Job Description P0ABJ1 Confidence 100.00% Date Thu Jan 5 11:15:35 GMT 2012 Rank 7 Aligned Residues 158 % Identity 96% Template c1cyxA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:cyoa; PDBTitle: quinol oxidase (periplasmic fragment of subunit ii with2 engineered cu-a binding site)(cyoa) Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	I	T	I	E	V	V	S	M	D	W	K	W	F	F	I	Y	P	E	Q	G	I	A	T	V	N	E	I	A	F	P	A	N	T	P	V	Y	F	K	V	T	S	N	S	V	M	N	S	F	F	I	P	R	L	G	S	Q	I	Y	A	M	A	G	M	Q	T	R	L	H	L	I	A	N	E	P	G	T	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	I	T	I	E	V	V	S	M	D	W	K	W	F	F	I	Y	P	E	Q	G	I	A	T	V	N	E	I	A	F	P	A	N	T	P	V	Y	F	K	V	T	S	N	S	V	M	H	S	F	F	I	P	R	L	G	S	Q	I	Y	A	M	A	G	M	Q	T	R	L	H	L	I	A	N	E	P	G	T	Y	D
Template Known Secondary structure												T	T							T	T	T	T					S						T	T	S									S	S	S							G	G	G	T							T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	A	S	Y	S	G	P	G	F	S	G	M	K	F	K	A	I	A	T	P	D	R	A	A	F	D	Q	W	V	A	K	A	K	Q	S	P	N	T	M	S	D	M	A	A	F	E	K	L	A	A	P	S	E	Y	N	Q	V	E	Y	F	S	N	V	K	P	D	L	F	A	D	V	I	N	K	F	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	C	A	E	I	C	G	P	G	H	S	G	M	K	F	K	A	I	A	T	P	D	R	A	A	F	D	Q	W	V	A	K	A	K	Q	S	P	N	T	M	S	D	M	A	A	F	E	K	L	A	A	P	S	E	Y	N	Q	V	E	Y	F	S	N	V	K	P	D	L	F	A	D	V	I	N	K	F	M
Template Known Secondary structure						S			S	T	T	S	T	T									S	S													T		S			B		S									S			S	S							S		B		T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions