Phyre 2 alignment of P07117 with c3ajbB_

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Job Description | P07117
Confidence | 3.46% | Date | Thu Jan 5 11:00:11 GMT 2012
Rank | 42 | Aligned Residues | 26
% Identity | 19% | Template | c3ajbB_
PDB info | PDB header:protein transport | Chain: B: PDB Molecule:peroxisomal biogenesis factor 19; | PDBTitle: crystal structure of human pex3p in complex with n-terminal pex19p2 peptide
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | A | A | M | Q | K | R | F | A | E | A | D | A | H | Y | H | S | A | P | P | S | R | L | Q | E | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | R | E | L | E | E | L | L | E | S | A | L | D | D | F | D | K | A | K | P | S | P | A | P | P | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  | T | S |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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