit 2 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F8S3_SORC5 Length = 362 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 98/286 (34%), Gaps = 27/286 (9%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 L + + + E L + L+ F +YR +D P+ + Sbjct: 11 LPEQRSSLAREIDGLHYFVILATMGGAALITLIGGYFLIRYRRRLQDTP-RPHPGAFARP 69 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 + TV + + FL LT+ T + + + + + V W W F Y G Sbjct: 70 ALFLETVSLFALGFLF-LTFWTIGTRQFADLRTAPDDALDVYVTGKQWMWKFGY-PGGDR 127 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 ++ + PA+ PV +TS V++SF++P + + G T ANEPG Y + Sbjct: 128 EISVLYVPAHRPVRLIMTSRDVIHSFYVPEFRIKQDVIPGRYTTAWFEANEPGAYPILCT 187 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS-----------------------PNTM 245 + G S M+ + IA D +++W+A S P+ Sbjct: 188 EFCGTSHSEMRGQVIAL-DPVDYERWLAGGLASAPAFAQEAAAEAENELAEAEPTMPSRG 246 Query: 246 SDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 AA + + L+ V+ + D Sbjct: 247 ERAAAKHGCLRCHTLDGTPHVGPSWAGLYRAVVPLESGGERVADEA 292 >UniRef50_Q1YUZ5 Cytochrome c oxidase subunit 2 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUZ5_9GAMM Length = 381 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 107/333 (32%), Gaps = 56/333 (16%) Query: 16 FAGTVLLSGCNSALLDPKG--QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 AG+ S L P+G ++ + + + ++ + + +R S Sbjct: 21 IAGSAFAESSASQLNMPQGVTEVSQAAYDIHMIMIWVCTVIGVGVFGFMFYVMYAHRKSR 80 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVS 133 + N+ VE + VP +I+I +A K D I I++ Sbjct: 81 GA--VAENFHEHLGVELLWTIVPTIILIVMAFPATTAL-----LKVYDTDNPDIEIKITG 133 Query: 134 MDWKWFFIYPEQGI-------------------------ATVNEIAFPANTPVYFKVTSN 168 WKW + Y +G+ + P + F VT N Sbjct: 134 YQWKWQYEYLGEGVKFMSELRTSDDEVYGREPKGEHYLREVTEALVLPVGKKIRFLVTGN 193 Query: 169 SVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDR 228 V++S+++P G + A+ G+ T ++PGTY G G G + M + + Sbjct: 194 DVIHSWWVPDFGVKRDAVPGLFTAGWAKTDKPGTYVGECTELCGQGHAFMPVV-VEVKEE 252 Query: 229 AAFDQWVAKAKQSP----------------NTMSDMAAFEKLAAPSEYNQVEYFSNVKPD 272 A +++W+A K + + A + + P Sbjct: 253 AEYNEWLANKKAEAVEYASTIGKEWAPEELMAKGEEVYLQSCAGCHQADGGGI-----PG 307 Query: 273 LFADVINKFMAHGKSMDMTQPEGEHSAHEGMEG 305 +F + +A G + + M+ Sbjct: 308 VFPAIKGSPIALGPQIGHIAVLIDGVPGSAMQS 340 >UniRef50_B2S9W4 Cytochrome c oxidase subunit 2 n=61 Tax=Alphaproteobacteria RepID=B2S9W4_BRUA1 Length = 372 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 97/295 (32%), Gaps = 41/295 (13%) Query: 5 KYNKSLGWLSLFAGTVLLSGC----NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 + L+ L+ D I + ++ + + + Sbjct: 86 RGAMGGALAVLWTTGAALADQPRPWEWRFQDAATGIAEQIHWFERYTLWFIIPITLLVLG 145 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 + V ++RAS SH+ +E + P++I++FLAV +++ + Sbjct: 146 LLVWVVLRFRASVNPE--PSKTSHNTAIEVIWTVGPVIILLFLAVPSFQLL-----TAQY 198 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQG----------------------------IATVNE 152 + ++ +T++ W W + Y + NE Sbjct: 199 SPEDPTLTVKATGYQWYWGYEYQVDNPVSFDSVILKDDDRAAAGKEDRARYSRLLTVDNE 258 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P V VT++ V++S+ IP G ++ A+ G A++ G Y G + G Sbjct: 259 VVVPVGETVRLLVTASDVIHSWTIPAFGVKMDAVPGRINETWFKADKEGLYYGQCSELCG 318 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFS 267 M + + W+ A + ++ A + S ++V Sbjct: 319 KDHGFMPIAVRVV-SKDQYQNWL-SAAATDLPGANKALLQAEGEGSANDKVAAAG 371 >UniRef50_D2X915 Cytochrome c oxidase subunit II n=1 Tax=Sorangium cellulosum RepID=D2X915_SORCE Length = 387 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 100/303 (33%), Gaps = 38/303 (12%) Query: 15 LFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNK 74 L + L G I + L + + L A +YR + Sbjct: 5 LLRKLLFLPGQ-------WSTIAFDIDKLHYFVISVTMAGATLVALFAAYLMIRYRRRQR 57 Query: 75 DAKYS-PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVS 133 D + P + + V V LI++FL W + ++ P+ + V Sbjct: 58 DVEGPFPGATARPPLLLEVGMVLGLIVLFLV---WWVIGMRQYAELRVAPADPVVVYVTG 114 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 W W F Y +G ++V + PA PV +TS V++SFF+P + + G T L Sbjct: 115 KQWMWKFAY-PEGPSSVATLYVPARRPVKLVMTSRDVIHSFFVPDFRIKYDVVPGRYTTL 173 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNT--------- 244 A PG Y + Y G S M+ + IA + + F +W+++ + Sbjct: 174 WFEATAPGAYQILCTEYCGTNHSTMRGEVIAL-EPSDFARWLSERGRGAGIAGQEYTPPS 232 Query: 245 ----------------MSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM 288 ++AA E + + L+ V+ Sbjct: 233 TPGEGIPREPLSLVRLGENIAAEEGCLRCHTPDGTPHIGPTWAGLYMSVVPLESGGAAVA 292 Query: 289 DMT 291 D Sbjct: 293 DDA 295 >UniRef50_C6B875 Cytochrome c oxidase, subunit II n=4 Tax=Rhizobiales RepID=C6B875_RHILS Length = 330 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 112/328 (34%), Gaps = 35/328 (10%) Query: 12 WLSLFAGTVLLSGCNSA--LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 + ++ LSGC + LD G + LI+ + +V + +L+ + Sbjct: 6 IIGPSLASLCLSGCTGSQSALDAAGASASALKQLIVVIVVVCAVVWLLVMLVLAWSLLRP 65 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R A II L ++++ TT K E +T+ Sbjct: 66 RDGRGVAGNDQKARKVVAGAVAA---TAFIIAGLTIISFYTTR-----KIGEASETALTV 117 Query: 130 EVVSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 V W W FIYP+ G T NE+ P V ++ S V++SF++P L ++ Sbjct: 118 TVRGQQWWWQFIYPDDGSGREFKTANELHIPVGQAVKLRLESADVIHSFWVPSLAGKLDL 177 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 + G L L A+ PG Y G A Y G S M IA + + + QWV ++ Sbjct: 178 IPGRINELTLHADRPGIYRGQCAEYCGLQHSHMAVLVIAEDEVS-YRQWVQGQQRERLPP 236 Query: 246 SDMAAFEK--------LAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM--------- 288 +D AA PDL + +A G Sbjct: 237 ADPQVTAGETVFMSKPCAACHTIRGTSAAGVTGPDLTHVGSRQTIAAGLLPNTRGSLAAW 296 Query: 289 ---DMTQPEGEHSAHEGMEGMDMSHAES 313 T G + + G ++ + Sbjct: 297 IADPQTLKPGNNMPLVPLSGEELKQVSA 324 >UniRef50_A0KDK6 Cytochrome c, monohaem n=47 Tax=Burkholderia RepID=A0KDK6_BURCH Length = 434 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 97/270 (35%), Gaps = 23/270 (8%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 ++ G L L V + ++ + ++ R + + + Sbjct: 129 VVHAAGPAAQPVFVLGWALLALCTFVCVAIAVLLLIALFRRRVQAGGG-------YGSGL 181 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ--- 145 V I I++ L + + P +TI V + DW W YP+ Sbjct: 182 TIVTVGTAISILLLFGALVYMLRVLGAVAAPPR--PPTLTITVTAQDWWWAVRYPDDADG 239 Query: 146 -GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYD 204 G T NEI P PV ++ S V+++F++P+L + + G R L A+ PG Y Sbjct: 240 RGFVTANEIHIPVGQPVAIELKSADVIHAFWVPQLAGKTQTIPGQTNRQWLQADRPGVYR 299 Query: 205 GISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM---------SDMAAFEKLA 255 G + Y G + M F+ +A P AAF W+A +Q + A Sbjct: 300 GQCSQYCGAQHAHMAFEVVAEP-PAAFHAWLAAQRQPAPAPAAGAGAERRGQRVFAARCA 358 Query: 256 APSEYNQVEYFSNVKPDLFADVINKFMAHG 285 + + PDL + +A G Sbjct: 359 GCHAVRGTDAAGDAGPDLTHVGTRRLLAAG 388 >UniRef50_C1A5N6 Cytochrome c oxidase subunit 2 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5N6_GEMAT Length = 429 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 11/219 (5%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 + + + +L +V I V ++YR A +P H N Sbjct: 33 STFNHYTEYNTAIDALWDKLLFWGTLVFIGVEAGLVYTIFRYRRRPGGA--TPKQVHGNT 90 Query: 88 VEAVVWT-VPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 + WT +P +I++F+A+ T T + + +EV+ W W F YP+ G Sbjct: 91 ALEITWTAIPAVILVFIAIPTVSTIFKTQAK----AAPDALQVEVIGHQWWWEFKYPQLG 146 Query: 147 IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE---PGTY 203 I T NE+ P V F++ + V++SF+IP++G + ++ L N + Sbjct: 147 ITTANELYLPNGRTVNFQLKTVDVLHSFWIPQMGGKRDLVSNRTNYLWFTPNADLPSSAW 206 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 +G A + G + M+F+ A F+QW A KQ Sbjct: 207 NGFCAEFCGASHANMRFRVYTV-TPAEFEQWAAHQKQPA 244 >UniRef50_Q5P900 Chain II protein of putative cytochrome c oxidase n=2 Tax=Proteobacteria RepID=Q5P900_AZOSE Length = 279 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 98/252 (38%), Gaps = 12/252 (4%) Query: 1 MRLRKYNKSLGWLSLFAGTVL---LSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVV 55 M +R + + + L+ C ++LDP G + L + +V+ Sbjct: 1 MPMRSAPAAALAVQSVLPVLAVPWLAACEGPQSILDPAGPAARDVTLLWWPMLIVATLVL 60 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + R + V +P I+ L + Sbjct: 61 VGVTV--AWIVAMLRRPRDFSPNEAKRISRRWVVNGGILLPTASIVLLLGFGVPAADRML 118 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFF 175 P + DE P+ I+V W+W YP G V+E+ PA PV+ VTS V++SF+ Sbjct: 119 PRR----DEAPLRIDVTGRQWQWDVAYPGGGAVLVDELHLPAGRPVHLHVTSADVIHSFW 174 Query: 176 IPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 +PRLG +I A+ G L L A+E G+ G + + G G + M K A F W+ Sbjct: 175 VPRLGPKIDAVPGRTNVLRLQADEAGSLRGQCSEFCGTGHAHMVLKVQVH-SEADFSAWL 233 Query: 236 AKAKQSPNTMSD 247 A+ + D Sbjct: 234 AERTATAPAGGD 245 >UniRef50_C6WU65 Cytochrome c oxidase subunit 2 n=2 Tax=Betaproteobacteria RepID=C6WU65_METML Length = 404 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 114/353 (32%), Gaps = 58/353 (16%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 G L L + + +P + L+ + ++ ++ + + + + K+ Sbjct: 11 FGLLLLLTAPQVFAEIRWNFPEPVTPMALDTLHVHNKFMLIVAVIFVVVLAIMIYSLIKH 70 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFL-----AVLTWKTTHALEPSKPLAHDE 124 R S + + S E +P +I++ + + + + +E +K +E Sbjct: 71 RKSVGHQAVTDK-APSTATEIFWTLIPFVILLVIDFIIMGIPAYHSVVMMEDTK----NE 125 Query: 125 KPITIEVVSMDWKWFFIY------------------------------------------ 142 + I++ W+W + Y Sbjct: 126 SDMMIKITGSQWRWQYEYAGNTEKGNQNGLIDAKGIKFTSTLSTPQDQVNGTVPPVNDPK 185 Query: 143 PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT 202 + N + P V +TS V++++++P+ GS A+ G + ++ GT Sbjct: 186 SPYLLDVDNRLVLPVGAKVRILMTSTDVLHNWWVPQFGSSRVAVPGFIRETWVQVDKAGT 245 Query: 203 YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQ 262 Y G G G M A P +A + WV + ++ + A E ++ Sbjct: 246 YRGQCKELCGKGHGYMPVVVDALP-KAEYAVWVEQKQKEITAQAAGADKEW-----SKDE 299 Query: 263 VEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH 315 + V + V ++ G G A + G D + +H Sbjct: 300 LVAQGKVVYEKNCAVCHQVTGAGLPPAFPALTGSKIATSPIFGADGKYLPDSH 352 >UniRef50_A9VZ92 Cytochrome c oxidase, subunit II n=9 Tax=Alphaproteobacteria RepID=A9VZ92_METEP Length = 362 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 86/247 (34%), Gaps = 12/247 (4%) Query: 27 SALLDP--KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH 84 A L P + ++ + + +V+ + + + FA ++R + + Sbjct: 7 PAFLRPESASVQAAKVDTIFVGLLLISSAIVLLVVGLILTFAIRFRRGSPAKRGEMPSVV 66 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 S + E + I +F+ A + + I I VV W W Sbjct: 67 SREFEIGWTAATLFIFVFIFW-----WAASVEIVAFSPPKDAIEIHVVGKQWMWKTQ-GP 120 Query: 145 QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYD 204 G +NE+ P PV +TS V++SF++P + A+ QT A + GTY Sbjct: 121 SGTREINELHVPVGAPVRLLLTSQDVIHSFYVPAFRLKRDALPYQQTETWFQATKTGTYH 180 Query: 205 GISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS---PNTMSDMAAFEKLAAPSEYN 261 + Y G S M + I + + QW+ + + + + + Sbjct: 181 LLCTEYCGTDHSRMLGRVIVM-EPQDYAQWLTRQPERDGLAELGERLFSARGCSGCHNAG 239 Query: 262 QVEYFSN 268 + + Sbjct: 240 STVHAPS 246 >UniRef50_B3CN60 Cytochrome c oxidase subunit 2 n=7 Tax=Wolbachia RepID=B3CN60_WOLPP Length = 254 Score = 191 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 29/245 (11%) Query: 16 FAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKD 75 + + P +I +M+ +++ + +++R Sbjct: 15 ISIASAPTSWQFGFPAPATEIMEVVVKSHSFVMSVMIAIMLFVWALLAYVVFRFRKGKVK 74 Query: 76 AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMD 135 +H+ VE + + +P +I+ LA + E + IT++V+ Sbjct: 75 N--VSKITHNIFVEIIWFVIPTIIVGVLAFKNAELIKLQEKV-----PKADITLKVIGHQ 127 Query: 136 WKWFFIYPEQG---------------------IATVNEIAFPANTPVYFKVTSNSVMNSF 174 W W + YPE + N + P NT + +VT+ V++S+ Sbjct: 128 WYWSYKYPEYQGISFDSYIKGKEDLTERDLKLFSVDNNVILPINTNIRLQVTAGDVIHSW 187 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 IP G +I A+ G +PG Y G G G M A + F++W Sbjct: 188 GIPAFGIKIDAIPGRLNEAWFNVTKPGIYYGQCYELCGQGHGFMPIVVEAV-SKEDFNKW 246 Query: 235 VAKAK 239 + K Sbjct: 247 IEDKK 251 >UniRef50_C9YTU0 Cytochrome c oxidase subunit 2 n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YTU0_STRSW Length = 330 Score = 191 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 97/303 (32%), Gaps = 57/303 (18%) Query: 4 RKYNKSLGWLSLFAGTVLLS--GCNSALLD------PKGQIGLEQRSLILTAFGLMLIVV 55 R+ + ++ AG VL + GC P + SL ++ L Sbjct: 22 RRPMRRKLLQAMTAGLVLATATGCTWEDFPRLGMPTPTTEEAPRILSLWQGSWAAALATG 81 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + + A+ +R S + P ++ +EA+ VP++I+ L T + E Sbjct: 82 VLVWGLILWSAFFHRRSRTKVEVPPQTRYNMPIEALYTVVPLIIVSVLFYFTAR----DE 137 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQ------------------------------ 145 + +T+ VV W W F Y E Sbjct: 138 SKLLDTSKKPDLTVNVVGFQWSWCFNYIENVEGSTGDAATDKNLAAIPNRYKEDFPANAG 197 Query: 146 GIATV--------------NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 G+ T + P V F +TS V++SF++ + + G Sbjct: 198 GVYTCGIPGDKNPQTGNPGPTLWLPKGKTVRFVLTSRDVIHSFWVVPFLMKQDVIPGHTN 257 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 + N+ GT+ G A G S M F +++ + + T A Sbjct: 258 AFQVTPNQEGTFLGKCAELCGVDHSRMLFNVKVV-SPERYEEHLKSLVEKGQTGYVPAGI 316 Query: 252 EKL 254 E+ Sbjct: 317 EQT 319 >UniRef50_C8SJH9 Cytochrome c oxidase, subunit II n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SJH9_9RHIZ Length = 355 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 13/251 (5%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAI 59 R+R G L++ G+ LL GC + LDP G+ L T ++ +V + + Sbjct: 96 RVRSPL--AGPLAVIVGSALLPGCAGVQSALDPHGEQADTLAVLFWTFMAVLGVVWLVTM 153 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV---WTVPILIIIFLAVLTWKTTHALEP 116 + R S + + + T +I+ LA+L++ A+ Sbjct: 154 AGLLLALTHRRDSRGEPAEGARPAVKRPMLIAFAAMLTSTTIILSGLALLSFGGQRAI-- 211 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYP-EQGIATVNEIAFPANTPVYFKVTSNSVMNSFF 175 + I V W W Y G T NEI P +PV K+ + V++SF+ Sbjct: 212 --FADGAAGALAISVTGHQWWWQVRYEGNDGFETANEIRIPVGSPVDIKLATADVIHSFW 269 Query: 176 IPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 IP L ++ + G L + A++PG Y G A + G + M +A + F +W Sbjct: 270 IPSLAGKLDLIPGKSNELRIEASKPGIYRGQCAEFCGQQHAHMAIFVVAL-EPNDFQRWR 328 Query: 236 AKAKQSPNTMS 246 A + + Sbjct: 329 AGQAAAAKPVD 339 >UniRef50_A1SLF8 Cytochrome c oxidase subunit 2 n=1 Tax=Nocardioides sp. JS614 RepID=A1SLF8_NOCSJ Length = 324 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 91/285 (31%), Gaps = 40/285 (14%) Query: 6 YNKSLGWLSLFAGTVLLSGCNSALL---------DPKGQIGLEQRSLILTAFGLMLIVVI 56 + ++ G ++L GC+S DP + G + +L A+ L+ + Sbjct: 30 ARRVAALAAIGVGVLVLGGCSSETQGEWKRLAMPDPASEQGEQVLNLWQGAWIAALVTGV 89 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP 116 + W++R ++D + ++ +E PI+++I T K +A+ Sbjct: 90 IVWGLIFYAIWRFRRRSED-EIPVQTRYNLPLEIFYTIAPIIMVIVFFAHTVKVQNAILD 148 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQG-------------------------IATVN 151 + TIEVV W W F Y + + Sbjct: 149 DDLPVDN----TIEVVGQQWSWTFNYGIGEQDASANDDATDDVFAYSSYVHEAGTGSYIP 204 Query: 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYS 211 + P F + S V++ +P ++ + G + G Y G Sbjct: 205 TLVLPVGETTRFNLHSPDVIHDLSVPAFLLKMDVVPGRVNHYEITPTRIGEYAGKCFELC 264 Query: 212 GPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 G S M F + ++ + + + T + A+ Sbjct: 265 GVYHSRMLFNVKVV-SADDYQTYLQQLQDAGATSQAPLLGGEYAS 308 >UniRef50_B8GPT4 Cytochrome c oxidase subunit 2 n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPT4_THISH Length = 380 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 108/346 (31%), Gaps = 52/346 (15%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALL-------DPKGQIGLEQRSLILTAFGLMLIVV 55 R ++SL +L + + P E + + G+ I++ Sbjct: 5 KRSRSRSLLAAALAVTGFGATAAADEVQRWGINFPPPASTTAQEIYDIHMLTMGIATILL 64 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWT-VPILIIIFLAVLTWKTTHAL 114 + + + +R S + H W VP++++ + L Sbjct: 65 VIIFAVVIYSLIVHRKSRG--YPADQRFHETWFGRWSWVFVPVMVLGVDLTIAGAAQKTL 122 Query: 115 EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI------------------ATVNEIAFP 156 E + D+ + ++V+ W W F+Y + + N + P Sbjct: 123 ERVWVVPQDQPLLDVKVIGHQWYWEFVYLDHDVKIESRYVPKEEAGIHYLREVDNRLVLP 182 Query: 157 ANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 + V F T++ V+++F++P L + A+ G T + G + G A G + Sbjct: 183 THQRVRFLHTASDVLHAFWVPELAVKKDAIPGYVTETWVNLTREGVFRGQCAELCGTWHA 242 Query: 217 GMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK------------------LAAPS 258 M + + FD W+ + KQ A E+ AA Sbjct: 243 RMPIVVESV-SQERFDAWIEEQKQVKLAALAEATAEREWDKDELMARGERLYNTMCAACH 301 Query: 259 EYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGME 304 + + + P F + +A G + + M Sbjct: 302 QAD-----GSGMPPAFPAIRGSAVATGPIPRHMEVVLKGVPGTAMA 342 >UniRef50_A9WF38 Cytochrome c oxidase subunit 2 n=3 Tax=Chloroflexus RepID=A9WF38_CHLAA Length = 330 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 91/285 (31%), Gaps = 31/285 (10%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 D + L L LI + + +Y S K + +P + K+ Sbjct: 7 FPDQASTFATQVDQLYFFLVALSLIFAGVLPFVILYLIVRYHRSQKVDRSNP-VDSNLKL 65 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 E +P+++++ + W ++ P A + + V+ W W + G Sbjct: 66 ELTWTIIPLILVMLVFF--WGAFLYVQMRTPPAR---TLDVYVIGKQWMWHVQH-PNGKR 119 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 NE+ P PV +TS V++SF+IP + + G T + A +PG Y A Sbjct: 120 ENNELHVPIGQPVKLIMTSQDVIHSFYIPAFRVKQDVLPGRYTIMWFEATKPGEYHLFCA 179 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVA--------------------KAKQSPNTMSDM 248 Y G S M + +A P A +++W+A P + Sbjct: 180 EYCGTEHSLMIGRVVAMP-LADYERWLATPGPVVLPDGSIDTGQPTITANLGDPMAAAGS 238 Query: 249 AAFE--KLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 F A L+ + D Sbjct: 239 QLFTSLGCAGCHAMAG-GGVGPSMQGLYGATEKMADGSTVTADEN 282 >UniRef50_A6CA06 Cytochrome c oxidase subunit 2 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CA06_9PLAN Length = 336 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 94/281 (33%), Gaps = 27/281 (9%) Query: 15 LFAGTVLLSGCNSALLDPKGQ-IGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 LF +L + +G + S+ + + + + + F KYR Sbjct: 5 LFIPELLANAEAGFWFPAQGSTVAENVDSVYFFILWVCTFFFVLIVGLMLLFMVKYRYRP 64 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVS 133 + +H+ +E +P L+ I + + + T L+ P A I+VV+ Sbjct: 65 GVEAENTA-THNLTLELSWSVIPTLLTIVMFWVGF--TSYLDMRTPPAAS---YQIDVVA 118 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 W W F YP I + E+ P + V + S+ V++S +IP +++ + G T+ Sbjct: 119 KKWVWAFKYPNGWIES--ELHIPLDENVTLTMASDDVIHSLWIPAFRTKMDVVPGRYTQE 176 Query: 194 HLIANEPGT------------YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA--- 238 A P Y + + Y G S M K + R FD+W+ A Sbjct: 177 WFKAIAPPVPEGEESVEYPLEYPLMCSEYCGTKHSEMVTKVVVHETRGDFDKWLQAAADI 236 Query: 239 ---KQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD 276 K + LF Sbjct: 237 HKNKNPIEAGEYFYKSRGCIQCHSLDGSIIKGPSFKGLFGS 277 >UniRef50_B1ZMS7 Cytochrome c oxidase subunit 2 n=2 Tax=Opitutaceae RepID=B1ZMS7_OPITP Length = 425 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 11/220 (5%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKY--SPNWSHS 85 + + G + Q + ++L++ + K+RA N ++ P SH Sbjct: 47 SAVHADGPVARAQAEVFHVTVWVVLVIFVLVGSTLAYAILKFRARNAADEHAAPPPQSHG 106 Query: 86 NKV-EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 N + E + +L ++ +AV T K P I W + F YP Sbjct: 107 NPLIELSLIGASVLALVVIAVPTLKGIWYTHDV-PAEEKADAYPITAQGYQWWFRFEYPN 165 Query: 145 QGI------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIAN 198 + I T NE+ PA PV + V++SF++PRL ++ + L L A+ Sbjct: 166 EQIPNVGSLVTSNELVIPAGRPVRIDLRGMDVIHSFWVPRLAGKVDMIPNRANFLWLKAD 225 Query: 199 EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 EPG + G A Y G + M+F+ IA F++W+ + Sbjct: 226 EPGYFWGQCAEYCGDSHAVMRFRVIAL-GPREFNEWLEQQ 264 >UniRef50_Q3J6Q8 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosococcus oceani RepID=Q3J6Q8_NITOC Length = 281 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 85/235 (36%), Gaps = 33/235 (14%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW 93 E L + F + + V I + + +R S + + + +E Sbjct: 39 TPTSEEIYDLHMLIFWICVGVGILVYGIMAWSIYHHRKSKGA--VASQFHENLTLEVTWT 96 Query: 94 TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG------- 146 +P+LI+I +AV + +TI+V W+W + Y + Sbjct: 97 VIPLLILIAVAVPATSAMV-----RIYDSSASDLTIKVTGYQWRWHYEYVDHDFGFTSSL 151 Query: 147 ------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG 188 + N + P + V F +T++ V ++F++P G + A+ G Sbjct: 152 STPFDQIVNKAPKGEHYLLEVDNPLVLPTDKKVRFVITADDVNHAFWVPAFGFKQDAIPG 211 Query: 189 MQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPN 243 + EPG Y G A G G M A FD+W+A++K + + Sbjct: 212 FINEAWAVIQEPGIYRGQCAELCGRGHGYMPIVVEA-KTPEEFDKWMAESKAAQS 265 >UniRef50_C6XR85 Cytochrome c oxidase subunit 2 n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR85_HIRBI Length = 326 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 92/313 (29%), Gaps = 51/313 (16%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCN------SALLDPKGQIGLEQRSLILTAFGLMLIV 54 MRL + N + ++ ++ Sbjct: 19 MRLHGLKLGAAIAGALTVGAGAAFANEPVAMALGPQPAASAVAENVTWFHNYVMVIITVI 78 Query: 55 VIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL 114 I + K+ A +SH+ +E + P+LI+ +A+ ++ Sbjct: 79 TIFVTFLLGWVILKFNAK--ANPVPAKFSHNTAIEVIWTVAPVLILFAIAIFSFPLLFEQ 136 Query: 115 EPSK----------PLAHDEKPITIEVVSMDWKWFFIYPEQG------------------ 146 + E +TI+ W W + + Sbjct: 137 DVEPTKQKLENGEYAEIAPEDWVTIKTYGRQWYWSYFIDTENADGEVEVVEFDARMIAED 196 Query: 147 -----------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHL 195 ++T N + P + + ++ V++S+ +P + A+ G +L Sbjct: 197 DIPSTPGARRNLSTDNPLVLPQGKYIRMNLAASDVIHSWAMPAFRLKTDAVPGRLNQLWF 256 Query: 196 IANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLA 255 A + G Y G + G + M + P + +DQW++ A N + + + Sbjct: 257 KAEKLGVYYGQCSELCGRDHAFMPIEMRIVP-QDQYDQWLSLA---ANDIDEATTYINQV 312 Query: 256 APSEYNQVEYFSN 268 AP V S Sbjct: 313 APRPAAPVRVASA 325 >UniRef50_B4DA33 Cytochrome c oxidase subunit 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA33_9BACT Length = 317 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 93/267 (34%), Gaps = 11/267 (4%) Query: 27 SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSN 86 L + I E +L L I+ I + F +YR + + + + Sbjct: 8 WFLPERASDIAREVDALFYGLLVLCGIIAIGVCAAVIVFCLRYRQGSNATRQAEQKT--I 65 Query: 87 KVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 +E +P++I F+A+ W SKP + I VV W W +P G Sbjct: 66 PLEITWSAIPLVI--FIALFIWAGAVYFHMSKP---PDNATEIHVVGKQWMWKIQHPT-G 119 Query: 147 IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 +NEI N PV +TS V++ F+P ++ + G T + G Y Sbjct: 120 RREINEIHLLINQPVKLLMTSQDVIHDVFVPAFRTKQDVLPGRYTIEWFTPIKTGDYHLF 179 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYF 266 A Y G G S M A+ +W+A + + ++ A + + + Sbjct: 180 CAEYCGDGHSRMGGWVHVMA-PDAYAKWLADTSTTESVVAAGARLFQARGCAGCHGPNAT 238 Query: 267 SNVKP--DLFADVINKFMAHGKSMDMT 291 + P +F + D Sbjct: 239 VHAPPLNGIFGHPVALSTGKTVIADEQ 265 >UniRef50_B7KCJ0 Cytochrome c oxidase subunit 2 n=12 Tax=Cyanobacteria RepID=B7KCJ0_CYAP7 Length = 316 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 111/293 (37%), Gaps = 24/293 (8%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSG--CNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 M L ++ + + A L G S L +L L + + Sbjct: 16 MSLYRWLMLIALALVLAIISLGIGKLSYSWLPPQASAESQLIDNLFSFLVTLGSFIFLGV 75 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE--- 115 + + +AS D+ P+ + +E + +PIL+++++A +++ + Sbjct: 76 TGTVLYSIFFQQASKYDSSDGPHIEGNITLEVIWTAIPILLVVWIATYSYQIYIDMNIQT 135 Query: 116 -----------------PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPAN 158 + E+ I+V + W W F YPEQG+++ E+ P++ Sbjct: 136 GMGLGHIHLPIKMESAMAAPMTNGSEEVENIDVQAKQWAWVFNYPEQGVSST-ELHLPSD 194 Query: 159 TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM 218 + + S V++ F+IP + A+ G ++ G Y + +SG F+ M Sbjct: 195 RRIRLTLKSEDVIHGFYIPAFRIKQDAIPGRTIQVEFTPIRQGKYRLRDSQFSGTYFATM 254 Query: 219 KFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 + + +W+ + + T+++ A + A + + + ++ P Sbjct: 255 QANV-VVQSPEDYQKWLKTSSKLKPTVAENEAASEYAQEVKASFKTGWPSIAP 306 >UniRef50_Q9X814 Probable cytochrome c oxidase subunit 2 n=21 Tax=Streptomyces RepID=COX2_STRCO Length = 319 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 95/304 (31%), Gaps = 57/304 (18%) Query: 4 RKYNKSLGWLSLFAGTVLLS--GCNSALLD------PKGQIGLEQRSLILTAFGLMLIVV 55 R+ + +L AG VL + GC P + SL ++ L Sbjct: 11 RRPMRRKLLQALTAGLVLATATGCTYEDFPRLGMPTPTTEEAPRILSLWQGSWAAALATG 70 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + + + +R S + P ++ +EA+ VP++I+ L T + E Sbjct: 71 VLVWGLILWSVFFHRRSRTKVEVPPQTRYNLPIEALYTMVPLVIVSVLFYFTAR----DE 126 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQ-----------------------------G 146 + + +T+ VV W W F + E G Sbjct: 127 SDLMSLNKKPDLTVNVVGFQWSWCFNHIEDVPGSTGDAKTSKELAGIPDRFIEDFPANAG 186 Query: 147 IATVN---------------EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 + P V F +TS V++SF++ + + G Sbjct: 187 GVYDCGTPGTENPQTGNPGPTLWLPKGKTVRFVLTSRDVIHSFWVVPFLMKQDVIPGHTN 246 Query: 192 RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 + N+ GT+ G A G S M F ++Q + + T A Sbjct: 247 AFEVTPNKEGTFLGKCAELCGVDHSRMLFNVKVV-SPERYEQHLQDLAKKGQTGYVPAGI 305 Query: 252 EKLA 255 + + Sbjct: 306 AQTS 309 >UniRef50_Q114N6 Cytochrome c oxidase subunit 2 n=9 Tax=Cyanobacteria RepID=Q114N6_TRIEI Length = 339 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 94/305 (30%), Gaps = 59/305 (19%) Query: 9 SLGWLSLFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 +L + L +G N LL + F + + I V Sbjct: 13 TLVVGIVVTIISLWAGQNHGLLPEAASEQAPLVDRFFDIMFTIATGLFIIVEGTIVFCMI 72 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT---------------- 111 K+R D N+ + +E +P +I+I L + + Sbjct: 73 KFRRRQGDDSDGANFRENLPLEIFWTAIPSIIVIGLGIYSVDIYRQMGGFDPNSTMVAHH 132 Query: 112 -----------------------------------HALEPSKPLAHDEKPITIEVVSMDW 136 + + A + + +++ + + Sbjct: 133 HAPSYQEVAKMRGSAIAAPLIADTEGMEATKVASKYGFGATPQGAGKQADVIVDITGIQY 192 Query: 137 KWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLI 196 W YP+ G+ E+ P N + +++ V++SF+IP + A+ G +T+L + Sbjct: 193 GWLMNYPDSGV-FAGELHIPVNKDIQINLSAQDVIHSFWIPAFRLKQDAIPGKETQLRFV 251 Query: 197 ANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAA 256 A + G Y A G M+ + + W+ + NT + + A Sbjct: 252 ATKIGEYPVYCAELCGSYHGAMRTTV-VVQTQEEYAAWIEE-----NTFAQQQELNQAIA 305 Query: 257 PSEYN 261 + + Sbjct: 306 VNTAD 310 >UniRef50_Q47G11 Cytochrome c oxidase subunit 2 n=2 Tax=Betaproteobacteria RepID=Q47G11_DECAR Length = 401 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 103/324 (31%), Gaps = 43/324 (13%) Query: 23 SGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNW 82 +G + +P I E + ++ + + + + ++R S+ + Sbjct: 37 AGYSFNFPEPVTPIARETLHIHNEFMLIITTLFVVVFAIMIYSMIRHRKSSGHQ--PSKF 94 Query: 83 SHSNKVEAVVW-TVPILIIIFL-----AVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 S W +P I++F+ + + +E +K + + ++V M W Sbjct: 95 SGPTGALQWFWALIPFAILLFIDFVLMGIPAVQAIINMEDTK----TKADLVLKVTGMQW 150 Query: 137 KWFFIYPEQGI-------------------------ATVNEIAFPANTPVYFKVTSNSVM 171 KW + YPE G+ + P V +TS V+ Sbjct: 151 KWQYEYPEAGVKFISTLATPRDQITNAEAKGEHYLLEVDKPVVLPVGKKVRVLLTSIDVI 210 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF 231 +++++P+ G + A+ G ++ +PG Y G A G M A P+ + Sbjct: 211 HTWWVPQFGVKRDAIPGFLRETWVLIEKPGIYRGQCAELCGKDHGFMPVVVHAVPEP-EY 269 Query: 232 DQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 W+ K + A +++ + ++ G Sbjct: 270 LAWLEAQKAEAKATAGGADRTW-----SRDELMAQGKAVYEKVCAACHQPDGKGLPPAFP 324 Query: 292 QPEGEHSAHEGMEGMDMSHAESAH 315 G + + M+ +H Sbjct: 325 ALAGSKIVNGPLLDMNGKVITDSH 348 >UniRef50_B0RIL0 Cytochrome c oxidase subunit 2 n=6 Tax=Actinobacteria (class) RepID=B0RIL0_CLAMS Length = 316 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 98/291 (33%), Gaps = 42/291 (14%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLD---PKGQ----IGLEQRSLILTAFGLMLI 53 +R + + L ++LL+GC L P L +TA+ ++L Sbjct: 14 VRFTRRQRWLTIPVALGISILLAGCTQQQLQGFLPTEPGTTNHVDSVIGLWVTAWIVLLA 73 Query: 54 VVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHA 113 V + + + A YR ++ +E VP+++++ T K A Sbjct: 74 VGVLTWGLTIWAAVVYRRRKGQTGLPVQMRYNMPIEIFYTIVPLILVLGFFAFTAKDQAA 133 Query: 114 LEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIAT------------------------ 149 +E D+ + ++V W W F Y Sbjct: 134 IEARF----DKPEVKVQVFGKQWAWDFNYLGGETEAGQPIEGGAYEQGVQAVDDPNGPQG 189 Query: 150 ------VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 + + P NT V ++ + ++SF++ + ++G + I + GTY Sbjct: 190 SIDKDKLPTLYLPVNTKVELELNTRDTLHSFWVVDFLYKKDLISGKTNYMTFIPEKEGTY 249 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKL 254 G A G S M F+ ++ ++ K K + +++L Sbjct: 250 MGKCAELCGEYHSLMLFQVKVV-SVDEYNAYIEKQKAAGFAGDLGKDYDRL 299 >UniRef50_Q46SU8 Cytochrome c oxidase, subunit II:Cytochrome c, class I:Cytochrome C oxidase subunit II, transmembrane region n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46SU8_RALEJ Length = 316 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 88/238 (36%), Gaps = 11/238 (4%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 + +L+L+ L+ +V + ++ G +Y + P + + + Sbjct: 8 FPESASLAAGRYDTLMLSLTALLCVVALAVLVAIAGSVIRYHEHRPADRSHPPLA-NKPL 66 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 E T+P +++FL + W + + + + VV+ W W + G Sbjct: 67 EIAWTTIP--LLVFLGIFAWAA---HDYTLLAQETAGALPVTVVARQWMWKLEH-ANGKR 120 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 +NE+ P V +TS V++SF++P + + G T L A G Y A Sbjct: 121 EINELHVPLGQAVQLTMTSQDVIHSFYVPAFRIKQDVVPGRYTTLRFTATHAGVYRLFCA 180 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWV-AKAKQSPNTMSDMAAFE--KLAAPSEYNQV 263 Y G + M+ + + P A F +W+ A A F AA + Sbjct: 181 EYCGTDHAAMQGRIVVMP-PAEFARWLDADVGPETTAARGRALFRHYGCAACHDAGAT 237 >UniRef50_C1DG42 Cytochrome c oxidase subunit 2 n=5 Tax=Gammaproteobacteria RepID=C1DG42_AZOVD Length = 385 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 103/347 (29%), Gaps = 62/347 (17%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 +R +G LS A + + + + ++ L +T F + + + + Sbjct: 2 MRHPRLWMGLLSCSALSQAQAAWDVNMRPGVTEVSRSVFDLHMTIFWICVAIGVLVFGAM 61 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH 122 + +R S + ++ + +VE + +P+LI+I +AV +T + Sbjct: 62 FWSMFAHRRSRRPQ--PAHFHENTRVEVLWTVIPLLILIAMAVPATRTLLHI-----YDP 114 Query: 123 DEKPITIEVVSMDWKWFFIYPEQGIA-------------------------TVNEIAFPA 157 E + I+V WKW + Y + + + PA Sbjct: 115 SEPDLDIQVTGYQWKWHYKYLGEDVEFFSNLATDRNAIGNQAPKNDHYLLEVDEPLVIPA 174 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 V F VT+ V++S+++P L + A+ G EPG Y G G Sbjct: 175 GAKVRFLVTAADVIHSWWVPELAVKKDAIPGFINETWTRVAEPGLYRGQCTELCGKDHGF 234 Query: 218 MKFKAIATPDRAAF-------------------DQW-VAKAKQSPNTMSDMAAFEKLAAP 257 M + A + W + + + A A Sbjct: 235 MPV-VVEVKAPADYAAWLAGKKAAAAEATAQAGKAWTLEELVAQGERVYRTA----CVAC 289 Query: 258 SEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGME 304 + F + +A G + M Sbjct: 290 HQPTGEGLPPA-----FPALKGSKIATGPKEGHMNIVIDGKPGTAMA 331 >UniRef50_A5FXH9 Cytochrome c oxidase, subunit II n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FXH9_ACICJ Length = 334 Score = 186 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 149/295 (50%), Gaps = 17/295 (5%) Query: 24 GCNSA---LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 GC+ + DPKG + + + +M +++P + W+YR S A YSP Sbjct: 30 GCSGGPFRVFDPKGPVARASLNFTIIDVVVMAFIIVPTACFILWCIWRYRRSR-AAAYSP 88 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK-------PITIEVVS 133 +SHS K+EAV+W +PI+++ LA ++ T A++P P P+ I+VV+ Sbjct: 89 GFSHSLKLEAVMWGIPIVVVAGLAYASYNGTFAVDPYGPHVLRMPARAGRSHPLKIDVVA 148 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 DW+W FIYP+Q +A+V+ + PA V F++TS SV+N FFIP+L I M GM+T+ Sbjct: 149 TDWQWLFIYPKQHVASVDRLVVPAGRNVEFRLTSTSVVNDFFIPQLTDMIDVMPGMRTKD 208 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 + AN G Y+G +A++SG GFS M+F R F ++V A +P ++ A FE+ Sbjct: 209 AMRANGQGRYEGFAANFSGAGFSWMRFATDVVGKRG-FAKFVRHAAAAPAALT-YATFER 266 Query: 254 LAAPSEY--NQVEYFSNVKPDLFADVIN--KFMAHGKSMDMTQPEGEHSAHEGME 304 A P+ + YFS P LF ++ + G Sbjct: 267 FARPTINLDQRPRYFSAPAPHLFRRIVEASRNGKTYPVPPRLTEAMARDLRAGAS 321 >UniRef50_D1ATW6 Cytochrome c oxidase subunit 2 n=9 Tax=Anaplasmataceae RepID=D1ATW6_ANACI Length = 297 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 27/237 (11%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA-KYSPNWSH 84 +P +I +M V + + ++R + +++ SH Sbjct: 66 QLGFQEPATEIMELVAKSHDYVMLVMSAVAAVVFSVMLYTLVRFRRRKGEQVEFNNKNSH 125 Query: 85 SNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPE 144 + +E + VP++I+ FL + K K + I I+ + W W ++YPE Sbjct: 126 NVALEVMWTLVPLVIVGFLTISNVKLI-----KKEQQIPKADIVIKAIGYQWYWTYVYPE 180 Query: 145 QGI--------------------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 G+ N + P V + T+ V++S+ +P LG ++ Sbjct: 181 SGVRFDSYMKPDSELESGELRLLEVDNRMVVPVGEVVLLQSTAGDVIHSWAVPALGIKVD 240 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 A+ G + +PG Y G + G M A R FD WVA+ K+S Sbjct: 241 AVPGRLNEVWFSVKKPGVYYGQCSELCGRLHGFMPIVVEAV-TRDKFDAWVAQHKES 296 >UniRef50_A4WT84 Cytochrome c, monohaem n=9 Tax=Rhodobacteraceae RepID=A4WT84_RHOS5 Length = 324 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 113/323 (34%), Gaps = 26/323 (8%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +R+ ++ L + +G GC+ ++ G +E L A L+ V++ L Sbjct: 1 MRRGQRAAVCLLILSGAG---GCHGPQSVFSAGGADAIELNRLF--AVMLVGAVILWISL 55 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 + F R + ++ + + + +++ A+L W + + P Sbjct: 56 NGLFFHVTRRRTGHMSRKLAEAV------IIGGGILLPVVVLTALLAWGLSIMPDQRAPG 109 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSFFI 176 + + +W W Y +G + + NE+ PA ++ + V++SF++ Sbjct: 110 EGP----RVRITGEEWWWRVEYLPEGAAGPVISANELRLPAGRRTEIELQAGRVIHSFWV 165 Query: 177 PRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 P LG + + G TR+ L PGTY G A + G + M A + F +W+ Sbjct: 166 PGLGGKTDMIPGRTTRMSLEPVTPGTYRGQCAEFCGASHALMALNA-VVLEEGDFARWLE 224 Query: 237 KAKQS--PNTMSDMAAF--EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQ 292 P A F E A V PDL +A G Sbjct: 225 AEAAPARPEEGEGRAIFFREGCGACHTIRGTPAAGAVGPDLTHFGSRTSLAAGILPMERA 284 Query: 293 PEGEHSAHEGMEGMDMSHAESAH 315 A+ G + AH Sbjct: 285 ALVSWIANAGAIKPEAQMPAFAH 307 >UniRef50_P08306 Cytochrome c oxidase subunit 2 n=28 Tax=Rhodobacterales RepID=COX2_PARDE Length = 298 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 86/240 (35%), Gaps = 31/240 (12%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 + +Q+ L ++ V I L+ + ++ ++H+ Sbjct: 46 GMNFQPASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFNRR--ANPVPARFTHN 103 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 +E + VP+LI++ + + + ++ + I+ + W W + YP Sbjct: 104 TPIEVIWTLVPVLILVAIGAFSLPILFRSQEMP----NDPDLVIKAIGHQWYWSYEYPND 159 Query: 146 GIA------------------------TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGS 181 G+A T N + P V +VT+ V++++ IP Sbjct: 160 GVAFDALMLEKEALADAGYSEDEYLLATDNPVVVPVGKKVLVQVTATDVIHAWTIPAFAV 219 Query: 182 QIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 + A+ G +L ++ G Y G + G + M A + ++ W+A AK+ Sbjct: 220 KQDAVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAV-SQEKYEAWLAGAKEE 278 >UniRef50_Q7NMM6 Cytochrome c oxidase subunit 2 n=1 Tax=Gloeobacter violaceus RepID=Q7NMM6_GLOVI Length = 319 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 95/265 (35%), Gaps = 30/265 (11%) Query: 15 LFAGTVLLSGCNSALLDPKGQI-GLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 + + L+ G LL G L + ++ + + + V + ++ + Sbjct: 26 ITLASFLIGGNIDWLLPLAGSAEAKSVDQLFRFMAIVGTMITLAIVALLVYSGFAFKRAP 85 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD---------- 123 D P S ++E + +PI+++ FL V ++ L S P Sbjct: 86 DDYSDGPPIEGSLQLEILWTILPIVLVTFLGVYSYDVYLKLIRSNPQTGASHHLGPKSQL 145 Query: 124 ------------------EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKV 165 + +T+ V S+ W W F YP+ G T E+ P N PV K+ Sbjct: 146 REVAQVTDSPELGPKREGQTELTVAVESVQWAWVFTYPQSGGLTTAELHLPVNRPVVLKM 205 Query: 166 TSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIAT 225 T+ V++ F++P + + G T + L+ + G Y G M+ Sbjct: 206 TAKDVIHGFWVPEFRLKQDIIPGRTTEIRLLPDRVGEYVLHCTQLCGTYHGAMRATV-YV 264 Query: 226 PDRAAFDQWVAKAKQSPNTMSDMAA 250 A F++W + + +A Sbjct: 265 QTAAEFEKWRTTQVAAGERDAAVAT 289 >UniRef50_C7MCD6 Cytochrome c oxidase subunit 2 n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCD6_BRAFD Length = 312 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 85/233 (36%), Gaps = 22/233 (9%) Query: 38 LEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI 97 +L + ++ ++++V + + + A YR D + + +E + VP+ Sbjct: 53 ERITNLWVGSWTVLVLVGLIIWGLTIWCAIAYRRRKHDKGFPIQLRYHVPLELMFTLVPV 112 Query: 98 LIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI---------- 147 ++++ T + +E E T+ VV+ W W Y +Q + Sbjct: 113 VMVLTFFYFTQRDAREIEMH----VAEPDTTVNVVAKQWSWDINYVDQDVHEPAGVQSFA 168 Query: 148 -------ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP 200 ++ E+ P + V F++ S V++SF++ + G T + Sbjct: 169 TGEPGAADSLPELWLPVDQTVEFRLDSRDVIHSFWVVDFLYKKDMFPGHTTSFQITPTRE 228 Query: 201 GTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 G Y+G A G S M F + + FD + + + N + Sbjct: 229 GVYEGKCAELCGEYHSDMLFNVVVV-SQEEFDAHMEELRAQGNDGQLGVDLNR 280 >UniRef50_UPI00016C5496 cytochrome c oxidase, subunit II n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5496 Length = 364 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 85/285 (29%), Gaps = 34/285 (11%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVV 92 + + L M +V + F +YR +P S ++E Sbjct: 11 ASTLADQFEFLFWYMSITMGLVGLGVYAALAYFCVRYRRGQGTGS-TPRILGSTRLELTW 69 Query: 93 WTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA---- 148 +P+ +FL W + + ++ W W Y Sbjct: 70 TIIPLF--VFLTFYAWGVMVYDHHTH---APADAEEVFIIGKQWMWKAQYANGQRVIIGG 124 Query: 149 -----------TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197 ++ ++ P N PV +TS V++ F +P S++ + G T + Sbjct: 125 NPRNMTEAERNSIGKLVLPINRPVKLTLTSEDVIHDFGVPAFRSKVDVLPGRYTSVWYQP 184 Query: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK---AKQSPNTMSDMAAFE-- 252 + G Y Y G S M K IA + +++ + S N + A + Sbjct: 185 TKLGEYHIYCDQYCGTWHSLMVGK-IAVVQEDEYRKFLQGYEPLQGSDNPVDGSLAQQGQ 243 Query: 253 ------KLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 + + + + V L+ + + D Sbjct: 244 QLFLKLQCINCHSADA-KARAPVLEGLYGSTVPLAGGGKEVADDH 287 >UniRef50_B8H5D8 Cytochrome c oxidase subunit 2 n=6 Tax=Caulobacteraceae RepID=B8H5D8_CAUCN Length = 331 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 96/269 (35%), Gaps = 44/269 (16%) Query: 5 KYNKSLGWLSLFAGTVLLSGCNSA-------------LLDPKGQIGLEQRSLILTAFG-L 50 + + S A T++ +G A L ++ + Sbjct: 29 GIRRIMTGASALAATMMFAGHALAEDLMGQPTPGAIDLQPAASELKHHAIWFHDWILMPI 88 Query: 51 MLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKT 110 + + + + + + +Y + K + +SH+ +E + VP+LI++ +A+ +++ Sbjct: 89 ITAITLLVLGLLIWIVVRY--NKKANPVAAKFSHNTTIEVIWTVVPVLILMVIAIFSFRL 146 Query: 111 THALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIAT--------------------- 149 + +T++ W W + YP+Q ++ Sbjct: 147 LFHYN-----DMPKPDLTVKATGYQWYWGYEYPDQKVSEIISLPLTKEQAEAKKVPYLLA 201 Query: 150 -VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 N + P N V +VT+ V+++F +P G + A+ G A+ G + G + Sbjct: 202 ADNAMVVPVNKVVRVQVTAADVIHAFALPAFGLKTDAIPGRLNETWFKADRTGVFYGQCS 261 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 G + M + +A FD WV Sbjct: 262 ELCGVDHAFMPIEIKVV-TQAEFDAWVKA 289 >UniRef50_B8IHG8 Cytochrome c oxidase, subunit II n=2 Tax=Rhizobiales RepID=B8IHG8_METNO Length = 313 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 88/252 (34%), Gaps = 9/252 (3%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 + + + L +++ + + +GF+ +YR + + S + Sbjct: 5 WPETASTLAQRIDVIFAGLLALSGTILLLVLCLLIGFSVRYRRGSAAPRGPMPEVMSREF 64 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 E + + + +FL K + I ++VV+ W W ++ G Sbjct: 65 EIGWTSATLFLFVFLFW-----WATSVEIKAFLPPKDAIEVQVVAKQWMWKTLH-SNGAR 118 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 +NE+ P PV + S V++SFF+P + + G A + G + + A Sbjct: 119 EINELHVPIGVPVRLALRSQDVIHSFFVPAFRLKQDVVPGQLHETWFQATKLGVFHLLCA 178 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEY--F 266 Y G S M+ K I + W+A + + + AA S + Sbjct: 179 EYCGTDHSRMRGK-IVVMTPEDYAAWLAAQPEGDDLAKEGAALFVERGCSGCHAPSAKVH 237 Query: 267 SNVKPDLFADVI 278 + L+ + Sbjct: 238 APSLAGLYGRTV 249 >UniRef50_Q1NHI1 Cytochrome c oxidase, subunit IIc n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHI1_9SPHN Length = 322 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 111/304 (36%), Gaps = 36/304 (11%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCN--SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +R WL + AG L+ CN + L G R + A L + I + Sbjct: 1 MRNP---WFWLLVLAG---LTACNAEQSTLHVFGAEARAVRQM---ALLLTIGAAIIVTI 51 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW---TVPILIIIFLAVLTWKTTHALEPS 117 M V + RA SH + V+W P LI+ L + Sbjct: 52 MTVLYVRAVRAPEG------KLSHDRGMRMVLWMGAIGPTLILTALLIYALPAM------ 99 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNS 173 +P A + + V + W Y G + + NE+ P V F++T+ V++S Sbjct: 100 RPRATAPGDLVVRVDGEQFWWRVAYDPAGDLSPLLSANEVRIPVGRTVVFELTARDVIHS 159 Query: 174 FFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQ 233 F+IP L ++ + G RL + A + G Y G+ A + G + M F IA FD Sbjct: 160 FWIPGLAGKMDMIPGRTNRLVVQAEKSGRYRGVCAEFCGLSHALMAFDVIAMDT-TDFDA 218 Query: 234 WVAKAKQS-----PNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSM 288 W+ +++ + + + + + + + PDL + M G Sbjct: 219 WLRRSRAASAGAIASRGATLFDAHGCGGCHAIRGTSHDARIGPDLSRFGERRTMGAGIMP 278 Query: 289 DMTQ 292 + Sbjct: 279 PTSA 282 >UniRef50_Q06474 Cytochrome c oxidase subunit 2 n=48 Tax=root RepID=COX2_SYNY3 Length = 332 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 106/316 (33%), Gaps = 48/316 (15%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAI 59 M++ +L + L G N L+ + + + + + Sbjct: 1 MKIPGSVITLLIGVVITVVSLWYGQNHGLMPVAASADAEKVDGIFNYMMTIATGLFLLVE 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 + V ++R D P + +E + +P +I+ LAV +++ + L P Sbjct: 61 GVLVYCLIRFRRRKDDQTDGPPIEGNVPLEILWTAIPTVIVFTLAVYSFEVYNNLGGLDP 120 Query: 120 LAHDEK------------------------------------------PITIEVVSMDWK 137 + P+ ++V + + Sbjct: 121 TISRDNAGQQMAHNHMGHMGSMGNMVAMAGDGDVALGIGLDSEEQGVNPLMVDVKGIQYA 180 Query: 138 WFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197 W F YPE GI + E+ P + PV + + V+++F+IP+L + + G + L A Sbjct: 181 WIFTYPETGIIS-GELHAPIDRPVQLNMEAGDVIHAFWIPQLRLKQDVIPGRGSTLVFNA 239 Query: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAP 257 + PG Y I A G GMK +D WVA +P M + A Sbjct: 240 STPGQYPVICAELCGAYHGGMKS-VFYAHTPEEYDDWVAANAPAPTESMAMTLPKATTA- 297 Query: 258 SEYNQVEYFSNVKPDL 273 EY + ++ Sbjct: 298 --MTPNEYLAPYAKEM 311 >UniRef50_Q02BQ9 Cytochrome c oxidase subunit 2 n=3 Tax=Bacteria RepID=Q02BQ9_SOLUE Length = 332 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 12/249 (4%) Query: 33 KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSH-SNKVEAV 91 + E L+ + + FA +YR +++ P+ +H +E V Sbjct: 11 ASTLAPEVDHLLYFLLAVSTFFTLLIFGAIFYFAIRYRRRSENE--LPHVAHTGYTLEIV 68 Query: 92 VWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVN 151 +P + + + TW + KP I I V W W + +G +N Sbjct: 69 WSVIPFGLTMVM--FTWGASIFFNSRKP---PNDAIQIYAVGKQWMWKLEHM-EGQREIN 122 Query: 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYS 211 E+ P PV + S V++SFFIP ++ + G T A + G Y A Y Sbjct: 123 ELHIPVGRPVRITMASEDVIHSFFIPAFRTKQDVVPGTYTTTWFTATKTGKYHLFCAEYC 182 Query: 212 GPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 G SGM + A ++ W+ S + + + A + ++ + Sbjct: 183 GTRHSGMIGWIYVM-EPADYEAWLGGGSGSGSLADNGKKLFEQLACNNCHREDNTGRCPN 241 Query: 272 --DLFADVI 278 LF + Sbjct: 242 LVGLFGQPV 250 >UniRef50_Q2YBV3 Cytochrome c oxidase, subunit II n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YBV3_NITMU Length = 353 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 95/267 (35%), Gaps = 16/267 (5%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 L G L L+ + + IL+ V + R S+ D+ S K Sbjct: 47 FLHSYGPAATPVMHLGWLMTALLSAITLIVILLLVIAIVRKR-SSADSGMIGAESGGLKW 105 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG-- 146 + + I+ L V + + +T+ V DW W Y Sbjct: 106 VYIGTGISTFILAGLTVHFLTVL----NAVAKPTETPVLTLTVTGYDWWWNIEYEHGDPA 161 Query: 147 --IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYD 204 T NEI P PV K+ S V+++F++P L + + G+ + + A+ PG Y Sbjct: 162 KRFVTANEIHIPVGRPVLLKLKSADVIHAFWVPVLAGKTQMIPGLVNQKWIQADVPGIYA 221 Query: 205 GISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA------FEKLAAPS 258 G A + G + M + IA DR F++W +++ +S+ ++ Sbjct: 222 GQCAQFCGAAHAHMNLEVIAESDR-DFEKWQEAQRRTAFPVSEHNEHGYKLFMDRCGGCH 280 Query: 259 EYNQVEYFSNVKPDLFADVINKFMAHG 285 E PDL +A G Sbjct: 281 AVRGTEAEGLHGPDLTHLNSRGRIAAG 307 >UniRef50_UPI0001C30E64 cytochrome c oxidase, subunit II n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E64 Length = 344 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 107/301 (35%), Gaps = 28/301 (9%) Query: 1 MRLRKYNKSLGWLSLFAGTV--LLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 MR R + + A + L+ + +L + + V + Sbjct: 1 MR-RHPVAQMVIVGAIASAIGIALALVIDWFPADAAKQAGPIDTLYDVLMIVSVPVFVLV 59 Query: 59 ILMAVGFAWKYRASNK-DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 + + AW++R + + P + ++E + VP ++++ L + +E Sbjct: 60 TTVVLYCAWEFRMRPGQEQQDGPPIHGNTRLEVIWTAVPAIMLVALCSYAYAVLRDIEEK 119 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVN--EIAFPANTPVYFKVTSNSVMNSFF 175 P + + V + + W + YP++G VN + P + PV FKV + V++ F+ Sbjct: 120 HP-----DTLVVNVSAQQFAWRYSYPQEGGRPVNSTMLVLPKDRPVLFKVRAEDVIHDFW 174 Query: 176 IPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 +P +I A+ G+ T + G Y + A G G + M+ A A+FD+W+ Sbjct: 175 VPAFRVKIDAVPGITTEVRATPTRTGRYPVVCAELCGLGHAVMRSTAWVV-TPASFDRWL 233 Query: 236 AKAKQS----------------PNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVIN 279 A+ Q + + PDL + Sbjct: 234 ARQGQPTVNAGGGGESGRGGADLAAVGRDTFIASCGSCHTLADAGTSGAAGPDLTTALRG 293 Query: 280 K 280 + Sbjct: 294 Q 294 >UniRef50_B5ZEX4 Cytochrome c oxidase, subunit II n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZEX4_GLUDA Length = 321 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 79/245 (32%), Gaps = 6/245 (2%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 L + L+ + L V+ + + ++RA H + Sbjct: 2 TWLPEASSHAMRIDILLAGLVLISLAVLGLVFGLMLLNVLRFRAGRTTDIVRAIAEHKSW 61 Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI 147 + WT L +IF + W T + +P A I + V W W Y G Sbjct: 62 WFEISWTSATL-VIFFGLFLWATQLYVVAFRPPAG---AIQVYVTGKQWMWKIQY-PGGQ 116 Query: 148 ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 +N + P PV +TS V++ F IP L + + G L A + G++ Sbjct: 117 REINALHVPVGRPVQLLLTSEDVIHDFSIPALRIKHDVLPGRYQSLWFTATQTGSFRLYC 176 Query: 208 ASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFS 267 + G S M A + W+ S + A + S + ++ Sbjct: 177 TQFCGLAHSRMTGTVTVL-SAADYAGWLNGTPASGSLAMTGEALFIRSGCSGCHASSRYA 235 Query: 268 NVKPD 272 D Sbjct: 236 PDAAD 240 >UniRef50_B9KJJ8 Cytochrome c, monoheme n=5 Tax=Alphaproteobacteria RepID=B9KJJ8_RHOSK Length = 324 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 102/300 (34%), Gaps = 30/300 (10%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 +R ++ L + + +GC ++ G L+ L +++ + Sbjct: 1 MRARYRAGVGLLILTIS---AGCGGPQSVFSAGGADALQINRLFTVMLVGAVLLWLSLNG 57 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILI--IIFLAVLTWKTTHALEPSK 118 + + + P EAV+ I++ ++ ++L+W + + Sbjct: 58 LFLYV----------TRRRPGRMSRKLAEAVIIGGGIVLPLVVLTSLLSWGLSIMPDQRA 107 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQG----IATVNEIAFPANTPVYFKVTSNSVMNSF 174 P + + + ++ W Y G + + NE+ PA ++ + V++SF Sbjct: 108 PGEG----LRVRITGEEFWWRVDYYPPGSEEPVVSANELRLPAGRRTEIELLAGRVIHSF 163 Query: 175 FIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 ++P LG + + G TR+ L PG Y G A + G + M AI + A F +W Sbjct: 164 WVPGLGGKTDMIPGRTTRMSLEPVTPGIYRGQCAEFCGASHALMAMNAIVL-EEAEFARW 222 Query: 235 VAKAKQSPNTMSDMAAF----EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDM 290 + E A V PDL +A G Sbjct: 223 LEAEAGPARAPEGEGRAIFLREGCGACHAVRGTPAAGVVGPDLTHIGSRTTLAAGILPME 282 >UniRef50_Q31JY7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechococcus elongatus RepID=Q31JY7_SYNE7 Length = 315 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 91/292 (31%), Gaps = 44/292 (15%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAI 59 M + +L L G N LL L T + + + Sbjct: 1 MAIPSNILTLLAGVAITCLSLWYGQNHGLLPVAAATDAPLVDGLFNTMMTIATGLFLLVQ 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK- 118 + W++R D + + +E + +P++I++ L+V ++ + Sbjct: 61 GLIFVILWRFRRKPNDVTDAAPIHGNLALEILWTGIPVVIVLGLSVYSFSVYTTMGGLSV 120 Query: 119 ----------------------------------------PLAHDEKPITIEVVSMDWKW 138 +T+ V + + W Sbjct: 121 GHGGGHMAHAQPRDSAIAAELSSDSLQDSKSTPRVSAGLGAPTEALPDVTVNVKGLQFAW 180 Query: 139 FFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIAN 198 F YP + E+ P V ++ + V+++F++P+ + A+ G +TRL Sbjct: 181 IFNYPSHNLI-AGELHLPLGKSVQLEIEAQDVIHAFWVPQFRLKQDAIPGERTRLQFTPT 239 Query: 199 EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAA 250 + GTY + A G M+ + I +D+W+ + + Sbjct: 240 QLGTYPIVCAELCGSYHGAMRSQVIVE-TPEDYDRWIQSQTTTAAVVPSRLE 290 >UniRef50_Q03736 Cytochrome c oxidase subunit 2 n=11 Tax=Rhodobacteraceae RepID=COX2_RHOSH Length = 303 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 46/259 (17%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 + + + L ++ + I L+ + W++ ++H+ Sbjct: 40 GTGFQPSASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNK--VPARFTHN 97 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 + +E VPI+I++ + + + E +T++V W W + YP++ Sbjct: 98 SPLEIAWTIVPIVILVAIGAFSLPVLFNQQ-----EIPEADVTVKVTGYQWYWGYEYPDE 152 Query: 146 GIA--------------------------------------TVNEIAFPANTPVYFKVTS 167 I+ T + P N V +VT Sbjct: 153 EISFESYMIGSPATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQVTG 212 Query: 168 NSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPD 227 V++S+ +P G + A+ G +L A G + G + G + M Sbjct: 213 ADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVV-S 271 Query: 228 RAAFDQWVAKAKQSPNTMS 246 A+ W+ +A+ +S Sbjct: 272 EEAYAAWLEQARGGTYELS 290 >UniRef50_C1VBF5 Cytochrome c oxidase subunit 2 n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VBF5_9EURY Length = 254 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 90/237 (37%), Gaps = 10/237 (4%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 K+ L ++L+ + L + + + + + Sbjct: 2 RKTRLALVSVFSVLILALFADPVAAQASASAELINDLNSRLLYVAFPITLLVEFILLYAV 61 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTVP-ILIIIFLAVLTWKTTHALEPSKPLAHD-- 123 K+R +P + N+ + WTV +I++F+ V ++ + + Sbjct: 62 VKFR-----NNDNPLPTKENRRLEITWTVATAIILLFVGVASYGVLADDNVTHQPEEELQ 116 Query: 124 EKPITIEVVSMDWKWFFIYPEQG-IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 P+ + + W W YPE G T EI P + PV F+VTS V++ F +P++G + Sbjct: 117 GDPVVVHAEAYQWGWEMSYPEDGNFTTGTEIVVPKDRPVVFEVTSRDVIHGFHVPKMGMK 176 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAK 239 AM G + + E TY G Y G S M F + + W+++ + Sbjct: 177 TDAMPGQINTVKTVPYEEDTYQGYCTEYCGVAHSQMYFSVEVV-SQEEYQTWLSEQQ 232 >UniRef50_Q47R64 Cytochrome c oxidase subunit 2 n=4 Tax=Streptosporangineae RepID=Q47R64_THEFY Length = 314 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 96/267 (35%), Gaps = 31/267 (11%) Query: 23 SGCNS------ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA 76 +GC S L +P + +L ++ V I + + YR + Sbjct: 31 TGCASNEFTRLGLPEPITEQAERVVTLWQGSWVAAFAVGILVWGLIIWSVIAYRKRS--E 88 Query: 77 KYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDW 136 + P ++ +EA+ +PI+++ L T + + + + ++V + W Sbjct: 89 QLPPQVRYNMPIEALYTVLPIIVVSVLFYFTAR----DQTYLLETDEPADVYVDVNAFQW 144 Query: 137 KWFFIYPEQGIATVNE----------------IAFPANTPVYFKVTSNSVMNSFFIPRLG 180 W F Y ++ N + P+++ V+F + + V++SF+IP Sbjct: 145 SWQFTYEDELDVNGNPVSVAGVPSTSKDELPVLVLPSDSVVHFDLEAPDVIHSFWIPAFA 204 Query: 181 SQIYAMAGMQT--RLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 ++ + G ++ + G Y+G A G S M F + W+ + Sbjct: 205 FKLDVIPGHPNEFQVKIKPGVEGDYEGRCAELCGYDHSRMLFTLRVV-TPEEYRAWIEEQ 263 Query: 239 KQSPNTMSDMAAFEKLAAPSEYNQVEY 265 K +P + + E+ A Sbjct: 264 KANPQELPAVPDLEEEAPAPNPGPATA 290 >UniRef50_A8LTQ3 Cytochrome c oxidase subunit II n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LTQ3_DINSH Length = 345 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 99/313 (31%), Gaps = 40/313 (12%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 + + L+P G L + + V + + FAW + Sbjct: 44 WNSQSALEPSGLGAAAAYDLTIGMVVGLGAVFVVVMA-IAWFAWHSKRPAGH-------- 94 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 +I +A+ T + IEV + W +Y Sbjct: 95 -------WWVWTGGVITPLIAISTVMVASTAALVATTRPAPDALVIEVTGYQFWWDVVYD 147 Query: 144 EQG--IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPG 201 G + NE+ P PV ++ SN V++SF++P + ++ + G L + A E G Sbjct: 148 PDGTPLRDANELILPEGRPVTLRLNSNDVIHSFWVPSISGKMDMIPGRTNTLTITATETG 207 Query: 202 TYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE--------K 253 + G A + G M F+ P AFD+W+A + + ++ A E Sbjct: 208 QFRGQCAEFCGLSHPKMAFEVTVLP-PEAFDKWLATTRGAARDVARPAQAEGREVFLSAG 266 Query: 254 LAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMD------------MTQPEGEHSAHE 301 AA E V + PDL + G G Sbjct: 267 CAACHEIRGVAEGGRLGPDLTRLGARASLGAGMWRMNQGNVAGWIADVQDMKPGAQMPSY 326 Query: 302 G-MEGMDMSHAES 313 + G D+ + + Sbjct: 327 NHLSGPDLRNLSA 339 >UniRef50_D0LJA9 Cytochrome c oxidase subunit 2 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJA9_HALO1 Length = 358 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 91/295 (30%), Gaps = 38/295 (12%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 L D S+ F L + I + V F KYRA P+ H+ Sbjct: 29 TVWLPDAASVTSPAVDSMWDIVFWLSVFCFIAITGVVVYFVIKYRARPGHKAQ-PSPHHN 87 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 + +E + +P LI + L + W+ + + E + ++VV+ W W F++P Sbjct: 88 DVMETIWTVIPALICVGLFIGGWRGFVDV-----TSPPEHALEVQVVARSWSWEFVHP-- 140 Query: 146 GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA-------- 197 + + PA+ V + S V++SFF+P + + T+ A Sbjct: 141 NGVKDSVLHVPADRSVRLIMKSEDVIHSFFVPAFRIKQDVLPRRYTQTWFKAPDPTLSRE 200 Query: 198 -----------------NEPGTYDGISASYSGPGFSGMKFKAIATPD--RAAFDQWVAKA 238 +PG Y G S MK + + + + + Sbjct: 201 QELPSTEVNPANAKLVREQPGL-RVFCTEYCGREHSMMKTRVVVHNSGGYENYLAFKQEQ 259 Query: 239 KQSPNTMSDMAA--FEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 + + + + A + + N MD Sbjct: 260 QDAMSPLERGQDVYGRLCFACHTVDGSVRVGPSFQGAWGTSRNFTDGTSAPMDEN 314 >UniRef50_A6C0L0 Cytochrome c oxidase subunit 2 n=2 Tax=Planctomyces RepID=A6C0L0_9PLAN Length = 277 Score = 181 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 19/237 (8%) Query: 31 DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEA 90 +G+ SL + +V + + V W R++N + + ++K+E Sbjct: 36 QAASNLGIRIDSLFYLILAITALVFVGTQAVLVYALW--RSANNRDERAQYIHGNHKLEL 93 Query: 91 VVWTVPILIIIFLAVLTWKTT--HALEPSKPLAHDEKPITIEVVSMDWKWFFIYP----- 143 + +P I++FLA+ + P A + P+ EV + ++W F YP Sbjct: 94 IWSIIPGAILLFLALYQMNLWADFRFKNHYPEAAVKDPLA-EVTARQFEWRFRYPAIGKQ 152 Query: 144 ------EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197 + TVNE+ P PV ++ S+ V +SFF+P L + A+ G+Q + A Sbjct: 153 LQPKPQPDDLYTVNELHVPFGKPVLIQLRSDDVQHSFFLPALRIKQDALPGLQIPVWFEA 212 Query: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK--AKQSPNTMSDMAAFE 252 N+PG YD + A G G MK I P+ A + ++ +QS + + +AA E Sbjct: 213 NKPGVYDLVCAELCGWGHYKMKAHVIVQPE-AEYQAYLKNLTQQQSYDGLGKIAANE 268 >UniRef50_Q1RI44 Probable cytochrome c oxidase subunit 2 n=19 Tax=cellular organisms RepID=COX2_RICBR Length = 269 Score = 181 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 94/269 (34%), Gaps = 37/269 (13%) Query: 13 LSLFAGTVLLSGC--------NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 ++L + S C P I E + +V+ + V Sbjct: 8 ITLIGLVLFSSFCFASEPLPWQMGFQPPASPIMEELHKFHDFLLYISTAIVLFVAGLLVF 67 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 K+ A N +SH+ +E + +PI+I++ +AV +++ E E Sbjct: 68 VCIKFNARNN--PVPAKFSHNILIEIIWTVIPIIILVIIAVPSFRILRHAEKI-----PE 120 Query: 125 KPITIEVVSMDWKWFFIYPEQG---------------------IATVNEIAFPANTPVYF 163 +TI+VV W W +IYP+ + N I P N V F Sbjct: 121 ADLTIKVVGYQWYWHYIYPDHNDIEFDSVMISDENLKPDQKRLLDVDNRIVIPENATVRF 180 Query: 164 KVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAI 223 +T++ V++SF +P LG +I A+ G + G Y G + G M Sbjct: 181 LITASDVIHSFAVPSLGFKIDAVPGRVNETWTRVAKKGVYYGQCSELCGINHGFMPIAIE 240 Query: 224 ATPDRAAFDQWVAKAKQSPNTMSDMAAFE 252 + FD WVA + + Sbjct: 241 VV-SKEDFDNWVASKNKVAANGENSKLAA 268 >UniRef50_Q2J8B8 Cytochrome c oxidase subunit 2 n=4 Tax=Frankia RepID=Q2J8B8_FRASC Length = 316 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 93/262 (35%), Gaps = 26/262 (9%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSALLD-PKGQIGL--EQRSLILTAFGLMLIVVIPA 58 LR+ + L++ + + C+ P+G ++ + L V + Sbjct: 45 PLRRVLRLGAVLAVVGI--MATACDRPTFGYPRGVTNQTPRLLNIWQGSAIAALAVGVLV 102 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 M +R + ++ VE + VP++I+ L T + E Sbjct: 103 WGMIFYAIIAFRKRS--DVLPRQVRYNLPVEVLYTVVPVVIVAGLFFYTAR----DESEV 156 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPEQG--------------IATVNEIAFPANTPVYFK 164 + +T++V++ W W F Y + G + P N + F Sbjct: 157 TKLSPKPDVTVDVIAFRWNWQFKYLDTGSGRQGANPIEVTGRPGEPAVLVLPQNRSIRFV 216 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIA 224 +S V++SF++P + + G + L + GT+ G A G M F Sbjct: 217 ESSPDVIHSFWVPEFLFKRDVIPGRVNQFELTITKTGTFIGRCAELCGTDHDRMNFYVKV 276 Query: 225 TPDRAAFDQWVAKAKQSPNTMS 246 P +A +D ++A + + + Sbjct: 277 VP-QAEYDTFIADRENVAISAA 297 >UniRef50_B1M0S7 Cytochrome c oxidase, subunit II n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M0S7_METRJ Length = 329 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 12/253 (4%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 E LIL L L++ +P + FA +YR ++ + SP+ SN + Sbjct: 11 WPAAVSATASETDLLILAFTVLTLLLTVPVFVAITYFALRYREGSEADR-SPSGIRSNLI 69 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 E +P L+ + V + + P + +E + W W F +P G + Sbjct: 70 EISWMLIPFLLTLIFFVWGARLFIQSKNPPP-----DAMVVEAIGRQWMWKFQHPT-GQS 123 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 +N + P P+ + S V+++ ++P + Q+ A+ T L A++ GTY + Sbjct: 124 EINNLHLPIGQPIRLHIISQDVIHALYLPAVRMQVAALPDRYTDLWFKADKVGTYHLYCS 183 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKA-KQSPNTMSDMAAFEK--LAAPSEYNQVEY 265 Y G S M + + + W+ A Q + A +E A E Sbjct: 184 EYCGTDHSVMGGEVTFM-NPGDYQDWLTHAGAQQGKVAAGRALYEAYGCAGCHEPGSPVK 242 Query: 266 FSNVKPDLFADVI 278 ++ L+ + Sbjct: 243 APSLA-GLYGSQV 254 >UniRef50_C6W9F6 Cytochrome c oxidase subunit 2 n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6W9F6_ACTMD Length = 311 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 36/313 (11%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNS------ALLDPKGQIGLEQRSLILTAFGLMLIVV 55 R + K G + L +GC++ R L + L+V Sbjct: 8 RAARLAKVTGLVGLVGIG--ATGCSTDEVLRFGWPVSVTPQAEAMRELWTWSVVAALVVG 65 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + + +R K + +++ +E V+ VP +I+ L T T + + Sbjct: 66 VIVWGLILWAVAFHR--KKSEELPRQVAYNLPLELVLIVVPTVIVAVLFYFTAVTQNYVT 123 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA-------------TVNEIAFPANTPVY 162 + +T++V+ W W F + + + + + PA V Sbjct: 124 DK----SQDPDVTVDVIGFQWNWEFQHRDAKVEGTDQPVSTVGTSTEIPMLVLPAEKRVR 179 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMA-----GMQTRLHL-IANEPGTYDGISASYSGPGFS 216 F + S V++SFF+P + + + PG++ G A G + Sbjct: 180 FVLRSTDVIHSFFVPEFHFKRDVFPEPEKNNQDNVFQIDQIDRPGSFVGRCAELCGTYHA 239 Query: 217 GMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQ--VEYFSNVKPDLF 274 M F+ A P A +D+++ Q + + Y +P Sbjct: 240 VMNFEVRALP-AADYDRYIELRTQVNEATGKPYTNAEALTEMNCGELCTPYAVTTQPFDT 298 Query: 275 ADVINKFMAHGKS 287 + G Sbjct: 299 DRTAREASGAGSK 311 >UniRef50_B0RXK0 Cytochrome c oxidase subunit 2 n=13 Tax=Gammaproteobacteria RepID=B0RXK0_XANCB Length = 327 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 96/266 (36%), Gaps = 51/266 (19%) Query: 17 AGTVLLSGCNSALLDPKGQ-------------IGLEQRSLILTAFGLMLIVVIPAILMAV 63 + + L+G SA + A + +++ Sbjct: 16 SAVLALAGAPSAWAQSADPKEWQLNMGRGVTQTARMAYEAHMVALWVCVVIGALVFGAMG 75 Query: 64 GFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD 123 +K+R S + +SH+ K E + +P+L++I +A A+ ++ Sbjct: 76 YAIFKFRKSKGA--VAAQFSHNTKAEVLWTVIPVLVLIAMAWPATAKLIAMYDTR----- 128 Query: 124 EKPITIEVVSMDWKWFFIYPEQGIA------------------------------TVNEI 153 E +T++V W W + Y QG+ N + Sbjct: 129 ESEMTVKVTGYQWMWKYEYLGQGVEFTSRLARESDRIRQSGERPTAASQPHYLLDVDNRL 188 Query: 154 AFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGP 213 P +T + F +T++ V++++++P LG + A+ G+ +PG Y G A G Sbjct: 189 VLPVDTKIRFVITADDVIHAWWVPALGWKQDAIPGIVNEAWTNIEKPGVYRGQCAELCGK 248 Query: 214 GFSGMKFKAIATPDRAAFDQWVAKAK 239 M A P +A F +W+A + Sbjct: 249 DHGFMPIVVEALP-KAEFQRWLASRR 273 >UniRef50_C5CCB5 Cytochrome c oxidase subunit 2 n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CCB5_MICLC Length = 286 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 35/255 (13%) Query: 17 AGTVLLSGCNSALLDPKGQ-------IGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 ++L+GC++ + + L + ++ ++V + A + Y Sbjct: 4 TALLVLTGCSAEVQRGWYPGTRDTTNHNAQLTDLWVNSWIAAMVVGLLAWGAMIWCMVAY 63 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R D + +++ +E + +PIL+++ T + ++ D+ P+T+ Sbjct: 64 RRRKNDQGFPKQTAYNVPLETMFTAIPILMVVTFWGFTNRVQTEVD----RPVDDSPLTV 119 Query: 130 EVVSMDWKWFFIYPEQG-----------------------IATVNEIAFPANTPVYFKVT 166 V W W F Y + T+ + P + PV+F++ Sbjct: 120 TVYGKQWSWDFNYSYEQENGEVIEAHYSGIQAQLDGTEGVRDTLPVLYLPNDVPVHFELK 179 Query: 167 SNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATP 226 S V +SF+IP+ + + G L+L E G+YDG A G S M F Sbjct: 180 SRDVAHSFWIPQFLQKRDMVPGKTNHLYLTPQELGSYDGKCAELCGESHSEMLFNVEVV- 238 Query: 227 DRAAFDQWVAKAKQS 241 D A F Q + + + Sbjct: 239 DEAEFVQRLEEMEPG 253 >UniRef50_C6B8H8 Cytochrome c oxidase, subunit II n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B8H8_RHILS Length = 318 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 92/246 (37%), Gaps = 10/246 (4%) Query: 28 ALLDP--KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 A L P + + L+L + P ++ + FA KYR + P Sbjct: 6 AFLMPVESSTYSQQVDIFAIAFSALILAMAGPVFILIIVFAIKYRRGKPANRVHP-PKRD 64 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 ++E +P L + L W T P + I+VV+ W W F + + Sbjct: 65 LRLELSWSILPSLCL--LGFFGWSTALFATRYFP---PANALDIDVVAKQWMWKFQH-PE 118 Query: 146 GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDG 205 G +NE+ P + PV + S V++S F+P L + + G T + ++ GT+ Sbjct: 119 GQGEINELHVPVDQPVKLTMASQDVIHSLFVPALRLKQDVVPGRYTVMWFTPDKVGTFRL 178 Query: 206 ISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEY 265 A + G S M + I A + +W+++ + AA + S + Sbjct: 179 TCAEFCGTDHSEMGGQII-VTTHAQYSRWLSRFSVDQTLAAAGAALFRSHGCSGCHDPSA 237 Query: 266 FSNVKP 271 + Sbjct: 238 SVHAPK 243 >UniRef50_Q3JBQ1 Cytochrome c oxidase subunit 2 n=2 Tax=Nitrosococcus oceani RepID=Q3JBQ1_NITOC Length = 211 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 84/211 (39%), Gaps = 6/211 (2%) Query: 27 SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSN 86 + L + +L L F L +V I + + FA KYR K +++ S Sbjct: 6 GSFLGEASSLSRHFDTLFLALFILCSLVTIIITFLIIFFAVKYRRGAKVNRFT--VRKST 63 Query: 87 KVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 +E V +P +FLA+ W E P + + I VV W W + G Sbjct: 64 AIEFVWTLIPFG--LFLAIFVWAAYFYTELLFPPDDEMVDLDIAVVGKQWMWKLQH-PNG 120 Query: 147 IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 +N++ P + + S V++SFFIP + + G + + + G Y Sbjct: 121 KREINKLHVPLGKNIRLTMVSQDVIHSFFIPAFRIKHDVLPGRYSTIWFRPIKLGEYHLF 180 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 A Y G S M+ K + + + + QW+ + Sbjct: 181 CAEYCGTDHSRMRGKVVVM-EPSDYAQWLQQ 210 >UniRef50_D1BTQ6 Cytochrome c oxidase subunit 2 n=2 Tax=Micrococcineae RepID=D1BTQ6_XYLCX Length = 304 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 97/287 (33%), Gaps = 43/287 (14%) Query: 5 KYNKSLGWLSLFAGTV--LLSGCNSALLD-------PKGQIG---LEQRSLILTAFGLML 52 + +++ + AG V L SGC S + G++ SL + ++ L Sbjct: 8 RATRAILRATAIAGAVAVLASGCASDTVKRGYLPGYADGEVTNRTEGITSLWVGSWVAAL 67 Query: 53 IVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTH 112 V + + + YR D + + +E + VP+ +++ L T + Sbjct: 68 AVGLITWGLMLWCVAAYRKRRDDDQLPVQTRYHVPLELMYVIVPLAMVLVLFYHTDRVMT 127 Query: 113 ALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGI------------------------- 147 + E + ++V+ W W F Y + G+ Sbjct: 128 EVTSV----SGEADVHVQVIGKQWSWDFNYLDDGVYDTGQHLIDVGGQTAEDQLDGAPGT 183 Query: 148 -ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 + + P V F + S V++SF+IP + + G ++ GTY G Sbjct: 184 STALPTLYLPVGETVEFTLDSRDVIHSFWIPAFLYKQDMIPGHTNTFEVVPEREGTYAGK 243 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEK 253 A G SGM F RA +D + + + T + Sbjct: 244 CAELCGQWHSGMLFNVKVV-SRAEYDARMDELRALGQTGELGLDLNR 289 >UniRef50_Q2JUD7 Cytochrome c oxidase subunit 2 n=2 Tax=Synechococcus RepID=Q2JUD7_SYNJA Length = 342 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 90/272 (33%), Gaps = 36/272 (13%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAI 59 M +G L L G N LL SL + + + + Sbjct: 1 MSALSNIILVGIGVLLTLASLWYGQNHHLLPEAAANSAPLFDSLFNSTITIATGIFLVVE 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT-------- 111 + + A +YR D + +E V VP +II++L + + Sbjct: 61 GVLLYCAIRYRKRRGDRGDGDPNHGNVLLEIVWTAVPAVIILWLGLASLDVYQAVYGGAD 120 Query: 112 -------------------------HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 + + + ++V M + W F YPE G Sbjct: 121 VGGHIHTAMAMEPSQDSAAGDPDYAYTPALLPGKEMGQPELVVQVQGMQYAWVFTYPESG 180 Query: 147 IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGI 206 + E+ P N V +T+ V ++F++P+ + + G +T L + + GTY + Sbjct: 181 L-VAGELHLPLNKRVRLNMTALDVNHAFWVPQFRLKQDLIPGRETHLEFVPTQLGTYPIV 239 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 A GP M + I F++W + Sbjct: 240 CAELCGPYHGVMAGQLIVE-TPEEFERWQQEQ 270 >UniRef50_Q0C3D3 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C3D3_HYPNA Length = 322 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 88/274 (32%), Gaps = 63/274 (22%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 + +I ++ + + + + + +Y + K K S +SH+ Sbjct: 28 NMQPAATRIAERVHDFHNVLLVIITAITLLVLALIIWIVVRY--NQKANKVSRKFSHNTM 85 Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHAL-----------------------------EPSK 118 +E V VP LI++ +A L++ + + Sbjct: 86 IEVVWTVVPALILVGIAGLSFPNLYYQNVTPNLGQIVATSKQLLADGKSAEHQAYTQNYF 145 Query: 119 PLAHDEKPITIEVVSMDWKWFFIYPE-------------------------------QGI 147 P A +E I +++ W W + Y + + + Sbjct: 146 PDAAEEGFINVKIQGNQWNWTYTYADIVDDAGIPVEFVSNGLHKGTSRDADAPAGALRLL 205 Query: 148 ATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGIS 207 AT + P + V F + V++S+ +P ++ A+ G + EPG Y G Sbjct: 206 ATDYPMVVPEDRYVRFYTAAADVIHSWAVPSFAVKVDAIPGRLNEGWFLVKEPGVYYGQC 265 Query: 208 ASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 + G + M + +A FD W K Sbjct: 266 SELCGVDHAFMPIEVRVV-SQAQFDAWAEMMKAG 298 >UniRef50_Q9B8D8 Cytochrome c oxidase subunit 2 n=150 Tax=Eukaryota RepID=COX2_CANAL Length = 262 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 82/239 (34%), Gaps = 35/239 (14%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 L D L + +++ + Y+ + KY H + Sbjct: 14 LQDSATPNAEGIHELYDHIMFYLCLILGLVSYILYVIIKDYKDNRFAYKY---VRHGQVI 70 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ--- 145 E + P +I++ +A ++ + + +TI+V+ + W W + Y + Sbjct: 71 EIIWTIFPAVILLLIAFPSFILLYLCDEVL-----TPAMTIKVIGLQWYWKYEYSDFVDS 125 Query: 146 -----------------------GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 + T I P +T + F VT+N V++SF IP LG + Sbjct: 126 IGETIEFESYVIPDDMLEPGALRLLDTDTSIVVPVDTHIRFVVTANDVIHSFTIPSLGMK 185 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 I A G ++ + G Y G + G M K F +W+ + + S Sbjct: 186 IDATPGRLNQVSALIQRTGVYYGQCSELCGVNHGMMPIKLECV-SIEDFIEWLGENEVS 243 >UniRef50_D2UBE6 Putative cytochrome c oxidase, subunit II protein n=1 Tax=Xanthomonas albilineans RepID=D2UBE6_XANAL Length = 330 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 46/268 (17%) Query: 10 LGWLSLFAGTVLLSGCNSALLDPK--------GQIGLEQRSLILTAFGLMLIVVIPAILM 61 G + T L+ +A P Q + + A + +++ + Sbjct: 14 AGMALVAVVTAPLAWAQAADPKPWQLNMGRGVTQSAHNAYAAHMLALWVCVVIGVLVFGA 73 Query: 62 AVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLA 121 + +R S ++H+ K E V +P+LI+I +A A+ ++ Sbjct: 74 MAYALFTFRKSKGV--VPAQFTHNTKAEIVWTVIPVLILIVMAWPATAKLIAMYDTR--- 128 Query: 122 HDEKPITIEVVSMDWKWFFIYPEQGIA------------------------------TVN 151 + +T+++ W W + Y + ++ N Sbjct: 129 --DAEMTVKITGYQWMWRYEYLGENVSFTSRLARSSDRMRQSGAVPTVEHDPHYLLDVDN 186 Query: 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYS 211 + P NT V F +T++ V++++++P LG + A+ G+ + PG Y G A Sbjct: 187 RLVLPVNTKVRFLITADDVIHAWWVPALGWKQDAIPGIVNEAWTSIDTPGVYRGQCAVLC 246 Query: 212 GPGFSGMKFKAIATPDRAAFDQWVAKAK 239 G M A + F +W+A K Sbjct: 247 GKDHGFMPIVVEAMNKQ-DFRKWLASRK 273 >UniRef50_A5VD54 Cytochrome c oxidase subunit 2 n=3 Tax=Alphaproteobacteria RepID=A5VD54_SPHWW Length = 338 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 84/229 (36%), Gaps = 31/229 (13%) Query: 30 LDPKGQIGLEQRSLILTAFG-LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 ++G + L + ++ ++ I +++ ++RA SH+ + Sbjct: 68 QPQVTKVGQDAEWLHNSLLMPIITVISIFVLILIGYVVIRFRAK--ANPVPSKTSHNTLI 125 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA 148 E V VP+LI++ +AV + + + A + +TI+V+ W W + YP+ G Sbjct: 126 EIVWTLVPVLILLVIAVPSIRLL-----AHQYAQPKPDLTIKVIGNQWYWTYQYPDNGDF 180 Query: 149 TVNEIAFP------ANTPVYF----------------KVTSNSVMNSFFIPRLGSQIYAM 186 + P P VTSN V++S+ +P +++ A+ Sbjct: 181 ELVSNMLPDAEAKKRGEPRMLAVDERVVVPVDAVVKVIVTSNDVIHSWAVPAFWTKMDAV 240 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV 235 G A G Y G + G M + F +WV Sbjct: 241 PGRLNETWFKAEREGLYYGQCSELCGARHGFMPIAVEVV-SKDKFAEWV 288 >UniRef50_D2R8Q4 Cytochrome c oxidase, subunit II n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R8Q4_9PLAN Length = 269 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 12/248 (4%) Query: 13 LSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 + +A L L + G +L + L I+ + + F WKY + Sbjct: 19 IFAWAMADLWPLQGHWLPENINDHGKVIDNLFMFILYLTGIIFVGTGVALFWFLWKYDVA 78 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP--LAHDEKPITIE 130 S+ +E V +P ++F+A+ + +P KP E Sbjct: 79 TNTKPIE-YTHGSHTLEVVWSIIPAAALLFIAIYQMNAWADAKMRRPQLADGSPKPAIAE 137 Query: 131 VVSMDWKWFFIY--------PEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 V ++W Y + TVNE+ PAN + + S V++SFF+P L + Sbjct: 138 VTGRQFEWRIRYAGADGVVGTPDDVLTVNELRVPANEEIVLAIKSQDVLHSFFLPNLRLK 197 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 + GM+ + AN+ G YD + A G G M+ + RA FD+W+A+A + Sbjct: 198 QDVVPGMKQFVWFRANKTGVYDIVCAELCGWGHYKMRGRIT-VQSRADFDEWLAQAYRDQ 256 Query: 243 NTMSDMAA 250 N A Sbjct: 257 NVAEFTAE 264 >UniRef50_O78682 Cytochrome c oxidase subunit 2 n=572 Tax=cellular organisms RepID=COX2_CARAU Length = 230 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 85/230 (36%), Gaps = 34/230 (14%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 D + E A ++ ++ + + + + S Sbjct: 6 QLGFQDAASPVMEELLHFHDHALMIVFLISTLVLYIIIAMV-------STKLTNKYILDS 58 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 ++E V +P +I++ +A+ + + + ++ ++ +TI+ + W W + Y + Sbjct: 59 QEIEIVWTILPAVILVLIALPSLRILYLMD-----EINDPHLTIKAMGHQWYWSYEYTDY 113 Query: 146 G---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 + T + + P +PV V++ V++S+ +P LG ++ Sbjct: 114 ENLGFDSYMVPTQDLAPGQFRLLETDHRMVVPMESPVRILVSAEDVLHSWAVPSLGVKMD 173 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQW 234 A+ G + IA+ PG + G + G S M A P F+ W Sbjct: 174 AVPGRLNQTAFIASRPGVFYGQCSEICGANHSFMPIVVEAVP-LEHFENW 222 >UniRef50_Q9MGB5 Cytochrome c oxidase subunit 2 n=19 Tax=Eukaryota RepID=Q9MGB5_9STRA Length = 273 Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 89/260 (34%), Gaps = 41/260 (15%) Query: 9 SLGWLSLFAGTVLLSGCNSAL------LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 L +L +S C+++ DP I ++++ I + Sbjct: 15 FLIFLLTVNLFSFISFCDASFDWQIGFQDPATPIAEGIILFHNYLMSFIVLICILVFYVL 74 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAH 122 + +S + N++ N +E V P +I++FLA+ ++ ++L+ Sbjct: 75 YFIIDSFNSSKVSK--ASNFTDFNLLEIVWTLFPAIILLFLAIPSFTLLYSLD-----EL 127 Query: 123 DEKPITIEVVSMDWKWFFIYPEQG---------------------------IATVNEIAF 155 + +T++++ W W + Y + + N + Sbjct: 128 IDPDLTLKIIGHQWYWTYEYSDFSSMTNGESINFDSYMVSSNDLIKGGFRLLEVDNRVIL 187 Query: 156 PANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGF 215 P T + +T+ V++ + +P G ++ A G ++ L G Y G + G Sbjct: 188 PVLTHIRLLITAADVIHCWTVPSFGVKVDACPGRLSQASLFIKREGLYFGQCSEICGVNH 247 Query: 216 SGMKFKAIATPDRAAFDQWV 235 M + F WV Sbjct: 248 GFMPIAVKSVSS-DNFLTWV 266 >UniRef50_A0LTG9 Cytochrome c oxidase subunit 2 n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTG9_ACIC1 Length = 280 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 85/267 (31%), Gaps = 30/267 (11%) Query: 4 RKYNKSLGWLSLFAGTVLLSGCNSALLD------PKGQIGLEQRSLILTAFGLMLIVVIP 57 R+ + + L A L SGC + L P L + L V Sbjct: 20 RRRSVVVRIGLLVALVGLTSGCTANDLPRLGMPTPITAQAQRVLRLWQGGWAAALFVGCI 79 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 + + YR + +P +++ +E + VP++ + T + E Sbjct: 80 VWGLIIWCVIAYRKRDGAQ--APQTTYNVPIEVLYTVVPVIFVAVFFYFTAR----DENY 133 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVN---------------EIAFPANTPVY 162 +T+EVV W W F Y + PA V Sbjct: 134 VTKLSAHPDVTVEVVGYQWDWQFNYLSGPQPDAPIVAQVTGDAAHGHPATLELPAGETVR 193 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMAGMQTR--LHLIANEPGTYDGISASYSGPGFSGMKF 220 FK+ S V+++F++P + + G + +H+ A++ GTY G G M F Sbjct: 194 FKLVSPDVIHAFWVPNFLFKRDVIPGRMSEFDVHIDADKQGTYIGRCTELCGLYHDQMIF 253 Query: 221 KAIATPDRAAFDQWVAKAKQSPNTMSD 247 D + + K Sbjct: 254 YVKVV-DPVTYQHDLETMKAQYAAGGA 279 >UniRef50_B8ES67 Cytochrome c oxidase, subunit II n=1 Tax=Methylocella silvestris BL2 RepID=B8ES67_METSB Length = 318 Score = 176 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 93/306 (30%), Gaps = 32/306 (10%) Query: 34 GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVW 93 G L L + IV + L+ +G ++ RA A V+ Sbjct: 13 GARALAILPLTKGMIAISSIVTLVVALLLLGAIFRSRA----AFDPRGLVQDTGPLRWVY 68 Query: 94 TVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY-----PEQGIA 148 L + LA + T + E +++EV W W Y P Sbjct: 69 LGAALTVAALAGVLVWTM-TTMAAAVRTGPEAALSLEVTGRQWWWEVRYLDRAHPSNIFT 127 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISA 208 T NEI P V + V +SF++P LG + + G L A++ G+Y G + Sbjct: 128 TANEIHIPIGKFVRVDLRGGDVSHSFWVPALGGKTDMIPGQVNTTWLQADKVGSYRGQCS 187 Query: 209 SYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE---------KLAAPSE 259 Y G + M F IA A F+ W +S + + A Sbjct: 188 EYCGKQHAHMAFTVIAE-SEAQFEAWRTAQLRSVAPADPEPSASAEGRATFQTRCGACHT 246 Query: 260 YNQVEYFSNVKPDLFADVINKFMAHGKSM------------DMTQPEGEHSAHEGMEGMD 307 V PDL + +A G G M G + Sbjct: 247 VRGTSAGGRVGPDLTHVMSRGTIAAGTLPNTLGSLAGWVADPQHLKPGAKMPVLEMSGPE 306 Query: 308 MSHAES 313 + + Sbjct: 307 IHSVTA 312 >UniRef50_B8EPK1 Cytochrome c oxidase subunit 2 n=1 Tax=Methylocella silvestris BL2 RepID=B8EPK1_METSB Length = 303 Score = 176 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 81/235 (34%), Gaps = 32/235 (13%) Query: 31 DPKGQIGLEQRSLILTAFG-LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVE 89 + I E + +++ + + + + +Y + + +H++ +E Sbjct: 52 EAVTPIAHEMHAFHDFILLPIIVGICLFVLALLGWIYIRY--NENKNPVATTTTHNSLLE 109 Query: 90 AVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--- 146 +P++I++ +A+ +++ + L IT++ W W + YP+ Sbjct: 110 VAWTVLPVMILVIIAIPSFRLL-----THQLVIPPADITVKATGKQWFWTYDYPKDQGGG 164 Query: 147 --------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 ++ NE P V+ VT V++SF IP G +I A+ Sbjct: 165 FSFDSYLIPESDLKPGDIRQLSVDNEAVVPVGKVVHMLVTGADVIHSFTIPSFGIRIDAV 224 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 G A G Y G + G + M + W+ A + Sbjct: 225 PGRMNETWFKAEREGIYYGQCSKLCGKDHAYMPIAIRVV-SPETYSAWLVSAAKK 278 >UniRef50_A4FAC2 Cytochrome c oxidase subunit 2 n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FAC2_SACEN Length = 302 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 96/294 (32%), Gaps = 35/294 (11%) Query: 3 LRKYNKSLGWLSLFAGTVLLSGCNS------ALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 + + K G + L +GC + R L + L V + Sbjct: 1 MPRLVKVTGLIGLVGVA--ATGCTTNEVLRFGWPQGVTPQAESMRQLWTWSVIAALAVGV 58 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP 116 + +R K + + ++ +E + +P ++++ L T T + Sbjct: 59 LVWGLIFWSVAFHR--KKSEELPRQFQYNLPLEIIYSAIPFVMVVVLFYFTAVT----QN 112 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGI------------ATVNEIAFPANTPVYFK 164 + + VVS W W F YP + + P ++ V + Sbjct: 113 YVLAKPANPDVKVNVVSFQWNWEFNYPGYKTPDGQPVRTVGSSEEIPLLVLPTDSSVEYH 172 Query: 165 VTSNSVMNSFFIPRLGSQIYAMA-----GMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 ++S V++SFF+P + + G++ G A G S M Sbjct: 173 LSSTDVIHSFFVPEFHFKRDTFPHPDKNNQDNVFQNTIDREGSFVGRCAELCGTYHSMMN 232 Query: 220 FKAIATPDRAAFDQWVA-KAKQSPNTMSDMAAFEKLA--APSEYNQVEYFSNVK 270 F+ A + FDQ++ + + +P T S A E L E + V Sbjct: 233 FEVRAL-SKDKFDQYMQLRTRINPQTGSPYTASEALGEMKCGELCAPRAVTGVP 285 >UniRef50_Q2TUA5 Cytochrome c oxidase subunit 2 n=37 Tax=Eukaryota RepID=Q2TUA5_DICDH Length = 294 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 93/283 (32%), Gaps = 58/283 (20%) Query: 7 NKSLGWLSLFAGTVLLSGCNSA------LLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 + L L + LS +++ DP + LM+++ Sbjct: 13 IRFLFLLGSCLIPLKLSFMDASHPWQLGFQDPATPVMEGIIYFNNQLMFLMILIACFVGW 72 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 M + + + ++ N++HS +E V P LI++F+ + ++ ++++ Sbjct: 73 MLYRSLVLFSSDSSNSFVPENFTHSTLLEIVWTISPALILMFIGLPSFALLYSMD----- 127 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQ----------------------------------- 145 + IT++VV W W + Y + Sbjct: 128 EIVDPSITLKVVGHQWYWSYEYSDYVSEVADSGGEAITEIKSINFDSYLIPEEDLIIPKP 187 Query: 146 -----------GIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 + N + P NT V VT V++S+ +P LG ++ + G ++ Sbjct: 188 YSTGKGGKVFRLLEVDNRVVLPVNTHVRVLVTGADVLHSWAVPSLGVKVDSCPGRLNLIN 247 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 + G + G + G M + + W+ K Sbjct: 248 IFIKREGVFYGQCSEICGVNHGFMPIVVQSV-GLDEYISWIGK 289 >UniRef50_P00408 Cytochrome c oxidase subunit 2 n=3968 Tax=root RepID=COX2_DROME Length = 228 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 89/238 (37%), Gaps = 34/238 (14%) Query: 21 LLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 + + N L D + + A +++++ + + + + + Sbjct: 1 MSTWANLGLQDSASPLMEQLIFFHDHALLILVMITVLVGYLMFMLFF-------NNYVNR 53 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 H +E + +P +I++F+A+ + + + L+ +E +T++ + W W + Sbjct: 54 FLLHGQLIEMIWTILPAIILLFIALPSLRLLYLLD-----EINEPSVTLKSIGHQWYWSY 108 Query: 141 IYPEQG---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 Y + + N + P N+ + VT+ V++S+ +P L Sbjct: 109 EYSDFNNIEFDSYMIPTNELMTDGFRLLDVDNRVVLPMNSQIRILVTAADVIHSWTVPAL 168 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 G ++ G + + N PG + G + G S M + P F +W++ Sbjct: 169 GVKVDGTPGRLNQTNFFINRPGLFYGQCSEICGANHSFMPIVIESVP-VNYFIKWISS 225 >UniRef50_A5G0I4 Cytochrome c oxidase subunit 2 n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0I4_ACICJ Length = 316 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 89/244 (36%), Gaps = 29/244 (11%) Query: 27 SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSN 86 I L+ +M VV L+ ++RAS + +H+ Sbjct: 45 WWFQPAASPIQKSIDWLMQFVLWIMAGVVGLVGLLLAIVIIRFRASKH--PVATTTTHNT 102 Query: 87 KVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG 146 +E + VP L+++ + V + + + +T++V W W + YP Sbjct: 103 LIEVIWTVVPALLLVVIFVPSLNLIYEQSNYT-----HRYMTVKVTGHQWYWEYDYPAAK 157 Query: 147 ---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYA 185 ++ + + PAN + FK+TS V++SFFIP LG Q YA Sbjct: 158 GVDFTSYPIPDNQIKPGQIARLSADHPLVLPANEKIVFKITSADVLHSFFIPSLGVQRYA 217 Query: 186 MAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 + G + PG Y G G M + +A P F W+A+AK Sbjct: 218 IPGQYWHQWTKIDAPGIYYGECNQICGMNHDNMPIEIVALP-LKQFKAWLAEAKADAAQG 276 Query: 246 SDMA 249 + Sbjct: 277 NVPP 280 >UniRef50_P74044 Cytochrome c oxidase subunit 2 n=1 Tax=Synechocystis sp. PCC 6803 RepID=P74044_SYNY3 Length = 300 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 98/301 (32%), Gaps = 33/301 (10%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCN--SALLDPKGQIGLEQRSLILTAFGLMLIVVIPA 58 M + ++ G L G L Q L L +V + Sbjct: 1 MSRKNLILLAVYIVFTVGASLWLGQRAYQWLPPAAAQEAQPVGDLFSFLVSLGSVVFLGV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 +R S ++ + +P + ++E VPI+++ ++A ++ + Sbjct: 61 AGAMAYSVIFHRFSLQNPQGAP-IRGNARLEIFWTVVPIILVTWIAWYSYVIYQRMNVLG 119 Query: 119 PLA--------------------------HDEKPITIEVVSMDWKWFFIYPEQGIATVNE 152 PL + P I V W W F YP G+ T +E Sbjct: 120 PLPVVEVPQLLGEKAIAADAPAELAMAQGSNINPERIGVEVKQWLWTFTYPNGGV-TSHE 178 Query: 153 IAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSG 212 + P + V +TS V++ F++P + + + N G Y + +SG Sbjct: 179 LHLPLDRRVTLNMTSKDVLHGFYVPNFRIKQDIVPNREIEFSFTPNRLGEYKLHDSQFSG 238 Query: 213 PGFSGMKFKAIATPDRAAFDQWVAKAKQ-SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 F+ M + + W+ K +P + + A E P+ + + V P Sbjct: 239 TYFAVMTAPV-VVQSLSDYQAWLESQKSLTPGELPNPALDEFKQTPTTPLK-SGWPTVPP 296 Query: 272 D 272 Sbjct: 297 G 297 >UniRef50_D2RSI3 Cytochrome c oxidase, subunit II n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RSI3_9EURY Length = 256 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 24/235 (10%) Query: 32 PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAV 91 + L L + + +++ + A K+ P + + + Sbjct: 27 AQSPNRELIDGLEYQLLYAALPLTLFVLMILIYAAVKFH-----DNDDPQPTTEDPSLEI 81 Query: 92 VWTVPILIII---FLAVLTWKTTHALEPSKPLAHDE---------------KPITIEVVS 133 WT II+ L+ + + PS+ L D + V Sbjct: 82 TWTAATAIILLFVGLSGYSVLVNPYISPSQALDTDNQSQEGFDSFEDLPDTGDEEVHVRG 141 Query: 134 MDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRL 193 W+W YPE + T N+I PAN V F +TS+ V++S F+P LG + A G TR Sbjct: 142 YQWEWQATYPEANVTTENQIVIPANEDVTFWLTSDDVIHSLFVPDLGVKQDAFPGDYTRA 201 Query: 194 HLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM 248 I +EPG YD + A + G G S M+ + + +DQW+++ + + D Sbjct: 202 RTIVDEPGRYDVVCAEFCGAGHSRMQGEIVVVDS-ETYDQWLSENEGTVAEAPDP 255 >UniRef50_UPI0001C31709 cytochrome c oxidase, subunit II n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31709 Length = 334 Score = 174 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 84/263 (31%), Gaps = 36/263 (13%) Query: 16 FAGTVLLSGCNSALLDPKG---QIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 V SG + L P+ E SL + ++V + W++RA Sbjct: 59 IGSLVFASGAFADFLTPESGGSPNADEIDSLYKIVLYIAIVVFVVVEGALFWSIWRFRAK 118 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPILI------------IIFL---------AVLTWKTT 111 H N + WTV + + + + Sbjct: 119 KGA---VAAQIHGNTRLEISWTVGAALILVALAAVTFSKLGSIQDPPNSGENGLQLADGV 175 Query: 112 HALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA-------TVNEIAFPANTPVYFK 164 +P + K +TI V + W + Y + E+ PA+T V Sbjct: 176 LTASTDEPSPPNGKKLTICVTGRQYIWRYTYGANCQRNAFGLPYSYEEMVAPADTTVVLD 235 Query: 165 VTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT-YDGISASYSGPGFSGMKFKAI 223 + + V++S++IP+LG + A+ G + A G Y G A G + M + Sbjct: 236 IEATDVIHSWWIPKLGGKFDAVPGYRNYTWFKAPRAGELYKGQCAELCGRNHADMTARVR 295 Query: 224 ATPDRAAFDQWVAKAKQSPNTMS 246 A + W+ + ++ Sbjct: 296 IV-TPAEYTAWLDRQRRDIAAAD 317 >UniRef50_Q1J1C4 Cytochrome c oxidase subunit 2 n=2 Tax=Deinococcus RepID=Q1J1C4_DEIGD Length = 435 Score = 174 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 109/304 (35%), Gaps = 34/304 (11%) Query: 9 SLGWLSLFAGTVLLSGCNSALL----DPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVG 64 L LL+GC S L D E + + A L +I+ + Sbjct: 42 WARAGLLGMAAALLTGCQSQQLLTLGDMSSAYNREILWMSIPAIALSIIIFVGVSWALFY 101 Query: 65 FAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 K+R N DA + +N++E ++ VP++I++ L+VL ++ L P + Sbjct: 102 TVRKFREENNDAP-PAQFHGNNRLETILVVVPVIIVMLLSVLAVRSLARLNPV-----PQ 155 Query: 125 KPITIEVVSMDWKWFFIYPE------QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 I+V+ + W F YP + NE+ P +TS V+++F+ P Sbjct: 156 DAEKIDVLGKQFWWNFSYPGAPAAAGGNVTNGNELVLPTGKWASLTITSGDVIHAFWAPN 215 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 LG Q A G Q + + G Y G G + M+FK IA P ++ ++ A Sbjct: 216 LGGQRDATPGTQKTWQIQTDRAGVYQGNCNVLCGASHANMRFKVIALP-PDRYNSFLTAA 274 Query: 239 KQSPNTMSDMAAFEK-----------------LAAPSEYNQVEYFSNVKPDLFADVINKF 281 + + E+ AA PDL + Sbjct: 275 QAYRAPTPAPGSAEERGYTLFTQGKPSTGALACAACHRVQGTPANGQAGPDLSFFGTRRT 334 Query: 282 MAHG 285 + G Sbjct: 335 LGAG 338 >UniRef50_Q7UI92 Cytochrome c oxidase subunit 2 n=1 Tax=Rhodopirellula baltica RepID=Q7UI92_RHOBA Length = 393 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 87/330 (26%), Gaps = 60/330 (18%) Query: 14 SLFAGTVLLSGCNSALLDP--KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRA 71 LL+ N+ P E + + L +P + V +KY Sbjct: 8 LAMTFPTLLADTNADFWFPIQGSSFAEEVDWVYDLILYISLAFFVPMMAFMVWCLFKYIK 67 Query: 72 SNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEV 131 + SH +E P ++++++ V + L+ P I V Sbjct: 68 ARGTKA-ESQISHHTTLELTWSIGPSVLLVWMFVQG--SISFLDMRTPPEGSYD---IGV 121 Query: 132 VSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQT 191 + W W Y E+ + P + S V++S F+P ++ + G Sbjct: 122 QAFKWGWTMDY--GNGTFHPELHIVKDEPTKLSMRSTDVIHSLFVPAFRAKKDIVPGRYN 179 Query: 192 RLHLIAN-----------------EPGT----------------------------YDGI 206 + GT +D Sbjct: 180 YMWFKPTVASEQISDEALAKIKKQSEGTTWDYDKVHTIQTEDGERELQVTPEGYTFFDLY 239 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVA-KAKQSPNTMSDMAAF----EKLAAPSEYN 261 Y G S M+ + +A + W+ + + P M + + + Sbjct: 240 CTEYCGKNHSEMQTVVVVHETQAELEAWIKANSSRGPIPMEEWGELLYGRRGCSGCHSVD 299 Query: 262 QVEYFSNVKPDLFADVINKFMAHGKSMDMT 291 + DL+ + +D Sbjct: 300 GTKLVGPSFKDLYGSQHALTTGENQVVDEN 329 >UniRef50_Q9GCK6 Cytochrome c oxidase subunit 2 n=187 Tax=Hexapoda RepID=Q9GCK6_9NEOP Length = 227 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 80/239 (33%), Gaps = 36/239 (15%) Query: 21 LLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAV-GFAWKYRASNKDAKYS 79 + + N + + + +++++ I + + F KY + Sbjct: 1 MATWSNINFQNSASPLMEQIIFFHDHTLIILMMITILVSYLMLNLFLTKY--------IN 52 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWF 139 +E + +P + +IF+A + IT++ + W W Sbjct: 53 RFLLEGQMIELIWTIIPAVTLIFIA-----LPSLRLLYLLDELNNPLITLKSIGHQWYWS 107 Query: 140 FIYPEQG---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178 + Y + + N I+ P N + VT+ V++S+ IP Sbjct: 108 YEYSDFNNIEFDSYMIKYNKEIPENFRLLEVDNRISLPMNNQIRIMVTATDVIHSWTIPS 167 Query: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 LG +I A G ++ L N PG + G + G S M + + F W+ Sbjct: 168 LGVKIDANPGRLNQMSLFINRPGIFFGQCSEICGANHSFMPI-VVESISIKNFINWINN 225 >UniRef50_C6QIT1 Cytochrome c oxidase subunit 2 n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QIT1_9RHIZ Length = 325 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 100/303 (33%), Gaps = 54/303 (17%) Query: 14 SLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASN 73 + FAG + L I + SL +++++ + +++ + +++ S Sbjct: 26 AAFAGLGQPTSGELGLQASASPIMDQISSLFHVVNTIIIVITLFVLVLMLWVMFRF--SE 83 Query: 74 KDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI------ 127 K +H+ +E VPIL+++ +A+ ++ K + Sbjct: 84 KRNPVPSRTTHNTMLEVAWTIVPILVLVGIAIPSFHLLFNQYSFPKPDVTIKAVGNAWFW 143 Query: 128 -------TIEVVSM--------------------------------DWK-----WFFIYP 143 + + S +K W + Sbjct: 144 EHEYVDDKVTITSNMVNDEDVLRAKLGDEAYDQKYGALEGTALTEAQYKDSAPIWAEDHK 203 Query: 144 EQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTY 203 + +A EIA P N V VTS V++S+ IP G ++ A+ G + + A + GT+ Sbjct: 204 LRRLAVDQEIAVPVNKVVTMLVTSADVIHSWTIPSFGVKMQAVPGRTSAVWFKATKLGTF 263 Query: 204 DGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQV 263 G + G S M D+ +D W+A K + AA V Sbjct: 264 TGQCSVLCGKLHSAMPIVVRVV-DQPVYDSWMAALKA-KDRKKAQQILNDDAAAHANQSV 321 Query: 264 EYF 266 Sbjct: 322 AAA 324 >UniRef50_Q2LCQ6 Cytochrome c oxidase subunit 1+2 n=857 Tax=root RepID=COX1_DICCI Length = 773 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 80/237 (33%), Gaps = 41/237 (17%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS------------NKD 75 DP I L F +++V + + W++ Sbjct: 536 GFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFAYKWSYPTIGDIEIFKNF 595 Query: 76 AKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMD 135 Y+ H +E V +P +I+ +A+ ++ +A++ +TI+++ Sbjct: 596 TAYN-QIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMD-----EIINPTVTIKIIGHQ 649 Query: 136 WKWFFIYPEQG-----------------------IATVNEIAFPANTPVYFKVTSNSVMN 172 W W + Y + + N + P T + +TS V++ Sbjct: 650 WYWSYEYGDNSSNLVEFDSYMVYERDLNEGQLRLLEVDNSMIVPVKTHIRLIITSGDVLH 709 Query: 173 SFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRA 229 S+ +P G ++ A+ G ++ L GT+ G + G M K A + Sbjct: 710 SWAVPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVEAVKVQE 766 >UniRef50_C5CVJ0 Cytochrome c oxidase, subunit II n=1 Tax=Variovorax paradoxus S110 RepID=C5CVJ0_VARPS Length = 314 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 95/289 (32%), Gaps = 24/289 (8%) Query: 24 GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWS 83 G + L G + + ++ +L+ R + W Sbjct: 7 GAPQSALRAAGPVAQSLLEVSGVLAVGGAVIFAGVMLLLALAV---RHRGGGRVNTRWWL 63 Query: 84 HSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYP 143 + P +++ L + P + + V W W Y Sbjct: 64 LGGGL-----AFPTVVLSALFAHS----EFHRPPWRPIPPPGALIVGVTGHMWWWEVRYR 114 Query: 144 E----QGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 + + T NEI P PVYF + S V++SF++P LG ++ + G L L A Sbjct: 115 DPASGAEVVTANEIRIPVGRPVYFGLGSADVIHSFWVPSLGGKMDMLPGRVQHLLLQAGR 174 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWV-------AKAKQSPNTMSDMAAFE 252 PGT+ G A Y G + M +A + AAFD W+ A A + + Sbjct: 175 PGTWRGQCAEYCGEQHARMALHVVAE-EPAAFDAWLAGQARPAAAASRELERGREAFLAH 233 Query: 253 KLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHE 301 + A V S + PDL + G + + AH Sbjct: 234 RCNACHTVRGVSEQSRLGPDLTHVGSRLHLGAGTAPNDAAQLAAWVAHT 282 >UniRef50_C7P0B0 Cytochrome c oxidase subunit 2 n=3 Tax=Halobacteriaceae RepID=C7P0B0_HALMD Length = 249 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 92/252 (36%), Gaps = 22/252 (8%) Query: 7 NKSLGWLSLFAGTVLLSGCNSAL-LDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGF 65 +G ++LF + A+ + L + + + + + + + Sbjct: 3 RHRVGLVALFGAIAFAALTQPAVAQTSASETSELIWGLNMNLLYVAIPITVLVEGILIYT 62 Query: 66 AWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT----HALEPSKPLA 121 W++ + ++E +I++F+ V +++ + ++ L Sbjct: 63 VWRF----SKNDEPLPTMENRRLEITWTVATAIILLFVGVASYQVMAEPMVTAQSTQQLD 118 Query: 122 HDEKPITIEVVSMDWKWFFIYPEQGIATVNE------------IAFPANTPVYFKVTSNS 169 E+P+ +EVV+ + W F Y T E + PAN V VTS Sbjct: 119 TSEEPLEVEVVAQKYAWTFNYNGTAANTSQEYSADNRLSNGGTLVLPANRTVRLSVTSTD 178 Query: 170 VMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRA 229 +++F +P L + AM G + E GTY A Y G G S M + P + Sbjct: 179 WLHAFHVPGLALKQDAMPGQHNTIQTRVTETGTYQLYCAEYCGSGHSQMLGEVRVLP-QD 237 Query: 230 AFDQWVAKAKQS 241 + WV + S Sbjct: 238 EYQNWVEDQQSS 249 >UniRef50_C8XCY3 Cytochrome c oxidase subunit 2 n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XCY3_NAKMY Length = 316 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 91/283 (32%), Gaps = 30/283 (10%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKG------QIGLEQRSLILTAFGLMLIVV 55 R R + L +VL+SGC+ A L G R A L + Sbjct: 3 RSRARRRIFLAGMLGVLSVLVSGCSFADLPTWGWPMGVTPQATRMREFWQGATIAALAIG 62 Query: 56 IPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE 115 + + Y Y + +E V VP L++ L T T E Sbjct: 63 VVVWGLMFWAFIVYHKRKNGPLYPKQTKENLPLELVYTAVPFLMVFVLFYFTVTT----E 118 Query: 116 PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA-------------TVNEIAFPANTPVY 162 +T++VV+ W W F YP + + + P N + Sbjct: 119 NVALEKQPNPDVTVDVVAFKWNWDFGYPGTSLPGGGGEVHTVGTSNEIPILVLPVNKVIQ 178 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMA-----GMQTRLHLIANEPGTYDGISASYSGPGFSG 217 + + S V++SF+ + + + G + G A G Sbjct: 179 YDLRSKDVIHSFWTIDFLFKRDVFPYPEQNQTDNKFQNTIEQTGAFVGRCAELCGTYHGS 238 Query: 218 MKFKAIATPDRAAFDQWVA-KAKQSPNTMSDMAAFEKLAAPSE 259 M F+ A P + +D ++ + +P T + A E L A E Sbjct: 239 MNFEVRAVP-QDVYDTYLDYRQTVNPQTRAPYTAAEALTATGE 280 >UniRef50_Q1YMW9 Putative cytochrome oxidase subunit II n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMW9_MOBAS Length = 364 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 78/274 (28%), Gaps = 27/274 (9%) Query: 62 AVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTT-HALEPSKPL 120 V R + S + W L++ L ++ + L Sbjct: 82 MVITGILRRRDPDLQAGGRIIAVSRPPGGIGWIHAGLVLTTLVLIGFTAWTVDLMARIAA 141 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQG-----IATVNEIAFPANTPVYFKVTSNSVMNSFF 175 E IEV + + W Y + T NE+ P PV ++ S V++SF+ Sbjct: 142 PGREPSFMIEVTAQQFWWEARYVDPDDPARSFETANELHIPLGEPVRIRLRSTDVIHSFW 201 Query: 176 IPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF---- 231 +P L + A+ G + + G Y G Y G + M + F Sbjct: 202 VPALSGKTDAIPGQINETWIQGDRVGVYRGQCTEYCGQQHTNMAMRMF-VDAPDDFTAWW 260 Query: 232 ---DQWVAKAKQSPNTMSDMAAFE-KLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKS 287 A ++ AF + A V PDL + +A Sbjct: 261 DAQAADAEPASPGSLAVAGRQAFRLRCGACHTVRGTRSAGEVGPDLTHLMSRTTIASAML 320 Query: 288 M------------DMTQPEGEHSAHEGMEGMDMS 309 G H G+ G ++ Sbjct: 321 PNTKGHLSGWIAAPQALKPGSHMPDTGISGPELH 354 >UniRef50_D0LN58 Cytochrome c oxidase, subunit II n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LN58_HALO1 Length = 389 Score = 169 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 85/281 (30%), Gaps = 38/281 (13%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS---------------- 72 L + + E +L L+ + F +YR S Sbjct: 14 LPEQASSVAGEIDALHYVVILTSLLGSAAVSAAVLYFLVRYRRSAQVAAADSDADSDADS 73 Query: 73 ---NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 + D + +P+ + + V L+ +F+ W + E + + Sbjct: 74 AAQHADVRPAPSRRRGMPLALEIAVVLGLLGMFVG---WWVIGFRQFVNLRTAPEDAMRV 130 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 V W W F Y G A+ + PA PV ++S V++SF++P + A+ G Sbjct: 131 YVTGKKWMWSFAY-PDGQASNAVLYVPAGQPVELLLSSRDVIHSFYVPAFRLKHDAVPGR 189 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS-------- 241 + A +PG Y + A Y G G + M+ + A + A Sbjct: 190 MNSMWFEAEKPGVYPILCAEYCGDGHATMRGQV-VVLAPADYQAQRGLAPGEQAGPAGAL 248 Query: 242 ------PNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD 276 +A + + ++ Sbjct: 249 AAGDSMAAQGERLATRHGCMRCHTADGTPHIGPSFARVYER 289 >UniRef50_A5GVD1 Cytochrome c oxidase subunit 2 n=11 Tax=Cyanobacteria RepID=A5GVD1_SYNR3 Length = 312 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 96/284 (33%), Gaps = 25/284 (8%) Query: 9 SLGWLSLFAGT------VLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 ++ ++L G ++ +L G+ V + + Sbjct: 15 AIVIITLAVGANLTMSWLMAQWSYGWFPPQASTAAPYVDNLFALETGIGTFVFLGCTGVM 74 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP--- 119 RA D Y + ++E +P +++ +A + + L+ P Sbjct: 75 AWSLLFDRADKYDESYGAPIEGNTRLEITWTLIPTVVVFAIAFYSMQVNDKLDALGPKHK 134 Query: 120 ------------LAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTS 167 I+V+S W W F+YP ++ E+ P N V F++ S Sbjct: 135 YAIGTDPLVGAVEDPRATVGPIDVISRQWSWEFVYPNGVRSS--ELHLPINQRVNFRLIS 192 Query: 168 NSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPD 227 V +SF++P + + G + + G + A +SG +S + + Sbjct: 193 EDVNHSFYVPAFRLKQDIVPGSVISFSVTPTKEGRFRLRDAHFSGAYYSQNQTDVL-VQS 251 Query: 228 RAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 +A +D W+ + P ++ +L A ++ V P Sbjct: 252 QAIYDDWLKTTAKQPLQ-PGLSPGNELYAKRLATGDRGWATVPP 294 >UniRef50_B5INR0 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INR0_9CHRO Length = 292 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 106/296 (35%), Gaps = 54/296 (18%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAI 59 M++R + + GT LL G LL SL F + ++ + + Sbjct: 1 MQIRAALTTALATTGLVGTGLLVGTRVNLLPVEASSNASTYDSLFKVLFSIGTMLFLGIL 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKP 119 ++ V ++R D+ P + +E V +P ++I+F+ + ++ + P Sbjct: 61 IVVVYSLVRFRRPVGDSGDGPAIEGNLPLEIVWTAIPAVVILFVGIYSYDIYERMGGMAP 120 Query: 120 LA-------------------------------------------------HDEKPITIE 130 L + ++ Sbjct: 121 LMDHTTMHEAAMHEAAMHHSAMPASAAPDSQAGERIWGGIGPAAAADRNGGAAAASLPVD 180 Query: 131 VVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQ 190 V +M + + F YPE I T E+ P PV ++ + V+++F++P+ + + G Sbjct: 181 VTAMQFAFIFHYPEGDI-TSGELHVPLGQPVELRMQARDVIHAFWVPQFRLKQDVIPGQT 239 Query: 191 TRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 TRL A GTY + A G GM+ + AF+ W + + +P T + Sbjct: 240 TRLSFTATRAGTYPIVCAELCGAYHGGMRSNV-VVHEPEAFEAW--RLQNAPATTT 292 >UniRef50_Q6E775 Cytochrome c oxidase subunit 2 n=9 Tax=Eukaryota RepID=Q6E775_SAPFE Length = 252 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 82/233 (35%), Gaps = 31/233 (13%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 DP + + ++++VI + + + + K + + H Sbjct: 23 GFQDPATPVMEGIINFHHDLVFFLVLIVIFVSWILARCIFFF--NENTNKKAETFVHGTV 80 Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG- 146 +E V P LI+I +A+ ++ +A++ + +T++V+ W W + Y + Sbjct: 81 LEIVWTITPALILIIIAIPSFSLLYAMDEVI-----DPILTLKVIGSQWYWSYEYSDAMD 135 Query: 147 ----------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 + N + P NT + +T+ V++S+ +P LG ++ Sbjct: 136 DSIFFDSYMVLEEDLDKGQFRLLEVDNRVVVPTNTHIRVIITATDVLHSWAVPSLGVKLD 195 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 A G + + G + G + G M A + W K Sbjct: 196 ACPGRLNQTSIFIKREGVFYGQCSEICGINHGFMPIVVEAV-SLDDYINWFNK 247 >UniRef50_Q5V3P5 Cytochrome c oxidase subunit 2 n=1 Tax=Haloarcula marismortui RepID=Q5V3P5_HALMA Length = 240 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 89/252 (35%), Gaps = 21/252 (8%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 MRLR+ G + + + ++ L + L + + L Sbjct: 1 MRLRRRVLQAGLVVVGLSLLAAPVTAQSVNRAA------IDDLNEQLLYVALPLTLFVEL 54 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPI-LIIIFLAVLTWKTTHALEPSKP 119 V +++R P + + V WT I++F+ V + + Sbjct: 55 TLVYVIYRFR-----NNDDPKPTVDDPALEVTWTAATGAILVFVGVSAFVVMANPYITPA 109 Query: 120 LAHD--------EKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVM 171 A + I+V++ W W F Y E + T + PA+ V F++ + V+ Sbjct: 110 AAEASAGGGDAFAEDTQIDVLAYQWGWEFSYGEASVTTEERLVLPADKNVTFRLRTTDVI 169 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAF 231 ++ +IP+LG + G A EPG Y A G G S M +++ + Sbjct: 170 HAIYIPQLGVKQDIFPGRTMTARTHATEPGEYRLYCAEMCGAGHSKMDATV-VVKNQSGY 228 Query: 232 DQWVAKAKQSPN 243 D W+ + Sbjct: 229 DAWMENQTTAAG 240 >UniRef50_A9BE64 Cytochrome c oxidase subunit 2 n=25 Tax=cellular organisms RepID=A9BE64_PROM4 Length = 291 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 90/264 (34%), Gaps = 31/264 (11%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDP-KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 ++ + G N LL L F + ++ + + V Sbjct: 27 TILISLGLIIGGIWVGSNVNLLPVVASSNAPIYDELFKVLFIIGTLLFFGMLGLVVYSLI 86 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP- 126 ++R + +E VP ++I+F+ + ++ + + L + + Sbjct: 87 QFRRKPGQTGDGLAIEDNLPLEIFWTAVPAIVILFVGLYSYDIYERMGGMESLGANNQHH 146 Query: 127 ---------------------------ITIEVVSMDWKWFFIYPEQGIATVNEIAFPANT 159 I +EV +M + + F YP+ I + E+ P Sbjct: 147 HQMASKQRIWGGIGSKDKSMQGANGTLIPVEVTAMQFAFLFHYPDGDIIS-GELHVPIGQ 205 Query: 160 PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 PV K+ S V+++F++P + + G T L+ G Y I A GP GM+ Sbjct: 206 PVTMKMESKDVIHAFWVPEFRLKQDVIPGQPTILNFTPTRVGKYPIICAELCGPYHGGMR 265 Query: 220 FKAIATPDRAAFDQWVAKAKQSPN 243 + + W AK + P+ Sbjct: 266 STV-VVEELEDYQNWFAKNAKKPD 288 >UniRef50_P98054 Cytochrome c oxidase subunit 2 n=4 Tax=Cyanobacteria RepID=COX2_THEVL Length = 327 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 88/286 (30%), Gaps = 52/286 (18%) Query: 9 SLGWLSLFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 +L + G + LL + + + + + + F Sbjct: 10 TLTAGVVVTLISFWVGHHHGLLPEQASEQAPLVDNFFDIMLTIGTALFLVVQGAIILFVI 69 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHD---- 123 +YR + + +EA +P LI+IFL + + + P H Sbjct: 70 RYRRRAGEEGDGLPVEGNLPLEAFWTAIPALIVIFLGIYSVDIFQRMGGLNPGDHAMHSM 129 Query: 124 --------------------------------------------EKPITIEVVSMDWKWF 139 + ++V M + W Sbjct: 130 HAPKSGMAVVAQAPSKTTSDATALLAAAQPPEIGIGASPDVQGKAPDLVVDVAGMQYAWI 189 Query: 140 FIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANE 199 F YP+ GI + E+ P V +++ V++SF++P+ + A+ G+ T A + Sbjct: 190 FTYPDSGIVS-GELHIPVGKDVQLNLSARDVIHSFWVPQFRLKQDAIPGVPTT-RFKATK 247 Query: 200 PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTM 245 GTY + A G M+ + I F+ W + + Sbjct: 248 VGTYPVVCAELCGGYHGAMRTQVIVH-TPEDFETWRRQNQAIATAP 292 >UniRef50_A8LYC6 Cytochrome c oxidase subunit 2 n=6 Tax=Actinomycetales RepID=A8LYC6_SALAI Length = 323 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 87/272 (31%), Gaps = 37/272 (13%) Query: 23 SGCN--------SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNK 74 +GC+ L + + L V + + +YR Sbjct: 47 TGCDVGATFAGFGWPQGGITPEANRMYDLWIASCIAALAVGVFVWGLIFWCVVRYRKRGN 106 Query: 75 DAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSM 134 + ++ +E + PILI+ L T + +T+EVV+ Sbjct: 107 --ELPVQTRYNLPMEFLYTIAPILIVSVLFYYTAIV----QTDVGKTSRNPDVTVEVVAF 160 Query: 135 DWKWFFIYPEQGIATVNE-------------IAFPANTPVYFKVTSNSVMNSFFIPRLGS 181 W W F Y + N + P+ + F+ TS V++SF++P + Sbjct: 161 KWNWQFNYRDGQGVEANTIASVLGTSEVIPILVLPSERSIRFEETSRDVIHSFWVPEMLF 220 Query: 182 QIYAMAGMQTRLHLIANE---PGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA-- 236 + G + +E G Y G A G + M F+ +D+++A Sbjct: 221 KRDVFPGSIRNV-FEVSELEGEGAYVGRCAELCGTYHAFMNFELRVV-SPERYDRFIALK 278 Query: 237 ---KAKQSPNTMSDMAAFEKLAAPSEYNQVEY 265 ++ Q T + P E + E Sbjct: 279 QDGQSTQEALTAIGENPYATTTEPFETRRTEA 310 >UniRef50_C6XZ37 Cytochrome c oxidase subunit 2 n=2 Tax=Pedobacter RepID=C6XZ37_PEDHD Length = 408 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 99/284 (34%), Gaps = 49/284 (17%) Query: 2 RLRKYNKSLGWLSLFAGTVLLSG-----CNSALLDPKGQIGLEQRSLILTAFGLMLIVVI 56 N L L L G + N L D + G + + L IV I Sbjct: 88 NWNAVNGVLFALFLIVGLYGVYWEYTVHGNMILPDAASEHGEKIDQMFNITLILTTIVFI 147 Query: 57 PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEP 116 ++ GFA+ Y+ S K Y + H+N +E V +P L++ L ++ + T ++ Sbjct: 148 ATHILLFGFAYIYKHSGKRKAY--YYPHNNTLERVWTIIPALVLTVLVLMGFLTWRSI-F 204 Query: 117 SKPLAHDEKPITIEVVSMDWKWFFIYPEQGI----------------------------A 148 K + KPI+IE+ S + W YP Sbjct: 205 YKIEDPNNKPISIEITSSQFAWAIRYPGADGIVGLKNYKLINSINALGIDFKDKNNLDDQ 264 Query: 149 TVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGT------ 202 + +E+ P N PV +TS V++SF++P Q+ + GM + Sbjct: 265 SADEMVIPVNKPVRLILTSKDVIHSFYMPHFRVQLNTVPGMTSYFEFTPTITTEEMKAKT 324 Query: 203 ------YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 Y + G G M+ + A ++ WV K Sbjct: 325 NDPTFKYLFLCNKICGDGHYKMQKEVKVV-SMAEYEAWVKKQPA 367 >UniRef50_B5U6Z7 Cytochrome c oxidase subunit 2 (Fragment) n=1144 Tax=root RepID=B5U6Z7_9COLE Length = 256 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 89/272 (32%), Gaps = 46/272 (16%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60 M+ R + + WLS + +L D + + A +++++ + Sbjct: 5 MKKRLFLEMATWLS-----------SYSLQDAASPLMEQLMLFHDHAMMILVMITVLVGY 53 Query: 61 MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120 + + +E + +P +IF+A + + L+ Sbjct: 54 LMGMLF-------NNKYTYRFLLEGQMIELIWTILPAFTLIFIAFPSLHLLYLLD----- 101 Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQG---------------------IATVNEIAFPANT 159 + I+++ + W W + Y + + N + P N+ Sbjct: 102 EINNPLISVKTIGHQWYWSYEYTDFKNTEFDSYMVQINDLSPQNFRLLDVDNRMVLPFNS 161 Query: 160 PVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMK 219 + VT+ V++S+ IP L +I A G + N G G + G S M Sbjct: 162 QIRLMVTAADVLHSWTIPSLSVKIDATPGRLNQTSFFLNRTGLLFGQCSEICGANHSFMP 221 Query: 220 FKAIATPDRAAFDQWVAKAKQSPNTMSDMAAF 251 + + F +W+ K S + D + Sbjct: 222 ISIE-SISSSYFIKWINKM-NSIKPLGDWKQY 251 >UniRef50_Q07JU2 Cytochrome c oxidase, subunit II n=6 Tax=Alphaproteobacteria RepID=Q07JU2_RHOP5 Length = 560 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 92/233 (39%), Gaps = 15/233 (6%) Query: 15 LFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRAS 72 + A +LL+GC + LDP G + L + + + + + Sbjct: 338 VAATGMLLAGCGGPLSALDPAGPAAVAIAELWWVMLIGAAALFALVMALLLWA---FVRP 394 Query: 73 NKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVV 132 + SP + V L E P + I+V Sbjct: 395 STGTAGSPKLWLVGGGLLLPALVLAP-------LLAYALSTGERLLPHPVASDTLRIDVE 447 Query: 133 SMDWKWFFIYPEQG---IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 + W+W F YPE ++N + P P+ +V+S V++SF++PRLG +I A+ G Sbjct: 448 ARQWQWTFRYPEDREGVGLSINTLHIPVGRPIDLRVSSADVIHSFWVPRLGGKIDAIPGH 507 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 R+ L A++ G Y G+ A + G + M+F A P A D+ A + P Sbjct: 508 VNRIRLSASQAGIYRGVCAEFCGTEHTRMEFSVEAHPPEAYRDRLRALPQAPP 560 >UniRef50_B5WPG4 Cytochrome c oxidase, subunit II n=2 Tax=Burkholderia RepID=B5WPG4_9BURK Length = 228 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 15/237 (6%) Query: 10 LGWLSLFAGTVLLSGCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 + LSGC + LDP G L +I+ +++ + + Sbjct: 1 MRLTVQAGSLAALSGCAGPLSTLDPSGPAAASIAGLWWVMLAGAVILFAMVLVLFLMTVF 60 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 + + S + + +P +I+I L +A E PL Sbjct: 61 R-------PGWGSRVSPARWIVLGGLVLPAVILIPLICY---ALYAGELLLPLRAHAPA- 109 Query: 128 TIEVVSMDWKWFFIYPEQG-IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 IE ++ W+W F YPE G + T N + PA TPV VTS V+++F+IPR +I A+ Sbjct: 110 RIEAIAQQWRWTFRYPELGNVETGNVLHLPAGTPVDIVVTSMDVVHAFWIPRFAGKIDAV 169 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPN 243 G T L + A++PG Y G + G G + M F I F V A + Sbjct: 170 PGHHTLLRIEADQPGQYAGQCNQFCGIGHAQMHFTVI-VDRPEDFPAAVKSAAANGE 225 >UniRef50_B4B7G4 Cytochrome c oxidase subunit 2 n=3 Tax=Cyanobacteria RepID=B4B7G4_9CHRO Length = 322 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 97/291 (33%), Gaps = 26/291 (8%) Query: 5 KYNKSLGWLSLFAGTVLLSGC--NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMA 62 ++ + + G + L L +L L + + Sbjct: 24 RWLMLGVIAVILMAISIWIGQLSYAWLPPQASAESLLVDNLFSFLVTLGTFIFLGVTGTV 83 Query: 63 VGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHAL-------- 114 + + +A D P + +E + +PIL++ ++A +++ + Sbjct: 84 MYSVFFQQAGKYDYSDGPPVEGNVTLEIIWTAIPILLVFWIAGYSYQIYIDMGIQTNMGL 143 Query: 115 ------------EPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVY 162 + E IEV + W W F YP +++ E+ P + Sbjct: 144 GHLHLPIKMESAMAATTANTPEAVEKIEVEAKQWAWVFKYPNSKVSST-ELHLPEGKRIR 202 Query: 163 FKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKA 222 +TS+ V++ F+IP + + + G Y + +SG F+ M+ Sbjct: 203 LALTSDDVLHGFYIPAFRIKQDIIPAHPLDVEFTPIRTGKYRLRDSQFSGTYFATMQANV 262 Query: 223 IATPDRAAFDQWVAKAKQ-SPNTMSDMAAFEKLAAPSEYNQ-VEYFSNVKP 271 I + +W+ A +P ++ AA E ++ + +V P Sbjct: 263 IVE-SLEDYQKWLHSAATLTPTPATNQAATEYEQETNKNKPFQAGWPSVAP 312 >UniRef50_UPI0000164D05 cytochrome c oxidase, subunit II n=1 Tax=Deinococcus radiodurans R1 RepID=UPI0000164D05 Length = 334 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 17/238 (7%) Query: 3 LRKYNKSLGWLSLFA-GTVLLSGCNSA----LLDPKGQIGLEQRSLILTAFGLMLIVVIP 57 R++ + L A G +LS C L D E L A GL +I+ + Sbjct: 44 KREWATAWTRAGLIALGAAVLSSCGQGQNIFLGDQAAAYNREIWDLSKWAIGLSIIIFVG 103 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPS 117 M K+R A + +N++EA + +PI++++ L+VL+ ++ L P Sbjct: 104 VSGMLFYTVQKFREDRNTAA-PQQFHGNNRLEAWLIGIPIILVLGLSVLSVRSLARLNPV 162 Query: 118 KPLAHDEKPITIEVVSMDWKWFFIYPE---QGIATV---NEIAFPANTPVYFKVTSNSVM 171 ++ + IE + W F YP QG +TV NE+ PA V TS V+ Sbjct: 163 -----SQQTLGIEATGAQFWWNFTYPGSPVQGGSTVANGNEMVMPAEQKVAISTTSKDVI 217 Query: 172 NSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRA 229 + F+ P LG Q ++ ++ L PG Y G + G + M+FK IA A Sbjct: 218 HGFWAPNLGGQRASIPTVKRVWELDTQRPGVYQGNCSQLCGASHANMRFKVIALSPEA 275 >UniRef50_P00405 Cytochrome c oxidase subunit 2 n=1480 Tax=Eukaryota RepID=COX2_MOUSE Length = 227 Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 81/234 (34%), Gaps = 34/234 (14%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 L D I E + ++ ++ + + + + Sbjct: 6 QLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLML-------TTKLTHTSTMDA 58 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 +VE + +P +I+I +A+ + + + ++ + +T++ + W W + Y + Sbjct: 59 QEVETIWTILPAVILIMIALPSLRILYMMD-----EINNPVLTVKTMGHQWYWSYEYTDY 113 Query: 146 G---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIY 184 + N + P P+ ++S V++S+ +P LG + Sbjct: 114 EDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTD 173 Query: 185 AMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 A+ G + + +N PG + G + G S M + F+ W A Sbjct: 174 AIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPI-VLEMVPLKYFENWSASM 226 >UniRef50_P00403 Cytochrome c oxidase subunit 2 n=2315 Tax=Fungi/Metazoa group RepID=COX2_HUMAN Length = 227 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 82/233 (35%), Gaps = 34/233 (14%) Query: 21 LLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 + L D I E + A ++ ++ + + + Sbjct: 1 MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLV-------LYALFLTLTTKLTNT 53 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 N S + ++E V +P +I++ +A+ + + + + ++ +TI+ + W W + Sbjct: 54 NISDAQEMETVWTILPAIILVLIALPSLRILYMTDEV-----NDPSLTIKSIGHQWYWTY 108 Query: 141 IYPEQG---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 Y + G + N + P P+ +TS V++S+ +P L Sbjct: 109 EYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSWAVPTL 168 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFD 232 G + A+ G + A PG Y G + G S M + F+ Sbjct: 169 GLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPI-VLELIPLKIFE 220 >UniRef50_B0C0A3 Cytochrome c oxidase subunit 2 n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C0A3_ACAM1 Length = 328 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 98/280 (35%), Gaps = 44/280 (15%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQ--RSLILTAFGLMLIVVIPA 58 M++ +L L L N+ LL P L + + + + Sbjct: 1 MKVPTAILTLIIGILITLASLWVSQNNDLLLPIAAASEAAEIDRLFASMMAIATGLFLIV 60 Query: 59 ILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSK 118 + + +R + D + + +E V +P +++++L + ++ +++ Sbjct: 61 QGALLYSLFAFRRKSDDQTDAEPVHGNVPLEIVWTAIPAMLVLWLGIYSFDVYQSIDSVG 120 Query: 119 PLAHDE----------------------------------------KPITIEVVSMDWKW 138 + +P+ + V + + W Sbjct: 121 TMGSHNMAHQHGDMERVADADAATMVTDQGQMPSGALSQAVATETVEPLQVNVDGLQYAW 180 Query: 139 FFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIAN 198 F YP+ GI + E+ PAN PV +++ V+++F++P + A+ G T L+ Sbjct: 181 LFTYPDTGIIS-GELHLPANRPVTLNISARDVIHAFWVPEFRLKQDAVPGQVTHLNFQPT 239 Query: 199 EPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA 238 + G Y I A G MK ++I A + WV Sbjct: 240 KEGVYPVICAELCGAYHGAMKTRSIVH-SGAEYQAWVDSQ 278 >UniRef50_A3K373 Cytochrome o ubiquinol oxidase, subunit II n=1 Tax=Sagittula stellata E-37 RepID=A3K373_9RHOB Length = 332 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 10/288 (3%) Query: 13 LSLFAGTVLLS---GCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKY 69 + AG ++ S + L P G I +Q + L A + L+ V+PA+++ ++Y Sbjct: 3 VLFVAGLLIASPDRANAADLFSPIGPIMQDQSAHFLRAALIALVAVLPAMILLPIMLFRY 62 Query: 70 RASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITI 129 R A+Y+P+W + EA +W VP+L+I LA + T L+P +PL + P+ I Sbjct: 63 RIG-GSARYTPDWEFNKWFEAAIWGVPVLVICVLAFWLAQATLKLDPYQPL--GDDPLEI 119 Query: 130 EVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM 189 ++V D+++ IYP+Q +A ++EI P PV F++T+++VM SF QIYAM GM Sbjct: 120 DLVGTDFRYLAIYPDQQVAALDEIVIPTGRPVTFRLTTDTVMQSFLPNGFAGQIYAMPGM 179 Query: 190 QTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMA 249 T+L+L AN G ++G GF+ M+ A A FD WV A +P A Sbjct: 180 ITKLNLAANREGEGLATQTQFNGYGFANMRVPMRAV-SAAQFDAWVDGATGAPLDAESYA 238 Query: 250 AF---EKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPE 294 A E LF V+ ++ QP Sbjct: 239 RLVVKGDSAQEYHPATPELRPLADACLFDRVVARYHQGTAVPPEAQPG 286 >UniRef50_C7I249 Cytochrome c oxidase subunit 2 n=1 Tax=Thiomonas intermedia K12 RepID=C7I249_THIIN Length = 288 Score = 164 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 95/256 (37%), Gaps = 36/256 (14%) Query: 29 LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKV 88 +P I +++ L+ + L + I +K+R S + ++ S KV Sbjct: 40 FQNPVSPIAKQEKFLMDMMLWVCLGIGIVVFGAMFYSVYKHRKSKGA--VAAHFHESTKV 97 Query: 89 EAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG-- 146 E +PILI+I + + +T A E + +T++ WKW + Y Sbjct: 98 EIAWTIIPILIVIAILIPATRTVIAQENH-----SDSFMTVKATGAQWKWGYDYMAGPGK 152 Query: 147 --------------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 +A +E+ P + + TS+ V++ F++ LG Sbjct: 153 GISFWSTLTTPYSEIYEGKDLPSNFVLAVDHELVVPVDKKIKIVTTSDDVLHGFYVNSLG 212 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 Q+ A+ G A + GTY G A G + M I ++QWVA+ K+ Sbjct: 213 VQMDAIPGFVRSTWFTAEKTGTYYGQCAQICGKYHAFMPI-VIKVVTMPEYEQWVAQWKK 271 Query: 241 SPNTMSDMAAFEKLAA 256 + + A + Sbjct: 272 AHPDSTPPADGAAPSK 287 >UniRef50_A5PDP5 Putative cytochrome c oxidase chain II protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDP5_9SPHN Length = 352 Score = 164 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 111/305 (36%), Gaps = 26/305 (8%) Query: 21 LLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 L G +LDP G + +L + FGL V + + + A K Sbjct: 8 ALWGWPPPVLDPAGPYSGKVTTLAWSLFGLGAFVTLVVVFA-LWVAIK---------GPD 57 Query: 81 NWSHSNKVEAVVWTVPILI--IIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKW 138 W E +W + I+ A+L W T ++P+ DE + I + W + Sbjct: 58 KWKTKLGGERAIWLGGVAFPGIVLTALLVWGLTLTASLTEPIRGDE--MRIRITGEMWWF 115 Query: 139 FFIYPEQGIAT----VNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 Y + A NEI P PV ++ S V++SF++P L + + G +T L Sbjct: 116 RVQYLDASGAVLMEDANEIHIPVGRPVVLELESADVIHSFWVPHLSGKKDMIPGRRTLLR 175 Query: 195 LIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKA------KQSPNTMSDM 248 + A+ G Y G+ A Y G + M F A+A D F +W A+ T + Sbjct: 176 IEADRAGEYGGVCAEYCGRQHALMGFVAVAHDD-GDFREWYAERNDRLIPAGLGATTPEE 234 Query: 249 AAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDM 308 F SE + F V + + + G+ G D+ Sbjct: 235 PLFASRTVGSEQSADPRPVAGANADFGQVSGQELFMQSGCAACH-RVAGTEANGLAGPDL 293 Query: 309 SHAES 313 +H S Sbjct: 294 THVGS 298 >UniRef50_A7BSH7 Cytochrome c oxidase aa3, subunit II n=1 Tax=Beggiatoa sp. PS RepID=A7BSH7_9GAMM Length = 256 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 16/243 (6%) Query: 17 AGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDA 76 A + + DP + + ++ I ++ + F +KYR N+D Sbjct: 26 APVQAPAATTPGINDP-SPGW---DYVWYEVIIDISLIGILFSIVTLYFMFKYRRRNEDD 81 Query: 77 KYSPNWSHSNKVEAVVWTVPILIII----FLAVLTWKTTHALEPSKPLAHDEKPITIEVV 132 + +P S + +PI +I+ FLA W +A + I++ Sbjct: 82 EGNPPRMTST-LAIGWTVIPIFLIMADDFFLAAQGWDLWNAYRQVPAER-----MEIQLE 135 Query: 133 SMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTR 192 S + W + Y G+ T NE+ PA TP+ ++TS ++S FIP + +M G T Sbjct: 136 SGMYSWDYTY-PNGVETQNELIVPAGTPIMLRMTSRDTLHSHFIPDFRVKEDSMPGRITY 194 Query: 193 LHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFE 252 L EPG + A Y G S M K I A F+QW + + A + Sbjct: 195 LWFYPQEPGEHQVTCAEYCGIMHSYMVGKVI-VKSEADFNQWYNQEAANLVQSETEATKK 253 Query: 253 KLA 255 + A Sbjct: 254 EEA 256 >UniRef50_P24011 Cytochrome c oxidase subunit 2 n=13 Tax=Bacillales RepID=COX2_BACSU Length = 356 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 105/276 (38%), Gaps = 26/276 (9%) Query: 23 SGCNSALLD---PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYS 79 SGC L P G++ +Q L + + +M++VV ++ ++R S Sbjct: 19 SGCGKPFLSTLKPAGEVADKQYDLTVLSTLIMVVVVAVVSVIFFYVIVRFRRSRVGENTI 78 Query: 80 PNWSHSNKVEAVVWTVPILIIIFLAV-----LTWKTTHALEPSKPLAHDEKPITIEVVSM 134 P NK + WTV ++++ + V T + K E + + V + Sbjct: 79 PKQVEGNKFLEITWTVIPILLLIILVIPVVLYTLELADTSPMDKKGRKAEDALVVNVRAN 138 Query: 135 DWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLH 194 + W F YP+ GI T E+ P + VYF + ++ V +SF+IP +G ++ + + Sbjct: 139 LYWWEFEYPDYGIITSQELIVPTDQRVYFNLKASDVKHSFWIPSVGGKLDTNTDNENKFF 198 Query: 195 LIAN-----EPGT-YDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDM 248 L + E G + G A GP + M FK F W + K +T Sbjct: 199 LTFDSKRSKEAGDMFFGKCAELCGPSHALMDFKVKTM-SAKEFQGWTKEMKNYKSTAESD 257 Query: 249 AAFEK--------LAAPSEYNQVEY---FSNVKPDL 273 A + + + + P+L Sbjct: 258 LAKQGEELFKEKNCLSCHAVEPNDKRAEAARTAPNL 293 >UniRef50_C7M190 Cytochrome c oxidase subunit II n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M190_ACIFD Length = 257 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 79/244 (32%), Gaps = 17/244 (6%) Query: 11 GWLSLFAGTVLLSGCNSALLDP---KGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAW 67 G + A +L+ C G L F + V + + Sbjct: 21 GPAVVAAAGTVLAACKLPTFGAYTGNTVQGNATFHLWQGFFVASIFVGGITFALLIYAII 80 Query: 68 KYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPI 127 ++R + +E VPILI+ L T + + ++ + + Sbjct: 81 RFRRRG--DAIPKQVHGNTPLEIFYTAVPILIVAVLFFFTVRVENKVDAV----AKKPAL 134 Query: 128 TIEVVSMDWKWFFIYPEQGIATV-------NEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180 ++V + W W F+YP + + + P F++ SN V++ F +P Sbjct: 135 RVDVTAFQWGWKFVYPSYHVTEITQGPTGYPTLVLPVGETSTFRLVSNDVVHGFDLPNFD 194 Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 YA+ G+ ++ G + G + M F + F W+ + + Sbjct: 195 FSRYALPGVVNYFDFTPQHDASFVGRCSHLCGLYHADMLFYVKVV-SASQFMTWIHQQQG 253 Query: 241 SPNT 244 + Sbjct: 254 RASA 257 >UniRef50_B4WI06 Cytochrome c oxidase subunit 2 n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WI06_9SYNE Length = 341 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 99/314 (31%), Gaps = 61/314 (19%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLD-PKGQIGLEQRSLILTAFGLMLIVVIPAI 59 M + +L L G N+ L+ Q L T + + + Sbjct: 1 MNIPSPILTLLVGIFVTIASLWYGQNNGLMPVAASQEAELVDGLFSTMITIGFGLFLLVE 60 Query: 60 LMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKT--------T 111 + +++R + D + + +E V +P ++++ +++ ++ Sbjct: 61 GALLVAVFRFRRKDGDEGDGEHLEGNIPLEIVWTAIPAVVVLGISIYSFDIYTRMGGLEL 120 Query: 112 HALEPSKPLAHDEKPITIEVV--------------------------------------- 132 + P E + V Sbjct: 121 MKHDMGGPGKMVEVAYAADAVPGSSTSALGELPLEGDLLESDLSEGELISEAGLGAPVEM 180 Query: 133 ----------SMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ 182 + + + F YP E+ P + PV K+ + V+++F++P + Sbjct: 181 ADSALSINVQGLQYAFIFNYP--DGIVDGELHIPVDEPVELKLNAQDVLHAFWLPEFRVK 238 Query: 183 IYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSP 242 + G +TRL + A GTY + A GP GM+ + I + WV + + Sbjct: 239 QDMIPGQETRLVINAIREGTYPVVCAELCGPYHGGMRTQLIVH-SAEDYAAWVDERMAAL 297 Query: 243 NTMSDMAAFEKLAA 256 + +A+ AA Sbjct: 298 DNGEVIASLPTPAA 311 >UniRef50_Q9TAK4 Cytochrome c oxidase subunit 2 n=1 Tax=Cafeteria roenbergensis RepID=Q9TAK4_CAFRO Length = 285 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 79/242 (32%), Gaps = 54/242 (22%) Query: 28 ALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNK 87 P + + F +++++ + + + Y +H+ Sbjct: 18 GFQIPASPVMEGIVNFHHDLFFFLVVIIGFVAYVLWRSIVLFNSDANKVPYV--VTHAAA 75 Query: 88 VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIY----- 142 +E + +P +I++ +A+ ++ ++++ E +TI+V+ W W + + Sbjct: 76 LEIIWTILPAVILVLIAIPSFSLLYSMD-----EIVEPLLTIKVIGHQWYWSYEFVNPYY 130 Query: 143 ------------------------------------------PEQGIATVNEIAFPANTP 160 ++ + N++ P T Sbjct: 131 LYKDMLKLHGLSDLSKQFFSDDSGSVITYDSYMISNDDAVSREQRLLEVDNKLYLPVETN 190 Query: 161 VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKF 220 V VTS V++S+ +P LG +I A G + + PG + G + G M Sbjct: 191 VRLLVTSADVIHSWAVPSLGVKIDACPGRLNQTSIFVKRPGIFYGQCSEICGVNHGFMPI 250 Query: 221 KA 222 Sbjct: 251 VV 252 >UniRef50_Q83GL9 Cytochrome c oxidase subunit 2 n=2 Tax=Tropheryma whipplei RepID=Q83GL9_TROWT Length = 290 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 95/276 (34%), Gaps = 36/276 (13%) Query: 1 MRLRKYNKSLGWLSLFAGTVLLSGCN----SALLD-------PKGQIGLEQRSLILTAFG 49 + + + +SL + + +++ GC L + L A+ Sbjct: 8 LPVIRPIRSLLVVFVLTLSLVFVGCTTQQMHGFLPGFVEGESSVTETTQVYSDLWFNAWF 67 Query: 50 LMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWK 109 +++++ I M V +R D P ++ VE ++ +P++++ V + + Sbjct: 68 VLIVIGILVWAMVVVAVVVFRRKRSDTTLPPQVQYNLPVETLLTGLPLILVAVFFVFSIR 127 Query: 110 TTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATV------------------- 150 + A+ KP + I V+ W W F+Y + Sbjct: 128 VSDAVNLPKPAD-----VHIGVIGKQWAWDFVYFDSNTYFPGLQAQYIESSPGKVDESKL 182 Query: 151 NEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASY 210 + P N V + S V++SF+I + + G+ R++ G Y G A + Sbjct: 183 PVLYLPVNKKVEIDLRSRDVVHSFWIIDFLYKRDIVPGLTNRIYFTPTRIGEYRGKCAEF 242 Query: 211 SGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS 246 G S M F + + + +A + Sbjct: 243 CGEFHSAMLFVVKVV-TQEEYKKHMADLAGMGYIGT 277 >UniRef50_A1ZL76 Cytochrome c oxidase subunit 2 n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZL76_9SPHI Length = 305 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 88/274 (32%), Gaps = 52/274 (18%) Query: 12 WLSLFAGTVLLSGCNSA-----LLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 W+ G + + L + G + SL ++ ++LI+ + FA Sbjct: 2 WIFPLIGVIAAIWYSGEAAKNFLPEASSIHGQQTDSLFWSSTVVILIMFVITNAALFYFA 61 Query: 67 WKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKP 126 ++YR ++ + + ++K+E P +I+ L K + + Sbjct: 62 FRYRYKKENK--ASFFPENHKLEIAWTITPAIILTVLVFYGNKVWWDIM----GEVPKDA 115 Query: 127 ITIEVVSMDWKWFFIYP----------------------------EQGIATVNEIAFPAN 158 +E+V + W YP ++ P N Sbjct: 116 EVVEIVGQQFAWKTRYPGKDKKMGNYDYRLIDATNELGIDFGHKDANDDFVSGKLVLPVN 175 Query: 159 TPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEP------------GTYDGI 206 P+ FK+ + V++S F P ++ A+ GM T+ H + Y+ Sbjct: 176 RPILFKIRAKDVLHSVFAPHFRLKMDAVPGMPTQFHFTPTKTTAQMRSELGNPKFNYEIA 235 Query: 207 SASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ 240 G G M+ + A + +W A Sbjct: 236 CTEICGKGHYSMRLLVEVV-EEAEYKKWYASQSP 268 >UniRef50_B3RBU3 Cytochrome c oxidase subunit 2 n=28 Tax=Proteobacteria RepID=B3RBU3_CUPTR Length = 454 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 99/330 (30%), Gaps = 66/330 (20%) Query: 9 SLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWK 68 ++ + + A +VL + P + + + I I L W+ Sbjct: 6 AIALVVMVAASVLFHFLSPWWATPLASNWKQMDDTLTITLVITGIFFIGINLFVGYIVWR 65 Query: 69 YRA----SNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDE 124 +R + ++ N + W + + + +L + +P Sbjct: 66 FRHDAPHPRGGTGHRASYHPENSRLEL-WLIGGTTLGVILLLAPGLFVYADYVRP---PR 121 Query: 125 KPITIEVVSMDWKWFFIYP------------------------------EQGIATVNEIA 154 + + +EVV W W F +P + + E+ Sbjct: 122 EAMVMEVVGQQWSWAFRFPGKSGQLGASDARFVTGANPLGLDPDDPRGLDNIVIVGPEVH 181 Query: 155 FPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPG 214 P N PV + S V++ F++P +++ + GM T + G +D + A G G Sbjct: 182 LPLNQPVKVLLRSKDVLHDFYVPPFRARMNMVPGMVTSFWFTPTQTGRFDILCAQLCGVG 241 Query: 215 FSGMKFKAIATPDRAAFDQWVAKAKQSPNTMS---------------------------D 247 M+ + AAF+ W+AK + T++ Sbjct: 242 HYNMRGTV-VVEEPAAFEAWLAKQQTFAMTLAKAAAPPAAMAAAAPGAAGAAGTIEKGRA 300 Query: 248 MAAFEKLAAPSEYNQVEYFSNVKPDLFADV 277 +A + A + L+ Sbjct: 301 LAQSKGCAGCHSIDGNPGVGPTWKGLYGKT 330 >UniRef50_C5CLF6 Cytochrome c oxidase, subunit II n=5 Tax=Burkholderiales RepID=C5CLF6_VARPS Length = 322 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 25/220 (11%) Query: 113 ALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIA----TVNEIAFPANTPVYFKVTSN 168 + + + + +EV + W W Y E +A T NEI P PV + ++ Sbjct: 93 FTDRALARLSTDGALQLEVTAHQWWWEVRYVEPQVADSFMTANEIHVPTGRPVIVTLKAD 152 Query: 169 SVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDR 228 V++SF++P L + + G L+ A+ G Y G A + G + M F +A P Sbjct: 153 DVIHSFWVPSLAGKKDLIPGRTATLNFRADRDGIYRGQCAEFCGSQHALMAFFVLAEP-P 211 Query: 229 AAFDQWVAKAKQSPNTMSDMAAFEK--------LAAPSEYNQVEYFSNVKPDLFADVINK 280 + W A +++ ++ A + + P+L Sbjct: 212 ERYAAWAAAQRRTAGEPAEGQPLRGREIFMRSSCAMCHAIDGTSAQAVRGPNLTHLASRG 271 Query: 281 FMAHGKSM------------DMTQPEGEHSAHEGMEGMDM 308 +A G G + + DM Sbjct: 272 TLAAGSLANTPEDLRRWIADPQQVKPGTYMPATRLSSEDM 311 >UniRef50_Q167W2 Cytochrome c oxidase subunit 2 n=5 Tax=Rhodobacteraceae RepID=Q167W2_ROSDO Length = 304 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 57/265 (21%) Query: 26 NSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHS 85 ++ + + L ++ I+ + + A +Y A + +++H Sbjct: 35 AVGFQPAATELATDLQWLDGMILVIITIITLFVTALLAWVAIRYNAKRNPE--AASFTHH 92 Query: 86 NKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQ 145 VE VPI+I++F+ + K E +TI+V W W + Y ++ Sbjct: 93 TPVEIAWTVVPIVILVFIGAFSLPILF-----KQQEIPEADLTIKVTGYQWYWGYEYVDE 147 Query: 146 GIATVNEI----------AFPANTPVY--------------------------------- 162 G + + A P + V Sbjct: 148 GFEFESYMLGSPATLDENARPDDANVTPFVLDEHMEAKLIDAGYSRDEFLLATDTSVVVP 207 Query: 163 ------FKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 +VT+ V++++ IP G + A+ G L A G Y G + G + Sbjct: 208 VGATVVMQVTAADVIHAWTIPSFGVKQDAVPGRLAELWFNAEREGIYFGQCSELCGFYHA 267 Query: 217 GMKFKAIATPDRAAFDQWVAKAKQS 241 M A+ +W+A A++ Sbjct: 268 YMPITVKVV-SEEAYAEWLADAREE 291 >UniRef50_A8UU91 Cytochrome c oxidase subunit 2 n=3 Tax=Aquificaceae RepID=A8UU91_9AQUI Length = 272 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 90/263 (34%), Gaps = 35/263 (13%) Query: 7 NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66 + LG L L A L P + + L L +++ + ++ F Sbjct: 2 KRVLGLLLLSAFAFAGEANADVLARPY-DLWELIYKIWLF---LSVVIYAVVAIPSLIFM 57 Query: 67 WKYRASNKDAKYSPNWSHSNK-VEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEK 125 KYR + + + +EA+ VP++I+++LA + ++ E Sbjct: 58 VKYRYKPGEREVGDQEHEGHWGLEALWTIVPLIIVLYLATHGFALF-----TQMRKPPEN 112 Query: 126 PITIEVVSMDWKWFFIYPEQ------------------------GIATVNEIAFPANTPV 161 + ++V + W W F YP N + PA P+ Sbjct: 113 AMELKVTAFAWGWMFQYPNGKMVIAQAIKDTEDKKCKPDECYSVDGVFQNYVYVPAGVPI 172 Query: 162 YFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFK 221 +TS V++SF++ G + G T N+PG Y Y G S M Sbjct: 173 KAVLTSQDVIHSFYVQPAGVTQDMVPGRTTYTWFQINKPGEYWVFCREYCGQWHSRMFAM 232 Query: 222 AIATPDRAAFDQWVAKAKQSPNT 244 P + FD+W+ S Sbjct: 233 LKVVP-KEDFDKWLKGEVASLEE 254 >UniRef50_P98048 Cytochrome c oxidase subunit 2 n=4111 Tax=Metazoa RepID=COX2_YPOMA Length = 228 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 79/238 (33%), Gaps = 34/238 (14%) Query: 21 LLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 + + N L + + + +++++ I + + + + + Sbjct: 1 MATWNNLNLQNGASPLMEQIIFFHDHTLIILIMITILVGYLMINLFF-------NKYINR 53 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 +E + +P + +IF+A + IT++ + W W + Sbjct: 54 FLLEGQMIELIWTILPAITLIFIA-----LPSLRLLYLLDELNNPLITLKSIGHQWYWSY 108 Query: 141 IYPEQG---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 Y + + N I P N + VT+ V++S+ +P L Sbjct: 109 EYSDFNNIQFDSYMIPSKEMKFNEFRLLDVDNRIILPMNNQIRIMVTATDVIHSWTVPSL 168 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAK 237 G +I A G + + N PG + G + G S M I + F +W+ Sbjct: 169 GVKIDANPGRLNQTNFFINRPGLFYGQCSEICGANHSFMPI-VIESISINNFIKWINN 225 >UniRef50_A3IST1 Cytochrome c oxidase subunit 2 n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IST1_9CHRO Length = 302 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 97/294 (32%), Gaps = 29/294 (9%) Query: 3 LRKYNKSLGWLSLFAGTVLLS---GCNS--ALLDPKGQIGLEQRSLILTAFGLMLIVVIP 57 + + + + A +++S G + + +L L V + Sbjct: 1 MTQLLEKIALFICVAVAIIISYWLGQQAYHWMPIAATAEAKHVDNLFSFLVSLGTFVFLG 60 Query: 58 AILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALE-- 115 + M + RA+ D + ++E +P +++++ + L+ Sbjct: 61 VVGMILFSIITCRAAENDYTEGHPSRGNARLEFFWTAIPTFLVLWIGWQSLTIYQELDLE 120 Query: 116 ------------------PSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPA 157 + IEV++ W+W F Y + I T +E+ P Sbjct: 121 GLNKIIDLKASNRSETPATLVAQTNPNFIEEIEVIAKQWEWTFHYSQANITT-SELHLPQ 179 Query: 158 NTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSG 217 N PV + + V++ F++P + + + G Y + +SG F+ Sbjct: 180 NQPVRLILEAEDVIHGFYVPEFRFKQDIIPNHPLDFTFTPQKQGKYKLHDSQFSGTYFAL 239 Query: 218 MKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKP 271 M+ + QW+ + + A + PS+ ++ VKP Sbjct: 240 MEADV-YIDSPEGYRQWLNSTENKEIKANLAAT--EYTHPSQQLIQSHWPTVKP 290 >UniRef50_C1IWC1 Cytochrome c oxidase subunit 2 n=2 Tax=Dermatophagoides RepID=C1IWC1_DERPT Length = 251 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 21 LLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 + S + D E +M V+I + + + + Sbjct: 1 MPSWMSLNFQDSSSPSMGELSVFHDHVVVVMSGVIILISYIMIYMLYSVKFYKN------ 54 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 S +E + VP ++I L + + K + +E K ++ +V++ W W + Sbjct: 55 -LSEGTFIETIWSIVPAFLLIILVLPSMKVLYFMEDVK-----TPSLSFKVIAHQWYWSY 108 Query: 141 -------------------IYPEQGIATVN-----------EIAFPANTPVYFKVTSNSV 170 Y + + ++ P N+ ++S V Sbjct: 109 VVPLFKNFSFKVNGTSLLSSYEYDSLLEDDVNAPRLLGCSSDLVIPLNSVSRLLISSTDV 168 Query: 171 MNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATP 226 ++SF +P LG ++ A G +L + G + G + G S M P Sbjct: 169 IHSFAVPSLGLKVDAFPGRINQLFVNPVRLGNFYGQCSEICGSNHSFMPISMKVVP 224 >UniRef50_A8B0L6 Cytochrome c oxidase subunit 2 n=23 Tax=Pancrustacea RepID=A8B0L6_9DIPT Length = 231 Score = 161 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 80/237 (33%), Gaps = 36/237 (15%) Query: 21 LLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSP 80 + + + LD + +M + I + + Sbjct: 1 MATWGSLLFLDAISPTMEQIIFFHDHVMIVMSAITIMVGGQMLTMLMM-------NIKNF 53 Query: 81 NWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFF 140 + + +E + P +++I L + + + E K + T++V+ W W + Sbjct: 54 YMTSGDSMEMIWILAPAVVVISLVYPSLRLLYMSESYKV----DPHSTVKVIGHQWYWSY 109 Query: 141 IYPEQG---------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL 179 Y + N +A P + + +TS+ V++S+ +P L Sbjct: 110 EYGIFKSLQFDSYMIATDQLNDNEFRLLDVDNRLALPISERIRMIITSSDVLHSWAVPSL 169 Query: 180 GSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVA 236 G +I A G ++ ++ + G Y G + G S M A P+ +W+ Sbjct: 170 GVKIDAAPGRLNQVMMMIYQSGLYYGQCSEICGANHSFMPIVVQAMPE----FKWLK 222 >UniRef50_C6UNA4 Cytochrome c oxidase subunit 2 n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UNA4_HODCD Length = 244 Score = 161 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 75/235 (31%), Gaps = 35/235 (14%) Query: 37 GLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR-ASNKDAKYSPNWSHSNKVEAVVWTV 95 ++ L+ L+L + + + +R K + S S +E + Sbjct: 1 MVQTAQLMQRTNALLLPISVITPIAIAALCAAFRGKRANAPKGAGGVSASAPLEMAWTAL 60 Query: 96 PILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQG--------- 146 P+ ++ + + K K + V + W W + Y G Sbjct: 61 PLALLASICAPSLKVLRYQLARKRR----PFAIVRVTAHQWYWRYDYVVDGKRLGFNSAA 116 Query: 147 --------------------IATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAM 186 +AT E+ PA V +TS V++SF +P G + A+ Sbjct: 117 LADNERVKFSKTNLAIYPKLLATDYELVLPARRVVRLLITSADVIHSFSVPSFGVKTDAI 176 Query: 187 AGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQS 241 G + +PG Y G A + G G + M + F W A S Sbjct: 177 PGKLNDTWIKVFQPGVYYGQCAEFCGVGHAFMPIGVRVV-SQREFKAWSKLALAS 230 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.133 0.381 Lambda K H 0.267 0.0409 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,785,877,232 Number of Sequences: 3077464 Number of extensions: 74898863 Number of successful extensions: 340949 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1179 Number of HSP's successfully gapped in prelim test: 254 Number of HSP's that attempted gapping in prelim test: 336425 Number of HSP's gapped (non-prelim): 1806 length of query: 315 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 187 effective length of database: 646,480,964 effective search space: 120891940268 effective search space used: 120891940268 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 93 (40.4 bits)