BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (226 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q7VRR0 Ribonuclease 3 n=8 Tax=Gammaproteobacteria RepID... 306 3e-82 UniRef50_Q47WP5 Ribonuclease 3 n=310 Tax=Proteobacteria RepID=RN... 301 9e-81 UniRef50_B0USS1 Ribonuclease 3 n=5 Tax=Gammaproteobacteria RepID... 271 9e-72 UniRef50_D0STQ6 Ribonuclease III n=1 Tax=Acinetobacter lwoffii S... 234 2e-60 UniRef50_Q3KHL9 Ribonuclease 3 n=16 Tax=Gammaproteobacteria RepI... 232 8e-60 UniRef50_A9KFA0 Ribonuclease 3 n=6 Tax=Coxiella burnetii RepID=R... 231 9e-60 UniRef50_UPI0000E0E146 ribonuclease III n=1 Tax=Glaciecola sp. H... 227 2e-58 UniRef50_Q1YS28 Ribonuclease III n=1 Tax=gamma proteobacterium H... 227 2e-58 UniRef50_B2I604 Ribonuclease 3 n=12 Tax=Bacteria RepID=RNC_XYLF2 227 3e-58 UniRef50_Q2Y871 Ribonuclease III n=2 Tax=Proteobacteria RepID=Q2... 226 5e-58 UniRef50_D0L0J9 Ribonuclease III n=2 Tax=Gammaproteobacteria Rep... 223 3e-57 UniRef50_B3R1Z9 Ribonuclease 3 n=139 Tax=Bacteria RepID=RNC_CUPTR 218 8e-56 UniRef50_Q3SH50 Ribonuclease 3 n=11 Tax=Proteobacteria RepID=RNC... 217 2e-55 UniRef50_A5EV51 Ribonuclease III n=2 Tax=Cardiobacteriaceae RepI... 217 3e-55 UniRef50_C1D7L4 Rnc n=2 Tax=Proteobacteria RepID=C1D7L4_LARHH 212 8e-54 UniRef50_A4VIX5 Ribonuclease III n=2 Tax=Proteobacteria RepID=A4... 211 1e-53 UniRef50_A1AWQ6 Ribonuclease III n=3 Tax=Gammaproteobacteria Rep... 210 4e-53 UniRef50_UPI0000E87AF2 ribonuclease III n=1 Tax=Methylophilales ... 203 4e-51 UniRef50_Q4FUV6 Ribonuclease 3 n=11 Tax=Gammaproteobacteria RepI... 198 1e-49 UniRef50_Q0AF70 Ribonuclease 3 n=4 Tax=Proteobacteria RepID=RNC_... 195 1e-48 UniRef50_B4RJT7 Ribonuclease 3 n=30 Tax=Neisseriaceae RepID=RNC_... 191 1e-47 UniRef50_C5CSF5 Ribonuclease 3 n=6 Tax=Burkholderiales RepID=RNC... 189 6e-47 UniRef50_A7NAR0 Ribonuclease 3 n=18 Tax=Francisella RepID=RNC_FRATF 188 1e-46 UniRef50_C8PUU2 Ribonuclease III n=4 Tax=Gammaproteobacteria Rep... 179 4e-44 UniRef50_A0L633 Ribonuclease 3 n=1 Tax=Magnetococcus sp. MC-1 Re... 179 9e-44 UniRef50_B3T0T1 Putative RNase3 domain protein n=2 Tax=prokaryot... 176 4e-43 UniRef50_B9ZJG8 Ribonuclease III n=1 Tax=Thioalkalivibrio sp. K9... 172 1e-41 UniRef50_A6GP51 Ribonuclease III n=1 Tax=Limnobacter sp. MED105 ... 171 2e-41 UniRef50_B1LTR3 Ribonuclease III n=11 Tax=Alphaproteobacteria Re... 170 4e-41 UniRef50_A4J683 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_D... 164 2e-39 UniRef50_B8CWW9 Ribonuclease III n=1 Tax=Halothermothrix orenii ... 162 1e-38 UniRef50_Q8R9W3 Ribonuclease 3 n=37 Tax=Bacteria RepID=RNC_THETN 161 2e-38 UniRef50_B2KC89 Ribonuclease III n=1 Tax=Elusimicrobium minutum ... 161 2e-38 UniRef50_Q0F3I4 Ribonuclease III n=1 Tax=Mariprofundus ferrooxyd... 159 7e-38 UniRef50_B1C8X8 Putative uncharacterized protein n=1 Tax=Anaerof... 158 1e-37 UniRef50_B4RCU4 Ribonuclease 3 n=6 Tax=Caulobacteraceae RepID=RN... 158 2e-37 UniRef50_A8TKF3 SsrA-binding protein n=1 Tax=alpha proteobacteri... 157 3e-37 UniRef50_Q39T82 Ribonuclease 3 n=5 Tax=Geobacter RepID=RNC_GEOMG 157 3e-37 UniRef50_B2A2N1 Ribonuclease 3 n=1 Tax=Natranaerobius thermophil... 154 2e-36 UniRef50_Q5LZ68 Ribonuclease 3 n=100 Tax=cellular organisms RepI... 154 2e-36 UniRef50_C7NB47 Ribonuclease III n=1 Tax=Leptotrichia buccalis C... 154 3e-36 UniRef50_A0NMB9 Ribonuclease III n=2 Tax=Rhodobacteraceae RepID=... 153 4e-36 UniRef50_C8W586 Ribonuclease III n=2 Tax=Clostridia RepID=C8W586... 152 6e-36 UniRef50_A1WMW1 Ribonuclease 3 n=1 Tax=Verminephrobacter eisenia... 152 6e-36 UniRef50_C0QYN3 Ribonuclease III n=1 Tax=Brachyspira hyodysenter... 152 7e-36 UniRef50_Q3A4Q8 Ribonuclease 3 n=1 Tax=Pelobacter carbinolicus D... 151 2e-35 UniRef50_B7JZ63 Ribonuclease III n=3 Tax=Cyanobacteria RepID=B7J... 151 2e-35 UniRef50_Q2W513 DsRNA-specific ribonuclease n=2 Tax=Magnetospiri... 150 2e-35 UniRef50_B9XI61 Ribonuclease III n=1 Tax=bacterium Ellin514 RepI... 150 3e-35 UniRef50_A5D1H6 Ribonuclease 3 n=3 Tax=Peptococcaceae RepID=RNC_... 149 5e-35 UniRef50_C5SLX4 Ribonuclease III n=1 Tax=Asticcacaulis excentric... 149 5e-35 UniRef50_D1ALH0 Ribonuclease III n=7 Tax=Fusobacteriaceae RepID=... 149 6e-35 UniRef50_B1H0Q0 Ribonuclease III n=1 Tax=uncultured Termite grou... 148 1e-34 UniRef50_A8SMU0 Putative uncharacterized protein n=1 Tax=Parvimo... 148 1e-34 UniRef50_C1Q9X5 Ribonuclease III n=1 Tax=Brachyspira murdochii D... 148 1e-34 UniRef50_D1CFY1 Ribonuclease III n=1 Tax=Thermobaculum terrenum ... 148 1e-34 UniRef50_C0GHL1 Ribonuclease III n=1 Tax=Dethiobacter alkaliphil... 148 2e-34 UniRef50_Q9ZLH2 Ribonuclease 3 n=45 Tax=Epsilonproteobacteria Re... 147 2e-34 UniRef50_Q6ANV0 Ribonuclease 3 n=2 Tax=Desulfobulbaceae RepID=RN... 147 2e-34 UniRef50_UPI000174552F putative Ribonuclease III n=1 Tax=Verruco... 146 5e-34 UniRef50_B6WR93 Putative uncharacterized protein n=1 Tax=Desulfo... 145 8e-34 UniRef50_UPI00016BFC87 Ribonuclease III n=1 Tax=Epulopiscium sp.... 145 1e-33 UniRef50_A9WJ69 Ribonuclease 3 n=3 Tax=Chloroflexus RepID=RNC_CHLAA 145 1e-33 UniRef50_D1AY72 Ribonuclease III n=1 Tax=Streptobacillus monilif... 145 1e-33 UniRef50_A8ZZF3 Ribonuclease III n=1 Tax=Desulfococcus oleovoran... 144 2e-33 UniRef50_Q8RGX3 Ribonuclease 3 n=10 Tax=Fusobacterium RepID=RNC_... 144 2e-33 UniRef50_Q5GTI3 Ribonuclease 3 n=17 Tax=Rickettsiales RepID=RNC_... 144 2e-33 UniRef50_D0GJ73 Ribonuclease III n=2 Tax=Leptotrichia RepID=D0GJ... 144 3e-33 UniRef50_B6IN01 Ribonuclease III n=1 Tax=Rhodospirillum centenum... 143 4e-33 UniRef50_C9RJ88 Ribonuclease III n=1 Tax=Fibrobacter succinogene... 143 4e-33 UniRef50_A9B5J8 Ribonuclease III n=1 Tax=Herpetosiphon aurantiac... 143 5e-33 UniRef50_B5JG37 Ribonuclease III n=1 Tax=Verrucomicrobiae bacter... 142 8e-33 UniRef50_B0VFA5 DsRNA-specific ribonuclease n=1 Tax=Candidatus C... 142 1e-32 UniRef50_D1ATS9 Ribonuclease 3 n=1 Tax=Anaplasma centrale str. I... 142 1e-32 UniRef50_Q0AYW0 Ribonuclease 3 n=1 Tax=Syntrophomonas wolfei sub... 141 1e-32 UniRef50_Q72C44 Ribonuclease 3 n=9 Tax=Desulfovibrionaceae RepID... 141 2e-32 UniRef50_Q2GIW0 Ribonuclease 3 n=17 Tax=Anaplasmataceae RepID=RN... 140 2e-32 UniRef50_Q3AC58 Ribonuclease 3 n=1 Tax=Carboxydothermus hydrogen... 140 3e-32 UniRef50_Q0SMF0 Ribonuclease 3 n=21 Tax=Borrelia RepID=RNC_BORAP 140 3e-32 UniRef50_C3PH92 Ribonuclease III n=12 Tax=Corynebacterium RepID=... 140 3e-32 UniRef50_B1ZYU8 Ribonuclease III n=2 Tax=Opitutaceae RepID=B1ZYU... 140 4e-32 UniRef50_C8X2M7 Ribonuclease III n=4 Tax=Desulfovibrionales RepI... 140 4e-32 UniRef50_O69161 Ribonuclease 3 n=2 Tax=Alphaproteobacteria RepID... 140 4e-32 UniRef50_C6V631 Ribonuclease III n=2 Tax=Neorickettsia RepID=C6V... 140 4e-32 UniRef50_B0K1V8 Ribonuclease III n=19 Tax=Clostridia RepID=B0K1V... 140 4e-32 UniRef50_A0LGM1 Ribonuclease 3 n=1 Tax=Syntrophobacter fumaroxid... 140 4e-32 UniRef50_B2S448 Ribonuclease 3 n=2 Tax=Treponema pallidum RepID=... 139 7e-32 UniRef50_A1APX0 Ribonuclease III n=1 Tax=Pelobacter propionicus ... 139 8e-32 UniRef50_Q4JUY7 Ribonuclease 3 n=9 Tax=Corynebacterium RepID=RNC... 139 8e-32 UniRef50_C0QLB1 Two domain fusion protein n=1 Tax=Desulfobacteri... 139 1e-31 UniRef50_D2LJ11 Ribonuclease III n=1 Tax=Rhodomicrobium vannieli... 139 1e-31 UniRef50_B8FKR2 Ribonuclease III n=1 Tax=Desulfatibacillum alken... 139 1e-31 UniRef50_D2RKZ6 Ribonuclease III n=2 Tax=Acidaminococcus RepID=D... 138 1e-31 UniRef50_A5IN74 Ribonuclease 3 n=8 Tax=Thermotogaceae RepID=RNC_... 138 1e-31 UniRef50_C8PI53 Ribonuclease III n=1 Tax=Campylobacter gracilis ... 138 1e-31 UniRef50_A4GHU1 Ribonuclease III n=1 Tax=uncultured marine bacte... 138 2e-31 UniRef50_Q6MLR5 Ribonuclease 3 n=1 Tax=Bdellovibrio bacteriovoru... 137 2e-31 UniRef50_Q0APC4 Ribonuclease III n=2 Tax=Hyphomonadaceae RepID=Q... 137 2e-31 UniRef50_C7LRK0 Ribonuclease III n=1 Tax=Desulfomicrobium bacula... 137 3e-31 UniRef50_Q47S78 Ribonuclease 3 n=73 Tax=Actinobacteria (class) R... 137 4e-31 UniRef50_Q2LVR4 Ribonuclease III n=1 Tax=Syntrophus aciditrophic... 136 4e-31 UniRef50_A7BCY7 Putative uncharacterized protein n=1 Tax=Actinom... 136 5e-31 UniRef50_B4WL11 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7... 136 5e-31 UniRef50_D1B4H0 Ribonuclease III n=5 Tax=Campylobacterales RepID... 135 7e-31 UniRef50_C8NEF3 Ribonuclease III n=2 Tax=Granulicatella RepID=C8... 135 7e-31 UniRef50_C4FT63 Putative uncharacterized protein n=1 Tax=Catonel... 135 8e-31 UniRef50_A3EU88 Ribonuclease III n=2 Tax=Leptospirillum sp. Grou... 135 8e-31 UniRef50_C9L8J0 Ribonuclease III n=4 Tax=Clostridiales RepID=C9L... 135 1e-30 UniRef50_C6XJG5 Ribonuclease III n=1 Tax=Hirschia baltica ATCC 4... 135 1e-30 UniRef50_B0S1M6 Ribonuclease III n=2 Tax=Finegoldia magna RepID=... 135 2e-30 UniRef50_Q1Q4S0 Similar to ribonuclease III n=1 Tax=Candidatus K... 134 2e-30 UniRef50_Q1NXA7 Ribonuclease III n=2 Tax=delta proteobacterium M... 133 5e-30 UniRef50_B3DV16 Ribonuclease III n=2 Tax=Verrucomicrobia RepID=B... 133 5e-30 UniRef50_Q67PF5 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_S... 133 5e-30 UniRef50_B0PD50 Putative uncharacterized protein n=1 Tax=Anaerot... 133 6e-30 UniRef50_A0YTE9 Ribonuclease III n=1 Tax=Lyngbya sp. PCC 8106 Re... 132 7e-30 UniRef50_Q1JXG8 Ribonuclease III n=1 Tax=Desulfuromonas acetoxid... 132 8e-30 UniRef50_C3RKG6 Ribonuclease III n=5 Tax=Bacteria RepID=C3RKG6_9... 132 1e-29 UniRef50_B9M911 Ribonuclease III n=1 Tax=Geobacter sp. FRC-32 Re... 132 1e-29 UniRef50_A5V230 Ribonuclease 3 n=2 Tax=Roseiflexus RepID=RNC_ROSS1 132 1e-29 UniRef50_C2KW20 Ribonuclease III n=1 Tax=Oribacterium sinus F026... 132 1e-29 UniRef50_C4V2U1 Ribonuclease III n=1 Tax=Selenomonas flueggei AT... 131 1e-29 UniRef50_A6DSV3 Ribonuclease III n=1 Tax=Lentisphaera araneosa H... 131 1e-29 UniRef50_Q3ZXY9 Ribonuclease 3 n=5 Tax=Dehalococcoides RepID=RNC... 131 2e-29 UniRef50_A4XJW5 Ribonuclease III n=2 Tax=Clostridia RepID=A4XJW5... 131 2e-29 UniRef50_A4GK15 Ribonuclease III n=1 Tax=uncultured marine bacte... 131 2e-29 UniRef50_Q027L3 Ribonuclease 3 n=1 Tax=Candidatus Solibacter usi... 131 2e-29 UniRef50_A6LNE7 Ribonuclease III n=2 Tax=Thermosipho RepID=A6LNE... 130 2e-29 UniRef50_C9LMI7 Ribonuclease III n=1 Tax=Dialister invisus DSM 1... 130 3e-29 UniRef50_B0TGW4 Ribonuclease 3 n=1 Tax=Heliobacterium modestical... 130 3e-29 UniRef50_D0MGH0 Ribonuclease III n=1 Tax=Rhodothermus marinus DS... 130 4e-29 UniRef50_D1N9T0 Ribonuclease III n=1 Tax=Victivallis vadensis AT... 130 4e-29 UniRef50_D0LWB5 Ribonuclease III n=1 Tax=Haliangium ochraceum DS... 129 5e-29 UniRef50_B9E1G8 Ribonuclease 3 n=35 Tax=Clostridium RepID=RNC_CLOK1 129 7e-29 UniRef50_B3E2K4 Ribonuclease III n=1 Tax=Geobacter lovleyi SZ Re... 129 8e-29 UniRef50_A4WVP5 Ribonuclease 3 n=44 Tax=Rhodobacterales RepID=RN... 129 8e-29 UniRef50_D0WNC5 Ribonuclease III n=1 Tax=Actinomyces sp. oral ta... 129 9e-29 UniRef50_C7GYL4 Ribonuclease III n=1 Tax=Eubacterium saphenum AT... 129 1e-28 UniRef50_D1C6L4 Ribonuclease III n=1 Tax=Sphaerobacter thermophi... 128 1e-28 UniRef50_C6HXB9 Ribonuclease III n=1 Tax=Leptospirillum ferrodia... 128 2e-28 UniRef50_D1VB32 Ribonuclease III n=1 Tax=Frankia sp. EuI1c RepID... 127 2e-28 UniRef50_Q2IIE0 Ribonuclease III n=5 Tax=Cystobacterineae RepID=... 127 2e-28 UniRef50_Q73NX5 Ribonuclease 3 n=2 Tax=Treponema RepID=RNC_TREDE 127 2e-28 UniRef50_C5QRI2 Ribonuclease III n=2 Tax=Staphylococcus RepID=C5... 127 3e-28 UniRef50_B8E199 Ribonuclease III n=1 Tax=Dictyoglomus turgidum D... 127 3e-28 UniRef50_Q3SRB3 Ribonuclease 3 n=17 Tax=Rhizobiales RepID=RNC_NITWN 127 4e-28 UniRef50_C9KQ86 Ribonuclease III n=4 Tax=Clostridiales RepID=C9K... 127 4e-28 UniRef50_Q1D5X9 Ribonuclease 3 n=1 Tax=Myxococcus xanthus DK 162... 127 4e-28 UniRef50_C1SM31 Ribonuclease III n=1 Tax=Denitrovibrio acetiphil... 126 4e-28 UniRef50_Q8CPI1 Ribonuclease 3 n=63 Tax=Staphylococcaceae RepID=... 126 4e-28 UniRef50_Q6MEK1 Ribonuclease 3 n=2 Tax=Parachlamydiaceae RepID=R... 126 5e-28 UniRef50_Q053L4 Ribonuclease 3 n=4 Tax=Leptospira RepID=RNC_LEPBL 126 6e-28 UniRef50_A8GM79 Ribonuclease 3 n=6 Tax=Rickettsia RepID=RNC_RICAH 126 6e-28 UniRef50_B3QS76 Ribonuclease III n=1 Tax=Chloroherpeton thalassi... 125 8e-28 UniRef50_Q9Z5U2 Ribonuclease 3 n=9 Tax=Sphingomonadales RepID=RN... 125 9e-28 UniRef50_C2EW95 Ribonuclease III n=4 Tax=Lactobacillaceae RepID=... 125 1e-27 UniRef50_A5CEW8 Ribonuclease III n=2 Tax=Orientia tsutsugamushi ... 125 1e-27 UniRef50_C3P5Q0 Ribonuclease 3 n=173 Tax=cellular organisms RepI... 125 1e-27 UniRef50_D2QZC7 Ribonuclease III n=1 Tax=Pirellula staleyi DSM 6... 125 2e-27 UniRef50_D1BLX9 Ribonuclease III n=3 Tax=Veillonella RepID=D1BLX... 124 2e-27 UniRef50_B0SDK6 Ribonuclease III n=2 Tax=Leptospira biflexa sero... 124 2e-27 UniRef50_D1B5N5 Ribonuclease III n=1 Tax=Thermanaerovibrio acida... 124 3e-27 UniRef50_B4U7T8 Ribonuclease 3 n=3 Tax=Aquificaceae RepID=RNC_HYDS0 124 3e-27 UniRef50_C5NVE5 Ribonuclease III n=1 Tax=Gemella haemolysans ATC... 124 3e-27 UniRef50_Q0BTG2 Ribonuclease III n=12 Tax=Rhodospirillales RepID... 123 4e-27 UniRef50_D0RNU3 Ribonuclease III n=1 Tax=alpha proteobacterium H... 123 6e-27 UniRef50_Q2S2W4 Ribonuclease III n=1 Tax=Salinibacter ruber DSM ... 122 1e-26 UniRef50_C5CGL9 Ribonuclease III n=1 Tax=Kosmotoga olearia TBF 1... 122 1e-26 UniRef50_C1TMA2 Ribonuclease III n=1 Tax=Dethiosulfovibrio pepti... 121 2e-26 UniRef50_A5VKP2 Ribonuclease 3 n=25 Tax=Lactobacillus RepID=RNC_... 121 2e-26 UniRef50_C8NZK7 Ribonuclease III n=4 Tax=Erysipelotrichaceae Rep... 120 2e-26 UniRef50_C7RGT7 Ribonuclease III n=4 Tax=Anaerococcus RepID=C7RG... 120 3e-26 UniRef50_B9L2H4 Ribonuclease III n=1 Tax=Thermomicrobium roseum ... 120 3e-26 UniRef50_C8W741 Ribonuclease III n=3 Tax=Atopobium RepID=C8W741_... 120 4e-26 UniRef50_D0YUT0 Ribonuclease III n=3 Tax=Mobiluncus RepID=D0YUT0... 120 4e-26 UniRef50_Q8G7H1 Ribonuclease 3 n=20 Tax=Bifidobacteriaceae RepID... 120 4e-26 UniRef50_D0WEA4 Ribonuclease III n=1 Tax=Slackia exigua ATCC 700... 119 6e-26 UniRef50_C7N559 Ribonuclease III n=1 Tax=Slackia heliotrinireduc... 119 6e-26 UniRef50_Q3B6L3 Ribonuclease 3 n=9 Tax=Chlorobiaceae RepID=RNC_P... 119 8e-26 UniRef50_A8SP75 Putative uncharacterized protein n=2 Tax=Clostri... 119 8e-26 UniRef50_A0PQ48 Ribonuclease III Rnc n=2 Tax=Mycobacterium RepID... 118 1e-25 UniRef50_B5YDQ5 Ribonuclease III n=1 Tax=Dictyoglomus thermophil... 118 1e-25 UniRef50_A4E6T0 Putative uncharacterized protein n=3 Tax=Collins... 118 2e-25 UniRef50_A6C1C3 Ribonuclease III n=1 Tax=Planctomyces maris DSM ... 117 2e-25 UniRef50_A6G995 Ribonuclease III n=1 Tax=Plesiocystis pacifica S... 117 2e-25 UniRef50_Q2SRZ8 Ribonuclease 3 n=4 Tax=Mollicutes RepID=RNC_MYCCT 117 4e-25 UniRef50_A9FII1 Ribonuclease III n=2 Tax=Deltaproteobacteria Rep... 117 4e-25 UniRef50_Q1IJU6 Ribonuclease III n=1 Tax=Candidatus Koribacter v... 117 4e-25 UniRef50_A9WMX9 Ribonuclease III n=3 Tax=Micrococcaceae RepID=A9... 116 5e-25 UniRef50_P74368 Ribonuclease 3 n=1 Tax=Synechocystis sp. PCC 680... 116 7e-25 UniRef50_C8WGU4 Ribonuclease III n=2 Tax=Coriobacteriaceae RepID... 116 7e-25 UniRef50_UPI0000D54C0F dsRNA-specific ribonuclease n=1 Tax=Psych... 115 8e-25 UniRef50_Q53844 Ribonuclease 3 n=3 Tax=Mollicutes RepID=RNC_SPICI 115 1e-24 UniRef50_Q0C3T9 Ribonuclease III n=1 Tax=Hyphomonas neptunium AT... 115 1e-24 UniRef50_C0VZE3 Ribonuclease III n=1 Tax=Actinomyces coleocanis ... 115 1e-24 UniRef50_B2SAD9 Ribonuclease 3 n=62 Tax=Rhizobiales RepID=RNC_BRUA1 114 2e-24 UniRef50_D0LAL1 Ribonuclease III n=11 Tax=Actinomycetales RepID=... 114 2e-24 UniRef50_B0T3I0 Ribonuclease 3 n=3 Tax=Alphaproteobacteria RepID... 114 3e-24 UniRef50_B2UPF8 Ribonuclease III n=1 Tax=Akkermansia muciniphila... 114 3e-24 UniRef50_UPI00016C442D ribonuclease III n=1 Tax=Gemmata obscurig... 114 3e-24 UniRef50_B5W3I4 Ribonuclease III n=3 Tax=Cyanobacteria RepID=B5W... 114 4e-24 UniRef50_Q2NJY3 Ribonuclease 3 n=14 Tax=Candidatus Phytoplasma R... 112 7e-24 UniRef50_C7MDJ8 RNAse III n=1 Tax=Brachybacterium faecium DSM 48... 112 7e-24 UniRef50_UPI0001C16B2C Ribonuclease III n=2 Tax=Nostocaceae RepI... 112 8e-24 UniRef50_B1XKP4 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7... 112 8e-24 UniRef50_Q2RJX2 Ribonuclease 3 n=1 Tax=Moorella thermoacetica AT... 112 8e-24 UniRef50_Q049R1 DsRNA-specific ribonuclease n=4 Tax=Lactobacillu... 112 9e-24 UniRef50_Q8Z023 Ribonuclease 3 n=10 Tax=Cyanobacteria RepID=RNC_... 112 1e-23 UniRef50_C1ZAX4 RNAse III n=2 Tax=Planctomycetaceae RepID=C1ZAX4... 111 2e-23 UniRef50_B4S3N5 Ribonuclease III n=2 Tax=Chlorobiaceae RepID=B4S... 111 2e-23 UniRef50_Q1AW81 RNAse III n=1 Tax=Rubrobacter xylanophilus DSM 9... 110 3e-23 UniRef50_A9BIG2 Ribonuclease III n=1 Tax=Petrotoga mobilis SJ95 ... 110 5e-23 UniRef50_A9A9D4 Ribonuclease III n=4 Tax=Methanococcus maripalud... 109 7e-23 UniRef50_C1F8X7 Ribonuclease III n=1 Tax=Acidobacterium capsulat... 108 1e-22 UniRef50_Q83I82 Ribonuclease 3 n=2 Tax=Tropheryma whipplei RepID... 108 1e-22 UniRef50_Q1GTU3 Ribonuclease 3 n=1 Tax=Sphingopyxis alaskensis R... 108 1e-22 UniRef50_A3EQH6 Ribonuclease III n=3 Tax=Leptospirillum RepID=A3... 107 4e-22 UniRef50_Q7UGZ7 Ribonuclease 3 n=1 Tax=Rhodopirellula baltica Re... 105 8e-22 UniRef50_C3Y2N8 Putative uncharacterized protein n=1 Tax=Branchi... 105 1e-21 UniRef50_B6W6L3 Putative uncharacterized protein n=1 Tax=Anaeroc... 105 2e-21 UniRef50_Q4FLS9 Ribonuclease 3 n=3 Tax=Candidatus Pelagibacter R... 104 2e-21 UniRef50_UPI000180B1D8 PREDICTED: similar to ribonuclease III, n... 104 2e-21 UniRef50_D1Y4H6 Ribonuclease III n=1 Tax=Pyramidobacter piscolen... 103 5e-21 UniRef50_B2V6U0 Ribonuclease III n=4 Tax=Hydrogenothermaceae Rep... 102 8e-21 UniRef50_Q4A589 Ribonuclease 3 n=1 Tax=Mycoplasma synoviae 53 Re... 102 8e-21 UniRef50_Q03VW5 Ribonuclease 3 n=9 Tax=Lactobacillales RepID=RNC... 102 1e-20 UniRef50_Q6PF88 Rnasen protein (Fragment) n=15 Tax=Coelomata Rep... 102 1e-20 UniRef50_A5UJK3 Ribonuclease III (DsRNA-specific), Rnc n=2 Tax=M... 100 3e-20 UniRef50_Q9NRR4 Ribonuclease 3 n=53 Tax=Eumetazoa RepID=RNC_HUMAN 100 5e-20 UniRef50_UPI0001553722 PREDICTED: similar to ribonuclease III, n... 100 6e-20 UniRef50_O01326 Ribonuclease 3 n=3 Tax=Caenorhabditis RepID=RNC_... 99 7e-20 UniRef50_UPI0001C41B85 ribonuclease III Rnc n=1 Tax=Methanobrevi... 97 3e-19 UniRef50_Q46IK9 RNAse III n=2 Tax=Prochlorococcus marinus RepID=... 97 5e-19 UniRef50_A9NES4 DsRNA-specific ribonuclease III n=1 Tax=Acholepl... 97 5e-19 UniRef50_Q253V2 Ribonuclease 3 n=13 Tax=Chlamydiaceae RepID=RNC_... 96 6e-19 UniRef50_Q5FPZ7 Ribonuclease III n=1 Tax=Gluconobacter oxydans R... 96 7e-19 UniRef50_C7MY58 RNAse III n=13 Tax=Actinomycetales RepID=C7MY58_... 96 8e-19 UniRef50_B6K1P5 Double-strand-specific pac1 ribonuclease n=1 Tax... 96 1e-18 UniRef50_Q9S338 DsRNA-specific ribonuclease/ribonuclease III n=1... 94 4e-18 UniRef50_D1Y1Q3 Ribonuclease 3 (Ribonuclease III) (RNase III) (F... 94 4e-18 UniRef50_Q8A2E8 Ribonuclease 3 n=14 Tax=Bacteroidales RepID=RNC_... 94 5e-18 UniRef50_C7M0C4 Ribonuclease III n=1 Tax=Acidimicrobium ferrooxi... 93 7e-18 UniRef50_Q9PQT8 Ribonuclease 3 n=15 Tax=Ureaplasma RepID=RNC_UREPA 93 7e-18 UniRef50_C6VXT7 Ribonuclease III n=3 Tax=Flexibacteraceae RepID=... 93 7e-18 UniRef50_Q7MU11 Ribonuclease III n=2 Tax=Porphyromonas gingivali... 92 1e-17 UniRef50_B4WMQ9 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7... 92 2e-17 UniRef50_A4CTC0 Putative ribonuclease III n=1 Tax=Synechococcus ... 91 3e-17 UniRef50_Q3B0H4 RNAse III n=2 Tax=Synechococcus RepID=Q3B0H4_SYNS9 91 4e-17 UniRef50_C4XDU4 Putative uncharacterized protein n=1 Tax=Mycopla... 90 6e-17 UniRef50_A6KZ76 Ribonuclease 3 n=30 Tax=Bacteroidales RepID=RNC_... 89 8e-17 >UniRef50_Q7VRR0 Ribonuclease 3 n=8 Tax=Gammaproteobacteria RepID=RNC_BLOFL Length = 232 Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 149/223 (66%), Positives = 179/223 (80%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 + I IN LQ+KLGY F+ +LL +ALTHRS S+KHNERLEFLGDSIL+Y I N LYHR+ Sbjct: 4 IKCIEINLLQKKLGYFFHTVDLLLRALTHRSFSNKHNERLEFLGDSILNYSITNILYHRY 63 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 +DEGDMSR+R++LV TL ELA+EF+LG CL+LG GELK+ G+ RESILADTVEA+I Sbjct: 64 NHMDEGDMSRIRSSLVCSRTLVELAKEFKLGNCLKLGQGELKNKGYNRESILADTVEAII 123 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 GG+FLDS+I+T+E LI WYQ RL++I DKQKDPKTRLQEYLQ HLPLP Y + QV+ Sbjct: 124 GGIFLDSNIKTIEMLIAFWYQFRLNKIDLEDKQKDPKTRLQEYLQHHHLPLPIYCINQVQ 183 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G+AHDQ F ++CQVS L V+G GSSRRKAEQ AAE ALK L Sbjct: 184 GQAHDQIFIMNCQVSSLKYSVMGRGSSRRKAEQDAAENALKFL 226 >UniRef50_Q47WP5 Ribonuclease 3 n=310 Tax=Proteobacteria RepID=RNC_COLP3 Length = 266 Score = 301 bits (772), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 143/226 (63%), Positives = 179/226 (79%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 +NP + RL +KLGY FN LL QALTHRSA HNERLEFLGDSIL +VIA ALY +F Sbjct: 3 INPHNLARLTKKLGYEFNEPLLLVQALTHRSAKGAHNERLEFLGDSILGFVIAEALYDKF 62 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P+ DEGD++RMR++LV+G TLAE+AR+F LGECL LGPGELKSGG RESIL D +EA+I Sbjct: 63 PKHDEGDLTRMRSSLVKGVTLAEVARDFNLGECLILGPGELKSGGHHRESILEDAIEAII 122 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G V+LDS+I+ + LIL+W++ RL I PG++QKDPKTRLQE+LQGR +PLPTY V+ Sbjct: 123 GAVYLDSNIECCKALILSWFERRLMVIKPGNEQKDPKTRLQEFLQGRKIPLPTYEVIDTT 182 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G++H+QEFT+ CQ S +SE V+ G+SRRKAEQ AA+Q L +E E Sbjct: 183 GQSHNQEFTVRCQTSVISEVVIAKGTSRRKAEQEAAQQILALIEKE 228 >UniRef50_B0USS1 Ribonuclease 3 n=5 Tax=Gammaproteobacteria RepID=RNC_HAES2 Length = 223 Score = 271 bits (694), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 126/221 (57%), Positives = 174/221 (78%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 + +LQ+KLG+ F + + L+QALTHRSA++ +NERLEFLGDSIL++ I ALY +FP+ +E Sbjct: 3 LEKLQKKLGHQFTNLDYLKQALTHRSAAAFNNERLEFLGDSILNFAIGKALYEKFPKSNE 62 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G++SRMRATLV+ TLA +AR+ ELG+ L+LG GELKSGGFRRESIL+D VEALI ++L Sbjct: 63 GELSRMRATLVKEQTLAVVARQVELGDYLKLGAGELKSGGFRRESILSDCVEALIAAIYL 122 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ I + WYQ L++I PG+ QKDPKTRLQE+LQG L LP Y V++++G+AH+ Sbjct: 123 DAGIDVALARVYQWYQELLEQIKPGEAQKDPKTRLQEFLQGHRLKLPEYEVIEIKGDAHN 182 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Q F + C+V L++ V G G+SRRKAEQ AA+QA++KL+++ Sbjct: 183 QSFRVSCKVETLTDVVFGQGTSRRKAEQHAAQQAIEKLKIK 223 >UniRef50_D0STQ6 Ribonuclease III n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STQ6_ACILW Length = 232 Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 118/219 (53%), Positives = 156/219 (71%), Gaps = 3/219 (1%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEG 66 RL +++GY F +LL+ ALTHRS S KHN ERLEFLGDS+L +IAN L++ +P +EG Sbjct: 12 RLAKRIGYQFKQADLLKLALTHRSVSHKHNYERLEFLGDSLLGMIIANYLFNAYPSENEG 71 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++RMRATLVR L ++A + +L + L L GELKSGG RESILADTVEA+IG +++D Sbjct: 72 RLTRMRATLVRQEALGKIANDLKLSQNLILSTGELKSGGHHRESILADTVEAIIGAIYVD 131 Query: 127 S-DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ +E ++L WY+ LD I P D+ KDPK+RLQEYLQ R PLP Y VV ++G+A + Sbjct: 132 CGDLTVLEPIVLKWYEPYLDHIEPTDQLKDPKSRLQEYLQARKKPLPVYEVVDIQGDAPN 191 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 Q F + CQ++GL + G G+SRR AEQA A LK LE Sbjct: 192 QHFKVECQIAGLPT-MQGEGASRRFAEQAVAADILKLLE 229 >UniRef50_Q3KHL9 Ribonuclease 3 n=16 Tax=Gammaproteobacteria RepID=RNC_PSEPF Length = 229 Score = 232 bits (591), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 115/211 (54%), Positives = 151/211 (71%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPR 62 + ++RL+R+LGYTF QEL+ ALTHRS + ++NERLEFLGD+IL++V AL+ RFP Sbjct: 2 SVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFPL 61 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG +SR+RA LV+G TLA LAR F+LG+ LRLG GELKSGGFRRESILAD +EALIG Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIGA 121 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 ++LD+ ++ + +L W + ++ D KDPKTRLQE+LQ R LP Y VV ++GE Sbjct: 122 IYLDAGMEVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQGE 181 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 H + F + C+V L+E G G SRR AEQ Sbjct: 182 PHCRTFFVECEVVLLNEKSRGQGVSRRIAEQ 212 >UniRef50_A9KFA0 Ribonuclease 3 n=6 Tax=Coxiella burnetii RepID=RNC_COXBN Length = 233 Score = 231 bits (590), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 110/219 (50%), Positives = 162/219 (73%), Gaps = 1/219 (0%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 +N+L +LG+ FN+ ELL+ ALTHRS+ + +NERLEFLGDS+L ++IA+ LY R P+ E Sbjct: 4 LNKLMERLGHQFNNLELLKIALTHRSSGADNNERLEFLGDSVLGFIIASELYQRRPQARE 63 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 GD+SRMRA++V G+ LA+++ + + E L+LG GE KSGG RR SILAD +EA++G +++ Sbjct: 64 GDLSRMRASMVNGDELAQMSTKLGINEYLQLGVGEQKSGGKRRRSILADALEAIVGAIYI 123 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ ++T + +LNWY R+D++S +KD K+ LQE+LQ R LPLPTY V++ GEAH Sbjct: 124 DAGLETCRRCVLNWYGERVDDLSKLSPKKDAKSLLQEWLQARRLPLPTY-EVKITGEAHA 182 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 Q FT++C V GL G ++RR+AEQ AA++ L+ L+ Sbjct: 183 QTFTVNCYVKGLPHKTEGVNTTRRRAEQIAAKRFLELLD 221 >UniRef50_UPI0000E0E146 ribonuclease III n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E146 Length = 241 Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 155/224 (69%), Gaps = 2/224 (0%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 ++P V +LQR + Y FN LL+QALTH+SA +HNERLEFLGD++L ++ L+ F Sbjct: 18 IDPFV--KLQRLIDYQFNDVSLLKQALTHKSAHRQHNERLEFLGDAVLGMIVGEHLFKAF 75 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++RMR+ +V+G+TLAE+A E LGE ++LG GELKSGG +R SILAD VE++I Sbjct: 76 PNSPEGKLTRMRSAIVKGDTLAEIALEKGLGEFIQLGAGELKSGGKQRYSILADVVESII 135 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD+ + I W+ R+ ++ P KD KTRLQEYLQ R + LP Y VV ++ Sbjct: 136 GAIYLDAGMNQCYDFIHAWFGARIAKLDPDVHPKDAKTRLQEYLQSRGIELPVYEVVDIK 195 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G+ H+Q FT+ C LS+P+ G+SR++AEQ AA+ L+KL+ Sbjct: 196 GKDHNQTFTVSCNTVTLSDPIQAQGASRKRAEQIAAQLTLEKLQ 239 >UniRef50_Q1YS28 Ribonuclease III n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS28_9GAMM Length = 225 Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 112/217 (51%), Positives = 149/217 (68%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGD 67 +LQ +L Y F+ +LL AL+HRS S +NERLEFLGD++L I++ L+ RFP EGD Sbjct: 7 QLQDRLQYQFSDPQLLTLALSHRSCGSNNNERLEFLGDAVLGMAISSFLFQRFPEAREGD 66 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS 127 +SR+R+ +VR +LAE+AR+ +LG L LGPGE+KSGG RR+SIL DTVEAL+G VFLD Sbjct: 67 LSRIRSQVVRAESLAEIARKLDLGPELLLGPGEMKSGGHRRDSILGDTVEALLGAVFLDQ 126 Query: 128 DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 + VE + NW+ L+ ++ KD KT LQE+LQ R PLP Y VV+ GE H + Sbjct: 127 GLVAVEACVQNWFGASLNTLTLDTPVKDAKTALQEWLQARGKPLPEYRVVKTEGEDHSRL 186 Query: 188 FTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 FT+ C++ + E T SSRRKAEQ AE+ +KKLE Sbjct: 187 FTMSCKIDAVDETAEATASSRRKAEQLVAEKLVKKLE 223 >UniRef50_B2I604 Ribonuclease 3 n=12 Tax=Bacteria RepID=RNC_XYLF2 Length = 227 Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 110/215 (51%), Positives = 148/215 (68%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 Q+++GY F LL QAL HRSA + HNERLEFLGDS+++ +IA AL+ R+PR DEG ++ Sbjct: 10 QQRIGYVFTDPSLLLQALRHRSAGTPHNERLEFLGDSVVNLLIAEALFQRWPRADEGALT 69 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 R R+ LVR +LA +AR +LGE L LGPGELKSGG RR+SILAD VEA+I ++LD+D+ Sbjct: 70 RARSELVRETSLASIARTMQLGEQLILGPGELKSGGHRRDSILADAVEAVIAAIYLDADL 129 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 T ++L W++T L + G +KDPKTRLQE+LQ R LP Y ++ G+ H + F Sbjct: 130 ATCRTVVLPWFETALTALPVGKPEKDPKTRLQEWLQARQWSLPVYELIFESGDPHTKHFR 189 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + C + L G GSSRR AEQ AA A+ +L+ Sbjct: 190 VSCTLGELKLRTEGEGSSRRLAEQDAASHAIDQLD 224 >UniRef50_Q2Y871 Ribonuclease III n=2 Tax=Proteobacteria RepID=Q2Y871_NITMU Length = 230 Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 116/216 (53%), Positives = 148/216 (68%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 L RKLGYTF ELL+QALTHRS S HNERLEFLGD++L+ +A ++H FP + EG + Sbjct: 13 LCRKLGYTFRRPELLRQALTHRSHSIPHNERLEFLGDAVLNCAVAGLIFHHFPDLSEGSL 72 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD 128 SR+RA LV LAELA+ ELG+ +R G GELKSGG +R SILAD +EA+IG ++LD+ Sbjct: 73 SRIRANLVNQKMLAELAQTLELGKLIRFGEGELKSGGDKRPSILADALEAVIGAIYLDAG 132 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEF 188 + EK + N + L E++ KDPKT LQEYLQ R L LP Y VV RGEAH Q+F Sbjct: 133 FEQAEKTVENLFIPSLGELNTHALGKDPKTLLQEYLQSRKLALPRYAVVATRGEAHQQQF 192 Query: 189 TIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + C +S +G G+SRR AEQ AA QA ++L+ Sbjct: 193 QVECVISRPQIRTLGEGTSRRSAEQHAARQAYEQLQ 228 >UniRef50_D0L0J9 Ribonuclease III n=2 Tax=Gammaproteobacteria RepID=D0L0J9_HALNC Length = 243 Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 150/224 (66%), Gaps = 2/224 (0%) Query: 2 NPIVI--NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHR 59 +P V +L + +G TF ELL+ AL HRSA + +NERLEFLGD++L+ VIAN LY Sbjct: 8 SPFVTAPEKLAQHIGITFASPELLEMALRHRSAGNMNNERLEFLGDAVLNLVIANQLYTM 67 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 + EG++SR RA+LVR +LA +ARE +LG L LGPGELKSGGFRR+SILAD +EA Sbjct: 68 HSKATEGELSRWRASLVREESLAVIARELDLGSYLVLGPGELKSGGFRRDSILADALEAT 127 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG V+LD + L++ ++ L ++ KDPKTRLQE+LQG LP+Y V + Sbjct: 128 IGAVYLDQGFDVAQSLLVRLFERMLQDLPDAASLKDPKTRLQEWLQGSKRELPSYEVTTI 187 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 RG+AH Q F + C +S + VG GSSRRKAEQAAAE + L Sbjct: 188 RGQAHKQVFEVTCTLSDTQQTAVGRGSSRRKAEQAAAESMFEAL 231 >UniRef50_B3R1Z9 Ribonuclease 3 n=139 Tax=Bacteria RepID=RNC_CUPTR Length = 256 Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 109/204 (53%), Positives = 141/204 (69%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 ++ LQ++LGY F+ ELLQQALTHRS S++HNERLEFLGDS+L+ +A+ LY F ++DE Sbjct: 3 LDALQQRLGYRFSKPELLQQALTHRSHSAQHNERLEFLGDSVLNCAVADMLYGMFGKLDE 62 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 GD+SR+RA LV+ L E+A+ +L + LRLG GELKSGGFRR SILAD +EA++G VFL Sbjct: 63 GDLSRVRANLVKQQALYEIAQMLQLSDTLRLGEGELKSGGFRRPSILADALEAIVGAVFL 122 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ LI Y L+++ P KD KT LQEYLQG + LP Y V+ G AH Sbjct: 123 DAGFDAARALIRKLYIPILEQVDPRTLGKDAKTLLQEYLQGHKIALPQYNVIATHGAAHS 182 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRR 209 Q+F + C V L V GTG+SRR Sbjct: 183 QQFEVECTVPKLEVRVFGTGASRR 206 >UniRef50_Q3SH50 Ribonuclease 3 n=11 Tax=Proteobacteria RepID=RNC_THIDA Length = 226 Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 113/209 (54%), Positives = 142/209 (67%), Gaps = 6/209 (2%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61 N ++ RLQ+ LGYTF+ LLQQALTHRS + +NERLEFLGDS+L+ +A ALY FP Sbjct: 3 NALLDARLQQALGYTFSRSGLLQQALTHRSYGALNNERLEFLGDSVLNCSVARALYDAFP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG +SR+RA LVR TLAE+A LG+ LRLG GELKSGGFRR SILAD +E+L G Sbjct: 63 DLPEGSLSRLRANLVRQETLAEIAGALRLGDSLRLGEGELKSGGFRRPSILADALESLFG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 VFLD+ ++++ + + +I P KDPKTRLQE LQ R LPLP Y +V G Sbjct: 123 AVFLDAGFDEAQRVVRRLFDPLVAQIDPKASGKDPKTRLQEILQSRRLPLPEYRLVGTEG 182 Query: 182 EAHDQEFTIHCQVSGLSEPVV---GTGSS 207 EAHDQ F + C L++PV+ GTG S Sbjct: 183 EAHDQSFIVECL---LAKPVLSTRGTGKS 208 >UniRef50_A5EV51 Ribonuclease III n=2 Tax=Cardiobacteriaceae RepID=A5EV51_DICNV Length = 233 Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 110/209 (52%), Positives = 145/209 (69%), Gaps = 2/209 (0%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 L+ LGY+F + ELLQ+ALTHRS S+ HNER E+LGD++L VI+ ALY R+P EGD+ Sbjct: 12 LEHALGYSFQNPELLQRALTHRSFSADHNERFEYLGDALLETVISVALYRRYPESPEGDL 71 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD 128 +R+RA +V+ ++LA +A++ +LG LRLG GELKSGG RRESILAD VEA+I V+LDSD Sbjct: 72 TRLRAAIVKSSSLAVIAKQLDLGRYLRLGSGELKSGGKRRESILADAVEAIIAAVYLDSD 131 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEF 188 E++ L + + + + KDPKTRLQEYLQ R LPLP Y +V+ +G H + F Sbjct: 132 FYRCEQITLALFAPAIAALPDVEALKDPKTRLQEYLQSRDLPLPVYELVEEKGPEHAKIF 191 Query: 189 TIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 TI + T SSR+KAEQAAAE Sbjct: 192 TISAKSERFC--TTATASSRKKAEQAAAE 218 >UniRef50_C1D7L4 Rnc n=2 Tax=Proteobacteria RepID=C1D7L4_LARHH Length = 238 Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 108/223 (48%), Positives = 140/223 (62%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61 P I+RL + +G+ F LL++ALTHRS +NER EF+GD IL+Y IA L+ FP Sbjct: 3 TPQPIDRLMQHIGHLFTSPALLKEALTHRSYGQPNNERFEFVGDGILNYTIARMLFDAFP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG +SR+RA LV TLAE+ARE LG+CL LG GE KSGG R SILAD +EA+ Sbjct: 63 ELSEGQLSRLRANLVNQATLAEIARELTLGDCLFLGDGERKSGGHDRPSILADAMEAIFA 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V LD+D E ++ Y R+ I + KD KTRLQE LQ R LPLP Y ++ G Sbjct: 123 AVCLDADFAVAENVVRRLYAARVAGIDLNRQAKDAKTRLQEMLQARRLPLPAYRILNQSG 182 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 +AH +F + C + L G GSSRR AEQ AAE+A++ +E Sbjct: 183 DAHLSQFEVACDIPQLGLATCGEGSSRRAAEQLAAERAIEAIE 225 >UniRef50_A4VIX5 Ribonuclease III n=2 Tax=Proteobacteria RepID=A4VIX5_PSEU5 Length = 208 Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 104/188 (55%), Positives = 137/188 (72%) Query: 26 ALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELA 85 ALTHRS + ++NERLEFLGD+IL++V AL++ FP+ EG +SR+RA LV+G TLA LA Sbjct: 4 ALTHRSYAGRNNERLEFLGDAILNFVAGEALFNHFPQAREGQLSRLRARLVKGETLAVLA 63 Query: 86 REFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLD 145 R FELG+ LRLG GELKSGG+RRESILADT+EALIG ++LD+ + + ++ W L Sbjct: 64 RGFELGDHLRLGSGELKSGGYRRESILADTLEALIGAIYLDAGMDVARERVIAWLANELQ 123 Query: 146 EISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTG 205 ++ D KDPKTRLQE+LQ R LP Y VV ++GE H + F + CQV+ L++ G G Sbjct: 124 GLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQGEPHCRTFFVECQVALLNDKTHGQG 183 Query: 206 SSRRKAEQ 213 +SRR AEQ Sbjct: 184 ASRRIAEQ 191 >UniRef50_A1AWQ6 Ribonuclease III n=3 Tax=Gammaproteobacteria RepID=A1AWQ6_RUTMC Length = 221 Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 106/219 (48%), Positives = 143/219 (65%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 + +LQ+K+ Y F LL+ ALTH S +NERLEFLGDSIL +I+ LY RFP +DE Sbjct: 1 MKKLQKKINYQFKDLSLLKLALTHCSMGKNNNERLEFLGDSILGVIISKELYQRFPNIDE 60 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G +SR+R+ LVR TL +L+ EL L LG GELKSGG+RRESI AD +EA+ G V L Sbjct: 61 GKLSRLRSHLVRDQTLTQLSAGLELSNSLILGFGELKSGGYRRESIQADAIEAIFGAVLL 120 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 DS+ +T ++L+ ++ L+ ISP D KDPKT+LQEYLQ LP Y + G+ H+ Sbjct: 121 DSNFETTSTVVLDLFEMLLNNISPDDSLKDPKTQLQEYLQKYGNVLPKYELTDTIGKDHN 180 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 FTI+C + + V + S +KAEQ+ A+ LKKL+ Sbjct: 181 AIFTINCLLKDQNLQVSQSAKSIKKAEQSCAQTLLKKLK 219 >UniRef50_UPI0000E87AF2 ribonuclease III n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87AF2 Length = 243 Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 99/220 (45%), Positives = 147/220 (66%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 MN I +++ LG+TF + L++ ALTHRSA ++NERLEFLGD IL++++A LY RF Sbjct: 15 MNSNQIEQIESILGHTFKDKALIKIALTHRSAKGENNERLEFLGDGILNFIVAELLYVRF 74 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 ++ EGD+SR+R+ LV+ +TL ++A+ +G+ L LG GELKS G+RR SILAD++EA+I Sbjct: 75 QQLSEGDLSRLRSQLVKESTLCDIAKNLTIGDFLLLGEGELKSAGWRRPSILADSLEAII 134 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD I V+ I + + I P KD K+ LQE+LQG+ + +P Y V+++ Sbjct: 135 AAIYLDDGIGKVKSFIERRFNEHIITIDPNKIHKDDKSLLQEFLQGKKIAIPEYTVIEIE 194 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 GE H Q F + C++ L+ +G G SR+ AEQ AA AL Sbjct: 195 GEPHAQVFEVKCRIPKLNIEKIGKGPSRKIAEQNAANLAL 234 >UniRef50_Q4FUV6 Ribonuclease 3 n=11 Tax=Gammaproteobacteria RepID=RNC_PSYA2 Length = 265 Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 106/218 (48%), Positives = 142/218 (65%), Gaps = 3/218 (1%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGD 67 L RKLGY FN L + ALTHRS SK N ERLEFLGD++L ++ ALYHR+P +EG Sbjct: 37 LTRKLGYVFNDLSLAKLALTHRSFDSKKNYERLEFLGDALLGMIVGEALYHRYPTQNEGR 96 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS 127 ++RMRATLVR +L +A+ EL L LG GE K GG R SILAD VE+LIG ++LDS Sbjct: 97 LTRMRATLVRQESLVIIAQNLELSNQLILGVGERKGGGRNRASILADAVESLIGAIYLDS 156 Query: 128 -DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 D+ + +L+WY +D ++ KD K+RLQE+LQ + LP Y +++ RG A Q Sbjct: 157 QDMNITRECVLSWYGDLIDNVNDQKALKDAKSRLQEWLQSKQFDLPHYELMETRGNAPHQ 216 Query: 187 EFTIHCQVSGLSEP-VVGTGSSRRKAEQAAAEQALKKL 223 F + CQV+ ++ P + +G SRR AEQ AAE + +L Sbjct: 217 LFVVRCQVNIINCPDITESGESRRIAEQKAAELMINQL 254 >UniRef50_Q0AF70 Ribonuclease 3 n=4 Tax=Proteobacteria RepID=RNC_NITEC Length = 245 Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 140/213 (65%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 +KLGYTF +LLQ+ALTHRS +NERLEFLGDS+L+ ++ L+ RF + EGD+ Sbjct: 27 FSQKLGYTFKQPDLLQEALTHRSLGFPNNERLEFLGDSVLNCAVSTLLFKRFLLLPEGDL 86 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD 128 +R+RA V + L +LA +GE + LG GE KSGG +R SILA+ +EA+IG ++L+S Sbjct: 87 TRLRANFVNQDALHQLASALGIGELILLGDGERKSGGHQRPSILANAMEAIIGAIYLESG 146 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEF 188 + V+++I+ Y L+++ P KDPKT LQEYLQ R + LP Y + RG+AH Q F Sbjct: 147 FEKVDQVIVALYDPLLNQLDPDLFGKDPKTLLQEYLQSRKVDLPEYSTLLTRGDAHAQVF 206 Query: 189 TIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 + C + + G G+SRR+AEQ AA +A K Sbjct: 207 HVECVIPEFAIRTSGEGTSRRRAEQEAARRAYK 239 >UniRef50_B4RJT7 Ribonuclease 3 n=30 Tax=Neisseriaceae RepID=RNC_NEIG2 Length = 239 Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 95/200 (47%), Positives = 128/200 (64%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 +Q+KLGY F LL++ALTHRS +KHNER EF+GDSIL+Y +A L+ FP++ EG++ Sbjct: 14 IQKKLGYAFRDMSLLRRALTHRSHHAKHNERFEFVGDSILNYTVARMLFDAFPKLTEGEL 73 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD 128 SR+RA+LV LAE+A E +G+ L LG GELKSGGFRR SILAD +EA+ V D+D Sbjct: 74 SRLRASLVNEGVLAEMAAEMNVGDGLYLGAGELKSGGFRRPSILADAMEAMFAAVSFDAD 133 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEF 188 T EK++ + + R+ ++ KD KT LQE LQ R LP Y + + G A+D F Sbjct: 134 FNTAEKVVRHLFAERVRRADFQNQAKDGKTALQEALQARRFALPKYRIEEQIGHANDSMF 193 Query: 189 TIHCQVSGLSEPVVGTGSSR 208 I C + L G+SR Sbjct: 194 VISCDLGELGFVCRAKGTSR 213 >UniRef50_C5CSF5 Ribonuclease 3 n=6 Tax=Burkholderiales RepID=RNC_VARPS Length = 228 Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 140/224 (62%), Gaps = 10/224 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 + LQ +L ++F+ LLQ ALTHRS S+ HNERLEFLGDS+L+ +++ LY R + E Sbjct: 5 LTALQERLKHSFSDTRLLQLALTHRSFSADHNERLEFLGDSVLNLAVSHLLYTRLSALPE 64 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 GD+SR+RA LV+ +TL LA E +L LRLG GE +SGG R SILAD +EALIG V+L Sbjct: 65 GDLSRVRANLVKQDTLHRLALELQLSPLLRLGEGEARSGGPNRPSILADALEALIGAVYL 124 Query: 126 DSDIQTVEKLILNWYQT-----RLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 D+ E L+ Y++ R+D ++ KDPKT LQE+LQG + LP Y V Sbjct: 125 DAGFSAAEALVRRLYESVEINPRMDAVA-----KDPKTELQEWLQGHKMKLPVYRVAATL 179 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G AH Q F + C+V L G G SRR EQAAA L +L+ Sbjct: 180 GAAHKQTFDVECEVPELGLRERGIGGSRRAGEQAAAAAMLIRLK 223 >UniRef50_A7NAR0 Ribonuclease 3 n=18 Tax=Francisella RepID=RNC_FRATF Length = 230 Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 100/218 (45%), Positives = 139/218 (63%), Gaps = 3/218 (1%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 +R LGY F LL +ALTHRS + K+ ERLEFLGDS+LS+VIA LY +F + EG Sbjct: 6 SRFYNILGYNFKDYTLLIRALTHRSKTKKNYERLEFLGDSVLSFVIAEVLYKQFTDLAEG 65 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 +S++R+ LV+G TLA+LA ++ E + LG E GG +RE IL D EA+IG ++LD Sbjct: 66 KLSQLRSKLVKGTTLAQLASSLKMDEYIILGASE--QGGNKREKILEDVFEAVIGAIYLD 123 Query: 127 SDIQTVEKLILNWYQTRLDEISPGD-KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 SD TV+K+IL WYQ + I+ K KD K++LQE L L LP Y + + G+ H+ Sbjct: 124 SDFATVKKVILKWYQPIISSINLDTIKVKDSKSKLQEILLQNALSLPEYSIETIDGKDHE 183 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 Q+FT+ L+ V G+SR+KAEQ AE+ ++ L Sbjct: 184 QQFTVVAVSKDLNLRVKAQGTSRKKAEQKTAEKMIEML 221 >UniRef50_C8PUU2 Ribonuclease III n=4 Tax=Gammaproteobacteria RepID=C8PUU2_9GAMM Length = 275 Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 101/226 (44%), Positives = 140/226 (61%), Gaps = 14/226 (6%) Query: 12 KLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 ++GY F++ L AL HRS S+HN ERLEFLGD++L +IA AL+ R+P +EG +SR Sbjct: 42 QMGYQFDNVNLPIMALMHRSFDSEHNYERLEFLGDALLGVIIAEALFLRYPDYNEGRLSR 101 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS-DI 129 +RA+LVR TL +A++ L + L LG GE K GG +R SILAD+VEALIG ++LDS + Sbjct: 102 LRASLVREETLVIIAKQLNLSDYLILGVGERKGGGRQRASILADSVEALIGAIYLDSQNF 161 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 TV+ +L W++ +++ KD K+RLQE LQ L LP Y V + G A +Q F Sbjct: 162 DTVKACVLAWFEDLFEKVKEQKVLKDAKSRLQELLQAHQLALPRYEVTETIGNAPNQIFV 221 Query: 190 IHCQVSGL-----SEPVVGT-------GSSRRKAEQAAAEQALKKL 223 + CQV + ++P+ T G SRR AEQ AE L K+ Sbjct: 222 VSCQVEIIFDNKTAKPIAPTQALVTAQGESRRIAEQRCAEAMLAKI 267 >UniRef50_A0L633 Ribonuclease 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=RNC_MAGSM Length = 246 Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 101/236 (42%), Positives = 144/236 (61%), Gaps = 20/236 (8%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSA-----------SSKHNERLEFLGDSILSYV 51 P + RL++ L Y F +LLQ ALTHRSA ++ HNERLEFLGDS+L+ + Sbjct: 7 PSGLERLEQALDYRFTQSDLLQLALTHRSAPLDGSKAGEVVATTHNERLEFLGDSVLNLI 66 Query: 52 IANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESI 111 +++ LY RF V EG +S+ RA LV +L+E+A++ ELG LR+G GE KSGG + SI Sbjct: 67 VSHRLYKRFGEVPEGQLSQWRAMLVNTRSLSEVAKDLELGRYLRMGRGEAKSGGREKYSI 126 Query: 112 LADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL 171 L + +EAL+G ++LD + E+++ + ++ I P + KD KT LQEYLQ R L Sbjct: 127 LGNALEALLGAIYLDGGFEAAERVVDRLFAHQVAGIEPEQQGKDYKTLLQEYLQARGEAL 186 Query: 172 PTYLVVQVRGEAHDQEFTIHC----QVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 P Y V+ G H++ F + C Q+ G G G S+R+AEQ AA+QAL+ L Sbjct: 187 PIYAVLSAEGPPHERVFVVSCHPREQLCG-----HGQGRSKREAEQHAAQQALELL 237 >UniRef50_B3T0T1 Putative RNase3 domain protein n=2 Tax=prokaryotic environmental samples RepID=B3T0T1_9ZZZZ Length = 224 Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 1/215 (0%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 +++ Y F LLQ ALTHRS S +NERLEFLGD+ L VI+ LY + EG +S Sbjct: 9 EQRFHYRFKDDILLQTALTHRSHSVDNNERLEFLGDAALDLVISELLYQSYSEQTEGYLS 68 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 RMR++LV+GNTLAELA+E ++G L LG GE SGG R S+L+DT+EA+IG +FLD Sbjct: 69 RMRSSLVKGNTLAELAKELDVGGYLILGKGENTSGGRERLSLLSDTLEAMIGAIFLDGGY 128 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 V+ +I+ + +R+ + P + KD K+ LQE LQG LP Y +V+ G+ H++ F Sbjct: 129 VAVKNVIIKIFDSRIQALDPKSEHKDHKSVLQEKLQGVKQGLPVYSLVRSVGD-HNKTFV 187 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + C + +G + R AEQ AA +AL+ ++ Sbjct: 188 VECSIKSGEIVTQASGKTLRVAEQKAASKALQAMQ 222 >UniRef50_B9ZJG8 Ribonuclease III n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJG8_9GAMM Length = 236 Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/185 (50%), Positives = 118/185 (63%) Query: 23 LQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLA 82 ++QALTHRSA ++NERLEFLGD++L VIA+ALY + P EGD++R+RA LV +LA Sbjct: 29 VRQALTHRSAGGRNNERLEFLGDAVLGLVIADALYEQLPDAPEGDLTRLRAALVNRESLA 88 Query: 83 ELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQT 142 LARE L L LG GE KSGG RR+SILAD VEALIG + ++ +Q L Y Sbjct: 89 ALARESGLEGTLNLGQGERKSGGQRRDSILADAVEALIGVTYREAGMQAARDFTLALYAE 148 Query: 143 RLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVV 202 RL + + KDPKTRLQE LQGR+ LP Y V++V G H + FT+ + Sbjct: 149 RLGNLPSAESLKDPKTRLQEQLQGRNAELPVYEVLEVVGPDHQRRFTVSVHLPTQGWGQQ 208 Query: 203 GTGSS 207 G GSS Sbjct: 209 GEGSS 213 >UniRef50_A6GP51 Ribonuclease III n=1 Tax=Limnobacter sp. MED105 RepID=A6GP51_9BURK Length = 226 Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 127/211 (60%) Query: 13 LGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMR 72 + Y+F Q LL+ ALTHRS SS HNERLEFLGDS+L+ + L+ P +DEG MSR+R Sbjct: 1 MAYSFKDQALLRLALTHRSYSSHHNERLEFLGDSVLNCAASILLFETHPDMDEGKMSRVR 60 Query: 73 ATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 + LV+ + LA + R L + L LG GEL+S ++SI+AD +EAL G + LDS + Sbjct: 61 SHLVKQDCLAMVGRNLLLDQYLFLGAGELRSAKTIKDSIVADALEALFGAILLDSGFEAA 120 Query: 133 EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHC 192 ++ + + E KDPKTRLQE LQG+ + LP Y V+ G + EF++ C Sbjct: 121 RDCVVRLLKPVMLETPIESMGKDPKTRLQELLQGKRMKLPMYRVLVEGGTSASPEFSVEC 180 Query: 193 QVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 V L VG G SRR AEQ AA+ L +L Sbjct: 181 AVEDLEITKVGQGHSRRVAEQHAAQAVLIEL 211 >UniRef50_B1LTR3 Ribonuclease III n=11 Tax=Alphaproteobacteria RepID=B1LTR3_METRJ Length = 259 Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 134/220 (60%), Gaps = 6/220 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN---ERLEFLGDSILSYVIANALYHRFPR 62 + L+ ++G++F Q+LL +ALTH S +S +RLEFLGD +L +A+ LY FP Sbjct: 28 LTALEERIGHSFGDQDLLTRALTHTSKASGRGGSYQRLEFLGDRVLGLAVADRLYGAFPE 87 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 DEGD+SR A LVR T A +A +E+G L LG GE+ GG R ++ILAD EA++G Sbjct: 88 ADEGDLSRRLAALVRRETCAAVAASWEVGPHLILGQGEVMGGGRRNQTILADVCEAILGA 147 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 ++LD+ ++ + R E + + +D K+ LQE+ GR LP+PTY VV+ G Sbjct: 148 IYLDAGFDAARAVVETHF--RPGEPTAAARGRDAKSALQEWAMGRSLPIPTYAVVERTGP 205 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 H F I QV GL EP +G G+S+R AEQAAA +++ Sbjct: 206 DHAPRFRIAVQVEGL-EPGLGDGTSKRIAEQAAARALMER 244 >UniRef50_A4J683 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_DESRM Length = 246 Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 140/228 (61%), Gaps = 14/228 (6%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHR 59 NRL+ +LG+ +++ LL QALTH S + HN+RLEFLGD++L +I+ LY Sbjct: 9 NRLKTRLGFKWHNPTLLIQALTHSSCVHENRGHGLCHNQRLEFLGDAVLELIISEHLYKM 68 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EG++++MRA+ V +LA++AR +LG CLR+G GE +SGG R SILAD EAL Sbjct: 69 FPDRTEGELTKMRASSVCEPSLAKVARGLDLGRCLRMGRGEERSGGRERPSILADAFEAL 128 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLP-TYLVVQ 178 +G ++LD ++ +LN + +D++ G +D KT LQE LQ + P P TY ++ Sbjct: 129 LGAIYLDQGLEISRHFVLNCLSSIIDDVVAGRLDRDYKTELQEILQ-QSSPDPLTYTIMD 187 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGS--SRRKAEQAAAEQALKKLE 224 G HD+ FT G V+G GS S+++AEQ AA+ A + LE Sbjct: 188 ESGPDHDKTFTAGVIYKG---KVIGKGSGHSKKEAEQQAAKDAFQHLE 232 >UniRef50_B8CWW9 Ribonuclease III n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWW9_HALOH Length = 236 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 89/214 (41%), Positives = 135/214 (63%), Gaps = 8/214 (3%) Query: 17 FNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 FN LLQ+A+TH+S + NERLEFLGDS+LS VI+ LY FP +EG+++ Sbjct: 21 FNDISLLQKAVTHKSFVHEKSDPDLEDNERLEFLGDSVLSIVISTYLYKNFPEYNEGELA 80 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 +MRA +V + LA ARE LG+ + +G GE +GG RESILADT+EA+IG ++LD Sbjct: 81 KMRAYIVSSSHLACKARELGLGKYILMGKGEELNGGRERESILADTLEAVIGAIYLDQGF 140 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 T+ L++N+++ + ++ G+ +D KT LQE++Q Y ++ G H+++F Sbjct: 141 NTITDLLINFFKDDVKKLDQGNIIRDYKTYLQEFIQKDGSCEIKYNIINEYGPDHNKKFE 200 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + +V+G E GTG S+++AEQ AA+ AL L Sbjct: 201 VGVKVNG-KELGRGTGFSKKEAEQKAAKDALSNL 233 >UniRef50_Q8R9W3 Ribonuclease 3 n=37 Tax=Bacteria RepID=RNC_THETN Length = 228 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/225 (40%), Positives = 140/225 (62%), Gaps = 7/225 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 ++ L++K+ Y F + LL +ALTH S + + NERLEFLGDS+LS VI+ LY Sbjct: 1 MLTYLEQKINYEFKDKTLLLEALTHSSWAHEGKNEKVSNERLEFLGDSVLSLVISEYLYK 60 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++EG +S+ RA +V +LA AR+ ELG LR+G GE SGG R+SILAD +EA Sbjct: 61 NRKDLEEGSLSKYRAEIVCEPSLARCARKIELGSFLRMGKGEEISGGRDRDSILADAMEA 120 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+ V+LD ++ V ++IL+ ++ +DE+ G +D KTRLQE +Q + TY +V+ Sbjct: 121 LLAAVYLDGGLEAVRRVILDLFKEIIDEVLKGIIYRDYKTRLQEVVQSMEVGKITYELVE 180 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H++ F ++ + +G G S++++EQAAA +AL KL Sbjct: 181 EIGPDHNKTFVTQVKIGDVVLG-IGQGKSKKESEQAAAMEALSKL 224 >UniRef50_B2KC89 Ribonuclease III n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC89_ELUMP Length = 221 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/225 (40%), Positives = 144/225 (64%), Gaps = 14/225 (6%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSA-----SSKHNERLEFLGDSILSYVIANALYHRFP 61 N +++ L Y+F ++EL+++ALTH+S S KHNERLEFLGDS+L V A +Y ++P Sbjct: 3 NDIEQVLDYSFKNKELIREALTHKSFTGERRSVKHNERLEFLGDSVLGLVAAEYIYSKYP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 V+EG +S++++ LV + L A E +LG L LG GE +GG RESIL++ +EA++G Sbjct: 63 EVEEGVLSKIKSGLVSRHNLYLWASELDLGAYLALGAGEAATGGRTRESILSNAMEAVLG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 V+LD ++V+ +I W T+ L E+S D K+ LQE +Q ++ +P Y V+Q Sbjct: 123 AVYLDGGFESVKNIINKWISTQSLTEVSS-----DYKSTLQEIVQKKYKSVPEYEVIQTV 177 Query: 181 GEAHDQEFTIHCQVSGLSEPV-VGTGSSRRKAEQAAAEQALKKLE 224 G H++ FT+ VS L + + G G +++ AEQ AA+ AL+ L+ Sbjct: 178 GPEHEKIFTV--VVSSLKKELGRGRGKNKKLAEQDAAKNALENLK 220 >UniRef50_Q0F3I4 Ribonuclease III n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3I4_9PROT Length = 229 Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 134/224 (59%), Gaps = 11/224 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTH----RSASSKHNERLEFLGDSILSYVIANALYHRFP 61 + +LQ+ +GY FN+ LL++ALTH RSA S ERLEFLGD++L V+A L+ FP Sbjct: 8 LQQLQQVIGYRFNNPALLKRALTHCSALRSAVSGDLERLEFLGDAVLGLVVAEYLHQSFP 67 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG +SRMRA LV ++L +A ++ L CL +G GE G + SI+A+ VEA+IG Sbjct: 68 EEPEGQLSRMRANLVCRDSLLVVASDWRLSACLIVGDGERGEYGIKSPSIVANAVEAVIG 127 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 VF +S +++L ++ LD+I D +D K+RLQE QG+ LP Y++V RG Sbjct: 128 AVFEESGWDASRRVVLTAWRPMLDDIGRVDP-RDAKSRLQELTQGKGWGLPEYVLVD-RG 185 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRK--AEQAAAEQALKKL 223 + F C V E VVG GS RK AE AAAEQA KL Sbjct: 186 VGYQPRFEATCSV---QEKVVGHGSGERKKLAEIAAAEQAWSKL 226 >UniRef50_B1C8X8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8X8_9FIRM Length = 227 Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 85/225 (37%), Positives = 138/225 (61%), Gaps = 6/225 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS-----KHNERLEFLGDSILSYVIANALYHRF 60 I RL++KLGY F +EL++ ALTH S S+ ++NERLEFLGD++L + LY Sbjct: 3 IERLEQKLGYEFKDKELIKVALTHSSKSNENKTLQNNERLEFLGDAVLDLCVGAYLYKTL 62 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++++RA +V ++L + + +LGE + LG GE+ SGG +++I+AD EA++ Sbjct: 63 PGKKEGVLTKLRALIVCADSLFSASDKLDLGEFIMLGKGEMHSGGKYKKNIIADCFEAVL 122 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LDSD + V + L + + G+ D KT LQEY+ +++ +Y +VQ++ Sbjct: 123 GAIYLDSDYEKVSTIALTLLSDVIKKAISGNLTYDYKTLLQEYIHSKNIKDFSYELVQIK 182 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 G HDQ FT ++ + G G +++++EQ AA LKKL+L Sbjct: 183 GPEHDQIFTSKVIINN-KDMGQGEGKNKKESEQHAALNTLKKLKL 226 >UniRef50_B4RCU4 Ribonuclease 3 n=6 Tax=Caulobacteraceae RepID=RNC_PHEZH Length = 238 Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/228 (40%), Positives = 130/228 (57%), Gaps = 13/228 (5%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSA-----SSKHNERLEFLGDSILSYVIANALYHR 59 + L+R++GY F ++LL++ALTH S + +HNERLEFLGD +L+ A L Sbjct: 7 AVAELERRIGYVFTDRDLLERALTHASVGDGARAVRHNERLEFLGDRVLNLCAAERLMAL 66 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 P EG+MSR+ A+LV + A A+ L E LRL K G + +++L D EAL Sbjct: 67 DPDAREGEMSRLLASLVNYHACARAAKRAGLQEALRLSASATKVGARKSDAVLGDACEAL 126 Query: 120 IGGVFLDSDIQTVEKLILNWYQ---TRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 I +++D ++T L ++ RLDE + KDPKT+LQE++QG LPLPTY + Sbjct: 127 IAALYIDGGLETARAFFLKFWDEEFARLDE----PRAKDPKTQLQEWVQGMGLPLPTYEI 182 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 V G H FT+ QV+G G G SR+ AE+AAA+ L K E Sbjct: 183 VSQEGPPHAPSFTVEVQVAGFGAE-RGEGRSRQAAEKAAAQCMLLKRE 229 >UniRef50_A8TKF3 SsrA-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKF3_9PROT Length = 227 Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 90/223 (40%), Positives = 132/223 (59%), Gaps = 10/223 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH---NERLEFLGDSILSYVIANALYHRFPR 62 ++ L LG+TFNH ++L++A+TH SA + ERLEFLGD +L+ +A L RFP Sbjct: 8 LSHLAEVLGHTFNHPDILRRAVTHASAEPRAWNAYERLEFLGDRVLALAVAEQLLDRFPH 67 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG +++ +LVR TLA++A +LG L + GE +G ++IL+D++EA+I Sbjct: 68 EREGAIAKRHVSLVRRETLADVAHTIDLGRYLIVSRGEDDAGARASDTILSDSMEAVIAA 127 Query: 123 VFLDSDIQTVEKLILNWYQT--RLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD + +K IL + +D P +DPKT LQE+ QGR LPLP Y V+ Sbjct: 128 LYLDGGLAAAQKFILKHWNPLLEMDHRPP----QDPKTGLQEWAQGRRLPLPVYTTVEQT 183 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G AH EFT+ V GL+ P +G S+R AEQ AA L+ + Sbjct: 184 GPAHAPEFTVEVVVEGLA-PQRASGKSKRLAEQLAAAAMLEAI 225 >UniRef50_Q39T82 Ribonuclease 3 n=5 Tax=Geobacter RepID=RNC_GEOMG Length = 246 Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 93/228 (40%), Positives = 134/228 (58%), Gaps = 13/228 (5%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASS--------KHNERLEFLGDSILSYVIANALYHRF 60 L+ +GY F +++ L +ALTHRS + + NERLEFLGD++L ++ L+ RF Sbjct: 19 LEAGIGYRFVNRQFLAEALTHRSWVNERRGEEGIRDNERLEFLGDAVLGLLVGKMLFARF 78 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P+ EG ++RM+A+LV TLA LA LG L LG GE +SGG R S+LA+T EAL+ Sbjct: 79 PQSREGVLARMKASLVGEETLAALASARGLGRHLLLGRGEERSGGRERRSLLANTYEALL 138 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 V+LD + VE+++ + L I+ G +D KT QE +Q R PTY ++ Sbjct: 139 AAVYLDGGLGPVERIVEQDFSPLLAGIASGATGRDFKTEFQEMVQTRFGTAPTYELIATD 198 Query: 181 GEAHDQEFTIHCQVSG--LSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD+ FT+ V+G + E G G S+++AEQAAA Q L + E Sbjct: 199 GPPHDRRFTVIAMVAGKRMGE---GAGRSKKEAEQAAARQVLARFAAE 243 >UniRef50_B2A2N1 Ribonuclease 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RNC_NATTJ Length = 230 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 95/228 (41%), Positives = 142/228 (62%), Gaps = 17/228 (7%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59 I L+ KLG + +LL QA+TH S + + HNERLEFLGD++L I+ LY + Sbjct: 8 IVELKEKLG-IYVDDKLLLQAVTHTSYAHEQKDVVDHNERLEFLGDAVLELAISETLYKK 66 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P + EG+++++RA LV +L ++A + +LG+ LRLG GE +GG R S LADTVEAL Sbjct: 67 YPELPEGELTKLRAELVCELSLVKIAEKLDLGKYLRLGKGEDSTGGRDRRSTLADTVEAL 126 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQK--DPKTRLQEYLQGRHLPLPTYLVV 177 IG V+L ++ ++LIL+ ++ D++S D Q+ D KT +QE +Q R+ P Y +V Sbjct: 127 IGAVYLQTNYDQTKQLILDLFK---DQLSHIDNQRIGDYKTMIQELVQDRYGDPPKYQIV 183 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGS--SRRKAEQAAAEQALKKL 223 + G HD+ F Q++ VVG GS S+++AEQ AA A +KL Sbjct: 184 KESGPDHDKSFVAEVQINN---EVVGRGSGKSKKEAEQNAAHFAFQKL 228 >UniRef50_Q5LZ68 Ribonuclease 3 n=100 Tax=cellular organisms RepID=RNC_STRT1 Length = 237 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/231 (41%), Positives = 137/231 (59%), Gaps = 17/231 (7%) Query: 6 INRLQRKL----GYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIAN 54 +N+L++KL G F+ ++LL+ A TH S +++H NERLEFLGD+ L VI+ Sbjct: 9 MNQLEQKLEQDFGIVFSQKDLLETAFTHTSYANEHRLLNISHNERLEFLGDAALQLVISV 68 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY+R+P EG+MS+MR+T+VR +LA + + +RLG GE KSGG R +IL D Sbjct: 69 YLYNRYPNKPEGEMSKMRSTIVREESLAGFTKACGFEQYIRLGKGEEKSGGRERATILGD 128 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPG--DKQKDPKTRLQEYLQGRHLPLP 172 EA +G ++LD + VEK + Q + ++ G D+ D KT LQE LQ Sbjct: 129 LWEAFLGALYLDQGLPAVEKFL---NQVMIPQVEKGNFDRVIDYKTALQERLQVNGKVDI 185 Query: 173 TYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 TY V+ G AH +EFT+ V G E G G S++ AEQAAA+ AL++L Sbjct: 186 TYTVIDESGPAHAKEFTMQVAVDG-KELSTGLGKSKKLAEQAAAKSALEQL 235 >UniRef50_C7NB47 Ribonuclease III n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NB47_LEPBD Length = 232 Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 141/223 (63%), Gaps = 8/223 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFP 61 L +K+GY F +++ L++ALTHRS S++ +NE+LEFLGD+IL+ + +Y + Sbjct: 10 LIKKIGYEFKNKKYLEEALTHRSYSNEAEKTRRFNNEKLEFLGDAILNLITTEYIYDLYG 69 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG+++++++ ++ + +A + +LGE L L GE+ SGG R SIL D EALIG Sbjct: 70 KKTEGELAKLKSQIISEPVFSTIASDIKLGEYLYLSNGEIMSGGRNRRSILGDAFEALIG 129 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +F DSD T + + L + +++++ + D KT LQE++QG++ +P Y +++ +G Sbjct: 130 AIFKDSDYYTAKNVALKFLLGKINKLEEIEGTGDYKTILQEFVQGKYKKMPEYKLLRTKG 189 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 H++ F I C +GTG S+++AE+ AA++AL+KL+ Sbjct: 190 PDHNKVFEI-CVRWNDKIYGIGTGKSKKEAEKHAAKEALEKLK 231 >UniRef50_A0NMB9 Ribonuclease III n=2 Tax=Rhodobacteraceae RepID=A0NMB9_9RHOB Length = 236 Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 88/227 (38%), Positives = 129/227 (56%), Gaps = 9/227 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIANA 55 P I+ L+ L Y F ELL+ ALTH SA + +RLEFLGD +L VIA+ Sbjct: 7 QPGPISALKNALQYEFRDLELLRVALTHASALPPSETVAGSYQRLEFLGDRVLGLVIASM 66 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ FPR DEG+++R +V+ T AE+A+E +G+ +R+G E ++GG ++ ++LAD Sbjct: 67 LHKHFPRADEGELARRFNHMVKRETCAEIAQELGVGDAMRIGLAEAQTGGRKKTALLADI 126 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 E++I ++LD + E I ++ R+ +S +D KT LQE+ Q + LP P Y Sbjct: 127 CESVIAAIYLDGGFEAAESFITRLWEPRM--LSWSGPLRDAKTTLQEWAQSKSLPTPRYD 184 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 V G H FT+ V GL P G G S+R AEQ AAE L++ Sbjct: 185 VTSRDGPDHAPNFTVSVTVQGLP-PGEGKGGSKRIAEQNAAEAVLRR 230 >UniRef50_C8W586 Ribonuclease III n=2 Tax=Clostridia RepID=C8W586_DESAS Length = 259 Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 86/227 (37%), Positives = 138/227 (60%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYH 58 I +L +++G +N + LL QALTH S A+ +N+RLEFLGD++L +++ LY Sbjct: 8 IMQLMQQVGVAWNDENLLWQALTHSSYVYESGSAAHTNNQRLEFLGDAVLELLVSGYLYS 67 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +P EG+++++RA +V +LA++AR+ LG CLR+G GE +SGG R SILAD+ EA Sbjct: 68 SYPECAEGELTKLRAAIVCEPSLAKVARQLNLGYCLRMGKGEERSGGRERPSILADSFEA 127 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+G V+LD ++ L + ++++ G +D KT LQE LQ + +Y+++ Sbjct: 128 LLGAVYLDQGLEKTRMFALKFLAPVINDVLEGRVDRDYKTELQEMLQKKSPEPISYVILN 187 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVV--GTGSSRRKAEQAAAEQALKKL 223 G H + FT G+ ++ GTG S+++AEQ AA+ AL +L Sbjct: 188 EEGPDHQKLFTAGVVYCGI---IIGQGTGRSKKEAEQQAAKIALLEL 231 >UniRef50_A1WMW1 Ribonuclease 3 n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=RNC_VEREI Length = 247 Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 94/235 (40%), Positives = 129/235 (54%), Gaps = 25/235 (10%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 M P +I LQ +L + F+ LL++A THRS S++HNERLEFLGDS+L+ +++ LY R Sbjct: 1 MRPDLIA-LQERLQHVFSDPGLLERATTHRSFSAEHNERLEFLGDSVLNLAVSSLLYQRL 59 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLG--------------------PGE 100 + EG++SR+RA LVR +L +LA L + LRLG P E Sbjct: 60 SALPEGELSRVRANLVRQESLYQLALRLPLAQALRLGESLSGNRQRRSRRRCADELQPDE 119 Query: 101 LKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISP--GDKQKDPKT 158 SGG + SILAD +EALIG V+LD+ + + L+ +Q EISP +D KT Sbjct: 120 AGSGGLQHPSILADALEALIGAVYLDAGYASAQALVQRLFQDV--EISPRMQAAARDAKT 177 Query: 159 RLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 LQE+L R + P Y VV G AH F + C + L G+ SR+ EQ Sbjct: 178 ALQEWLASRKMKPPQYQVVARVGAAHCPTFEVACGIPALGLTERGSAGSRQAGEQ 232 >UniRef50_C0QYN3 Ribonuclease III n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QYN3_BRAHW Length = 243 Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 138/227 (60%), Gaps = 8/227 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASS------KHNERLEFLGDSILSYVIANALYH 58 ++N Q L Y F +++ L +A+THR+ ++ K+N+RLEFLGDS+LS +I++ L+ Sbjct: 6 ILNNCQTALKYEFRNKDHLLEAITHRTYANESKKKMKYNQRLEFLGDSVLSLIISDYLFK 65 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++ EG +S+++++LV +LA++++E +LG+ L LG GE SGG R+++L D EA Sbjct: 66 KYSSSKEGLLSKVKSSLVSQKSLADISKELKLGDFLLLGHGEEASGGRYRDNMLEDLFEA 125 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G ++LDS I + K ++ Y+ RL + + KD KT QE +Q +H P Y + Sbjct: 126 IVGAIYLDSGITSASKFVMRAYKERLKNLDIENFDKDYKTIFQELIQKKHKTSPIYKSYE 185 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 H+ F V+ +G G S+++AE AA++AL K+E+ Sbjct: 186 YYDNNHEM-FKSEVYVND-KNFALGVGKSKKEAETNAAKKALDKIEM 230 >UniRef50_Q3A4Q8 Ribonuclease 3 n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RNC_PELCD Length = 232 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/223 (37%), Positives = 135/223 (60%), Gaps = 8/223 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHN-------ERLEFLGDSILSYVIANALYHRFP 61 L+ + Y F++Q LL +ALTH+S S++ N ERLEFLGD++L V+++ ++ FP Sbjct: 10 LEDTIDYVFDNQALLLEALTHKSFSNEQNDRTEPDNERLEFLGDAVLGVVVSHYIFRTFP 69 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG+++R+R+ +V L + + LG+ +RLG GE +SGG ++ S+LA+T+EAL+G Sbjct: 70 HLPEGELTRIRSEVVSEKGLTVIGKAICLGDYMRLGKGEERSGGRQKSSLLANTMEALLG 129 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 VF D +V ++I + + + D KTRLQE LQ R +P Y+++ G Sbjct: 130 AVFCDGGFDSVRRVIEALFIPHIQRAARRKTGVDYKTRLQERLQARFGDVPQYVLIHADG 189 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 H + +++ G S G G S++ AEQAAA+QAL+ LE Sbjct: 190 PPHQRSYSVEAHFRG-SCIGQGQGRSKKSAEQAAAKQALEYLE 231 >UniRef50_B7JZ63 Ribonuclease III n=3 Tax=Cyanobacteria RepID=B7JZ63_CYAP8 Length = 225 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/222 (38%), Positives = 133/222 (59%), Gaps = 17/222 (7%) Query: 17 FNHQELLQQALTHRS------ASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 F +QELL ALTHRS ++HNERLEFLGD+IL +V++ LY R+P + E ++R Sbjct: 7 FKNQELLDCALTHRSYINEHFEVTEHNERLEFLGDAILQFVVSEELYRRYPELTEAQLTR 66 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 +R+ LV LA+ AR +LG+ + LG G +K GG ++L+D EA+IG FLD+ I+ Sbjct: 67 LRSKLVDEPQLAQFARTLDLGQLMYLGQGAIKDGGRENPALLSDAFEAIIGAYFLDAGIE 126 Query: 131 TVEKLILNWYQTRLDE-ISPGDKQKDP-----KTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 V+ + + ++ +D + P + P K RLQ++ ++ +P Y +++ G H Sbjct: 127 AVQYFVRSLFKEAIDNLVLPESRTVSPSIIDVKNRLQQWALEQYKQVPEYFLIEQSGPDH 186 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAE--QAAAEQALKKLE 224 +EF +++G V+GTG RRK E +AAA+ AL KL+ Sbjct: 187 AKEFVFGVRING---QVLGTGKGRRKQEATKAAAQDALDKLQ 225 >UniRef50_Q2W513 DsRNA-specific ribonuclease n=2 Tax=Magnetospirillum RepID=Q2W513_MAGSA Length = 228 Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 119/212 (56%), Gaps = 12/212 (5%) Query: 13 LGYTFNHQELLQQALTH-------RSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 LG+ F ELL QALTH +S +S ERLEFLGD +L V+A L+ RFP E Sbjct: 12 LGHAFARPELLAQALTHPSMHQGRKSRTSDPYERLEFLGDRVLGLVVAEMLFSRFPNEAE 71 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G ++R A LVR +A +A E LG CL L GE +GG ILAD EA+IG ++ Sbjct: 72 GALARRHAALVRREAVARIATEIGLGRCLVLAKGEDDAGGRANPGILADACEAVIGALYA 131 Query: 126 DSDIQTVEKLILNWYQTRLDE-ISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 D+ + + ++ ++E ++P KD KT LQE+ QGR PLP Y V+ G H Sbjct: 132 DAGFAVAASFVRSRWEPMMEEALAP---PKDAKTGLQEWAQGRGKPLPHYQVLGQEGPPH 188 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAA 216 + F I V G+ VG G+S+R AEQAAA Sbjct: 189 EPIFLIEVSVEGVGS-AVGRGASKRVAEQAAA 219 >UniRef50_B9XI61 Ribonuclease III n=1 Tax=bacterium Ellin514 RepID=B9XI61_9BACT Length = 231 Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/210 (43%), Positives = 116/210 (55%), Gaps = 7/210 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS------KHNERLEFLGDSILSYVIANALYHR 59 +N LQ LGY F ELLQ ALTH S + +HN+RLEFLGD++L V+ + LY + Sbjct: 4 LNNLQTALGYAFRKIELLQLALTHPSVAHEQRTPVQHNQRLEFLGDAVLQLVLTHELYSK 63 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EG +++ RA LV LAE R LG L L GE GG R S LADT EAL Sbjct: 64 FPDFGEGPLTKARAKLVNRRALAEQGRALNLGAHLILSRGEEAHGGRLRPSALADTFEAL 123 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G +FLD + VEK +L + L EIS ++PK LQE LQ + P Y VV Sbjct: 124 LGAIFLDGGFEAVEKFLLARFHDMLAEISALPALENPKGELQELLQAKSSEAPQYNVVST 183 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G HD+ F Q +G+ E G G S++ Sbjct: 184 SGPDHDRVFECIVQHNGV-ELAHGRGKSKK 212 >UniRef50_A5D1H6 Ribonuclease 3 n=3 Tax=Peptococcaceae RepID=RNC_PELTS Length = 241 Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 88/226 (38%), Positives = 138/226 (61%), Gaps = 12/226 (5%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 L+ +LG + + LL +ALTH S + ++ N+RLEFLGD++L +++ LY P Sbjct: 11 LKNRLGIAWRDEGLLTRALTHSSFTYENRQNGLENNQRLEFLGDAVLELAVSDYLYRSKP 70 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 +DEGD++++RA++V +LA +ARE ELG CL +G GE +SGG R SILAD EAL+G Sbjct: 71 EMDEGDLTKLRASVVCEPSLARVARELELGTCLYMGKGEERSGGRDRPSILADAFEALLG 130 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+LD ++ L + + + ++ G ++D KT LQE +Q R Y++++ G Sbjct: 131 AVYLDQGLEKAAGLAIKYLAPLIGDVLEGRLERDYKTELQELVQQRGGEQVQYVILKEEG 190 Query: 182 EAHDQEFTIHCQVSGLSEPVV--GTGSSRRKAEQAAAEQALKKLEL 225 H + FT G+ +V GTG S+++AEQ AA++AL K +L Sbjct: 191 PDHHKSFTAGVLYRGV---LVGQGTGRSKKEAEQQAAKKALMKSDL 233 >UniRef50_C5SLX4 Ribonuclease III n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SLX4_9CAUL Length = 242 Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 122/220 (55%), Gaps = 10/220 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSAS--------SKHNERLEFLGDSILSYVIANAL 56 V++ L+ KLGY F ++LL ALTH S S S NERLEFLGD +L ++A AL Sbjct: 15 VLDELEAKLGYRFADRQLLDSALTHASVSDGRPKKTVSSDNERLEFLGDRVLGLLVAEAL 74 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 FP+ EG+MS+ LV T A +A +G +RL PGE KSGG +IL D Sbjct: 75 MQAFPQAAEGEMSQRLHGLVSRETCAAVAMSLGVGAAMRLAPGETKSGGRSNLTILGDAC 134 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EALI V+LD +T ++ +Q + S +PK+ LQE+ + LP P Y + Sbjct: 135 EALIAAVYLDGGFETARRIFGPLWQPHI-RASHSRSHLNPKSHLQEWAAQKKLPSPKYEI 193 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAA 216 V+ G H F + + G +PVV +G SR++AE+AAA Sbjct: 194 VERSGPDHAPIFKVALTLEGY-DPVVASGKSRQEAEKAAA 232 >UniRef50_D1ALH0 Ribonuclease III n=7 Tax=Fusobacteriaceae RepID=D1ALH0_SEBTE Length = 231 Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 137/228 (60%), Gaps = 12/228 (5%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 M+ + L K+GY F+ +LL++AL HRS +++H NERLEFLGD++L + Sbjct: 1 MDDSKLRELMEKIGYEFDDIKLLKEALIHRSYANEHGEIENINNERLEFLGDAVLDLIST 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 +Y + +EGD++++++ ++ + +++E LGE L L GE +GG R+SIL Sbjct: 61 EYIYTKEKDDNEGDLAKLKSRIISEPIFSAVSKEIALGEYLFLSNGEEITGGRDRKSILG 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EALIG +F+DS +++ L + + ++D I ++ KD KT LQE Q + +P Sbjct: 121 DAFEALIGAIFMDSGFDEAKRIALKYLKDKIDNIDDLEELKDYKTLLQELFQSKFHIIPN 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVV--GTGSSRRKAEQAAAEQA 219 Y ++ +G H+++F I + L E +V GTG+S+++AE+ AA +A Sbjct: 181 YEILSEKGPDHNKKFEIAVK---LKEEIVGIGTGTSKKEAEKNAAREA 225 >UniRef50_B1H0Q0 Ribonuclease III n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0Q0_UNCTG Length = 243 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 136/226 (60%), Gaps = 15/226 (6%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPR 62 + Q+ + Y F ++L ALTH+S +++ +N R+EFLGDSILS ++A LY R+PR Sbjct: 8 KFQKIIEYKFGDPKILATALTHKSYAAETVGENYNRRMEFLGDSILSAIVAETLYLRYPR 67 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG +S+ +A ++ + L+ ARE +LG C+ LG E +RES+L D EA+IG Sbjct: 68 ESEGKLSQFKAQIISAHNLSSWAREMDLGGCIYLGKSEDTKEARQRESLLCDVFEAVIGA 127 Query: 123 VFLDSDIQTVEKLILNWYQTRLD-EISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD + +K +L + + + EI+ D K+RLQE LQ + LP Y V++ G Sbjct: 128 IYLDGGFENAKKFVLRFLNDQKEIEIT------DYKSRLQEILQSIYKELPEYKVIKESG 181 Query: 182 EAHDQEFTIHCQVSGLSEPV-VGTGSSRRKAEQAAAEQALKKLELE 226 H+++F + + SE + G G+S+++A+Q AA+QA+K + E Sbjct: 182 PDHNKKFEVAVYIK--SELLGKGAGNSKKEAQQFAAKQAMKNIRAE 225 >UniRef50_A8SMU0 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMU0_9FIRM Length = 237 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/225 (38%), Positives = 126/225 (56%), Gaps = 8/225 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIANALYH 58 ++N L LGY F ELL A HRS ++ NERLEFLGD IL ++++ LY Sbjct: 9 LLNELMEVLGYKFKDLELLNLAFVHRSYLNECKDATISNERLEFLGDVILGFIVSVELYE 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +FP DEG ++++R+ +V + + AR F LG+ L LG GE GG R SILADT EA Sbjct: 69 QFPNSDEGYLTKIRSKVVCEESFSYAARTFNLGKYLLLGKGEDSFGGRNRNSILADTFEA 128 Query: 119 LIGGVFLDSDIQTVEKLILNW-YQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 L G ++LD + V ++ + + T + +I KD K+ LQEY +Y +V Sbjct: 129 LFGALYLDGGMDVVTEIANKYFFDTVVYKIDKNIFIKDYKSYLQEYFHKNATTKISYTLV 188 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 RG HD+EF + + + + GTG ++++AEQ AA AL K Sbjct: 189 AERGPDHDKEFDMCVNIDDVVKG-YGTGKNKKQAEQQAARDALIK 232 >UniRef50_C1Q9X5 Ribonuclease III n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q9X5_9SPIR Length = 246 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 79/234 (33%), Positives = 139/234 (59%), Gaps = 11/234 (4%) Query: 1 MNPI----VINRLQRKLGYTFNHQELLQQALTHRSASS------KHNERLEFLGDSILSY 50 MN I ++N Q + Y F ++ L +A+THR+ ++ K+N+RLEFLGDS+LS Sbjct: 1 MNIINIEEILNNCQEVIKYEFRNKSYLLEAITHRTYANESKKKMKYNQRLEFLGDSVLSL 60 Query: 51 VIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRES 110 +I++ L+ ++ EG +S+++++LV +LA++++E +LG+ + LG GE SGG R++ Sbjct: 61 IISDYLFKKYNTSKEGLLSKVKSSLVSQKSLADISKELKLGDFILLGHGEEVSGGRYRDN 120 Query: 111 ILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP 170 +L D EA++G ++LDS I + ++ Y+ RL+ + + KD KT QE +Q +H Sbjct: 121 MLEDLFEAIVGAIYLDSGINNAAQFVMKAYKNRLNNLDIENFDKDYKTIFQELIQKKHKT 180 Query: 171 LPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 P Y + E + + F V+ G G S+++AE AA++AL+ +E Sbjct: 181 SPVYKSYEYHDENNHEMFKSEVYVND-KNFSSGIGKSKKEAETEAAKKALENIE 233 >UniRef50_D1CFY1 Ribonuclease III n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFY1_THET1 Length = 234 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/227 (40%), Positives = 130/227 (57%), Gaps = 16/227 (7%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHRFPR 62 LQ +LGY F + ELL+ ALTHRS +++ NER EFLGDSIL++V+ AL+ FPR Sbjct: 10 LQERLGYKFRNIELLKTALTHRSFANESLEKTETNERFEFLGDSILAFVVGEALFRLFPR 69 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG ++R RA LV LA+++R +G+ + LG G SG + ES+LAD +EALI Sbjct: 70 ASEGILTRARAHLVGRKNLADISRTLGIGDFILLGKGARLSGSSQSESVLADALEALIAA 129 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ---V 179 V+LDSD++T ++ + +EI KD KTRLQE + P Y V+ V Sbjct: 130 VYLDSDLETCRSVVFRLLRLSKEEIEHWLDVKDNKTRLQELSHRLYRTNPIYTVIAAPPV 189 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 R F + +V+ +S G G S+ +AEQ AA +AL + + Sbjct: 190 R-----DNFIVQVKVNDVSAQ--GEGRSKSEAEQEAARKALDVFDFK 229 >UniRef50_C0GHL1 Ribonuclease III n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHL1_9FIRM Length = 233 Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/230 (38%), Positives = 130/230 (56%), Gaps = 12/230 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYH 58 +N L ++L ++E+ QALTH S S HNERLEFLGD++L VI+ AL+ Sbjct: 6 LNYLFKQLNIEPKNREIYIQALTHSSYAHEHNLGSHAHNERLEFLGDAVLELVISEALFK 65 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP + EG ++R RA +V ++L ++A ELG+ LRLG GE SGG +R S+LAD EA Sbjct: 66 RFPLLPEGKLTRFRAGMVCEDSLFKIANSLELGKYLRLGKGEAASGGRQRPSLLADAFEA 125 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G ++LD V++ + + ++++ G + D KT +QEY Q P Y +V Sbjct: 126 MLGAMYLDQGFYVVQETVTGIFAPLFEDMAKGSMRHDYKTLMQEYTQASLATTPEYRIVA 185 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK--AEQAAAEQALKKLELE 226 +G H + F L+ V G GS R K AEQ AA A ++L E Sbjct: 186 EQGPDHSKVFVAQLL---LNREVYGEGSGRSKKEAEQEAARVAYQQLRAE 232 >UniRef50_Q9ZLH2 Ribonuclease 3 n=45 Tax=Epsilonproteobacteria RepID=RNC_HELPJ Length = 239 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 130/224 (58%), Gaps = 4/224 (1%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSAS-SKHNERLEFLGDSILSYVIANALYHRF 60 NP + L++ LGY+F + LL+QALTH+S + +NERLEFLGD++L VI LYH+F Sbjct: 16 NPYLT--LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKF 73 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 + DEG +S++RA++V + +LA+ L + LR+ E S G + SIL+ EAL+ Sbjct: 74 YQYDEGKLSKLRASIVSAHGFTKLAKAIALQDYLRVSSSEEISKGREKPSILSSAFEALM 133 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 GV+L++ + V K+I N + D KT LQE Q + +PTY ++Q + Sbjct: 134 AGVYLEAGLAKVRKIIQNLLNRAYKRLDLEHLFMDYKTALQELTQAQFCVIPTYQLLQEK 193 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H +EF + + G S+++AEQ A QAL+KL+ Sbjct: 194 GPDHHKEFEMALYIQD-KMYATAKGKSKKEAEQQCAYQALQKLK 236 >UniRef50_Q6ANV0 Ribonuclease 3 n=2 Tax=Desulfobulbaceae RepID=RNC_DESPS Length = 241 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 127/224 (56%), Gaps = 11/224 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRS------ASSKHNERLEFLGDSILSYVIANALYHRFPR 62 ++K+ Y F LLQ+AL H S + K+NERLEF+GD++L V+ NALY RFP Sbjct: 19 FEKKINYKFIDLRLLQKALIHSSYAFEQAQAGKNNERLEFVGDAVLDLVVGNALYRRFPE 78 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EG+++R+RA LV LA +AR+ LG L LG GE S G + SIL+ EA+IG Sbjct: 79 MREGELTRLRAALVNEGHLATMARKINLGYFLCLGKGEDNSKGREKSSILSCAYEAVIGA 138 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +F D V L+ ++ +D D K+RLQE LQ +H P+Y + G Sbjct: 139 IFQDGGYDAVAALVERFFLPVIDRRKEDLLLADAKSRLQEILQEKHNEGPSYRLDNEEGP 198 Query: 183 AHDQEFTIHCQVSGLSEPVVGTG--SSRRKAEQAAAEQALKKLE 224 +H + FTI + V+GTG S+++AEQ A A+KK+E Sbjct: 199 SHKKRFTISVL---FRDEVLGTGEAGSKKEAEQRGAALAIKKIE 239 >UniRef50_UPI000174552F putative Ribonuclease III n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174552F Length = 238 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 83/213 (38%), Positives = 125/213 (58%), Gaps = 11/213 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS------ASSKHNERLEFLGDSILSYVIANALYHR 59 ++ L+ ++ Y F ELLQ+ALTH S +HN+RLE+LGD++L V++ A+YH+ Sbjct: 1 MDSLESRIAYQFKQPELLQEALTHPSLPYESKNPQRHNQRLEYLGDAVLQLVLSEAIYHQ 60 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP DEG ++++R LV+ TLA +AR+ LG L LG GE +GG RES LAD +E++ Sbjct: 61 FPLDDEGLLTKLRTRLVQTRTLAHIARQLCLGRDLLLGKGEESNGGRSRESTLADVMESI 120 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG V+LD I+ V +L + L + + +PK +LQE LQG PTY ++ Sbjct: 121 IGAVYLDGGIEAVRPFVLQHWSHDLAALQHSPVELNPKGQLQELLQGEGGNTPTYRIIAA 180 Query: 180 RGEAHDQEF--TIHCQVSGLSEPVVGTGSSRRK 210 G H + F + Q L+ GTG S+++ Sbjct: 181 EGPDHQKVFQAVVVWQDRDLA---AGTGRSKKE 210 >UniRef50_B6WR93 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR93_9DELT Length = 243 Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 88/226 (38%), Positives = 129/226 (57%), Gaps = 8/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHR 59 + R++R L Y F+ E + ALTH S +++H NERLEFLGD++L I+ L+ R Sbjct: 16 LERIERILDYHFSRPERVALALTHSSWANEHGLGQAHNERLEFLGDAVLELCISWELFTR 75 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP+ EGDM+R+R+ LV +LA+ ARE + + LRLG GE + GG R+++L+D EA+ Sbjct: 76 FPQAREGDMTRVRSQLVGTTSLAQRARETGIDQLLRLGRGEEQQGGRSRDAVLSDVFEAV 135 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGD-KQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 + V+ D +K++ + T LDE+S G K KD KT LQE P Y + Sbjct: 136 LASVYEDGGYAAAQKVVARIFGTLLDEVSVGKPKTKDFKTSLQERSVALFHDRPVYTTLA 195 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H + FT+ + + +GSS +KAEQ AA AL L+ Sbjct: 196 CEGPEHARHFTVQVSLPS-GQQFTASGSSCKKAEQEAARLALCALD 240 >UniRef50_UPI00016BFC87 Ribonuclease III n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC87 Length = 239 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 87/226 (38%), Positives = 128/226 (56%), Gaps = 12/226 (5%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANAL 56 +V+ ++K+ YTF ELL ALTH S +++H NERLEFLGD+IL +++ L Sbjct: 9 VVLESFEKKIEYTFKRIELLDLALTHSSYANEHREQGVKDNERLEFLGDAILDLIVSEYL 68 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + ++P EGD+S+ RA++V +LA+ + ELG+ + LG GE GG RESI+AD Sbjct: 69 FKKYPESQEGDLSKFRASIVCEASLAKAGKRLELGKYILLGHGEEMGGGRDRESIIADAF 128 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+ G + +DS + V+ + + S KD KT LQ Q + Y V Sbjct: 129 EAVTGAMLIDSSYEDVKTYLAKTLIEFIKHTSATKLYKDYKTILQIESQKNVNTVIAYEV 188 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR--RKAEQAAAEQAL 220 V+ +G H++EF + + +G V+G GS R R AEQ AA QAL Sbjct: 189 VEEKGPDHEKEFVVELKQNG---KVIGKGSGRTKRDAEQVAAHQAL 231 >UniRef50_A9WJ69 Ribonuclease 3 n=3 Tax=Chloroflexus RepID=RNC_CHLAA Length = 244 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 116/208 (55%), Gaps = 13/208 (6%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH---------NERLEFLGDSILSYVIANALYHR 59 L+R +G TF + LLQ A HRS ++ NERLEFLGDS+L +V L+ Sbjct: 8 LERAIGITFRDRTLLQTAFMHRSLFNEQPHLLNHLTDNERLEFLGDSVLHFVTTTWLFET 67 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP DE ++ RA LV LAE A +F LG+ L GE GG R+ +LAD EAL Sbjct: 68 FPDQDEATLTNWRAALVSTKGLAECAAQFNLGQYAYLSRGEDNPGGRSRQKLLADLFEAL 127 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G ++LD ++T I+ ++Q R+++I D DP TRLQE +Q R LP Y + + Sbjct: 128 VGAIYLDQGLETARAFIVPFWQARIEQIIHID--LDPTTRLQELMQARFKQLPDYSIEEE 185 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 RG H +E+ + V+G G+GSS Sbjct: 186 RGPEHQREYVMAVTVAG--RKFTGSGSS 211 >UniRef50_D1AY72 Ribonuclease III n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AY72_STRM9 Length = 233 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 78/235 (33%), Positives = 134/235 (57%), Gaps = 12/235 (5%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN-------ERLEFLGDSILSYVIA 53 M + + +L K+ YTF +++LL +ALTH S ++HN ERLEFLGDS++ + Sbjct: 1 MKKMDLEKLMSKINYTFKNKKLLLEALTHSSYVNEHNFPNIKDNERLEFLGDSVMDLITT 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 +Y + +EG++S++++ ++ + ++R+ LG + L GE SGG R S+L Sbjct: 61 EYIYKNNLKSNEGELSKIKSQIISETVFSTISRDLNLGNYIFLSNGENMSGGRERNSVLG 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA++G ++LDSD T ++L +++++ + + D K+ LQE Q ++ P Sbjct: 121 DVFEAMVGAIYLDSDYATTRDVVLKLLESKINNLDKIEWVSDYKSALQEITQLKYKVTPI 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTG--SSRRKAEQAAAEQALKKLELE 226 Y V+ G HD+ F I +V E + G G S++ AE+ AA+QA++KL E Sbjct: 181 YTVLSEIGPDHDKTFEIEVRV---EERLYGKGVAKSKKMAEKIAAKQAIEKLNKE 232 >UniRef50_A8ZZF3 Ribonuclease III n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZZF3_DESOH Length = 231 Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 125/219 (57%), Gaps = 9/219 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYHRFP 61 L++ L Y F LL +AL H S + + NERLEFLGD+ LS I + L RFP Sbjct: 6 LEQHLVYRFTDTGLLAKALRHSSYVNEQADPAMEDNERLEFLGDAALSLCIGHLLMARFP 65 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EGD+S+ RA LV LA++ R LGE + LG GE ++ G ++SILA+ VEAL+G Sbjct: 66 ELSEGDLSQTRAGLVNAGWLADIGRSMNLGEYVLLGKGEEQTNGRNKDSILANAVEALLG 125 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD V ++ + ++ ++ ++ D ++ K+ LQE Q PTY ++ G Sbjct: 126 AIYLDGGFDAVMAVVRHKFENDIEALAALDMNRNYKSLLQELTQATDGKAPTYEIIDETG 185 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 HD+ F HC+VS G+G +++ A+Q AA +AL Sbjct: 186 PDHDKTF--HCRVSAGDIQAEGSGKNKKTAQQDAAHKAL 222 >UniRef50_Q8RGX3 Ribonuclease 3 n=10 Tax=Fusobacterium RepID=RNC_FUSNN Length = 234 Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 127/222 (57%), Gaps = 9/222 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 L+ KL Y FN + LL+ AL H+S ++ NERLE LGD++L ++A LY + Sbjct: 7 LEHKLNYYFNDRNLLKNALLHKSLGNERKEYKNQTNERLELLGDAVLDLIVAEYLYKSYK 66 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG +++++A +V LA+++R+ +G+ L L GE+ SGG RESILAD+ EA++G Sbjct: 67 NASEGPIAKLKAMIVSEPILAKISRQIGVGKFLMLSRGEVMSGGRNRESILADSFEAILG 126 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V++DS++ L+ + +D I + D K+ LQEY+Q +PTY +V RG Sbjct: 127 AVYIDSNLDEARVFALSHIKQYIDHIEENEDILDFKSILQEYVQKEFKTVPTYELVAERG 186 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H +EF I V E V +++KAEQ +A+ KL Sbjct: 187 PDHMKEFEIQVIVGNYKEKAV--ARNKKKAEQLSAKALCIKL 226 >UniRef50_Q5GTI3 Ribonuclease 3 n=17 Tax=Rickettsiales RepID=RNC_WOLTR Length = 243 Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 128/222 (57%), Gaps = 10/222 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHN-------ERLEFLGDSILSYVIANALYHRFP 61 + + + Y F + +L++ALTH S + +++ ERLEFLGDSIL+ +++ L+ FP Sbjct: 18 ISKIINYRFKNDAILEEALTHPSLNKRNSKNQIENYERLEFLGDSILNMIVSAILFRLFP 77 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG ++R + LV GNT+A +A+E +LG + + E +GG R L + +EALIG Sbjct: 78 KEKEGALARRKTDLVCGNTIANVAKEIKLGNFIIMNNSERCNGGKRNLKNLENALEALIG 137 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +++D V+K + ++ R + +DPKT LQE+ Q LPLP Y +++ G Sbjct: 138 AIYIDGGFANVKKFVTKHWEERAKGML--SLPQDPKTSLQEWTQKNKLPLPEYELMKQTG 195 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 AH EFTI + + V SS++ AEQ AAE L+K+ Sbjct: 196 PAHSPEFTISICIENYGK-VFACASSKKVAEQKAAELMLEKI 236 >UniRef50_D0GJ73 Ribonuclease III n=2 Tax=Leptotrichia RepID=D0GJ73_9FUSO Length = 238 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 135/228 (59%), Gaps = 12/228 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 + L K+ Y F ++ L++ALTHRS S++H NE+LEFLGD++L+ + +Y+ Sbjct: 6 VEELMEKIDYKFRNESYLKEALTHRSFSNEHEKSKNFDNEKLEFLGDAVLNLITTEYIYN 65 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +EG+++++++ ++ + +A E LG+ L L GE SGG +R+SIL D EA Sbjct: 66 SGKGKNEGELAKLKSQIISEPVFSAIAAEIGLGDYLYLSNGEESSGGRKRKSILGDAFEA 125 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LIG VFLDSD T + L + +++ + + D KT LQE Q ++ +P Y ++ Sbjct: 126 LIGAVFLDSDYYTAKNTALKFLPDKINNLEDIEGIIDYKTVLQEVFQSKYKKMPEYEILD 185 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGT--GSSRRKAEQAAAEQALKKLE 224 +G H++ F I + L+ ++G G S+++AE+ AA++A++ +E Sbjct: 186 TKGPDHNKVFEISVK---LNNKIIGIGRGKSKKEAEKRAAKEAIEFIE 230 >UniRef50_B6IN01 Ribonuclease III n=1 Tax=Rhodospirillum centenum SW RepID=B6IN01_RHOCS Length = 236 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 94/225 (41%), Positives = 124/225 (55%), Gaps = 11/225 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS------ASSKHNERLEFLGDSILSYVIANALYHR 59 ++ L+ LGY F H++LL QALTH S + + ERLEFLGD +L VIA L R Sbjct: 11 LSELETGLGYHFRHRDLLVQALTHPSLGGVERNAGRGYERLEFLGDRVLGLVIAEWLLER 70 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EG ++R LVR L +A LG LRL P E SGG + +ILAD EA+ Sbjct: 71 FPAEAEGALARRHTALVRAEALTVVAETIGLGPFLRLAPSERDSGGQAKPAILADACEAV 130 Query: 120 IGGVFLDSDIQTVEKLI-LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 IG +F D ++ LI W ++SP +DPKT LQE+ GR PLP Y + Sbjct: 131 IGAIFQDGGLEPARTLIRTRWTPLIEADLSP---PQDPKTALQEWALGRGRPLPAYETLS 187 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H F + +V G +EP TG S+R AE+AAAE L+++ Sbjct: 188 REGPDHAPVFRVRVRVEG-AEPATATGPSKRAAEKAAAEALLRQI 231 >UniRef50_C9RJ88 Ribonuclease III n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ88_FIBSS Length = 270 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 130/222 (58%), Gaps = 8/222 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYHRFP 61 L+ KLGY F ELL AL HRS + +NERLEFLGDS+L+ + LY +P Sbjct: 23 LEAKLGYRFRDPELLAHALVHRSFLVGKDVPYASNNERLEFLGDSVLNMLTTEFLYRTYP 82 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG++S+ ++ +V G+ A+ ++E++L E +++G E K GG +ESILAD EA++G Sbjct: 83 SDPEGELSKRKSAIVSGHACAQSSKEWDLSEYVKIGKSEAKMGGRGKESILADAYEAVLG 142 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+LD ++ V ++ ++ R+ EI + K+ L E+ QG+ P Y++V G Sbjct: 143 AVYLDGGLEEVRAILNKFHFPRVQEIISATDFVNYKSELLEFCQGKLRCSPEYVIVGEEG 202 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H + FT+ V+G S G G +++KAEQ A+ +L+ L Sbjct: 203 PEHQKVFTVEVVVNGKSY-ARGQGPNKKKAEQEASRLSLETL 243 >UniRef50_A9B5J8 Ribonuclease III n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5J8_HERA2 Length = 234 Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 126/210 (60%), Gaps = 11/210 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYH 58 +N+LQ +LGYTFN L+ A+ HRS A S+ NERLEFLGD++L+++ + L+H Sbjct: 3 LNKLQAELGYTFNDLNFLRAAMLHRSYVHEHPEAGSESNERLEFLGDALLNFICGSFLFH 62 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 FP + EGD+++ RA LV+ TLA LAR F LG +++ GE ++ R+++LAD EA Sbjct: 63 EFPELGEGDLTKTRAMLVQTRTLAGLARRFNLGSYVQISRGEERAKARERDNLLADAFEA 122 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+ + LD + +L ++ + G + +D KT LQ+Y+QGR P+Y V Sbjct: 123 LLAAIALDGGWEAARNFVLPLLKSV---KASGVQNQDYKTDLQQYVQGRINLTPSYREVN 179 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 V G H++ +TI +G + VG G+S+ Sbjct: 180 VTGPDHERTWTIEVW-AGDALLGVGVGTSK 208 >UniRef50_B5JG37 Ribonuclease III n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG37_9BACT Length = 263 Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 89/230 (38%), Positives = 133/230 (57%), Gaps = 16/230 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS------ASSKHNERLEFLGDSILSYVIANALYHR 59 + RL+ KLGYTF + LL Q+LTH S K+N+RLEFLGDS++ V+ LY + Sbjct: 36 VKRLENKLGYTFKTKGLLHQSLTHPSFLLNTKDQLKNNQRLEFLGDSVIQLVLTEKLYEK 95 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP + EG ++ +R+ RG+ +A +ARE +LG+ L L P + +G +S L D EAL Sbjct: 96 FPSLREGKLTSIRSGYARGDYMAGIARELKLGDYLILKPKDRNAGVAENDSALGDAFEAL 155 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQ--KDPKTRLQEYLQGRHLPLPT-YLV 176 IG ++LDSD +T K+IL Y LD +P K +PK +LQE +Q H Y Sbjct: 156 IGAIYLDSDFETSRKIILELYNY-LD-TAPTAKGVIANPKGKLQELIQPVHGNNALRYET 213 Query: 177 VQVRGEAHDQEF--TIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + GEAH++EF + C L + G G ++++A + AA A+ K++ Sbjct: 214 IAQTGEAHEREFEVAVFCHDEQLGK---GAGRTKKEAAEKAALIAIAKID 260 >UniRef50_B0VFA5 DsRNA-specific ribonuclease n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFA5_9BACT Length = 255 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 128/227 (56%), Gaps = 10/227 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNE---------RLEFLGDSILSYVIANAL 56 +++LQ+K+ YTF+ LL ALTH+S +H E R+EFLGDSIL ++++ L Sbjct: 28 LSQLQKKIDYTFHDPTLLYAALTHKSYLHRHFEDHKTPSPFERMEFLGDSILGFIVSKEL 87 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + R P EG +S++++ +V L A+ +LG+ L L P E +SGG + SIL+D + Sbjct: 88 FTRHPDEQEGKLSKLKSKIVSETYLTLKAKAIDLGKYLLLSPEEQQSGGASKPSILSDAM 147 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EALI ++LDS I + I N E ++ + K+ LQEY+Q R+ P PTY+ Sbjct: 148 EALICAIYLDSGISAATRFIRNHILNNYQETVTREELVNYKSILQEYMQSRNQPPPTYVT 207 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 V +G H + F + + G G G++++ A Q AA A +KL Sbjct: 208 VAEQGPEHHKTFVVEVRW-GNKLLGTGKGNTKKNAHQEAARMACQKL 253 >UniRef50_D1ATS9 Ribonuclease 3 n=1 Tax=Anaplasma centrale str. Israel RepID=D1ATS9_ANACI Length = 249 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 5/219 (2%) Query: 8 RLQRKLGYTFNHQELLQQALTHRS---ASSKHNERLEFLGDSILSYVIANALYHRFPRVD 64 R+ GY F +LL ++LTH S S+ + ERLEFLGD++LS ++ LY FP D Sbjct: 16 RVYEVTGYRFRDLDLLLESLTHPSLSRESAANYERLEFLGDAVLSMAVSEMLYRLFPDDD 75 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG +++ R LVRG+ + E+AR LG + + GE+ GG L + +EALIG ++ Sbjct: 76 EGCLTQKRTALVRGSEVVEIARSIGLGGLILMSSGEMSCGGSDNPGTLENALEALIGAMY 135 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 +D + + I + +R +S Q DPKT LQE++Q R +P Y +V G H Sbjct: 136 IDGSSEDYKNFIREHWFSRAQRMSSAPPQ-DPKTALQEWVQSRGWTVPLYKLVSKSGPEH 194 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 F + + G ++GTGSS++ AEQ AA+ LK++ Sbjct: 195 KPVFAVEVSIQGHGS-ILGTGSSKKLAEQEAAKLMLKRI 232 >UniRef50_Q0AYW0 Ribonuclease 3 n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RNC_SYNWW Length = 233 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 136/220 (61%), Gaps = 17/220 (7%) Query: 11 RKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDE 65 ++L Y+ N EL+ ALTH S + + +N+RLEFLGD++L+ V+A LY+ + R E Sbjct: 15 KQLPYSSN--ELITMALTHPSYAQEKNTVANNQRLEFLGDAVLNLVVAEYLYNHYGRKAE 72 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G+++++RA +V + LA AR LG+ L LG GE SGG +R+SILAD VEA+IG ++L Sbjct: 73 GELTKIRAKVVCEDALAIFARNINLGQYLLLGRGEEMSGGRKRKSILADAVEAVIGAIYL 132 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D ++TV++ I+ + + E + GD D K++LQE +Q R +Y +++ G AH Sbjct: 133 DQGLETVQRFIIRQLEELISETASGD-YYDYKSKLQELVQARDKENVSYAIIEESGPAHA 191 Query: 186 QEFTIHCQVSGLSEP----VVGTGSSRRKAEQAAAEQALK 221 + F V+G+ G G S+++AEQ AA++ L+ Sbjct: 192 KVF-----VAGVYYREQLLATGEGKSKKEAEQKAAQKVLQ 226 >UniRef50_Q72C44 Ribonuclease 3 n=9 Tax=Desulfovibrionaceae RepID=RNC_DESVH Length = 253 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 127/227 (55%), Gaps = 11/227 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59 ++ LQ+ +G+ F ELL A+TH S +++ HNERLEFLGD++L ++ L+ R Sbjct: 29 VDELQKTIGHRFGDMELLLTAMTHSSWANEQAVPVEHNERLEFLGDAVLELCVSEELFRR 88 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EGD++RMR+ LV +L +ARE L LRLG GE GG R S+L+D +EA+ Sbjct: 89 FPSAREGDLTRMRSRLVSKPSLEGVARELRLDMSLRLGKGEESQGGRERGSLLSDALEAM 148 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G VFLD+ + +++ E + KD K++LQE Q P Y ++ Sbjct: 149 LGAVFLDAGYIAAKGVVMRILGPHFPEALVPVRTKDYKSQLQELTQKLFRDRPVYTLLGS 208 Query: 180 RGEAHDQEFTIHCQVSGLSEPVV--GTGSSRRKAEQAAAEQALKKLE 224 G HD++F + L + V TG S ++AEQ AA +A+ L+ Sbjct: 209 SGPEHDKQFDVRVV---LPDGTVFEATGPSMKRAEQMAAARAVATLD 252 >UniRef50_Q2GIW0 Ribonuclease 3 n=17 Tax=Anaplasmataceae RepID=RNC_ANAPZ Length = 236 Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 123/213 (57%), Gaps = 6/213 (2%) Query: 14 GYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 GY F ELL+ A+TH S +++ ERLEFLGD++L V++ LY FP EG +++ Sbjct: 21 GYRFQDHELLKTAVTHPSIAAERYASYERLEFLGDAVLGLVVSEMLYTLFPDDSEGLLTK 80 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 R LVRG+ + E+A+ LG L + GEL SGG S L + +EALIG +++D ++ Sbjct: 81 KRIALVRGSKVVEIAQSLNLGNILLMSKGELTSGGISNNSNLENALEALIGAIYVDGGLE 140 Query: 131 TVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 +V IL ++ ++ Q D KT LQE+ QG + +P+Y ++ G H FT+ Sbjct: 141 SVRHFILQHWKPLATNLADTPLQ-DAKTALQEWAQGHNFAIPSYRLINKSGLEHAPVFTV 199 Query: 191 HCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 V+G + V TG ++ AE AAA+ L+K+ Sbjct: 200 EVTVNG--QRVHATGCKKKYAEIAAAKLMLEKV 230 >UniRef50_Q3AC58 Ribonuclease 3 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RNC_CARHZ Length = 235 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 86/225 (38%), Positives = 129/225 (57%), Gaps = 8/225 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 L++ LG+ FN+ +L A+TH S + +H NERLEFLGD++L I++ L+ FP Sbjct: 9 LEKILGFNFNNPSILLSAITHPSYAFEHPEEGIEHNERLEFLGDAVLELFISDYLFRTFP 68 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EGD++++R+ LV +L ELA + L + LRLG GE K+GG +R S LA+ VEA+IG Sbjct: 69 QKSEGDLTKLRSRLVCAESLYELAFKINLDKFLRLGKGEFKAGGNQRMSNLANAVEAVIG 128 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+ D I+ I Y +L + KD KT LQE LQ + Y ++ G Sbjct: 129 AVYFDCGIEAAFSFITRLYGEKLKPENLEQLPKDEKTTLQELLQKEKNNVLRYEILLEEG 188 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H + FT ++ G G S+++AEQ AA++AL+ L+ E Sbjct: 189 PPHQKIFTAGVIIND-KLIATGRGKSKKEAEQEAAKKALELLKNE 232 >UniRef50_Q0SMF0 Ribonuclease 3 n=21 Tax=Borrelia RepID=RNC_BORAP Length = 245 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 125/218 (57%), Gaps = 7/218 (3%) Query: 13 LGYTFNHQELLQQALTHRSAS------SKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 L FN+ +LL AL+H S S S +NERLEFLGDS+L+ +I + LY +P EG Sbjct: 25 LSIDFNNFDLLNTALSHSSYSNELDQKSDNNERLEFLGDSVLNLIITDHLYKTYPNKSEG 84 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++S+ R+ +V ++L+ +ARE +LG + LG GE + G ++ ILAD +EA +G ++LD Sbjct: 85 ELSKARSYIVSEDSLSSIAREIDLGSYILLGRGEESNDGRNKKGILADAIEAFVGAIYLD 144 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 S + ++ + + + KD K+ LQEY+Q ++ P Y + + G HD+ Sbjct: 145 SGFLIATEFVVGLFDMYIRLMFNRGDFKDYKSLLQEYVQKKYKISPNYKLDKEIGPDHDK 204 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 F + V G G G S+++AE AAE ALK +E Sbjct: 205 VFCVELYV-GEKFISNGKGKSKKEAEMRAAEVALKAME 241 >UniRef50_C3PH92 Ribonuclease III n=12 Tax=Corynebacterium RepID=C3PH92_CORA7 Length = 256 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 125/220 (56%), Gaps = 8/220 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRV 63 L + LG N ELL ALTHRS ++++ NERLEFLGD++L IA LY ++P Sbjct: 25 LLKALGVEIN-DELLCLALTHRSFANENGHLPNNERLEFLGDAVLGLSIAAKLYEKYPSR 83 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 E D+S+MRA++V L+++ARE +GE + LG GE +GG ++SILADT EA++G + Sbjct: 84 PESDISKMRASIVSRYGLSDVAREIGVGEHVLLGKGEQSTGGRDKDSILADTTEAILGAI 143 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 + + ++L + ++D + D KT LQE +P Y G Sbjct: 144 YRQHGFEVARGVVLKLFAAKIDNAVVSGRHMDWKTTLQELCAELKAAMPVYSATST-GPE 202 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 HDQ F V+GL+ GTG +++ AEQ AAE+A + L Sbjct: 203 HDQTFNAVATVAGLTVG-RGTGHNKKLAEQQAAEEACQAL 241 >UniRef50_B1ZYU8 Ribonuclease III n=2 Tax=Opitutaceae RepID=B1ZYU8_OPITP Length = 250 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 90/234 (38%), Positives = 130/234 (55%), Gaps = 16/234 (6%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIANA 55 +P + LQ +L YTF LL++A+TH S ++ N+RLEFLGD++L ++ A Sbjct: 20 SPSPLAALQTRLIYTFRDPALLERAVTHTSYLPENPDIAESNQRLEFLGDAVLQLILTEA 79 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ FP EG +SR RA L +G L ELARE +L CL LG E SGG R S L D Sbjct: 80 LFELFPGDREGPLSRRRAALTKGAFLVELARELQLDRCLLLGSSEEASGGRTRSSALEDA 139 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT-Y 174 EAL+G ++LDSD+ +++L Y +S +++PK RLQE +Q + Y Sbjct: 140 FEALVGALYLDSDLALTRRIVLGLYGDLPSRLSGVVNEENPKGRLQELIQPEYGNQALRY 199 Query: 175 LVVQVRGEAHDQEFTI----HCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 V + GE H + + + H +V G G G S++ AE+AAA AL+ L+ Sbjct: 200 EVTGIEGEDHARAYEVAVFLHDRVLG-----SGRGPSKKLAEEAAARVALETLK 248 >UniRef50_C8X2M7 Ribonuclease III n=4 Tax=Desulfovibrionales RepID=C8X2M7_DESRD Length = 237 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 11/233 (4%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIAN 54 M+ V+ +Q++L YTF Q+LL ALTH S +++H NERLEFLGD++L I+ Sbjct: 1 MDDSVLRLVQQRLQYTFRDQQLLLLALTHSSYANEHPHIQEHNERLEFLGDAVLELAISE 60 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY R+P EG ++ +R+ LV LA L R+ E+ L LG GE GG R++IL D Sbjct: 61 ELYLRYPEAPEGSLTSLRSKLVSEPALAALGRQLEIAPALFLGRGEESQGGRERDAILCD 120 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPG---DKQKDPKTRLQEYLQGRHLPL 171 +E++ G +FLDSD + IL Y + +P ++ +D K+RLQE Q Sbjct: 121 VMESIFGAIFLDSDYDRAKTCILELYVDKWPS-APSLGHERLRDFKSRLQECTQQLFKDR 179 Query: 172 PTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 P Y +V G H + + + + S+ SS +KAEQ AA +AL+ L+ Sbjct: 180 PVYHLVDSTGPEHAKVYHVRVDLPNGSQ-ASAADSSVKKAEQQAARKALESLQ 231 >UniRef50_O69161 Ribonuclease 3 n=2 Tax=Alphaproteobacteria RepID=RNC_BRAJA Length = 250 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 120/214 (56%), Gaps = 9/214 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIANALYHRFPR 62 L+ ++G++F LL Q +TH SA +RLEFLGD +L V+++ LYH FP Sbjct: 25 LEARIGHSFADPNLLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAFPN 84 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 DEG++S+ A LVR + A++A+ L + ++LG + R+S+L D EA+IG Sbjct: 85 ADEGELSKRLAELVRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVIGA 144 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +FLD + + + R+ + P +DPKT LQE+ QG+ LP P Y V+ G Sbjct: 145 IFLDGGHAAAAEFVKRNWTERMHK--PRRPLRDPKTVLQEWAQGKGLPTPVYREVERTGP 202 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAA 216 HD +F + + GL+ P G G S+R AE+ AA Sbjct: 203 HHDPQFRVAVDLPGLA-PAEGIGGSKRAAEKVAA 235 >UniRef50_C6V631 Ribonuclease III n=2 Tax=Neorickettsia RepID=C6V631_NEORI Length = 222 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 89/225 (39%), Positives = 128/225 (56%), Gaps = 11/225 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA-SSKHNERLEFLGDSILSYVIANALYHRFPRVD 64 + LQ LG F ++ELL +ALTH S ERLEFLGD++L+ V+A+ LY FP Sbjct: 3 LEELQSLLGVHFKNKELLVEALTHPSVEKCPSYERLEFLGDAVLNLVVASMLYDLFPGDP 62 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG +S+ ++ LV LA LAR+ LG+C+RL E SGG + + L + +EALIG +F Sbjct: 63 EGRLSQRQSVLVCKTALAMLARQMNLGDCIRLSSSEEASGGRDKTNNLENVLEALIGAIF 122 Query: 125 LDSDIQTVEKLI-LNWYQTRL--DEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 LD+ +TV I +WY+ + D I P +PK+ LQE LQ + + P Y V+ G Sbjct: 123 LDAGFETVTCFIQKHWYELAVQSDSIEP-----NPKSALQELLQAKGMKPPVYNVIDRSG 177 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 AH F + V G + TG S++ E+ AA L++L+ E Sbjct: 178 PAHLPIFEVEICVDG--KKRRATGRSKKLGEENAARMMLEELKAE 220 >UniRef50_B0K1V8 Ribonuclease III n=19 Tax=Clostridia RepID=B0K1V8_THEPX Length = 246 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 124/211 (58%), Gaps = 9/211 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS------ASSKHNERLEFLGDSILSYVIANALYHR 59 ++ L+ ++ Y+F + LL +ALTH S S NERLEFLGDS+LS VI+ LY Sbjct: 20 LSELEERINYSFKDKNLLIEALTHSSWAHEGKNSKISNERLEFLGDSVLSLVISEYLYKN 79 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 ++EG +S+ RA +V +LA ARE ELG LR+G GE +GG R+SILAD +EA+ Sbjct: 80 RKDLEEGSLSKYRAEIVCEPSLARCAREIELGNFLRIGKGEELTGGRERDSILADAMEAI 139 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 + V+LD ++ V +IL ++ ++E+ G +D KT+LQE +Q + Y +++ Sbjct: 140 LAAVYLDGGLEVVRNVILELFKNIIEEVLEGLIYRDYKTKLQEVVQSMEIGKIIYELIEE 199 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 G H++ F ++ + ++G G + K Sbjct: 200 MGPDHNKTFVTQVRI---GDVILGKGYGKSK 227 >UniRef50_A0LGM1 Ribonuclease 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=RNC_SYNFM Length = 242 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 87/227 (38%), Positives = 128/227 (56%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANALYH 58 + LQ LGY F + LL +AL HRS K NE LEFLGD++L I++ L Sbjct: 7 LEALQNLLGYRFGDEGLLHRALVHRSYLHENPHLDEKDNETLEFLGDAVLGLAISHFLLE 66 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +FP +EG++SR+R+ +V L +A E LGE L LG GE +GG R+ S+LAD++EA Sbjct: 67 QFPDYNEGELSRLRSAIVNERELTRIAVELNLGEYLLLGKGEEMTGGRRKASLLADSLEA 126 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRL----DEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 L+ ++LD + V +I + L E KD KT+LQE Q R+ P Y Sbjct: 127 LLASIYLDGGLDAVLGVIKKLFDVYLRFEKREHVLKALDKDYKTQLQELTQARYKLTPVY 186 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 ++ + G HD+ F ++ + G G+G S++ A+QAAAE+AL+ Sbjct: 187 VLDREEGPDHDKTFHMNVVLEG-QVLAGGSGKSKKDAQQAAAEKALQ 232 >UniRef50_B2S448 Ribonuclease 3 n=2 Tax=Treponema pallidum RepID=RNC_TREPS Length = 254 Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 86/226 (38%), Positives = 121/226 (53%), Gaps = 9/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS--------KHNERLEFLGDSILSYVIANALY 57 + RLQ LG F L QAL+HRS S +HNER+EFLGD++L V A LY Sbjct: 24 LRRLQETLGVKFRDPTALDQALSHRSLFSSKEDHCGVRHNERMEFLGDAVLGAVAAACLY 83 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 P EGD+++ +A LV +TL+++A + L LG GE SGG +++ILAD E Sbjct: 84 RALPDSHEGDLAKTKAVLVSTDTLSDIALSLRIDHYLLLGKGEELSGGRHKKAILADATE 143 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+IG +FLDS + E+ +L R+ I + D K+ LQ R+ P Y VV Sbjct: 144 AVIGALFLDSGFKAAERFVLRLLLPRVRPIREKNLHHDYKSTLQVLAHQRYRSKPEYTVV 203 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + G H F + V G + G G+S++ AEQ AA A ++L Sbjct: 204 KRTGPDHSVRFWVDVTV-GDARFGPGYGTSKKSAEQCAARLAWEQL 248 >UniRef50_A1APX0 Ribonuclease III n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1APX0_PELPD Length = 234 Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 83/207 (40%), Positives = 115/207 (55%), Gaps = 8/207 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRS-----ASSKHNERLEFLGDSILSYVIANALYHRFPRV 63 L+R++ Y F Q L QALTH S A + +RLEFLGD++L V+A L+ RFP Sbjct: 8 LEREIAYRFIDQAPLLQALTHPSFEHEQAGGGNYQRLEFLGDAVLGMVLAEMLFRRFPDS 67 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 +EG +SR+R+ + +TLA +AR F LG +RLG GE + G ++SILAD +EALI V Sbjct: 68 NEGVLSRLRSQIADQDTLAGIARSFGLGRFVRLGRGEEQGAGRNKDSILADVLEALIAAV 127 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 +LD ++ +LI + L+ + D K+ LQE L R LP P Y + G Sbjct: 128 YLDGGLKESRRLIQRLFVAILESRGARLRFNDAKSELQELLSARRLPSPVYRLTGESGPP 187 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRK 210 HD+ F V + VVG G R K Sbjct: 188 HDRLFIFQVLV---DDAVVGEGEGRSK 211 >UniRef50_Q4JUY7 Ribonuclease 3 n=9 Tax=Corynebacterium RepID=RNC_CORJK Length = 244 Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 124/208 (59%), Gaps = 8/208 (3%) Query: 21 ELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 +LL+ ALTHRS ++++ NERLEFLGD++L +A LY +FP E D+S+MR+ + Sbjct: 36 DLLRLALTHRSFANENGHLPNNERLEFLGDAVLGLAVAEQLYRQFPERAESDISKMRSGV 95 Query: 76 VRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKL 135 V LA++AR +G+ + LG GE+ +GG + SILAD+VE+++G ++L + Sbjct: 96 VNMYALADVARRLGMGDYILLGRGEMLTGGKDKHSILADSVESMLGAIYLHHGFEVARAT 155 Query: 136 ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVS 195 +L + ++ E D KT L E L LPLPTY +VRGE + + T + V+ Sbjct: 156 VLRLFAEKITEAPTTGLTMDWKTVLLEKLSDMKLPLPTY---EVRGEGPEHDKTFYATVT 212 Query: 196 GLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G G +++ AE AAA+QA++KL Sbjct: 213 IEDLVTHGEGHTKKVAEHAAAKQAVQKL 240 >UniRef50_C0QLB1 Two domain fusion protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLB1_DESAH Length = 520 Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 129/223 (57%), Gaps = 9/223 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFP 61 L++ LG+TF ++ELL+ AL H S ++ N+RLEF+GD++L I L P Sbjct: 296 LEKNLGHTFANRELLENALRHSSYVNELQANQVPDNQRLEFMGDAVLGLTIGQILMEEHP 355 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 ++EG +S+ RA LV LA +AR+ +LG +RLG GE S G + SILAD EA++ Sbjct: 356 GMNEGSLSKARAALVSEPALASMARQIDLGRFIRLGKGERLSRGSEKNSILADAFEAVMA 415 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD + L+ + +++ I+ + +D K+ LQE++Q + P Y + + G Sbjct: 416 AIYLDCGFKQTCALVKEQFISQIKLINSAPEIEDFKSMLQEFVQEKGNTPPCYTIHREFG 475 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 HD+ F+I + + +G+G S++ AEQ AA+ ALK L+ Sbjct: 476 PDHDKTFSICVKACDIES--MGSGKSKKAAEQHAAQNALKSLK 516 >UniRef50_D2LJ11 Ribonuclease III n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJ11_RHOVA Length = 236 Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 115/206 (55%), Gaps = 7/206 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS----KHNERLEFLGDSILSYVIANALYHRFP 61 + L+ LGY F + LL +ALTH SA S + NERLEFLGD +L IA L+ RFP Sbjct: 8 VEELEASLGYKFQERGLLAEALTHSSARSEKGGRDNERLEFLGDRVLGLSIAALLFERFP 67 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + E +++R LV T AE+A + ELG L + P E +SGG +++ ILAD VEAL+G Sbjct: 68 KAREVELARHFNALVCKTTCAEVALKLELGPHLVMAPSEARSGGRKKDVILADAVEALLG 127 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 + +D E ++ ++ + P D KT LQE+ Q + LP Y V+ G Sbjct: 128 AISVDGGFAAAETVVHRHWEPFIASSEP--PAPDAKTALQEFAQSQKRGLPDYHEVERSG 185 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSS 207 H FT+ +V GL +P GTGSS Sbjct: 186 ADHAPNFTVEVRVQGL-KPERGTGSS 210 >UniRef50_B8FKR2 Ribonuclease III n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKR2_DESAA Length = 535 Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/219 (37%), Positives = 123/219 (56%), Gaps = 8/219 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYHRFP 61 L+ LGY F ELL +A+ H S + HNERLEFLGD++L+ +++ L ++ Sbjct: 309 LEEALGYNFKTPELLLEAMCHSSYVNEHPDCTWTHNERLEFLGDAVLNLAVSDMLMSKYS 368 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EGD+SR+RA+LV LAE+AR +G+ L LG GE + G+ + SILAD++EA+ G Sbjct: 369 ENREGDLSRLRASLVNEGQLAEIARSLGIGQHLLLGKGEARGRGWDKNSILADSLEAVFG 428 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 G++ DS K+I N + E +D KTRLQEY Q + P+Y +++ G Sbjct: 429 GIYSDSGYADAFKVIKNLIAPLIPEEVAVAAAQDYKTRLQEYAQSKLRITPSYELIREFG 488 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 H++ F V+ G G S++ AEQ AA + L Sbjct: 489 PDHEKTFVAQATVNK-EFTSQGKGRSKKAAEQDAAREVL 526 >UniRef50_D2RKZ6 Ribonuclease III n=2 Tax=Acidaminococcus RepID=D2RKZ6_ACIFE Length = 234 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 127/223 (56%), Gaps = 9/223 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSAS--------SKHNERLEFLGDSILSYVIANALYHRF 60 L R+LG LL ALTH S + +HN+RLEFLGDS+LS V++ +Y Sbjct: 12 LCRQLGMEMKDLHLLDMALTHTSYAYESKKNPRPQHNQRLEFLGDSVLSLVVSTHIYKTC 71 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P++DEG++S++RA LV TLA+LA E LG+ L LG GE+ G SILAD E+++ Sbjct: 72 PQMDEGELSKLRAFLVCEETLAQLATENHLGDHLLLGKGEINLDGEENPSILADAFESVL 131 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G +LD V L+ +R+ E++ +D KTRLQE +Q Y V Sbjct: 132 GAYYLDQGFARVTGLLNRLLISRIPELTADGIDRDYKTRLQEVVQKDGPAEILYDQVSAE 191 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G +H++ F + V+G +E G G ++++AEQ AA +ALK L Sbjct: 192 GPSHNRTFVMRVLVNG-NELGKGRGRTKKEAEQRAAREALKAL 233 >UniRef50_A5IN74 Ribonuclease 3 n=8 Tax=Thermotogaceae RepID=RNC_THEP1 Length = 240 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 130/229 (56%), Gaps = 11/229 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKHN----------ERLEFLGDSILSYVIAN 54 ++ Q+K G F ++ELL +AL H S +++ N E+LEFLGD++L + Sbjct: 8 IVEEFQKKTGINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVCE 67 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY ++P + GD++R ++ LA ++RE LG+ L LG GE K+GG R+SILAD Sbjct: 68 ILYKKYPEAEVGDLARAKSAAASEEVLAMVSRELNLGKFLFLGKGEEKTGGRDRDSILAD 127 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 EAL+ ++LD +++L ++ +++I G+ D KT LQE +Q H P Y Sbjct: 128 AFEALLAAIYLDQGYHKIKELFEEEFELYIEKIMRGEMLFDYKTALQEIVQSEHKVPPEY 187 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 ++V+ D+ F + +V G S +G G ++++AE+ AA A +KL Sbjct: 188 VLVRTEKNDGDRIFVVEVRVDGKS-IAMGRGRTKKEAEKEAARIAYEKL 235 >UniRef50_C8PI53 Ribonuclease III n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PI53_9PROT Length = 303 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 132/222 (59%), Gaps = 7/222 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVD 64 + +LQ KLGY F +Q L+ ALTH+SA + HN ERLEFLGD+++ ++ L+ +F D Sbjct: 4 LEKLQEKLGYKFKNQTHLKIALTHKSAKNGHNNERLEFLGDAVMDLIVGEYLFKKFSS-D 62 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EGD+S++RA LV ++ ++ A+ +GE L + E ++GG + S+L+D EA++G V+ Sbjct: 63 EGDLSKLRAALVNESSFSKFAKFLGIGENLNMSLSEERNGGREKPSLLSDAFEAIMGAVY 122 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 L+S +Q ++ + + IS + +D KT LQE Q + P Y+++ G H Sbjct: 123 LESGLQNTARIAIAILEILYPRISFNELVRDYKTALQELTQAKFGVTPEYILLGSSGPDH 182 Query: 185 DQEFTIHCQVSG--LSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + F + V G LS V G+S+++AEQ A+ A+ L+ Sbjct: 183 KKSFEMAALVGGKWLSSAV---GASKKEAEQKCAQIAIDLLQ 221 >UniRef50_A4GHU1 Ribonuclease III n=1 Tax=uncultured marine bacterium EB0_39H12 RepID=A4GHU1_9BACT Length = 218 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 N L Y+F +EL Q ALTH+S SS +NERLEFLGD+IL+ ++ L++ + + EG Sbjct: 3 NSAYTNLEYSFQDEELFQLALTHKSLSSHNNERLEFLGDAILNLYVSERLFNTYGNLKEG 62 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++R +A++V L +A EL ++LG GE G SIL + +EALIG +FLD Sbjct: 63 KLTRFKASIVSRENLHRVAINLELSNHIKLGKGESLQGN----SILGNVLEALIGAIFLD 118 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 SD + ++ N ++ ++ ++ KDPK+ LQE +Q ++ LP Y + + + + Sbjct: 119 SDYSETKNVLDNIFKDDFLKLVEEEELKDPKSTLQELIQKQYQSLPIYSLNEQISDKKEN 178 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 +F + C V + G G++R+ AE AA L+ Sbjct: 179 QFEVTCSVVEGNLVTQGKGNTRKGAELNAASNMLE 213 >UniRef50_Q6MLR5 Ribonuclease 3 n=1 Tax=Bdellovibrio bacteriovorus RepID=RNC_BDEBA Length = 234 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/222 (36%), Positives = 129/222 (58%), Gaps = 12/222 (5%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPR 62 L+ ++G+ F + LL++ALTH+S +++ HNE+LEFLGD++L V+ LY +FP Sbjct: 9 LEERVGHQFKNPALLERALTHKSFANELRNTVEHNEKLEFLGDAVLDLVVGEFLYEKFPT 68 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG +S+ RA++V L+ELA E L + ++LG GE +GG ++ ++A + EA++G Sbjct: 69 DTEGGLSKKRASIVNEEVLSELALEMGLNKLMQLGKGEALTGGAQKPRLIASSFEAIVGA 128 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPG-DKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD + I + D + D ++D KTRLQE +Q P Y V+ G Sbjct: 129 LYLDGGFEVARSFIRQEFVPLADRVCGHEDFERDYKTRLQELVQKSSKETPRYEVLAEEG 188 Query: 182 EAHDQEFTIHCQVSGLSEPVV--GTGSSRRKAEQAAAEQALK 221 HD+EF + +V E V G G S++ AEQ AA+ AL+ Sbjct: 189 PPHDREFLVCVKV---KEDVWAQGRGRSKKNAEQMAAKNALE 227 >UniRef50_Q0APC4 Ribonuclease III n=2 Tax=Hyphomonadaceae RepID=Q0APC4_MARMM Length = 228 Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 125/222 (56%), Gaps = 8/222 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRF 60 I RL++++GY F + L+++ALTH S + ERLEFLGD +L + A AL+ F Sbjct: 5 IARLEQRIGYVFTDKRLIERALTHGSFAEGRKTIPTYERLEFLGDRVLGLMTAEALFKSF 64 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 + DEG ++ ++VR T A++AR +LG LR+G E K GG + SIL D E+L+ Sbjct: 65 DKADEGALAPRLNSMVRKETCADVARAVDLGAALRIGKSEEKGGGRNKTSILGDACESLM 124 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD V+ + + R++ + K D K+ LQE+ +P Y + + Sbjct: 125 AAIYLDGGRAAVQAFFDHHWGPRIEALKA--KPLDAKSALQEWAAKTGRGVPRYELTERS 182 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G H FT+ V+ L+ P VG G S++ AE+AAAE+ LK+ Sbjct: 183 GPDHRPVFTVQVTVTPLA-PAVGEGGSKQVAERAAAEELLKR 223 >UniRef50_C7LRK0 Ribonuclease III n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRK0_DESBD Length = 242 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 83/223 (37%), Positives = 125/223 (56%), Gaps = 5/223 (2%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHRF 60 + LQ ++ Y F +LL QALTH S +++H NERLEFLGD++L ++ L+ +F Sbjct: 9 ALQALQNEIHYEFKQVKLLIQALTHSSHANEHGCPHNERLEFLGDAVLELAVSQELFRKF 68 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P V EG +++MR+ LV LA+ AR LG CL LG GE GG + S+L+D +EA++ Sbjct: 69 PEVQEGHLTKMRSALVSEGALAQAARRIHLGACLLLGRGEDVQGGREKNSVLSDALEAVL 128 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G V+LD ++ + Y + + +D K+ LQE Q P+Y + + Sbjct: 129 GAVYLDGGLERAITCVNFLYAGQWPTPPETFRPRDFKSLLQEATQRIWKARPSYALRESH 188 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H +++T+ + +E V S RKAEQ AAEQAL +L Sbjct: 189 GPEHAKQYTVVVTMPDKTE-VECEERSMRKAEQGAAEQALVQL 230 >UniRef50_Q47S78 Ribonuclease 3 n=73 Tax=Actinobacteria (class) RepID=RNC_THEFY Length = 240 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 86/228 (37%), Positives = 128/228 (56%), Gaps = 8/228 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANA 55 ++P + Q +G ++L +ALTHRS + ++ NERLEFLGDS+L V+ + Sbjct: 5 LSPAEVREFQETVGVEIA-PDILTRALTHRSYAYENGGLPTNERLEFLGDSVLGLVVTDT 63 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY P + EG ++++RA +V LA++ARE +G +RLG GE +GG + SILADT Sbjct: 64 LYRTHPDLSEGQLAKLRAAVVNMRALADVARELGIGRYVRLGRGEEATGGRDKSSILADT 123 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EALIG V+LD + +L+ + + S D KT LQE L +P Y Sbjct: 124 LEALIGAVYLDRGLDEASELVHRLFDPLIARASGLGAGLDWKTSLQELTAAELLGVPEY- 182 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 VV+ G H + F +V+G + G G S+++AEQ AAE A K + Sbjct: 183 VVEESGPDHQKTFRATVRVAGQTYG-SGEGRSKKEAEQQAAESAWKAI 229 >UniRef50_Q2LVR4 Ribonuclease III n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVR4_SYNAS Length = 240 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALY 57 + +L+ L F LL AL HRS +++ NERLEFLGD++L I++ L Sbjct: 8 ALKKLESHLSCAFRDITLLDNALVHRSYVNENPSLSFADNERLEFLGDAVLELCISDLLM 67 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 FP EG +S++RA++V LAELA++ +G + LG GE SGG + SILA+T+E Sbjct: 68 KAFPDYSEGQLSKLRASVVNEQPLAELAKKCRIGSFILLGKGEESSGGRSKPSILANTME 127 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+ VFLD + + + ++E + KD KT LQE Q R +P Y ++ Sbjct: 128 AITAAVFLDGGFDRAYEFVRRLFTPLIEEGNRSATYKDYKTTLQELSQNRFREIPRYRLI 187 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G HD+ F + G+ E G G S+++AEQ AA +AL +L Sbjct: 188 GEYGPDHDKLFESGLSIPGIIE-TTGKGKSKKEAEQHAAHKALDEL 232 >UniRef50_A7BCY7 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCY7_9ACTO Length = 240 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 121/211 (57%), Gaps = 7/211 (3%) Query: 22 LLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLV 76 LLQ AL HRS +++ +NERLEFLGDS+LS VIA LY ++P V E D+SRMRA V Sbjct: 30 LLQLALVHRSYANEAGGIANNERLEFLGDSVLSIVIAQKLYEQYPDVAESDLSRMRAATV 89 Query: 77 RGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLI 136 LA AR LG+ + LG GE GG ++SIL+DT EALIG +L S ++ ++I Sbjct: 90 SQQPLAAAARRIGLGDFVFLGKGESMHGGRDKDSILSDTFEALIGATYLTSGLEEARRVI 149 Query: 137 LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSG 196 L L + + +D KT L EY Q L +Y V+ G H + FT VS Sbjct: 150 LERLSFLLVDAPSRGQHQDWKTILIEYSQAHGLGEVSY-EVEGEGPDHQRVFTARAFVSE 208 Query: 197 LSEPV-VGTGSSRRKAEQAAAEQALKKLELE 226 +P+ G SS++ AE AAA+ A+ +L E Sbjct: 209 RPDPIGSGQASSKKHAENAAAQDAMSRLSPE 239 >UniRef50_B4WL11 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WL11_9SYNE Length = 228 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 84/217 (38%), Positives = 126/217 (58%), Gaps = 12/217 (5%) Query: 16 TFNHQELLQQALTHRS------ASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 TF + L QQA+TH+S +++HNERLEFLGD+IL+++ A L+ RFP+ EG+++ Sbjct: 15 TFTNSALWQQAMTHKSFANEQPTATEHNERLEFLGDAILTFLSAEYLFVRFPKQSEGELT 74 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS-- 127 MR+ LV + L A+ +L E LRLG G K G + +L EALIG FLD Sbjct: 75 PMRSALVDQSQLHRFAQGLKLDEYLRLGKGAEKEGARKSARLLCSAFEALIGAYFLDQEH 134 Query: 128 DIQTVEKLILNWYQTRL-DEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 ++Q V+ I +++ + ++ G KD KTRLQE+ Q +P Y+ + G H + Sbjct: 135 NLQLVKDYITPIFESAIAPDVEAG--VKDDKTRLQEWAQKTTGSVPEYVEISTLGPDHAK 192 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 EF I Q+ G S G+G S++KA++ AA L+ L Sbjct: 193 EFVIEVQIGGKSYG-RGSGRSKQKAQKLAARSTLEML 228 >UniRef50_D1B4H0 Ribonuclease III n=5 Tax=Campylobacterales RepID=D1B4H0_SULD5 Length = 227 Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 129/219 (58%), Gaps = 2/219 (0%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGD 67 LQ++LGY F +Q L+ +ALTH+S+ +N ERLEFLGD++L ++ LY F V EG+ Sbjct: 8 LQKRLGYQFKNQNLIIEALTHKSSKQPYNNERLEFLGDAVLDLIVGEYLYKEFLGVAEGE 67 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS 127 +S++RA+LV + +LAR LGE + + E + G + S+L++ EA+IG ++L++ Sbjct: 68 LSKLRASLVNEKSFEKLARLLHLGESIYISLAEENNNGREKPSLLSNAFEAIIGALYLEA 127 Query: 128 DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 ++ L ++ + +I +D KT LQE Q P Y +V+ G H +E Sbjct: 128 GLEKARTLAISLLEEAYPKIDMDAIFRDHKTTLQELTQAHFGVTPEYRLVRSFGPDHQKE 187 Query: 188 FTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 F I V G S+ + +G S+++A+Q AA AL+ L+ E Sbjct: 188 FEIAVSVRG-SDLSLASGKSKKEAQQKAALLALEILKKE 225 >UniRef50_C8NEF3 Ribonuclease III n=2 Tax=Granulicatella RepID=C8NEF3_9LACT Length = 236 Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/224 (36%), Positives = 131/224 (58%), Gaps = 13/224 (5%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 L+ K +FN++ LL +A+TH S +++H NER+EFLGD++L I++ L+ +FP Sbjct: 11 LKEKFDISFNNEALLMEAMTHSSYANEHKEMKGIYNERIEFLGDAVLELTISDWLFRQFP 70 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG ++++RA +V ++L+ LA+E L E L LG GE SGG + +IL D EA IG Sbjct: 71 HFQEGQLTKLRAQIVCEDSLSLLAKECSLNEYLLLGKGETLSGGREKPAILCDVFEAFIG 130 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQ--KDPKTRLQEYLQGRHLPLPTYLVVQV 179 ++LD + V++ LN + +I G + D KT LQEYLQ Y +V+ Sbjct: 131 ALYLDKGVNEVQRF-LNL--VVIPKIKNGRYELITDFKTELQEYLQQNGPVHIRYELVKE 187 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G +HD+ FT+ V G + +G +++ AEQ AA+ +++L Sbjct: 188 EGPSHDKTFTVQLIVDG-KKYKTASGKTKKAAEQMAAKLTMEEL 230 >UniRef50_C4FT63 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT63_9FIRM Length = 247 Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 126/220 (57%), Gaps = 9/220 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALY 57 I ++++L TF EL+QQA H S +++ H ERLEFLGD++L + + LY Sbjct: 6 TIRVIEKQLNLTFKKPELIQQAFRHTSYANEQARRHLPHYERLEFLGDAVLELLSSEFLY 65 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 H +P + EG ++RMRA +V+ +LA LAR+ + + L+LG GE SGG R+SILAD E Sbjct: 66 HSYPNLPEGKLTRMRAQIVQEKSLAYLARQLKFNQFLQLGKGEELSGGRERDSILADCFE 125 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A++G ++ D ++ V K LN ++ G +D KT QE +Q + Y + Sbjct: 126 AVLGAIYEDQGLE-VAKDYLNRVMFSQHQLLLGRVTQDHKTLFQERVQKQGTVQIDYRLK 184 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 +G AHDQ FT+ V+ G GSS+++AE AAE Sbjct: 185 DKQGPAHDQIFTVELYVND-QHIATGQGSSKKQAEMQAAE 223 >UniRef50_A3EU88 Ribonuclease III n=2 Tax=Leptospirillum sp. Group II RepID=A3EU88_9BACT Length = 247 Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 130/228 (57%), Gaps = 13/228 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS--------ASSKHNERLEFLGDSILSYVIANALY 57 ++ L+ +L Y F +LL++A TH+S +++NERLEFLGD++L V+A L Sbjct: 7 LSELEDRLRYRFRKIDLLEEATTHKSFMNEGRRLGVTRNNERLEFLGDTVLGLVVAEYLM 66 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +P+ EG +S+ + +V TLA ++R +G L +G GE + G + S+LAD +E Sbjct: 67 VTYPKYPEGILSKFKGRVVSEPTLASVSRALGIGGFLLIGKGEELTQGREKSSLLADAME 126 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+I ++LDS + I+ +++ +++ D +D KT LQEY Q LP Y V+ Sbjct: 127 AVIAAIYLDSGLDAARTFIIGHFRSVIEQTVHEDSIQDYKTDLQEYCQRELETLPVYQVM 186 Query: 178 QVRGEAHDQEFTIHCQVSG--LSEPVVGTGSSRRKAEQAAAEQALKKL 223 RG H +EF + + G E G+G S+++AEQ AA+ AL +L Sbjct: 187 DQRGPDHQKEFDVAVLIRGKIYGE---GSGKSKKEAEQKAAKDALSRL 231 >UniRef50_C9L8J0 Ribonuclease III n=4 Tax=Clostridiales RepID=C9L8J0_RUMHA Length = 263 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 130/222 (58%), Gaps = 11/222 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 L++K+GY F + +LL ALTH S +++H NERLEFLGD++L + L++++ Sbjct: 37 LEKKIGYEFENFDLLVNALTHSSYANEHHIAYKENNERLEFLGDAVLELTSSEFLFYQYA 96 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG +++ RA++V TLA A+E LG+ L LG GE +GG R SI++D +EALIG Sbjct: 97 DLPEGKLTKKRASIVCEPTLALCAKEISLGDYLLLGKGEEATGGRNRNSIISDAMEALIG 156 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD ++ + + L++I D KT LQE +Q ++ Y++V+ G Sbjct: 157 AIYLDGGFANAKEFVHKYI---LNDIENKQLFYDSKTTLQEIVQAQYEDDVKYVLVKEEG 213 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H++ F + + G + G G +++ AEQ AA A+KKL Sbjct: 214 PDHNKSFYVEALL-GDKKLGEGCGHTKKAAEQQAAYCAIKKL 254 >UniRef50_C6XJG5 Ribonuclease III n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJG5_HIRBI Length = 255 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 120/220 (54%), Gaps = 8/220 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSA-----SSKHNERLEFLGDSILSYVIANALYHRFPRV 63 +Q G F LL +A TH SA + NERLEFLGD +L V A+ L RF + Sbjct: 35 IQEIAGIKFKDVSLLDRAFTHTSAVPGEAADWSNERLEFLGDRVLGLVAASQLITRFEKE 94 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG ++ LV +T A++A E LG+ L L E +GG + S+LA+ EALIG + Sbjct: 95 REGGLAPRLNALVSRDTCAKIAAEINLGQYLILDASESSAGGTTKPSLLANVTEALIGAI 154 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 +LD+ + E+ I+ +++ ++ D +DPK+ LQE+ QG P P Y + G Sbjct: 155 YLDAGLAASERFIVKYWKEYFKTLT--DVPRDPKSALQEWAQGDGRPAPNYENIDRTGPD 212 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H FT+ +V G+ P G GSS+++A++AAA L + Sbjct: 213 HAPVFTVEVRVEGV-RPAKGEGSSKQEAQRAAASAMLNNV 251 >UniRef50_B0S1M6 Ribonuclease III n=2 Tax=Finegoldia magna RepID=B0S1M6_FINM2 Length = 238 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/228 (36%), Positives = 129/228 (56%), Gaps = 13/228 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 ++ L+ KL Y F LL A H S +++ NERLEFLGDS+L V+++ LY+ Sbjct: 9 LHELEEKLDYRFTDINLLNLAFFHSSYGNENKAYKNISNERLEFLGDSVLDLVVSDFLYN 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 + EG M+++R+ +V + + +A+ ELG+ L +G GE SGG + S+LADT EA Sbjct: 69 SKSSLKEGAMTKIRSQMVCEKSFSNMAKYLELGKYLMMGHGEFISGGSEKPSVLADTFEA 128 Query: 119 LIGGVFLDSDIQTVEKLILNWYQT-RLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 + G ++LDS ++ K++ N +++ + EI D KT LQE Q + Y +V Sbjct: 129 VFGAIYLDSGYESAFKIVENKFKSLFIAEIETKSSFIDYKTMLQENNQKKSRDKLKYKIV 188 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGT--GSSRRKAEQAAAEQALKKL 223 + G HD++F + L V+G+ GSS++ AEQ AA AL KL Sbjct: 189 KEEGPDHDKKFYVDVYEGNL---VIGSGFGSSKKHAEQDAARNALIKL 233 >UniRef50_Q1Q4S0 Similar to ribonuclease III n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4S0_9BACT Length = 236 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/225 (35%), Positives = 129/225 (57%), Gaps = 5/225 (2%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN---ERLEFLGDSILSYVIANALYH 58 NP Q +GY+F LL++ALTH S ++N ERLEFLGD++L +I++ LY Sbjct: 9 NPEKFIACQNIIGYSFKKMLLLEKALTHTSCRVENNFSNERLEFLGDAVLGMIISDYLYK 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P EG+++ +++ +V +TLA++ E L E L +G G L +S+LA+ EA Sbjct: 69 TMPHYSEGELTNVKSVVVSQSTLAKVGMEAGLKEFLLVGRG-LNDRDLFPKSLLANVFEA 127 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LI +++D I+ + L + + +D + +K+ K+ LQ+Y Q + PTY ++Q Sbjct: 128 LIAAIYIDGGIEAASEFTLRYLKKEIDLVCKNQHKKNYKSILQQYSQKEYGITPTYRLLQ 187 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F I + G SE G G S+++AEQ+AA++ALK L Sbjct: 188 QIGPDHGKSFEIVVSIKG-SEYGRGWGKSKKEAEQSAAKEALKIL 231 >UniRef50_Q1NXA7 Ribonuclease III n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NXA7_9DELT Length = 233 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 111/204 (54%), Gaps = 10/204 (4%) Query: 13 LGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEG 66 +GY F LL+ AL H S +++ NERLEFLGD++L +A LY P + EG Sbjct: 15 MGYRFKRTSLLELALVHSSRAAEAGKGVSSNERLEFLGDAVLGLAVAALLYEAHPTMPEG 74 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 D+SR RA LV LA +AR+ LGE +RLG GE +GG + SILA T EAL+G V+LD Sbjct: 75 DLSRHRAALVNEEHLAGMARQLALGEFIRLGRGEEATGGRDKPSILAATFEALVGAVYLD 134 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + L+ + + P + D K+ LQE LQ RH P Y + G HD+ Sbjct: 135 GGYEPALALLRPLFAPWVAN-PPLPRISDSKSALQEVLQQRHGEGPVYYLENEEGPDHDK 193 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRK 210 FT+ ++ G V+G G R K Sbjct: 194 RFTVRVELQG---KVLGRGRGRGK 214 >UniRef50_B3DV16 Ribonuclease III n=2 Tax=Verrucomicrobia RepID=B3DV16_METI4 Length = 247 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 83/238 (34%), Positives = 129/238 (54%), Gaps = 30/238 (12%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYH 58 + L++K+GY F + +LL++ALTH S + +RLEFLGD++L + L+ Sbjct: 3 LEELEKKMGYAFKNPQLLEEALTHPSFFVESIRVNKGDFQRLEFLGDAVLGLAVTEKLFQ 62 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 FP DEG ++++RA LV L LA E+G+ LRLG GE K+ G + S LA+ +E+ Sbjct: 63 LFPSFDEGKLTKLRARLVSRKNLCSLASLLEIGKYLRLGKGEEKNQGRTKPSNLANALES 122 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDP---------KTRLQEYLQGRHL 169 +IG ++LD + I + E+ +KDP K LQE+LQ + Sbjct: 123 VIGALYLDGGWDRAKSFIFELFNPLFMEL-----EKDPMRFVEHENSKGLLQEFLQKKGT 177 Query: 170 PLPTYLVVQVRGEAHDQEFTIHC----QVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 LP Y +V GEAH++ + + QV G G+G S+++AE AA++A +KL Sbjct: 178 ELPIYRIVLESGEAHNKWYEVEVSWKNQVLG-----KGSGKSKKEAELRAAKEAFEKL 230 >UniRef50_Q67PF5 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_SYMTH Length = 235 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 85/215 (39%), Positives = 125/215 (58%), Gaps = 11/215 (5%) Query: 13 LGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGD 67 LGY F + LL +ALTH + +++H NERLEFLGDS+L VIA LY R+P + EG+ Sbjct: 18 LGYEFRDESLLLEALTHTTYANEHPRARANERLEFLGDSVLGMVIAAHLYERYPDLPEGE 77 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS 127 ++++RA +V +LAE AR +G +R G GE S G R+S L+D EA++G ++LD Sbjct: 78 LTKIRAAVVCEPSLAERARVLGIGRHMRFGRGEAVS-GRDRDSTLSDAFEAVVGALYLDG 136 Query: 128 DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 ++ ++ +L ++ G + D KT+LQE LQ + P Y ++ G AH + Sbjct: 137 GLEAAQRFVLRELGQLVEAARQGLVRVDYKTQLQEQLQRQGAAAPQYRLLVEEGPAHLRR 196 Query: 188 FTIHCQVSGLSEPVVGTGSSRRK--AEQAAAEQAL 220 F + G ++GTG R K AEQ AA QAL Sbjct: 197 FQVGVYFEG---RLLGTGWGRNKKEAEQEAARQAL 228 >UniRef50_B0PD50 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD50_9FIRM Length = 232 Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 84/223 (37%), Positives = 132/223 (59%), Gaps = 17/223 (7%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPR 62 L+ ++GYTF + L ALTH S +++ NER EFLGD++LS V+++ L+H + Sbjct: 13 LEGRIGYTFQNGRYLDIALTHSSYANEVKKNISSNERQEFLGDAVLSIVVSDYLFHTY-H 71 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EGD++++RA LV +L E ++ LG+ L+LG GE GG R SILAD EALI Sbjct: 72 LAEGDLTKLRAALVCEKSLWEFSQALGLGDFLKLGRGEEMMGGRTRPSILADAFEALIAA 131 Query: 123 VFLDSDIQTVEKLILNWYQTRL---DEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 ++LD I+ + +L + L D+++ D KT LQE +Q +Y++V Sbjct: 132 IYLDGGIEPARRFVLGYIVDALENRDDLAF----SDYKTMLQEIIQKNPEERLSYVLVNE 187 Query: 180 RGEAHDQEFTIHCQVSGLSEPV-VGTGSSRRKAEQAAAEQALK 221 G H+++F + +++ S + VG G S++ AEQAAA +ALK Sbjct: 188 SGPDHNKKFLVEVRLN--SNVIGVGCGGSKKSAEQAAAREALK 228 >UniRef50_A0YTE9 Ribonuclease III n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YTE9_9CYAN Length = 395 Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 131/221 (59%), Gaps = 13/221 (5%) Query: 17 FNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP-RVDEGDM 68 F LLQ+ALTHR+ +H NE+LEFLGDS+L+++ + LY ++ R DEG++ Sbjct: 175 FQDARLLQRALTHRTYVFEHPTKTEGDNEQLEFLGDSVLNFLAGDYLYEQYSHRRDEGEL 234 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD 128 +R R++ V + A+ A + LGE ++LG GE GG + S+L++T EA++G +LDS Sbjct: 235 TRRRSSFVDNSQFAQFAVKLNLGEWMQLGKGEELQGGRTKSSLLSNTFEAVMGAYYLDSG 294 Query: 129 IQTVEKLILNWYQT----RLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 I+ V +LI ++++ +++ P D K RLQ Q LP+P Y VV G+ H Sbjct: 295 IEAVRELIKPFFESVDTATVEDSIPQQTLIDVKGRLQNLAQTNDLPIPEYYVVSEMGKDH 354 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 + FT+ +++ GTG+ +++AE+ AA AL+ L L Sbjct: 355 AKIFTVEVRINRKFYG-RGTGNKKKEAEKQAAIDALQCLGL 394 >UniRef50_Q1JXG8 Ribonuclease III n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXG8_DESAC Length = 244 Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 8/198 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 +++ + +LGY F + LQ AL H+S +++ NER EFLGD++L V+A+ L+ Sbjct: 13 LSQFEERLGYRFTDRHYLQTALIHKSYANEQLRDPAACNERQEFLGDAVLDLVMADYLFC 72 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +P++ EG++SR+R+ LV LA++AR LG CL+LG GE +SGG ++++LAD +EA Sbjct: 73 TYPQLPEGELSRIRSELVSARALAKVARRLNLGPCLKLGRGERRSGGQDKDNLLADALEA 132 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 + G VFLD+ ++ ++ + + K D KTR QE Q R P Y +V Sbjct: 133 VFGAVFLDAGWDVARDVLGRMFEGTAVQAAR-RKSLDYKTRFQELAQARFGAAPEYELVA 191 Query: 179 VRGEAHDQEFTIHCQVSG 196 G H +E+T+ G Sbjct: 192 TEGPDHQREYTVIVSCEG 209 >UniRef50_C3RKG6 Ribonuclease III n=5 Tax=Bacteria RepID=C3RKG6_9MOLU Length = 226 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 132/221 (59%), Gaps = 12/221 (5%) Query: 11 RKLGYTFNHQELLQQALTHRSASSKHN------ERLEFLGDSILSYVIANALYHRFPRVD 64 +K+ + + E+ ++A TH S ++++ ERLEFLGD++L Y ++ ++ +P + Sbjct: 8 QKMEIPYQNIEIFKEAFTHPSYANENKMKNHDYERLEFLGDAVLQYHVSRHIFDLYPELP 67 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG ++++RA LVR +LA ARE +LG + LG GEL +GG R+S+LAD EA +G + Sbjct: 68 EGRLTKLRAKLVREESLARFARELDLGPLIYLGAGELNNGGRDRDSVLADIFEAFMGAIC 127 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 D + VEK++ +++++ D+ D KT+LQE +Q TY ++ G ++ Sbjct: 128 HDCGPEYVEKMLDITIYKHVEDVN-YDEITDFKTKLQELIQADQRKTVTYDLISSSGPSN 186 Query: 185 DQEFTIHCQVSGLSEPV--VGTGSSRRKAEQAAAEQALKKL 223 + F + + + E V VG GSS+++AEQ AA+ AL KL Sbjct: 187 NPVFEMAVK---MDEMVLGVGVGSSKKRAEQQAAKDALNKL 224 >UniRef50_B9M911 Ribonuclease III n=1 Tax=Geobacter sp. FRC-32 RepID=B9M911_GEOSF Length = 238 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/228 (35%), Positives = 132/228 (57%), Gaps = 12/228 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS-------KHNERLEFLGDSILSYVIANALYH 58 I L++ + Y F + LL +ALTH S + + N+RLEFLGD+++ V+++ L+ Sbjct: 9 IAALEKLINYDFTDKSLLVEALTHPSFVNESGGKVRQDNQRLEFLGDAVVGLVLSHDLFS 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP EG+++++RA+LV +LA LAR +LG L+LG GE +SGG + S+LAD EA Sbjct: 69 RFPDSREGELTKLRASLVDEASLAILARAIDLGAHLKLGRGEERSGGRTKPSLLADAYEA 128 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+ V+LD I+ +I + + + +++ + +D KT QE P YL+ Sbjct: 129 LLAAVYLDGGIEPAAAIIKSHFASFMEKRNIRTSGRDFKTEFQELAHRLRSLAPRYLLQG 188 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTG--SSRRKAEQAAAEQALKKLE 224 V G H + F++ + E +G G S+++AEQAAAEQ + L+ Sbjct: 189 VSGPDHQRIFSVAVFI---GEEFMGEGLAKSKKEAEQAAAEQGIAFLK 233 >UniRef50_A5V230 Ribonuclease 3 n=2 Tax=Roseiflexus RepID=RNC_ROSS1 Length = 237 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 12/214 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH---------NERLEFLGDSILSYVIANAL 56 ++ L +LG TF+ Q LL+QALTH S ++H NERLEFLGD+I++++ A + Sbjct: 5 VDELSARLGVTFSDQRLLEQALTHSSFLNEHVEERMHLDSNERLEFLGDAIINFLAARLV 64 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + RFP EG+++ R L+R TLA A+ + LG + L GE SG +R+++LADT Sbjct: 65 FERFPDAGEGELTAWRTALIRTETLAGFAQRYNLGAYVLLARGEESSGARQRQALLADTF 124 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+I +FLD + V +L ++ L + D K+RLQ +Q P Y Sbjct: 125 EAVIAALFLDQGLNAVRTFLLPLFEAELASLPDRTLPVDYKSRLQARIQAERRVTPRYHE 184 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 + G H EFT+ + E +GTG K Sbjct: 185 IDRSGPEHRPEFTVEVRA---GEERLGTGKGPSK 215 >UniRef50_C2KW20 Ribonuclease III n=1 Tax=Oribacterium sinus F0268 RepID=C2KW20_9FIRM Length = 241 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/230 (38%), Positives = 137/230 (59%), Gaps = 16/230 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYH 58 +++L+ LGY F Q+LL ALTH S S++ N+RLEFLGD++L V + LYH Sbjct: 11 LSKLEEDLGYHFQDQKLLLHALTHPSYSNEMGHPKEASNQRLEFLGDAVLELVSSTLLYH 70 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 + P + EG M+++RA LV + LA +A+ +L L LG GE + G R+S+L+D +EA Sbjct: 71 KKPVIQEGRMTKLRAALVCESALAVVAKSLQLSSYLLLGKGEEREGIQFRDSVLSDALEA 130 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +IG ++LD ++ E + L +I +D KT LQEY + PL Y +++ Sbjct: 131 VIGAIYLDGGMKKAECFVRG---KVLSDIEHKTLFQDAKTMLQEYCTAKRYPLE-YDLLE 186 Query: 179 VRGEAHDQEFTIHCQVSGLSEPV--VGTGSSRRKAEQAAAEQALKKLELE 226 G H + + + +V +E V +G GSS++KAEQAAA AL+K+++E Sbjct: 187 ESGPFHQRFYKVSVKV---NEEVYGIGEGSSKKKAEQAAAYFALEKIKVE 233 >UniRef50_C4V2U1 Ribonuclease III n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2U1_9FIRM Length = 238 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 115/212 (54%), Gaps = 7/212 (3%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFP 61 RL L F LL++ALTH S ++ HNERLEFLGD++L I+ LY +P Sbjct: 15 RLSAFLDVDFADLSLLEEALTHPSYVNEARERATHNERLEFLGDAVLELAISTYLYVAYP 74 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG++++MRA+LV+ TLA LAR LG LR+G GE+ GG R++ L + EA+IG Sbjct: 75 HCSEGELTKMRASLVQSETLARLARRLHLGAHLRMGRGEMLGGGAERQNNLENVFEAVIG 134 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+LD + + + + +D KT LQEY+QG Y V G Sbjct: 135 AVYLDRGWDAAYSYVQRQFTEEVTRLRQEHAVQDYKTMLQEYVQGHRHECIAYEQVAESG 194 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 HD+ FT+ ++ G+ G G S+++AEQ Sbjct: 195 PDHDKRFTMRVRI-GMEVLGEGIGRSKKEAEQ 225 >UniRef50_A6DSV3 Ribonuclease III n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSV3_9BACT Length = 232 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 11/231 (4%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSAS--SKH----NERLEFLGDSILSYVIANALY 57 I L+ L FN LL++ALTHRS SK N+RLEFLGD+++ +++ L+ Sbjct: 3 ISFKVLEDNLKCKFNQPTLLREALTHRSYKFESKEPLNDNQRLEFLGDAVIELIVSRYLF 62 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 R+P EGD+++ RA LV+ + L E A+ +LG+ L LG ELKS G R S L+D E Sbjct: 63 DRYPDAPEGDLTKYRAALVKESALFECAKSIKLGKYLLLGKSELKSQGNERPSNLSDAYE 122 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 AL+ ++LD +T + +N + DE + ++PK LQE Q H P Y+ + Sbjct: 123 ALMAAIYLDQGYETAQSFHINILEKLWDEPADLLLVQNPKGTLQELTQKNHGSPPKYITI 182 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVV--GTGSSRRKAEQAAAEQALKKLELE 226 G HD + + C L++ ++ G G + + A++ AA +A+ L+ E Sbjct: 183 SKTGPEHDPLYKVECI---LNKELISKGQGKTLKAAQENAARKAIHCLKEE 230 >UniRef50_Q3ZXY9 Ribonuclease 3 n=5 Tax=Dehalococcoides RepID=RNC_DEHSC Length = 237 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 124/228 (54%), Gaps = 12/228 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANALYH 58 + L+ LG F LL+QAL H S SS NER+EFLGD++L + A+ LYH Sbjct: 4 LTELENSLGVKFEQPSLLEQALIHTSWVNENPNHSSGSNERMEFLGDAVLGVIFADRLYH 63 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 FP + EGD++R R+ LVR +L +A LG+ L LG GE S G + + LA EA Sbjct: 64 DFPDIQEGDLTRFRSLLVRRESLVRVALGINLGKYLYLGRGEDVSKGRFKPANLAGAFEA 123 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++ +++D + ++I ++T ++ + D K+RLQE +Q + P Y + Sbjct: 124 VLAAIYIDKGMDVTREVIFRLFKTEMERVQTLSSNIDYKSRLQELIQAQLQLTPRYRITN 183 Query: 179 VRGEAHDQEFT--IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H++ F ++ + +E G+G S+++AE AA+ AL++ E Sbjct: 184 FSGPEHNRLFIAEVYAEDRVFAE---GSGRSKKEAETNAAKVALQQFE 228 >UniRef50_A4XJW5 Ribonuclease III n=2 Tax=Clostridia RepID=A4XJW5_CALS8 Length = 224 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 127/218 (58%), Gaps = 5/218 (2%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHN---ERLEFLGDSILSYVIANALYHRFPRVDE 65 +++KLGY F + LL+ ALTH+SA+ ERLEFLGD++L V++ L+ FP++ E Sbjct: 4 IEKKLGYRFKNPNLLKLALTHKSATHDDKSCYERLEFLGDAVLELVVSKYLFEHFPQLSE 63 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G+++ +RAT+V TL+++A L + G E K G +SI +D +EA+ GG+FL Sbjct: 64 GELTNLRATIVCSETLSKVAETLNLKRYIVFGKNEKKEGFEGNKSIWSDVLEAIFGGIFL 123 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 +S EK+++N + + + + G D KT+LQE++Q R + + E + Sbjct: 124 ESGFDMAEKIVINLLEPFIKKAAEGKLFYDYKTKLQEFIQ-REKNVKIKYIDYENFEDNL 182 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 F + G ++ G G+S+++A+Q AA ALKKL Sbjct: 183 SRFKSELYI-GKNKISEGYGNSKKEAQQEAALNALKKL 219 >UniRef50_A4GK15 Ribonuclease III n=1 Tax=uncultured marine bacterium HF130_81H07 RepID=A4GK15_9BACT Length = 220 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 127/216 (58%), Gaps = 7/216 (3%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGD 67 +L++ LGY+F +E L +ALTH S S ++NE EFLGDS+L+ +I+ L +F DEG Sbjct: 7 KLEKNLGYSFQKKETLVKALTHVSKSKENNEVFEFLGDSVLNLIISQILVEKFSMDDEGT 66 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS 127 +S MR+ LV TL ++A++ EL + G+ +G E+IL +++EA+ G V+ +S Sbjct: 67 LSLMRSKLVSRTTLNKIAKKLELDSFIV--KGDSLAGQETPENILGNSLEAIFGAVYKES 124 Query: 128 DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 ++ ++K+I + ++ + G+ K+ KT LQEY Q LPTY Q+ + + Sbjct: 125 GLEFIQKIIETTFAKEIELLREGN-LKNSKTLLQEYCQKNKFSLPTY--NQIEKKENIYP 181 Query: 188 FTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 F + C++ S G G S + AEQ AA + LKK+ Sbjct: 182 FIVTCKLDDSSSE--GFGKSLKLAEQDAAARLLKKI 215 >UniRef50_Q027L3 Ribonuclease 3 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RNC_SOLUE Length = 271 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/236 (36%), Positives = 126/236 (53%), Gaps = 25/236 (10%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH------------NERLEFLGDSILSYVIANAL 56 L+ KL Y FN ELL++ALTH S ++++ NE+LEFLGDS+L ++IA AL Sbjct: 8 LELKLDYRFNDPELLRRALTHSSLANENRPGAGVGSPLNDNEQLEFLGDSVLGFLIAEAL 67 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 RFP EGD+SR++A LV L +AR +LG L LG E SGG ++++L D + Sbjct: 68 VRRFPEYHEGDLSRLKAHLVSAAHLHGVARRLDLGSYLELGRSEEMSGGRTKKTLLVDGL 127 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQK---------DPKTRLQEYLQGR 167 EA++ ++LD + + LD GD++ + K+ LQE Q R Sbjct: 128 EAIMAAIYLDGGVDAARAFVATHV---LDAPFFGDEEAGTDIQPAITNFKSALQELAQTR 184 Query: 168 HLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 LP P Y VV+ RG H + FT+ +V G G +++ A Q AA ++L Sbjct: 185 RLPQPRYSVVRERGPEHSKTFTVEVRV-GKEWTAQAEGRTKKIAAQRAARGLYERL 239 >UniRef50_A6LNE7 Ribonuclease III n=2 Tax=Thermosipho RepID=A6LNE7_THEM4 Length = 231 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 132/220 (60%), Gaps = 12/220 (5%) Query: 13 LGYTFNHQELLQQALTHRSASSKHN----ERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 +GY F ++ELL ALTH S ++++ ERLEFLGDS++ ++ LY ++ ++EG M Sbjct: 13 IGYRFRNKELLFTALTHTSYANENKKQSYERLEFLGDSVIDILVCTILYEQYQTLNEGTM 72 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS- 127 +++++ + + L E+A++F LG+ + LG GE +S G ++SILAD VE+LI ++LDS Sbjct: 73 AQIKSAVTSEDILFEIAKKFNLGKYILLGKGERRSRGSEKKSILADVVESLIAAIYLDSN 132 Query: 128 -DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 +++ +E L ++ +D G + D KT+LQE Q + LP Y V G+ Sbjct: 133 KNLKLIENLFSKIFKDYIDIFLTGKRIFDYKTKLQELTQDKFKQLPVYETTTVGGK-FIT 191 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 I+ ++ ++ GSS++ AE+ AA+ A +KL+ E Sbjct: 192 TLKINNKIYSKAK-----GSSKKDAEKLAAKIAYEKLKEE 226 >UniRef50_C9LMI7 Ribonuclease III n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMI7_9FIRM Length = 249 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/225 (35%), Positives = 124/225 (55%), Gaps = 8/225 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 + R ++ ++ ELL ALTH S +++H NERLEFLGD++L + + L+ Sbjct: 15 VWRFAKESDIPVHNMELLNVALTHTSYANEHRNLKVHDNERLEFLGDAVLDLAVGDYLFR 74 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP EGD++R +A++V AE A F +G+ + LG GE SGG R SIL + E+ Sbjct: 75 RFPEWPEGDLTRAKASVVCKPACAECAANFHVGDYMLLGRGEEMSGGRTRVSILGNAFES 134 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +IG V+LD+ + K IL Q LD + G D K+ LQE Q Y VV+ Sbjct: 135 VIGAVYLDNGYEVAAKFILGHMQKFLDLVDQGIYDHDYKSDLQEIAQKNGDVDIRYEVVR 194 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G HD+ + ++G + G G ++++A Q AA++A+++L Sbjct: 195 DEGPDHDKTIWMELFINGKALG-TGIGKNKKEAAQNAAKEAIERL 238 >UniRef50_B0TGW4 Ribonuclease 3 n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=RNC_HELMI Length = 235 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 122/224 (54%), Gaps = 15/224 (6%) Query: 9 LQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYHRFP 61 L R++G L+ ALTH S A +HN+RLEFLGD++L VI L+ R+P Sbjct: 11 LARRIGIASEDLATLEMALTHPSFVYENPQAPPEHNQRLEFLGDAVLGLVIGEQLFVRYP 70 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG++SR RA +V LA+ AR +LG L+LG GE SGG + SILAD +EA+IG Sbjct: 71 TWTEGELSRRRAAVVCEANLADGARRLQLGAWLKLGRGEEASGGREKPSILADALEAVIG 130 Query: 122 GVFLDSDIQTVEKLILNWYQTRL---DEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +FL I+ + I++ + L + GD KT QE++Q Y +V Sbjct: 131 AIFLSGGIEAARRFIVDLFGDALANAQNLVSGDN----KTAFQEWVQRTGPADIRYCIVD 186 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G HD+ F V+G + G G ++++AEQ AA +A+++ Sbjct: 187 ESGPDHDKRFVAAVMVNG-TVIADGQGRTKKEAEQQAAGRAMRE 229 >UniRef50_D0MGH0 Ribonuclease III n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGH0_RHOM4 Length = 260 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 8/210 (3%) Query: 22 LLQQALTHRSA------SSKH-NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 L +QALTHRS S H NERLEFLGD++L +V+A LY FP +EG ++R+RA Sbjct: 42 LYEQALTHRSVLRGQPDSHLHSNERLEFLGDAVLGFVVAAYLYEHFPDRNEGFLTRLRAK 101 Query: 75 LVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEK 134 LV LA+ AR LG +RL ++GG +SIL+D EAL+G ++LD ++ Sbjct: 102 LVNREALAQAARRLGLGAHVRLSENMERAGGRDNDSILSDAFEALVGAIYLDLGLEAARA 161 Query: 135 LILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQV 194 + LD + + + K+ L E+ Q R P P Y VV G +H + FT+ + Sbjct: 162 FVERALLAPLDLEALARRPDNYKSLLLEFAQARGWPQPRYRVVAEEGPSHARTFTVEAWI 221 Query: 195 SGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G GT S+++AEQ AA +AL +L+ Sbjct: 222 -GNRRLGRGTAGSKKQAEQQAAREALARLQ 250 >UniRef50_D1N9T0 Ribonuclease III n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9T0_9BACT Length = 232 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 9/224 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRF 60 I L+++LG+ L +A+THRS + ++N +RLEFLGD++L ++ L+H + Sbjct: 5 IEELKKRLGFAGPWSNRLAEAVTHRSYAVENNLGYDNQRLEFLGDAVLEIILTEYLFHLY 64 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG+M+++R+ LVR LA LAR FELGE L G GE SGG R+S LAD EA++ Sbjct: 65 PDAAEGEMTKIRSALVREPALARLARRFELGEYLLTGRGEHDSGGADRDSTLADLFEAVL 124 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL-PTYLVVQV 179 G +LD+ + + + + +PK +LQEY Q RH L P Y ++ Sbjct: 125 GAFYLDAGFDATRQFVTGLIRDEYPDPRSLLTSINPKGQLQEYSQ-RHWGLTPKYSILHT 183 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + + ++S + VG ++R+ AE AA Q + L Sbjct: 184 SGPEHLPVYEVEVRLSRYN--AVGRAANRKAAEGDAARQLYRYL 225 >UniRef50_D0LWB5 Ribonuclease III n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWB5_HALO1 Length = 282 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 8/218 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANA 55 + I ++ L+ LG+ F + LL+ A+THRS +++ NERLEFLGD++L + + Sbjct: 41 HAIDLSGLEDILGHRFRKRALLEAAVTHRSFANEQAVPCTDNERLEFLGDAVLDLAVGHM 100 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L P + EG +S RA +V L+E+A LG LRLG GE +SGG + SILAD+ Sbjct: 101 LMDVHPDLSEGRLSVTRAQIVSEKGLSEIAYGLGLGTYLRLGKGERRSGGQNKASILADS 160 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EA+I V+LD KL+ + L+E+ D KTRLQE Q R P Y Sbjct: 161 LEAVIAAVYLDGGFDAAWKLVARLFARTLEEVEISGFY-DHKTRLQELAQARLKSTPAYR 219 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 VV G H + F + ++ G E GSS+++AEQ Sbjct: 220 VVDETGPDHAKLFEVVAEIDG-REWGRAIGSSKKRAEQ 256 >UniRef50_B9E1G8 Ribonuclease 3 n=35 Tax=Clostridium RepID=RNC_CLOK1 Length = 244 Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 134/224 (59%), Gaps = 8/224 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASS-----KHNERLEFLGDSILSYVIANALYHRFPRV 63 +++ L +FN +EL+ ALTH S ++ K NER+EFLGDS+L I+ L+ + Sbjct: 10 VEKTLNISFNDKELIDTALTHSSYANGKKGVKFNERMEFLGDSVLQLCISEYLFLIYKSK 69 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG++++ R+ +V N+L E+A+++ +G+ +++ GE +GG R SILA+ VEA+I + Sbjct: 70 SEGELTKKRSLIVCENSLYEVAKKWNIGKYIKMSKGEEITGGRERTSILANCVEAIIAAI 129 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 ++DS + ++ I++ ++ +++ D KT LQE +Q Y++++ G Sbjct: 130 YIDSGYKKTKQFIIDNFKDIIEKAIKNQIVLDYKTNLQEIVQQDGDIHIEYMLIKYEGPP 189 Query: 184 HDQEF-TIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H ++F T C + + G G +++++EQ AA+ ALKKL+ E Sbjct: 190 HRRKFYTKVCVANNVMGS--GVGYTKKESEQNAAQDALKKLKSE 231 >UniRef50_B3E2K4 Ribonuclease III n=1 Tax=Geobacter lovleyi SZ RepID=B3E2K4_GEOLS Length = 228 Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 11/206 (5%) Query: 13 LGYTFNHQELLQQALTH-------RSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 LG++F +Q LLQQALTH R + +RLEFLGD++L +++A+ L FP + E Sbjct: 9 LGHSFINQRLLQQALTHPSYLNEARQEGAADYQRLEFLGDAVLGFLLADLLCQHFPALPE 68 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 GD+SR+R++LV LA LA + + + +G G + GG SILAD EAL+G + Sbjct: 69 GDLSRLRSSLVDQPRLARLAVDAGIPPLILMGKGAEREGGRTNPSILADVFEALLGAIHC 128 Query: 126 DSDIQTVEKLILNWYQTRLDEISPG-DKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 D+ V++++ + Y ++ I+ G D K+ LQE L R P Y +V +G H Sbjct: 129 DAGFAAVQQVVKHIYAPLVNAIAAGTPAHHDAKSELQELLAARKQAAPVYNLVDQQGPDH 188 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRK 210 D+ F I V G+ +G G R K Sbjct: 189 DRLFCIEVSVDGMP---LGQGQGRSK 211 >UniRef50_A4WVP5 Ribonuclease 3 n=44 Tax=Rhodobacterales RepID=RNC_RHOS5 Length = 229 Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 6/208 (2%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPRVDE 65 + ++G+ F + L +A+TH S SS N+RLEFLGD +L V+A AL E Sbjct: 10 FESRIGHAFREPDRLLRAVTHASLSSATRPDNQRLEFLGDRVLGLVMAEALLAADKAATE 69 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G ++ LVR T A +ARE LG+ L+LG E+ SGG R+E++L D +EA+I V+L Sbjct: 70 GQLAPRFNALVRKETCAAVAREVGLGDVLKLGRSEMMSGGRRKEALLGDALEAVIAAVYL 129 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ + +L+L + R+ ++ +D KT LQE+ Q R LP P Y V G H Sbjct: 130 DAGFEAARRLVLRLWGERIAQVEA--DARDAKTALQEWAQARGLPPPCYEAVDRSGPDHA 187 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 FT+ ++ G E ++R AEQ Sbjct: 188 PIFTVEVRL-GNGETERSAAGTKRVAEQ 214 >UniRef50_D0WNC5 Ribonuclease III n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNC5_9ACTO Length = 228 Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 5/209 (2%) Query: 22 LLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVR 77 LL+ ALTHRS + +H NERLEFLGDS+L ++ A+ ++ FP EGDMSRM+ V Sbjct: 18 LLRLALTHRSFAFEHDEPHNERLEFLGDSVLGFITADKVFREFPDSREGDMSRMKTFAVS 77 Query: 78 GNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLIL 137 LA +ARE ELG +RLG GE SGG ++SIL+DTVEALI +L + K++ Sbjct: 78 EKALASIARELELGRFIRLGRGEDLSGGRDKDSILSDTVEALIAATYLQHGLDVARKIVE 137 Query: 138 NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL 197 ++++ S D +T +E R + + G H + +T + G Sbjct: 138 RLVAAKIEDASLLGPNLDWQTSFEEVAHERGMVGSLQFELTSEGPDHQRVYTAVASMGGR 197 Query: 198 SEPVVGTGSSRRKAEQAAAEQALKKLELE 226 GTGSS++ A QAAA+ A + + E Sbjct: 198 VWG-EGTGSSKKTARQAAAQVAYRTITAE 225 >UniRef50_C7GYL4 Ribonuclease III n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYL4_9FIRM Length = 252 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 127/223 (56%), Gaps = 15/223 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANALY 57 ++ L+ K+ Y F+ + LL ALTH S K N+RLE+LGD+IL VI L+ Sbjct: 4 LDALETKINYKFSDRNLLITALTHVSMLGKVHNMDRKSTNQRLEYLGDAILYLVIGELLF 63 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 + P DEG++++ R+ +V ++L+E+A++ +LG + + K G R E+ILADT E Sbjct: 64 IKRPDYDEGNLTKARSNIVNNHSLSEMAKKLDLGRHIEMDSSTEKHMGRRNEAILADTFE 123 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP--LPTYL 175 AL+G +FLD+ + + I + R++E + G+ + D KTRLQE + + Y Sbjct: 124 ALMGAIFLDAGYEKTHEFINKLFIKRIEEAATGEAKADYKTRLQECVHACGITNYYIKYH 183 Query: 176 VVQVRGEAHDQEFTI--HCQVSGLSEPVVGTGSSRRKAEQAAA 216 + +G+ H + F I + + LSE G G S+++A+Q AA Sbjct: 184 TISEKGDQHCKTFRIGAYLNNTKLSE---GVGKSKKEAQQNAA 223 >UniRef50_D1C6L4 Ribonuclease III n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6L4_SPHTD Length = 259 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/213 (40%), Positives = 114/213 (53%), Gaps = 12/213 (5%) Query: 8 RLQRKLGYTFNHQELLQQALTHRS-----------ASSKHNERLEFLGDSILSYVIANAL 56 R ++LG F +LL+ ALTHRS A NERLEFLGDS+L + A L Sbjct: 21 RAAQRLGIEFRDLDLLRLALTHRSYLNELGISQIEAVRDSNERLEFLGDSVLGMITAEFL 80 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 Y RFPR+ EG ++ R LVR TLA AR F L E L LG GE+ + G R+ ILA Sbjct: 81 YRRFPRLPEGMLTAYRTALVRTETLARWARRFGLDELLYLGRGEITADGEIRDRILAGAF 140 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+I ++LD I+ + + ++I ++ + K RLQE +Q P Y Sbjct: 141 EAVIAAIYLDRGIRATRRFLRQLLIEDAEQIITEGQETNYKGRLQELVQEHMRVTPMYRT 200 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 V V G AHD+ FT+ V G VGTGSS+R Sbjct: 201 VAVSGPAHDRVFTVEVVVGGECLG-VGTGSSKR 232 >UniRef50_C6HXB9 Ribonuclease III n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXB9_9BACT Length = 254 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 126/223 (56%), Gaps = 9/223 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASS--------KHNERLEFLGDSILSYVIANALYHRF 60 L+ +LGY F+ E L++A H+S ++ + NERLEFLGD++L V+A L + Sbjct: 14 LEERLGYRFSSLERLEEATIHKSFTNETKKGGVRRDNERLEFLGDTVLGLVVAEYLMRLW 73 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG +S+++ +V +LA++AR LG L +G GE + G + SIL+D +EA+I Sbjct: 74 PDSPEGVLSKLKGRIVSEPSLAQIARNIGLGRYLLIGRGEEMTQGREKNSILSDALEAVI 133 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++ D + + IL ++ + +S G+ D KT+LQEY Q LP Y++ Sbjct: 134 AAIYQDGGLDAARQFILREFRELFESVSRGESVADYKTQLQEYCQRELETLPQYVITGQS 193 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F + ++ + G G S+++AEQ AA+ AL+++ Sbjct: 194 GPDHQKVFEVAVRIRDKNWG-EGQGHSKKEAEQKAAKSALERI 235 >UniRef50_D1VB32 Ribonuclease III n=1 Tax=Frankia sp. EuI1c RepID=D1VB32_9ACTO Length = 319 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/214 (39%), Positives = 125/214 (58%), Gaps = 14/214 (6%) Query: 21 ELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 +LL +ALTHRS + ++ NERLEFLGD++L V+ +ALY+R P + EG +++ RA++ Sbjct: 44 DLLDRALTHRSYAYENGGLPTNERLEFLGDAVLQLVVTDALYNRHPDLPEGALAKQRASV 103 Query: 76 VRGNTLAELAREF---ELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 V LA++AR +G L LG GE +GG + SILADT+EALIG V+L+ ++ Sbjct: 104 VNSRALADVARVIGPKGIGPYLLLGKGEETTGGRDKASILADTLEALIGAVYLELGLEVA 163 Query: 133 EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHC 192 +L+ ++ LDE + D KT LQE + P Y+V G H + FT Sbjct: 164 AQLVHRYFDPLLDEAAGRGAGLDWKTSLQERTAELGMGPPDYVVTD-SGPDHAKRFTARA 222 Query: 193 QVSG--LSEPVVGTGSSRRKAEQAAAEQALKKLE 224 ++S E G G S+++AEQ AAE+A LE Sbjct: 223 RISDRIYGE---GEGGSKKEAEQRAAERAFLALE 253 >UniRef50_Q2IIE0 Ribonuclease III n=5 Tax=Cystobacterineae RepID=Q2IIE0_ANADE Length = 385 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 116/217 (53%), Gaps = 12/217 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 + L+ +LG +E ALTH+S ++H NERLEFLGD+++ +++ L Sbjct: 25 VGALEARLGLAVADREAALAALTHKSYVNEHREDGLQDNERLEFLGDAVIDLAVSHRLME 84 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP EGD+S+MRA +V LAE+AR +LG LRLG GE +GG ++ S+LAD +EA Sbjct: 85 RFPSAREGDLSKMRAAVVDEQGLAEMARTLDLGALLRLGRGEELTGGRQKSSLLADAMEA 144 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +I ++ + V + + + G +D KT+LQE Q R P Y VV Sbjct: 145 VIAAIYRGQGLPAVLSFVDRFLGEAFARAAAGTLDRDFKTQLQELSQSRLRATPRYRVVA 204 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK--AEQ 213 G H + F + + G V+G G+ R K AEQ Sbjct: 205 EHGPDHSKTFEVETDLRG---EVMGRGAGRSKKDAEQ 238 >UniRef50_Q73NX5 Ribonuclease 3 n=2 Tax=Treponema RepID=RNC_TREDE Length = 246 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 124/223 (55%), Gaps = 11/223 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHN------ERLEFLGDSILSYVIANALYHRFPR 62 Q++ G F LL A HRS S++HN ERLEFLGDS+L V A+ LY F Sbjct: 19 FQKQAGLKFKDLRLLDLAFHHRSFSNEHNNFHANNERLEFLGDSVLGLVAASYLYKSFED 78 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG++++++A+ V + L++ A + + L LG GE SGG +++ILAD +EA+IG Sbjct: 79 RPEGELAKIKASAVSEDALSKTASKLNISNYLVLGRGEEMSGGREKKAILADALEAVIGA 138 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 ++DS + +K +L ++ + + D K+ LQE +Q + +P Y + + G Sbjct: 139 YYIDSGFKAAQKFVLRLLESTIHSVLEKKFISDYKSLLQELVQKKFKTVPKYELKKASGP 198 Query: 183 AHDQEFTIHCQVSGLSEPVVG--TGSSRRKAEQAAAEQALKKL 223 HD+ F ++G V G +G ++++AEQ+ A+ A + L Sbjct: 199 DHDRTFWFSVSING---KVYGPLSGKTKKEAEQSVAKVAYENL 238 >UniRef50_C5QRI2 Ribonuclease III n=2 Tax=Staphylococcus RepID=C5QRI2_STAEP Length = 248 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 132/224 (58%), Gaps = 21/224 (9%) Query: 14 GYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRVDEG 66 G++FN+ +L QQA +H S + HNERLEFLGD++L ++ L+ + P + EG Sbjct: 25 GFSFNNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPHLPEG 84 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++++MRAT+V +L A + +L E + LG GE K+GG R S+++D EA +G ++LD Sbjct: 85 NLTKMRATIVCEPSLVIFANKIDLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLD 144 Query: 127 SDIQTV----EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 ++TV EK+I + + D G D KT+ QE++ ++ TY +++ G Sbjct: 145 QGLETVWAFAEKVIFPYVE---DNELVG--VVDFKTQFQEFVHRQNKGDVTYRLIKEEGP 199 Query: 183 AHDQEFT--IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 AH + FT + + ++E G G +++++EQ AAEQA K ++ Sbjct: 200 AHHRLFTSEVILENKAVAE---GKGKTKKESEQKAAEQAYKSMK 240 >UniRef50_B8E199 Ribonuclease III n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E199_DICTD Length = 238 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/227 (34%), Positives = 130/227 (57%), Gaps = 15/227 (6%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYH 58 ++ R++ K +FN ++LL +ALTH S ++ N+RLEFLGD++L+ +I L+ Sbjct: 14 IVERVKEKTRVSFNDKDLLIEALTHPSFKHENPNFKQDNQRLEFLGDAVLNMIITEILFQ 73 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 R+ EG +++ R LV+ TL + A+ +LGE + LG GE K GG + SIL+D EA Sbjct: 74 RYREASEGFLTQKRIYLVKEETLYKKAKSLDLGELILLGVGEEKQGGRDKISILSDLFEA 133 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 IG ++LD + + + ++ +EI + + D K LQ YLQ + P Y+V + Sbjct: 134 FIGALYLDKGYEYTKNFVEEIFK---EEIESIEMEVDWKNLLQTYLQ-KEGKKPQYIVSR 189 Query: 179 VRGEAHDQEFTIHCQVSG--LSEPVVGTGSSRRKAEQAAAEQALKKL 223 G HD+ F + + +SE G G ++R+AE AA++AL+K+ Sbjct: 190 EVGPEHDKTFYVELWIDDEKISE---GEGKNKREAEIKAAQKALEKI 233 >UniRef50_Q3SRB3 Ribonuclease 3 n=17 Tax=Rhizobiales RepID=RNC_NITWN Length = 266 Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 112/200 (56%), Gaps = 10/200 (5%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSA--SSKHN----ERLEFLGDSILSYVIANALYH 58 ++ ++++LG+TF LL A TH SA SS+ +RLEFLGD +L V+++ LY Sbjct: 42 IMAAIEQRLGHTFADISLLTTAFTHVSALKSSRGRCDSYQRLEFLGDHVLGLVVSDMLYR 101 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 FP+ DEG++S+ A LVR T ++A+ +L E ++LG +G R S+L D EA Sbjct: 102 AFPKADEGELSKRLADLVRKETCIDVAKSLDLQEGVKLGAVGAGAGARLRRSVLGDICEA 161 Query: 119 LIGGVFLDSDIQTVEKLI-LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 +IG V+LD + NW + + P +DPKT LQE+ QG+ LP P Y V Sbjct: 162 VIGAVYLDGGYAAAAAFVERNWLERMRKPVRP---LRDPKTVLQEWAQGKGLPTPVYREV 218 Query: 178 QVRGEAHDQEFTIHCQVSGL 197 + G HD F + ++ GL Sbjct: 219 ERTGPHHDPRFRVAVELPGL 238 >UniRef50_C9KQ86 Ribonuclease III n=4 Tax=Clostridiales RepID=C9KQ86_9FIRM Length = 247 Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 87/223 (39%), Positives = 127/223 (56%), Gaps = 11/223 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPR 62 L +LG TF+ LL QALTH S +++ HNERLEFLGD++L + LY FP Sbjct: 20 LSERLGVTFHDIALLDQALTHTSYANESKRNTAHNERLEFLGDAVLELASSTYLYEHFPE 79 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EG++++ RA++V TLA+LA LG+ L LG GE GG R++ L D EA+IG Sbjct: 80 MPEGELTKTRASIVCSTTLAKLATGLHLGDYLLLGRGEEMGGGRTRQTNLEDVFEAVIGA 139 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 V+LD + + ++ + + G KD KT LQE + + Y +V G Sbjct: 140 VYLDQGWEAAQAYVVRQLRGEFENAEHGAILKDYKTILQEIVFRKEGQSIAYELVSESGP 199 Query: 183 AHDQEFTIHCQVSG--LSEPVVGTGSSRRKAEQAAAEQALKKL 223 H +EFT +V+G + E GTG S+++AEQ AA +AL+K+ Sbjct: 200 DHAKEFTFRVRVTGKVMGE---GTGHSKKEAEQHAARRALEKI 239 >UniRef50_Q1D5X9 Ribonuclease 3 n=1 Tax=Myxococcus xanthus DK 1622 RepID=RNC_MYXXD Length = 260 Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 88/225 (39%), Positives = 129/225 (57%), Gaps = 8/225 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTH-------RSASSKHNERLEFLGDSILSYVIANALYH 58 + L+ +LG +F+ E +ALTH R K N+RLEFLGDS+++ +++ L Sbjct: 16 VQLLESRLGLSFSRMETALEALTHKTYVNETRDKELKDNQRLEFLGDSVVNLAVSHRLMA 75 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 R P + EGD+++MRA +V + LA +AR LG+ L LG GEL SGG + S+LAD +EA Sbjct: 76 RCPGLPEGDLTKMRARVVNEDGLARVARTIPLGDLLLLGRGELMSGGREKNSVLADALEA 135 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 + G VFL S + L+ ++ LDE+S G + D KT LQE R P Y VV Sbjct: 136 VFGAVFLTSGLDAAVTLVDRYFADLLDEVSSGQGRLDYKTLLQEMAHERLKLQPRYRVVS 195 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F + + G + TG S+++AEQ+AA+ L+KL Sbjct: 196 ESGPEHSKVFEVELML-GETAFARATGRSKKEAEQSAAQATLEKL 239 >UniRef50_C1SM31 Ribonuclease III n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM31_9BACT Length = 209 Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 8/205 (3%) Query: 25 QALTHRS-ASSKHN----ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGN 79 +ALTHRS A K N ERLEFLGD++L ++ L R+ DEG +S++R V Sbjct: 3 EALTHRSYAHEKKNKQNYERLEFLGDAVLQLIVTEYLLDRYKDYDEGLLSKLRGYFVSEG 62 Query: 80 TLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNW 139 L+ +A E +LGE + LG GE SGG +ES+L D E+++ ++LD +I+ Sbjct: 63 FLSRIAIELKLGEHILLGKGEKASGGKYKESLLCDIFESVVAAIYLDGGYGFARDIIIRH 122 Query: 140 YQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL-S 198 + +R+DE D K+ LQ+ Q + LP Y V+ +G HD+ F + V L S Sbjct: 123 FGSRIDEDISNSSFVDAKSELQKISQRKFGTLPDYTVLDEKGPEHDKIFVVRVDVETLVS 182 Query: 199 EPVVGTGSSRRKAEQAAAEQALKKL 223 E G G +++ AE+ AA+ AL+KL Sbjct: 183 EQ--GIGKTKKSAEKDAAKNALRKL 205 >UniRef50_Q8CPI1 Ribonuclease 3 n=63 Tax=Staphylococcaceae RepID=RNC_STAES Length = 245 Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 130/224 (58%), Gaps = 21/224 (9%) Query: 11 RKLGYTFNHQELLQQALTHRSASS-------KHNERLEFLGDSILSYVIANALYHRFPRV 63 + LG F + +L QQA +H S + +HNERLEFLGD++L ++ L+ R P + Sbjct: 22 KSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHL 81 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG++++MRAT+V +L A + +L E + LG GE K+GG R S+++D EA +G + Sbjct: 82 PEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGAL 141 Query: 124 FLDSDIQTV----EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +LD + +V EK+I + + DE+ D KT+ QEY+ ++ TY +++ Sbjct: 142 YLDQGLDSVWTFAEKVIFPYVED--DELVG---VVDFKTQFQEYVHSQNKGDVTYQLIKE 196 Query: 180 RGEAHDQEFT--IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 G AH + FT + + ++E G G +++++EQ AAEQA K Sbjct: 197 EGPAHHRLFTSEVILENKAVAE---GKGKTKKESEQKAAEQAYK 237 >UniRef50_Q6MEK1 Ribonuclease 3 n=2 Tax=Parachlamydiaceae RepID=RNC_PARUW Length = 242 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 13/236 (5%) Query: 1 MNPI--VINR---LQRKLGYTFNHQELLQQALTHRS------ASSKHNERLEFLGDSILS 49 MNPI VI + ++ KLGYTF +LL A HRS ++HNERLEFLGDS+L Sbjct: 8 MNPIEHVIRQAPAIEAKLGYTFKDPQLLVLAFVHRSFINENREVNQHNERLEFLGDSVLG 67 Query: 50 YVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRE 109 +I++ LY + P+ EG +S +R+ LV ++ + +L L LG GE + G RE Sbjct: 68 MLISDYLYCKLPKTPEGQLSYLRSRLVEASSCVHYIQSLDLSGYLLLGKGERMNDGRGRE 127 Query: 110 SILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHL 169 SILAD EA+IG ++LD +Q + + + + EI ++ K LQ+Y Q + Sbjct: 128 SILADLFEAIIGAIYLDGGLQAAKDFLFKNFHQHI-EIILATPLRNWKALLQDYCQKNYQ 186 Query: 170 PLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 P Y V+ G H + F I + E G G+S+++A+QAAA AL ++EL Sbjct: 187 QTPLYQVLHESGPDHSKVFQISVWIQD-RELGRGKGTSKKEAQQAAAADALSRVEL 241 >UniRef50_Q053L4 Ribonuclease 3 n=4 Tax=Leptospira RepID=RNC_LEPBL Length = 247 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 7/219 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHR 59 +L +K+G F+ E A H S +++ NERLEFLGDS+L V A +L+ + Sbjct: 21 FKKLSKKIGIKFSKIEYYNTAFIHSSYKNENPEILEDNERLEFLGDSVLGLVAARSLFQK 80 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P+ EG++SR+++ +V L +A + LGE L LG GE S G R I A+ E+L Sbjct: 81 YPKASEGELSRIKSKIVSTPILNSIAEKLNLGEYLLLGKGEKNSQGKGRRKIAANLFESL 140 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G ++LD + EK I+ + + +D KT+LQEY Q LP Y + Sbjct: 141 VGAIYLDRGFEVAEKFIVQHLLEFAENPDMEESVRDYKTQLQEYSQKHFKTLPVYRMKGE 200 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ 218 G H + F + ++ E G G+S++ AEQ AA++ Sbjct: 201 SGPDHSKMFQVSVRIRDQWE-ASGYGASKKIAEQNAAKE 238 >UniRef50_A8GM79 Ribonuclease 3 n=6 Tax=Rickettsia RepID=RNC_RICAH Length = 227 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 125/223 (56%), Gaps = 11/223 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHN-------ERLEFLGDSILSYVIANALYHRFP 61 L++ LGY+F +QELL +AL+H S H ERLEFLGD++L+ V+ L+ F Sbjct: 7 LEKLLGYSFKNQELLIEALSHPSLRQHHEYKYDKDYERLEFLGDAVLNLVVTEILFRNFA 66 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 +EG+++++R+ LV T+ + + L + + + GE +GG + + + +EALI Sbjct: 67 SYNEGNLAKIRSYLVCKETICVVGTKLTLKDYIIMTYGEEVAGGRDNPNNIENAMEALIA 126 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LDS+I+T +I ++ + + D DPKT LQE+ Q LP Y +++ G Sbjct: 127 AIYLDSNIETTRNIIGKLWEEFIKIQNLTD--YDPKTALQEWAQASSHHLPIYRLIKREG 184 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 AH FT+ +V + GTG S ++AE+ AA L +L+ Sbjct: 185 AAHSSTFTVLVKVKDYEQ--TGTGHSIKEAEKNAARDLLHRLQ 225 >UniRef50_B3QS76 Ribonuclease III n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS76_CHLT3 Length = 269 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 111/200 (55%), Gaps = 20/200 (10%) Query: 24 QQALTHRSA------SSKH---NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 + ALTHRSA S K NERLEFLGD++L V+A LY RFP DEG ++++R+ Sbjct: 58 ETALTHRSAIDLNVYSKKKFVSNERLEFLGDAVLDLVVAECLYTRFPDYDEGKLTKLRSQ 117 Query: 75 LVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD-IQT-- 131 LV TLA AR+ LG L + G E+ LAD EAL+G ++LDSD +QT Sbjct: 118 LVNARTLASFARKIHLGSLLIVSEAAEAIGVRDSETTLADAFEALVGAIYLDSDYLQTKR 177 Query: 132 -VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 +EK IL R E+S D + K+ L EY Q HL +PTY V+ G +H + FT+ Sbjct: 178 FLEKKILEGIDFR--ELSSTD--NNFKSVLLEYAQAHHLEIPTYTVIDEEGPSHKKVFTV 233 Query: 191 HCQVSGLSEPVVGTGSSRRK 210 + + ++G G R K Sbjct: 234 AVYI---GDEMLGKGVGRSK 250 >UniRef50_Q9Z5U2 Ribonuclease 3 n=9 Tax=Sphingomonadales RepID=RNC_ZYMMO Length = 223 Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 112/209 (53%), Gaps = 7/209 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61 N I+ +++ LG+ L +A+TH S + +RLEFLGD +L VIAN LY FP Sbjct: 3 NDAFISWIEKNLGHRPKDPALFLRAMTHPSHGNSDYQRLEFLGDRVLGLVIANWLYDLFP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 R EG +SR +LV G + A +AR L + LRLG G +++L D +EA+IG Sbjct: 63 REPEGKLSRRLNSLVSGASCASIARIVGLPQWLRLGKQARDDGAAASDNVLGDVMEAMIG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRL--DEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +FL+S I+ KLI ++ + E +P K PK+ LQE+ + P Y +V Sbjct: 123 AIFLESGIEAAGKLIHKYWAPLVTGQESAP----KHPKSALQEWAAAHNRRPPVYEIVSR 178 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 G H+ FTI ++G+ E GSS+ Sbjct: 179 TGPQHNPCFTIQVSIAGVGE-ASAEGSSK 206 >UniRef50_C2EW95 Ribonuclease III n=4 Tax=Lactobacillaceae RepID=C2EW95_9LACO Length = 251 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 13/229 (5%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHR 59 + L ++ F + +LL +A T S ++H ER+EFLGD++L +++ +Y R Sbjct: 25 DYLAKEFDIHFTNPDLLAEAFTQASYVNEHPHQGLKFYERIEFLGDAVLELIVSEYIYKR 84 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP + +G ++R+RA +V ++ ++ A+E + +RLG GE +G +R +L D E+ Sbjct: 85 FPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGHGEEMAGARQRPGLLCDIFESF 144 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG ++LD VEK + +LD + D D KT LQE+LQ Y ++Q Sbjct: 145 IGALYLDQGRPAVEKFVRRVIFPKLD-LGWFDHAVDAKTSLQEFLQRDGDVDIEYHLLQE 203 Query: 180 RGEAHDQEFTIHCQVSGLSEPVV--GTGSSRRKAEQAAAEQALKKLELE 226 G +D EF ++ G V+ GTGSS++ AE AA QAL KL E Sbjct: 204 SGTENDPEFKVNVSADG---KVIGEGTGSSKKHAEMKAASQALNKLRQE 249 >UniRef50_A5CEW8 Ribonuclease III n=2 Tax=Orientia tsutsugamushi RepID=A5CEW8_ORITB Length = 251 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 128/223 (57%), Gaps = 14/223 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61 ++ LQ ++GY FN +LL +ALTH S + +K+ +RLEFLGD IL+ VI+ L+ F Sbjct: 24 LDALQSEIGYNFNSIDLLIEALTHPSINQYGYTKNYQRLEFLGDVILNLVISETLFKNFS 83 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 +EG +++ RA LV ++ +A++ L + + + E K GG ++ + +T+EA+IG Sbjct: 84 HYNEGKLAKSRAFLVCNESICLIAQKINLHKYIIMTANEEKCGGRSNKNNIENTMEAVIG 143 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQ----KDPKTRLQEYLQGRHLPLPTYLVV 177 V+LD I ++ ++ L ++ D + DPK+ LQE+ Q ++ +PTY + Sbjct: 144 AVYLDGGIHVIKDIV-----NSLWKVLIKDHELYLIADPKSALQEWSQSKNFGIPTYTLS 198 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 G++H F + +V L EP G G++ + A++ AA+ L Sbjct: 199 SKTGQSHSPLFEVMVKVGRL-EPQYGKGTTIKTAQKNAAQLML 240 >UniRef50_C3P5Q0 Ribonuclease 3 n=173 Tax=cellular organisms RepID=RNC_BACAA Length = 245 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 130/223 (58%), Gaps = 9/223 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 Q K+G TF ++LL QA TH S ++H NERLEFLGD++L ++ L+ ++P Sbjct: 22 FQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYP 81 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG+++++RA +V +L A E G + LG GE +GG R ++LAD EA IG Sbjct: 82 TMSEGELTKLRAAIVCEPSLVRFANELSFGSLVLLGKGEEMTGGRERPALLADVFEAFIG 141 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD ++TV + +++E D K++LQE +Q Y ++Q +G Sbjct: 142 ALYLDQGLETVWGFLKEIVYPKINE-GAFSHVMDYKSQLQELIQRDGSGNIEYQILQEKG 200 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 AH++EF ++ ++ +G+G S+++AEQ AA +ALKKL+ Sbjct: 201 PAHNREFVSRVTLNNVALG-LGSGKSKKEAEQQAAAEALKKLK 242 >UniRef50_D2QZC7 Ribonuclease III n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZC7_9PLAN Length = 273 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 123/224 (54%), Gaps = 5/224 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALYHRFPR 62 + R +R+LGY FN + LL+ ALTH S + NERLEFLGD+IL + LY +FP Sbjct: 45 LARCERRLGYVFNSKPLLRSALTHASGAEHRLASNERLEFLGDAILGVYVCEMLYRQFPD 104 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EGD++++++ +V T A+++ L E L LG G + S S+LAD E+LI Sbjct: 105 YLEGDLTKVKSVVVSRQTCAKVSEALGLQEFLILGKG-MSSSPNVPPSLLADVFESLIAA 163 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 ++LD Q + I N+ ++ + G+ + K+ LQ++ Q PTY ++ +G Sbjct: 164 IYLDGGEQAARQFINNYIGPEVELAAAGELGGNYKSLLQQFAQRECGNTPTYHLLDEKGP 223 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H + F I V G + G ++++AEQ AA AL +++ E Sbjct: 224 DHSKCFKISASVGG-KKYQAAWGRNKKEAEQRAANNALAEIKGE 266 >UniRef50_D1BLX9 Ribonuclease III n=3 Tax=Veillonella RepID=D1BLX9_VEIPT Length = 246 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 118/195 (60%), Gaps = 1/195 (0%) Query: 29 HRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREF 88 H+S HN+RLEFLGD++L +I L+ +P + EG++++++A V ++LA ++R Sbjct: 49 HKSKHIHHNQRLEFLGDAVLDLIIGEYLFKTYPDMAEGNLTKIKAATVCEDSLASVSRSL 108 Query: 89 ELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEIS 148 +LG+ L LG GE SGG R SILADT E+LIG +++ +D QT +L T + + Sbjct: 109 QLGQYLLLGHGERASGGNDRNSILADTFESLIGAIYISTDYQTAMAFVLKHLTTYIMQAL 168 Query: 149 PGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 G + KD KT LQEY+Q Y ++ G H + F + +++G++ G+G S+ Sbjct: 169 EGKRGKDYKTLLQEYVQRDGDKHIVYHLLSESGPDHAKTFHMEVEINGVTYE-AGSGKSK 227 Query: 209 RKAEQAAAEQALKKL 223 + AEQ AA+ L+KL Sbjct: 228 KIAEQHAAQLTLEKL 242 >UniRef50_B0SDK6 Ribonuclease III n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDK6_LEPBA Length = 242 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 9/227 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 + LQ +F LL A HRS +++ NERLEFLGDS+L + A LY Sbjct: 17 LQELQSITDTSFKDISLLHLAFVHRSFANEDSDRYLSDNERLEFLGDSVLGILAAEYLYK 76 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P+ EG ++++++ +V +A+LAR + + L LG GE K G ++ AD EA Sbjct: 77 SLPKGKEGILAKLKSKMVSAPAIAKLARFYRFPDFLLLGKGE-KEKGEANLNLQADCFEA 135 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +G ++LD + + + +QT + ++ KD KT LQEY Q + LP Y++++ Sbjct: 136 FLGALYLDQGLNSCRIFLTPHFQTMEKGVESAEETKDYKTILQEYCQKKWKKLPEYILLK 195 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 G HD++F++ + G G ++R+AEQ AA+ AL+ L+L Sbjct: 196 EEGPDHDKDFSVSVSCENYFQS-NGDGKNKRRAEQMAAKAALRILKL 241 >UniRef50_D1B5N5 Ribonuclease III n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5N5_THEAS Length = 226 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 86/225 (38%), Positives = 125/225 (55%), Gaps = 15/225 (6%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHR 59 + LQ ++GY F +LL +ALTH S +++ NERLEFLGDS+L +A LY R Sbjct: 10 ALEELQDRVGYRFADTQLLIEALTHSSFANQAQLGYCNERLEFLGDSVLGLCVAEELYRR 69 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 P EG ++++++T V + LA R L LR+G +K G E ++AD +EAL Sbjct: 70 HPSEREGRLTKLKSTGVSSHNLARSGRVLGLDRVLRVGKA-IKGG--PSEGMVADAMEAL 126 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG V+LD ++ ++ LD +S +DPK+ LQE Q +PLP+Y +V+V Sbjct: 127 IGAVYLDGGLEAARGIVSR--HVSLDSLS----SQDPKSALQEMAQRLGIPLPSYRLVEV 180 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 RG H F + + G VG G SRR+AE AA AL +L+ Sbjct: 181 RGPEHRATFVVQVWLKG-ELMGVGNGGSRREAESKAASAALNRLQ 224 >UniRef50_B4U7T8 Ribonuclease 3 n=3 Tax=Aquificaceae RepID=RNC_HYDS0 Length = 232 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 121/218 (55%), Gaps = 7/218 (3%) Query: 9 LQRKLGYTFNHQELLQQALTH--RSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 L+ K+GY F + L+++A TH S SS++ E LEFLGD++++++ N L FP EG Sbjct: 7 LEEKIGYRFKDKNLVKKAFTHISFSKSSENYEVLEFLGDALVNFMTVNILVEAFPNKKEG 66 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++S++++ L+ LA LA+ + + + GE G + SIL D EA +++D Sbjct: 67 ELSQLKSFLISEEFLASLAKSLNFEKYILISKGEELKGSNKNPSILCDVFEAFWAAIYID 126 Query: 127 S--DIQTVEKLILNWYQTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 S D + + L + ++++ L+ ++ ++D KT LQE Q + P Y V+ V G Sbjct: 127 SGYDCKLTKSLFEHHFKSQILEMVNSNSLKQDYKTALQEITQKKWKERPIYNVISVEGPE 186 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 H + FT+ C L G G+S++ AEQ AA+ L+ Sbjct: 187 HRKTFTVECLFKDLR--TTGKGNSKKYAEQEAAKNMLQ 222 >UniRef50_C5NVE5 Ribonuclease III n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVE5_9BACL Length = 237 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 129/227 (56%), Gaps = 9/227 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSAS-----SKH--NERLEFLGDSILSYVIANALY 57 ++N L + G+ E + + +H S + +KH ERLEFLGD+++ + L+ Sbjct: 9 LLNNLNEEYGFNLKFSENFKNSFSHSSYTNEKRIAKHLNYERLEFLGDAVVELTTSEFLF 68 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +F + EG+++++RA++V TL + A + L +C+ LG GE K GG R ++LAD E Sbjct: 69 KKFSELPEGELTKLRASIVCEKTLVKYALQLSLDKCIYLGKGEEKMGGRSRAALLADIFE 128 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 + G ++L+S+++ V+ + N T + ++ D KT LQEY+ L Y+V+ Sbjct: 129 SFTGAMYLESNLEVVKTFLNNTLFTEVQDLEY-HSFVDYKTILQEYISKIKLGEIEYVVL 187 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G +H + FT + G + GT ++++++EQ +A+QAL+KLE Sbjct: 188 DSSGPSHSKTFTSAVLI-GRKQYGSGTATTKKESEQLSAKQALEKLE 233 >UniRef50_Q0BTG2 Ribonuclease III n=12 Tax=Rhodospirillales RepID=Q0BTG2_GRABC Length = 258 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/226 (36%), Positives = 118/226 (52%), Gaps = 20/226 (8%) Query: 13 LGYTFNHQELLQQALTHRSA--------------SSKHNERLEFLGDSILSYVIANALYH 58 L + F ++LL +ALTHRSA + NERLEF+GD +L V+A L Sbjct: 26 LSHRFARRDLLAEALTHRSAVKIMHGQTGQSLPRGAGSNERLEFVGDRVLGLVVAEWLVE 85 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP EG++ R A LV LA +A + L + L + PGE K+G + ++L+D +EA Sbjct: 86 RFPLEQEGELGRRLAHLVSQPVLAGIAEQSGLPQILSVAPGEAKAGVRKLATVLSDAMEA 145 Query: 119 LIGGVFLDSDIQTVEKLI-LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 LIG ++LD+ + V + I +W + P KD KT LQE+ QG L LPTY + Sbjct: 146 LIGALYLDAGLDPVRQFIRRHWEPVMQRQTEP---PKDAKTALQEWAQGLGLHLPTYRLA 202 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + G H+ F + V G S+R AEQ AA+ L ++ Sbjct: 203 RREGPPHNPVFWVEVLVG--DHVGQGQAGSKRAAEQLAAQDLLGRI 246 >UniRef50_D0RNU3 Ribonuclease III n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNU3_9RICK Length = 225 Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 121/222 (54%), Gaps = 7/222 (3%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSAS---SKHNERLEFLGDSILSYVIANALYHRFPRVD 64 ++++ L FN++ L++QA TH+S S + +NERLEFLGD +L VIA+ L +P+ Sbjct: 8 QVEKILEIKFNNKSLIEQAFTHKSKSVNINNNNERLEFLGDRVLGLVIASYLNDNYPKDS 67 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG + + A+LV T +++ E+ L L + K + IL D E++IG VF Sbjct: 68 EGVLDKKLASLVNKETCSKIISSLEIDRFLSLSEAQ-KQNKAGNKKILGDLCESIIGAVF 126 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 +D + +K IL ++ L + DPKT+LQEY + LP Y + G +H Sbjct: 127 MDKGFEQTKKFILKIWKENLKNTTQV--FIDPKTKLQEYSLKLYKKLPVYKYISNSGPSH 184 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 F + + S+ V TG+S++ AE AA++ ++ L+++ Sbjct: 185 KPNFRVSVSIEQ-SKSFVATGTSKKNAETNAAKKLIEYLKIK 225 >UniRef50_Q2S2W4 Ribonuclease III n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2W4_SALRD Length = 248 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/230 (35%), Positives = 119/230 (51%), Gaps = 11/230 (4%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 ++P I +L +G + ++ALTHRS H NERLEFLGD++L + Sbjct: 16 VDPAAIEQL---VGRPVDDLSHYRRALTHRSLLRVHPARTFRSNERLEFLGDALLDVFVG 72 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 LY RFP DEG ++R+RA LV LA AR LG L + + G SILA Sbjct: 73 EVLYDRFPEKDEGALTRLRARLVSERPLATYARGLGLGPHLLMSENAAEGDGRDNPSILA 132 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA +G V+LD + + + +D + + K++L E+LQ P PT Sbjct: 133 DAFEAFVGAVYLDLGHEAARGFVQDRVLAPVDLEDVATRDDNYKSQLLEHLQALGRPQPT 192 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 Y VV+ +G +HD+ FT+ +V G + GT S++ AEQ AA + L ++ Sbjct: 193 YHVVEEKGPSHDKTFTVEVRV-GDAAYERGTAGSKQDAEQQAARRTLDEM 241 >UniRef50_C5CGL9 Ribonuclease III n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGL9_KOSOT Length = 249 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 11/212 (5%) Query: 21 ELLQQALTHRSASSK---------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRM 71 E + +AL H S +++ NERLEFLGD++L+ +A+ LY + VDEG MS+ Sbjct: 22 EWIFKALCHSSYANEVVRKGMNVESNERLEFLGDAVLALSLADLLYREYD-VDEGVMSKT 80 Query: 72 RATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 RA + LAE+AR +GE L LG GELK+GG R+SILAD EA++G ++L + Sbjct: 81 RAVVASEKVLAEVARNMNIGEYLLLGKGELKTGGRGRDSILADAFEAILGALYLSEGFEI 140 Query: 132 VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 + +++ + D KT LQE QG P Y ++ G ++ F + Sbjct: 141 ARNFVKEKLGIYIEKALNKELVLDYKTTLQELTQGNLGVRPEYSYIENIGTPQNKLFHVE 200 Query: 192 CQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 +V+G + VG G +++ AEQ AA +A +KL Sbjct: 201 VRVNGKA-LAVGYGKTKKAAEQDAARKAYEKL 231 >UniRef50_C1TMA2 Ribonuclease III n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMA2_9BACT Length = 244 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/221 (36%), Positives = 116/221 (52%), Gaps = 10/221 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRV 63 +Q +LGY+F ELL++ALTH S + + NERLEFLGD++L + L+ + Sbjct: 13 IQDRLGYSFTDIELLREALTHSSYAHESGLRSWNERLEFLGDAVLELATSTRLFRAMKDM 72 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSG-GFRRESILADTVEALIGG 122 DEG ++R+RA LVR L A L LR+ G K G G S+ AD +EA+ G Sbjct: 73 DEGGLTRLRARLVRKEALLTWAEALGLSGILRVNRGLRKKGEGCDLSSMHADAIEAIFGA 132 Query: 123 VFLDSDIQTVEKLI---LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 V++D E ++ L++ + D I G+ DPK+ LQ+ LQ + PLP Y ++ Sbjct: 133 VYMDGGYDMAESVVNRYLDFLFEKGDYIQDGNSSIDPKSELQQILQIKGEPLPEYRIMSR 192 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 G H F + VSG+ G G S ++AE AA L Sbjct: 193 EGPPHSPSFEVELYVSGVLLS-SGRGRSIKEAEVQAALDGL 232 >UniRef50_A5VKP2 Ribonuclease 3 n=25 Tax=Lactobacillus RepID=RNC_LACRD Length = 233 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 122/226 (53%), Gaps = 13/226 (5%) Query: 7 NRLQRKLGYTFNHQELLQQALT-------HRSASSKHNERLEFLGDSILSYVIANALYHR 59 + L ++ F++ LL +A T H + K+ ER+EFLGD++L +++ +Y R Sbjct: 7 DYLAKEFNIHFDNPALLAEAFTQASYVNEHPNQGLKYYERIEFLGDAVLELIVSEYIYKR 66 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP + +G ++R+RA +V ++ ++ A+E + +RLG GE +G R +L D E+ Sbjct: 67 FPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGHGEEMAGARERPGLLCDIFESF 126 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG ++LD VEK + +LD + D D KT LQE+LQ Y +V+ Sbjct: 127 IGALYLDQGRPAVEKFVQRVIFPKLD-MGWFDHAVDAKTSLQEFLQRDGDIAIEYHLVEE 185 Query: 180 RGEAHDQEFTIHCQVSGLSEPVV--GTGSSRRKAEQAAAEQALKKL 223 G +D EF ++ +G V+ G GSS++ AE AA+QAL + Sbjct: 186 SGTENDPEFKVNVTANG---DVIGEGKGSSKKHAEMQAAQQALDNM 228 >UniRef50_C8NZK7 Ribonuclease III n=4 Tax=Erysipelotrichaceae RepID=C8NZK7_ERYRH Length = 226 Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 123/218 (56%), Gaps = 18/218 (8%) Query: 17 FNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 + +++L+ A H S ++ NERLEF+GD++L ++ L+ +EGDM+ Sbjct: 14 YFNKDLINNAFIHSSYVNEAEELLEDNERLEFMGDAVLQICVSERLFKHQDHFNEGDMTL 73 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 RA LV + LA+ + + +L + L LG GE K+GG R SI+AD E+ IG ++LDS I Sbjct: 74 YRAKLVCEDALAQYSLKLKLNDYLMLGMGEEKNGGRVRVSIIADLFESFIGALYLDSGID 133 Query: 131 TVEKL---ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 +V ++ ++N L+ +S D KT+LQEY+Q +Y V+ V G ++ E Sbjct: 134 SVNRVLDSVMNDAFNELESLSI----TDYKTKLQEYIQSDSRKSVSYEVINVVGPSNAPE 189 Query: 188 FTIHCQVSGLSEPVVGTGS--SRRKAEQAAAEQALKKL 223 F + V L E + G G S++KAEQ AA+ A +KL Sbjct: 190 FEV---VVKLDELIFGQGKGLSKKKAEQMAAKDAFEKL 224 >UniRef50_C7RGT7 Ribonuclease III n=4 Tax=Anaerococcus RepID=C7RGT7_ANAPD Length = 239 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 108/192 (56%), Gaps = 7/192 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS------KHNERLEFLGDSILSYVIANALYHR 59 I + K+GYTFN ++L+ A TH S ++ K NERLEFLGDSIL +++ L+ Sbjct: 11 IEEFENKIGYTFNDKDLIDVAFTHSSYTNEVKGKKKSNERLEFLGDSILDMIVSEVLFKH 70 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 + EG +++ R+ LV ++ A+ +FE+ L G GE + GG ++ + ADT EA+ Sbjct: 71 YSMKPEGWLTKTRSRLVCTSSFAKACEKFEMTTFLNFGNGERQGGGELKKHVKADTFEAV 130 Query: 120 IGGVFLDSDIQTVEKLIL-NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++LDS + K + N+ + L+ I+ D KT+LQEY + + Y++V+ Sbjct: 131 CAAIYLDSSYDNLFKFLKENYKEEALEIINDDSIFNDYKTKLQEYHNAKDRKILKYVLVK 190 Query: 179 VRGEAHDQEFTI 190 G H++ FT+ Sbjct: 191 EEGPEHEKTFTM 202 >UniRef50_B9L2H4 Ribonuclease III n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2H4_THERP Length = 252 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/226 (38%), Positives = 123/226 (54%), Gaps = 13/226 (5%) Query: 13 LGYTFNHQELLQQALTH-----------RSASSKHNERLEFLGDSILSYVIANALYHRFP 61 LG F +LL+QALTH ++A + NERLEFLGD++L +++ LY RFP Sbjct: 25 LGIAFRRPDLLRQALTHLSYVYERSRSTQAAVEEANERLEFLGDAVLELLVSEFLYRRFP 84 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGEL-KSGGFRRESILADTVEALI 120 EG+++ RA LVR TLA AR F L E L LG E+ + G RE ILA EA++ Sbjct: 85 TASEGELTAYRAALVRTPTLARWARRFRLDEFLYLGRSEVPRPGRPVRERILAGAFEAVL 144 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD I+ V + + + + + ++ K RLQE +Q R P Y + V Sbjct: 145 GALYLDRGIRVVRRFLHRLLLEEAEGLIAIGQNENYKGRLQELIQDRLRITPVYRTIAVT 204 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G AH + FT + G VG G S+R AEQ AA +AL++L E Sbjct: 205 GPAHQRTFTAEVLI-GERPYGVGHGPSKRAAEQEAARRALERLRAE 249 >UniRef50_C8W741 Ribonuclease III n=3 Tax=Atopobium RepID=C8W741_ATOPD Length = 243 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 124/220 (56%), Gaps = 11/220 (5%) Query: 14 GYTFNHQELLQQALTHRSAS-----SKHNERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 G+TF +++L++ ALTH SA S ERLEFLGDSIL +IA L+ R+P +DEG + Sbjct: 15 GHTFINKDLIEAALTHPSAVEGKPVSASYERLEFLGDSILGAIIATELFERYPDMDEGQL 74 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD 128 +R++ +LV G+TL+ ++ + + +G E +G +S L + E+++G ++LD+ Sbjct: 75 TRLKISLVSGHTLSIVSDTLGVSPLIVMGISEKGTGKRGMKSALENVYESIVGALYLDAG 134 Query: 129 IQTVEKLILNWYQTRLDEISP--GDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + ++ +T ISP + PK+RLQE +Q + P Y ++ G AH Sbjct: 135 FEPTRDFVI---RTLGPHISPTLAVRSVSPKSRLQEAVQAQGKATPEYKLIGESGPAHTP 191 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 FT V GL + G G S++ AE AA+ AL +L ++ Sbjct: 192 TFTAVVFVDGL-KVGRGQGPSKKAAESEAAQDALVRLGVD 230 >UniRef50_D0YUT0 Ribonuclease III n=3 Tax=Mobiluncus RepID=D0YUT0_9ACTO Length = 269 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 112/202 (55%), Gaps = 12/202 (5%) Query: 21 ELLQQALTHRSASSKH--------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMR 72 +LL A+THRS S +H NERLEFLGD++L ++ LY FP EG +++MR Sbjct: 37 DLLVLAMTHRSFSHEHGKTGSRGTNERLEFLGDAVLQIIVTEYLYRNFPDEPEGTLAQMR 96 Query: 73 ATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 A V LAE+AR+ LGE LRLG GE + GG ++SIL+DT+EALIG FL + +V Sbjct: 97 AATVSQTPLAEVARKIHLGEYLRLGVGEDRQGGRDKDSILSDTLEALIGATFLSCGL-SV 155 Query: 133 EKLILNWYQTRLDEISPGDKQK-DPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 ++++ + R +P D KT LQE L L TY VV G H + F+ Sbjct: 156 TRVVVERHLRRFLRNAPRRAVTLDWKTTLQELLSAADLGEVTYEVVAT-GPDHQKHFSAQ 214 Query: 192 CQVSGLSEPVVGTGSSRRKAEQ 213 V G G GSS++ AE Sbjct: 215 ALVEG-ENWGEGQGSSKKIAEH 235 >UniRef50_Q8G7H1 Ribonuclease 3 n=20 Tax=Bifidobacteriaceae RepID=RNC_BIFLO Length = 242 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/229 (37%), Positives = 120/229 (52%), Gaps = 9/229 (3%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALY 57 P N L LG T + +LL QALTHRS S +H ERLEFLGD++L V L+ Sbjct: 9 PTPANELLEALGTTLS-PDLLVQALTHRSFSHEHPGVANYERLEFLGDAVLELVSTETLF 67 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAR-EFELGECLRLGPGELKSGGFRRESILADTV 116 P + EG +++MRA V + L+ +A+ + ++G + LG GE + GG + SIL D V Sbjct: 68 TIHPDMTEGQLAKMRAKAVSEDALSAIAKTKLKVGPYILLGHGEAEQGGAEKNSILCDIV 127 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 E+LIG FL+ I K+I L E++ D KT L G P Y Sbjct: 128 ESLIGATFLEHGIDEARKVIHRLIDDTLAEVATEGPALDWKTSLTVKAHGLGKEEPVYH- 186 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPV-VGTGSSRRKAEQAAAEQALKKLE 224 ++V G + Q FT + + + +G GSS+RKA+ AAAE K L+ Sbjct: 187 MEVSGPEYAQIFTARVSLGENGDIIGIGKGSSKRKAQLAAAEAGWKSLD 235 >UniRef50_D0WEA4 Ribonuclease III n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEA4_9ACTN Length = 312 Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRF 60 ++ Q +G F+ ++L A+TH SA+ ERLEFLGDSIL ++AN +H + Sbjct: 11 LDLAQHVIGVAFDDIDILLAAITHPSATEGKPVKFSYERLEFLGDSILGAIVANEAFHAY 70 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P +DEG ++R++ LV G++L+++A + + + G E +G S L + EAL+ Sbjct: 71 PEIDEGGLTRIKVALVSGSSLSDVAAKLGFADIIVFGSSERGTGRRGLHSALENVYEALV 130 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 +FLD + + R+D I + ++PK+ LQE LQ + PTY +V+ + Sbjct: 131 AALFLDKGMDGARDFVRRTLIPRMD-IEMAREPENPKSALQEKLQEEGI-TPTYKLVETQ 188 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD+ F +GL+ G G +++++E AA+ AL ++ + Sbjct: 189 GPPHDRTFVSQV-FAGLTALAQGIGRTKKESESQAAKAALDMIDAD 233 >UniRef50_C7N559 Ribonuclease III n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N559_SLAHD Length = 300 Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 123/222 (55%), Gaps = 10/222 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRF 60 I R Q +G F + ++L A+TH SA+ ERLEFLGDSIL ++AN +HR+ Sbjct: 12 IQRAQEIIGTQFGNTDILLHAITHPSATEGKPVKLSYERLEFLGDSILGAIVANEAFHRY 71 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P +DEG ++R++ LV G +L+++A E + + G E +G S L + EA++ Sbjct: 72 PDLDEGGLTRIKVALVSGASLSKVAAELGFEDIIVFGSSEQGTGKRGLHSALENVYEAVV 131 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLD-EISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 ++LD ++ ++ R+ E++ + ++PK+ LQE LQ + PTY +V+ Sbjct: 132 AALYLDQGMEGARSFVMKTLVPRMSRELA--TEPENPKSALQEKLQEEGI-TPTYKLVET 188 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 +G HD+ F +G+ G G +++++E AA+ AL+ Sbjct: 189 QGPPHDRTFVSQV-FAGMKALASGMGRTKKESESQAAKAALE 229 >UniRef50_Q3B6L3 Ribonuclease 3 n=9 Tax=Chlorobiaceae RepID=RNC_PELLD Length = 276 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 83/219 (37%), Positives = 115/219 (52%), Gaps = 23/219 (10%) Query: 21 ELLQQALTHRSAS--------SKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMR 72 EL ALTHRS ++ N+RLEFLGDS+L +I+ LY RFP EG++S R Sbjct: 46 ELYATALTHRSMVHDTTAPEITRSNQRLEFLGDSVLGLIISEYLYRRFPEGTEGELSSYR 105 Query: 73 ATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 A +V G +LA AR +LG L +G + S LAD EAL G ++LD + V Sbjct: 106 AKIVNGKSLAGFARNLDLGIHLIIGESADQQRIRTSTSTLADAFEALTGAIYLDRGLDAV 165 Query: 133 EKLILNWYQTRLDEISPG-----DKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 + I + +D SP + + K+RL E+ Q LP P Y V+ G H++ Sbjct: 166 REFI---EEQIID--SPAFEAMVSTENNHKSRLIEHTQSHQLPPPVYTVLSEEGAEHEKT 220 Query: 188 FTIHCQVSGLSEPVVGTGSSRRK--AEQAAAEQALKKLE 224 FTI +G +G G++ RK AEQ AAE+A+ LE Sbjct: 221 FTIEVSCNGRR---LGRGTALRKKDAEQLAAEEAMGALE 256 >UniRef50_A8SP75 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SP75_9FIRM Length = 232 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 130/226 (57%), Gaps = 16/226 (7%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHR 59 + L++K+GY F LL ALTH S +++ ERLEFLGD+IL Y+++ L+ + Sbjct: 9 DELEKKIGYQFKDINLLITALTHTSFANELKVNKTDSYERLEFLGDAILEYIVSEYLFLK 68 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +EG ++++RA+LV TL++++ G+ +RL GE +GG +R+SIL D E++ Sbjct: 69 KKEYEEGRLTKLRASLVCEFTLSQISESLGYGDYVRLSKGEELTGGRKRKSILCDLFESV 128 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQ--GRHLPLPTYLVV 177 +G ++LD I+ ++ + ++ LD++ D K+ LQE+ Q GR L +Y ++ Sbjct: 129 LGAMYLDGGIEPAKEFV---HRFLLDDVETKSLFYDAKSTLQEFCQKHGRQL---SYELI 182 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + RG H + F ++G G G +R+ +EQ AA + L +L Sbjct: 183 EERGPEHSKIFVSDAVING-KVTARGEGPNRKTSEQMAAYKTLLQL 227 >UniRef50_A0PQ48 Ribonuclease III Rnc n=2 Tax=Mycobacterium RepID=A0PQ48_MYCUA Length = 243 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 9/178 (5%) Query: 20 QELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 +EL+ ALTHRS + ++ NERLEFLGD++L I + L+HR P EGD++++RA+ Sbjct: 18 EELVTLALTHRSYAYENGGLPTNERLEFLGDAVLGLTITDELFHRHPERSEGDLAKLRAS 77 Query: 75 LVRGNTLAELAREFE---LGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 +V LA++AR LG + LG GE +GG + SILAD +E+L+G ++L ++ Sbjct: 78 VVNTQALADVARHLSDHGLGAHMLLGRGEANTGGADKSSILADGMESLLGAIYLHHGMEV 137 Query: 132 VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 + IL + LD D KT LQE R L P+Y V G H +EFT Sbjct: 138 AREAILRIFGPLLDAAPTLGAGLDWKTSLQELTASRSLGAPSYAVTST-GPDHHKEFT 194 >UniRef50_B5YDQ5 Ribonuclease III n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDQ5_DICT6 Length = 237 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 130/227 (57%), Gaps = 15/227 (6%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYH 58 ++++++ K G +F+++ L+ +ALTH S ++ N+RLEFLGD++L+ +I L+ Sbjct: 16 ILSKVKEKTGISFDNKNLIIEALTHPSFKHENPHFEYDNQRLEFLGDAVLNMIITEILFQ 75 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 R+ EG +++ R +V+ TL + A+ LG+ + LG GE K GG + SIL+D EA Sbjct: 76 RYKEASEGILTQKRIYMVKEETLYKKAKSLNLGDLILLGKGEEKQGGREKISILSDLFEA 135 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL--QGRHLPLPTYLV 176 IG ++LD + + + ++ +EI + + D K LQ L +G+ P+Y+V Sbjct: 136 FIGALYLDKGYEFTKNFVERIFR---EEIESVEMEIDWKNLLQSQLMKEGKK---PSYIV 189 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + G H++ F + + ++ G G ++R+AE AA+ AL+K+ Sbjct: 190 TREEGPEHNKIFYVELWIDN-NKIAEGEGKTKREAEIKAAKIALEKM 235 >UniRef50_A4E6T0 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E6T0_9ACTN Length = 241 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 7/209 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS-----SKHNERLEFLGDSILSYVIANALYHRF 60 + R Q LG+ FN++ LL+ ALTH SA S ERLEFLGDSIL V+A +L+ + Sbjct: 7 LTRAQEILGHEFNNKVLLRAALTHPSAVEGQPVSASYERLEFLGDSILGAVVARSLFESY 66 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P DEG ++R++ +LV G TL+E++ E + + + G E +G S L + E+L+ Sbjct: 67 PEFDEGKLTRLKVSLVSGATLSEVSHELGIDDIIIFGASETGTGARGLHSALENVYESLV 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD+ + I + L + +PK+ LQE +Q P Y +V Sbjct: 127 GALYLDAGWDVAAEFIHRTLKPHLAS-ERAEHPANPKSFLQECVQADGHEPPAYKLVGSE 185 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G AH FT + G+ + GTGSS++ Sbjct: 186 GPAHAPTFTAVVLIDGIRQG-RGTGSSKK 213 >UniRef50_A6C1C3 Ribonuclease III n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1C3_9PLAN Length = 247 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/231 (34%), Positives = 125/231 (54%), Gaps = 9/231 (3%) Query: 1 MNPIVINRL----QRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIA 53 ++P+ I++L Q+ LGY F ELL+ LTH SA+ NERLEFLGD+IL ++ Sbjct: 5 LSPVEIDQLLEECQQNLGYRFVDCELLKSCLTHTSAAKTRMDSNERLEFLGDAILGSIVC 64 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 L+ +FP EG+++R+++ +V NT LARE L + +G G + ES+LA Sbjct: 65 EKLFDQFPNAPEGELTRIKSAVVSRNTCTRLAREKGLDRFIFVGKGLAMTENL-PESLLA 123 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 EALI G++LD I V + + + + S + K+ LQ+Y Q + P Sbjct: 124 GMFEALIAGIYLDGGIAPVHQFLDPLIERENSKASRSVHGYNYKSLLQQYSQKKFSQTPI 183 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 Y V+ +G H + F + + G + GS++++AEQ AA AL++ E Sbjct: 184 YEVLDEKGPDHSKFFKV-TAIIGEHKYEPAWGSTKKEAEQRAAYNALRENE 233 >UniRef50_A6G995 Ribonuclease III n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G995_9DELT Length = 244 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 24/222 (10%) Query: 6 INRLQRKLGYTFNHQELLQQALT-------HRSASSKHNERLEFLGDSILSYVIANALYH 58 ++ L LG+ F +LL+ ALT +R A N LEF GD++L V A+AL+ Sbjct: 9 LDPLMATLGHAFAQPQLLRVALTVGSWANENRDAGWPSNACLEFFGDAVLDLVAADALWR 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFPR+ EG ++R+RA+LV +LA+ AR +LG + LG G+ + G R+ LAD +EA Sbjct: 69 RFPRLGEGALTRLRASLVSERSLAKAARSIDLGRWIYLGRGDEQRGARERDGTLADALEA 128 Query: 119 LIGGVFLD----------SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRH 168 ++G FLD + Q E+L + R+ ++P D DPK+RLQ+ +Q Sbjct: 129 VLGAAFLDAREAGGDPSVAAAQVFERL----FGERVRSLAPEDGL-DPKSRLQQLVQAER 183 Query: 169 LPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEP--VVGTGSSR 208 P Y+ + A D + ++ +P V+G G R Sbjct: 184 RLTPVYVAIGEPPPADDPHWRARVELRPAGKPVEVLGEGEGR 225 >UniRef50_Q2SRZ8 Ribonuclease 3 n=4 Tax=Mollicutes RepID=RNC_MYCCT Length = 232 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 126/230 (54%), Gaps = 16/230 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRF 60 I K N Q++ ++ALTH S +++ +RLEFLGD+IL ++ L+ + Sbjct: 3 IKNFFEKYNIKINDQQIYKEALTHNSYANERKLKYSYQRLEFLGDAILQMYVSKFLFFHY 62 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 ++ EG+++R+R++ VR +L+ +A++ LG+ +RLG GEL + G+ ++SILAD EAL Sbjct: 63 SKLGEGELTRLRSSTVREESLSRIAKDINLGQLIRLGHGELMTKGYEKQSILADIFEALT 122 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPG----DKQKDPKTRLQEYLQGRHLPLPTYLV 176 V++D + E +L W + L + + KD K+ LQE LQ Y++ Sbjct: 123 AAVYIDQN----EDGLLIWLEQTLFKYMKDPTFINVTKDFKSELQELLQSEKRSDLKYII 178 Query: 177 VQVRGEAHDQE--FTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 ++ + +T+ + G + VG G S+++AEQ AA L KL+ Sbjct: 179 ENEEFFVNENKTLYTVSVNLDG-QKFGVGKGYSKQEAEQNAASDCLSKLK 227 >UniRef50_A9FII1 Ribonuclease III n=2 Tax=Deltaproteobacteria RepID=A9FII1_SORC5 Length = 275 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 11/196 (5%) Query: 23 LQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 L++ALTH S S++ N+RLEFLGD++L + L RFP EG++S MR+ L Sbjct: 21 LEEALTHPSFSNEQRGGRRVDNQRLEFLGDAVLGLCVTELLMERFPGAREGELSMMRSAL 80 Query: 76 VRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKL 135 V + LA AR ELG LR+G G +G + ++LAD EAL+ ++LD ++ L Sbjct: 81 VNTDALAAWARGIELGAALRVGRGAEVAGERDQTNVLADATEALVAALYLDRGFESARAL 140 Query: 136 ILNWYQTRLDEISPGD-KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQV 194 + L +++ G +D K+ LQE +Q R P Y ++ G HD+ F + +V Sbjct: 141 SRKIAASPLAQLASGSLLGRDAKSELQERVQARGAASPRYRLMGTEGPDHDRAFLVAVEV 200 Query: 195 SGLSEPVVGTGSSRRK 210 G V+GTG R K Sbjct: 201 DG---QVIGTGRGRSK 213 >UniRef50_Q1IJU6 Ribonuclease III n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJU6_ACIBL Length = 258 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 17/206 (8%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH------------NERLEFLGDSILSYVIA 53 I L++ L + F QELL +ALTH S + + NE+LEF+GDS+L++V + Sbjct: 7 IAALEKALDHKFEEQELLVRALTHSSYAREQRDHIHDNSVPNDNEQLEFIGDSVLAFVTS 66 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 L +FP EG++S++RA LV L + AR +LG+ LRLG GE +SGG + +IL Sbjct: 67 QELVKKFPHFQEGELSKLRAYLVSARHLIQTARNLDLGKFLRLGRGEERSGGRSKSAILV 126 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWY---QTRLDEISPGDK--QKDPKTRLQEYLQGRH 168 D +EA+I ++LD ++ +K IL + + E G D K+ LQE Sbjct: 127 DALEAVIAAIYLDGGLRVAQKFILREIVRPELKRMETEHGSALPVTDYKSALQEQAHAAG 186 Query: 169 LPLPTYLVVQVRGEAHDQEFTIHCQV 194 Y VV+ G H + FT+ ++ Sbjct: 187 RKRIVYAVVKEEGPEHRKTFTVEARI 212 >UniRef50_A9WMX9 Ribonuclease III n=3 Tax=Micrococcaceae RepID=A9WMX9_RENSM Length = 273 Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 23 LQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVR 77 L+ ALTHRS + ++ NERLEFLGDS+L + +ALY P + EG++++ R+ +V Sbjct: 38 LRLALTHRSFAYENGGIPTNERLEFLGDSVLGLSVTDALYRDNPGLAEGELAKRRSAVVS 97 Query: 78 GNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLIL 137 LA +ARE +GE + LG GEL + G + SILADT+EAL G ++ +DI+T ++++ Sbjct: 98 TRALAGVARELGVGEFILLGQGELLTDGKNKASILADTMEALFGAAYICNDIETARQMVM 157 Query: 138 NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL 197 L + D KT +QE+ R L P V +G H + + + G Sbjct: 158 RLVGPLLADAGNFGAATDWKTNIQEHAANRQLG-PVRYEVTGQGPDHARTYQALLWIGGT 216 Query: 198 SEPVVGTGSSRRKAEQAAAEQALKKL 223 S G G S+++AEQ AA + +++ Sbjct: 217 SYQ-SGRGHSKKEAEQDAAANSWREI 241 >UniRef50_P74368 Ribonuclease 3 n=1 Tax=Synechocystis sp. PCC 6803 RepID=RNC_SYNY3 Length = 231 Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 14/214 (6%) Query: 25 QALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGN 79 +ALTHRS ++H +RLEFLGD++L +V+ L+ R+P E +++R+R+ LV N Sbjct: 17 EALTHRSYCNEHPGTPSYDRLEFLGDAVLGFVVGRILFERYPHFTEAELTRLRSQLVNQN 76 Query: 80 TLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNW 139 LA LAR + +RL + G SILAD E+L+G LD + VE I Sbjct: 77 QLAYLARFLHIAPEIRLSQSLARDDGQSSPSILADVFESLLGAALLDRGLTAVEDFIQEL 136 Query: 140 YQTRLDEISPGDKQKDP--------KTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 + L++ + P K+ LQ++ + LP Y ++ G H QEFT Sbjct: 137 FVPILEQWEKSQDGRSPKLVPTMDVKSMLQQWALAKTKQLPEYELINTSGPPHAQEFTFT 196 Query: 192 CQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 +V+G G+G S++ A + AA +ALK L L Sbjct: 197 VKVAGKIH-GQGSGPSKQIATKQAALEALKSLGL 229 >UniRef50_C8WGU4 Ribonuclease III n=2 Tax=Coriobacteriaceae RepID=C8WGU4_EGGLE Length = 281 Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 119/220 (54%), Gaps = 10/220 (4%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRFPRVD 64 Q LGY F ++LL A+TH SA+ + ERLEFLGDSIL ++A + RF +D Sbjct: 15 QEILGYRFADEQLLLSAITHPSATEGKSVKYSYERLEFLGDSILGAIVATIAFDRFHDLD 74 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG ++R++ LV G +L+++A + + G E +G S L + EA++ +F Sbjct: 75 EGGLTRIKVALVSGASLSDVAERLGFADVIVFGSSETGTGRRGLHSALENVYEAVVAALF 134 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 LD I+ E + R+ + ++PK+ LQE LQ + PTY +V+ +G H Sbjct: 135 LDGGIEAAEGFVRATLIPRMS-ADMAREPENPKSALQEKLQEDGIT-PTYKLVETQGPPH 192 Query: 185 DQEFTIHCQVSGLSEPVV-GTGSSRRKAEQAAAEQALKKL 223 D+ F QV S+ + GTG ++++AE AA+ L +L Sbjct: 193 DRTFV--AQVFAGSQGLARGTGRTKKEAESQAAKSTLARL 230 >UniRef50_UPI0000D54C0F dsRNA-specific ribonuclease n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54C0F Length = 183 Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 98/181 (54%), Gaps = 4/181 (2%) Query: 43 LGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK 102 +GD +L VIA L R+P+ EGD++R +A LV AE+A E L +R PG+ Sbjct: 1 MGDRVLGLVIAEELLARYPQEKEGDLARRQAELVSRRICAEIAAEVNLDAVIRCDPGQRG 60 Query: 103 SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQE 162 G +ILA+ EA++G V+LD +Q K+IL ++ RLD + D KT LQE Sbjct: 61 GGDTPARNILANGCEAVLGAVYLDGGLQVAAKVILALWRARLDAQTAAP--VDAKTELQE 118 Query: 163 YLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 + R +P Y +V G AH F + V G++ G G+SRR AEQAAA + L Sbjct: 119 WAMKRKHAMPAYEIVSQTGLAHAPTFHVSVTVLGVTAE--GEGASRRLAEQAAAAKCLHA 176 Query: 223 L 223 L Sbjct: 177 L 177 >UniRef50_Q53844 Ribonuclease 3 n=3 Tax=Mollicutes RepID=RNC_SPICI Length = 248 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 14/209 (6%) Query: 25 QALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGN 79 +ALTH S +++HN +R+EFLGD+IL+ I+ L+ FP +EG+++ +R+ +VR Sbjct: 34 EALTHNSYANEHNLSYTYQRMEFLGDAILAKEISLYLFLSFPDKNEGEITNLRSKIVREG 93 Query: 80 TLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNW 139 TLAEL R L LG GE+K+ G+ + ILAD E++I ++LD V I N Sbjct: 94 TLAELVRRMNWAPFLLLGKGEIKTKGYEKNRILADIYESMIAALYLDLGEDVVRTFINN- 152 Query: 140 YQTRLDEIS-PG--DKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG--EAHDQEFTIHCQV 194 T + +S PG DK +D KT LQE+LQ Y +++ E + +T+ ++ Sbjct: 153 --TLIRMVSNPGFFDKIRDYKTELQEFLQAGDARTLEYKLIKESQPLEGNRVLYTVVAEI 210 Query: 195 SGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G+ G G + ++AEQ AA AL+KL Sbjct: 211 GGIRYG-EGCGYTHKEAEQLAARDALQKL 238 >UniRef50_Q0C3T9 Ribonuclease III n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C3T9_HYPNA Length = 234 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 11/230 (4%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 + P + Q +G+ F +L++ALTH SA N+RLEFLGD +L+ +IA Sbjct: 5 LPPEALKEAQEIIGFKFKDAAILERALTHPSAIPPSGDTVKLSNQRLEFLGDRVLNLIIA 64 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 L R EGD++ LV+ AE R L + L E+ +GG RES L Sbjct: 65 ERLIERRQSDSEGDLAPRLNRLVKKGACAEAMRFLGLQRFILLSESEVAAGGHDRESTLG 124 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA+I ++ + + K I + + + + + KDPKT LQE+ QG+ PLP Sbjct: 125 DACEAVIAAIYQEGGLAAARKFIERAWAPQFENVP--AETKDPKTLLQEWAQGQGHPLPD 182 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 Y+V G H ++ + +++ TG S+R+AE+ AA L+ L Sbjct: 183 YVVTGRSGPDHAPQYEVEVRLA--VGKATATGPSKREAERHAAALMLRTL 230 >UniRef50_C0VZE3 Ribonuclease III n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZE3_9ACTO Length = 256 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 11/203 (5%) Query: 21 ELLQQALTHRS-----ASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 ELL ALTHRS + + NERLEFLGDS+LS ++ LY +P+ E ++SRMR + Sbjct: 34 ELLILALTHRSFAFEVGNIEPNERLEFLGDSVLSIIVTEYLYKNYPQSSEANLSRMRGAI 93 Query: 76 VRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKL 135 V TL+++AR LG+ + LG GE +GG R+SIL D EA+IG +L ++ ++ Sbjct: 94 VSEKTLSQVARNIRLGDFILLGKGENLTGGRDRDSILCDMTEAMIGATYLSHGLEATRRI 153 Query: 136 ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVS 195 + + L+ K D KT LQEY L P Y + G H + F V Sbjct: 154 VEYHLRPFLERAVELGKSSDYKTTLQEYCAEASLGEPIY-EAEGFGPDHARYFIATVTVG 212 Query: 196 GLSEPVVGTG--SSRRKAEQAAA 216 G +VG G SS++ A+ AA Sbjct: 213 G---ELVGHGQASSKKGAKSEAA 232 >UniRef50_B2SAD9 Ribonuclease 3 n=62 Tax=Rhizobiales RepID=RNC_BRUA1 Length = 245 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 8/216 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRS--ASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDE 65 L+ + G+ F + + L++ALTH S A ++ N ERLEFLGD +L +A L+ FP E Sbjct: 22 LEERTGHRFLNLKRLERALTHSSVQAPARANYERLEFLGDRVLGLTVAEMLFEAFPEASE 81 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRR-ESILADTVEALIGGVF 124 G++S LV T A +A E L + + G ++KS +R ++ AD VEALI ++ Sbjct: 82 GELSVRLNALVNAETCAAIADEIGLADLIHTG-SDIKSLNDKRLLNVRADVVEALIATIY 140 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 LD ++ I +++ R + G ++D KT LQE+ + P Y ++ G H Sbjct: 141 LDGGLEAARSFIQRYWKKR--SLETGAARRDAKTELQEWAHQQGNVHPVYAILSRSGPDH 198 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 D F + V G + P G G S+R AEQ+AAE L Sbjct: 199 DPLFLVEVTVKGFA-PEKGEGRSKRIAEQSAAEAML 233 >UniRef50_D0LAL1 Ribonuclease III n=11 Tax=Actinomycetales RepID=D0LAL1_GORB4 Length = 262 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 113/199 (56%), Gaps = 12/199 (6%) Query: 20 QELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 ++LL ALTHRS + ++ NERLEFLGDS+L VI LY +P EG+++++RA+ Sbjct: 23 EQLLTLALTHRSYAYENGGLPTNERLEFLGDSVLGVVITERLYLSYPDRPEGELAKIRAS 82 Query: 75 LVRGNTLAELAREF---ELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 +V + LA++AR LG L LG GE +GG ++SILAD +E+L G VF++ + T Sbjct: 83 VVNMHALADVARSLGPGGLGRHLYLGRGEEMTGGRDKDSILADGLESLFGAVFIEHGLAT 142 Query: 132 VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 +++IL + +D D KT LQE + L P Y + G H++EFT Sbjct: 143 SKRVILRLFDDVIDRAGTLGAGLDWKTSLQELSAEQGLGPPQYQISST-GPDHNKEFTAV 201 Query: 192 CQVSGLSEPVVGTGSSRRK 210 V+G S +G G R K Sbjct: 202 AVVAGES---LGNGVGRTK 217 >UniRef50_B0T3I0 Ribonuclease 3 n=3 Tax=Alphaproteobacteria RepID=RNC_CAUSK Length = 232 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 7/209 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSAS-----SKHNERLEFLGDSILSYVIANALYHR 59 + L+R++G+TF ++LL+ ALTH S + NE LEF+GD +L + A AL R Sbjct: 7 AVADLERRIGHTFADRKLLELALTHASVGDGAKKAGDNEVLEFIGDRVLGLLAAEALAER 66 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP+ EG+++ LV T A +AR E+G LRL K GG +SILA EAL Sbjct: 67 FPKAKEGELAPRLNALVSRETCARVARGAEMGPALRLSASSSKIGGRETDSILAGAAEAL 126 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 + ++ D ++ ++ L+ + D + G K +DPKT LQE+ Q + PLPTY V Sbjct: 127 MAALYRDGGLELARRVFLDLWAGEFDLANQG-KPRDPKTALQEWAQSQGKPLPTYAVKDR 185 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 +G H FT+ V GL +PV G SR Sbjct: 186 KGPDHAPMFTVQVTVVGL-DPVFAEGRSR 213 >UniRef50_B2UPF8 Ribonuclease III n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UPF8_AKKM8 Length = 231 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 112/208 (53%), Gaps = 8/208 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRFPRV 63 L+ KLGY FN+ +LL QALTH S SK ERLEFLGD+IL + LYH P+ Sbjct: 6 LEDKLGYRFNNPDLLVQALTHPSTDSKPETRRAYERLEFLGDAILQLAVTQYLYHHMPQS 65 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG+++++RA V L + L + + LG GE ++GG + SI+A+T E++ G + Sbjct: 66 PEGELTQLRARTVSRANLGKYGFILGLDKHIALGKGEERAGGRGKNSIIANTFESVFGAM 125 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 LDSD +T + + L LD + K+ +PK LQ LQ P+Y + +G Sbjct: 126 SLDSDYETAKAVALRVLHEALDSAASHPKEINPKGELQAILQDILPETPSY-ETEEKG-P 183 Query: 184 HDQEFTIHCQVSGLSEPV-VGTGSSRRK 210 D E +V + G+G+S+RK Sbjct: 184 RDAENRFESRVFWHGHAIGAGSGASKRK 211 >UniRef50_UPI00016C442D ribonuclease III n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C442D Length = 215 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 21 ELLQQALTHRSAS---SKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVR 77 ELL+ ALTH S++ + NERLEFLGDS+L V LY RFP EGD++++++ +V Sbjct: 2 ELLRSALTHTSSANTRAASNERLEFLGDSVLGLVTCEQLYRRFPEYQEGDLTKVKSAVVS 61 Query: 78 GNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLIL 137 T A ++E LG+ L LG G + S G +ILA+ E+L+ VFLD +L Sbjct: 62 RKTCARFSQEIRLGDFLFLGRG-VNSNGEMPLNILANAFESLVAAVFLDGGWDAARDFVL 120 Query: 138 NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL 197 ++ +D ++ + K++LQ Q + P Y ++ +G +++ F + QV Sbjct: 121 DFIDPEVDRVARDAISANAKSQLQTVTQREYGDTPRYFLLDEQGPDNNKCFKVAAQVHDE 180 Query: 198 SEPVVGTGSSRRKAEQAAAEQALKKLELE 226 P G ++++AE AA AL + E Sbjct: 181 RFP-AAWGHTKKEAELKAAMNALAHIHGE 208 >UniRef50_B5W3I4 Ribonuclease III n=3 Tax=Cyanobacteria RepID=B5W3I4_SPIMA Length = 395 Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 120/225 (53%), Gaps = 28/225 (12%) Query: 1 MNPIVINRLQRKLG-----YTFNHQELLQQALTHRSASSKH-------NERLEFLGDSIL 48 M+P +L+R+L F + +LL ALTH S +H NE LEFLGDS+L Sbjct: 154 MDPDREKKLRRELSKLLKKIPFQNVDLLNHALTHSSYLYEHPKEVKRDNELLEFLGDSVL 213 Query: 49 SYVIANALYHRFPRV-DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFR 107 +++ LY+++ V +EGD++++R+ LV LA+ A + L + +RLG G Sbjct: 214 NFISGEYLYNKYKSVRNEGDLTKLRSALVENKQLAKFAEKLALQQYIRLG-----KGAAL 268 Query: 108 RESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEIS------PGDKQKDPKTRLQ 161 S+L++T EA+IG FLDS ++ V++ + + + + EI+ G D K RLQ Sbjct: 269 NPSLLSNTFEAMIGAYFLDSGMKKVQEFLQPLFDSVIAEITSLSQGNSGKVAADSKNRLQ 328 Query: 162 EYLQGRHLPL-PTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTG 205 E++Q P+ P Y ++ G H ++FT+ V G V G G Sbjct: 329 EWVQKNIGPITPEYETIKEEGADHKKQFTVQVMVQG---KVYGEG 370 >UniRef50_Q2NJY3 Ribonuclease 3 n=14 Tax=Candidatus Phytoplasma RepID=RNC_AYWBP Length = 237 Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/210 (38%), Positives = 120/210 (57%), Gaps = 17/210 (8%) Query: 22 LLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 L +QALTH S S++ NERLEFLGD+I+ ++A+ LY + + DEG M++ RA Sbjct: 20 LYKQALTHSSYSNEQTPPQEDNERLEFLGDAIVGLLMADYLYSQ-SKEDEGIMTKKRAQA 78 Query: 76 VRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKL 135 V +L A++ EL L LG GE K+ F + I+ADT EAL G ++LD T +K+ Sbjct: 79 VCEKSLTIYAQKIELQNYLLLGKGE-KNKDFNAKGIMADTFEALFGAIYLDLGYLTAKKV 137 Query: 136 ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVS 195 ++ L ++ D KT+LQE +Q + Y +VQ +G AH + F Sbjct: 138 ---FHNIVLPHLAKTIYIIDFKTQLQEIVQSEKKTIQ-YKIVQEQGPAHSKNFVAEVY-- 191 Query: 196 GLSEPVVGT--GSSRRKAEQAAAEQALKKL 223 L + ++GT GS+++ AEQ AA+QAL K+ Sbjct: 192 -LEKNLLGTGEGSTKKSAEQKAAQQALSKV 220 >UniRef50_C7MDJ8 RNAse III n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDJ8_BRAFD Length = 250 Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/215 (37%), Positives = 116/215 (53%), Gaps = 12/215 (5%) Query: 14 GYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 G LL+ +LTHRS S + HNERLEFLGD++L + LY P + EGD+ Sbjct: 27 GADLQDSGLLELSLTHRSYSYENDGLPHNERLEFLGDAVLQLAVTEHLYAAHPTLPEGDL 86 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD 128 +R RA V LA +A + +LG +RLG GE +GG + SILADT EA+IG V L Sbjct: 87 ARRRAATVSTRALAVIASKLDLGAYVRLGRGEDLTGGRAKASILADTTEAVIGAVHLALG 146 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEY--LQGRHLPLPTYLVVQVRGEAHDQ 186 + +L+ + LD + D K+RLQE +G ++ TY + + G H + Sbjct: 147 QDVSRRFVLDLLRPLLDSDEFLEAGYDFKSRLQEIAAAEGENV---TYALSE-SGLEHQK 202 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 +T V G+ G G+S++ AE AAA+ A++ Sbjct: 203 VYTATVTVPGIV-TARGDGASKKDAELAAAQNAVR 236 >UniRef50_UPI0001C16B2C Ribonuclease III n=2 Tax=Nostocaceae RepID=UPI0001C16B2C Length = 276 Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 11/203 (5%) Query: 5 VINRLQRKLG--YTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANAL 56 +IN + +K+ F ++LL+QALTHRS +++ HNERLEFLGD+IL+++ L Sbjct: 42 IINYIDKKMHKLLIFEDEKLLRQALTHRSYANENPSEGDHNERLEFLGDAILNFISGEYL 101 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 Y R+P+ E +++R R+ LV LA+ A E L +RLG G ++ GG++ ++L+ T Sbjct: 102 YSRYPQKGEDELTRRRSALVEEKQLAKFALEVGLNVKMRLGKGTIQDGGYQNPNLLSSTF 161 Query: 117 EALIGGVFLDS--DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP-LPT 173 EA+IG +LD+ +I+ V+ + + D K R QE++Q + P Sbjct: 162 EAIIGAYYLDNNCNIEAVKLAVEPLFDFVSQHTIESRYNVDSKNRFQEWVQKKLCANPPK 221 Query: 174 YLVVQVRGEAHDQEFTIHCQVSG 196 Y Q+ G H EF V G Sbjct: 222 YKTQQIGGSPHLPEFFSRVLVDG 244 >UniRef50_B1XKP4 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XKP4_SYNP2 Length = 258 Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 12/191 (6%) Query: 17 FNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 F LL QALTHRS +++ NERLEFLGD++L +++ LY R+P EG++SR Sbjct: 7 FQRSPLLLQALTHRSFANEQPETIQDNERLEFLGDAVLKFIMGKLLYERYPDFQEGELSR 66 Query: 71 MRATLVRG-NTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 +RA+L + LAE A+ L + LRLG G K G + IL++T EA++G FLD+ I Sbjct: 67 LRASLENNRHQLAEFAQVLGLDQILRLGKGAEKEGARQNPEILSNTFEAVVGAYFLDAGI 126 Query: 130 QT----VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 + VE L++ RL + ++ K +LQE+ H +P Y + G H Sbjct: 127 EAAIAFVETLVIP-VADRLVQQPSDPLAQNFKGQLQEWALANHGEIPKYKTLNESGADHA 185 Query: 186 QEFTIHCQVSG 196 + FT+ + G Sbjct: 186 KTFTVAVYLQG 196 >UniRef50_Q2RJX2 Ribonuclease 3 n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RNC_MOOTA Length = 233 Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 6/173 (3%) Query: 21 ELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 E L ALTH + + +H N+RLEFLGD++L V+A LY FP++ EGD++RMRA + Sbjct: 24 EGLDLALTHPTYAFEHHLPGDNQRLEFLGDAVLGLVVATYLYQHFPQLPEGDLTRMRAAV 83 Query: 76 VRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKL 135 V +L ++AR +G+ LRLG GE SGG R S LAD +EA+IG V+L + Sbjct: 84 VCEASLVKVARRLRVGDLLRLGQGEEHSGGRERPSNLADAMEAIIGSVYLSGGYELARDF 143 Query: 136 ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEF 188 +L + L EI D K+ LQE++Q + Y +++ G H + + Sbjct: 144 VLQIFTPAL-EILSDTSFIDSKSALQEFVQSQGTENVVYKILEEWGPDHAKGY 195 >UniRef50_Q049R1 DsRNA-specific ribonuclease n=4 Tax=Lactobacillus delbrueckii RepID=Q049R1_LACDB Length = 231 Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 121/227 (53%), Gaps = 15/227 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 I L K G F LL++A TH S +++ E+LEFLGD++L + +++ LY Sbjct: 7 IKMLDEKYGIRFKDVRLLEEAFTHSSYLNENPGKTLGNYEKLEFLGDAVLEFTVSDYLYR 66 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 F ++EG+++R+R+ +VR +++A + E + LG GE K+GG +R+++L D EA Sbjct: 67 HFQHLNEGELTRLRSNIVRTEGFSKVALDCGFKEEINLGVGEEKAGGRKRKALLEDVFEA 126 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPG--DKQKDPKTRLQEYLQGRHLPLPTYLV 176 G +FLD I+ VEK + QT I+ G +D KT LQE LQ Y V Sbjct: 127 FNGALFLDQGIEAVEKFL---SQTVYPLIAAGYFTPSRDFKTDLQELLQQNGSVTIEYRV 183 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + + F + V G + G G +++KAEQ AA AL+ L Sbjct: 184 LNESQQP--PHFEVEVLVDG-KKLASGEGRNKKKAEQDAASHALEHL 227 >UniRef50_Q8Z023 Ribonuclease 3 n=10 Tax=Cyanobacteria RepID=RNC_ANASP Length = 228 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 10/202 (4%) Query: 17 FNHQELLQQALTHRS------ASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 F +LL++ALTHRS +HNERLEFLGD+IL+++ LY P E +++R Sbjct: 7 FRDDKLLRRALTHRSYVNENPEEGEHNERLEFLGDAILNFLSGEYLYRSHPDRGEDELTR 66 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD--SD 128 R+ LV LA+ A E L +RLG G ++ GG++ ++L+ T EA+IG +LD S+ Sbjct: 67 RRSALVDEKQLAKFAIEVGLDFKMRLGKGAIRDGGYQNPNLLSSTFEAVIGAYYLDNNSN 126 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL-PTYLVVQVRGEAHDQE 187 I+ V +I +++ ++I D K R QE++Q P P YL Q+ G +H E Sbjct: 127 IEAVRAIIEPLFESVPEQIVVVRSNVDSKNRFQEWVQRNIGPTPPKYLTEQIGGFSHAPE 186 Query: 188 FTIHCQVSGLSEPVVGTGSSRR 209 F V G E G G +++ Sbjct: 187 FKATVLV-GEKEYGEGIGKNKK 207 >UniRef50_C1ZAX4 RNAse III n=2 Tax=Planctomycetaceae RepID=C1ZAX4_PLALI Length = 263 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 124/226 (54%), Gaps = 9/226 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALYHRF 60 + + + +LGY F ELL QAL+H SA+ + NERLEFLGD+IL + + L+ ++ Sbjct: 8 VPLTECEARLGYHFRSPELLMQALSHASAAKTRLESNERLEFLGDAILGAAVCDLLFRKY 67 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P+ EG+++R+++ +V + LA+E L + + +G G + SIL+ T E++I Sbjct: 68 PKSTEGELTRIKSFVVSRHVCGLLAKELHLDQFVIIGKGLCGTPNVPV-SILSATFESVI 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 VFLD ++ I+ + ++++ + ++ K+ LQ+Y Q P Y +++ Sbjct: 127 AAVFLDGGFDAAKEFIIRLIEPHVEQMVGAEYGRNYKSVLQQYAQKTLGETPRYDLLKEY 186 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGT--GSSRRKAEQAAAEQALKKLE 224 G H + F + + L E V G ++++AEQ AA AL +LE Sbjct: 187 GPDHLKYFKVS---AALGEVVYAAAWGINKKEAEQKAAANALSELE 229 >UniRef50_B4S3N5 Ribonuclease III n=2 Tax=Chlorobiaceae RepID=B4S3N5_PROA2 Length = 277 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 16/206 (7%) Query: 21 ELLQQALTHRS-----------ASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 ++ + A THRS A N+RLEFLGD++L +I+ LY FP DEG +S Sbjct: 56 DIYKTAFTHRSFVHDQHQGSSPAPFDSNQRLEFLGDAVLDLIISEHLYKLFPESDEGALS 115 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 R+ +V +LA+ A+ LG L +G + + E+ +AD EALIG ++LD + Sbjct: 116 STRSKIVNRKSLADFAQAIALGNQLIIGESADEEKIRKSEATMADAFEALIGAIYLDKGL 175 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 V++ I + T +D + + K+RL E+ Q L P Y +++ G H + FT Sbjct: 176 PAVQRFIDDHVMTIVDVPKLATIEHNHKSRLIEFAQANQLSHPQYTIIREEGAEHQKTFT 235 Query: 190 IHCQVSGLSEPVVGTGSSRRK--AEQ 213 + G +P GTG++ RK AEQ Sbjct: 236 VEVSFDG--KP-FGTGTAARKKDAEQ 258 >UniRef50_Q1AW81 RNAse III n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW81_RUBXD Length = 233 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 22/207 (10%) Query: 22 LLQQALTHRSASSKH--NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGN 79 L ++ALTH S + + N RLEFLGDSIL++ +A ++H +P + EGD++R+RA LVR + Sbjct: 28 LRKRALTHPSVADPYHSNGRLEFLGDSILNHRVAELVFHSYPELLEGDLTRIRAHLVRKS 87 Query: 80 TLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL-DSD--IQTVEKLI 136 LA + R L E + +S++ADTVEA+IG +L D + ++T+++ I Sbjct: 88 FLASVGRSEGLEEMIE--------SSVINDSVIADTVEAIIGAAYLIDKNLVLRTIDE-I 138 Query: 137 LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSG 196 N + DE+ +D KT LQE LQ L PTY V+ +G H F V G Sbjct: 139 FNPAEVDTDEL------RDWKTLLQETLQAEGL-RPTYRVISKQGPPHRPVFISGVSVDG 191 Query: 197 LSEPVVGTGSSRRKAEQAAAEQALKKL 223 E G GSS +++EQAAA AL+ L Sbjct: 192 -EEVATGRGSSIKQSEQAAARAALEIL 217 >UniRef50_A9BIG2 Ribonuclease III n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIG2_PETMO Length = 253 Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 15/215 (6%) Query: 20 QELLQQALTHRSASSKH---------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 + +L +AL H+S + NERLEFLGD++L VI+ LY+ + + EG+MS+ Sbjct: 32 ESVLFEALCHKSYVFDNENIQRKLDSNERLEFLGDAVLELVISEFLYNNY-HLSEGEMSK 90 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 RA + LAE+A + L + + L GE K GG ++SIL+DT+EAL ++L + Sbjct: 91 ARAIIGSEIILAEVALKLRLDDFIFLSKGEDKQGGRTKKSILSDTMEALFACIYLSCGYE 150 Query: 131 TVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 +K I+ + ++ G+ D KT+LQE Q + LP Y+++ G +H + + + Sbjct: 151 KAKKYIIKNMKEYIENAVEGNIFLDYKTKLQELTQEKTKKLPEYVLLSASGPSHMKRYKV 210 Query: 191 HCQVSGLSEPVVGTGS--SRRKAEQAAAEQALKKL 223 + L + ++G G S++ AEQ AA+ A +K Sbjct: 211 AVK---LDDEILGIGEGFSKKFAEQLAAKIACEKF 242 >UniRef50_A9A9D4 Ribonuclease III n=4 Tax=Methanococcus maripaludis RepID=A9A9D4_METM6 Length = 229 Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 124/228 (54%), Gaps = 19/228 (8%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRF 60 +L KL FN + ++A H S ++ NERLE+LGD++L +I+ L+ + Sbjct: 6 KLLSKLDIKFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLELIISEYLFKQ- 64 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 + EG+MS++RA V + L A++ + + LG GEL S G+ + +I++D EA I Sbjct: 65 ENLSEGEMSKLRAKYVCESALFTYAKKLKFDNYVLLGKGELISKGYNKPAIVSDVFEAFI 124 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD + + +K + N ++E S + D KT+LQE+ + + + Y+ ++ Sbjct: 125 AAIYLDQGLNSAKKFVYNHILPIIEE-SSKELFIDYKTKLQEFPELINKSI-NYVNLEEA 182 Query: 181 GEAHDQEFTIHC----QVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 GE HD++F + ++ G G G S+++AE AA+ AL KLE Sbjct: 183 GEPHDKKFVVAVKQDRKILG-----KGIGKSKKEAEMKAAKNALLKLE 225 >UniRef50_C1F8X7 Ribonuclease III n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8X7_ACIC5 Length = 302 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 130/263 (49%), Gaps = 47/263 (17%) Query: 9 LQRKLGYTFNHQELLQQALTH----------------------------RSASSKHNERL 40 L+ LGYTF + LL +ALTH R + + NE+L Sbjct: 20 LEAALGYTFQDKGLLARALTHSSLAYEQTAQTATPAAARATGKSSEARTRRSPLEDNEQL 79 Query: 41 EFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGE 100 EFLGD++L ++A ALY P + EG ++R+R+ LV + ++A LG LR+G GE Sbjct: 80 EFLGDAVLGLIVAEALYRAHPEMSEGQLTRLRSALVSRKHMGQVAHRLHLGTYLRMGRGE 139 Query: 101 LKSGGFRRESILADTVEALIGGVFLDS--------DIQTVEKLILNWY------QTRLDE 146 +SGG ++ ++LA+ EALI V+LD+ T + I+ + + L E Sbjct: 140 ERSGGRKKPALLANAAEALIAAVYLDAAGITGPCETALTAARAIIERHVIEPSLPSLLQE 199 Query: 147 ISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEP-----V 201 S G D K+ LQE+LQ H P Y+V G H + F + ++ G + Sbjct: 200 ASRGTSIGDHKSALQEFLQSEHRGQPEYVVTGQSGPDHHKRFLVEVRLPGKAGAPGTALA 259 Query: 202 VGTGSSRRKAEQAAAEQALKKLE 224 G G +++ AEQ AA +AL+KL+ Sbjct: 260 RGIGGTKKHAEQEAARRALRKLQ 282 >UniRef50_Q83I82 Ribonuclease 3 n=2 Tax=Tropheryma whipplei RepID=RNC_TROW8 Length = 223 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 13/196 (6%) Query: 22 LLQQALTHRSAS-----SKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLV 76 LL+ A H+S S ++NERLEFLGD++L V+++ L+ P EG +S R+ +V Sbjct: 20 LLRTAFVHKSFSFENGACQNNERLEFLGDAVLGLVVSHYLFETCPEYTEGQLSAARSYIV 79 Query: 77 RGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLI 136 G ++A++A+E LG+ + LG GE +GG + S+LAD +E+LIG V +D ++ + Sbjct: 80 SGTSIAQIAKELNLGQFMLLGKGEKLAGGMDKTSLLADLLESLIGAVMVDQGFESARDFV 139 Query: 137 LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSG 196 L +L ++ DPKT+LQ+ + T LV +V E T V Sbjct: 140 LALVGEKLRQVGEFSVD-DPKTKLQKLTR-------TQLVYEVVTEGPPHSRTFKASVIV 191 Query: 197 LSEPVVGTGSSRRKAE 212 + G GSS+++A+ Sbjct: 192 NEKRFFGQGSSKKQAQ 207 >UniRef50_Q1GTU3 Ribonuclease 3 n=1 Tax=Sphingopyxis alaskensis RepID=RNC_SPHAL Length = 226 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 95/199 (47%), Gaps = 6/199 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61 +P+ L +G + L ALTH S +RLEFLGD +L V+A+ LY RFP Sbjct: 3 DPLNTEALADIIGCIPDDLTLYDLALTHGSTGRADYQRLEFLGDRVLGLVLASELYTRFP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG+MS L G T A +A+ +L +R G GG ++I AD +EALIG Sbjct: 63 AASEGEMSSRLHVLASGATCAAIAQRLDLPALIRFGAQARSDGGRHSDNIAADAIEALIG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRLD--EISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +FL+ I+ IL + +D + +P K PK LQE+ R P Y +V Sbjct: 123 ALFLERGIEAARTFILAQWGALIDGQQAAP----KHPKAALQEWALARGRRPPEYEIVSR 178 Query: 180 RGEAHDQEFTIHCQVSGLS 198 G H F I + L+ Sbjct: 179 EGPDHAPRFRIAVSIGKLA 197 >UniRef50_A3EQH6 Ribonuclease III n=3 Tax=Leptospirillum RepID=A3EQH6_9BACT Length = 377 Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 40/259 (15%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN--------ERLEFLGDSILSYVIAN 54 P L R LG F +++ALTHRSAS + ERLEFLGD ++ +++ Sbjct: 15 PRAPEHLIRILGLPFKPTMRIEEALTHRSASHERGRKTPIPNYERLEFLGDRVIGLIVSE 74 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 L + +P EGD+ ++ + +V TLA +AR +LG + LG G SG S+LAD Sbjct: 75 YLLNTWPSASEGDIGQIFSGIVSTQTLASIARRMDLGSYMILGKGSHSSGDRENSSLLAD 134 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEI---------------SPGDK----QKD 155 T E+L ++L+ ++T ++++ W+ L EI PG Q Sbjct: 135 TFESLAAAIYLEYGLETCRQVLIPWFTQPLIEIVQKIENLREIRDSSSGPGSSVIATQPA 194 Query: 156 P--------KTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSG--LSEPVVGTG 205 P K LQ++ Q + LP Y V++ G AH + F + + G L E G Sbjct: 195 PPRAGSLNYKLLLQKWCQSKAEELPVYQVLEEIGPAHQRRFRLGVFLKGKQLGE---AEG 251 Query: 206 SSRRKAEQAAAEQALKKLE 224 +++R A AA+ A ++++ Sbjct: 252 TTKRGASVHAAKNAWERIQ 270 >UniRef50_Q7UGZ7 Ribonuclease 3 n=1 Tax=Rhodopirellula baltica RepID=RNC_RHOBA Length = 266 Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 5/221 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALYHRFPR 62 I R Q LGY F +LL+ ALTH S +S NERLEFLGDS+L + L++ +P Sbjct: 34 IERCQEILGYDFRDLDLLRSALTHASGASHRLASNERLEFLGDSVLGLTVCEWLFNEYPE 93 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EGD++++++ +V + ++A + L +CL +G G ++ + + S+++D EA+I Sbjct: 94 YSEGDLTKIKSAVVSRRSCGKVACKLGLDQCLIVGRGVTRNRSYPK-SLVSDVFEAVIAA 152 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +++D + V + W ++ + K+ LQ++ Q P Y +++ G Sbjct: 153 LYIDGGPEIVRDRLKLWLAEEVNLAVDTQGSGNHKSVLQQFAQRELSATPVYKLIRETGP 212 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H + F + V G++++ AEQ AA AL +L Sbjct: 213 DHRKMFLMGAMVDD-RRFAPAWGNNKKDAEQRAAANALAEL 252 >UniRef50_C3Y2N8 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y2N8_BRAFL Length = 1490 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 119/231 (51%), Gaps = 13/231 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 + + + G F H LL +A THR+ HN+RLEFLGDS++ V + LY F Sbjct: 1199 LTEFESRCGMEFKHVRLLARAFTHRTVGFNNLTLGHNQRLEFLGDSVMQMVSSEYLYKHF 1258 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFR-RESILADTVEAL 119 P EG +S +R++LV T A ++++ + E + + + + G R+ LAD +EA Sbjct: 1259 PDHHEGHLSLLRSSLVNNRTQALVSQDLGMEEYI-ISSDKARQGKLSLRQKTLADLMEAF 1317 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTY 174 +G +++D ++ V + + RL E + DPK++LQ+ +G+ +P Y Sbjct: 1318 MGALYVDQGLEYVCVFMNVCFFPRLREFIMNQEWNDPKSQLQQCCLTLRTEGKEPDIPFY 1377 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 ++ G +H +++T+ G G GSS ++AE AAA ALK + Sbjct: 1378 KILDKAGPSHARKYTVAVYFKG-ERIGTGVGSSIQQAEMAAARDALKNYKF 1427 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 4/104 (3%) Query: 36 HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLR 95 HNERLEFLGD+++ ++ ++ LY FP ++EG ++ R +V+ LA LA++ L E + Sbjct: 1089 HNERLEFLGDAVVEFLTSSHLYFMFPDLEEGGLATYRTAIVQNQHLAVLAKKLRLDEFML 1148 Query: 96 L--GPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLIL 137 GP + R +A+ +EALIG +++ ++ +KL Sbjct: 1149 YAHGPDLCRESDLRH--AMANCLEALIGAMYMQQGLEETKKLFC 1190 >UniRef50_B6W6L3 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W6L3_9FIRM Length = 228 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 100/186 (53%), Gaps = 8/186 (4%) Query: 13 LGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 +GY+F ++ L+ ALTH S + NERLEFLGDSIL V++ LY E Sbjct: 18 IGYSFKNKNLIDVALTHSSYINESKDKNRSSNERLEFLGDSILDLVVSEELYKNHKSYPE 77 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G ++++R+ +V ++ ++ + +F L L G GE+ G ++S+ ADT EA ++L Sbjct: 78 GKLTKIRSRIVCTSSFSKASEKFNLSSYLLFGKGEISHNGREKKSVKADTFEAFCAAIYL 137 Query: 126 DSDIQTVEKLIL-NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 D+ ++ ++ N+YQT + + D KT+LQEY + + Y + + G H Sbjct: 138 DAGYVFLKNFLMENYYQTVKELLENDLLFIDYKTKLQEYFNKTNRTILKYKLAKEEGPEH 197 Query: 185 DQEFTI 190 ++ F + Sbjct: 198 NKTFYM 203 >UniRef50_Q4FLS9 Ribonuclease 3 n=3 Tax=Candidatus Pelagibacter RepID=RNC_PELUB Length = 222 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 7/206 (3%) Query: 17 FNHQELLQQALTHRSASS-KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 F+ Q++ ++LTH+S S +NE++EFLGD +L +IA L +P EG + + A+L Sbjct: 16 FSDQKIFIKSLTHKSFDSINNNEKIEFLGDRVLGLIIAKKLLELYPDEKEGVLDKKFASL 75 Query: 76 VRGNTLAELAREFELGE-CLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEK 134 V E+A++ EL + L L P K + I+AD +EALIG ++LD + E+ Sbjct: 76 VNKKKCLEIAKKIELEKYILVLNPKNKKIE--IEDKIVADCLEALIGAIYLDKGLNFTER 133 Query: 135 LILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQV 194 ILN + + + Q D KT+LQEY LP Y ++ G H F + ++ Sbjct: 134 FILNLWSEHIT--ASVITQIDAKTKLQEYSLKIFKVLPIYKLISNTGPRHKPLFKVAVKL 191 Query: 195 SGLSEPVVGTGSSRRKAEQAAAEQAL 220 ++ G+S++ AEQ AA L Sbjct: 192 KN-TKFFTAEGTSKKDAEQNAASLCL 216 >UniRef50_UPI000180B1D8 PREDICTED: similar to ribonuclease III, nuclear, partial n=1 Tax=Ciona intestinalis RepID=UPI000180B1D8 Length = 1224 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 15/237 (6%) Query: 3 PIV--INRLQRKLGYTFNHQELLQQALTHRSA-----SSKHNERLEFLGDSILSYVIANA 55 PI+ + + + +G FNH LL +A T R+ + HN+RLEFLGDS+ + V + Sbjct: 958 PILQKLTKFEDSIGVKFNHIRLLAKAFTWRNVHENILTHGHNQRLEFLGDSVCNLVASAY 1017 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL--RLGPGELKSGGFRRESILA 113 L+ +P EG ++ +RAT+V G T + +A E + E + L + RE LA Sbjct: 1018 LFKLYPTHHEGHLTLLRATVVNGRTQSLVATELGMPEYVICTLDNDSTERVPEWREKNLA 1077 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRH 168 D +EA + +F+D ++ V+ + + RL E + DPK+ LQ+ +G+ Sbjct: 1078 DLLEAFVAALFIDKGLKYVKTFMKICFFPRLKEFILTQEWNDPKSCLQQCCLTLRQEGKE 1137 Query: 169 LPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 LPTY + G +H +++ + G E GTG S ++AE+ AA AL + Sbjct: 1138 PQLPTYEISHQTGPSHSRKYVVTVHFKG-EEIGKGTGESIQRAERNAARTALNQYNF 1193 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 4/104 (3%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 +HNERLEFLGD+++ Y + L+ FP + EG ++ R LV LA LA +L E + Sbjct: 819 EHNERLEFLGDAVVGYFTSVHLFLLFPDLSEGALTTFRTVLVNNQHLALLAERLQLDEFM 878 Query: 95 RL--GPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLI 136 GP + R +A+ EAL+G +++++ ++ ++L Sbjct: 879 LYAHGPDLCRKADLRH--AMANCFEALMGAIYMEAGLERAQRLF 920 >UniRef50_D1Y4H6 Ribonuclease III n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4H6_9BACT Length = 231 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 120/221 (54%), Gaps = 15/221 (6%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRV 63 QR++GY F+ LL++ALTH S + + NERLEFLGD++L +I+ L+ P Sbjct: 15 FQRRIGYEFSDPALLEEALTHSSYAHERGVPFWNERLEFLGDAVLEVLISEELFRARPDA 74 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG M+R RA+LVR L+ L L LG G+ S E+++ D VEALIG + Sbjct: 75 SEGQMTRERASLVREEVLSAWGHSLGLDGLLLLGMGQRGSAS---ENMIGDAVEALIGAL 131 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 +LD ++ + LN +Q DPK+RLQ Q R+ P P Y +++ +G Sbjct: 132 YLDGGLEQA-RAFLNRRPR-----GAAREQLDPKSRLQILCQERNGPAPYYELLERKGPE 185 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 HD F + G E G G+SR+ AEQAAA ALK +E Sbjct: 186 HDPIFIARALLDG-RELARGRGTSRKAAEQAAARAALKLIE 225 >UniRef50_B2V6U0 Ribonuclease III n=4 Tax=Hydrogenothermaceae RepID=B2V6U0_SULSY Length = 249 Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 111/198 (56%), Gaps = 9/198 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNER------LEFLGDSILSYVIANALYHR 59 + +L++ +GYTF + LL A+THRS ++++++ LEFLGD+++S +I+ L + Sbjct: 21 VKQLEQIIGYTFKDKSLLLAAITHRSFVAEYHKKIPDYEVLEFLGDAVISLIISEILIKQ 80 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EG++S+ R+ +V L++LAR + + + GE G RES+L D EA+ Sbjct: 81 FPHAREGELSQYRSAIVSEAYLSKLARNIYFQDFVLISKGEKSQKGAERESLLCDVFEAV 140 Query: 120 IGGVFLDSDIQ-TVEKLIL--NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 G ++ D + + I N+ + +++I + +D K+ LQ Q + +PTY + Sbjct: 141 FGAIYTDCQYNLDIPREIFNKNFKEIVINDIQQENLPRDYKSLLQIETQRLYGKIPTYKL 200 Query: 177 VQVRGEAHDQEFTIHCQV 194 + G HD+ FT+ C V Sbjct: 201 ISSEGPEHDKTFTVECHV 218 >UniRef50_Q4A589 Ribonuclease 3 n=1 Tax=Mycoplasma synoviae 53 RepID=RNC_MYCS5 Length = 231 Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 116/214 (54%), Gaps = 12/214 (5%) Query: 17 FNHQELLQQALTHRSAS-----SKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRM 71 + + +L +A TH++ S SK ERLEFLGDS++ ++I++ F ++ G++SR+ Sbjct: 23 YKNIDLFIEATTHKTYSKVNKNSKDYERLEFLGDSLVGFLISDYCVREFSSLEPGELSRL 82 Query: 72 RATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 R+ LV L ++A++ ++ + ++ GP + ++ ++L+D VEALI ++LD +Q+ Sbjct: 83 RSKLVDKLALFKIAQKLKVEQIIKTGPKKARNEVLSSSNVLSDVVEALIAAIYLDQGMQS 142 Query: 132 VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 + I + + + + KDPK+ LQEY Q Y +++ + + H Sbjct: 143 AKDFIKSHF-YEIANKAQNKPNKDPKSELQEYFQTISAETVKYETIEIPNKRSFESKAWH 201 Query: 192 C-QVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 ++ G G G S++ AE+ AA AL KL+ Sbjct: 202 LNKIYG-----TGVGLSKKDAEKNAAANALSKLK 230 >UniRef50_Q03VW5 Ribonuclease 3 n=9 Tax=Lactobacillales RepID=RNC_LEUMM Length = 236 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 12/166 (7%) Query: 11 RKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFPRV 63 +K +FN + LL +ALT R+ ++H +RLEFLGDS++ ++A L+ R+P Sbjct: 12 KKFNISFNDESLLTEALTQRNYLNEHPDEKGRDYQRLEFLGDSVMQMIVAEYLFKRYPDW 71 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG ++ MR +V+ + A +R L E +RLG GE SG R+S+L D EA IG + Sbjct: 72 HEGQLTEMRIAMVQTRSFAHFSRMVHLNEGIRLGKGEEMSGARDRDSLLEDIWEAFIGAL 131 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPG--DKQKDPKTRLQEYLQGR 167 +LD V + + QT I D+ D K+RLQE LQ + Sbjct: 132 YLDQGADVVRQFL---NQTLFAAIDTDFFDRFIDFKSRLQERLQTK 174 >UniRef50_Q6PF88 Rnasen protein (Fragment) n=15 Tax=Coelomata RepID=Q6PF88_MOUSE Length = 942 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G F H LL +A T R+ H N+R+EFLGDSI+ V L+ F Sbjct: 675 LTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHF 734 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++ +R++LV T A++A E + E + + K R LAD +E+ I Sbjct: 735 PDHHEGHLTLLRSSLVNNRTQAKVAEELGMQE-YAITNDKTKRPVALRTKTLADLLESFI 793 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 +++D D++ V + + RL E DPK++LQ+ +G+ +P Y Sbjct: 794 AALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYK 853 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +Q G +H + +T+ G G G S ++AE AA AL+K Sbjct: 854 TLQTVGPSHARTYTVAVYFKG-ERIGCGKGPSIQQAEMGAAMDALEK 899 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 4/103 (3%) Query: 36 HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLR 95 HNERLEFLGD+++ ++ + LY+ FP ++EG ++ R +V+ LA LA++ EL + Sbjct: 532 HNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFML 591 Query: 96 L--GPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLI 136 GP + R +A+ EALIG V+L+ ++ ++L Sbjct: 592 YAHGPDLCRESDLRHA--MANCFEALIGAVYLEGSLEEAKQLF 632 >UniRef50_A5UJK3 Ribonuclease III (DsRNA-specific), Rnc n=2 Tax=Methanobrevibacter smithii RepID=A5UJK3_METS3 Length = 223 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 17/214 (7%) Query: 22 LLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLV 76 L A TH S +KH ERLEFLGDS+L+ +++ LY ++P +EG ++++RA V Sbjct: 16 LYDVAFTHGSYGTKHGLDYTYERLEFLGDSVLNMIVSEYLYKQYPDYEEGKLTKLRANYV 75 Query: 77 RGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ----TV 132 L + E L + +++ + K SI AD E+ +G +FLD I+ + Sbjct: 76 CQTALIYYSHELGLDKHIKIYGDDSKITENEVLSITADVFESFLGAIFLDQGIEFAKDYI 135 Query: 133 EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHC 192 K+I + + D K+ ++EY + + + Y ++ G H++ F I Sbjct: 136 SKIIFPYIDAKKVFFF------DYKSVIKEYGDAQEVDIE-YKIIDECGVPHNKTFIISI 188 Query: 193 QVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + G E VG G ++++AEQAA++QA+KKL+++ Sbjct: 189 LIDG-KEMGVGKGKNKKEAEQAASKQAMKKLKIQ 221 >UniRef50_Q9NRR4 Ribonuclease 3 n=53 Tax=Eumetazoa RepID=RNC_HUMAN Length = 1374 Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 12/230 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G F H LL +A T R+ H N+R+EFLGDSI+ V L+ F Sbjct: 1107 LTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHF 1166 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++ +R++LV T A++A E + E + + K R LAD +E+ I Sbjct: 1167 PDHHEGHLTLLRSSLVNNRTQAKVAEELGMQE-YAITNDKTKRPVALRTKTLADLLESFI 1225 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 +++D D++ V + + RL E DPK++LQ+ +G+ +P Y Sbjct: 1226 AALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYK 1285 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 +Q G +H + +T+ G G G S ++AE AA AL+K Sbjct: 1286 TLQTVGPSHARTYTVAVYFKG-ERIGCGKGPSIQQAEMGAAMDALEKYNF 1334 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 4/103 (3%) Query: 36 HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLR 95 HNERLEFLGD+++ ++ + LY+ FP ++EG ++ R +V+ LA LA++ EL + Sbjct: 964 HNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFML 1023 Query: 96 L--GPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLI 136 GP + R +A+ EALIG V+L+ ++ ++L Sbjct: 1024 YAHGPDLCRESDLRH--AMANCFEALIGAVYLEGSLEEAKQLF 1064 >UniRef50_UPI0001553722 PREDICTED: similar to ribonuclease III, nuclear n=1 Tax=Mus musculus RepID=UPI0001553722 Length = 1241 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G F H LL +A T R+ H N+R+EFLGDSI+ V L+ F Sbjct: 972 LTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHF 1031 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++ +R++LV T A++A E + E + + K R LAD +E+ I Sbjct: 1032 PDHHEGHLTLLRSSLVNNRTQAKVAEELGMQE-YAITNDKTKRPVALRTKTLADLLESFI 1090 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 +++D D++ V + + RL E DPK++LQ+ +G+ +P Y Sbjct: 1091 AALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYK 1150 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +Q G +H + +T+ G G G S ++AE AA AL+K Sbjct: 1151 TLQTVGPSHARTYTVAVYFKG-ERIGCGKGPSIQQAEMGAAMDALEK 1196 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Query: 36 HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLR 95 HNERLEFLGD+++ ++ + LY+ FP ++EG ++ R +V+ LA LA+ + Sbjct: 830 HNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKSLSF-LIYK 888 Query: 96 LGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLI 136 +G + + T ++L+G V+L+ ++ ++L Sbjct: 889 VGSTLASTHMLLLIHSVMLTDQSLLGAVYLEGSLEEAKQLF 929 >UniRef50_O01326 Ribonuclease 3 n=3 Tax=Caenorhabditis RepID=RNC_CAEEL Length = 1086 Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 15/227 (6%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRV 63 L+ +LG FN+ LL +A T R+ + HN+RLE+LGDS+L ++++ LY RFP Sbjct: 836 LEERLGIQFNNIRLLAKAFTRRNIPNNDLTKGHNQRLEWLGDSVLQLIVSDFLYRRFPYH 895 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG MS +R +LV T A + + E + P + + + AD VEA IG + Sbjct: 896 HEGHMSLLRTSLVSNQTQAVVCDDLGFTEFVIKAPYKTPELKLKDK---ADLVEAFIGAL 952 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP------LPTYLVV 177 ++D I+ I + RL +K D K+ LQ++ P +P Y V+ Sbjct: 953 YVDRGIEHCRAFIRIVFCPRLKHFIESEKWNDAKSHLQQWCLAMRDPSSSEPDMPEYRVL 1012 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + G +++ F I G S+ KAE AE AL LE Sbjct: 1013 GIEGPTNNRIFKIAVYYKG-KRLASAAESNVHKAELRVAELALANLE 1058 Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%) Query: 36 HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLR 95 HNERLE+LGD+++ ++++ LY EG ++ R LV+ LA LA+ + E L+ Sbjct: 689 HNERLEYLGDAVVELIVSHHLYFMLTHHFEGGLATYRTALVQNRNLATLAKNCRIDEMLQ 748 Query: 96 LGPGELKSGGFRRESILADTVEALIGGVFLD 126 G + LA+ EA++ ++LD Sbjct: 749 YSHGADLINVAEFKHALANAFEAVMAAIYLD 779 >UniRef50_UPI0001C41B85 ribonuclease III Rnc n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B85 Length = 232 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 12/215 (5%) Query: 18 NHQELLQQALTHRSASSKHN----ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRA 73 N EL + A TH S +SKH+ ERLEFLGDS+L+ + + L + P EG ++++RA Sbjct: 12 NDMELYETAFTHSSYASKHHLNDYERLEFLGDSVLNMLTSEFLQNMHPDFGEGKLTKLRA 71 Query: 74 TLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVE 133 V N L + EF L +C++L + SI AD E+ +G ++LD I + Sbjct: 72 NYVCQNALIVYSHEFGLDKCVKLNLEDNALTDNEVISITADVFESFLGAIYLDQGISKCK 131 Query: 134 KL--ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 + I + ++I D K+ ++EY + TY +++ G HD+ F + Sbjct: 132 EFLTITVFPYIENEQIFF----HDYKSTIKEYGDAIDKEI-TYELIEEHGAPHDKTFVMK 186 Query: 192 CQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + G+ + G G S+++AEQ AA A+K L L+ Sbjct: 187 ILIDGV-DFGHGVGKSKKEAEQVAACNAIKTLRLD 220 >UniRef50_Q46IK9 RNAse III n=2 Tax=Prochlorococcus marinus RepID=Q46IK9_PROMT Length = 247 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 123/225 (54%), Gaps = 10/225 (4%) Query: 8 RLQRKLGYTFNHQEL-----LQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFP 61 +L +K F +++ + ++LTH SA+S+ N E LEFLGD++L + ++ + +++P Sbjct: 19 KLDQKFQKEFTKEKIKNILYINESLTHSSANSEINYENLEFLGDAVLRLIASDFIKNKYP 78 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + G+ S +R+ LV L E+ ++ E+ L +G L+ +I A+ EALIG Sbjct: 79 YMQVGERSELRSHLVSDLWLEEVGKKIEINSVLVIGNKALRDKS-ANATIQAEATEALIG 137 Query: 122 GVFLD-SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++ + ++ ++ ++ +++ + E+ +K+ K+ LQE Q + L +P Y +++ Sbjct: 138 ALYESLTIVEPIKDWLIPFWEEKSKEVLADPHKKNYKSALQELTQSKGLSIPIYKTIEI- 196 Query: 181 GEAHDQEFTIHCQVSGLSEPVV-GTGSSRRKAEQAAAEQALKKLE 224 + HD C V + + G+G S ++AE+ AA +ALK E Sbjct: 197 DKKHDNPKRFFCNVYVKNRSIAEGSGKSIKQAEKNAASKALKYFE 241 >UniRef50_A9NES4 DsRNA-specific ribonuclease III n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NES4_ACHLI Length = 219 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 119/222 (53%), Gaps = 13/222 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61 +N L ++L H +L QALTH S + + HNERLEFLGD+++ +++ L+ Sbjct: 1 MNDLLKQLNIETKHIDLYLQALTHTSYAHENQTDHNERLEFLGDAVIELMMSTYLFTH-D 59 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + ++G +++ RA VR L A++ +L +RLG GE + S++AD EA G Sbjct: 60 QSNQGVLTKRRAQAVREEALVLYAQKMDLESKMRLGNGE----QIAKPSMIADAFEAFFG 115 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +++D Q +K + + + ++ + KD KT+LQE++Q L +Y V+V G Sbjct: 116 ALYMD---QGFDKTYEIFNKVVIPHLNLVEHIKDYKTQLQEFIQLERKSL-SYKTVKVGG 171 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 +H F + G GSS ++AEQ AA++AL K+ Sbjct: 172 PSHRPIFKSEVFLENSIMLGTGQGSSTKEAEQNAAKEALSKV 213 >UniRef50_Q253V2 Ribonuclease 3 n=13 Tax=Chlamydiaceae RepID=RNC_CHLFF Length = 237 Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 13/227 (5%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRS------ASSKHNERLEFLGDSILSYVIANA 55 N I I ++ KL +TF +LL ALTH S ++ +ERLEFLGD++L ++ Sbjct: 3 NLINIKEVEAKLKFTFTQPQLLVTALTHPSYRNETVTITEDSERLEFLGDAVLCLIVTEH 62 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ FP +DEG +S RA L+ + + LGE L +G GE R S A+ Sbjct: 63 LFLLFPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLLIGKGERIQNERGRTSAYANL 122 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EA++G V+LD + ++ + ++ D I P +PK RLQ+ Q + LP Y Sbjct: 123 FEAILGAVYLDGGLAPARQITVPLLPSKKD-ILPL-MLGNPKNRLQQLTQKQLRTLPVYQ 180 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGS--SRRKAEQAAAEQAL 220 + I V ++ + G G S+++AE+ AA++AL Sbjct: 181 STPWISPQGAPGYHIRVIV---NDEIWGEGFALSKKEAEKLAAQEAL 224 >UniRef50_Q5FPZ7 Ribonuclease III n=1 Tax=Gluconobacter oxydans RepID=Q5FPZ7_GLUOX Length = 174 Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 4/172 (2%) Query: 52 IANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESI 111 +A L R+P EG + A LV LAE+A + L L++ P E +G R SI Sbjct: 1 MAEWLLERYPDEQEGALGPRHAHLVSRTVLAEIADQVGLSASLQISPHEEDAGIRRLSSI 60 Query: 112 LADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL 171 AD +EAL+G ++LD ++ +++ ++Q+R++ S K+PKT LQEY+ + LPL Sbjct: 61 RADAMEALLGALYLDGGLEPARRVVHQYWQSRIE--SADRPHKEPKTLLQEYMLSQGLPL 118 Query: 172 PTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 P Y ++ G +H F + V+ + G S+R AE AAA LK L Sbjct: 119 PHYELLSSDGPSHAPVFRV--SVTTMGHTGTGEAGSKRLAESAAATALLKHL 168 >UniRef50_C7MY58 RNAse III n=13 Tax=Actinomycetales RepID=C7MY58_SACVD Length = 250 Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 99/185 (53%), Gaps = 9/185 (4%) Query: 20 QELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 ELL ALTHRS + ++ NERLEFLGD++L V+ + LY + P + EG ++++RA+ Sbjct: 26 SELLTLALTHRSYAYENGGLPPNERLEFLGDAVLGLVVTDHLYRQHPDLPEGQLAKLRAS 85 Query: 75 LVRGNTLAELAREFELGECLRLGPG---ELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 +V + LA +AR G E +GG + SILAD +EA+IG V+L+ I+T Sbjct: 86 VVNMHALAGVARSLGEGGLGAHLLLGKGEELTGGRDKASILADGLEAVIGAVYLEHGIET 145 Query: 132 VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 L+ + L E D KT LQE L +P Y VV G H +EF+ Sbjct: 146 ARSLVHRLFGRLLAEAPRRGAGLDWKTSLQELTASAGLGVPEYKVVDT-GPDHRKEFSAV 204 Query: 192 CQVSG 196 V+G Sbjct: 205 VLVNG 209 >UniRef50_B6K1P5 Double-strand-specific pac1 ribonuclease n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K1P5_SCHJY Length = 325 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 14/230 (6%) Query: 3 PIVINRLQRKLGYTFNHQ----ELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYH 58 P+ I R ++ F H+ EL L R SKHNERLEFLGD +L ++ +Y Sbjct: 98 PLPIIRQKKLEEQVFTHKSRANELFPHCLDARKLLSKHNERLEFLGDDVLEGIVTKIIYE 157 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP +EG++S++RATLV + +++ A + L E L+LG KS + ++AD EA Sbjct: 158 RFPNANEGELSKLRATLVGNDMVSKFATLYGLHEKLQLGLCGEKSQLRKCTKVVADVFEA 217 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEY-LQ---GRHLPLPTY 174 +G ++LD+ I W + ++ K + P +L + LQ G+ Y Sbjct: 218 YLGALYLDNQIDAA----FEWVKQLIEPELVRFKMEPPINKLAKAELQRRIGKAGGKVEY 273 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 ++ + +E+ + C ++G SE G GS+ + A AA +AL E Sbjct: 274 RCIE-KKMGQREEYKVACIING-SEVSWGVGSNIKLAGTRAAMKALSSWE 321 >UniRef50_Q9S338 DsRNA-specific ribonuclease/ribonuclease III n=1 Tax=Prochlorococcus marinus RepID=Q9S338_PROMA Length = 249 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 9/208 (4%) Query: 21 ELLQQALTHRSAS-SKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGN 79 ++L +ALTH S + S ++ERLEF GD++L + + FP++ GD S +RA LV Sbjct: 44 KILNEALTHTSFNLSINHERLEFQGDAVLRLAASEYIQSHFPKLSVGDRSALRAQLVSDR 103 Query: 80 TLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF-LDSDIQTVEKLILN 138 LA++ + + + + LK ++I A+ EALIG ++ +I ++ + Sbjct: 104 WLAKVGYKIGIKTTMLIANKALKDEA-ATDTICAEGTEALIGALYECLRNIDAIQNWLEP 162 Query: 139 WYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE---FTIHCQVS 195 ++ +E+ +++ K+ LQE+ QG+ L P Y + ++ + D + T+H Q Sbjct: 163 YWNIESEEVLADPHKQNEKSALQEWSQGQGLNKPIYTIKEISKQHGDLKRFYCTVHIQND 222 Query: 196 GLSEPVVGTGSSRRKAEQAAAEQALKKL 223 E G GSSR+KA++ AA++ALKKL Sbjct: 223 FRGE---GWGSSRKKAQKEAAKEALKKL 247 >UniRef50_D1Y1Q3 Ribonuclease 3 (Ribonuclease III) (RNase III) (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1Q3_9BACT Length = 253 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 107/223 (47%), Gaps = 19/223 (8%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSAS-----SKHNERLEFLGDSILSYVIANALYHRFP 61 + LQ++ GY F ELL+ A T RS + S +NERLEFLGD+ LS ++ ALY +P Sbjct: 15 DSLQKRTGYQFRDPELLRLAFTQRSGAGGPNPSMNNERLEFLGDAALSLLVGEALYREYP 74 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 DEG M+ R+ LV G L+ E + LR+ G S ++++ D+VEA G Sbjct: 75 EADEGFMTIERSKLVCGRNLSAWGYEAGFDQMLRVCDGVEVS-----DAMVEDSVEAAAG 129 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 FLD + V L+ Q+ D G D + L+ L P Y ++ R Sbjct: 130 AFFLDGGLDAVRALL----QSFSDYPDQG-AGFDSRRHLERDCSYEKLGAPRYDTMRRRA 184 Query: 182 EAHDQEFTIHCQVSGLSEPV-VGTGSSRRKAEQAAAEQALKKL 223 + VS EP G G+ R +AE+ AA A+ +L Sbjct: 185 NG---KIIFESSVSLDKEPSGTGIGADRTEAERNAARDAMCRL 224 >UniRef50_Q8A2E8 Ribonuclease 3 n=14 Tax=Bacteroidales RepID=RNC_BACTN Length = 311 Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 121/225 (53%), Gaps = 21/225 (9%) Query: 11 RKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRV 63 R LG+ ++ ++ +QAL H+S++ + +NERLEFLGD+IL ++ + +Y RF Sbjct: 25 RILGFYPHNIQIYEQALLHKSSAVRSEKGRPLNNERLEFLGDAILDAIVGDIVYKRFEGK 84 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG ++ R+ +V+ TL +LA E L + ++ + + + EA IG + Sbjct: 85 REGFLTNTRSKIVQRETLNKLAVEIGLDKLIKYSTRSSSHNSY----MYGNAFEAFIGAI 140 Query: 124 FLDSDI----QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +LD Q +E+ I+N Y LD+IS K+ + K++L E+ Q + + L+ Q Sbjct: 141 YLDQGYERCKQFMEQRIINRY-IDLDKISR--KEVNFKSKLIEWSQKNKMEVSFELIEQF 197 Query: 180 RGEAHDQEFTIHCQVSGLSEPV-VGTGSSRRKAEQAAAEQALKKL 223 + F ++ GL P GTG S+++++Q AA+ A+KK+ Sbjct: 198 LDHDSNPVFQTEVRIEGL--PAGTGTGYSKKESQQNAAQMAIKKV 240 >UniRef50_C7M0C4 Ribonuclease III n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0C4_ACIFD Length = 263 Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 10/202 (4%) Query: 22 LLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 +++QAL H+SAS NERLEFLGD+++ V+++ LY R+P VDEG ++++R+ LV Sbjct: 24 VVRQALVHKSASRDPLDSNERLEFLGDAVIELVVSDYLYRRYPDVDEGRLTQVRSALVSR 83 Query: 79 NTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILN 138 +L + + L E + +G + + A+ VEAL G V+L Q +L Sbjct: 84 RSLGSVGVQGGLLEAITVGQADALG-----PVLAANAVEALAGAVYLAGGFQLSVAFVLA 138 Query: 139 WYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLS 198 L+ + D K+ L + L H P Y V G HD+ + + Q+ G Sbjct: 139 ILGPSLERVDGDLVLGDYKSLLHQALAKLHHQPPRY-KVSWSGPDHDRRYRVVVQLPGGF 197 Query: 199 EPVVGTGSSRRKAEQAAAEQAL 220 E G G+SR++AEQ A A+ Sbjct: 198 E-AAGEGASRKEAEQEACRLAI 218 >UniRef50_Q9PQT8 Ribonuclease 3 n=15 Tax=Ureaplasma RepID=RNC_UREPA Length = 236 Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 22/214 (10%) Query: 25 QALTHRSASSKHN-----ERLEFLGDSILSYVIANALYH-------RFPRVDEGDMSRMR 72 +ALTH+S +++H +RLEFLGD+ + +VI+N +++ + +DEG+M+R R Sbjct: 25 EALTHKSYANEHKLTKNYQRLEFLGDACVEWVISNFIFNYKIKDNEKMRSLDEGEMTRAR 84 Query: 73 ATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 + +VR L+ A++ L + L +G G + R E I D EA IG V D I+ V Sbjct: 85 SNMVRSEILSYAAKDLGLTDFLMIGVGLEQDQSARMEKIYEDIFEAFIGAVAQDQGIKKV 144 Query: 133 EKLILNWYQTRLDEISPG--DKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 LIL +T + G + QKD KT QE Q + Y +V+ G+ + Sbjct: 145 S-LILE--KTLIKYFREGQINYQKDYKTIFQEQAQRINKKPIMYKLVRNEGDKKEVHLVW 201 Query: 191 HCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + + G +G S+R++AE AA+ A+ KL+ Sbjct: 202 NDLIYG-----IGIASTRKEAEILAAKNAILKLD 230 >UniRef50_C6VXT7 Ribonuclease III n=3 Tax=Flexibacteraceae RepID=C6VXT7_DYAFD Length = 248 Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 14/214 (6%) Query: 22 LLQQALTHRSASSK--------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRA 73 + Q A H SAS + NERLE+LGD++L V+A L+ ++P DEG ++ +R+ Sbjct: 40 VYQLAFRHTSASRETAIKGFRESNERLEYLGDAVLGMVVAEFLFTKYPYKDEGFLTEIRS 99 Query: 74 TLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVE 133 +V +L +++R+ L + + G R S+ D +EA +G ++LD + Sbjct: 100 RIVNRESLNQISRKLGLDRLIEYDGN--RRGMSPRSSMYGDALEAFVGAIYLDKGFRFTR 157 Query: 134 KLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQ 193 I++ T D S + K+ + E+ Q R + +++ RG H +EF Sbjct: 158 TFIISKLITHYDLDSIIQNNVNFKSLIIEWAQ-REGKEIRFEILEERGTRHHREFISQIL 216 Query: 194 VSGLSEP-VVGTGSSRRKAEQAAAEQALKKLELE 226 V+ EP +G G +++KAEQ+A+EQA LEL+ Sbjct: 217 VN--DEPFAIGNGFTKKKAEQSASEQACAILELK 248 >UniRef50_Q7MU11 Ribonuclease III n=2 Tax=Porphyromonas gingivalis RepID=Q7MU11_PORGI Length = 237 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 101/191 (52%), Gaps = 9/191 (4%) Query: 36 HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLR 95 +NERLEFLGDS+L+ I+ LY + P DEGDMS+ R+ +V+ +A++ L L Sbjct: 36 NNERLEFLGDSVLATAISGYLYRQHPHWDEGDMSQRRSAIVKRQINNVVAKKLRLDRFL- 94 Query: 96 LGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEI--SPGDKQ 153 + GE+ I+ +T+EALIG ++LD Q EK +L + E+ S D Sbjct: 95 IVRGEISQMS---SDIMGNTLEALIGAIYLDKGYQAAEKFVLTRFIPVFHELEDSLTDTT 151 Query: 154 KDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 + K+ L E+ Q HL L L+ + + AH F V G G G ++++A Q Sbjct: 152 TNYKSLLLEWAQKHHLNLEFRLISEPK-RAHGH-FNYAVFVDG-HRIGSGIGMNKKEAHQ 208 Query: 214 AAAEQALKKLE 224 AA AL+KL+ Sbjct: 209 NAAHDALEKLK 219 >UniRef50_B4WMQ9 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMQ9_9SYNE Length = 263 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 11/210 (5%) Query: 21 ELLQQALTHRSAS-SKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGN 79 ELL+ AL S+S +++NE+LEFLGD+ L A L R+P++ GDMS +R+ +V Sbjct: 51 ELLELALVDISSSATQNNEKLEFLGDAALRLAAAEFLMERYPQMALGDMSAVRSQIVSDR 110 Query: 80 TLAELAREFELGECLRLGPGEL--KSGGFRRESILADTVEALIGGVFLDSDIQTVEKLIL 137 TLA LA+ + L L L K+G +S LADT EA++G ++L + ++ + L Sbjct: 111 TLATLAKRYHLRRYLILSKSAAGDKAGT---DSRLADTFEAILGALYLSAGNLSLIRPWL 167 Query: 138 NWYQTRLDEISPGD-KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSG 196 + + RL + D +++ K LQE Q + LPTY V ++ + H E + + Sbjct: 168 DPHFARLTQSLRSDPARQNYKAALQELTQSHYKSLPTYKVSEI-SQIHGDEERFQAE-AW 225 Query: 197 LSEPVVGTGSSR--RKAEQAAAEQALKKLE 224 + + GTG R + AEQAAA A LE Sbjct: 226 FQDKLWGTGKGRSMKMAEQAAARIAFNALE 255 >UniRef50_A4CTC0 Putative ribonuclease III n=1 Tax=Synechococcus sp. WH 7805 RepID=A4CTC0_SYNPV Length = 269 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 16/219 (7%) Query: 18 NHQELLQ--------QALTHRSAS-SKHNERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 NH E LQ +ALTH S+ H+E+LEFLGD++L + + +P++ G+ Sbjct: 48 NHPERLQREELDCLNEALTHTSSGLHPHHEQLEFLGDAVLRLAASEFIAVAYPQMPVGER 107 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGG--FRRESILADTVEALIGGVFLD 126 S +RA LV L +L + E R+GP K+ G +I A+ EALIG ++ Sbjct: 108 SSLRAQLVSDRWLTQLGEAITIEEWWRIGP---KASGDPTAAATIRAELSEALIGAMYRI 164 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + +Q V+ + +Q + + + + K+ LQE+ QGR L LP Y +V + H Sbjct: 165 AGLQAVQTWLTPHWQRSAEAVLADPHRGNSKSALQEWSQGRGLGLPRYACSEV-SQRHGD 223 Query: 187 EFTIHCQVSGLSEPVV-GTGSSRRKAEQAAAEQALKKLE 224 V+ + G G SRR+AEQ AAE + +L+ Sbjct: 224 PKRFQASVTLPPDLAADGWGGSRREAEQQAAEALMAQLK 262 >UniRef50_Q3B0H4 RNAse III n=2 Tax=Synechococcus RepID=Q3B0H4_SYNS9 Length = 249 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 8/208 (3%) Query: 22 LLQQALTHRSAS-SKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNT 80 L+ +AL H SA SK+ ERLEFLGD++L + ++P + G S +RA LV Sbjct: 29 LVDEALIHVSAGRSKNFERLEFLGDAVLRLAATEFIDQQYPNLPVGRCSSLRAQLVSDRW 88 Query: 81 LAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS--DIQTVEK-LIL 137 LA+L + +L L LGP L + ++ AD EALIG ++ S +++ + L Sbjct: 89 LAQLGEQLQLESFLVLGPKALGDAA-AQATLQADATEALIGAIYSGSGNNLEPIHHWLTP 147 Query: 138 NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE-FTIHCQVSG 196 +W QT D ++ + KT LQE+ Q L LP Y + D E F +V G Sbjct: 148 HWQQTTADVLAR-PHLFNGKTMLQEWSQAEGLGLPNYTTTEQSSRHGDPERFKSRVEV-G 205 Query: 197 LSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G G SR++AEQ AA +A+++L+ Sbjct: 206 SRLSANGFGRSRKEAEQNAATEAVQRLQ 233 >UniRef50_C4XDU4 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XDU4_MYCFE Length = 236 Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 37/235 (15%) Query: 14 GYTFNHQEL--LQQALTH------RSASSKHN--------ERLEFLGDSILSYVIANALY 57 + N+ L +QA+TH + +K+N + LEFLGD+IL Y+ ++ ++ Sbjct: 14 AWNINYHNLGYYRQAVTHGSYFGLKKNQNKNNVSERVGNYQDLEFLGDAILQYLSSDFVF 73 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +FP + G+M+ +R+ LV +L E++ + L + L PG++ R + AD E Sbjct: 74 KKFPNLSAGNMTLIRSKLVCTKSLNEISTKIGLKDFLLTAPGQMSKDAKRSVKVGADIFE 133 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQ----KDPKTRLQEYLQGRHLPLPT 173 A I ++LD++++ V++ LN +T D I GD KD KT QE +Q Sbjct: 134 AFIAAIYLDTNLKVVKEF-LN--KTVFD-IKIGDFDIKHLKDAKTAFQEQIQ----SFSK 185 Query: 174 YLVVQVRGEAHDQEFTIHC----QVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 V+ + E EF H ++ G +G G S+ +AE+ AA AL K++ Sbjct: 186 LAVMYIVSEKSPTEFEAHAVHDNKIYG-----IGFGKSKAEAEENAALDALHKMK 235 >UniRef50_A6KZ76 Ribonuclease 3 n=30 Tax=Bacteroidales RepID=RNC_BACV8 Length = 308 Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 19/228 (8%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRF 60 R + LG+ + +QAL H+S S K +NERLEFLGD+IL V+A+ +Y RF Sbjct: 22 RFYKMLGFYPKDISIYEQALLHKSLSVKSEKGRLLNNERLEFLGDAILDAVVADIVYKRF 81 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 EG ++ R+ +V+ TL LA E L + ++ + + + + EAL+ Sbjct: 82 EGKREGFLTNTRSKIVQRETLNRLAIEIGLDKLIKYTARQSSHNSY----MCGNAFEALV 137 Query: 121 GGVFLDSDIQT----VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 G ++LD + +E I+ Y L++IS K+ + K++L E+ Q + L+ Sbjct: 138 GAIYLDRGYRACKYFMEHRIIGPY-INLEKISR--KEVNFKSKLIEWSQKNRFEVTFELI 194 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 Q + ++ F V G+S GTG S+++++Q AA AL K++ Sbjct: 195 TQSHDQGYNPTFESEVLVEGISGG-KGTGYSKKESQQMAARVALGKIK 241 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q47WP5 Ribonuclease 3 n=310 Tax=Proteobacteria RepID=RN... 283 3e-75 UniRef50_B0USS1 Ribonuclease 3 n=5 Tax=Gammaproteobacteria RepID... 279 6e-74 UniRef50_UPI0000E0E146 ribonuclease III n=1 Tax=Glaciecola sp. H... 278 9e-74 UniRef50_Q7VRR0 Ribonuclease 3 n=8 Tax=Gammaproteobacteria RepID... 273 3e-72 UniRef50_A4J683 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_D... 271 1e-71 UniRef50_Q2Y871 Ribonuclease III n=2 Tax=Proteobacteria RepID=Q2... 270 2e-71 UniRef50_B2I604 Ribonuclease 3 n=12 Tax=Bacteria RepID=RNC_XYLF2 269 6e-71 UniRef50_Q1YS28 Ribonuclease III n=1 Tax=gamma proteobacterium H... 266 4e-70 UniRef50_Q3KHL9 Ribonuclease 3 n=16 Tax=Gammaproteobacteria RepI... 265 1e-69 UniRef50_D0L0J9 Ribonuclease III n=2 Tax=Gammaproteobacteria Rep... 263 4e-69 UniRef50_C8W586 Ribonuclease III n=2 Tax=Clostridia RepID=C8W586... 261 1e-68 UniRef50_UPI0000E87AF2 ribonuclease III n=1 Tax=Methylophilales ... 260 2e-68 UniRef50_A3EU88 Ribonuclease III n=2 Tax=Leptospirillum sp. Grou... 259 6e-68 UniRef50_Q8R9W3 Ribonuclease 3 n=37 Tax=Bacteria RepID=RNC_THETN 258 1e-67 UniRef50_C1D7L4 Rnc n=2 Tax=Proteobacteria RepID=C1D7L4_LARHH 258 1e-67 UniRef50_Q0AF70 Ribonuclease 3 n=4 Tax=Proteobacteria RepID=RNC_... 257 2e-67 UniRef50_A9KFA0 Ribonuclease 3 n=6 Tax=Coxiella burnetii RepID=R... 257 2e-67 UniRef50_Q3AC58 Ribonuclease 3 n=1 Tax=Carboxydothermus hydrogen... 255 7e-67 UniRef50_C6HXB9 Ribonuclease III n=1 Tax=Leptospirillum ferrodia... 255 1e-66 UniRef50_A5D1H6 Ribonuclease 3 n=3 Tax=Peptococcaceae RepID=RNC_... 253 2e-66 UniRef50_A0L633 Ribonuclease 3 n=1 Tax=Magnetococcus sp. MC-1 Re... 253 4e-66 UniRef50_Q47S78 Ribonuclease 3 n=73 Tax=Actinobacteria (class) R... 253 5e-66 UniRef50_B1LTR3 Ribonuclease III n=11 Tax=Alphaproteobacteria Re... 252 7e-66 UniRef50_A5EV51 Ribonuclease III n=2 Tax=Cardiobacteriaceae RepI... 251 1e-65 UniRef50_Q67PF5 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_S... 250 2e-65 UniRef50_C9RJ88 Ribonuclease III n=1 Tax=Fibrobacter succinogene... 250 3e-65 UniRef50_Q3A4Q8 Ribonuclease 3 n=1 Tax=Pelobacter carbinolicus D... 250 3e-65 UniRef50_D1AY72 Ribonuclease III n=1 Tax=Streptobacillus monilif... 250 3e-65 UniRef50_Q3SH50 Ribonuclease 3 n=11 Tax=Proteobacteria RepID=RNC... 249 5e-65 UniRef50_B8CWW9 Ribonuclease III n=1 Tax=Halothermothrix orenii ... 249 6e-65 UniRef50_Q2LVR4 Ribonuclease III n=1 Tax=Syntrophus aciditrophic... 249 6e-65 UniRef50_C0GHL1 Ribonuclease III n=1 Tax=Dethiobacter alkaliphil... 248 1e-64 UniRef50_Q5LZ68 Ribonuclease 3 n=100 Tax=cellular organisms RepI... 246 3e-64 UniRef50_D0STQ6 Ribonuclease III n=1 Tax=Acinetobacter lwoffii S... 246 5e-64 UniRef50_A1AWQ6 Ribonuclease III n=3 Tax=Gammaproteobacteria Rep... 245 7e-64 UniRef50_B8FKR2 Ribonuclease III n=1 Tax=Desulfatibacillum alken... 245 8e-64 UniRef50_B3R1Z9 Ribonuclease 3 n=139 Tax=Bacteria RepID=RNC_CUPTR 245 9e-64 UniRef50_Q0SMF0 Ribonuclease 3 n=21 Tax=Borrelia RepID=RNC_BORAP 245 1e-63 UniRef50_Q1Q4S0 Similar to ribonuclease III n=1 Tax=Candidatus K... 245 1e-63 UniRef50_B0PD50 Putative uncharacterized protein n=1 Tax=Anaerot... 245 1e-63 UniRef50_B2KC89 Ribonuclease III n=1 Tax=Elusimicrobium minutum ... 243 3e-63 UniRef50_B2A2N1 Ribonuclease 3 n=1 Tax=Natranaerobius thermophil... 243 3e-63 UniRef50_B0VFA5 DsRNA-specific ribonuclease n=1 Tax=Candidatus C... 242 5e-63 UniRef50_C9KQ86 Ribonuclease III n=4 Tax=Clostridiales RepID=C9K... 242 7e-63 UniRef50_A0NMB9 Ribonuclease III n=2 Tax=Rhodobacteraceae RepID=... 242 8e-63 UniRef50_Q6MLR5 Ribonuclease 3 n=1 Tax=Bdellovibrio bacteriovoru... 242 8e-63 UniRef50_B0S1M6 Ribonuclease III n=2 Tax=Finegoldia magna RepID=... 241 1e-62 UniRef50_Q72C44 Ribonuclease 3 n=9 Tax=Desulfovibrionaceae RepID... 241 1e-62 UniRef50_D2QZC7 Ribonuclease III n=1 Tax=Pirellula staleyi DSM 6... 241 1e-62 UniRef50_D1ATS9 Ribonuclease 3 n=1 Tax=Anaplasma centrale str. I... 241 2e-62 UniRef50_A6GP51 Ribonuclease III n=1 Tax=Limnobacter sp. MED105 ... 240 2e-62 UniRef50_C6V631 Ribonuclease III n=2 Tax=Neorickettsia RepID=C6V... 240 3e-62 UniRef50_C7NB47 Ribonuclease III n=1 Tax=Leptotrichia buccalis C... 240 3e-62 UniRef50_C8PI53 Ribonuclease III n=1 Tax=Campylobacter gracilis ... 240 3e-62 UniRef50_Q39T82 Ribonuclease 3 n=5 Tax=Geobacter RepID=RNC_GEOMG 240 3e-62 UniRef50_D1ALH0 Ribonuclease III n=7 Tax=Fusobacteriaceae RepID=... 240 3e-62 UniRef50_C0QLB1 Two domain fusion protein n=1 Tax=Desulfobacteri... 240 3e-62 UniRef50_B3T0T1 Putative RNase3 domain protein n=2 Tax=prokaryot... 239 5e-62 UniRef50_B4RCU4 Ribonuclease 3 n=6 Tax=Caulobacteraceae RepID=RN... 239 5e-62 UniRef50_C9L8J0 Ribonuclease III n=4 Tax=Clostridiales RepID=C9L... 239 6e-62 UniRef50_A8SMU0 Putative uncharacterized protein n=1 Tax=Parvimo... 239 7e-62 UniRef50_B9E1G8 Ribonuclease 3 n=35 Tax=Clostridium RepID=RNC_CLOK1 238 8e-62 UniRef50_D0GJ73 Ribonuclease III n=2 Tax=Leptotrichia RepID=D0GJ... 238 1e-61 UniRef50_A4VIX5 Ribonuclease III n=2 Tax=Proteobacteria RepID=A4... 238 1e-61 UniRef50_B3DV16 Ribonuclease III n=2 Tax=Verrucomicrobia RepID=B... 238 1e-61 UniRef50_UPI00016BFC87 Ribonuclease III n=1 Tax=Epulopiscium sp.... 238 2e-61 UniRef50_A6DSV3 Ribonuclease III n=1 Tax=Lentisphaera araneosa H... 237 2e-61 UniRef50_Q4FUV6 Ribonuclease 3 n=11 Tax=Gammaproteobacteria RepI... 237 2e-61 UniRef50_A8ZZF3 Ribonuclease III n=1 Tax=Desulfococcus oleovoran... 237 2e-61 UniRef50_Q6ANV0 Ribonuclease 3 n=2 Tax=Desulfobulbaceae RepID=RN... 237 2e-61 UniRef50_B1C8X8 Putative uncharacterized protein n=1 Tax=Anaerof... 236 4e-61 UniRef50_A0LGM1 Ribonuclease 3 n=1 Tax=Syntrophobacter fumaroxid... 236 4e-61 UniRef50_B9M911 Ribonuclease III n=1 Tax=Geobacter sp. FRC-32 Re... 236 5e-61 UniRef50_A8TKF3 SsrA-binding protein n=1 Tax=alpha proteobacteri... 236 5e-61 UniRef50_B0TGW4 Ribonuclease 3 n=1 Tax=Heliobacterium modestical... 235 7e-61 UniRef50_C9LMI7 Ribonuclease III n=1 Tax=Dialister invisus DSM 1... 235 7e-61 UniRef50_Q0AYW0 Ribonuclease 3 n=1 Tax=Syntrophomonas wolfei sub... 235 8e-61 UniRef50_Q053L4 Ribonuclease 3 n=4 Tax=Leptospira RepID=RNC_LEPBL 235 8e-61 UniRef50_D2RKZ6 Ribonuclease III n=2 Tax=Acidaminococcus RepID=D... 235 8e-61 UniRef50_D1B4H0 Ribonuclease III n=5 Tax=Campylobacterales RepID... 235 8e-61 UniRef50_C2EW95 Ribonuclease III n=4 Tax=Lactobacillaceae RepID=... 235 8e-61 UniRef50_Q9ZLH2 Ribonuclease 3 n=45 Tax=Epsilonproteobacteria Re... 235 9e-61 UniRef50_C5SLX4 Ribonuclease III n=1 Tax=Asticcacaulis excentric... 235 1e-60 UniRef50_A8SP75 Putative uncharacterized protein n=2 Tax=Clostri... 235 1e-60 UniRef50_D0MGH0 Ribonuclease III n=1 Tax=Rhodothermus marinus DS... 234 1e-60 UniRef50_Q2GIW0 Ribonuclease 3 n=17 Tax=Anaplasmataceae RepID=RN... 234 2e-60 UniRef50_D1VB32 Ribonuclease III n=1 Tax=Frankia sp. EuI1c RepID... 234 2e-60 UniRef50_C5CSF5 Ribonuclease 3 n=6 Tax=Burkholderiales RepID=RNC... 234 2e-60 UniRef50_C8NEF3 Ribonuclease III n=2 Tax=Granulicatella RepID=C8... 233 4e-60 UniRef50_C4V2U1 Ribonuclease III n=1 Tax=Selenomonas flueggei AT... 233 4e-60 UniRef50_Q2W513 DsRNA-specific ribonuclease n=2 Tax=Magnetospiri... 233 5e-60 UniRef50_A5VKP2 Ribonuclease 3 n=25 Tax=Lactobacillus RepID=RNC_... 233 5e-60 UniRef50_A7NAR0 Ribonuclease 3 n=18 Tax=Francisella RepID=RNC_FRATF 232 6e-60 UniRef50_C3Y2N8 Putative uncharacterized protein n=1 Tax=Branchi... 232 6e-60 UniRef50_Q5GTI3 Ribonuclease 3 n=17 Tax=Rickettsiales RepID=RNC_... 232 6e-60 UniRef50_B0K1V8 Ribonuclease III n=19 Tax=Clostridia RepID=B0K1V... 232 9e-60 UniRef50_C8W741 Ribonuclease III n=3 Tax=Atopobium RepID=C8W741_... 231 1e-59 UniRef50_C3RKG6 Ribonuclease III n=5 Tax=Bacteria RepID=C3RKG6_9... 231 1e-59 UniRef50_B6WR93 Putative uncharacterized protein n=1 Tax=Desulfo... 231 1e-59 UniRef50_C1Q9X5 Ribonuclease III n=1 Tax=Brachyspira murdochii D... 231 1e-59 UniRef50_C8X2M7 Ribonuclease III n=4 Tax=Desulfovibrionales RepI... 231 1e-59 UniRef50_B2S448 Ribonuclease 3 n=2 Tax=Treponema pallidum RepID=... 231 2e-59 UniRef50_C6XJG5 Ribonuclease III n=1 Tax=Hirschia baltica ATCC 4... 231 2e-59 UniRef50_B6IN01 Ribonuclease III n=1 Tax=Rhodospirillum centenum... 231 2e-59 UniRef50_Q3ZXY9 Ribonuclease 3 n=5 Tax=Dehalococcoides RepID=RNC... 231 2e-59 UniRef50_D1BLX9 Ribonuclease III n=3 Tax=Veillonella RepID=D1BLX... 230 3e-59 UniRef50_Q0F3I4 Ribonuclease III n=1 Tax=Mariprofundus ferrooxyd... 230 3e-59 UniRef50_UPI000174552F putative Ribonuclease III n=1 Tax=Verruco... 230 4e-59 UniRef50_B7JZ63 Ribonuclease III n=3 Tax=Cyanobacteria RepID=B7J... 230 4e-59 UniRef50_B8E199 Ribonuclease III n=1 Tax=Dictyoglomus turgidum D... 229 4e-59 UniRef50_D0LWB5 Ribonuclease III n=1 Tax=Haliangium ochraceum DS... 229 5e-59 UniRef50_Q0APC4 Ribonuclease III n=2 Tax=Hyphomonadaceae RepID=Q... 229 5e-59 UniRef50_A5CEW8 Ribonuclease III n=2 Tax=Orientia tsutsugamushi ... 229 5e-59 UniRef50_B9XI61 Ribonuclease III n=1 Tax=bacterium Ellin514 RepI... 229 6e-59 UniRef50_Q8CPI1 Ribonuclease 3 n=63 Tax=Staphylococcaceae RepID=... 229 7e-59 UniRef50_C5QRI2 Ribonuclease III n=2 Tax=Staphylococcus RepID=C5... 228 9e-59 UniRef50_C2KW20 Ribonuclease III n=1 Tax=Oribacterium sinus F026... 228 1e-58 UniRef50_O69161 Ribonuclease 3 n=2 Tax=Alphaproteobacteria RepID... 228 1e-58 UniRef50_A5IN74 Ribonuclease 3 n=8 Tax=Thermotogaceae RepID=RNC_... 228 1e-58 UniRef50_C4FT63 Putative uncharacterized protein n=1 Tax=Catonel... 228 1e-58 UniRef50_C0QYN3 Ribonuclease III n=1 Tax=Brachyspira hyodysenter... 227 2e-58 UniRef50_C8PUU2 Ribonuclease III n=4 Tax=Gammaproteobacteria Rep... 227 2e-58 UniRef50_D1CFY1 Ribonuclease III n=1 Tax=Thermobaculum terrenum ... 227 2e-58 UniRef50_C1ZAX4 RNAse III n=2 Tax=Planctomycetaceae RepID=C1ZAX4... 227 2e-58 UniRef50_Q7UGZ7 Ribonuclease 3 n=1 Tax=Rhodopirellula baltica Re... 226 3e-58 UniRef50_A6C1C3 Ribonuclease III n=1 Tax=Planctomyces maris DSM ... 226 3e-58 UniRef50_A8GM79 Ribonuclease 3 n=6 Tax=Rickettsia RepID=RNC_RICAH 226 3e-58 UniRef50_Q027L3 Ribonuclease 3 n=1 Tax=Candidatus Solibacter usi... 226 4e-58 UniRef50_C7LRK0 Ribonuclease III n=1 Tax=Desulfomicrobium bacula... 226 4e-58 UniRef50_B1H0Q0 Ribonuclease III n=1 Tax=uncultured Termite grou... 226 5e-58 UniRef50_Q8RGX3 Ribonuclease 3 n=10 Tax=Fusobacterium RepID=RNC_... 225 7e-58 UniRef50_B4U7T8 Ribonuclease 3 n=3 Tax=Aquificaceae RepID=RNC_HYDS0 225 8e-58 UniRef50_D1N9T0 Ribonuclease III n=1 Tax=Victivallis vadensis AT... 225 8e-58 UniRef50_Q6MEK1 Ribonuclease 3 n=2 Tax=Parachlamydiaceae RepID=R... 225 9e-58 UniRef50_B1ZYU8 Ribonuclease III n=2 Tax=Opitutaceae RepID=B1ZYU... 225 1e-57 UniRef50_A1APX0 Ribonuclease III n=1 Tax=Pelobacter propionicus ... 225 1e-57 UniRef50_Q1D5X9 Ribonuclease 3 n=1 Tax=Myxococcus xanthus DK 162... 225 1e-57 UniRef50_Q2S2W4 Ribonuclease III n=1 Tax=Salinibacter ruber DSM ... 224 2e-57 UniRef50_C3P5Q0 Ribonuclease 3 n=173 Tax=cellular organisms RepI... 224 2e-57 UniRef50_C1SM31 Ribonuclease III n=1 Tax=Denitrovibrio acetiphil... 223 3e-57 UniRef50_Q1JXG8 Ribonuclease III n=1 Tax=Desulfuromonas acetoxid... 223 3e-57 UniRef50_Q0BTG2 Ribonuclease III n=12 Tax=Rhodospirillales RepID... 223 5e-57 UniRef50_Q73NX5 Ribonuclease 3 n=2 Tax=Treponema RepID=RNC_TREDE 222 6e-57 UniRef50_B5YDQ5 Ribonuclease III n=1 Tax=Dictyoglomus thermophil... 221 1e-56 UniRef50_A4XJW5 Ribonuclease III n=2 Tax=Clostridia RepID=A4XJW5... 221 1e-56 UniRef50_C7GYL4 Ribonuclease III n=1 Tax=Eubacterium saphenum AT... 221 1e-56 UniRef50_Q1NXA7 Ribonuclease III n=2 Tax=delta proteobacterium M... 221 1e-56 UniRef50_B3E2K4 Ribonuclease III n=1 Tax=Geobacter lovleyi SZ Re... 221 2e-56 UniRef50_A0YTE9 Ribonuclease III n=1 Tax=Lyngbya sp. PCC 8106 Re... 220 2e-56 UniRef50_Q0C3T9 Ribonuclease III n=1 Tax=Hyphomonas neptunium AT... 220 2e-56 UniRef50_C3PH92 Ribonuclease III n=12 Tax=Corynebacterium RepID=... 220 3e-56 UniRef50_B2SAD9 Ribonuclease 3 n=62 Tax=Rhizobiales RepID=RNC_BRUA1 219 5e-56 UniRef50_Q9Z5U2 Ribonuclease 3 n=9 Tax=Sphingomonadales RepID=RN... 218 9e-56 UniRef50_C1TMA2 Ribonuclease III n=1 Tax=Dethiosulfovibrio pepti... 218 1e-55 UniRef50_B4WL11 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7... 218 1e-55 UniRef50_Q049R1 DsRNA-specific ribonuclease n=4 Tax=Lactobacillu... 217 2e-55 UniRef50_UPI00016C442D ribonuclease III n=1 Tax=Gemmata obscurig... 217 2e-55 UniRef50_Q2IIE0 Ribonuclease III n=5 Tax=Cystobacterineae RepID=... 217 3e-55 UniRef50_A9WJ69 Ribonuclease 3 n=3 Tax=Chloroflexus RepID=RNC_CHLAA 216 3e-55 UniRef50_B4RJT7 Ribonuclease 3 n=30 Tax=Neisseriaceae RepID=RNC_... 216 4e-55 UniRef50_P74368 Ribonuclease 3 n=1 Tax=Synechocystis sp. PCC 680... 216 4e-55 UniRef50_B9ZJG8 Ribonuclease III n=1 Tax=Thioalkalivibrio sp. K9... 216 4e-55 UniRef50_A7BCY7 Putative uncharacterized protein n=1 Tax=Actinom... 216 4e-55 UniRef50_D0YUT0 Ribonuclease III n=3 Tax=Mobiluncus RepID=D0YUT0... 216 6e-55 UniRef50_UPI0001553722 PREDICTED: similar to ribonuclease III, n... 215 7e-55 UniRef50_A5V230 Ribonuclease 3 n=2 Tax=Roseiflexus RepID=RNC_ROSS1 215 7e-55 UniRef50_D0RNU3 Ribonuclease III n=1 Tax=alpha proteobacterium H... 215 9e-55 UniRef50_B0SDK6 Ribonuclease III n=2 Tax=Leptospira biflexa sero... 215 1e-54 UniRef50_Q9NRR4 Ribonuclease 3 n=53 Tax=Eumetazoa RepID=RNC_HUMAN 215 1e-54 UniRef50_C0VZE3 Ribonuclease III n=1 Tax=Actinomyces coleocanis ... 214 2e-54 UniRef50_A9B5J8 Ribonuclease III n=1 Tax=Herpetosiphon aurantiac... 214 2e-54 UniRef50_A4E6T0 Putative uncharacterized protein n=3 Tax=Collins... 213 3e-54 UniRef50_Q4JUY7 Ribonuclease 3 n=9 Tax=Corynebacterium RepID=RNC... 213 3e-54 UniRef50_C8WGU4 Ribonuclease III n=2 Tax=Coriobacteriaceae RepID... 213 5e-54 UniRef50_D2LJ11 Ribonuclease III n=1 Tax=Rhodomicrobium vannieli... 213 5e-54 UniRef50_Q3B6L3 Ribonuclease 3 n=9 Tax=Chlorobiaceae RepID=RNC_P... 212 7e-54 UniRef50_A5UJK3 Ribonuclease III (DsRNA-specific), Rnc n=2 Tax=M... 211 2e-53 UniRef50_Q6PF88 Rnasen protein (Fragment) n=15 Tax=Coelomata Rep... 211 2e-53 UniRef50_A1WMW1 Ribonuclease 3 n=1 Tax=Verminephrobacter eisenia... 210 3e-53 UniRef50_A9WMX9 Ribonuclease III n=3 Tax=Micrococcaceae RepID=A9... 210 3e-53 UniRef50_A6LNE7 Ribonuclease III n=2 Tax=Thermosipho RepID=A6LNE... 210 3e-53 UniRef50_C7N559 Ribonuclease III n=1 Tax=Slackia heliotrinireduc... 210 3e-53 UniRef50_Q2SRZ8 Ribonuclease 3 n=4 Tax=Mollicutes RepID=RNC_MYCCT 209 5e-53 UniRef50_Q3SRB3 Ribonuclease 3 n=17 Tax=Rhizobiales RepID=RNC_NITWN 209 7e-53 UniRef50_B5JG37 Ribonuclease III n=1 Tax=Verrucomicrobiae bacter... 208 8e-53 UniRef50_D1C6L4 Ribonuclease III n=1 Tax=Sphaerobacter thermophi... 208 8e-53 UniRef50_A9A9D4 Ribonuclease III n=4 Tax=Methanococcus maripalud... 208 1e-52 UniRef50_D0LAL1 Ribonuclease III n=11 Tax=Actinomycetales RepID=... 208 2e-52 UniRef50_D0WNC5 Ribonuclease III n=1 Tax=Actinomyces sp. oral ta... 207 2e-52 UniRef50_B3QS76 Ribonuclease III n=1 Tax=Chloroherpeton thalassi... 207 2e-52 UniRef50_Q253V2 Ribonuclease 3 n=13 Tax=Chlamydiaceae RepID=RNC_... 206 4e-52 UniRef50_A4GHU1 Ribonuclease III n=1 Tax=uncultured marine bacte... 206 5e-52 UniRef50_UPI000180B1D8 PREDICTED: similar to ribonuclease III, n... 206 5e-52 UniRef50_B9L2H4 Ribonuclease III n=1 Tax=Thermomicrobium roseum ... 206 5e-52 UniRef50_C8NZK7 Ribonuclease III n=4 Tax=Erysipelotrichaceae Rep... 206 5e-52 UniRef50_D0WEA4 Ribonuclease III n=1 Tax=Slackia exigua ATCC 700... 205 7e-52 UniRef50_A9BIG2 Ribonuclease III n=1 Tax=Petrotoga mobilis SJ95 ... 205 7e-52 UniRef50_C1F8X7 Ribonuclease III n=1 Tax=Acidobacterium capsulat... 205 9e-52 UniRef50_C5CGL9 Ribonuclease III n=1 Tax=Kosmotoga olearia TBF 1... 205 1e-51 UniRef50_A4WVP5 Ribonuclease 3 n=44 Tax=Rhodobacterales RepID=RN... 205 1e-51 UniRef50_Q7KNF1 Drosha n=21 Tax=Neoptera RepID=Q7KNF1_DROME 204 1e-51 UniRef50_D1B5N5 Ribonuclease III n=1 Tax=Thermanaerovibrio acida... 204 2e-51 UniRef50_Q8G7H1 Ribonuclease 3 n=20 Tax=Bifidobacteriaceae RepID... 204 2e-51 UniRef50_C7MDJ8 RNAse III n=1 Tax=Brachybacterium faecium DSM 48... 203 3e-51 UniRef50_B4S3N5 Ribonuclease III n=2 Tax=Chlorobiaceae RepID=B4S... 203 4e-51 UniRef50_A0PQ48 Ribonuclease III Rnc n=2 Tax=Mycobacterium RepID... 202 7e-51 UniRef50_C7RGT7 Ribonuclease III n=4 Tax=Anaerococcus RepID=C7RG... 202 8e-51 UniRef50_A9FII1 Ribonuclease III n=2 Tax=Deltaproteobacteria Rep... 202 8e-51 UniRef50_A3EQH6 Ribonuclease III n=3 Tax=Leptospirillum RepID=A3... 201 2e-50 UniRef50_A8QES5 RNase3 domain containing protein n=1 Tax=Brugia ... 201 2e-50 UniRef50_B2UPF8 Ribonuclease III n=1 Tax=Akkermansia muciniphila... 200 2e-50 UniRef50_Q2RJX2 Ribonuclease 3 n=1 Tax=Moorella thermoacetica AT... 199 4e-50 UniRef50_O01326 Ribonuclease 3 n=3 Tax=Caenorhabditis RepID=RNC_... 199 5e-50 UniRef50_C5NVE5 Ribonuclease III n=1 Tax=Gemella haemolysans ATC... 199 6e-50 UniRef50_B1XKP4 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7... 198 1e-49 UniRef50_C4Q7C6 Ribonuclease III, putative n=2 Tax=Schistosoma m... 197 3e-49 UniRef50_Q1GTU3 Ribonuclease 3 n=1 Tax=Sphingopyxis alaskensis R... 196 4e-49 UniRef50_A4GK15 Ribonuclease III n=1 Tax=uncultured marine bacte... 195 8e-49 UniRef50_UPI0001C41B85 ribonuclease III Rnc n=1 Tax=Methanobrevi... 195 1e-48 UniRef50_Q8Z023 Ribonuclease 3 n=10 Tax=Cyanobacteria RepID=RNC_... 194 1e-48 UniRef50_C6XX79 Ribonuclease III n=4 Tax=Sphingobacteriaceae Rep... 194 2e-48 UniRef50_A9T140 Predicted protein n=1 Tax=Physcomitrella patens ... 194 2e-48 UniRef50_B0MUL3 Putative uncharacterized protein n=1 Tax=Alistip... 194 2e-48 UniRef50_B6W6L3 Putative uncharacterized protein n=1 Tax=Anaeroc... 193 4e-48 UniRef50_C7MY58 RNAse III n=13 Tax=Actinomycetales RepID=C7MY58_... 193 4e-48 UniRef50_Q1IJU6 Ribonuclease III n=1 Tax=Candidatus Koribacter v... 193 4e-48 UniRef50_A9NES4 DsRNA-specific ribonuclease III n=1 Tax=Acholepl... 193 5e-48 UniRef50_Q2NJY3 Ribonuclease 3 n=14 Tax=Candidatus Phytoplasma R... 192 7e-48 UniRef50_D1H8U7 Whole genome shotgun sequence of line PN40024, s... 192 8e-48 UniRef50_UPI0001982FEB PREDICTED: hypothetical protein n=1 Tax=V... 192 8e-48 UniRef50_A9YW43 Putative uncharacterized protein n=2 Tax=unclass... 192 9e-48 UniRef50_B8LN71 Putative uncharacterized protein n=1 Tax=Picea s... 191 1e-47 UniRef50_Q53844 Ribonuclease 3 n=3 Tax=Mollicutes RepID=RNC_SPICI 191 2e-47 UniRef50_C2MCM1 Ribonuclease III n=3 Tax=Porphyromonas uenonis 6... 190 2e-47 UniRef50_B2RFM9 Drosha protein n=1 Tax=Oikopleura dioica RepID=B... 190 3e-47 UniRef50_Q98514 Putative protein A464R n=6 Tax=Chlorovirus RepID... 189 5e-47 UniRef50_C5WU72 Putative uncharacterized protein Sb01g015670 n=2... 189 5e-47 UniRef50_B9HHX6 Dicer-like protein n=3 Tax=Malpighiales RepID=B9... 189 8e-47 UniRef50_B7P5Y8 Dicer-1, putative n=1 Tax=Ixodes scapularis RepI... 188 1e-46 UniRef50_Q9M9P8 T17B22.1 protein n=17 Tax=Eukaryota RepID=Q9M9P8... 187 2e-46 UniRef50_UPI0001C16B2C Ribonuclease III n=2 Tax=Nostocaceae RepI... 187 2e-46 UniRef50_C6VXT7 Ribonuclease III n=3 Tax=Flexibacteraceae RepID=... 187 3e-46 UniRef50_A9NW09 Putative uncharacterized protein n=1 Tax=Picea s... 187 3e-46 UniRef50_Q03VW5 Ribonuclease 3 n=9 Tax=Lactobacillales RepID=RNC... 186 4e-46 UniRef50_Q9UPY3 Endoribonuclease Dicer n=42 Tax=Euteleostomi Rep... 186 6e-46 UniRef50_Q83I82 Ribonuclease 3 n=2 Tax=Tropheryma whipplei RepID... 186 7e-46 UniRef50_Q69KJ0 Ribonuclease 3-like protein 3 n=2 Tax=Oryza sati... 185 9e-46 UniRef50_A7LFZ6 Endoribonuclease Dicer homolog 4 n=7 Tax=Poaceae... 184 1e-45 UniRef50_A6KZ76 Ribonuclease 3 n=30 Tax=Bacteroidales RepID=RNC_... 184 2e-45 UniRef50_D1Y4H6 Ribonuclease III n=1 Tax=Pyramidobacter piscolen... 183 3e-45 Sequences not found previously or not previously below threshold: >UniRef50_Q47WP5 Ribonuclease 3 n=310 Tax=Proteobacteria RepID=RNC_COLP3 Length = 266 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 143/226 (63%), Positives = 179/226 (79%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 +NP + RL +KLGY FN LL QALTHRSA HNERLEFLGDSIL +VIA ALY +F Sbjct: 3 INPHNLARLTKKLGYEFNEPLLLVQALTHRSAKGAHNERLEFLGDSILGFVIAEALYDKF 62 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P+ DEGD++RMR++LV+G TLAE+AR+F LGECL LGPGELKSGG RESIL D +EA+I Sbjct: 63 PKHDEGDLTRMRSSLVKGVTLAEVARDFNLGECLILGPGELKSGGHHRESILEDAIEAII 122 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G V+LDS+I+ + LIL+W++ RL I PG++QKDPKTRLQE+LQGR +PLPTY V+ Sbjct: 123 GAVYLDSNIECCKALILSWFERRLMVIKPGNEQKDPKTRLQEFLQGRKIPLPTYEVIDTT 182 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G++H+QEFT+ CQ S +SE V+ G+SRRKAEQ AA+Q L +E E Sbjct: 183 GQSHNQEFTVRCQTSVISEVVIAKGTSRRKAEQEAAQQILALIEKE 228 >UniRef50_B0USS1 Ribonuclease 3 n=5 Tax=Gammaproteobacteria RepID=RNC_HAES2 Length = 223 Score = 279 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 126/221 (57%), Positives = 174/221 (78%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 + +LQ+KLG+ F + + L+QALTHRSA++ +NERLEFLGDSIL++ I ALY +FP+ +E Sbjct: 3 LEKLQKKLGHQFTNLDYLKQALTHRSAAAFNNERLEFLGDSILNFAIGKALYEKFPKSNE 62 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G++SRMRATLV+ TLA +AR+ ELG+ L+LG GELKSGGFRRESIL+D VEALI ++L Sbjct: 63 GELSRMRATLVKEQTLAVVARQVELGDYLKLGAGELKSGGFRRESILSDCVEALIAAIYL 122 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ I + WYQ L++I PG+ QKDPKTRLQE+LQG L LP Y V++++G+AH+ Sbjct: 123 DAGIDVALARVYQWYQELLEQIKPGEAQKDPKTRLQEFLQGHRLKLPEYEVIEIKGDAHN 182 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Q F + C+V L++ V G G+SRRKAEQ AA+QA++KL+++ Sbjct: 183 QSFRVSCKVETLTDVVFGQGTSRRKAEQHAAQQAIEKLKIK 223 >UniRef50_UPI0000E0E146 ribonuclease III n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E146 Length = 241 Score = 278 bits (712), Expect = 9e-74, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 156/226 (69%), Gaps = 2/226 (0%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 ++P V +LQR + Y FN LL+QALTH+SA +HNERLEFLGD++L ++ L+ F Sbjct: 18 IDPFV--KLQRLIDYQFNDVSLLKQALTHKSAHRQHNERLEFLGDAVLGMIVGEHLFKAF 75 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++RMR+ +V+G+TLAE+A E LGE ++LG GELKSGG +R SILAD VE++I Sbjct: 76 PNSPEGKLTRMRSAIVKGDTLAEIALEKGLGEFIQLGAGELKSGGKQRYSILADVVESII 135 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD+ + I W+ R+ ++ P KD KTRLQEYLQ R + LP Y VV ++ Sbjct: 136 GAIYLDAGMNQCYDFIHAWFGARIAKLDPDVHPKDAKTRLQEYLQSRGIELPVYEVVDIK 195 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G+ H+Q FT+ C LS+P+ G+SR++AEQ AA+ L+KL+ + Sbjct: 196 GKDHNQTFTVSCNTVTLSDPIQAQGASRKRAEQIAAQLTLEKLQDD 241 >UniRef50_Q7VRR0 Ribonuclease 3 n=8 Tax=Gammaproteobacteria RepID=RNC_BLOFL Length = 232 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 149/223 (66%), Positives = 179/223 (80%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 + I IN LQ+KLGY F+ +LL +ALTHRS S+KHNERLEFLGDSIL+Y I N LYHR+ Sbjct: 4 IKCIEINLLQKKLGYFFHTVDLLLRALTHRSFSNKHNERLEFLGDSILNYSITNILYHRY 63 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 +DEGDMSR+R++LV TL ELA+EF+LG CL+LG GELK+ G+ RESILADTVEA+I Sbjct: 64 NHMDEGDMSRIRSSLVCSRTLVELAKEFKLGNCLKLGQGELKNKGYNRESILADTVEAII 123 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 GG+FLDS+I+T+E LI WYQ RL++I DKQKDPKTRLQEYLQ HLPLP Y + QV+ Sbjct: 124 GGIFLDSNIKTIEMLIAFWYQFRLNKIDLEDKQKDPKTRLQEYLQHHHLPLPIYCINQVQ 183 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G+AHDQ F ++CQVS L V+G GSSRRKAEQ AAE ALK L Sbjct: 184 GQAHDQIFIMNCQVSSLKYSVMGRGSSRRKAEQDAAENALKFL 226 >UniRef50_A4J683 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_DESRM Length = 246 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 91/225 (40%), Positives = 135/225 (60%), Gaps = 8/225 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHR 59 NRL+ +LG+ +++ LL QALTH S + HN+RLEFLGD++L +I+ LY Sbjct: 9 NRLKTRLGFKWHNPTLLIQALTHSSCVHENRGHGLCHNQRLEFLGDAVLELIISEHLYKM 68 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EG++++MRA+ V +LA++AR +LG CLR+G GE +SGG R SILAD EAL Sbjct: 69 FPDRTEGELTKMRASSVCEPSLAKVARGLDLGRCLRMGRGEERSGGRERPSILADAFEAL 128 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G ++LD ++ +LN + +D++ G +D KT LQE LQ TY ++ Sbjct: 129 LGAIYLDQGLEISRHFVLNCLSSIIDDVVAGRLDRDYKTELQEILQQSSPDPLTYTIMDE 188 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G HD+ FT + G+G S+++AEQ AA+ A + LE Sbjct: 189 SGPDHDKTFTAGV-IYKGKVIGKGSGHSKKEAEQQAAKDAFQHLE 232 >UniRef50_Q2Y871 Ribonuclease III n=2 Tax=Proteobacteria RepID=Q2Y871_NITMU Length = 230 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 116/218 (53%), Positives = 148/218 (67%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 L RKLGYTF ELL+QALTHRS S HNERLEFLGD++L+ +A ++H FP + EG Sbjct: 11 AALCRKLGYTFRRPELLRQALTHRSHSIPHNERLEFLGDAVLNCAVAGLIFHHFPDLSEG 70 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 +SR+RA LV LAELA+ ELG+ +R G GELKSGG +R SILAD +EA+IG ++LD Sbjct: 71 SLSRIRANLVNQKMLAELAQTLELGKLIRFGEGELKSGGDKRPSILADALEAVIGAIYLD 130 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + + EK + N + L E++ KDPKT LQEYLQ R L LP Y VV RGEAH Q Sbjct: 131 AGFEQAEKTVENLFIPSLGELNTHALGKDPKTLLQEYLQSRKLALPRYAVVATRGEAHQQ 190 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 +F + C +S +G G+SRR AEQ AA QA ++L+ Sbjct: 191 QFQVECVISRPQIRTLGEGTSRRSAEQHAARQAYEQLQ 228 >UniRef50_B2I604 Ribonuclease 3 n=12 Tax=Bacteria RepID=RNC_XYLF2 Length = 227 Score = 269 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 110/215 (51%), Positives = 148/215 (68%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 Q+++GY F LL QAL HRSA + HNERLEFLGDS+++ +IA AL+ R+PR DEG ++ Sbjct: 10 QQRIGYVFTDPSLLLQALRHRSAGTPHNERLEFLGDSVVNLLIAEALFQRWPRADEGALT 69 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 R R+ LVR +LA +AR +LGE L LGPGELKSGG RR+SILAD VEA+I ++LD+D+ Sbjct: 70 RARSELVRETSLASIARTMQLGEQLILGPGELKSGGHRRDSILADAVEAVIAAIYLDADL 129 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 T ++L W++T L + G +KDPKTRLQE+LQ R LP Y ++ G+ H + F Sbjct: 130 ATCRTVVLPWFETALTALPVGKPEKDPKTRLQEWLQARQWSLPVYELIFESGDPHTKHFR 189 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + C + L G GSSRR AEQ AA A+ +L+ Sbjct: 190 VSCTLGELKLRTEGEGSSRRLAEQDAASHAIDQLD 224 >UniRef50_Q1YS28 Ribonuclease III n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS28_9GAMM Length = 225 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 112/218 (51%), Positives = 149/218 (68%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 +LQ +L Y F+ +LL AL+HRS S +NERLEFLGD++L I++ L+ RFP EG Sbjct: 6 KQLQDRLQYQFSDPQLLTLALSHRSCGSNNNERLEFLGDAVLGMAISSFLFQRFPEAREG 65 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 D+SR+R+ +VR +LAE+AR+ +LG L LGPGE+KSGG RR+SIL DTVEAL+G VFLD Sbjct: 66 DLSRIRSQVVRAESLAEIARKLDLGPELLLGPGEMKSGGHRRDSILGDTVEALLGAVFLD 125 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + VE + NW+ L+ ++ KD KT LQE+LQ R PLP Y VV+ GE H + Sbjct: 126 QGLVAVEACVQNWFGASLNTLTLDTPVKDAKTALQEWLQARGKPLPEYRVVKTEGEDHSR 185 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 FT+ C++ + E T SSRRKAEQ AE+ +KKLE Sbjct: 186 LFTMSCKIDAVDETAEATASSRRKAEQLVAEKLVKKLE 223 >UniRef50_Q3KHL9 Ribonuclease 3 n=16 Tax=Gammaproteobacteria RepID=RNC_PSEPF Length = 229 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 115/210 (54%), Positives = 151/210 (71%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRV 63 + ++RL+R+LGYTF QEL+ ALTHRS + ++NERLEFLGD+IL++V AL+ RFP Sbjct: 3 VSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFPLA 62 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG +SR+RA LV+G TLA LAR F+LG+ LRLG GELKSGGFRRESILAD +EALIG + Sbjct: 63 REGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIGAI 122 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 +LD+ ++ + +L W + ++ D KDPKTRLQE+LQ R LP Y VV ++GE Sbjct: 123 YLDAGMEVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQGEP 182 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 H + F + C+V L+E G G SRR AEQ Sbjct: 183 HCRTFFVECEVVLLNEKSRGQGVSRRIAEQ 212 >UniRef50_D0L0J9 Ribonuclease III n=2 Tax=Gammaproteobacteria RepID=D0L0J9_HALNC Length = 243 Score = 263 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 113/217 (52%), Positives = 147/217 (67%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 +L + +G TF ELL+ AL HRSA + +NERLEFLGD++L+ VIAN LY + EG Sbjct: 15 EKLAQHIGITFASPELLEMALRHRSAGNMNNERLEFLGDAVLNLVIANQLYTMHSKATEG 74 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++SR RA+LVR +LA +ARE +LG L LGPGELKSGGFRR+SILAD +EA IG V+LD Sbjct: 75 ELSRWRASLVREESLAVIARELDLGSYLVLGPGELKSGGFRRDSILADALEATIGAVYLD 134 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + L++ ++ L ++ KDPKTRLQE+LQG LP+Y V +RG+AH Q Sbjct: 135 QGFDVAQSLLVRLFERMLQDLPDAASLKDPKTRLQEWLQGSKRELPSYEVTTIRGQAHKQ 194 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 F + C +S + VG GSSRRKAEQAAAE + L Sbjct: 195 VFEVTCTLSDTQQTAVGRGSSRRKAEQAAAESMFEAL 231 >UniRef50_C8W586 Ribonuclease III n=2 Tax=Clostridia RepID=C8W586_DESAS Length = 259 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 86/229 (37%), Positives = 136/229 (59%), Gaps = 8/229 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIAN 54 N I +L +++G +N + LL QALTH S + +N+RLEFLGD++L +++ Sbjct: 4 NQDNIMQLMQQVGVAWNDENLLWQALTHSSYVYESGSAAHTNNQRLEFLGDAVLELLVSG 63 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY +P EG+++++RA +V +LA++AR+ LG CLR+G GE +SGG R SILAD Sbjct: 64 YLYSSYPECAEGELTKLRAAIVCEPSLAKVARQLNLGYCLRMGKGEERSGGRERPSILAD 123 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 + EAL+G V+LD ++ L + ++++ G +D KT LQE LQ + +Y Sbjct: 124 SFEALLGAVYLDQGLEKTRMFALKFLAPVINDVLEGRVDRDYKTELQEMLQKKSPEPISY 183 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 +++ G H + FT G+ GTG S+++AEQ AA+ AL +L Sbjct: 184 VILNEEGPDHQKLFTAGVVYCGI-IIGQGTGRSKKEAEQQAAKIALLEL 231 >UniRef50_UPI0000E87AF2 ribonuclease III n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87AF2 Length = 243 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 100/223 (44%), Positives = 148/223 (66%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 MN I +++ LG+TF + L++ ALTHRSA ++NERLEFLGD IL++++A LY RF Sbjct: 15 MNSNQIEQIESILGHTFKDKALIKIALTHRSAKGENNERLEFLGDGILNFIVAELLYVRF 74 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 ++ EGD+SR+R+ LV+ +TL ++A+ +G+ L LG GELKS G+RR SILAD++EA+I Sbjct: 75 QQLSEGDLSRLRSQLVKESTLCDIAKNLTIGDFLLLGEGELKSAGWRRPSILADSLEAII 134 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD I V+ I + + I P KD K+ LQE+LQG+ + +P Y V+++ Sbjct: 135 AAIYLDDGIGKVKSFIERRFNEHIITIDPNKIHKDDKSLLQEFLQGKKIAIPEYTVIEIE 194 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 GE H Q F + C++ L+ +G G SR+ AEQ AA AL L Sbjct: 195 GEPHAQVFEVKCRIPKLNIEKIGKGPSRKIAEQNAANLALIYL 237 >UniRef50_A3EU88 Ribonuclease III n=2 Tax=Leptospirillum sp. Group II RepID=A3EU88_9BACT Length = 247 Score = 259 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 81/232 (34%), Positives = 131/232 (56%), Gaps = 10/232 (4%) Query: 1 MNP-IVINRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYV 51 M P ++ L+ +L Y F +LL++A TH+S ++ +NERLEFLGD++L V Sbjct: 1 MKPHRDLSELEDRLRYRFRKIDLLEEATTHKSFMNEGRRLGVTRNNERLEFLGDTVLGLV 60 Query: 52 IANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESI 111 +A L +P+ EG +S+ + +V TLA ++R +G L +G GE + G + S+ Sbjct: 61 VAEYLMVTYPKYPEGILSKFKGRVVSEPTLASVSRALGIGGFLLIGKGEELTQGREKSSL 120 Query: 112 LADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL 171 LAD +EA+I ++LDS + I+ +++ +++ D +D KT LQEY Q L Sbjct: 121 LADAMEAVIAAIYLDSGLDAARTFIIGHFRSVIEQTVHEDSIQDYKTDLQEYCQRELETL 180 Query: 172 PTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 P Y V+ RG H +EF + + G G+G S+++AEQ AA+ AL +L Sbjct: 181 PVYQVMDQRGPDHQKEFDVAVLIRG-KIYGEGSGKSKKEAEQKAAKDALSRL 231 >UniRef50_Q8R9W3 Ribonuclease 3 n=37 Tax=Bacteria RepID=RNC_THETN Length = 228 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 93/225 (41%), Positives = 140/225 (62%), Gaps = 7/225 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 ++ L++K+ Y F + LL +ALTH S + + NERLEFLGDS+LS VI+ LY Sbjct: 1 MLTYLEQKINYEFKDKTLLLEALTHSSWAHEGKNEKVSNERLEFLGDSVLSLVISEYLYK 60 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++EG +S+ RA +V +LA AR+ ELG LR+G GE SGG R+SILAD +EA Sbjct: 61 NRKDLEEGSLSKYRAEIVCEPSLARCARKIELGSFLRMGKGEEISGGRDRDSILADAMEA 120 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+ V+LD ++ V ++IL+ ++ +DE+ G +D KTRLQE +Q + TY +V+ Sbjct: 121 LLAAVYLDGGLEAVRRVILDLFKEIIDEVLKGIIYRDYKTRLQEVVQSMEVGKITYELVE 180 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H++ F ++ G +G G S++++EQAAA +AL KL Sbjct: 181 EIGPDHNKTFVTQVKI-GDVVLGIGQGKSKKESEQAAAMEALSKL 224 >UniRef50_C1D7L4 Rnc n=2 Tax=Proteobacteria RepID=C1D7L4_LARHH Length = 238 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 141/224 (62%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPR 62 P I+RL + +G+ F LL++ALTHRS +NER EF+GD IL+Y IA L+ FP Sbjct: 4 PQPIDRLMQHIGHLFTSPALLKEALTHRSYGQPNNERFEFVGDGILNYTIARMLFDAFPE 63 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EG +SR+RA LV TLAE+ARE LG+CL LG GE KSGG R SILAD +EA+ Sbjct: 64 LSEGQLSRLRANLVNQATLAEIARELTLGDCLFLGDGERKSGGHDRPSILADAMEAIFAA 123 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 V LD+D E ++ Y R+ I + KD KTRLQE LQ R LPLP Y ++ G+ Sbjct: 124 VCLDADFAVAENVVRRLYAARVAGIDLNRQAKDAKTRLQEMLQARRLPLPAYRILNQSGD 183 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 AH +F + C + L G GSSRR AEQ AAE+A++ +E + Sbjct: 184 AHLSQFEVACDIPQLGLATCGEGSSRRAAEQLAAERAIEAIEAQ 227 >UniRef50_Q0AF70 Ribonuclease 3 n=4 Tax=Proteobacteria RepID=RNC_NITEC Length = 245 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 99/213 (46%), Positives = 140/213 (65%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 +KLGYTF +LLQ+ALTHRS +NERLEFLGDS+L+ ++ L+ RF + EGD+ Sbjct: 27 FSQKLGYTFKQPDLLQEALTHRSLGFPNNERLEFLGDSVLNCAVSTLLFKRFLLLPEGDL 86 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD 128 +R+RA V + L +LA +GE + LG GE KSGG +R SILA+ +EA+IG ++L+S Sbjct: 87 TRLRANFVNQDALHQLASALGIGELILLGDGERKSGGHQRPSILANAMEAIIGAIYLESG 146 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEF 188 + V+++I+ Y L+++ P KDPKT LQEYLQ R + LP Y + RG+AH Q F Sbjct: 147 FEKVDQVIVALYDPLLNQLDPDLFGKDPKTLLQEYLQSRKVDLPEYSTLLTRGDAHAQVF 206 Query: 189 TIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 + C + + G G+SRR+AEQ AA +A K Sbjct: 207 HVECVIPEFAIRTSGEGTSRRRAEQEAARRAYK 239 >UniRef50_A9KFA0 Ribonuclease 3 n=6 Tax=Coxiella burnetii RepID=RNC_COXBN Length = 233 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 110/219 (50%), Positives = 162/219 (73%), Gaps = 1/219 (0%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 +N+L +LG+ FN+ ELL+ ALTHRS+ + +NERLEFLGDS+L ++IA+ LY R P+ E Sbjct: 4 LNKLMERLGHQFNNLELLKIALTHRSSGADNNERLEFLGDSVLGFIIASELYQRRPQARE 63 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 GD+SRMRA++V G+ LA+++ + + E L+LG GE KSGG RR SILAD +EA++G +++ Sbjct: 64 GDLSRMRASMVNGDELAQMSTKLGINEYLQLGVGEQKSGGKRRRSILADALEAIVGAIYI 123 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ ++T + +LNWY R+D++S +KD K+ LQE+LQ R LPLPTY V++ GEAH Sbjct: 124 DAGLETCRRCVLNWYGERVDDLSKLSPKKDAKSLLQEWLQARRLPLPTYE-VKITGEAHA 182 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 Q FT++C V GL G ++RR+AEQ AA++ L+ L+ Sbjct: 183 QTFTVNCYVKGLPHKTEGVNTTRRRAEQIAAKRFLELLD 221 >UniRef50_Q3AC58 Ribonuclease 3 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RNC_CARHZ Length = 235 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 87/233 (37%), Positives = 132/233 (56%), Gaps = 8/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 M+ + L++ LG+ FN+ +L A+TH S + +H NERLEFLGD++L I+ Sbjct: 1 MDKENLISLEKILGFNFNNPSILLSAITHPSYAFEHPEEGIEHNERLEFLGDAVLELFIS 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 + L+ FP+ EGD++++R+ LV +L ELA + L + LRLG GE K+GG +R S LA Sbjct: 61 DYLFRTFPQKSEGDLTKLRSRLVCAESLYELAFKINLDKFLRLGKGEFKAGGNQRMSNLA 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 + VEA+IG V+ D I+ I Y +L + KD KT LQE LQ + Sbjct: 121 NAVEAVIGAVYFDCGIEAAFSFITRLYGEKLKPENLEQLPKDEKTTLQELLQKEKNNVLR 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y ++ G H + FT ++ G G S+++AEQ AA++AL+ L+ E Sbjct: 181 YEILLEEGPPHQKIFTAGVIIND-KLIATGRGKSKKEAEQEAAKKALELLKNE 232 >UniRef50_C6HXB9 Ribonuclease III n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXB9_9BACT Length = 254 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 126/223 (56%), Gaps = 9/223 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANALYHRF 60 L+ +LGY F+ E L++A H+S +++ NERLEFLGD++L V+A L + Sbjct: 14 LEERLGYRFSSLERLEEATIHKSFTNETKKGGVRRDNERLEFLGDTVLGLVVAEYLMRLW 73 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG +S+++ +V +LA++AR LG L +G GE + G + SIL+D +EA+I Sbjct: 74 PDSPEGVLSKLKGRIVSEPSLAQIARNIGLGRYLLIGRGEEMTQGREKNSILSDALEAVI 133 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++ D + + IL ++ + +S G+ D KT+LQEY Q LP Y++ Sbjct: 134 AAIYQDGGLDAARQFILREFRELFESVSRGESVADYKTQLQEYCQRELETLPQYVITGQS 193 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F + ++ + G G S+++AEQ AA+ AL+++ Sbjct: 194 GPDHQKVFEVAVRIRDKNW-GEGQGHSKKEAEQKAAKSALERI 235 >UniRef50_A5D1H6 Ribonuclease 3 n=3 Tax=Peptococcaceae RepID=RNC_PELTS Length = 241 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 135/224 (60%), Gaps = 8/224 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 + L+ +LG + + LL +ALTH S + ++ N+RLEFLGD++L +++ LY Sbjct: 8 LTLLKNRLGIAWRDEGLLTRALTHSSFTYENRQNGLENNQRLEFLGDAVLELAVSDYLYR 67 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P +DEGD++++RA++V +LA +ARE ELG CL +G GE +SGG R SILAD EA Sbjct: 68 SKPEMDEGDLTKLRASVVCEPSLARVARELELGTCLYMGKGEERSGGRDRPSILADAFEA 127 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+G V+LD ++ L + + + ++ G ++D KT LQE +Q R Y++++ Sbjct: 128 LLGAVYLDQGLEKAAGLAIKYLAPLIGDVLEGRLERDYKTELQELVQQRGGEQVQYVILK 187 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G H + FT G+ GTG S+++AEQ AA++AL K Sbjct: 188 EEGPDHHKSFTAGVLYRGV-LVGQGTGRSKKEAEQQAAKKALMK 230 >UniRef50_A0L633 Ribonuclease 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=RNC_MAGSM Length = 246 Score = 253 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 99/232 (42%), Positives = 141/232 (60%), Gaps = 12/232 (5%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSA-----------SSKHNERLEFLGDSILSYV 51 P + RL++ L Y F +LLQ ALTHRSA ++ HNERLEFLGDS+L+ + Sbjct: 7 PSGLERLEQALDYRFTQSDLLQLALTHRSAPLDGSKAGEVVATTHNERLEFLGDSVLNLI 66 Query: 52 IANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESI 111 +++ LY RF V EG +S+ RA LV +L+E+A++ ELG LR+G GE KSGG + SI Sbjct: 67 VSHRLYKRFGEVPEGQLSQWRAMLVNTRSLSEVAKDLELGRYLRMGRGEAKSGGREKYSI 126 Query: 112 LADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL 171 L + +EAL+G ++LD + E+++ + ++ I P + KD KT LQEYLQ R L Sbjct: 127 LGNALEALLGAIYLDGGFEAAERVVDRLFAHQVAGIEPEQQGKDYKTLLQEYLQARGEAL 186 Query: 172 PTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 P Y V+ G H++ F + C G G S+R+AEQ AA+QAL+ L Sbjct: 187 PIYAVLSAEGPPHERVFVVSCH-PREQLCGHGQGRSKREAEQHAAQQALELL 237 >UniRef50_Q47S78 Ribonuclease 3 n=73 Tax=Actinobacteria (class) RepID=RNC_THEFY Length = 240 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 8/230 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANA 55 ++P + Q +G ++L +ALTHRS + ++ NERLEFLGDS+L V+ + Sbjct: 5 LSPAEVREFQETVGVEIA-PDILTRALTHRSYAYENGGLPTNERLEFLGDSVLGLVVTDT 63 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY P + EG ++++RA +V LA++ARE +G +RLG GE +GG + SILADT Sbjct: 64 LYRTHPDLSEGQLAKLRAAVVNMRALADVARELGIGRYVRLGRGEEATGGRDKSSILADT 123 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EALIG V+LD + +L+ + + S D KT LQE L +P Y Sbjct: 124 LEALIGAVYLDRGLDEASELVHRLFDPLIARASGLGAGLDWKTSLQELTAAELLGVPEY- 182 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 VV+ G H + F +V+G + G G S+++AEQ AAE A K + Sbjct: 183 VVEESGPDHQKTFRATVRVAGQTY-GSGEGRSKKEAEQQAAESAWKAIRA 231 >UniRef50_B1LTR3 Ribonuclease III n=11 Tax=Alphaproteobacteria RepID=B1LTR3_METRJ Length = 259 Score = 252 bits (644), Expect = 7e-66, Method: Composition-based stats. Identities = 92/222 (41%), Positives = 134/222 (60%), Gaps = 6/222 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRF 60 + L+ ++G++F Q+LL +ALTH S +S +RLEFLGD +L +A+ LY F Sbjct: 26 PPLTALEERIGHSFGDQDLLTRALTHTSKASGRGGSYQRLEFLGDRVLGLAVADRLYGAF 85 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P DEGD+SR A LVR T A +A +E+G L LG GE+ GG R ++ILAD EA++ Sbjct: 86 PEADEGDLSRRLAALVRRETCAAVAASWEVGPHLILGQGEVMGGGRRNQTILADVCEAIL 145 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD+ ++ ++ E + + +D K+ LQE+ GR LP+PTY VV+ Sbjct: 146 GAIYLDAGFDAARAVVETHFRP--GEPTAAARGRDAKSALQEWAMGRSLPIPTYAVVERT 203 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G H F I QV GL EP +G G+S+R AEQAAA +++ Sbjct: 204 GPDHAPRFRIAVQVEGL-EPGLGDGTSKRIAEQAAARALMER 244 >UniRef50_A5EV51 Ribonuclease III n=2 Tax=Cardiobacteriaceae RepID=A5EV51_DICNV Length = 233 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 110/209 (52%), Positives = 145/209 (69%), Gaps = 2/209 (0%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDM 68 L+ LGY+F + ELLQ+ALTHRS S+ HNER E+LGD++L VI+ ALY R+P EGD+ Sbjct: 12 LEHALGYSFQNPELLQRALTHRSFSADHNERFEYLGDALLETVISVALYRRYPESPEGDL 71 Query: 69 SRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSD 128 +R+RA +V+ ++LA +A++ +LG LRLG GELKSGG RRESILAD VEA+I V+LDSD Sbjct: 72 TRLRAAIVKSSSLAVIAKQLDLGRYLRLGSGELKSGGKRRESILADAVEAIIAAVYLDSD 131 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEF 188 E++ L + + + + KDPKTRLQEYLQ R LPLP Y +V+ +G H + F Sbjct: 132 FYRCEQITLALFAPAIAALPDVEALKDPKTRLQEYLQSRDLPLPVYELVEEKGPEHAKIF 191 Query: 189 TIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 TI + T SSR+KAEQAAAE Sbjct: 192 TISAK--SERFCTTATASSRKKAEQAAAE 218 >UniRef50_Q67PF5 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_SYMTH Length = 235 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 7/225 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANA 55 ++P LGY F + LL +ALTH + +++H NERLEFLGDS+L VIA Sbjct: 6 LDPGRRAWCAEALGYEFRDESLLLEALTHTTYANEHPRARANERLEFLGDSVLGMVIAAH 65 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY R+P + EG+++++RA +V +LAE AR +G +R G GE SG R+S L+D Sbjct: 66 LYERYPDLPEGELTKIRAAVVCEPSLAERARVLGIGRHMRFGRGEAVSG-RDRDSTLSDA 124 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EA++G ++LD ++ ++ +L ++ G + D KT+LQE LQ + P Y Sbjct: 125 FEAVVGALYLDGGLEAAQRFVLRELGQLVEAARQGLVRVDYKTQLQEQLQRQGAAAPQYR 184 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 ++ G AH + F + G G G ++++AEQ AA QAL Sbjct: 185 LLVEEGPAHLRRFQVGVYFEG-RLLGTGWGRNKKEAEQEAARQAL 228 >UniRef50_C9RJ88 Ribonuclease III n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ88_FIBSS Length = 270 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 82/222 (36%), Positives = 130/222 (58%), Gaps = 8/222 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANALYHRFP 61 L+ KLGY F ELL AL HRS + +NERLEFLGDS+L+ + LY +P Sbjct: 23 LEAKLGYRFRDPELLAHALVHRSFLVGKDVPYASNNERLEFLGDSVLNMLTTEFLYRTYP 82 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG++S+ ++ +V G+ A+ ++E++L E +++G E K GG +ESILAD EA++G Sbjct: 83 SDPEGELSKRKSAIVSGHACAQSSKEWDLSEYVKIGKSEAKMGGRGKESILADAYEAVLG 142 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+LD ++ V ++ ++ R+ EI + K+ L E+ QG+ P Y++V G Sbjct: 143 AVYLDGGLEEVRAILNKFHFPRVQEIISATDFVNYKSELLEFCQGKLRCSPEYVIVGEEG 202 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H + FT+ V+G S G G +++KAEQ A+ +L+ L Sbjct: 203 PEHQKVFTVEVVVNGKSY-ARGQGPNKKKAEQEASRLSLETL 243 >UniRef50_Q3A4Q8 Ribonuclease 3 n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RNC_PELCD Length = 232 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 84/223 (37%), Positives = 135/223 (60%), Gaps = 8/223 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFP 61 L+ + Y F++Q LL +ALTH+S S++ NERLEFLGD++L V+++ ++ FP Sbjct: 10 LEDTIDYVFDNQALLLEALTHKSFSNEQNDRTEPDNERLEFLGDAVLGVVVSHYIFRTFP 69 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG+++R+R+ +V L + + LG+ +RLG GE +SGG ++ S+LA+T+EAL+G Sbjct: 70 HLPEGELTRIRSEVVSEKGLTVIGKAICLGDYMRLGKGEERSGGRQKSSLLANTMEALLG 129 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 VF D +V ++I + + + D KTRLQE LQ R +P Y+++ G Sbjct: 130 AVFCDGGFDSVRRVIEALFIPHIQRAARRKTGVDYKTRLQERLQARFGDVPQYVLIHADG 189 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 H + +++ G S G G S++ AEQAAA+QAL+ LE Sbjct: 190 PPHQRSYSVEAHFRG-SCIGQGQGRSKKSAEQAAAKQALEYLE 231 >UniRef50_D1AY72 Ribonuclease III n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AY72_STRM9 Length = 233 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 131/233 (56%), Gaps = 8/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN-------ERLEFLGDSILSYVIA 53 M + + +L K+ YTF +++LL +ALTH S ++HN ERLEFLGDS++ + Sbjct: 1 MKKMDLEKLMSKINYTFKNKKLLLEALTHSSYVNEHNFPNIKDNERLEFLGDSVMDLITT 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 +Y + +EG++S++++ ++ + ++R+ LG + L GE SGG R S+L Sbjct: 61 EYIYKNNLKSNEGELSKIKSQIISETVFSTISRDLNLGNYIFLSNGENMSGGRERNSVLG 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA++G ++LDSD T ++L +++++ + + D K+ LQE Q ++ P Sbjct: 121 DVFEAMVGAIYLDSDYATTRDVVLKLLESKINNLDKIEWVSDYKSALQEITQLKYKVTPI 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y V+ G HD+ F I +V G S++ AE+ AA+QA++KL E Sbjct: 181 YTVLSEIGPDHDKTFEIEVRVE-ERLYGKGVAKSKKMAEKIAAKQAIEKLNKE 232 >UniRef50_Q3SH50 Ribonuclease 3 n=11 Tax=Proteobacteria RepID=RNC_THIDA Length = 226 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 111/208 (53%), Positives = 140/208 (67%), Gaps = 1/208 (0%) Query: 1 MNPIVIN-RLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHR 59 MN +++ RLQ+ LGYTF+ LLQQALTHRS + +NERLEFLGDS+L+ +A ALY Sbjct: 1 MNNALLDARLQQALGYTFSRSGLLQQALTHRSYGALNNERLEFLGDSVLNCSVARALYDA 60 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP + EG +SR+RA LVR TLAE+A LG+ LRLG GELKSGGFRR SILAD +E+L Sbjct: 61 FPDLPEGSLSRLRANLVRQETLAEIAGALRLGDSLRLGEGELKSGGFRRPSILADALESL 120 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 G VFLD+ ++++ + + +I P KDPKTRLQE LQ R LPLP Y +V Sbjct: 121 FGAVFLDAGFDEAQRVVRRLFDPLVAQIDPKASGKDPKTRLQEILQSRRLPLPEYRLVGT 180 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 GEAHDQ F + C ++ GTG S Sbjct: 181 EGEAHDQSFIVECLLAKPVLSTRGTGKS 208 >UniRef50_B8CWW9 Ribonuclease III n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWW9_HALOH Length = 236 Score = 249 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 89/217 (41%), Positives = 135/217 (62%), Gaps = 8/217 (3%) Query: 14 GYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRVDEG 66 FN LLQ+A+TH+S + NERLEFLGDS+LS VI+ LY FP +EG Sbjct: 18 NIRFNDISLLQKAVTHKSFVHEKSDPDLEDNERLEFLGDSVLSIVISTYLYKNFPEYNEG 77 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++++MRA +V + LA ARE LG+ + +G GE +GG RESILADT+EA+IG ++LD Sbjct: 78 ELAKMRAYIVSSSHLACKARELGLGKYILMGKGEELNGGRERESILADTLEAVIGAIYLD 137 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 T+ L++N+++ + ++ G+ +D KT LQE++Q Y ++ G H++ Sbjct: 138 QGFNTITDLLINFFKDDVKKLDQGNIIRDYKTYLQEFIQKDGSCEIKYNIINEYGPDHNK 197 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 +F + +V+G E GTG S+++AEQ AA+ AL L Sbjct: 198 KFEVGVKVNG-KELGRGTGFSKKEAEQKAAKDALSNL 233 >UniRef50_Q2LVR4 Ribonuclease III n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVR4_SYNAS Length = 240 Score = 249 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 83/226 (36%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALY 57 + +L+ L F LL AL HRS +++ NERLEFLGD++L I++ L Sbjct: 8 ALKKLESHLSCAFRDITLLDNALVHRSYVNENPSLSFADNERLEFLGDAVLELCISDLLM 67 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 FP EG +S++RA++V LAELA++ +G + LG GE SGG + SILA+T+E Sbjct: 68 KAFPDYSEGQLSKLRASVVNEQPLAELAKKCRIGSFILLGKGEESSGGRSKPSILANTME 127 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+ VFLD + + + ++E + KD KT LQE Q R +P Y ++ Sbjct: 128 AITAAVFLDGGFDRAYEFVRRLFTPLIEEGNRSATYKDYKTTLQELSQNRFREIPRYRLI 187 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G HD+ F + G+ E G G S+++AEQ AA +AL +L Sbjct: 188 GEYGPDHDKLFESGLSIPGIIET-TGKGKSKKEAEQHAAHKALDEL 232 >UniRef50_C0GHL1 Ribonuclease III n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHL1_9FIRM Length = 233 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 85/233 (36%), Positives = 133/233 (57%), Gaps = 8/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN-------ERLEFLGDSILSYVIA 53 M +N L ++L ++E+ QALTH S + +HN ERLEFLGD++L VI+ Sbjct: 1 MGKKDLNYLFKQLNIEPKNREIYIQALTHSSYAHEHNLGSHAHNERLEFLGDAVLELVIS 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 AL+ RFP + EG ++R RA +V ++L ++A ELG+ LRLG GE SGG +R S+LA Sbjct: 61 EALFKRFPLLPEGKLTRFRAGMVCEDSLFKIANSLELGKYLRLGKGEAASGGRQRPSLLA 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA++G ++LD V++ + + ++++ G + D KT +QEY Q P Sbjct: 121 DAFEAMLGAMYLDQGFYVVQETVTGIFAPLFEDMAKGSMRHDYKTLMQEYTQASLATTPE 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y +V +G H + F ++ G+G S+++AEQ AA A ++L E Sbjct: 181 YRIVAEQGPDHSKVFVAQLLLN-REVYGEGSGRSKKEAEQEAARVAYQQLRAE 232 >UniRef50_Q5LZ68 Ribonuclease 3 n=100 Tax=cellular organisms RepID=RNC_STRT1 Length = 237 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 91/224 (40%), Positives = 133/224 (59%), Gaps = 9/224 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHR 59 +L++ G F+ ++LL+ A TH S +++H NERLEFLGD+ L VI+ LY+R Sbjct: 14 QKLEQDFGIVFSQKDLLETAFTHTSYANEHRLLNISHNERLEFLGDAALQLVISVYLYNR 73 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P EG+MS+MR+T+VR +LA + + +RLG GE KSGG R +IL D EA Sbjct: 74 YPNKPEGEMSKMRSTIVREESLAGFTKACGFEQYIRLGKGEEKSGGRERATILGDLWEAF 133 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G ++LD + VEK + ++++ + D+ D KT LQE LQ TY V+ Sbjct: 134 LGALYLDQGLPAVEKFLNQVMIPQVEKGN-FDRVIDYKTALQERLQVNGKVDITYTVIDE 192 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G AH +EFT+ V G E G G S++ AEQAAA+ AL++L Sbjct: 193 SGPAHAKEFTMQVAVDG-KELSTGLGKSKKLAEQAAAKSALEQL 235 >UniRef50_D0STQ6 Ribonuclease III n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STQ6_ACILW Length = 232 Score = 246 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 117/222 (52%), Positives = 156/222 (70%), Gaps = 3/222 (1%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDE 65 RL +++GY F +LL+ ALTHRS S KHN ERLEFLGDS+L +IAN L++ +P +E Sbjct: 11 ERLAKRIGYQFKQADLLKLALTHRSVSHKHNYERLEFLGDSLLGMIIANYLFNAYPSENE 70 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G ++RMRATLVR L ++A + +L + L L GELKSGG RESILADTVEA+IG +++ Sbjct: 71 GRLTRMRATLVRQEALGKIANDLKLSQNLILSTGELKSGGHHRESILADTVEAIIGAIYV 130 Query: 126 DSD-IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 D + +E ++L WY+ LD I P D+ KDPK+RLQEYLQ R PLP Y VV ++G+A Sbjct: 131 DCGDLTVLEPIVLKWYEPYLDHIEPTDQLKDPKSRLQEYLQARKKPLPVYEVVDIQGDAP 190 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 +Q F + CQ++GL + G G+SRR AEQA A LK LE + Sbjct: 191 NQHFKVECQIAGLP-TMQGEGASRRFAEQAVAADILKLLEHK 231 >UniRef50_A1AWQ6 Ribonuclease III n=3 Tax=Gammaproteobacteria RepID=A1AWQ6_RUTMC Length = 221 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 106/219 (48%), Positives = 143/219 (65%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 + +LQ+K+ Y F LL+ ALTH S +NERLEFLGDSIL +I+ LY RFP +DE Sbjct: 1 MKKLQKKINYQFKDLSLLKLALTHCSMGKNNNERLEFLGDSILGVIISKELYQRFPNIDE 60 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G +SR+R+ LVR TL +L+ EL L LG GELKSGG+RRESI AD +EA+ G V L Sbjct: 61 GKLSRLRSHLVRDQTLTQLSAGLELSNSLILGFGELKSGGYRRESIQADAIEAIFGAVLL 120 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 DS+ +T ++L+ ++ L+ ISP D KDPKT+LQEYLQ LP Y + G+ H+ Sbjct: 121 DSNFETTSTVVLDLFEMLLNNISPDDSLKDPKTQLQEYLQKYGNVLPKYELTDTIGKDHN 180 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 FTI+C + + V + S +KAEQ+ A+ LKKL+ Sbjct: 181 AIFTINCLLKDQNLQVSQSAKSIKKAEQSCAQTLLKKLK 219 >UniRef50_B8FKR2 Ribonuclease III n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKR2_DESAA Length = 535 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 85/225 (37%), Positives = 126/225 (56%), Gaps = 8/225 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 L+ LGY F ELL +A+ H S ++H NERLEFLGD++L+ +++ L ++ Sbjct: 309 LEEALGYNFKTPELLLEAMCHSSYVNEHPDCTWTHNERLEFLGDAVLNLAVSDMLMSKYS 368 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EGD+SR+RA+LV LAE+AR +G+ L LG GE + G+ + SILAD++EA+ G Sbjct: 369 ENREGDLSRLRASLVNEGQLAEIARSLGIGQHLLLGKGEARGRGWDKNSILADSLEAVFG 428 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 G++ DS K+I N + E +D KTRLQEY Q + P+Y +++ G Sbjct: 429 GIYSDSGYADAFKVIKNLIAPLIPEEVAVAAAQDYKTRLQEYAQSKLRITPSYELIREFG 488 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H++ F V+ G G S++ AEQ AA + L L E Sbjct: 489 PDHEKTFVAQATVN-KEFTSQGKGRSKKAAEQDAAREVLILLGQE 532 >UniRef50_B3R1Z9 Ribonuclease 3 n=139 Tax=Bacteria RepID=RNC_CUPTR Length = 256 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 109/206 (52%), Positives = 142/206 (68%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRV 63 + ++ LQ++LGY F+ ELLQQALTHRS S++HNERLEFLGDS+L+ +A+ LY F ++ Sbjct: 1 MNLDALQQRLGYRFSKPELLQQALTHRSHSAQHNERLEFLGDSVLNCAVADMLYGMFGKL 60 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 DEGD+SR+RA LV+ L E+A+ +L + LRLG GELKSGGFRR SILAD +EA++G V Sbjct: 61 DEGDLSRVRANLVKQQALYEIAQMLQLSDTLRLGEGELKSGGFRRPSILADALEAIVGAV 120 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 FLD+ LI Y L+++ P KD KT LQEYLQG + LP Y V+ G A Sbjct: 121 FLDAGFDAARALIRKLYIPILEQVDPRTLGKDAKTLLQEYLQGHKIALPQYNVIATHGAA 180 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRR 209 H Q+F + C V L V GTG+SRR Sbjct: 181 HSQQFEVECTVPKLEVRVFGTGASRR 206 >UniRef50_Q0SMF0 Ribonuclease 3 n=21 Tax=Borrelia RepID=RNC_BORAP Length = 245 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 7/229 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANA 55 ++ L FN+ +LL AL+H S S++ +NERLEFLGDS+L+ +I + Sbjct: 14 RKAQLSEFLENLSIDFNNFDLLNTALSHSSYSNELDQKSDNNERLEFLGDSVLNLIITDH 73 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY +P EG++S+ R+ +V ++L+ +ARE +LG + LG GE + G ++ ILAD Sbjct: 74 LYKTYPNKSEGELSKARSYIVSEDSLSSIAREIDLGSYILLGRGEESNDGRNKKGILADA 133 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EA +G ++LDS + ++ + + + KD K+ LQEY+Q ++ P Y Sbjct: 134 IEAFVGAIYLDSGFLIATEFVVGLFDMYIRLMFNRGDFKDYKSLLQEYVQKKYKISPNYK 193 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + + G HD+ F + V G G G S+++AE AAE ALK +E Sbjct: 194 LDKEIGPDHDKVFCVELYV-GEKFISNGKGKSKKEAEMRAAEVALKAME 241 >UniRef50_Q1Q4S0 Similar to ribonuclease III n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4S0_9BACT Length = 236 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 80/225 (35%), Positives = 129/225 (57%), Gaps = 5/225 (2%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN---ERLEFLGDSILSYVIANALYH 58 NP Q +GY+F LL++ALTH S ++N ERLEFLGD++L +I++ LY Sbjct: 9 NPEKFIACQNIIGYSFKKMLLLEKALTHTSCRVENNFSNERLEFLGDAVLGMIISDYLYK 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P EG+++ +++ +V +TLA++ E L E L +G G L +S+LA+ EA Sbjct: 69 TMPHYSEGELTNVKSVVVSQSTLAKVGMEAGLKEFLLVGRG-LNDRDLFPKSLLANVFEA 127 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LI +++D I+ + L + + +D + +K+ K+ LQ+Y Q + PTY ++Q Sbjct: 128 LIAAIYIDGGIEAASEFTLRYLKKEIDLVCKNQHKKNYKSILQQYSQKEYGITPTYRLLQ 187 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F I + G SE G G S+++AEQ+AA++ALK L Sbjct: 188 QIGPDHGKSFEIVVSIKG-SEYGRGWGKSKKEAEQSAAKEALKIL 231 >UniRef50_B0PD50 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD50_9FIRM Length = 232 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 9/223 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRF 60 + L+ ++GYTF + L ALTH S +++ NER EFLGD++LS V+++ L+H + Sbjct: 11 SALEGRIGYTFQNGRYLDIALTHSSYANEVKKNISSNERQEFLGDAVLSIVVSDYLFHTY 70 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 + EGD++++RA LV +L E ++ LG+ L+LG GE GG R SILAD EALI Sbjct: 71 -HLAEGDLTKLRAALVCEKSLWEFSQALGLGDFLKLGRGEEMMGGRTRPSILADAFEALI 129 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD I+ + +L + L+ D KT LQE +Q +Y++V Sbjct: 130 AAIYLDGGIEPARRFVLGYIVDALENRD-DLAFSDYKTMLQEIIQKNPEERLSYVLVNES 188 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H+++F + +++ + VG G S++ AEQAAA +ALK + Sbjct: 189 GPDHNKKFLVEVRLN-SNVIGVGCGGSKKSAEQAAAREALKLM 230 >UniRef50_B2KC89 Ribonuclease III n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC89_ELUMP Length = 221 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 87/223 (39%), Positives = 138/223 (61%), Gaps = 10/223 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFP 61 N +++ L Y+F ++EL+++ALTH+S + + HNERLEFLGDS+L V A +Y ++P Sbjct: 3 NDIEQVLDYSFKNKELIREALTHKSFTGERRSVKHNERLEFLGDSVLGLVAAEYIYSKYP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 V+EG +S++++ LV + L A E +LG L LG GE +GG RESIL++ +EA++G Sbjct: 63 EVEEGVLSKIKSGLVSRHNLYLWASELDLGAYLALGAGEAATGGRTRESILSNAMEAVLG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+LD ++V+ +I W T S + D K+ LQE +Q ++ +P Y V+Q G Sbjct: 123 AVYLDGGFESVKNIINKWIST----QSLTEVSSDYKSTLQEIVQKKYKSVPEYEVIQTVG 178 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 H++ FT+ S E G G +++ AEQ AA+ AL+ L+ Sbjct: 179 PEHEKIFTVVVS-SLKKELGRGRGKNKKLAEQDAAKNALENLK 220 >UniRef50_B2A2N1 Ribonuclease 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RNC_NATTJ Length = 230 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 90/225 (40%), Positives = 137/225 (60%), Gaps = 9/225 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 I L+ KLG + + LL QA+TH S + + HNERLEFLGD++L I+ LY Sbjct: 7 DIVELKEKLGIYVDDK-LLLQAVTHTSYAHEQKDVVDHNERLEFLGDAVLELAISETLYK 65 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++P + EG+++++RA LV +L ++A + +LG+ LRLG GE +GG R S LADTVEA Sbjct: 66 KYPELPEGELTKLRAELVCELSLVKIAEKLDLGKYLRLGKGEDSTGGRDRRSTLADTVEA 125 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LIG V+L ++ ++LIL+ ++ +L I + D KT +QE +Q R+ P Y +V+ Sbjct: 126 LIGAVYLQTNYDQTKQLILDLFKDQLSHID-NQRIGDYKTMIQELVQDRYGDPPKYQIVK 184 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G HD+ F Q++ G+G S+++AEQ AA A +KL Sbjct: 185 ESGPDHDKSFVAEVQINN-EVVGRGSGKSKKEAEQNAAHFAFQKL 228 >UniRef50_B0VFA5 DsRNA-specific ribonuclease n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFA5_9BACT Length = 255 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 128/227 (56%), Gaps = 10/227 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNE---------RLEFLGDSILSYVIANAL 56 +++LQ+K+ YTF+ LL ALTH+S +H E R+EFLGDSIL ++++ L Sbjct: 28 LSQLQKKIDYTFHDPTLLYAALTHKSYLHRHFEDHKTPSPFERMEFLGDSILGFIVSKEL 87 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + R P EG +S++++ +V L A+ +LG+ L L P E +SGG + SIL+D + Sbjct: 88 FTRHPDEQEGKLSKLKSKIVSETYLTLKAKAIDLGKYLLLSPEEQQSGGASKPSILSDAM 147 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EALI ++LDS I + I N E ++ + K+ LQEY+Q R+ P PTY+ Sbjct: 148 EALICAIYLDSGISAATRFIRNHILNNYQETVTREELVNYKSILQEYMQSRNQPPPTYVT 207 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 V +G H + F + + G G G++++ A Q AA A +KL Sbjct: 208 VAEQGPEHHKTFVVEVR-WGNKLLGTGKGNTKKNAHQEAARMACQKL 253 >UniRef50_C9KQ86 Ribonuclease III n=4 Tax=Clostridiales RepID=C9KQ86_9FIRM Length = 247 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 86/221 (38%), Positives = 125/221 (56%), Gaps = 7/221 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPR 62 L +LG TF+ LL QALTH S +++ HNERLEFLGD++L + LY FP Sbjct: 20 LSERLGVTFHDIALLDQALTHTSYANESKRNTAHNERLEFLGDAVLELASSTYLYEHFPE 79 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EG++++ RA++V TLA+LA LG+ L LG GE GG R++ L D EA+IG Sbjct: 80 MPEGELTKTRASIVCSTTLAKLATGLHLGDYLLLGRGEEMGGGRTRQTNLEDVFEAVIGA 139 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 V+LD + + ++ + + G KD KT LQE + + Y +V G Sbjct: 140 VYLDQGWEAAQAYVVRQLRGEFENAEHGAILKDYKTILQEIVFRKEGQSIAYELVSESGP 199 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H +EFT +V+G GTG S+++AEQ AA +AL+K+ Sbjct: 200 DHAKEFTFRVRVTG-KVMGEGTGHSKKEAEQHAARRALEKI 239 >UniRef50_A0NMB9 Ribonuclease III n=2 Tax=Rhodobacteraceae RepID=A0NMB9_9RHOB Length = 236 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 87/226 (38%), Positives = 127/226 (56%), Gaps = 9/226 (3%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIANAL 56 P I+ L+ L Y F ELL+ ALTH SA + +RLEFLGD +L VIA+ L Sbjct: 8 PGPISALKNALQYEFRDLELLRVALTHASALPPSETVAGSYQRLEFLGDRVLGLVIASML 67 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + FPR DEG+++R +V+ T AE+A+E +G+ +R+G E ++GG ++ ++LAD Sbjct: 68 HKHFPRADEGELARRFNHMVKRETCAEIAQELGVGDAMRIGLAEAQTGGRKKTALLADIC 127 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 E++I ++LD + E I ++ R+ +D KT LQE+ Q + LP P Y V Sbjct: 128 ESVIAAIYLDGGFEAAESFITRLWEPRMLSW--SGPLRDAKTTLQEWAQSKSLPTPRYDV 185 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G H FT+ V GL P G G S+R AEQ AAE L++ Sbjct: 186 TSRDGPDHAPNFTVSVTVQGLP-PGEGKGGSKRIAEQNAAEAVLRR 230 >UniRef50_Q6MLR5 Ribonuclease 3 n=1 Tax=Bdellovibrio bacteriovorus RepID=RNC_BDEBA Length = 234 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 79/222 (35%), Positives = 127/222 (57%), Gaps = 8/222 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRF 60 L+ ++G+ F + LL++ALTH+S +++ HNE+LEFLGD++L V+ LY +F Sbjct: 7 KSLEERVGHQFKNPALLERALTHKSFANELRNTVEHNEKLEFLGDAVLDLVVGEFLYEKF 66 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG +S+ RA++V L+ELA E L + ++LG GE +GG ++ ++A + EA++ Sbjct: 67 PTDTEGGLSKKRASIVNEEVLSELALEMGLNKLMQLGKGEALTGGAQKPRLIASSFEAIV 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEIS-PGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 G ++LD + I + D + D ++D KTRLQE +Q P Y V+ Sbjct: 127 GALYLDGGFEVARSFIRQEFVPLADRVCGHEDFERDYKTRLQELVQKSSKETPRYEVLAE 186 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 G HD+EF + +V G G S++ AEQ AA+ AL+ Sbjct: 187 EGPPHDREFLVCVKVK-EDVWAQGRGRSKKNAEQMAAKNALE 227 >UniRef50_B0S1M6 Ribonuclease III n=2 Tax=Finegoldia magna RepID=B0S1M6_FINM2 Length = 238 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 82/228 (35%), Positives = 127/228 (55%), Gaps = 9/228 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 ++ L+ KL Y F LL A H S +++ NERLEFLGDS+L V+++ LY+ Sbjct: 9 LHELEEKLDYRFTDINLLNLAFFHSSYGNENKAYKNISNERLEFLGDSVLDLVVSDFLYN 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 + EG M+++R+ +V + + +A+ ELG+ L +G GE SGG + S+LADT EA Sbjct: 69 SKSSLKEGAMTKIRSQMVCEKSFSNMAKYLELGKYLMMGHGEFISGGSEKPSVLADTFEA 128 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 + G ++LDS ++ K++ N +++ + EI D KT LQE Q + Y +V Sbjct: 129 VFGAIYLDSGYESAFKIVENKFKSLFIAEIETKSSFIDYKTMLQENNQKKSRDKLKYKIV 188 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 + G HD++F + G G GSS++ AEQ AA AL KL + Sbjct: 189 KEEGPDHDKKFYVDVY-EGNLVIGSGFGSSKKHAEQDAARNALIKLRV 235 >UniRef50_Q72C44 Ribonuclease 3 n=9 Tax=Desulfovibrionaceae RepID=RNC_DESVH Length = 253 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 82/226 (36%), Positives = 126/226 (55%), Gaps = 7/226 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 ++ LQ+ +G+ F ELL A+TH S +++ HNERLEFLGD++L ++ L+ Sbjct: 28 PVDELQKTIGHRFGDMELLLTAMTHSSWANEQAVPVEHNERLEFLGDAVLELCVSEELFR 87 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP EGD++RMR+ LV +L +ARE L LRLG GE GG R S+L+D +EA Sbjct: 88 RFPSAREGDLTRMRSRLVSKPSLEGVARELRLDMSLRLGKGEESQGGRERGSLLSDALEA 147 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G VFLD+ + +++ E + KD K++LQE Q P Y ++ Sbjct: 148 MLGAVFLDAGYIAAKGVVMRILGPHFPEALVPVRTKDYKSQLQELTQKLFRDRPVYTLLG 207 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G HD++F + + + TG S ++AEQ AA +A+ L+ Sbjct: 208 SSGPEHDKQFDVRVVLPDGT-VFEATGPSMKRAEQMAAARAVATLD 252 >UniRef50_D2QZC7 Ribonuclease III n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZC7_9PLAN Length = 273 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 77/229 (33%), Positives = 124/229 (54%), Gaps = 5/229 (2%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALY 57 ++ + R +R+LGY FN + LL+ ALTH S + NERLEFLGD+IL + LY Sbjct: 40 VDESGLARCERRLGYVFNSKPLLRSALTHASGAEHRLASNERLEFLGDAILGVYVCEMLY 99 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +FP EGD++++++ +V T A+++ L E L LG G + S S+LAD E Sbjct: 100 RQFPDYLEGDLTKVKSVVVSRQTCAKVSEALGLQEFLILGKG-MSSSPNVPPSLLADVFE 158 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 +LI ++LD Q + I N+ ++ + G+ + K+ LQ++ Q PTY ++ Sbjct: 159 SLIAAIYLDGGEQAARQFINNYIGPEVELAAAGELGGNYKSLLQQFAQRECGNTPTYHLL 218 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 +G H + F I V G G ++++AEQ AA AL +++ E Sbjct: 219 DEKGPDHSKCFKISASVGGKKYQA-AWGRNKKEAEQRAANNALAEIKGE 266 >UniRef50_D1ATS9 Ribonuclease 3 n=1 Tax=Anaplasma centrale str. Israel RepID=D1ATS9_ANACI Length = 249 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 80/219 (36%), Positives = 123/219 (56%), Gaps = 5/219 (2%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPRVD 64 R+ GY F +LL ++LTH S S + + ERLEFLGD++LS ++ LY FP D Sbjct: 16 RVYEVTGYRFRDLDLLLESLTHPSLSRESAANYERLEFLGDAVLSMAVSEMLYRLFPDDD 75 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG +++ R LVRG+ + E+AR LG + + GE+ GG L + +EALIG ++ Sbjct: 76 EGCLTQKRTALVRGSEVVEIARSIGLGGLILMSSGEMSCGGSDNPGTLENALEALIGAMY 135 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 +D + + I + +R +S +DPKT LQE++Q R +P Y +V G H Sbjct: 136 IDGSSEDYKNFIREHWFSRAQRMSSAP-PQDPKTALQEWVQSRGWTVPLYKLVSKSGPEH 194 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 F + + G ++GTGSS++ AEQ AA+ LK++ Sbjct: 195 KPVFAVEVSIQGHG-SILGTGSSKKLAEQEAAKLMLKRI 232 >UniRef50_A6GP51 Ribonuclease III n=1 Tax=Limnobacter sp. MED105 RepID=A6GP51_9BURK Length = 226 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 128/213 (60%), Gaps = 1/213 (0%) Query: 15 YTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 Y+F Q LL+ ALTHRS SS HNERLEFLGDS+L+ + L+ P +DEG MSR+R+ Sbjct: 3 YSFKDQALLRLALTHRSYSSHHNERLEFLGDSVLNCAASILLFETHPDMDEGKMSRVRSH 62 Query: 75 LVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEK 134 LV+ + LA + R L + L LG GEL+S ++SI+AD +EAL G + LDS + Sbjct: 63 LVKQDCLAMVGRNLLLDQYLFLGAGELRSAKTIKDSIVADALEALFGAILLDSGFEAARD 122 Query: 135 LILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQV 194 ++ + + E KDPKTRLQE LQG+ + LP Y V+ G + EF++ C V Sbjct: 123 CVVRLLKPVMLETPIESMGKDPKTRLQELLQGKRMKLPMYRVLVEGGTSASPEFSVECAV 182 Query: 195 SGLSEPVVGTGSSRRKAEQAAAEQAL-KKLELE 226 L VG G SRR AEQ AA+ L + LE E Sbjct: 183 EDLEITKVGQGHSRRVAEQHAAQAVLIELLERE 215 >UniRef50_C6V631 Ribonuclease III n=2 Tax=Neorickettsia RepID=C6V631_NEORI Length = 222 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 123/224 (54%), Gaps = 5/224 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASS-KHNERLEFLGDSILSYVIANALYHRFPR 62 + + LQ LG F ++ELL +ALTH S ERLEFLGD++L+ V+A+ LY FP Sbjct: 1 MELEELQSLLGVHFKNKELLVEALTHPSVEKCPSYERLEFLGDAVLNLVVASMLYDLFPG 60 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG +S+ ++ LV LA LAR+ LG+C+RL E SGG + + L + +EALIG Sbjct: 61 DPEGRLSQRQSVLVCKTALAMLARQMNLGDCIRLSSSEEASGGRDKTNNLENVLEALIGA 120 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +FLD+ +TV I + + + +PK+ LQE LQ + + P Y V+ G Sbjct: 121 IFLDAGFETVTCFIQKHWYELAVQ--SDSIEPNPKSALQELLQAKGMKPPVYNVIDRSGP 178 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 AH F + V G TG S++ E+ AA L++L+ E Sbjct: 179 AHLPIFEVEICVDGKKR--RATGRSKKLGEENAARMMLEELKAE 220 >UniRef50_C7NB47 Ribonuclease III n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NB47_LEPBD Length = 232 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 79/225 (35%), Positives = 142/225 (63%), Gaps = 8/225 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHR 59 L +K+GY F +++ L++ALTHRS S++ +NE+LEFLGD+IL+ + +Y Sbjct: 8 KDLIKKIGYEFKNKKYLEEALTHRSYSNEAEKTRRFNNEKLEFLGDAILNLITTEYIYDL 67 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 + + EG+++++++ ++ + +A + +LGE L L GE+ SGG R SIL D EAL Sbjct: 68 YGKKTEGELAKLKSQIISEPVFSTIASDIKLGEYLYLSNGEIMSGGRNRRSILGDAFEAL 127 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG +F DSD T + + L + +++++ + D KT LQE++QG++ +P Y +++ Sbjct: 128 IGAIFKDSDYYTAKNVALKFLLGKINKLEEIEGTGDYKTILQEFVQGKYKKMPEYKLLRT 187 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 +G H++ F I + + +GTG S+++AE+ AA++AL+KL+ Sbjct: 188 KGPDHNKVFEICVRWND-KIYGIGTGKSKKEAEKHAAKEALEKLK 231 >UniRef50_C8PI53 Ribonuclease III n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PI53_9PROT Length = 303 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 129/221 (58%), Gaps = 3/221 (1%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRV 63 + +LQ KLGY F +Q L+ ALTH+SA + HN ERLEFLGD+++ ++ L+ +F Sbjct: 3 NLEKLQEKLGYKFKNQTHLKIALTHKSAKNGHNNERLEFLGDAVMDLIVGEYLFKKF-SS 61 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 DEGD+S++RA LV ++ ++ A+ +GE L + E ++GG + S+L+D EA++G V Sbjct: 62 DEGDLSKLRAALVNESSFSKFAKFLGIGENLNMSLSEERNGGREKPSLLSDAFEAIMGAV 121 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 +L+S +Q ++ + + IS + +D KT LQE Q + P Y+++ G Sbjct: 122 YLESGLQNTARIAIAILEILYPRISFNELVRDYKTALQELTQAKFGVTPEYILLGSSGPD 181 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 H + F + V G G+S+++AEQ A+ A+ L+ Sbjct: 182 HKKSFEMAALVGG-KWLSSAVGASKKEAEQKCAQIAIDLLQ 221 >UniRef50_Q39T82 Ribonuclease 3 n=5 Tax=Geobacter RepID=RNC_GEOMG Length = 246 Score = 240 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 92/228 (40%), Positives = 132/228 (57%), Gaps = 9/228 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANALYH 58 L+ +GY F +++ L +ALTHRS ++ NERLEFLGD++L ++ L+ Sbjct: 17 TELEAGIGYRFVNRQFLAEALTHRSWVNERRGEEGIRDNERLEFLGDAVLGLLVGKMLFA 76 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP+ EG ++RM+A+LV TLA LA LG L LG GE +SGG R S+LA+T EA Sbjct: 77 RFPQSREGVLARMKASLVGEETLAALASARGLGRHLLLGRGEERSGGRERRSLLANTYEA 136 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+ V+LD + VE+++ + L I+ G +D KT QE +Q R PTY ++ Sbjct: 137 LLAAVYLDGGLGPVERIVEQDFSPLLAGIASGATGRDFKTEFQEMVQTRFGTAPTYELIA 196 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD+ FT+ V+G G G S+++AEQAAA Q L + E Sbjct: 197 TDGPPHDRRFTVIAMVAG-KRMGEGAGRSKKEAEQAAARQVLARFAAE 243 >UniRef50_D1ALH0 Ribonuclease III n=7 Tax=Fusobacteriaceae RepID=D1ALH0_SEBTE Length = 231 Score = 240 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 135/227 (59%), Gaps = 8/227 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 M+ + L K+GY F+ +LL++AL HRS +++H NERLEFLGD++L + Sbjct: 1 MDDSKLRELMEKIGYEFDDIKLLKEALIHRSYANEHGEIENINNERLEFLGDAVLDLIST 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 +Y + +EGD++++++ ++ + +++E LGE L L GE +GG R+SIL Sbjct: 61 EYIYTKEKDDNEGDLAKLKSRIISEPIFSAVSKEIALGEYLFLSNGEEITGGRDRKSILG 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EALIG +F+DS +++ L + + ++D I ++ KD KT LQE Q + +P Sbjct: 121 DAFEALIGAIFMDSGFDEAKRIALKYLKDKIDNIDDLEELKDYKTLLQELFQSKFHIIPN 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 Y ++ +G H+++F I ++ +GTG+S+++AE+ AA +A Sbjct: 181 YEILSEKGPDHNKKFEIAVKLK-EEIVGIGTGTSKKEAEKNAAREAY 226 >UniRef50_C0QLB1 Two domain fusion protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLB1_DESAH Length = 520 Score = 240 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 79/226 (34%), Positives = 130/226 (57%), Gaps = 9/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYH 58 + L++ LG+TF ++ELL+ AL H S ++ N+RLEF+GD++L I L Sbjct: 293 LEILEKNLGHTFANRELLENALRHSSYVNELQANQVPDNQRLEFMGDAVLGLTIGQILME 352 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P ++EG +S+ RA LV LA +AR+ +LG +RLG GE S G + SILAD EA Sbjct: 353 EHPGMNEGSLSKARAALVSEPALASMARQIDLGRFIRLGKGERLSRGSEKNSILADAFEA 412 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++ ++LD + L+ + +++ I+ + +D K+ LQE++Q + P Y + + Sbjct: 413 VMAAIYLDCGFKQTCALVKEQFISQIKLINSAPEIEDFKSMLQEFVQEKGNTPPCYTIHR 472 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G HD+ F+I + + +G+G S++ AEQ AA+ ALK L+ Sbjct: 473 EFGPDHDKTFSICVKACDI--ESMGSGKSKKAAEQHAAQNALKSLK 516 >UniRef50_B3T0T1 Putative RNase3 domain protein n=2 Tax=prokaryotic environmental samples RepID=B3T0T1_9ZZZZ Length = 224 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 94/217 (43%), Positives = 135/217 (62%), Gaps = 1/217 (0%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 +++ Y F LLQ ALTHRS S +NERLEFLGD+ L VI+ LY + EG +S Sbjct: 9 EQRFHYRFKDDILLQTALTHRSHSVDNNERLEFLGDAALDLVISELLYQSYSEQTEGYLS 68 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 RMR++LV+GNTLAELA+E ++G L LG GE SGG R S+L+DT+EA+IG +FLD Sbjct: 69 RMRSSLVKGNTLAELAKELDVGGYLILGKGENTSGGRERLSLLSDTLEAMIGAIFLDGGY 128 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 V+ +I+ + +R+ + P + KD K+ LQE LQG LP Y +V+ G H++ F Sbjct: 129 VAVKNVIIKIFDSRIQALDPKSEHKDHKSVLQEKLQGVKQGLPVYSLVRSVG-DHNKTFV 187 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + C + +G + R AEQ AA +AL+ ++ + Sbjct: 188 VECSIKSGEIVTQASGKTLRVAEQKAASKALQAMQND 224 >UniRef50_B4RCU4 Ribonuclease 3 n=6 Tax=Caulobacteraceae RepID=RNC_PHEZH Length = 238 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 88/225 (39%), Positives = 126/225 (56%), Gaps = 7/225 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASS-----KHNERLEFLGDSILSYVIANALYHR 59 + L+R++GY F ++LL++ALTH S +HNERLEFLGD +L+ A L Sbjct: 7 AVAELERRIGYVFTDRDLLERALTHASVGDGARAVRHNERLEFLGDRVLNLCAAERLMAL 66 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 P EG+MSR+ A+LV + A A+ L E LRL K G + +++L D EAL Sbjct: 67 DPDAREGEMSRLLASLVNYHACARAAKRAGLQEALRLSASATKVGARKSDAVLGDACEAL 126 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 I +++D ++T L ++ + + KDPKT+LQE++QG LPLPTY +V Sbjct: 127 IAALYIDGGLETARAFFLKFWDEEFARLDE-PRAKDPKTQLQEWVQGMGLPLPTYEIVSQ 185 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H FT+ QV+G G G SR+ AE+AAA+ L K E Sbjct: 186 EGPPHAPSFTVEVQVAGFGAE-RGEGRSRQAAEKAAAQCMLLKRE 229 >UniRef50_C9L8J0 Ribonuclease III n=4 Tax=Clostridiales RepID=C9L8J0_RUMHA Length = 263 Score = 239 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 131/226 (57%), Gaps = 11/226 (4%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRF 60 L++K+GY F + +LL ALTH S +++H NERLEFLGD++L + L++++ Sbjct: 36 ELEKKIGYEFENFDLLVNALTHSSYANEHHIAYKENNERLEFLGDAVLELTSSEFLFYQY 95 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 + EG +++ RA++V TLA A+E LG+ L LG GE +GG R SI++D +EALI Sbjct: 96 ADLPEGKLTKKRASIVCEPTLALCAKEISLGDYLLLGKGEEATGGRNRNSIISDAMEALI 155 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD ++ + + L++I D KT LQE +Q ++ Y++V+ Sbjct: 156 GAIYLDGGFANAKEFVHKYI---LNDIENKQLFYDSKTTLQEIVQAQYEDDVKYVLVKEE 212 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G H++ F + + G + G G +++ AEQ AA A+KKL E Sbjct: 213 GPDHNKSFYVEALL-GDKKLGEGCGHTKKAAEQQAAYCAIKKLRDE 257 >UniRef50_A8SMU0 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMU0_9FIRM Length = 237 Score = 239 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 87/228 (38%), Positives = 126/228 (55%), Gaps = 8/228 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANA 55 ++N L LGY F ELL A HRS ++ NERLEFLGD IL ++++ Sbjct: 6 RKELLNELMEVLGYKFKDLELLNLAFVHRSYLNECKDATISNERLEFLGDVILGFIVSVE 65 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY +FP DEG ++++R+ +V + + AR F LG+ L LG GE GG R SILADT Sbjct: 66 LYEQFPNSDEGYLTKIRSKVVCEESFSYAARTFNLGKYLLLGKGEDSFGGRNRNSILADT 125 Query: 116 VEALIGGVFLDSDIQTVEKLILNW-YQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 EAL G ++LD + V ++ + + T + +I KD K+ LQEY +Y Sbjct: 126 FEALFGALYLDGGMDVVTEIANKYFFDTVVYKIDKNIFIKDYKSYLQEYFHKNATTKISY 185 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +V RG HD+EF + + + + GTG ++++AEQ AA AL K Sbjct: 186 TLVAERGPDHDKEFDMCVNIDDVVK-GYGTGKNKKQAEQQAARDALIK 232 >UniRef50_B9E1G8 Ribonuclease 3 n=35 Tax=Clostridium RepID=RNC_CLOK1 Length = 244 Score = 238 bits (609), Expect = 8e-62, Method: Composition-based stats. Identities = 72/226 (31%), Positives = 133/226 (58%), Gaps = 6/226 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS-----KHNERLEFLGDSILSYVIANALYHRF 60 +++ L +FN +EL+ ALTH S ++ K NER+EFLGDS+L I+ L+ + Sbjct: 7 FEEVEKTLNISFNDKELIDTALTHSSYANGKKGVKFNERMEFLGDSVLQLCISEYLFLIY 66 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 EG++++ R+ +V N+L E+A+++ +G+ +++ GE +GG R SILA+ VEA+I Sbjct: 67 KSKSEGELTKKRSLIVCENSLYEVAKKWNIGKYIKMSKGEEITGGRERTSILANCVEAII 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 +++DS + ++ I++ ++ +++ D KT LQE +Q Y++++ Sbjct: 127 AAIYIDSGYKKTKQFIIDNFKDIIEKAIKNQIVLDYKTNLQEIVQQDGDIHIEYMLIKYE 186 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G H ++F V+ + G G +++++EQ AA+ ALKKL+ E Sbjct: 187 GPPHRRKFYTKVCVAN-NVMGSGVGYTKKESEQNAAQDALKKLKSE 231 >UniRef50_D0GJ73 Ribonuclease III n=2 Tax=Leptotrichia RepID=D0GJ73_9FUSO Length = 238 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 136/233 (58%), Gaps = 8/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 M + L K+ Y F ++ L++ALTHRS S++H NE+LEFLGD++L+ + Sbjct: 1 MKIKNVEELMEKIDYKFRNESYLKEALTHRSFSNEHEKSKNFDNEKLEFLGDAVLNLITT 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 +Y+ +EG+++++++ ++ + +A E LG+ L L GE SGG +R+SIL Sbjct: 61 EYIYNSGKGKNEGELAKLKSQIISEPVFSAIAAEIGLGDYLYLSNGEESSGGRKRKSILG 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EALIG VFLDSD T + L + +++ + + D KT LQE Q ++ +P Sbjct: 121 DAFEALIGAVFLDSDYYTAKNTALKFLPDKINNLEDIEGIIDYKTVLQEVFQSKYKKMPE 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y ++ +G H++ F I +++ +G G S+++AE+ AA++A++ +E + Sbjct: 181 YEILDTKGPDHNKVFEISVKLNN-KIIGIGRGKSKKEAEKRAAKEAIEFIENK 232 >UniRef50_A4VIX5 Ribonuclease III n=2 Tax=Proteobacteria RepID=A4VIX5_PSEU5 Length = 208 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 104/190 (54%), Positives = 137/190 (72%) Query: 24 QQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAE 83 ALTHRS + ++NERLEFLGD+IL++V AL++ FP+ EG +SR+RA LV+G TLA Sbjct: 2 LLALTHRSYAGRNNERLEFLGDAILNFVAGEALFNHFPQAREGQLSRLRARLVKGETLAV 61 Query: 84 LAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTR 143 LAR FELG+ LRLG GELKSGG+RRESILADT+EALIG ++LD+ + + ++ W Sbjct: 62 LARGFELGDHLRLGSGELKSGGYRRESILADTLEALIGAIYLDAGMDVARERVIAWLANE 121 Query: 144 LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVG 203 L ++ D KDPKTRLQE+LQ R LP Y VV ++GE H + F + CQV+ L++ G Sbjct: 122 LQGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQGEPHCRTFFVECQVALLNDKTHG 181 Query: 204 TGSSRRKAEQ 213 G+SRR AEQ Sbjct: 182 QGASRRIAEQ 191 >UniRef50_B3DV16 Ribonuclease III n=2 Tax=Verrucomicrobia RepID=B3DV16_METI4 Length = 247 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 76/229 (33%), Positives = 124/229 (54%), Gaps = 12/229 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANALYH 58 + L++K+GY F + +LL++ALTH S + +RLEFLGD++L + L+ Sbjct: 3 LEELEKKMGYAFKNPQLLEEALTHPSFFVESIRVNKGDFQRLEFLGDAVLGLAVTEKLFQ 62 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 FP DEG ++++RA LV L LA E+G+ LRLG GE K+ G + S LA+ +E+ Sbjct: 63 LFPSFDEGKLTKLRARLVSRKNLCSLASLLEIGKYLRLGKGEEKNQGRTKPSNLANALES 122 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRL----DEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 +IG ++LD + I + + + ++ K LQE+LQ + LP Y Sbjct: 123 VIGALYLDGGWDRAKSFIFELFNPLFMELEKDPMRFVEHENSKGLLQEFLQKKGTELPIY 182 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 +V GEAH++ + + G+G S+++AE AA++A +KL Sbjct: 183 RIVLESGEAHNKWYEVEVSWKN-QVLGKGSGKSKKEAELRAAKEAFEKL 230 >UniRef50_UPI00016BFC87 Ribonuclease III n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC87 Length = 239 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 8/224 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANAL 56 +V+ ++K+ YTF ELL ALTH S +++H NERLEFLGD+IL +++ L Sbjct: 9 VVLESFEKKIEYTFKRIELLDLALTHSSYANEHREQGVKDNERLEFLGDAILDLIVSEYL 68 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + ++P EGD+S+ RA++V +LA+ + ELG+ + LG GE GG RESI+AD Sbjct: 69 FKKYPESQEGDLSKFRASIVCEASLAKAGKRLELGKYILLGHGEEMGGGRDRESIIADAF 128 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+ G + +DS + V+ + + S KD KT LQ Q + Y V Sbjct: 129 EAVTGAMLIDSSYEDVKTYLAKTLIEFIKHTSATKLYKDYKTILQIESQKNVNTVIAYEV 188 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 V+ +G H++EF + + +G G+G ++R AEQ AA QAL Sbjct: 189 VEEKGPDHEKEFVVELKQNG-KVIGKGSGRTKRDAEQVAAHQAL 231 >UniRef50_A6DSV3 Ribonuclease III n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSV3_9BACT Length = 232 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 122/229 (53%), Gaps = 7/229 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALY 57 I L+ L FN LL++ALTHRS + N+RLEFLGD+++ +++ L+ Sbjct: 3 ISFKVLEDNLKCKFNQPTLLREALTHRSYKFESKEPLNDNQRLEFLGDAVIELIVSRYLF 62 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 R+P EGD+++ RA LV+ + L E A+ +LG+ L LG ELKS G R S L+D E Sbjct: 63 DRYPDAPEGDLTKYRAALVKESALFECAKSIKLGKYLLLGKSELKSQGNERPSNLSDAYE 122 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 AL+ ++LD +T + +N + DE + ++PK LQE Q H P Y+ + Sbjct: 123 ALMAAIYLDQGYETAQSFHINILEKLWDEPADLLLVQNPKGTLQELTQKNHGSPPKYITI 182 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD + + C + G G + + A++ AA +A+ L+ E Sbjct: 183 SKTGPEHDPLYKVEC-ILNKELISKGQGKTLKAAQENAARKAIHCLKEE 230 >UniRef50_Q4FUV6 Ribonuclease 3 n=11 Tax=Gammaproteobacteria RepID=RNC_PSYA2 Length = 265 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 105/221 (47%), Positives = 143/221 (64%), Gaps = 3/221 (1%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA-SSKHNERLEFLGDSILSYVIANALYHRFPRVD 64 + L RKLGY FN L + ALTHRS S K+ ERLEFLGD++L ++ ALYHR+P + Sbjct: 34 LAVLTRKLGYVFNDLSLAKLALTHRSFDSKKNYERLEFLGDALLGMIVGEALYHRYPTQN 93 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG ++RMRATLVR +L +A+ EL L LG GE K GG R SILAD VE+LIG ++ Sbjct: 94 EGRLTRMRATLVRQESLVIIAQNLELSNQLILGVGERKGGGRNRASILADAVESLIGAIY 153 Query: 125 LDS-DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 LDS D+ + +L+WY +D ++ KD K+RLQE+LQ + LP Y +++ RG A Sbjct: 154 LDSQDMNITRECVLSWYGDLIDNVNDQKALKDAKSRLQEWLQSKQFDLPHYELMETRGNA 213 Query: 184 HDQEFTIHCQVSGLSEP-VVGTGSSRRKAEQAAAEQALKKL 223 Q F + CQV+ ++ P + +G SRR AEQ AAE + +L Sbjct: 214 PHQLFVVRCQVNIINCPDITESGESRRIAEQKAAELMINQL 254 >UniRef50_A8ZZF3 Ribonuclease III n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZZF3_DESOH Length = 231 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 83/225 (36%), Positives = 128/225 (56%), Gaps = 9/225 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFP 61 L++ L Y F LL +AL H S ++ NERLEFLGD+ LS I + L RFP Sbjct: 6 LEQHLVYRFTDTGLLAKALRHSSYVNEQADPAMEDNERLEFLGDAALSLCIGHLLMARFP 65 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EGD+S+ RA LV LA++ R LGE + LG GE ++ G ++SILA+ VEAL+G Sbjct: 66 ELSEGDLSQTRAGLVNAGWLADIGRSMNLGEYVLLGKGEEQTNGRNKDSILANAVEALLG 125 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD V ++ + ++ ++ ++ D ++ K+ LQE Q PTY ++ G Sbjct: 126 AIYLDGGFDAVMAVVRHKFENDIEALAALDMNRNYKSLLQELTQATDGKAPTYEIIDETG 185 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 HD+ F HC+VS G+G +++ A+Q AA +AL ++ E Sbjct: 186 PDHDKTF--HCRVSAGDIQAEGSGKNKKTAQQDAAHKALALIKGE 228 >UniRef50_Q6ANV0 Ribonuclease 3 n=2 Tax=Desulfobulbaceae RepID=RNC_DESPS Length = 241 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 122/224 (54%), Gaps = 7/224 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRF 60 ++K+ Y F LLQ+AL H S + + +NERLEF+GD++L V+ NALY RF Sbjct: 17 AEFEKKINYKFIDLRLLQKALIHSSYAFEQAQAGKNNERLEFVGDAVLDLVVGNALYRRF 76 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P + EG+++R+RA LV LA +AR+ LG L LG GE S G + SIL+ EA+I Sbjct: 77 PEMREGELTRLRAALVNEGHLATMARKINLGYFLCLGKGEDNSKGREKSSILSCAYEAVI 136 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G +F D V L+ ++ +D D K+RLQE LQ +H P+Y + Sbjct: 137 GAIFQDGGYDAVAALVERFFLPVIDRRKEDLLLADAKSRLQEILQEKHNEGPSYRLDNEE 196 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G +H + FTI G S+++AEQ A A+KK+E Sbjct: 197 GPSHKKRFTISVLFRD-EVLGTGEAGSKKEAEQRGAALAIKKIE 239 >UniRef50_B1C8X8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8X8_9FIRM Length = 227 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 85/227 (37%), Positives = 139/227 (61%), Gaps = 6/227 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYH 58 + I RL++KLGY F +EL++ ALTH S S+++ NERLEFLGD++L + LY Sbjct: 1 MEIERLEQKLGYEFKDKELIKVALTHSSKSNENKTLQNNERLEFLGDAVLDLCVGAYLYK 60 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P EG ++++RA +V ++L + + +LGE + LG GE+ SGG +++I+AD EA Sbjct: 61 TLPGKKEGVLTKLRALIVCADSLFSASDKLDLGEFIMLGKGEMHSGGKYKKNIIADCFEA 120 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G ++LDSD + V + L + + G+ D KT LQEY+ +++ +Y +VQ Sbjct: 121 VLGAIYLDSDYEKVSTIALTLLSDVIKKAISGNLTYDYKTLLQEYIHSKNIKDFSYELVQ 180 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 ++G HDQ FT ++ + G G +++++EQ AA LKKL+L Sbjct: 181 IKGPEHDQIFTSKVIINN-KDMGQGEGKNKKESEQHAALNTLKKLKL 226 >UniRef50_A0LGM1 Ribonuclease 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=RNC_SYNFM Length = 242 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 88/238 (36%), Positives = 133/238 (55%), Gaps = 13/238 (5%) Query: 1 MNPIV-INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVI 52 M P + LQ LGY F + LL +AL HRS ++ NE LEFLGD++L I Sbjct: 1 MKPSDGLEALQNLLGYRFGDEGLLHRALVHRSYLHENPHLDEKDNETLEFLGDAVLGLAI 60 Query: 53 ANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESIL 112 ++ L +FP +EG++SR+R+ +V L +A E LGE L LG GE +GG R+ S+L Sbjct: 61 SHFLLEQFPDYNEGELSRLRSAIVNERELTRIAVELNLGEYLLLGKGEEMTGGRRKASLL 120 Query: 113 ADTVEALIGGVFLDSDIQTVEKLILNWYQTRL----DEISPGDKQKDPKTRLQEYLQGRH 168 AD++EAL+ ++LD + V +I + L E KD KT+LQE Q R+ Sbjct: 121 ADSLEALLASIYLDGGLDAVLGVIKKLFDVYLRFEKREHVLKALDKDYKTQLQELTQARY 180 Query: 169 LPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 P Y++ + G HD+ F ++ + G G+G S++ A+QAAAE+AL+ + + Sbjct: 181 KLTPVYVLDREEGPDHDKTFHMNVVLEGQVLAG-GSGKSKKDAQQAAAEKALQIIAAD 237 >UniRef50_B9M911 Ribonuclease III n=1 Tax=Geobacter sp. FRC-32 RepID=B9M911_GEOSF Length = 238 Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 130/226 (57%), Gaps = 8/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 I L++ + Y F + LL +ALTH S ++ N+RLEFLGD+++ V+++ L+ Sbjct: 9 IAALEKLINYDFTDKSLLVEALTHPSFVNESGGKVRQDNQRLEFLGDAVVGLVLSHDLFS 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP EG+++++RA+LV +LA LAR +LG L+LG GE +SGG + S+LAD EA Sbjct: 69 RFPDSREGELTKLRASLVDEASLAILARAIDLGAHLKLGRGEERSGGRTKPSLLADAYEA 128 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+ V+LD I+ +I + + + +++ + +D KT QE P YL+ Sbjct: 129 LLAAVYLDGGIEPAAAIIKSHFASFMEKRNIRTSGRDFKTEFQELAHRLRSLAPRYLLQG 188 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 V G H + F++ + G G S+++AEQAAAEQ + L+ Sbjct: 189 VSGPDHQRIFSVAVFI-GEEFMGEGLAKSKKEAEQAAAEQGIAFLK 233 >UniRef50_A8TKF3 SsrA-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKF3_9PROT Length = 227 Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 89/222 (40%), Positives = 131/222 (59%), Gaps = 6/222 (2%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSA---SSKHNERLEFLGDSILSYVIANALYHRFP 61 ++ L LG+TFNH ++L++A+TH SA + ERLEFLGD +L+ +A L RFP Sbjct: 7 DLSHLAEVLGHTFNHPDILRRAVTHASAEPRAWNAYERLEFLGDRVLALAVAEQLLDRFP 66 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG +++ +LVR TLA++A +LG L + GE +G ++IL+D++EA+I Sbjct: 67 HEREGAIAKRHVSLVRRETLADVAHTIDLGRYLIVSRGEDDAGARASDTILSDSMEAVIA 126 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD + +K IL + L+ +DPKT LQE+ QGR LPLP Y V+ G Sbjct: 127 ALYLDGGLAAAQKFILKHWNPLLE--MDHRPPQDPKTGLQEWAQGRRLPLPVYTTVEQTG 184 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 AH EFT+ V GL+ P +G S+R AEQ AA L+ + Sbjct: 185 PAHAPEFTVEVVVEGLA-PQRASGKSKRLAEQLAAAAMLEAI 225 >UniRef50_B0TGW4 Ribonuclease 3 n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=RNC_HELMI Length = 235 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 82/226 (36%), Positives = 120/226 (53%), Gaps = 9/226 (3%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANA 55 P L R++G L+ ALTH S +HN+RLEFLGD++L VI Sbjct: 5 PNHPAELARRIGIASEDLATLEMALTHPSFVYENPQAPPEHNQRLEFLGDAVLGLVIGEQ 64 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ R+P EG++SR RA +V LA+ AR +LG L+LG GE SGG + SILAD Sbjct: 65 LFVRYPTWTEGELSRRRAAVVCEANLADGARRLQLGAWLKLGRGEEASGGREKPSILADA 124 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EA+IG +FL I+ + I++ + L + D KT QE++Q Y Sbjct: 125 LEAVIGAIFLSGGIEAARRFIVDLFGDALAN-AQNLVSGDNKTAFQEWVQRTGPADIRYC 183 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 +V G HD+ F V+G + G G ++++AEQ AA +A++ Sbjct: 184 IVDESGPDHDKRFVAAVMVNG-TVIADGQGRTKKEAEQQAAGRAMR 228 >UniRef50_C9LMI7 Ribonuclease III n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMI7_9FIRM Length = 249 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 8/213 (3%) Query: 18 NHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 ++ ELL ALTH S +++H NERLEFLGD++L + + L+ RFP EGD++R Sbjct: 27 HNMELLNVALTHTSYANEHRNLKVHDNERLEFLGDAVLDLAVGDYLFRRFPEWPEGDLTR 86 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 +A++V AE A F +G+ + LG GE SGG R SIL + E++IG V+LD+ + Sbjct: 87 AKASVVCKPACAECAANFHVGDYMLLGRGEEMSGGRTRVSILGNAFESVIGAVYLDNGYE 146 Query: 131 TVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 K IL Q LD + G D K+ LQE Q Y VV+ G HD+ + Sbjct: 147 VAAKFILGHMQKFLDLVDQGIYDHDYKSDLQEIAQKNGDVDIRYEVVRDEGPDHDKTIWM 206 Query: 191 HCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 ++G + G G ++++A Q AA++A+++L Sbjct: 207 ELFINGKA-LGTGIGKNKKEAAQNAAKEAIERL 238 >UniRef50_Q0AYW0 Ribonuclease 3 n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RNC_SYNWW Length = 233 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 82/225 (36%), Positives = 132/225 (58%), Gaps = 15/225 (6%) Query: 10 QRKLGYTF--------NHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANAL 56 +R++ F + EL+ ALTH S + + +N+RLEFLGD++L+ V+A L Sbjct: 4 ERRIAQRFLEDKQLPYSSNELITMALTHPSYAQEKNTVANNQRLEFLGDAVLNLVVAEYL 63 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 Y+ + R EG+++++RA +V + LA AR LG+ L LG GE SGG +R+SILAD V Sbjct: 64 YNHYGRKAEGELTKIRAKVVCEDALAIFARNINLGQYLLLGRGEEMSGGRKRKSILADAV 123 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+IG ++LD ++TV++ I+ + + E + GD D K++LQE +Q R +Y + Sbjct: 124 EAVIGAIYLDQGLETVQRFIIRQLEELISETASGD-YYDYKSKLQELVQARDKENVSYAI 182 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 ++ G AH + F G G S+++AEQ AA++ L+ Sbjct: 183 IEESGPAHAKVFVAGVY-YREQLLATGEGKSKKEAEQKAAQKVLQ 226 >UniRef50_Q053L4 Ribonuclease 3 n=4 Tax=Leptospira RepID=RNC_LEPBL Length = 247 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 10/232 (4%) Query: 2 NPIVI---NRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVI 52 NP I +L +K+G F+ E A H S +++ NERLEFLGDS+L V Sbjct: 14 NPERIQSFKKLSKKIGIKFSKIEYYNTAFIHSSYKNENPEILEDNERLEFLGDSVLGLVA 73 Query: 53 ANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESIL 112 A +L+ ++P+ EG++SR+++ +V L +A + LGE L LG GE S G R I Sbjct: 74 ARSLFQKYPKASEGELSRIKSKIVSTPILNSIAEKLNLGEYLLLGKGEKNSQGKGRRKIA 133 Query: 113 ADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLP 172 A+ E+L+G ++LD + EK I+ + + +D KT+LQEY Q LP Sbjct: 134 ANLFESLVGAIYLDRGFEVAEKFIVQHLLEFAENPDMEESVRDYKTQLQEYSQKHFKTLP 193 Query: 173 TYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 Y + G H + F + ++ E G G+S++ AEQ AA++ ++ Sbjct: 194 VYRMKGESGPDHSKMFQVSVRIRDQWE-ASGYGASKKIAEQNAAKELYIRIR 244 >UniRef50_D2RKZ6 Ribonuclease III n=2 Tax=Acidaminococcus RepID=D2RKZ6_ACIFE Length = 234 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 88/227 (38%), Positives = 128/227 (56%), Gaps = 9/227 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANALY 57 + L R+LG LL ALTH S + + HN+RLEFLGDS+LS V++ +Y Sbjct: 9 LEGLCRQLGMEMKDLHLLDMALTHTSYAYESKKNPRPQHNQRLEFLGDSVLSLVVSTHIY 68 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 P++DEG++S++RA LV TLA+LA E LG+ L LG GE+ G SILAD E Sbjct: 69 KTCPQMDEGELSKLRAFLVCEETLAQLATENHLGDHLLLGKGEINLDGEENPSILADAFE 128 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 +++G +LD V L+ +R+ E++ +D KTRLQE +Q Y V Sbjct: 129 SVLGAYYLDQGFARVTGLLNRLLISRIPELTADGIDRDYKTRLQEVVQKDGPAEILYDQV 188 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G +H++ F + V+G +E G G ++++AEQ AA +ALK L Sbjct: 189 SAEGPSHNRTFVMRVLVNG-NELGKGRGRTKKEAEQRAAREALKALR 234 >UniRef50_D1B4H0 Ribonuclease III n=5 Tax=Campylobacterales RepID=D1B4H0_SULD5 Length = 227 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 79/222 (35%), Positives = 130/222 (58%), Gaps = 2/222 (0%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRVD 64 + LQ++LGY F +Q L+ +ALTH+S+ +NERLEFLGD++L ++ LY F V Sbjct: 5 LEALQKRLGYQFKNQNLIIEALTHKSSKQPYNNERLEFLGDAVLDLIVGEYLYKEFLGVA 64 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG++S++RA+LV + +LAR LGE + + E + G + S+L++ EA+IG ++ Sbjct: 65 EGELSKLRASLVNEKSFEKLARLLHLGESIYISLAEENNNGREKPSLLSNAFEAIIGALY 124 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 L++ ++ L ++ + +I +D KT LQE Q P Y +V+ G H Sbjct: 125 LEAGLEKARTLAISLLEEAYPKIDMDAIFRDHKTTLQELTQAHFGVTPEYRLVRSFGPDH 184 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 +EF I V G S+ + +G S+++A+Q AA AL+ L+ E Sbjct: 185 QKEFEIAVSVRG-SDLSLASGKSKKEAQQKAALLALEILKKE 225 >UniRef50_C2EW95 Ribonuclease III n=4 Tax=Lactobacillaceae RepID=C2EW95_9LACO Length = 251 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 121/227 (53%), Gaps = 9/227 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHR 59 + L ++ F + +LL +A T S ++H ER+EFLGD++L +++ +Y R Sbjct: 25 DYLAKEFDIHFTNPDLLAEAFTQASYVNEHPHQGLKFYERIEFLGDAVLELIVSEYIYKR 84 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP + +G ++R+RA +V ++ ++ A+E + +RLG GE +G +R +L D E+ Sbjct: 85 FPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGHGEEMAGARQRPGLLCDIFESF 144 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG ++LD VEK + +LD D D KT LQE+LQ Y ++Q Sbjct: 145 IGALYLDQGRPAVEKFVRRVIFPKLDLGW-FDHAVDAKTSLQEFLQRDGDVDIEYHLLQE 203 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G +D EF ++ G GTGSS++ AE AA QAL KL E Sbjct: 204 SGTENDPEFKVNVSADG-KVIGEGTGSSKKHAEMKAASQALNKLRQE 249 >UniRef50_Q9ZLH2 Ribonuclease 3 n=45 Tax=Epsilonproteobacteria RepID=RNC_HELPJ Length = 239 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 83/217 (38%), Positives = 127/217 (58%), Gaps = 2/217 (0%) Query: 9 LQRKLGYTFNHQELLQQALTHRSAS-SKHNERLEFLGDSILSYVIANALYHRFPRVDEGD 67 L++ LGY+F + LL+QALTH+S + +NERLEFLGD++L VI LYH+F + DEG Sbjct: 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGK 80 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS 127 +S++RA++V + +LA+ L + LR+ E S G + SIL+ EAL+ GV+L++ Sbjct: 81 LSKLRASIVSAHGFTKLAKAIALQDYLRVSSSEEISKGREKPSILSSAFEALMAGVYLEA 140 Query: 128 DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 + V K+I N + D KT LQE Q + +PTY ++Q +G H +E Sbjct: 141 GLAKVRKIIQNLLNRAYKRLDLEHLFMDYKTALQELTQAQFCVIPTYQLLQEKGPDHHKE 200 Query: 188 FTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 F + + G S+++AEQ A QAL+KL+ Sbjct: 201 FEMALYIQD-KMYATAKGKSKKEAEQQCAYQALQKLK 236 >UniRef50_C5SLX4 Ribonuclease III n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SLX4_9CAUL Length = 242 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 88/220 (40%), Positives = 122/220 (55%), Gaps = 10/220 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSAS--------SKHNERLEFLGDSILSYVIANAL 56 V++ L+ KLGY F ++LL ALTH S S S NERLEFLGD +L ++A AL Sbjct: 15 VLDELEAKLGYRFADRQLLDSALTHASVSDGRPKKTVSSDNERLEFLGDRVLGLLVAEAL 74 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 FP+ EG+MS+ LV T A +A +G +RL PGE KSGG +IL D Sbjct: 75 MQAFPQAAEGEMSQRLHGLVSRETCAAVAMSLGVGAAMRLAPGETKSGGRSNLTILGDAC 134 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EALI V+LD +T ++ +Q + S +PK+ LQE+ + LP P Y + Sbjct: 135 EALIAAVYLDGGFETARRIFGPLWQPHI-RASHSRSHLNPKSHLQEWAAQKKLPSPKYEI 193 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAA 216 V+ G H F + + G +PVV +G SR++AE+AAA Sbjct: 194 VERSGPDHAPIFKVALTLEGY-DPVVASGKSRQEAEKAAA 232 >UniRef50_A8SP75 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SP75_9FIRM Length = 232 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 128/227 (56%), Gaps = 12/227 (5%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHR 59 + L++K+GY F LL ALTH S +++ ERLEFLGD+IL Y+++ L+ + Sbjct: 9 DELEKKIGYQFKDINLLITALTHTSFANELKVNKTDSYERLEFLGDAILEYIVSEYLFLK 68 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +EG ++++RA+LV TL++++ G+ +RL GE +GG +R+SIL D E++ Sbjct: 69 KKEYEEGRLTKLRASLVCEFTLSQISESLGYGDYVRLSKGEELTGGRKRKSILCDLFESV 128 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G ++LD I+ ++ + + LD++ D K+ LQE+ Q L +Y +++ Sbjct: 129 LGAMYLDGGIEPAKEFVHRFL---LDDVETKSLFYDAKSTLQEFCQKHGRQL-SYELIEE 184 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 RG H + F ++G G G +R+ +EQ AA + L +L + Sbjct: 185 RGPEHSKIFVSDAVING-KVTARGEGPNRKTSEQMAAYKTLLQLRKK 230 >UniRef50_D0MGH0 Ribonuclease III n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGH0_RHOM4 Length = 260 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 8/215 (3%) Query: 18 NHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 + L +QALTHRS NERLEFLGD++L +V+A LY FP +EG ++R Sbjct: 38 RNAALYEQALTHRSVLRGQPDSHLHSNERLEFLGDAVLGFVVAAYLYEHFPDRNEGFLTR 97 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 +RA LV LA+ AR LG +RL ++GG +SIL+D EAL+G ++LD ++ Sbjct: 98 LRAKLVNREALAQAARRLGLGAHVRLSENMERAGGRDNDSILSDAFEALVGAIYLDLGLE 157 Query: 131 TVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 + LD + + + K+ L E+ Q R P P Y VV G +H + FT+ Sbjct: 158 AARAFVERALLAPLDLEALARRPDNYKSLLLEFAQARGWPQPRYRVVAEEGPSHARTFTV 217 Query: 191 HCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 + G GT S+++AEQ AA +AL +L+ Sbjct: 218 EAWI-GNRRLGRGTAGSKKQAEQQAAREALARLQA 251 >UniRef50_Q2GIW0 Ribonuclease 3 n=17 Tax=Anaplasmataceae RepID=RNC_ANAPZ Length = 236 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 80/219 (36%), Positives = 123/219 (56%), Gaps = 6/219 (2%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPRV 63 ++ + GY F ELL+ A+TH S +++ ERLEFLGD++L V++ LY FP Sbjct: 14 EKVFKISGYRFQDHELLKTAVTHPSIAAERYASYERLEFLGDAVLGLVVSEMLYTLFPDD 73 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG +++ R LVRG+ + E+A+ LG L + GEL SGG S L + +EALIG + Sbjct: 74 SEGLLTKKRIALVRGSKVVEIAQSLNLGNILLMSKGELTSGGISNNSNLENALEALIGAI 133 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 ++D +++V IL ++ L +D KT LQE+ QG + +P+Y ++ G Sbjct: 134 YVDGGLESVRHFILQHWKP-LATNLADTPLQDAKTALQEWAQGHNFAIPSYRLINKSGLE 192 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 H FT+ V+G V TG ++ AE AAA+ L+K Sbjct: 193 HAPVFTVEVTVNGQR--VHATGCKKKYAEIAAAKLMLEK 229 >UniRef50_D1VB32 Ribonuclease III n=1 Tax=Frankia sp. EuI1c RepID=D1VB32_9ACTO Length = 319 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 124/213 (58%), Gaps = 10/213 (4%) Query: 20 QELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 +LL +ALTHRS + ++ NERLEFLGD++L V+ +ALY+R P + EG +++ RA+ Sbjct: 43 PDLLDRALTHRSYAYENGGLPTNERLEFLGDAVLQLVVTDALYNRHPDLPEGALAKQRAS 102 Query: 75 LVRGNTLAELAREFE---LGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 +V LA++AR +G L LG GE +GG + SILADT+EALIG V+L+ ++ Sbjct: 103 VVNSRALADVARVIGPKGIGPYLLLGKGEETTGGRDKASILADTLEALIGAVYLELGLEV 162 Query: 132 VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 +L+ ++ LDE + D KT LQE + P Y+V G H + FT Sbjct: 163 AAQLVHRYFDPLLDEAAGRGAGLDWKTSLQERTAELGMGPPDYVVTD-SGPDHAKRFTAR 221 Query: 192 CQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 ++S G G S+++AEQ AAE+A LE Sbjct: 222 ARISD-RIYGEGEGGSKKEAEQRAAERAFLALE 253 >UniRef50_C5CSF5 Ribonuclease 3 n=6 Tax=Burkholderiales RepID=RNC_VARPS Length = 228 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 105/220 (47%), Positives = 135/220 (61%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 + LQ +L ++F+ LLQ ALTHRS S+ HNERLEFLGDS+L+ +++ LY R + E Sbjct: 5 LTALQERLKHSFSDTRLLQLALTHRSFSADHNERLEFLGDSVLNLAVSHLLYTRLSALPE 64 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 GD+SR+RA LV+ +TL LA E +L LRLG GE +SGG R SILAD +EALIG V+L Sbjct: 65 GDLSRVRANLVKQDTLHRLALELQLSPLLRLGEGEARSGGPNRPSILADALEALIGAVYL 124 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ E L+ Y++ KDPKT LQE+LQG + LP Y V G AH Sbjct: 125 DAGFSAAEALVRRLYESVEINPRMDAVAKDPKTELQEWLQGHKMKLPVYRVAATLGAAHK 184 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 Q F + C+V L G G SRR EQAAA L +L+ Sbjct: 185 QTFDVECEVPELGLRERGIGGSRRAGEQAAAAAMLIRLKA 224 >UniRef50_C8NEF3 Ribonuclease III n=2 Tax=Granulicatella RepID=C8NEF3_9LACT Length = 236 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 127/222 (57%), Gaps = 9/222 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 L+ K +FN++ LL +A+TH S +++H NER+EFLGD++L I++ L+ +FP Sbjct: 11 LKEKFDISFNNEALLMEAMTHSSYANEHKEMKGIYNERIEFLGDAVLELTISDWLFRQFP 70 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG ++++RA +V ++L+ LA+E L E L LG GE SGG + +IL D EA IG Sbjct: 71 HFQEGQLTKLRAQIVCEDSLSLLAKECSLNEYLLLGKGETLSGGREKPAILCDVFEAFIG 130 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD + V++ + ++ + D KT LQEYLQ Y +V+ G Sbjct: 131 ALYLDKGVNEVQRFLNLVVIPKIKNG-RYELITDFKTELQEYLQQNGPVHIRYELVKEEG 189 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 +HD+ FT+ V G +G +++ AEQ AA+ +++L Sbjct: 190 PSHDKTFTVQLIVDGKKYK-TASGKTKKAAEQMAAKLTMEEL 230 >UniRef50_C4V2U1 Ribonuclease III n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2U1_9FIRM Length = 238 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 80/215 (37%), Positives = 116/215 (53%), Gaps = 7/215 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59 + RL L F LL++ALTH S ++ HNERLEFLGD++L I+ LY Sbjct: 13 LVRLSAFLDVDFADLSLLEEALTHPSYVNEARERATHNERLEFLGDAVLELAISTYLYVA 72 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P EG++++MRA+LV+ TLA LAR LG LR+G GE+ GG R++ L + EA+ Sbjct: 73 YPHCSEGELTKMRASLVQSETLARLARRLHLGAHLRMGRGEMLGGGAERQNNLENVFEAV 132 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG V+LD + + + + +D KT LQEY+QG Y V Sbjct: 133 IGAVYLDRGWDAAYSYVQRQFTEEVTRLRQEHAVQDYKTMLQEYVQGHRHECIAYEQVAE 192 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQA 214 G HD+ FT+ ++ G+ G G S+++AEQ Sbjct: 193 SGPDHDKRFTMRVRI-GMEVLGEGIGRSKKEAEQH 226 >UniRef50_Q2W513 DsRNA-specific ribonuclease n=2 Tax=Magnetospirillum RepID=Q2W513_MAGSA Length = 228 Score = 233 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 91/225 (40%), Positives = 121/225 (53%), Gaps = 10/225 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANALYHR 59 L LG+ F ELL QALTH S +S ERLEFLGD +L V+A L+ R Sbjct: 6 AELSALLGHAFARPELLAQALTHPSMHQGRKSRTSDPYERLEFLGDRVLGLVVAEMLFSR 65 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EG ++R A LVR +A +A E LG CL L GE +GG ILAD EA+ Sbjct: 66 FPNEAEGALARRHAALVRREAVARIATEIGLGRCLVLAKGEDDAGGRANPGILADACEAV 125 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG ++ D+ + + ++ ++E KD KT LQE+ QGR PLP Y V+ Sbjct: 126 IGALYADAGFAVAASFVRSRWEPMMEE--ALAPPKDAKTGLQEWAQGRGKPLPHYQVLGQ 183 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H+ F I V G+ VG G+S+R AEQAAA L++++ Sbjct: 184 EGPPHEPIFLIEVSVEGVG-SAVGRGASKRVAEQAAAGLLLEQVK 227 >UniRef50_A5VKP2 Ribonuclease 3 n=25 Tax=Lactobacillus RepID=RNC_LACRD Length = 233 Score = 233 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 9/227 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHR 59 + L ++ F++ LL +A T S ++H ER+EFLGD++L +++ +Y R Sbjct: 7 DYLAKEFNIHFDNPALLAEAFTQASYVNEHPNQGLKYYERIEFLGDAVLELIVSEYIYKR 66 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP + +G ++R+RA +V ++ ++ A+E + +RLG GE +G R +L D E+ Sbjct: 67 FPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGHGEEMAGARERPGLLCDIFESF 126 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG ++LD VEK + +LD + D D KT LQE+LQ Y +V+ Sbjct: 127 IGALYLDQGRPAVEKFVQRVIFPKLD-MGWFDHAVDAKTSLQEFLQRDGDIAIEYHLVEE 185 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G +D EF ++ +G G GSS++ AE AA+QAL + + Sbjct: 186 SGTENDPEFKVNVTANG-DVIGEGKGSSKKHAEMQAAQQALDNMRNK 231 >UniRef50_A7NAR0 Ribonuclease 3 n=18 Tax=Francisella RepID=RNC_FRATF Length = 230 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 100/218 (45%), Positives = 139/218 (63%), Gaps = 3/218 (1%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 +R LGY F LL +ALTHRS + K+ ERLEFLGDS+LS+VIA LY +F + EG Sbjct: 6 SRFYNILGYNFKDYTLLIRALTHRSKTKKNYERLEFLGDSVLSFVIAEVLYKQFTDLAEG 65 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 +S++R+ LV+G TLA+LA ++ E + LG E GG +RE IL D EA+IG ++LD Sbjct: 66 KLSQLRSKLVKGTTLAQLASSLKMDEYIILGASE--QGGNKREKILEDVFEAVIGAIYLD 123 Query: 127 SDIQTVEKLILNWYQTRLDEISPGD-KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 SD TV+K+IL WYQ + I+ K KD K++LQE L L LP Y + + G+ H+ Sbjct: 124 SDFATVKKVILKWYQPIISSINLDTIKVKDSKSKLQEILLQNALSLPEYSIETIDGKDHE 183 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 Q+FT+ L+ V G+SR+KAEQ AE+ ++ L Sbjct: 184 QQFTVVAVSKDLNLRVKAQGTSRKKAEQKTAEKMIEML 221 >UniRef50_C3Y2N8 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y2N8_BRAFL Length = 1490 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 11/230 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 + + + G F H LL +A THR+ HN+RLEFLGDS++ V + LY F Sbjct: 1199 LTEFESRCGMEFKHVRLLARAFTHRTVGFNNLTLGHNQRLEFLGDSVMQMVSSEYLYKHF 1258 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG +S +R++LV T A ++++ + E + + R+ LAD +EA + Sbjct: 1259 PDHHEGHLSLLRSSLVNNRTQALVSQDLGMEEYIISSDKARQGKLSLRQKTLADLMEAFM 1318 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 G +++D ++ V + + RL E + DPK++LQ+ +G+ +P Y Sbjct: 1319 GALYVDQGLEYVCVFMNVCFFPRLREFIMNQEWNDPKSQLQQCCLTLRTEGKEPDIPFYK 1378 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 ++ G +H +++T+ G G GSS ++AE AAA ALK + Sbjct: 1379 ILDKAGPSHARKYTVAVYFKG-ERIGTGVGSSIQQAEMAAARDALKNYKF 1427 Score = 116 bits (290), Expect = 7e-25, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 59/108 (54%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ ++ LY FP ++EG ++ R +V+ LA LA++ L E + Sbjct: 1088 NHNERLEFLGDAVVEFLTSSHLYFMFPDLEEGGLATYRTAIVQNQHLAVLAKKLRLDEFM 1147 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQT 142 G +A+ +EALIG +++ ++ +KL + Sbjct: 1148 LYAHGPDLCRESDLRHAMANCLEALIGAMYMQQGLEETKKLFCRLLFS 1195 >UniRef50_Q5GTI3 Ribonuclease 3 n=17 Tax=Rickettsiales RepID=RNC_WOLTR Length = 243 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 80/224 (35%), Positives = 128/224 (57%), Gaps = 10/224 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASS-------KHNERLEFLGDSILSYVIANALYHR 59 + + + + Y F + +L++ALTH S + ++ ERLEFLGDSIL+ +++ L+ Sbjct: 16 DTISKIINYRFKNDAILEEALTHPSLNKRNSKNQIENYERLEFLGDSILNMIVSAILFRL 75 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP+ EG ++R + LV GNT+A +A+E +LG + + E +GG R L + +EAL Sbjct: 76 FPKEKEGALARRKTDLVCGNTIANVAKEIKLGNFIIMNNSERCNGGKRNLKNLENALEAL 135 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG +++D V+K + ++ R + +DPKT LQE+ Q LPLP Y +++ Sbjct: 136 IGAIYIDGGFANVKKFVTKHWEERAKGMLS--LPQDPKTSLQEWTQKNKLPLPEYELMKQ 193 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G AH EFTI + + V SS++ AEQ AAE L+K+ Sbjct: 194 TGPAHSPEFTISICIENYGK-VFACASSKKVAEQKAAELMLEKI 236 >UniRef50_B0K1V8 Ribonuclease III n=19 Tax=Clostridia RepID=B0K1V8_THEPX Length = 246 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 124/211 (58%), Gaps = 7/211 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 ++ L+ ++ Y+F + LL +ALTH S + + NERLEFLGDS+LS VI+ LY Sbjct: 19 NLSELEERINYSFKDKNLLIEALTHSSWAHEGKNSKISNERLEFLGDSVLSLVISEYLYK 78 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++EG +S+ RA +V +LA ARE ELG LR+G GE +GG R+SILAD +EA Sbjct: 79 NRKDLEEGSLSKYRAEIVCEPSLARCAREIELGNFLRIGKGEELTGGRERDSILADAMEA 138 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++ V+LD ++ V +IL ++ ++E+ G +D KT+LQE +Q + Y +++ Sbjct: 139 ILAAVYLDGGLEVVRNVILELFKNIIEEVLEGLIYRDYKTKLQEVVQSMEIGKIIYELIE 198 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G H++ F ++ G G G S++ Sbjct: 199 EMGPDHNKTFVTQVRI-GDVILGKGYGKSKK 228 >UniRef50_C8W741 Ribonuclease III n=3 Tax=Atopobium RepID=C8W741_ATOPD Length = 243 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 72/226 (31%), Positives = 123/226 (54%), Gaps = 7/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS-----SKHNERLEFLGDSILSYVIANALYHRF 60 + + G+TF +++L++ ALTH SA S ERLEFLGDSIL +IA L+ R+ Sbjct: 7 VAAAEAICGHTFINKDLIEAALTHPSAVEGKPVSASYERLEFLGDSILGAIIATELFERY 66 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P +DEG ++R++ +LV G+TL+ ++ + + +G E +G +S L + E+++ Sbjct: 67 PDMDEGQLTRLKISLVSGHTLSIVSDTLGVSPLIVMGISEKGTGKRGMKSALENVYESIV 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD+ + ++ + + + PK+RLQE +Q + P Y ++ Sbjct: 127 GALYLDAGFEPTRDFVIRTLGPHISP-TLAVRSVSPKSRLQEAVQAQGKATPEYKLIGES 185 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G AH FT V GL + G G S++ AE AA+ AL +L ++ Sbjct: 186 GPAHTPTFTAVVFVDGL-KVGRGQGPSKKAAESEAAQDALVRLGVD 230 >UniRef50_C3RKG6 Ribonuclease III n=5 Tax=Bacteria RepID=C3RKG6_9MOLU Length = 226 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 76/226 (33%), Positives = 134/226 (59%), Gaps = 8/226 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALY 57 + + + +K+ + + E+ ++A TH S ++++ ERLEFLGD++L Y ++ ++ Sbjct: 1 MELEQFLQKMEIPYQNIEIFKEAFTHPSYANENKMKNHDYERLEFLGDAVLQYHVSRHIF 60 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +P + EG ++++RA LVR +LA ARE +LG + LG GEL +GG R+S+LAD E Sbjct: 61 DLYPELPEGRLTKLRAKLVREESLARFARELDLGPLIYLGAGELNNGGRDRDSVLADIFE 120 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A +G + D + VEK++ +++++ D+ D KT+LQE +Q TY ++ Sbjct: 121 AFMGAICHDCGPEYVEKMLDITIYKHVEDVN-YDEITDFKTKLQELIQADQRKTVTYDLI 179 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G +++ F + ++ + VG GSS+++AEQ AA+ AL KL Sbjct: 180 SSSGPSNNPVFEMAVKMDEM-VLGVGVGSSKKRAEQQAAKDALNKL 224 >UniRef50_B6WR93 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR93_9DELT Length = 243 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 88/232 (37%), Positives = 131/232 (56%), Gaps = 8/232 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIAN 54 ++ + R++R L Y F+ E + ALTH S +++H NERLEFLGD++L I+ Sbjct: 11 ISAADLERIERILDYHFSRPERVALALTHSSWANEHGLGQAHNERLEFLGDAVLELCISW 70 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 L+ RFP+ EGDM+R+R+ LV +LA+ ARE + + LRLG GE + GG R+++L+D Sbjct: 71 ELFTRFPQAREGDMTRVRSQLVGTTSLAQRARETGIDQLLRLGRGEEQQGGRSRDAVLSD 130 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPG-DKQKDPKTRLQEYLQGRHLPLPT 173 EA++ V+ D +K++ + T LDE+S G K KD KT LQE P Sbjct: 131 VFEAVLASVYEDGGYAAAQKVVARIFGTLLDEVSVGKPKTKDFKTSLQERSVALFHDRPV 190 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 Y + G H + FT+ + + +GSS +KAEQ AA AL L+ Sbjct: 191 YTTLACEGPEHARHFTVQVSLP-SGQQFTASGSSCKKAEQEAARLALCALDA 241 >UniRef50_C1Q9X5 Ribonuclease III n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q9X5_9SPIR Length = 246 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 137/234 (58%), Gaps = 11/234 (4%) Query: 1 MNPIVINRL----QRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSY 50 MN I I + Q + Y F ++ L +A+THR+ +++ N+RLEFLGDS+LS Sbjct: 1 MNIINIEEILNNCQEVIKYEFRNKSYLLEAITHRTYANESKKKMKYNQRLEFLGDSVLSL 60 Query: 51 VIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRES 110 +I++ L+ ++ EG +S+++++LV +LA++++E +LG+ + LG GE SGG R++ Sbjct: 61 IISDYLFKKYNTSKEGLLSKVKSSLVSQKSLADISKELKLGDFILLGHGEEVSGGRYRDN 120 Query: 111 ILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP 170 +L D EA++G ++LDS I + ++ Y+ RL+ + + KD KT QE +Q +H Sbjct: 121 MLEDLFEAIVGAIYLDSGINNAAQFVMKAYKNRLNNLDIENFDKDYKTIFQELIQKKHKT 180 Query: 171 LPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 P Y + E + + F V+ G G S+++AE AA++AL+ +E Sbjct: 181 SPVYKSYEYHDENNHEMFKSEVYVND-KNFSSGIGKSKKEAETEAAKKALENIE 233 >UniRef50_C8X2M7 Ribonuclease III n=4 Tax=Desulfovibrionales RepID=C8X2M7_DESRD Length = 237 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 86/233 (36%), Positives = 127/233 (54%), Gaps = 9/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIAN 54 M+ V+ +Q++L YTF Q+LL ALTH S +++H NERLEFLGD++L I+ Sbjct: 1 MDDSVLRLVQQRLQYTFRDQQLLLLALTHSSYANEHPHIQEHNERLEFLGDAVLELAISE 60 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY R+P EG ++ +R+ LV LA L R+ E+ L LG GE GG R++IL D Sbjct: 61 ELYLRYPEAPEGSLTSLRSKLVSEPALAALGRQLEIAPALFLGRGEESQGGRERDAILCD 120 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISP--GDKQKDPKTRLQEYLQGRHLPLP 172 +E++ G +FLDSD + IL Y + ++ +D K+RLQE Q P Sbjct: 121 VMESIFGAIFLDSDYDRAKTCILELYVDKWPSAPSLGHERLRDFKSRLQECTQQLFKDRP 180 Query: 173 TYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 Y +V G H + + + + S+ SS +KAEQ AA +AL+ L+ Sbjct: 181 VYHLVDSTGPEHAKVYHVRVDLPNGSQ-ASAADSSVKKAEQQAARKALESLQA 232 >UniRef50_B2S448 Ribonuclease 3 n=2 Tax=Treponema pallidum RepID=RNC_TREPS Length = 254 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 85/226 (37%), Positives = 120/226 (53%), Gaps = 9/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS--------ASSKHNERLEFLGDSILSYVIANALY 57 + RLQ LG F L QAL+HRS +HNER+EFLGD++L V A LY Sbjct: 24 LRRLQETLGVKFRDPTALDQALSHRSLFSSKEDHCGVRHNERMEFLGDAVLGAVAAACLY 83 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 P EGD+++ +A LV +TL+++A + L LG GE SGG +++ILAD E Sbjct: 84 RALPDSHEGDLAKTKAVLVSTDTLSDIALSLRIDHYLLLGKGEELSGGRHKKAILADATE 143 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+IG +FLDS + E+ +L R+ I + D K+ LQ R+ P Y VV Sbjct: 144 AVIGALFLDSGFKAAERFVLRLLLPRVRPIREKNLHHDYKSTLQVLAHQRYRSKPEYTVV 203 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + G H F + V G + G G+S++ AEQ AA A ++L Sbjct: 204 KRTGPDHSVRFWVDVTV-GDARFGPGYGTSKKSAEQCAARLAWEQL 248 >UniRef50_C6XJG5 Ribonuclease III n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJG5_HIRBI Length = 255 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 81/227 (35%), Positives = 120/227 (52%), Gaps = 8/227 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSA-----SSKHNERLEFLGDSILSYVIANA 55 +N +Q G F LL +A TH SA + NERLEFLGD +L V A+ Sbjct: 27 LNNDARATIQEIAGIKFKDVSLLDRAFTHTSAVPGEAADWSNERLEFLGDRVLGLVAASQ 86 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L RF + EG ++ LV +T A++A E LG+ L L E +GG + S+LA+ Sbjct: 87 LITRFEKEREGGLAPRLNALVSRDTCAKIAAEINLGQYLILDASESSAGGTTKPSLLANV 146 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EALIG ++LD+ + E+ I+ +++ + D +DPK+ LQE+ QG P P Y Sbjct: 147 TEALIGAIYLDAGLAASERFIVKYWKEYFK--TLTDVPRDPKSALQEWAQGDGRPAPNYE 204 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 + G H FT+ +V G+ P G GSS+++A++AAA L Sbjct: 205 NIDRTGPDHAPVFTVEVRVEGV-RPAKGEGSSKQEAQRAAASAMLNN 250 >UniRef50_B6IN01 Ribonuclease III n=1 Tax=Rhodospirillum centenum SW RepID=B6IN01_RHOCS Length = 236 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 112/212 (52%), Gaps = 9/212 (4%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIANALY 57 ++ L+ LGY F H++LL QALTH S + + ERLEFLGD +L VIA L Sbjct: 9 PPLSELETGLGYHFRHRDLLVQALTHPSLGGVERNAGRGYERLEFLGDRVLGLVIAEWLL 68 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 RFP EG ++R LVR L +A LG LRL P E SGG + +ILAD E Sbjct: 69 ERFPAEAEGALARRHTALVRAEALTVVAETIGLGPFLRLAPSERDSGGQAKPAILADACE 128 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+IG +F D ++ LI + ++ + +DPKT LQE+ GR PLP Y + Sbjct: 129 AVIGAIFQDGGLEPARTLIRTRWTPLIE--ADLSPPQDPKTALQEWALGRGRPLPAYETL 186 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G H F + +V G +EP TG S+R Sbjct: 187 SREGPDHAPVFRVRVRVEG-AEPATATGPSKR 217 >UniRef50_Q3ZXY9 Ribonuclease 3 n=5 Tax=Dehalococcoides RepID=RNC_DEHSC Length = 237 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 74/228 (32%), Positives = 121/228 (53%), Gaps = 8/228 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANAL 56 + + L+ LG F LL+QAL H S +++ NER+EFLGD++L + A+ L Sbjct: 2 LDLTELENSLGVKFEQPSLLEQALIHTSWVNENPNHSSGSNERMEFLGDAVLGVIFADRL 61 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 YH FP + EGD++R R+ LVR +L +A LG+ L LG GE S G + + LA Sbjct: 62 YHDFPDIQEGDLTRFRSLLVRRESLVRVALGINLGKYLYLGRGEDVSKGRFKPANLAGAF 121 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA++ +++D + ++I ++T ++ + D K+RLQE +Q + P Y + Sbjct: 122 EAVLAAIYIDKGMDVTREVIFRLFKTEMERVQTLSSNIDYKSRLQELIQAQLQLTPRYRI 181 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H++ F G+G S+++AE AA+ AL++ E Sbjct: 182 TNFSGPEHNRLFIAEVYAED-RVFAEGSGRSKKEAETNAAKVALQQFE 228 >UniRef50_D1BLX9 Ribonuclease III n=3 Tax=Veillonella RepID=D1BLX9_VEIPT Length = 246 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 78/225 (34%), Positives = 130/225 (57%), Gaps = 8/225 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 ++ L +L + ++ A TH S +++H N+RLEFLGD++L +I L+ Sbjct: 19 LHELVARLDIPVSDISIIDCAFTHTSYANEHKSKHIHHNQRLEFLGDAVLDLIIGEYLFK 78 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +P + EG++++++A V ++LA ++R +LG+ L LG GE SGG R SILADT E+ Sbjct: 79 TYPDMAEGNLTKIKAATVCEDSLASVSRSLQLGQYLLLGHGERASGGNDRNSILADTFES 138 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LIG +++ +D QT +L T + + G + KD KT LQEY+Q Y ++ Sbjct: 139 LIGAIYISTDYQTAMAFVLKHLTTYIMQALEGKRGKDYKTLLQEYVQRDGDKHIVYHLLS 198 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F + +++G++ G+G S++ AEQ AA+ L+KL Sbjct: 199 ESGPDHAKTFHMEVEINGVTYEA-GSGKSKKIAEQHAAQLTLEKL 242 >UniRef50_Q0F3I4 Ribonuclease III n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3I4_9PROT Length = 229 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 97/224 (43%), Positives = 134/224 (59%), Gaps = 11/224 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTH----RSASSKHNERLEFLGDSILSYVIANALYHRFP 61 + +LQ+ +GY FN+ LL++ALTH RSA S ERLEFLGD++L V+A L+ FP Sbjct: 8 LQQLQQVIGYRFNNPALLKRALTHCSALRSAVSGDLERLEFLGDAVLGLVVAEYLHQSFP 67 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG +SRMRA LV ++L +A ++ L CL +G GE G + SI+A+ VEA+IG Sbjct: 68 EEPEGQLSRMRANLVCRDSLLVVASDWRLSACLIVGDGERGEYGIKSPSIVANAVEAVIG 127 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 VF +S +++L ++ LD+I D +D K+RLQE QG+ LP Y++V RG Sbjct: 128 AVFEESGWDASRRVVLTAWRPMLDDIGRVD-PRDAKSRLQELTQGKGWGLPEYVLVD-RG 185 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSS--RRKAEQAAAEQALKKL 223 + F C V E VVG GS ++ AE AAAEQA KL Sbjct: 186 VGYQPRFEATCSV---QEKVVGHGSGERKKLAEIAAAEQAWSKL 226 >UniRef50_UPI000174552F putative Ribonuclease III n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174552F Length = 238 Score = 230 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 7/211 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59 ++ L+ ++ Y F ELLQ+ALTH S + HN+RLE+LGD++L V++ A+YH+ Sbjct: 1 MDSLESRIAYQFKQPELLQEALTHPSLPYESKNPQRHNQRLEYLGDAVLQLVLSEAIYHQ 60 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP DEG ++++R LV+ TLA +AR+ LG L LG GE +GG RES LAD +E++ Sbjct: 61 FPLDDEGLLTKLRTRLVQTRTLAHIARQLCLGRDLLLGKGEESNGGRSRESTLADVMESI 120 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG V+LD I+ V +L + L + + +PK +LQE LQG PTY ++ Sbjct: 121 IGAVYLDGGIEAVRPFVLQHWSHDLAALQHSPVELNPKGQLQELLQGEGGNTPTYRIIAA 180 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 G H + F V + GTG S+++ Sbjct: 181 EGPDHQKVFQ-AVVVWQDRDLAAGTGRSKKE 210 >UniRef50_B7JZ63 Ribonuclease III n=3 Tax=Cyanobacteria RepID=B7JZ63_CYAP8 Length = 225 Score = 230 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 79/221 (35%), Positives = 128/221 (57%), Gaps = 13/221 (5%) Query: 16 TFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 F +QELL ALTHRS ++H NERLEFLGD+IL +V++ LY R+P + E ++ Sbjct: 6 QFKNQELLDCALTHRSYINEHFEVTEHNERLEFLGDAILQFVVSEELYRRYPELTEAQLT 65 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 R+R+ LV LA+ AR +LG+ + LG G +K GG ++L+D EA+IG FLD+ I Sbjct: 66 RLRSKLVDEPQLAQFARTLDLGQLMYLGQGAIKDGGRENPALLSDAFEAIIGAYFLDAGI 125 Query: 130 QTVEKLILNWYQTRLDE------ISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 + V+ + + ++ +D + D K RLQ++ ++ +P Y +++ G Sbjct: 126 EAVQYFVRSLFKEAIDNLVLPESRTVSPSIIDVKNRLQQWALEQYKQVPEYFLIEQSGPD 185 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 H +EF +++G G G +++A +AAA+ AL KL+ Sbjct: 186 HAKEFVFGVRING-QVLGTGKGRRKQEATKAAAQDALDKLQ 225 >UniRef50_B8E199 Ribonuclease III n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E199_DICTD Length = 238 Score = 229 bits (585), Expect = 4e-59, Method: Composition-based stats. Identities = 76/228 (33%), Positives = 129/228 (56%), Gaps = 11/228 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYH 58 ++ R++ K +FN ++LL +ALTH S ++ N+RLEFLGD++L+ +I L+ Sbjct: 14 IVERVKEKTRVSFNDKDLLIEALTHPSFKHENPNFKQDNQRLEFLGDAVLNMIITEILFQ 73 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 R+ EG +++ R LV+ TL + A+ +LGE + LG GE K GG + SIL+D EA Sbjct: 74 RYREASEGFLTQKRIYLVKEETLYKKAKSLDLGELILLGVGEEKQGGRDKISILSDLFEA 133 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 IG ++LD + + + ++ ++ I + + D K LQ YLQ P Y+V + Sbjct: 134 FIGALYLDKGYEYTKNFVEEIFKEEIESI---EMEVDWKNLLQTYLQKEGKK-PQYIVSR 189 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD+ F + + + G G ++R+AE AA++AL+K++ + Sbjct: 190 EVGPEHDKTFYVELWIDD-EKISEGEGKNKREAEIKAAQKALEKIKND 236 >UniRef50_D0LWB5 Ribonuclease III n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWB5_HALO1 Length = 282 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 83/217 (38%), Positives = 119/217 (54%), Gaps = 8/217 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALY 57 I ++ L+ LG+ F + LL+ A+THRS +++ NERLEFLGD++L + + L Sbjct: 43 IDLSGLEDILGHRFRKRALLEAAVTHRSFANEQAVPCTDNERLEFLGDAVLDLAVGHMLM 102 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 P + EG +S RA +V L+E+A LG LRLG GE +SGG + SILAD++E Sbjct: 103 DVHPDLSEGRLSVTRAQIVSEKGLSEIAYGLGLGTYLRLGKGERRSGGQNKASILADSLE 162 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+I V+LD KL+ + L+E+ D KTRLQE Q R P Y VV Sbjct: 163 AVIAAVYLDGGFDAAWKLVARLFARTLEEVEISG-FYDHKTRLQELAQARLKSTPAYRVV 221 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQA 214 G H + F + ++ G E GSS+++AEQ Sbjct: 222 DETGPDHAKLFEVVAEIDG-REWGRAIGSSKKRAEQM 257 >UniRef50_Q0APC4 Ribonuclease III n=2 Tax=Hyphomonadaceae RepID=Q0APC4_MARMM Length = 228 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 80/223 (35%), Positives = 125/223 (56%), Gaps = 8/223 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHR 59 I RL++++GY F + L+++ALTH S + ERLEFLGD +L + A AL+ Sbjct: 4 PIARLEQRIGYVFTDKRLIERALTHGSFAEGRKTIPTYERLEFLGDRVLGLMTAEALFKS 63 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 F + DEG ++ ++VR T A++AR +LG LR+G E K GG + SIL D E+L Sbjct: 64 FDKADEGALAPRLNSMVRKETCADVARAVDLGAALRIGKSEEKGGGRNKTSILGDACESL 123 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 + ++LD V+ + + R++ + K D K+ LQE+ +P Y + + Sbjct: 124 MAAIYLDGGRAAVQAFFDHHWGPRIE--ALKAKPLDAKSALQEWAAKTGRGVPRYELTER 181 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G H FT+ V+ L+ P VG G S++ AE+AAAE+ LK+ Sbjct: 182 SGPDHRPVFTVQVTVTPLA-PAVGEGGSKQVAERAAAEELLKR 223 >UniRef50_A5CEW8 Ribonuclease III n=2 Tax=Orientia tsutsugamushi RepID=A5CEW8_ORITB Length = 251 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 130/225 (57%), Gaps = 6/225 (2%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANAL 56 ++ ++ LQ ++GY FN +LL +ALTH S + +K+ +RLEFLGD IL+ VI+ L Sbjct: 19 VDYTKLDALQSEIGYNFNSIDLLIEALTHPSINQYGYTKNYQRLEFLGDVILNLVISETL 78 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + F +EG +++ RA LV ++ +A++ L + + + E K GG ++ + +T+ Sbjct: 79 FKNFSHYNEGKLAKSRAFLVCNESICLIAQKINLHKYIIMTANEEKCGGRSNKNNIENTM 138 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+IG V+LD I ++ ++ + ++ + + DPK+ LQE+ Q ++ +PTY + Sbjct: 139 EAVIGAVYLDGGIHVIKDIVNSLWKVLIKDHELY-LIADPKSALQEWSQSKNFGIPTYTL 197 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 G++H F + +V G EP G G++ + A++ AA+ L Sbjct: 198 SSKTGQSHSPLFEVMVKV-GRLEPQYGKGTTIKTAQKNAAQLMLS 241 >UniRef50_B9XI61 Ribonuclease III n=1 Tax=bacterium Ellin514 RepID=B9XI61_9BACT Length = 231 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 116/212 (54%), Gaps = 7/212 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALY 57 +N LQ LGY F ELLQ ALTH S + + HN+RLEFLGD++L V+ + LY Sbjct: 2 PDLNNLQTALGYAFRKIELLQLALTHPSVAHEQRTPVQHNQRLEFLGDAVLQLVLTHELY 61 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +FP EG +++ RA LV LAE R LG L L GE GG R S LADT E Sbjct: 62 SKFPDFGEGPLTKARAKLVNRRALAEQGRALNLGAHLILSRGEEAHGGRLRPSALADTFE 121 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 AL+G +FLD + VEK +L + L EIS ++PK LQE LQ + P Y VV Sbjct: 122 ALLGAIFLDGGFEAVEKFLLARFHDMLAEISALPALENPKGELQELLQAKSSEAPQYNVV 181 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G HD+ F Q +G+ E G G S++ Sbjct: 182 STSGPDHDRVFECIVQHNGV-ELAHGRGKSKK 212 >UniRef50_Q8CPI1 Ribonuclease 3 n=63 Tax=Staphylococcaceae RepID=RNC_STAES Length = 245 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 124/224 (55%), Gaps = 9/224 (4%) Query: 10 QRKLGYTFNHQELLQQALTHRSASS-------KHNERLEFLGDSILSYVIANALYHRFPR 62 + LG F + +L QQA +H S + +HNERLEFLGD++L ++ L+ R P Sbjct: 21 MKSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPH 80 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EG++++MRAT+V +L A + +L E + LG GE K+GG R S+++D EA +G Sbjct: 81 LPEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGA 140 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 ++LD + +V +++ D KT+ QEY+ ++ TY +++ G Sbjct: 141 LYLDQGLDSVWTFAEKVIFPYVEDDELVG-VVDFKTQFQEYVHSQNKGDVTYQLIKEEGP 199 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 AH + FT + + G G +++++EQ AAEQA K ++ + Sbjct: 200 AHHRLFTSEVILENKA-VAEGKGKTKKESEQKAAEQAYKLMKNK 242 >UniRef50_C5QRI2 Ribonuclease III n=2 Tax=Staphylococcus RepID=C5QRI2_STAEP Length = 248 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 124/218 (56%), Gaps = 9/218 (4%) Query: 14 GYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRVDEG 66 G++FN+ +L QQA +H S + HNERLEFLGD++L ++ L+ + P + EG Sbjct: 25 GFSFNNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPHLPEG 84 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++++MRAT+V +L A + +L E + LG GE K+GG R S+++D EA +G ++LD Sbjct: 85 NLTKMRATIVCEPSLVIFANKIDLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLD 144 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 ++TV +++ D KT+ QE++ ++ TY +++ G AH + Sbjct: 145 QGLETVWAFAEKVIFPYVEDNELVG-VVDFKTQFQEFVHRQNKGDVTYRLIKEEGPAHHR 203 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 FT + + G G +++++EQ AAEQA K ++ Sbjct: 204 LFTSEVILENKA-VAEGKGKTKKESEQKAAEQAYKSMK 240 >UniRef50_C2KW20 Ribonuclease III n=1 Tax=Oribacterium sinus F0268 RepID=C2KW20_9FIRM Length = 241 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 86/230 (37%), Positives = 135/230 (58%), Gaps = 12/230 (5%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANAL 56 +++L+ LGY F Q+LL ALTH S S++ N+RLEFLGD++L V + L Sbjct: 9 PSLSKLEEDLGYHFQDQKLLLHALTHPSYSNEMGHPKEASNQRLEFLGDAVLELVSSTLL 68 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 YH+ P + EG M+++RA LV + LA +A+ +L L LG GE + G R+S+L+D + Sbjct: 69 YHKKPVIQEGRMTKLRAALVCESALAVVAKSLQLSSYLLLGKGEEREGIQFRDSVLSDAL 128 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+IG ++LD ++ E + L +I +D KT LQEY + PL Y + Sbjct: 129 EAVIGAIYLDGGMKKAECFVR---GKVLSDIEHKTLFQDAKTMLQEYCTAKRYPL-EYDL 184 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 ++ G H + + + +V+ +G GSS++KAEQAAA AL+K+++E Sbjct: 185 LEESGPFHQRFYKVSVKVN-EEVYGIGEGSSKKKAEQAAAYFALEKIKVE 233 >UniRef50_O69161 Ribonuclease 3 n=2 Tax=Alphaproteobacteria RepID=RNC_BRAJA Length = 250 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 9/222 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASS------KHNERLEFLGDSILSYVIANALYHRF 60 L+ ++G++F LL Q +TH SA +RLEFLGD +L V+++ LYH F Sbjct: 23 AALEARIGHSFADPNLLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAF 82 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P DEG++S+ A LVR + A++A+ L + ++LG + R+S+L D EA+I Sbjct: 83 PNADEGELSKRLAELVRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVI 142 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G +FLD + + + R+ P +DPKT LQE+ QG+ LP P Y V+ Sbjct: 143 GAIFLDGGHAAAAEFVKRNWTERM--HKPRRPLRDPKTVLQEWAQGKGLPTPVYREVERT 200 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G HD +F + + GL+ P G G S+R AE+ AA +++ Sbjct: 201 GPHHDPQFRVAVDLPGLA-PAEGIGGSKRAAEKVAASVMIER 241 >UniRef50_A5IN74 Ribonuclease 3 n=8 Tax=Thermotogaceae RepID=RNC_THEP1 Length = 240 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 79/229 (34%), Positives = 130/229 (56%), Gaps = 11/229 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK----------HNERLEFLGDSILSYVIAN 54 ++ Q+K G F ++ELL +AL H S +++ NE+LEFLGD++L + Sbjct: 8 IVEEFQKKTGINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVCE 67 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY ++P + GD++R ++ LA ++RE LG+ L LG GE K+GG R+SILAD Sbjct: 68 ILYKKYPEAEVGDLARAKSAAASEEVLAMVSRELNLGKFLFLGKGEEKTGGRDRDSILAD 127 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 EAL+ ++LD +++L ++ +++I G+ D KT LQE +Q H P Y Sbjct: 128 AFEALLAAIYLDQGYHKIKELFEEEFELYIEKIMRGEMLFDYKTALQEIVQSEHKVPPEY 187 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 ++V+ D+ F + +V G S +G G ++++AE+ AA A +KL Sbjct: 188 VLVRTEKNDGDRIFVVEVRVDGKS-IAMGRGRTKKEAEKEAARIAYEKL 235 >UniRef50_C4FT63 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT63_9FIRM Length = 247 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 80/219 (36%), Positives = 126/219 (57%), Gaps = 9/219 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYH 58 I ++++L TF EL+QQA H S +++ H ERLEFLGD++L + + LYH Sbjct: 7 IRVIEKQLNLTFKKPELIQQAFRHTSYANEQARRHLPHYERLEFLGDAVLELLSSEFLYH 66 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +P + EG ++RMRA +V+ +LA LAR+ + + L+LG GE SGG R+SILAD EA Sbjct: 67 SYPNLPEGKLTRMRAQIVQEKSLAYLARQLKFNQFLQLGKGEELSGGRERDSILADCFEA 126 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G ++ D ++ + + ++ ++ G +D KT QE +Q + Y + Sbjct: 127 VLGAIYEDQGLEVAKDYLNRVMFSQ-HQLLLGRVTQDHKTLFQERVQKQGTVQIDYRLKD 185 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 +G AHDQ FT+ V+ G GSS+++AE AAE Sbjct: 186 KQGPAHDQIFTVELYVND-QHIATGQGSSKKQAEMQAAE 223 >UniRef50_C0QYN3 Ribonuclease III n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QYN3_BRAHW Length = 243 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 79/227 (34%), Positives = 137/227 (60%), Gaps = 8/227 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYH 58 ++N Q L Y F +++ L +A+THR+ +++ N+RLEFLGDS+LS +I++ L+ Sbjct: 6 ILNNCQTALKYEFRNKDHLLEAITHRTYANESKKKMKYNQRLEFLGDSVLSLIISDYLFK 65 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++ EG +S+++++LV +LA++++E +LG+ L LG GE SGG R+++L D EA Sbjct: 66 KYSSSKEGLLSKVKSSLVSQKSLADISKELKLGDFLLLGHGEEASGGRYRDNMLEDLFEA 125 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G ++LDS I + K ++ Y+ RL + + KD KT QE +Q +H P Y + Sbjct: 126 IVGAIYLDSGITSASKFVMRAYKERLKNLDIENFDKDYKTIFQELIQKKHKTSPIYKSYE 185 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 H+ F V+ +G G S+++AE AA++AL K+E+ Sbjct: 186 YYDNNHE-MFKSEVYVND-KNFALGVGKSKKEAETNAAKKALDKIEM 230 >UniRef50_C8PUU2 Ribonuclease III n=4 Tax=Gammaproteobacteria RepID=C8PUU2_9GAMM Length = 275 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 101/232 (43%), Positives = 139/232 (59%), Gaps = 14/232 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVD 64 + L ++GY F++ L AL HRS S+HN ERLEFLGD++L +IA AL+ R+P + Sbjct: 36 LTALFYQMGYQFDNVNLPIMALMHRSFDSEHNYERLEFLGDALLGVIIAEALFLRYPDYN 95 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG +SR+RA+LVR TL +A++ L + L LG GE K GG +R SILAD+VEALIG ++ Sbjct: 96 EGRLSRLRASLVREETLVIIAKQLNLSDYLILGVGERKGGGRQRASILADSVEALIGAIY 155 Query: 125 LDS-DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 LDS + TV+ +L W++ +++ KD K+RLQE LQ L LP Y V + G A Sbjct: 156 LDSQNFDTVKACVLAWFEDLFEKVKEQKVLKDAKSRLQELLQAHQLALPRYEVTETIGNA 215 Query: 184 HDQEFTIHCQVSGLSE------------PVVGTGSSRRKAEQAAAEQALKKL 223 +Q F + CQV + + V G SRR AEQ AE L K+ Sbjct: 216 PNQIFVVSCQVEIIFDNKTAKPIAPTQALVTAQGESRRIAEQRCAEAMLAKI 267 >UniRef50_D1CFY1 Ribonuclease III n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFY1_THET1 Length = 234 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 89/224 (39%), Positives = 128/224 (57%), Gaps = 10/224 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHRFPR 62 LQ +LGY F + ELL+ ALTHRS +++ NER EFLGDSIL++V+ AL+ FPR Sbjct: 10 LQERLGYKFRNIELLKTALTHRSFANESLEKTETNERFEFLGDSILAFVVGEALFRLFPR 69 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG ++R RA LV LA+++R +G+ + LG G SG + ES+LAD +EALI Sbjct: 70 ASEGILTRARAHLVGRKNLADISRTLGIGDFILLGKGARLSGSSQSESVLADALEALIAA 129 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 V+LDSD++T ++ + +EI KD KTRLQE + P Y V+ Sbjct: 130 VYLDSDLETCRSVVFRLLRLSKEEIEHWLDVKDNKTRLQELSHRLYRTNPIYTVIAA--P 187 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 F + +V+ +S G G S+ +AEQ AA +AL + + Sbjct: 188 PVRDNFIVQVKVNDVS--AQGEGRSKSEAEQEAARKALDVFDFK 229 >UniRef50_C1ZAX4 RNAse III n=2 Tax=Planctomycetaceae RepID=C1ZAX4_PLALI Length = 263 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 123/226 (54%), Gaps = 5/226 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALYHRF 60 + + + +LGY F ELL QAL+H SA+ + NERLEFLGD+IL + + L+ ++ Sbjct: 8 VPLTECEARLGYHFRSPELLMQALSHASAAKTRLESNERLEFLGDAILGAAVCDLLFRKY 67 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P+ EG+++R+++ +V + LA+E L + + +G G L SIL+ T E++I Sbjct: 68 PKSTEGELTRIKSFVVSRHVCGLLAKELHLDQFVIIGKG-LCGTPNVPVSILSATFESVI 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 VFLD ++ I+ + ++++ + ++ K+ LQ+Y Q P Y +++ Sbjct: 127 AAVFLDGGFDAAKEFIIRLIEPHVEQMVGAEYGRNYKSVLQQYAQKTLGETPRYDLLKEY 186 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G H + F + + G G ++++AEQ AA AL +LE + Sbjct: 187 GPDHLKYFKVSAAL-GEVVYAAAWGINKKEAEQKAAANALSELEGK 231 >UniRef50_Q7UGZ7 Ribonuclease 3 n=1 Tax=Rhodopirellula baltica RepID=RNC_RHOBA Length = 266 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 5/221 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPR 62 I R Q LGY F +LL+ ALTH S +S NERLEFLGDS+L + L++ +P Sbjct: 34 IERCQEILGYDFRDLDLLRSALTHASGASHRLASNERLEFLGDSVLGLTVCEWLFNEYPE 93 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EGD++++++ +V + ++A + L +CL +G G ++ + + S+++D EA+I Sbjct: 94 YSEGDLTKIKSAVVSRRSCGKVACKLGLDQCLIVGRGVTRNRSYPK-SLVSDVFEAVIAA 152 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +++D + V + W ++ + K+ LQ++ Q P Y +++ G Sbjct: 153 LYIDGGPEIVRDRLKLWLAEEVNLAVDTQGSGNHKSVLQQFAQRELSATPVYKLIRETGP 212 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H + F + V G++++ AEQ AA AL +L Sbjct: 213 DHRKMFLMGAMVDD-RRFAPAWGNNKKDAEQRAAANALAEL 252 >UniRef50_A6C1C3 Ribonuclease III n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1C3_9PLAN Length = 247 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 79/233 (33%), Positives = 126/233 (54%), Gaps = 9/233 (3%) Query: 1 MNPIVINRL----QRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIA 53 ++P+ I++L Q+ LGY F ELL+ LTH SA+ NERLEFLGD+IL ++ Sbjct: 5 LSPVEIDQLLEECQQNLGYRFVDCELLKSCLTHTSAAKTRMDSNERLEFLGDAILGSIVC 64 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 L+ +FP EG+++R+++ +V NT LARE L + +G G + ES+LA Sbjct: 65 EKLFDQFPNAPEGELTRIKSAVVSRNTCTRLAREKGLDRFIFVGKGLAMTENL-PESLLA 123 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 EALI G++LD I V + + + + S + K+ LQ+Y Q + P Sbjct: 124 GMFEALIAGIYLDGGIAPVHQFLDPLIERENSKASRSVHGYNYKSLLQQYSQKKFSQTPI 183 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y V+ +G H + F + + G + GS++++AEQ AA AL++ E + Sbjct: 184 YEVLDEKGPDHSKFFKVTAII-GEHKYEPAWGSTKKEAEQRAAYNALRENEDD 235 >UniRef50_A8GM79 Ribonuclease 3 n=6 Tax=Rickettsia RepID=RNC_RICAH Length = 227 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 75/226 (33%), Positives = 125/226 (55%), Gaps = 11/226 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 L++ LGY+F +QELL +AL+H S H ERLEFLGD++L+ V+ L+ Sbjct: 4 FETLEKLLGYSFKNQELLIEALSHPSLRQHHEYKYDKDYERLEFLGDAVLNLVVTEILFR 63 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 F +EG+++++R+ LV T+ + + L + + + GE +GG + + + +EA Sbjct: 64 NFASYNEGNLAKIRSYLVCKETICVVGTKLTLKDYIIMTYGEEVAGGRDNPNNIENAMEA 123 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LI ++LDS+I+T +I ++ + + D DPKT LQE+ Q LP Y +++ Sbjct: 124 LIAAIYLDSNIETTRNIIGKLWEEFIKIQNLTD--YDPKTALQEWAQASSHHLPIYRLIK 181 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G AH FT+ +V + GTG S ++AE+ AA L +L+ Sbjct: 182 REGAAHSSTFTVLVKVKDYEQ--TGTGHSIKEAEKNAARDLLHRLQ 225 >UniRef50_Q027L3 Ribonuclease 3 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RNC_SOLUE Length = 271 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 82/233 (35%), Positives = 122/233 (52%), Gaps = 19/233 (8%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH------------NERLEFLGDSILSYVIANAL 56 L+ KL Y FN ELL++ALTH S ++++ NE+LEFLGDS+L ++IA AL Sbjct: 8 LELKLDYRFNDPELLRRALTHSSLANENRPGAGVGSPLNDNEQLEFLGDSVLGFLIAEAL 67 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 RFP EGD+SR++A LV L +AR +LG L LG E SGG ++++L D + Sbjct: 68 VRRFPEYHEGDLSRLKAHLVSAAHLHGVARRLDLGSYLELGRSEEMSGGRTKKTLLVDGL 127 Query: 117 EALIGGVFLDSDIQTVEKLI------LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP 170 EA++ ++LD + + ++ + K+ LQE Q R LP Sbjct: 128 EAIMAAIYLDGGVDAARAFVATHVLDAPFFGDEEAGTDIQPAITNFKSALQELAQTRRLP 187 Query: 171 LPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 P Y VV+ RG H + FT+ +V G G +++ A Q AA ++L Sbjct: 188 QPRYSVVRERGPEHSKTFTVEVRV-GKEWTAQAEGRTKKIAAQRAARGLYERL 239 >UniRef50_C7LRK0 Ribonuclease III n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRK0_DESBD Length = 242 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 125/224 (55%), Gaps = 5/224 (2%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHRF 60 + LQ ++ Y F +LL QALTH S +++H NERLEFLGD++L ++ L+ +F Sbjct: 9 ALQALQNEIHYEFKQVKLLIQALTHSSHANEHGCPHNERLEFLGDAVLELAVSQELFRKF 68 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P V EG +++MR+ LV LA+ AR LG CL LG GE GG + S+L+D +EA++ Sbjct: 69 PEVQEGHLTKMRSALVSEGALAQAARRIHLGACLLLGRGEDVQGGREKNSVLSDALEAVL 128 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G V+LD ++ + Y + + +D K+ LQE Q P+Y + + Sbjct: 129 GAVYLDGGLERAITCVNFLYAGQWPTPPETFRPRDFKSLLQEATQRIWKARPSYALRESH 188 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H +++T+ + +E V S RKAEQ AAEQAL +L Sbjct: 189 GPEHAKQYTVVVTMPDKTE-VECEERSMRKAEQGAAEQALVQLR 231 >UniRef50_B1H0Q0 Ribonuclease III n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0Q0_UNCTG Length = 243 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 79/225 (35%), Positives = 129/225 (57%), Gaps = 11/225 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFP 61 + Q+ + Y F ++L ALTH+S +++ +N R+EFLGDSILS ++A LY R+P Sbjct: 7 EKFQKIIEYKFGDPKILATALTHKSYAAETVGENYNRRMEFLGDSILSAIVAETLYLRYP 66 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 R EG +S+ +A ++ + L+ ARE +LG C+ LG E +RES+L D EA+IG Sbjct: 67 RESEGKLSQFKAQIISAHNLSSWAREMDLGGCIYLGKSEDTKEARQRESLLCDVFEAVIG 126 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD + +K +L + + D K+RLQE LQ + LP Y V++ G Sbjct: 127 AIYLDGGFENAKKFVLRFL-----NDQKEIEITDYKSRLQEILQSIYKELPEYKVIKESG 181 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H+++F + + G G+S+++A+Q AA+QA+K + E Sbjct: 182 PDHNKKFEVAVYIK-SELLGKGAGNSKKEAQQFAAKQAMKNIRAE 225 >UniRef50_Q8RGX3 Ribonuclease 3 n=10 Tax=Fusobacterium RepID=RNC_FUSNN Length = 234 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 82/225 (36%), Positives = 129/225 (57%), Gaps = 9/225 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALYHRFP 61 L+ KL Y FN + LL+ AL H+S ++ NERLE LGD++L ++A LY + Sbjct: 7 LEHKLNYYFNDRNLLKNALLHKSLGNERKEYKNQTNERLELLGDAVLDLIVAEYLYKSYK 66 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG +++++A +V LA+++R+ +G+ L L GE+ SGG RESILAD+ EA++G Sbjct: 67 NASEGPIAKLKAMIVSEPILAKISRQIGVGKFLMLSRGEVMSGGRNRESILADSFEAILG 126 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V++DS++ L+ + +D I + D K+ LQEY+Q +PTY +V RG Sbjct: 127 AVYIDSNLDEARVFALSHIKQYIDHIEENEDILDFKSILQEYVQKEFKTVPTYELVAERG 186 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H +EF I V E V +++KAEQ +A+ KL ++ Sbjct: 187 PDHMKEFEIQVIVGNYKEKAVA--RNKKKAEQLSAKALCIKLGVK 229 >UniRef50_B4U7T8 Ribonuclease 3 n=3 Tax=Aquificaceae RepID=RNC_HYDS0 Length = 232 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 120/224 (53%), Gaps = 7/224 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS--SKHNERLEFLGDSILSYVIANALYHRFPRV 63 L+ K+GY F + L+++A TH S S S++ E LEFLGD++++++ N L FP Sbjct: 4 FELLEEKIGYRFKDKNLVKKAFTHISFSKSSENYEVLEFLGDALVNFMTVNILVEAFPNK 63 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG++S++++ L+ LA LA+ + + + GE G + SIL D EA + Sbjct: 64 KEGELSQLKSFLISEEFLASLAKSLNFEKYILISKGEELKGSNKNPSILCDVFEAFWAAI 123 Query: 124 FLDSDIQ--TVEKLILNWYQTRLDEISPGDKQK-DPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++DS + L + +++++ E+ + K D KT LQE Q + P Y V+ V Sbjct: 124 YIDSGYDCKLTKSLFEHHFKSQILEMVNSNSLKQDYKTALQEITQKKWKERPIYNVISVE 183 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H + FT+ C L G G+S++ AEQ AA+ L+ ++ Sbjct: 184 GPEHRKTFTVECLFKDLR--TTGKGNSKKYAEQEAAKNMLQIIQ 225 >UniRef50_D1N9T0 Ribonuclease III n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9T0_9BACT Length = 232 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 7/224 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHR 59 I L+++LG+ L +A+THRS + ++N +RLEFLGD++L ++ L+H Sbjct: 4 NIEELKKRLGFAGPWSNRLAEAVTHRSYAVENNLGYDNQRLEFLGDAVLEIILTEYLFHL 63 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P EG+M+++R+ LVR LA LAR FELGE L G GE SGG R+S LAD EA+ Sbjct: 64 YPDAAEGEMTKIRSALVREPALARLARRFELGEYLLTGRGEHDSGGADRDSTLADLFEAV 123 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G +LD+ + + + + +PK +LQEY Q P Y ++ Sbjct: 124 LGAFYLDAGFDATRQFVTGLIRDEYPDPRSLLTSINPKGQLQEYSQRHWGLTPKYSILHT 183 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + + ++S VG ++R+ AE AA Q + L Sbjct: 184 SGPEHLPVYEVEVRLS--RYNAVGRAANRKAAEGDAARQLYRYL 225 >UniRef50_Q6MEK1 Ribonuclease 3 n=2 Tax=Parachlamydiaceae RepID=RNC_PARUW Length = 242 Score = 225 bits (574), Expect = 9e-58, Method: Composition-based stats. Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 13/221 (5%) Query: 1 MNPI--VINR---LQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILS 49 MNPI VI + ++ KLGYTF +LL A HRS ++ HNERLEFLGDS+L Sbjct: 8 MNPIEHVIRQAPAIEAKLGYTFKDPQLLVLAFVHRSFINENREVNQHNERLEFLGDSVLG 67 Query: 50 YVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRE 109 +I++ LY + P+ EG +S +R+ LV ++ + +L L LG GE + G RE Sbjct: 68 MLISDYLYCKLPKTPEGQLSYLRSRLVEASSCVHYIQSLDLSGYLLLGKGERMNDGRGRE 127 Query: 110 SILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHL 169 SILAD EA+IG ++LD +Q + + + + EI ++ K LQ+Y Q + Sbjct: 128 SILADLFEAIIGAIYLDGGLQAAKDFLFKNFHQHI-EIILATPLRNWKALLQDYCQKNYQ 186 Query: 170 PLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 P Y V+ G H + F I + E G G+S+++ Sbjct: 187 QTPLYQVLHESGPDHSKVFQISVWIQD-RELGRGKGTSKKE 226 >UniRef50_B1ZYU8 Ribonuclease III n=2 Tax=Opitutaceae RepID=B1ZYU8_OPITP Length = 250 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 87/232 (37%), Positives = 128/232 (55%), Gaps = 8/232 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANA 55 +P + LQ +L YTF LL++A+TH S ++ N+RLEFLGD++L ++ A Sbjct: 20 SPSPLAALQTRLIYTFRDPALLERAVTHTSYLPENPDIAESNQRLEFLGDAVLQLILTEA 79 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ FP EG +SR RA L +G L ELARE +L CL LG E SGG R S L D Sbjct: 80 LFELFPGDREGPLSRRRAALTKGAFLVELARELQLDRCLLLGSSEEASGGRTRSSALEDA 139 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHL-PLPTY 174 EAL+G ++LDSD+ +++L Y +S +++PK RLQE +Q + Y Sbjct: 140 FEALVGALYLDSDLALTRRIVLGLYGDLPSRLSGVVNEENPKGRLQELIQPEYGNQALRY 199 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 V + GE H + + + + G G S++ AE+AAA AL+ L+ + Sbjct: 200 EVTGIEGEDHARAYEVAVFLHD-RVLGSGRGPSKKLAEEAAARVALETLKAQ 250 >UniRef50_A1APX0 Ribonuclease III n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1APX0_PELPD Length = 234 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 115/211 (54%), Gaps = 6/211 (2%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHR 59 + L+R++ Y F Q L QALTH S + + +RLEFLGD++L V+A L+ R Sbjct: 4 DLAELEREIAYRFIDQAPLLQALTHPSFEHEQAGGGNYQRLEFLGDAVLGMVLAEMLFRR 63 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP +EG +SR+R+ + +TLA +AR F LG +RLG GE + G ++SILAD +EAL Sbjct: 64 FPDSNEGVLSRLRSQIADQDTLAGIARSFGLGRFVRLGRGEEQGAGRNKDSILADVLEAL 123 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 I V+LD ++ +LI + L+ + D K+ LQE L R LP P Y + Sbjct: 124 IAAVYLDGGLKESRRLIQRLFVAILESRGARLRFNDAKSELQELLSARRLPSPVYRLTGE 183 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 G HD+ F V + G G S++ Sbjct: 184 SGPPHDRLFIFQVLVDD-AVVGEGEGRSKKI 213 >UniRef50_Q1D5X9 Ribonuclease 3 n=1 Tax=Myxococcus xanthus DK 1622 RepID=RNC_MYXXD Length = 260 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 88/234 (37%), Positives = 135/234 (57%), Gaps = 9/234 (3%) Query: 1 MNPIV-INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVI 52 M+P + L+ +LG +F+ E +ALTH++ ++ N+RLEFLGDS+++ + Sbjct: 10 MSPSERVQLLESRLGLSFSRMETALEALTHKTYVNETRDKELKDNQRLEFLGDSVVNLAV 69 Query: 53 ANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESIL 112 ++ L R P + EGD+++MRA +V + LA +AR LG+ L LG GEL SGG + S+L Sbjct: 70 SHRLMARCPGLPEGDLTKMRARVVNEDGLARVARTIPLGDLLLLGRGELMSGGREKNSVL 129 Query: 113 ADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLP 172 AD +EA+ G VFL S + L+ ++ LDE+S G + D KT LQE R P Sbjct: 130 ADALEAVFGAVFLTSGLDAAVTLVDRYFADLLDEVSSGQGRLDYKTLLQEMAHERLKLQP 189 Query: 173 TYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y VV G H + F + + G + TG S+++AEQ+AA+ L+KL + Sbjct: 190 RYRVVSESGPEHSKVFEVELML-GETAFARATGRSKKEAEQSAAQATLEKLRED 242 >UniRef50_Q2S2W4 Ribonuclease III n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2W4_SALRD Length = 248 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 11/230 (4%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIA 53 ++P I +L +G + ++ALTHRS + + NERLEFLGD++L + Sbjct: 16 VDPAAIEQL---VGRPVDDLSHYRRALTHRSLLRVHPARTFRSNERLEFLGDALLDVFVG 72 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 LY RFP DEG ++R+RA LV LA AR LG L + + G SILA Sbjct: 73 EVLYDRFPEKDEGALTRLRARLVSERPLATYARGLGLGPHLLMSENAAEGDGRDNPSILA 132 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA +G V+LD + + + +D + + K++L E+LQ P PT Sbjct: 133 DAFEAFVGAVYLDLGHEAARGFVQDRVLAPVDLEDVATRDDNYKSQLLEHLQALGRPQPT 192 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 Y VV+ +G +HD+ FT+ +V + GT S++ AEQ AA + L ++ Sbjct: 193 YHVVEEKGPSHDKTFTVEVRVGDAAYE-RGTAGSKQDAEQQAARRTLDEM 241 >UniRef50_C3P5Q0 Ribonuclease 3 n=173 Tax=cellular organisms RepID=RNC_BACAA Length = 245 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 118/208 (56%), Gaps = 9/208 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 Q K+G TF ++LL QA TH S ++H NERLEFLGD++L ++ L+ ++P Sbjct: 22 FQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYP 81 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG+++++RA +V +L A E G + LG GE +GG R ++LAD EA IG Sbjct: 82 TMSEGELTKLRAAIVCEPSLVRFANELSFGSLVLLGKGEEMTGGRERPALLADVFEAFIG 141 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD ++TV + +++E + D K++LQE +Q Y ++Q +G Sbjct: 142 ALYLDQGLETVWGFLKEIVYPKINEGAFS-HVMDYKSQLQELIQRDGSGNIEYQILQEKG 200 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 AH++EF ++ ++ +G+G S++ Sbjct: 201 PAHNREFVSRVTLNNVA-LGLGSGKSKK 227 >UniRef50_C1SM31 Ribonuclease III n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM31_9BACT Length = 209 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 6/208 (2%) Query: 24 QQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 +ALTHRS + + + ERLEFLGD++L ++ L R+ DEG +S++R V Sbjct: 2 LEALTHRSYAHEKKNKQNYERLEFLGDAVLQLIVTEYLLDRYKDYDEGLLSKLRGYFVSE 61 Query: 79 NTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILN 138 L+ +A E +LGE + LG GE SGG +ES+L D E+++ ++LD +I+ Sbjct: 62 GFLSRIAIELKLGEHILLGKGEKASGGKYKESLLCDIFESVVAAIYLDGGYGFARDIIIR 121 Query: 139 WYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLS 198 + +R+DE D K+ LQ+ Q + LP Y V+ +G HD+ F + V Sbjct: 122 HFGSRIDEDISNSSFVDAKSELQKISQRKFGTLPDYTVLDEKGPEHDKIFVVRVDVE-TL 180 Query: 199 EPVVGTGSSRRKAEQAAAEQALKKLELE 226 G G +++ AE+ AA+ AL+KL E Sbjct: 181 VSEQGIGKTKKSAEKDAAKNALRKLGNE 208 >UniRef50_Q1JXG8 Ribonuclease III n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXG8_DESAC Length = 244 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 9/209 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYH 58 +++ + +LGY F + LQ AL H+S +++ NER EFLGD++L V+A+ L+ Sbjct: 13 LSQFEERLGYRFTDRHYLQTALIHKSYANEQLRDPAACNERQEFLGDAVLDLVMADYLFC 72 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +P++ EG++SR+R+ LV LA++AR LG CL+LG GE +SGG ++++LAD +EA Sbjct: 73 TYPQLPEGELSRIRSELVSARALAKVARRLNLGPCLKLGRGERRSGGQDKDNLLADALEA 132 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 + G VFLD+ ++ ++ + + K D KTR QE Q R P Y +V Sbjct: 133 VFGAVFLDAGWDVARDVLGRMFEGTAVQ-AARRKSLDYKTRFQELAQARFGAAPEYELVA 191 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 G H +E+T+ G G+G S Sbjct: 192 TEGPDHQREYTVIVSCEG-RHLGQGSGGS 219 >UniRef50_Q0BTG2 Ribonuclease III n=12 Tax=Rhodospirillales RepID=Q0BTG2_GRABC Length = 258 Score = 223 bits (568), Expect = 5e-57, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 120/233 (51%), Gaps = 18/233 (7%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA--------------SSKHNERLEFLGDSILSYV 51 + + L + F ++LL +ALTHRSA + NERLEF+GD +L V Sbjct: 19 LEAAEALLSHRFARRDLLAEALTHRSAVKIMHGQTGQSLPRGAGSNERLEFVGDRVLGLV 78 Query: 52 IANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESI 111 +A L RFP EG++ R A LV LA +A + L + L + PGE K+G + ++ Sbjct: 79 VAEWLVERFPLEQEGELGRRLAHLVSQPVLAGIAEQSGLPQILSVAPGEAKAGVRKLATV 138 Query: 112 LADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL 171 L+D +EALIG ++LD+ + V + I ++ + + KD KT LQE+ QG L L Sbjct: 139 LSDAMEALIGALYLDAGLDPVRQFIRRHWEPVMQRQTE--PPKDAKTALQEWAQGLGLHL 196 Query: 172 PTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 PTY + + G H+ F + V G S+R AEQ AA+ L ++ Sbjct: 197 PTYRLARREGPPHNPVFWVEVLVGDH--VGQGQAGSKRAAEQLAAQDLLGRIR 247 >UniRef50_Q73NX5 Ribonuclease 3 n=2 Tax=Treponema RepID=RNC_TREDE Length = 246 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 123/222 (55%), Gaps = 7/222 (3%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKHN------ERLEFLGDSILSYVIANALYHRFP 61 Q++ G F LL A HRS S++HN ERLEFLGDS+L V A+ LY F Sbjct: 18 EFQKQAGLKFKDLRLLDLAFHHRSFSNEHNNFHANNERLEFLGDSVLGLVAASYLYKSFE 77 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG++++++A+ V + L++ A + + L LG GE SGG +++ILAD +EA+IG Sbjct: 78 DRPEGELAKIKASAVSEDALSKTASKLNISNYLVLGRGEEMSGGREKKAILADALEAVIG 137 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++DS + +K +L ++ + + D K+ LQE +Q + +P Y + + G Sbjct: 138 AYYIDSGFKAAQKFVLRLLESTIHSVLEKKFISDYKSLLQELVQKKFKTVPKYELKKASG 197 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 HD+ F ++G + +G ++++AEQ+ A+ A + L Sbjct: 198 PDHDRTFWFSVSINGKVYGPL-SGKTKKEAEQSVAKVAYENL 238 >UniRef50_B5YDQ5 Ribonuclease III n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDQ5_DICT6 Length = 237 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 127/226 (56%), Gaps = 11/226 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYH 58 ++++++ K G +F+++ L+ +ALTH S ++ N+RLEFLGD++L+ +I L+ Sbjct: 16 ILSKVKEKTGISFDNKNLIIEALTHPSFKHENPHFEYDNQRLEFLGDAVLNMIITEILFQ 75 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 R+ EG +++ R +V+ TL + A+ LG+ + LG GE K GG + SIL+D EA Sbjct: 76 RYKEASEGILTQKRIYMVKEETLYKKAKSLNLGDLILLGKGEEKQGGREKISILSDLFEA 135 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 IG ++LD + + + ++ ++ + + + D K LQ L P+Y+V + Sbjct: 136 FIGALYLDKGYEFTKNFVERIFREEIESV---EMEIDWKNLLQSQLMKEGKK-PSYIVTR 191 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H++ F + + ++ G G ++R+AE AA+ AL+K+ Sbjct: 192 EEGPEHNKIFYVELWIDN-NKIAEGEGKTKREAEIKAAKIALEKMR 236 >UniRef50_A4XJW5 Ribonuclease III n=2 Tax=Clostridia RepID=A4XJW5_CALS8 Length = 224 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 127/221 (57%), Gaps = 5/221 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPR 62 + +++KLGY F + LL+ ALTH+SA+ ERLEFLGD++L V++ L+ FP+ Sbjct: 1 MTDIEKKLGYRFKNPNLLKLALTHKSATHDDKSCYERLEFLGDAVLELVVSKYLFEHFPQ 60 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EG+++ +RAT+V TL+++A L + G E K G +SI +D +EA+ GG Sbjct: 61 LSEGELTNLRATIVCSETLSKVAETLNLKRYIVFGKNEKKEGFEGNKSIWSDVLEAIFGG 120 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +FL+S EK+++N + + + + G D KT+LQE++Q Y + E Sbjct: 121 IFLESGFDMAEKIVINLLEPFIKKAAEGKLFYDYKTKLQEFIQREKNVKIKY-IDYENFE 179 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + F + G ++ G G+S+++A+Q AA ALKKL Sbjct: 180 DNLSRFKSELYI-GKNKISEGYGNSKKEAQQEAALNALKKL 219 >UniRef50_C7GYL4 Ribonuclease III n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYL4_9FIRM Length = 252 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 11/232 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANAL 56 ++ L+ K+ Y F+ + LL ALTH S K N+RLE+LGD+IL VI L Sbjct: 3 NLDALETKINYKFSDRNLLITALTHVSMLGKVHNMDRKSTNQRLEYLGDAILYLVIGELL 62 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + + P DEG++++ R+ +V ++L+E+A++ +LG + + K G R E+ILADT Sbjct: 63 FIKRPDYDEGNLTKARSNIVNNHSLSEMAKKLDLGRHIEMDSSTEKHMGRRNEAILADTF 122 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL--PTY 174 EAL+G +FLD+ + + I + R++E + G+ + D KTRLQE + + Y Sbjct: 123 EALMGAIFLDAGYEKTHEFINKLFIKRIEEAATGEAKADYKTRLQECVHACGITNYYIKY 182 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + +G+ H + F I ++ ++ G G S+++A+Q AA + ++ + Sbjct: 183 HTISEKGDQHCKTFRIGAYLNN-TKLSEGVGKSKKEAQQNAARLFFENMKND 233 >UniRef50_Q1NXA7 Ribonuclease III n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NXA7_9DELT Length = 233 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 111/214 (51%), Gaps = 8/214 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANA 55 N + +GY F LL+ AL H S +++ NERLEFLGD++L +A Sbjct: 4 NSDPLAARLAAMGYRFKRTSLLELALVHSSRAAEAGKGVSSNERLEFLGDAVLGLAVAAL 63 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY P + EGD+SR RA LV LA +AR+ LGE +RLG GE +GG + SILA T Sbjct: 64 LYEAHPTMPEGDLSRHRAALVNEEHLAGMARQLALGEFIRLGRGEEATGGRDKPSILAAT 123 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EAL+G V+LD + L+ + + P + D K+ LQE LQ RH P Y Sbjct: 124 FEALVGAVYLDGGYEPALALLRPLFAPWVANP-PLPRISDSKSALQEVLQQRHGEGPVYY 182 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 + G HD+ FT+ ++ G G G ++ Sbjct: 183 LENEEGPDHDKRFTVRVELQG-KVLGRGRGRGKK 215 >UniRef50_B3E2K4 Ribonuclease III n=1 Tax=Geobacter lovleyi SZ RepID=B3E2K4_GEOLS Length = 228 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 9/206 (4%) Query: 12 KLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRVD 64 LG++F +Q LLQQALTH S ++ +RLEFLGD++L +++A+ L FP + Sbjct: 8 ILGHSFINQRLLQQALTHPSYLNEARQEGAADYQRLEFLGDAVLGFLLADLLCQHFPALP 67 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EGD+SR+R++LV LA LA + + + +G G + GG SILAD EAL+G + Sbjct: 68 EGDLSRLRSSLVDQPRLARLAVDAGIPPLILMGKGAEREGGRTNPSILADVFEALLGAIH 127 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPG-DKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 D+ V++++ + Y ++ I+ G D K+ LQE L R P Y +V +G Sbjct: 128 CDAGFAAVQQVVKHIYAPLVNAIAAGTPAHHDAKSELQELLAARKQAAPVYNLVDQQGPD 187 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRR 209 HD+ F I V G+ G G S++ Sbjct: 188 HDRLFCIEVSVDGMP-LGQGQGRSKK 212 >UniRef50_A0YTE9 Ribonuclease III n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YTE9_9CYAN Length = 395 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 83/232 (35%), Positives = 134/232 (57%), Gaps = 14/232 (6%) Query: 7 NRLQRKLG-YTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 RL+ L F LLQ+ALTHR+ +H NE+LEFLGDS+L+++ + LY Sbjct: 164 ERLKELLETIPFQDARLLQRALTHRTYVFEHPTKTEGDNEQLEFLGDSVLNFLAGDYLYE 223 Query: 59 RFPRV-DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 ++ DEG+++R R++ V + A+ A + LGE ++LG GE GG + S+L++T E Sbjct: 224 QYSHRRDEGELTRRRSSFVDNSQFAQFAVKLNLGEWMQLGKGEELQGGRTKSSLLSNTFE 283 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTR----LDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 A++G +LDS I+ V +LI ++++ +++ P D K RLQ Q LP+P Sbjct: 284 AVMGAYYLDSGIEAVRELIKPFFESVDTATVEDSIPQQTLIDVKGRLQNLAQTNDLPIPE 343 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 Y VV G+ H + FT+ +++ GTG+ +++AE+ AA AL+ L L Sbjct: 344 YYVVSEMGKDHAKIFTVEVRIN-RKFYGRGTGNKKKEAEKQAAIDALQCLGL 394 >UniRef50_Q0C3T9 Ribonuclease III n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C3T9_HYPNA Length = 234 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 11/230 (4%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 + P + Q +G+ F +L++ALTH SA N+RLEFLGD +L+ +IA Sbjct: 5 LPPEALKEAQEIIGFKFKDAAILERALTHPSAIPPSGDTVKLSNQRLEFLGDRVLNLIIA 64 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 L R EGD++ LV+ AE R L + L E+ +GG RES L Sbjct: 65 ERLIERRQSDSEGDLAPRLNRLVKKGACAEAMRFLGLQRFILLSESEVAAGGHDRESTLG 124 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA+I ++ + + K I + + + + KDPKT LQE+ QG+ PLP Sbjct: 125 DACEAVIAAIYQEGGLAAARKFIERAWAPQFENVPAET--KDPKTLLQEWAQGQGHPLPD 182 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 Y+V G H ++ + +++ TG S+R+AE+ AA L+ L Sbjct: 183 YVVTGRSGPDHAPQYEVEVRLAVGK--ATATGPSKREAERHAAALMLRTL 230 >UniRef50_C3PH92 Ribonuclease III n=12 Tax=Corynebacterium RepID=C3PH92_CORA7 Length = 256 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 85/221 (38%), Positives = 125/221 (56%), Gaps = 8/221 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRV 63 L + LG N ELL ALTHRS ++++ NERLEFLGD++L IA LY ++P Sbjct: 25 LLKALGVEIND-ELLCLALTHRSFANENGHLPNNERLEFLGDAVLGLSIAAKLYEKYPSR 83 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 E D+S+MRA++V L+++ARE +GE + LG GE +GG ++SILADT EA++G + Sbjct: 84 PESDISKMRASIVSRYGLSDVAREIGVGEHVLLGKGEQSTGGRDKDSILADTTEAILGAI 143 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 + + ++L + ++D + D KT LQE +P Y G Sbjct: 144 YRQHGFEVARGVVLKLFAAKIDNAVVSGRHMDWKTTLQELCAELKAAMPVYSATST-GPE 202 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 HDQ F V+GL+ GTG +++ AEQ AAE+A + L Sbjct: 203 HDQTFNAVATVAGLT-VGRGTGHNKKLAEQQAAEEACQALR 242 >UniRef50_B2SAD9 Ribonuclease 3 n=62 Tax=Rhizobiales RepID=RNC_BRUA1 Length = 245 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 109/215 (50%), Gaps = 6/215 (2%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPRVDE 65 L+ + G+ F + + L++ALTH S + + ERLEFLGD +L +A L+ FP E Sbjct: 22 LEERTGHRFLNLKRLERALTHSSVQAPARANYERLEFLGDRVLGLTVAEMLFEAFPEASE 81 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G++S LV T A +A E L + + G R ++ AD VEALI ++L Sbjct: 82 GELSVRLNALVNAETCAAIADEIGLADLIHTGSDIKSLNDKRLLNVRADVVEALIATIYL 141 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D ++ I +++ R E G ++D KT LQE+ + P Y ++ G HD Sbjct: 142 DGGLEAARSFIQRYWKKRSLET--GAARRDAKTELQEWAHQQGNVHPVYAILSRSGPDHD 199 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 F + V G + P G G S+R AEQ+AAE L Sbjct: 200 PLFLVEVTVKGFA-PEKGEGRSKRIAEQSAAEAML 233 >UniRef50_Q9Z5U2 Ribonuclease 3 n=9 Tax=Sphingomonadales RepID=RNC_ZYMMO Length = 223 Score = 218 bits (557), Expect = 9e-56, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 3/207 (1%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61 N I+ +++ LG+ L +A+TH S + +RLEFLGD +L VIAN LY FP Sbjct: 3 NDAFISWIEKNLGHRPKDPALFLRAMTHPSHGNSDYQRLEFLGDRVLGLVIANWLYDLFP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 R EG +SR +LV G + A +AR L + LRLG G +++L D +EA+IG Sbjct: 63 REPEGKLSRRLNSLVSGASCASIARIVGLPQWLRLGKQARDDGAAASDNVLGDVMEAMIG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +FL+S I+ KLI ++ + K PK+ LQE+ + P Y +V G Sbjct: 123 AIFLESGIEAAGKLIHKYWAPLV--TGQESAPKHPKSALQEWAAAHNRRPPVYEIVSRTG 180 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSR 208 H+ FTI ++G+ E GSS+ Sbjct: 181 PQHNPCFTIQVSIAGVGE-ASAEGSSK 206 >UniRef50_C1TMA2 Ribonuclease III n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMA2_9BACT Length = 244 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 10/226 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHR 59 ++ +Q +LGY+F ELL++ALTH S + + NERLEFLGD++L + L+ Sbjct: 9 NLSLIQDRLGYSFTDIELLREALTHSSYAHESGLRSWNERLEFLGDAVLELATSTRLFRA 68 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSG-GFRRESILADTVEA 118 +DEG ++R+RA LVR L A L LR+ G K G G S+ AD +EA Sbjct: 69 MKDMDEGGLTRLRARLVRKEALLTWAEALGLSGILRVNRGLRKKGEGCDLSSMHADAIEA 128 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDE---ISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 + G V++D E ++ + ++ I G+ DPK+ LQ+ LQ + PLP Y Sbjct: 129 IFGAVYMDGGYDMAESVVNRYLDFLFEKGDYIQDGNSSIDPKSELQQILQIKGEPLPEYR 188 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 ++ G H F + VSG+ G G S ++AE AA L Sbjct: 189 IMSREGPPHSPSFEVELYVSGV-LLSSGRGRSIKEAEVQAALDGLS 233 >UniRef50_B4WL11 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WL11_9SYNE Length = 228 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 10/216 (4%) Query: 16 TFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 TF + L QQA+TH+S +++ HNERLEFLGD+IL+++ A L+ RFP+ EG+++ Sbjct: 15 TFTNSALWQQAMTHKSFANEQPTATEHNERLEFLGDAILTFLSAEYLFVRFPKQSEGELT 74 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS-- 127 MR+ LV + L A+ +L E LRLG G K G + +L EALIG FLD Sbjct: 75 PMRSALVDQSQLHRFAQGLKLDEYLRLGKGAEKEGARKSARLLCSAFEALIGAYFLDQEH 134 Query: 128 DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 ++Q V+ I +++ + KD KTRLQE+ Q +P Y+ + G H +E Sbjct: 135 NLQLVKDYITPIFESAIAPDVEAG-VKDDKTRLQEWAQKTTGSVPEYVEISTLGPDHAKE 193 Query: 188 FTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 F I Q+ G S G+G S++KA++ AA L+ L Sbjct: 194 FVIEVQIGGKSY-GRGSGRSKQKAQKLAARSTLEML 228 >UniRef50_Q049R1 DsRNA-specific ribonuclease n=4 Tax=Lactobacillus delbrueckii RepID=Q049R1_LACDB Length = 231 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 11/225 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 I L K G F LL++A TH S +++ E+LEFLGD++L + +++ LY Sbjct: 7 IKMLDEKYGIRFKDVRLLEEAFTHSSYLNENPGKTLGNYEKLEFLGDAVLEFTVSDYLYR 66 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 F ++EG+++R+R+ +VR +++A + E + LG GE K+GG +R+++L D EA Sbjct: 67 HFQHLNEGELTRLRSNIVRTEGFSKVALDCGFKEEINLGVGEEKAGGRKRKALLEDVFEA 126 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 G +FLD I+ VEK + + +D KT LQE LQ Y V+ Sbjct: 127 FNGALFLDQGIEAVEKFLSQTVYPLIAAGYFTPS-RDFKTDLQELLQQNGSVTIEYRVLN 185 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + F + V G + G G +++KAEQ AA AL+ L Sbjct: 186 ESQQP--PHFEVEVLVDG-KKLASGEGRNKKKAEQDAASHALEHL 227 >UniRef50_UPI00016C442D ribonuclease III n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C442D Length = 215 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 21 ELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVR 77 ELL+ ALTH S+++ NERLEFLGDS+L V LY RFP EGD++++++ +V Sbjct: 2 ELLRSALTHTSSANTRAASNERLEFLGDSVLGLVTCEQLYRRFPEYQEGDLTKVKSAVVS 61 Query: 78 GNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLIL 137 T A ++E LG+ L LG G + S G +ILA+ E+L+ VFLD +L Sbjct: 62 RKTCARFSQEIRLGDFLFLGRG-VNSNGEMPLNILANAFESLVAAVFLDGGWDAARDFVL 120 Query: 138 NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL 197 ++ +D ++ + K++LQ Q + P Y ++ +G +++ F + QV Sbjct: 121 DFIDPEVDRVARDAISANAKSQLQTVTQREYGDTPRYFLLDEQGPDNNKCFKVAAQVHDE 180 Query: 198 SEPVVGTGSSRRKAEQAAAEQALKKLELE 226 P G ++++AE AA AL + E Sbjct: 181 RFPA-AWGHTKKEAELKAAMNALAHIHGE 208 >UniRef50_Q2IIE0 Ribonuclease III n=5 Tax=Cystobacterineae RepID=Q2IIE0_ANADE Length = 385 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 8/216 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALY 57 + L+ +LG +E ALTH+S ++H NERLEFLGD+++ +++ L Sbjct: 24 PVGALEARLGLAVADREAALAALTHKSYVNEHREDGLQDNERLEFLGDAVIDLAVSHRLM 83 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 RFP EGD+S+MRA +V LAE+AR +LG LRLG GE +GG ++ S+LAD +E Sbjct: 84 ERFPSAREGDLSKMRAAVVDEQGLAEMARTLDLGALLRLGRGEELTGGRQKSSLLADAME 143 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+I ++ + V + + + G +D KT+LQE Q R P Y VV Sbjct: 144 AVIAAIYRGQGLPAVLSFVDRFLGEAFARAAAGTLDRDFKTQLQELSQSRLRATPRYRVV 203 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 G H + F + + G G G S++ AEQ Sbjct: 204 AEHGPDHSKTFEVETDLRG-EVMGRGAGRSKKDAEQ 238 >UniRef50_A9WJ69 Ribonuclease 3 n=3 Tax=Chloroflexus RepID=RNC_CHLAA Length = 244 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 13/211 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK---------HNERLEFLGDSILSYVIANAL 56 + L+R +G TF + LLQ A HRS ++ NERLEFLGDS+L +V L Sbjct: 5 LAELERAIGITFRDRTLLQTAFMHRSLFNEQPHLLNHLTDNERLEFLGDSVLHFVTTTWL 64 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + FP DE ++ RA LV LAE A +F LG+ L GE GG R+ +LAD Sbjct: 65 FETFPDQDEATLTNWRAALVSTKGLAECAAQFNLGQYAYLSRGEDNPGGRSRQKLLADLF 124 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EAL+G ++LD ++T I+ ++Q R+++I D DP TRLQE +Q R LP Y + Sbjct: 125 EALVGAIYLDQGLETARAFIVPFWQARIEQIIHIDL--DPTTRLQELMQARFKQLPDYSI 182 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 + RG H +E+ + V+G G+GSS Sbjct: 183 EEERGPEHQREYVMAVTVAGRK--FTGSGSS 211 >UniRef50_B4RJT7 Ribonuclease 3 n=30 Tax=Neisseriaceae RepID=RNC_NEIG2 Length = 239 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 95/202 (47%), Positives = 128/202 (63%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 +Q+KLGY F LL++ALTHRS +KHNER EF+GDSIL+Y +A L+ FP++ EG Sbjct: 12 TAIQKKLGYAFRDMSLLRRALTHRSHHAKHNERFEFVGDSILNYTVARMLFDAFPKLTEG 71 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++SR+RA+LV LAE+A E +G+ L LG GELKSGGFRR SILAD +EA+ V D Sbjct: 72 ELSRLRASLVNEGVLAEMAAEMNVGDGLYLGAGELKSGGFRRPSILADAMEAMFAAVSFD 131 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 +D T EK++ + + R+ ++ KD KT LQE LQ R LP Y + + G A+D Sbjct: 132 ADFNTAEKVVRHLFAERVRRADFQNQAKDGKTALQEALQARRFALPKYRIEEQIGHANDS 191 Query: 187 EFTIHCQVSGLSEPVVGTGSSR 208 F I C + L G+SR Sbjct: 192 MFVISCDLGELGFVCRAKGTSR 213 >UniRef50_P74368 Ribonuclease 3 n=1 Tax=Synechocystis sp. PCC 6803 RepID=RNC_SYNY3 Length = 231 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 74/220 (33%), Positives = 113/220 (51%), Gaps = 14/220 (6%) Query: 19 HQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRA 73 +L +ALTHRS ++H +RLEFLGD++L +V+ L+ R+P E +++R+R+ Sbjct: 11 DPQLKLEALTHRSYCNEHPGTPSYDRLEFLGDAVLGFVVGRILFERYPHFTEAELTRLRS 70 Query: 74 TLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVE 133 LV N LA LAR + +RL + G SILAD E+L+G LD + VE Sbjct: 71 QLVNQNQLAYLARFLHIAPEIRLSQSLARDDGQSSPSILADVFESLLGAALLDRGLTAVE 130 Query: 134 KLILNWYQTRLDEISPGDKQKDP--------KTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 I + L++ + P K+ LQ++ + LP Y ++ G H Sbjct: 131 DFIQELFVPILEQWEKSQDGRSPKLVPTMDVKSMLQQWALAKTKQLPEYELINTSGPPHA 190 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 QEFT +V+G G+G S++ A + AA +ALK L L Sbjct: 191 QEFTFTVKVAGKIH-GQGSGPSKQIATKQAALEALKSLGL 229 >UniRef50_B9ZJG8 Ribonuclease III n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJG8_9GAMM Length = 236 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 93/184 (50%), Positives = 117/184 (63%) Query: 24 QQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAE 83 +QALTHRSA ++NERLEFLGD++L VIA+ALY + P EGD++R+RA LV +LA Sbjct: 30 RQALTHRSAGGRNNERLEFLGDAVLGLVIADALYEQLPDAPEGDLTRLRAALVNRESLAA 89 Query: 84 LAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTR 143 LARE L L LG GE KSGG RR+SILAD VEALIG + ++ +Q L Y R Sbjct: 90 LARESGLEGTLNLGQGERKSGGQRRDSILADAVEALIGVTYREAGMQAARDFTLALYAER 149 Query: 144 LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVG 203 L + + KDPKTRLQE LQGR+ LP Y V++V G H + FT+ + G Sbjct: 150 LGNLPSAESLKDPKTRLQEQLQGRNAELPVYEVLEVVGPDHQRRFTVSVHLPTQGWGQQG 209 Query: 204 TGSS 207 GSS Sbjct: 210 EGSS 213 >UniRef50_A7BCY7 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCY7_9ACTO Length = 240 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 120/214 (56%), Gaps = 7/214 (3%) Query: 19 HQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRA 73 LLQ AL HRS +++ +NERLEFLGDS+LS VIA LY ++P V E D+SRMRA Sbjct: 27 DAPLLQLALVHRSYANEAGGIANNERLEFLGDSVLSIVIAQKLYEQYPDVAESDLSRMRA 86 Query: 74 TLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVE 133 V LA AR LG+ + LG GE GG ++SIL+DT EALIG +L S ++ Sbjct: 87 ATVSQQPLAAAARRIGLGDFVFLGKGESMHGGRDKDSILSDTFEALIGATYLTSGLEEAR 146 Query: 134 KLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQ 193 ++IL L + + +D KT L EY Q L +Y V+ G H + FT Sbjct: 147 RVILERLSFLLVDAPSRGQHQDWKTILIEYSQAHGLGEVSYE-VEGEGPDHQRVFTARAF 205 Query: 194 VSGLSEP-VVGTGSSRRKAEQAAAEQALKKLELE 226 VS +P G SS++ AE AAA+ A+ +L E Sbjct: 206 VSERPDPIGSGQASSKKHAENAAAQDAMSRLSPE 239 >UniRef50_D0YUT0 Ribonuclease III n=3 Tax=Mobiluncus RepID=D0YUT0_9ACTO Length = 269 Score = 216 bits (550), Expect = 6e-55, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 107/202 (52%), Gaps = 10/202 (4%) Query: 19 HQELLQQALTHRSASSKH--------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 +LL A+THRS S +H NERLEFLGD++L ++ LY FP EG +++ Sbjct: 35 DPDLLVLAMTHRSFSHEHGKTGSRGTNERLEFLGDAVLQIIVTEYLYRNFPDEPEGTLAQ 94 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 MRA V LAE+AR+ LGE LRLG GE + GG ++SIL+DT+EALIG FL + Sbjct: 95 MRAATVSQTPLAEVARKIHLGEYLRLGVGEDRQGGRDKDSILSDTLEALIGATFLSCGLS 154 Query: 131 TVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 ++ + L D KT LQE L L TY VV G H + F+ Sbjct: 155 VTRVVVERHLRRFLRNAPRRAVTLDWKTTLQELLSAADLGEVTYEVVAT-GPDHQKHFSA 213 Query: 191 HCQVSGLSEPVVGTGSSRRKAE 212 V G + G GSS++ AE Sbjct: 214 QALVEGENW-GEGQGSSKKIAE 234 >UniRef50_UPI0001553722 PREDICTED: similar to ribonuclease III, nuclear n=1 Tax=Mus musculus RepID=UPI0001553722 Length = 1241 Score = 215 bits (549), Expect = 7e-55, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G F H LL +A T R+ H N+R+EFLGDSI+ V L+ F Sbjct: 972 LTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHF 1031 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++ +R++LV T A++A E + E + K R LAD +E+ I Sbjct: 1032 PDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITN-DKTKRPVALRTKTLADLLESFI 1090 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 +++D D++ V + + RL E DPK++LQ+ +G+ +P Y Sbjct: 1091 AALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYK 1150 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +Q G +H + +T+ G G G S ++AE AA AL+K Sbjct: 1151 TLQTVGPSHARTYTVAVYFKG-ERIGCGKGPSIQQAEMGAAMDALEK 1196 Score = 91.4 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 9/132 (6%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ + LY+ FP ++EG ++ R +V+ LA LA+ L Sbjct: 829 NHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKSL---SFL 885 Query: 95 RLGPGELKSGG----FRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPG 150 G + +L D ++L+G V+L+ ++ ++L D Sbjct: 886 IYKVGSTLASTHMLLLIHSVMLTD--QSLLGAVYLEGSLEEAKQLFGRLLFNDPDLREVW 943 Query: 151 DKQKDPKTRLQE 162 +LQE Sbjct: 944 LNYPLHPLQLQE 955 >UniRef50_A5V230 Ribonuclease 3 n=2 Tax=Roseiflexus RepID=RNC_ROSS1 Length = 237 Score = 215 bits (549), Expect = 7e-55, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 115/212 (54%), Gaps = 10/212 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH---------NERLEFLGDSILSYVIANAL 56 ++ L +LG TF+ Q LL+QALTH S ++H NERLEFLGD+I++++ A + Sbjct: 5 VDELSARLGVTFSDQRLLEQALTHSSFLNEHVEERMHLDSNERLEFLGDAIINFLAARLV 64 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + RFP EG+++ R L+R TLA A+ + LG + L GE SG +R+++LADT Sbjct: 65 FERFPDAGEGELTAWRTALIRTETLAGFAQRYNLGAYVLLARGEESSGARQRQALLADTF 124 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+I +FLD + V +L ++ L + D K+RLQ +Q P Y Sbjct: 125 EAVIAALFLDQGLNAVRTFLLPLFEAELASLPDRTLPVDYKSRLQARIQAERRVTPRYHE 184 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 + G H EFT+ + +G G G S+ Sbjct: 185 IDRSGPEHRPEFTVEVR-AGEERLGTGKGPSK 215 >UniRef50_D0RNU3 Ribonuclease III n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNU3_9RICK Length = 225 Score = 215 bits (548), Expect = 9e-55, Method: Composition-based stats. Identities = 73/229 (31%), Positives = 123/229 (53%), Gaps = 7/229 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSAS---SKHNERLEFLGDSILSYVIANALY 57 M + ++++ L FN++ L++QA TH+S S + +NERLEFLGD +L VIA+ L Sbjct: 1 MKKNDLAQVEKILEIKFNNKSLIEQAFTHKSKSVNINNNNERLEFLGDRVLGLVIASYLN 60 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +P+ EG + + A+LV T +++ E+ L L + K + IL D E Sbjct: 61 DNYPKDSEGVLDKKLASLVNKETCSKIISSLEIDRFLSLSEAQ-KQNKAGNKKILGDLCE 119 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 ++IG VF+D + +K IL ++ L + DPKT+LQEY + LP Y + Sbjct: 120 SIIGAVFMDKGFEQTKKFILKIWKENLKNTT--QVFIDPKTKLQEYSLKLYKKLPVYKYI 177 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G +H F + + S+ V TG+S++ AE AA++ ++ L+++ Sbjct: 178 SNSGPSHKPNFRVSVSIE-QSKSFVATGTSKKNAETNAAKKLIEYLKIK 225 >UniRef50_B0SDK6 Ribonuclease III n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDK6_LEPBA Length = 242 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 9/227 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 + LQ +F LL A HRS +++ NERLEFLGDS+L + A LY Sbjct: 17 LQELQSITDTSFKDISLLHLAFVHRSFANEDSDRYLSDNERLEFLGDSVLGILAAEYLYK 76 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P+ EG ++++++ +V +A+LAR + + L LG GE K G ++ AD EA Sbjct: 77 SLPKGKEGILAKLKSKMVSAPAIAKLARFYRFPDFLLLGKGE-KEKGEANLNLQADCFEA 135 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +G ++LD + + + +QT + ++ KD KT LQEY Q + LP Y++++ Sbjct: 136 FLGALYLDQGLNSCRIFLTPHFQTMEKGVESAEETKDYKTILQEYCQKKWKKLPEYILLK 195 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 G HD++F++ + G G ++R+AEQ AA+ AL+ L+L Sbjct: 196 EEGPDHDKDFSVSVSCENYFQS-NGDGKNKRRAEQMAAKAALRILKL 241 >UniRef50_Q9NRR4 Ribonuclease 3 n=53 Tax=Eumetazoa RepID=RNC_HUMAN Length = 1374 Score = 215 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G F H LL +A T R+ H N+R+EFLGDSI+ V L+ F Sbjct: 1107 LTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHF 1166 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++ +R++LV T A++A E + E + K R LAD +E+ I Sbjct: 1167 PDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITN-DKTKRPVALRTKTLADLLESFI 1225 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 +++D D++ V + + RL E DPK++LQ+ +G+ +P Y Sbjct: 1226 AALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYK 1285 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +Q G +H + +T+ G G G S ++AE AA AL+K Sbjct: 1286 TLQTVGPSHARTYTVAVYFKG-ERIGCGKGPSIQQAEMGAAMDALEK 1331 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 63/128 (49%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ + LY+ FP ++EG ++ R +V+ LA LA++ EL + Sbjct: 963 NHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFM 1022 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQK 154 G +A+ EALIG V+L+ ++ ++L D Sbjct: 1023 LYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNYP 1082 Query: 155 DPKTRLQE 162 +LQE Sbjct: 1083 LHPLQLQE 1090 >UniRef50_C0VZE3 Ribonuclease III n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZE3_9ACTO Length = 256 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 106/205 (51%), Gaps = 7/205 (3%) Query: 19 HQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRA 73 ELL ALTHRS + + NERLEFLGDS+LS ++ LY +P+ E ++SRMR Sbjct: 32 DPELLILALTHRSFAFEVGNIEPNERLEFLGDSVLSIIVTEYLYKNYPQSSEANLSRMRG 91 Query: 74 TLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVE 133 +V TL+++AR LG+ + LG GE +GG R+SIL D EA+IG +L ++ Sbjct: 92 AIVSEKTLSQVARNIRLGDFILLGKGENLTGGRDRDSILCDMTEAMIGATYLSHGLEATR 151 Query: 134 KLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQ 193 +++ + L+ K D KT LQEY L P Y + G H + F Sbjct: 152 RIVEYHLRPFLERAVELGKSSDYKTTLQEYCAEASLGEPIYEA-EGFGPDHARYFIATVT 210 Query: 194 VSGLSEPVVGTGSSRRKAEQAAAEQ 218 V G G SS++ A+ AA Sbjct: 211 VGG-ELVGHGQASSKKGAKSEAARA 234 >UniRef50_A9B5J8 Ribonuclease III n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5J8_HERA2 Length = 234 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 126/212 (59%), Gaps = 11/212 (5%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANAL 56 + +N+LQ +LGYTFN L+ A+ HRS +H NERLEFLGD++L+++ + L Sbjct: 1 MDLNKLQAELGYTFNDLNFLRAAMLHRSYVHEHPEAGSESNERLEFLGDALLNFICGSFL 60 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 +H FP + EGD+++ RA LV+ TLA LAR F LG +++ GE ++ R+++LAD Sbjct: 61 FHEFPELGEGDLTKTRAMLVQTRTLAGLARRFNLGSYVQISRGEERAKARERDNLLADAF 120 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EAL+ + LD + +L ++ + G + +D KT LQ+Y+QGR P+Y Sbjct: 121 EALLAAIALDGGWEAARNFVLPLLKSV---KASGVQNQDYKTDLQQYVQGRINLTPSYRE 177 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 V V G H++ +TI +G + VG G+S+ Sbjct: 178 VNVTGPDHERTWTIEVW-AGDALLGVGVGTSK 208 >UniRef50_A4E6T0 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E6T0_9ACTN Length = 241 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 7/209 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS-----SKHNERLEFLGDSILSYVIANALYHRF 60 + R Q LG+ FN++ LL+ ALTH SA S ERLEFLGDSIL V+A +L+ + Sbjct: 7 LTRAQEILGHEFNNKVLLRAALTHPSAVEGQPVSASYERLEFLGDSILGAVVARSLFESY 66 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P DEG ++R++ +LV G TL+E++ E + + + G E +G S L + E+L+ Sbjct: 67 PEFDEGKLTRLKVSLVSGATLSEVSHELGIDDIIIFGASETGTGARGLHSALENVYESLV 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD+ + I + L + +PK+ LQE +Q P Y +V Sbjct: 127 GALYLDAGWDVAAEFIHRTLKPHLAS-ERAEHPANPKSFLQECVQADGHEPPAYKLVGSE 185 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G AH FT + G+ + GTGSS++ Sbjct: 186 GPAHAPTFTAVVLIDGIRQ-GRGTGSSKK 213 >UniRef50_Q4JUY7 Ribonuclease 3 n=9 Tax=Corynebacterium RepID=RNC_CORJK Length = 244 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 80/208 (38%), Positives = 122/208 (58%), Gaps = 8/208 (3%) Query: 21 ELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 +LL+ ALTHRS ++++ NERLEFLGD++L +A LY +FP E D+S+MR+ + Sbjct: 36 DLLRLALTHRSFANENGHLPNNERLEFLGDAVLGLAVAEQLYRQFPERAESDISKMRSGV 95 Query: 76 VRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKL 135 V LA++AR +G+ + LG GE+ +GG + SILAD+VE+++G ++L + Sbjct: 96 VNMYALADVARRLGMGDYILLGRGEMLTGGKDKHSILADSVESMLGAIYLHHGFEVARAT 155 Query: 136 ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVS 195 +L + ++ E D KT L E L LPLPTY V+ G HD+ F + Sbjct: 156 VLRLFAEKITEAPTTGLTMDWKTVLLEKLSDMKLPLPTYE-VRGEGPEHDKTFYATVTIE 214 Query: 196 GLSEPVVGTGSSRRKAEQAAAEQALKKL 223 L G G +++ AE AAA+QA++KL Sbjct: 215 DL--VTHGEGHTKKVAEHAAAKQAVQKL 240 >UniRef50_C8WGU4 Ribonuclease III n=2 Tax=Coriobacteriaceae RepID=C8WGU4_EGGLE Length = 281 Score = 213 bits (542), Expect = 5e-54, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 8/219 (3%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVD 64 Q LGY F ++LL A+TH SA+ ERLEFLGDSIL ++A + RF +D Sbjct: 15 QEILGYRFADEQLLLSAITHPSATEGKSVKYSYERLEFLGDSILGAIVATIAFDRFHDLD 74 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG ++R++ LV G +L+++A + + G E +G S L + EA++ +F Sbjct: 75 EGGLTRIKVALVSGASLSDVAERLGFADVIVFGSSETGTGRRGLHSALENVYEAVVAALF 134 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 LD I+ E + R+ + + +PK+ LQE LQ PTY +V+ +G H Sbjct: 135 LDGGIEAAEGFVRATLIPRMSADMAREPE-NPKSALQEKLQ-EDGITPTYKLVETQGPPH 192 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 D+ F +G GTG ++++AE AA+ L +L Sbjct: 193 DRTFVAQV-FAGSQGLARGTGRTKKEAESQAAKSTLARL 230 >UniRef50_D2LJ11 Ribonuclease III n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJ11_RHOVA Length = 236 Score = 213 bits (542), Expect = 5e-54, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 116/211 (54%), Gaps = 7/211 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSK----HNERLEFLGDSILSYVIANAL 56 + + L+ LGY F + LL +ALTH SA S+ NERLEFLGD +L IA L Sbjct: 3 IKKPRVEELEASLGYKFQERGLLAEALTHSSARSEKGGRDNERLEFLGDRVLGLSIAALL 62 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + RFP+ E +++R LV T AE+A + ELG L + P E +SGG +++ ILAD V Sbjct: 63 FERFPKAREVELARHFNALVCKTTCAEVALKLELGPHLVMAPSEARSGGRKKDVILADAV 122 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EAL+G + +D E ++ ++ + S D KT LQE+ Q + LP Y Sbjct: 123 EALLGAISVDGGFAAAETVVHRHWEPFIA--SSEPPAPDAKTALQEFAQSQKRGLPDYHE 180 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 V+ G H FT+ +V GL +P GTGSS Sbjct: 181 VERSGADHAPNFTVEVRVQGL-KPERGTGSS 210 >UniRef50_Q3B6L3 Ribonuclease 3 n=9 Tax=Chlorobiaceae RepID=RNC_PELLD Length = 276 Score = 212 bits (541), Expect = 7e-54, Method: Composition-based stats. Identities = 82/234 (35%), Positives = 112/234 (47%), Gaps = 16/234 (6%) Query: 3 PIVINRLQRKLGYTFNHQ----ELLQQALTHRSASSK--------HNERLEFLGDSILSY 50 P + R L F + EL ALTHRS N+RLEFLGDS+L Sbjct: 27 PPSLTAFIRSL---FKGKALSLELYATALTHRSMVHDTTAPEITRSNQRLEFLGDSVLGL 83 Query: 51 VIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRES 110 +I+ LY RFP EG++S RA +V G +LA AR +LG L +G + S Sbjct: 84 IISEYLYRRFPEGTEGELSSYRAKIVNGKSLAGFARNLDLGIHLIIGESADQQRIRTSTS 143 Query: 111 ILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP 170 LAD EAL G ++LD + V + I + + + K+RL E+ Q LP Sbjct: 144 TLADAFEALTGAIYLDRGLDAVREFIEEQIIDSPAFEAMVSTENNHKSRLIEHTQSHQLP 203 Query: 171 LPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 P Y V+ G H++ FTI +G GT ++ AEQ AAE+A+ LE Sbjct: 204 PPVYTVLSEEGAEHEKTFTIEVSCNG-RRLGRGTALRKKDAEQLAAEEAMGALE 256 >UniRef50_A5UJK3 Ribonuclease III (DsRNA-specific), Rnc n=2 Tax=Methanobrevibacter smithii RepID=A5UJK3_METS3 Length = 223 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 9/224 (4%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPR 62 L K + L A TH S +KH ERLEFLGDS+L+ +++ LY ++P Sbjct: 2 NLLEKFNILPKDRHLYDVAFTHGSYGTKHGLDYTYERLEFLGDSVLNMIVSEYLYKQYPD 61 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 +EG ++++RA V L + E L + +++ + K SI AD E+ +G Sbjct: 62 YEEGKLTKLRANYVCQTALIYYSHELGLDKHIKIYGDDSKITENEVLSITADVFESFLGA 121 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +FLD I+ + I +D + D K+ ++EY + + + Y ++ G Sbjct: 122 IFLDQGIEFAKDYISKIIFPYID--AKKVFFFDYKSVIKEYGDAQEVDI-EYKIIDECGV 178 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H++ F I + G E VG G ++++AEQAA++QA+KKL+++ Sbjct: 179 PHNKTFIISILIDG-KEMGVGKGKNKKEAEQAASKQAMKKLKIQ 221 >UniRef50_Q6PF88 Rnasen protein (Fragment) n=15 Tax=Coelomata RepID=Q6PF88_MOUSE Length = 942 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G F H LL +A T R+ H N+R+EFLGDSI+ V L+ F Sbjct: 675 LTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHF 734 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++ +R++LV T A++A E + E + K R LAD +E+ I Sbjct: 735 PDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITN-DKTKRPVALRTKTLADLLESFI 793 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 +++D D++ V + + RL E DPK++LQ+ +G+ +P Y Sbjct: 794 AALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYK 853 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +Q G +H + +T+ G G G S ++AE AA AL+K Sbjct: 854 TLQTVGPSHARTYTVAVYFKG-ERIGCGKGPSIQQAEMGAAMDALEK 899 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 63/128 (49%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ + LY+ FP ++EG ++ R +V+ LA LA++ EL + Sbjct: 531 NHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFM 590 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQK 154 G +A+ EALIG V+L+ ++ ++L D Sbjct: 591 LYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNYP 650 Query: 155 DPKTRLQE 162 +LQE Sbjct: 651 LHPLQLQE 658 >UniRef50_A1WMW1 Ribonuclease 3 n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=RNC_VEREI Length = 247 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 90/233 (38%), Positives = 125/233 (53%), Gaps = 21/233 (9%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 M P +I LQ +L + F+ LL++A THRS S++HNERLEFLGDS+L+ +++ LY R Sbjct: 1 MRPDLI-ALQERLQHVFSDPGLLERATTHRSFSAEHNERLEFLGDSVLNLAVSSLLYQRL 59 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLG--------------------PGE 100 + EG++SR+RA LVR +L +LA L + LRLG P E Sbjct: 60 SALPEGELSRVRANLVRQESLYQLALRLPLAQALRLGESLSGNRQRRSRRRCADELQPDE 119 Query: 101 LKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL 160 SGG + SILAD +EALIG V+LD+ + + L+ +Q +D KT L Sbjct: 120 AGSGGLQHPSILADALEALIGAVYLDAGYASAQALVQRLFQDVEISPRMQAAARDAKTAL 179 Query: 161 QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 QE+L R + P Y VV G AH F + C + L G+ SR+ EQ Sbjct: 180 QEWLASRKMKPPQYQVVARVGAAHCPTFEVACGIPALGLTERGSAGSRQAGEQ 232 >UniRef50_A9WMX9 Ribonuclease III n=3 Tax=Micrococcaceae RepID=A9WMX9_RENSM Length = 273 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 8/223 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFP 61 L ++LG L+ ALTHRS + ++ NERLEFLGDS+L + +ALY P Sbjct: 23 AELLKRLGVDI-DAGTLRLALTHRSFAYENGGIPTNERLEFLGDSVLGLSVTDALYRDNP 81 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG++++ R+ +V LA +ARE +GE + LG GEL + G + SILADT+EAL G Sbjct: 82 GLAEGELAKRRSAVVSTRALAGVARELGVGEFILLGQGELLTDGKNKASILADTMEALFG 141 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++ +DI+T ++++ L + D KT +QE+ R L Y V +G Sbjct: 142 AAYICNDIETARQMVMRLVGPLLADAGNFGAATDWKTNIQEHAANRQLGPVRYEVT-GQG 200 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 H + + + G S G G S+++AEQ AA + +++ Sbjct: 201 PDHARTYQALLWIGGTSYQ-SGRGHSKKEAEQDAAANSWREIR 242 >UniRef50_A6LNE7 Ribonuclease III n=2 Tax=Thermosipho RepID=A6LNE7_THEM4 Length = 231 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 77/225 (34%), Positives = 132/225 (58%), Gaps = 12/225 (5%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHRFPRV 63 ++ +GY F ++ELL ALTH S ++++ ERLEFLGDS++ ++ LY ++ + Sbjct: 8 EIEHVIGYRFRNKELLFTALTHTSYANENKKQSYERLEFLGDSVIDILVCTILYEQYQTL 67 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 +EG M+++++ + + L E+A++F LG+ + LG GE +S G ++SILAD VE+LI + Sbjct: 68 NEGTMAQIKSAVTSEDILFEIAKKFNLGKYILLGKGERRSRGSEKKSILADVVESLIAAI 127 Query: 124 FLDS--DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +LDS +++ +E L ++ +D G + D KT+LQE Q + LP Y V G Sbjct: 128 YLDSNKNLKLIENLFSKIFKDYIDIFLTGKRIFDYKTKLQELTQDKFKQLPVYETTTVGG 187 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + F +++ GSS++ AE+ AA+ A +KL+ E Sbjct: 188 K-----FITTLKINN-KIYSKAKGSSKKDAEKLAAKIAYEKLKEE 226 >UniRef50_C7N559 Ribonuclease III n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N559_SLAHD Length = 300 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 120/221 (54%), Gaps = 8/221 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 I R Q +G F + ++L A+TH SA+ ERLEFLGDSIL ++AN +HR+ Sbjct: 12 IQRAQEIIGTQFGNTDILLHAITHPSATEGKPVKLSYERLEFLGDSILGAIVANEAFHRY 71 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P +DEG ++R++ LV G +L+++A E + + G E +G S L + EA++ Sbjct: 72 PDLDEGGLTRIKVALVSGASLSKVAAELGFEDIIVFGSSEQGTGKRGLHSALENVYEAVV 131 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD ++ ++ R+ + ++PK+ LQE LQ + PTY +V+ + Sbjct: 132 AALYLDQGMEGARSFVMKTLVPRMSR-ELATEPENPKSALQEKLQEEGIT-PTYKLVETQ 189 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 G HD+ F +G+ G G +++++E AA+ AL+ Sbjct: 190 GPPHDRTFVSQV-FAGMKALASGMGRTKKESESQAAKAALE 229 >UniRef50_Q2SRZ8 Ribonuclease 3 n=4 Tax=Mollicutes RepID=RNC_MYCCT Length = 232 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 123/228 (53%), Gaps = 8/228 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYH 58 + I K N Q++ ++ALTH S +++ +RLEFLGD+IL ++ L+ Sbjct: 1 MNIKNFFEKYNIKINDQQIYKEALTHNSYANERKLKYSYQRLEFLGDAILQMYVSKFLFF 60 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 + ++ EG+++R+R++ VR +L+ +A++ LG+ +RLG GEL + G+ ++SILAD EA Sbjct: 61 HYSKLGEGELTRLRSSTVREESLSRIAKDINLGQLIRLGHGELMTKGYEKQSILADIFEA 120 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L V++D + + + + + + + KD K+ LQE LQ Y++ Sbjct: 121 LTAAVYIDQNEDGLLIWLEQTLFKYMKDPTFINVTKDFKSELQELLQSEKRSDLKYIIEN 180 Query: 179 VR--GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + +T+ + G + VG G S+++AEQ AA L KL+ Sbjct: 181 EEFFVNENKTLYTVSVNLDG-QKFGVGKGYSKQEAEQNAASDCLSKLK 227 >UniRef50_Q3SRB3 Ribonuclease 3 n=17 Tax=Rhizobiales RepID=RNC_NITWN Length = 266 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 9/207 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASS------KHNERLEFLGDSILSYVIANALYH 58 ++ ++++LG+TF LL A TH SA +RLEFLGD +L V+++ LY Sbjct: 42 IMAAIEQRLGHTFADISLLTTAFTHVSALKSSRGRCDSYQRLEFLGDHVLGLVVSDMLYR 101 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 FP+ DEG++S+ A LVR T ++A+ +L E ++LG +G R S+L D EA Sbjct: 102 AFPKADEGELSKRLADLVRKETCIDVAKSLDLQEGVKLGAVGAGAGARLRRSVLGDICEA 161 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +IG V+LD + + R+ + P +DPKT LQE+ QG+ LP P Y V+ Sbjct: 162 VIGAVYLDGGYAAAAAFVERNWLERMRK--PVRPLRDPKTVLQEWAQGKGLPTPVYREVE 219 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTG 205 G HD F + ++ GL E G G Sbjct: 220 RTGPHHDPRFRVAVELPGL-ESSEGIG 245 >UniRef50_B5JG37 Ribonuclease III n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG37_9BACT Length = 263 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 83/226 (36%), Positives = 127/226 (56%), Gaps = 8/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIANALYHR 59 + RL+ KLGYTF + LL Q+LTH S K+N+RLEFLGDS++ V+ LY + Sbjct: 36 VKRLENKLGYTFKTKGLLHQSLTHPSFLLNTKDQLKNNQRLEFLGDSVIQLVLTEKLYEK 95 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP + EG ++ +R+ RG+ +A +ARE +LG+ L L P + +G +S L D EAL Sbjct: 96 FPSLREGKLTSIRSGYARGDYMAGIARELKLGDYLILKPKDRNAGVAENDSALGDAFEAL 155 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHL-PLPTYLVVQ 178 IG ++LDSD +T K+IL Y + +PK +LQE +Q H Y + Sbjct: 156 IGAIYLDSDFETSRKIILELYNYLDTAPTAKGVIANPKGKLQELIQPVHGNNALRYETIA 215 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 GEAH++EF + + G G ++++A + AA A+ K++ Sbjct: 216 QTGEAHEREFEVAVFCHD-EQLGKGAGRTKKEAAEKAALIAIAKID 260 >UniRef50_D1C6L4 Ribonuclease III n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6L4_SPHTD Length = 259 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 86/214 (40%), Positives = 115/214 (53%), Gaps = 12/214 (5%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-----------HNERLEFLGDSILSYVIANA 55 R ++LG F +LL+ ALTHRS ++ NERLEFLGDS+L + A Sbjct: 20 ERAAQRLGIEFRDLDLLRLALTHRSYLNELGISQIEAVRDSNERLEFLGDSVLGMITAEF 79 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY RFPR+ EG ++ R LVR TLA AR F L E L LG GE+ + G R+ ILA Sbjct: 80 LYRRFPRLPEGMLTAYRTALVRTETLARWARRFGLDELLYLGRGEITADGEIRDRILAGA 139 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EA+I ++LD I+ + + ++I ++ + K RLQE +Q P Y Sbjct: 140 FEAVIAAIYLDRGIRATRRFLRQLLIEDAEQIITEGQETNYKGRLQELVQEHMRVTPMYR 199 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 V V G AHD+ FT+ V G VGTGSS+R Sbjct: 200 TVAVSGPAHDRVFTVEVVVGGEC-LGVGTGSSKR 232 >UniRef50_A9A9D4 Ribonuclease III n=4 Tax=Methanococcus maripaludis RepID=A9A9D4_METM6 Length = 229 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 122/227 (53%), Gaps = 11/227 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALY 57 +L KL FN + ++A H S ++ NERLE+LGD++L +I+ L+ Sbjct: 3 NFEKLLSKLDIKFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLELIISEYLF 62 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 + + EG+MS++RA V + L A++ + + LG GEL S G+ + +I++D E Sbjct: 63 KQ-ENLSEGEMSKLRAKYVCESALFTYAKKLKFDNYVLLGKGELISKGYNKPAIVSDVFE 121 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A I ++LD + + +K + N ++E S + D KT+LQE+ + + + Y+ + Sbjct: 122 AFIAAIYLDQGLNSAKKFVYNHILPIIEE-SSKELFIDYKTKLQEFPELINKSI-NYVNL 179 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + GE HD++F + + G G S+++AE AA+ AL KLE Sbjct: 180 EEAGEPHDKKFVVAVK-QDRKILGKGIGKSKKEAEMKAAKNALLKLE 225 >UniRef50_D0LAL1 Ribonuclease III n=11 Tax=Actinomycetales RepID=D0LAL1_GORB4 Length = 262 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 15/213 (7%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHR 59 ++ + +G ++LL ALTHRS + ++ NERLEFLGDS+L VI LY Sbjct: 13 LLTAVDTTIG-----EQLLTLALTHRSYAYENGGLPTNERLEFLGDSVLGVVITERLYLS 67 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFE---LGECLRLGPGELKSGGFRRESILADTV 116 +P EG+++++RA++V + LA++AR LG L LG GE +GG ++SILAD + Sbjct: 68 YPDRPEGELAKIRASVVNMHALADVARSLGPGGLGRHLYLGRGEEMTGGRDKDSILADGL 127 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 E+L G VF++ + T +++IL + +D D KT LQE + L P Y Sbjct: 128 ESLFGAVFIEHGLATSKRVILRLFDDVIDRAGTLGAGLDWKTSLQELSAEQGLGPPQYQ- 186 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 + G H++EFT V+G S G G +++ Sbjct: 187 ISSTGPDHNKEFTAVAVVAGES-LGNGVGRTKK 218 >UniRef50_D0WNC5 Ribonuclease III n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNC5_9ACTO Length = 228 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 6/224 (2%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHRFPR 62 L + G LL+ ALTHRS + +H NERLEFLGDS+L ++ A+ ++ FP Sbjct: 4 RELVERWGVDIRRP-LLRLALTHRSFAFEHDEPHNERLEFLGDSVLGFITADKVFREFPD 62 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EGDMSRM+ V LA +ARE ELG +RLG GE SGG ++SIL+DTVEALI Sbjct: 63 SREGDMSRMKTFAVSEKALASIARELELGRFIRLGRGEDLSGGRDKDSILSDTVEALIAA 122 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +L + K++ ++++ S D +T +E R + + G Sbjct: 123 TYLQHGLDVARKIVERLVAAKIEDASLLGPNLDWQTSFEEVAHERGMVGSLQFELTSEGP 182 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H + +T + G GTGSS++ A QAAA+ A + + E Sbjct: 183 DHQRVYTAVASMGG-RVWGEGTGSSKKTARQAAAQVAYRTITAE 225 >UniRef50_B3QS76 Ribonuclease III n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS76_CHLT3 Length = 269 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKH---------NERLEFLGDSILSYVIANALYH 58 ++ G+ ++ + ALTHRSA + NERLEFLGD++L V+A LY Sbjct: 42 EIESLTGFPISNVIHYETALTHRSAIDLNVYSKKKFVSNERLEFLGDAVLDLVVAECLYT 101 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP DEG ++++R+ LV TLA AR+ LG L + G E+ LAD EA Sbjct: 102 RFPDYDEGKLTKLRSQLVNARTLASFARKIHLGSLLIVSEAAEAIGVRDSETTLADAFEA 161 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+G ++LDSD ++ + +D + K+ L EY Q HL +PTY V+ Sbjct: 162 LVGAIYLDSDYLQTKRFLEKKILEGIDFRELSSTDNNFKSVLLEYAQAHHLEIPTYTVID 221 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G +H + FT+ + G G G S++ Sbjct: 222 EEGPSHKKVFTVAVYI-GDEMLGKGVGRSKK 251 >UniRef50_Q253V2 Ribonuclease 3 n=13 Tax=Chlamydiaceae RepID=RNC_CHLFF Length = 237 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 9/226 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANA 55 N I I ++ KL +TF +LL ALTH S ++ +ERLEFLGD++L ++ Sbjct: 3 NLINIKEVEAKLKFTFTQPQLLVTALTHPSYRNETVTITEDSERLEFLGDAVLCLIVTEH 62 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ FP +DEG +S RA L+ + + LGE L +G GE R S A+ Sbjct: 63 LFLLFPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLLIGKGERIQNERGRTSAYANL 122 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EA++G V+LD + ++ + ++ D +PK RLQ+ Q + LP Y Sbjct: 123 FEAILGAVYLDGGLAPARQITVPLLPSKKD--ILPLMLGNPKNRLQQLTQKQLRTLPVYQ 180 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 + I V+ G S+++AE+ AA++AL Sbjct: 181 STPWISPQGAPGYHIRVIVND-EIWGEGFALSKKEAEKLAAQEALD 225 >UniRef50_A4GHU1 Ribonuclease III n=1 Tax=uncultured marine bacterium EB0_39H12 RepID=A4GHU1_9BACT Length = 218 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 12 KLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRM 71 L Y+F +EL Q ALTH+S SS +NERLEFLGD+IL+ ++ L++ + + EG ++R Sbjct: 8 NLEYSFQDEELFQLALTHKSLSSHNNERLEFLGDAILNLYVSERLFNTYGNLKEGKLTRF 67 Query: 72 RATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 +A++V L +A EL ++LG GE G SIL + +EALIG +FLDSD Sbjct: 68 KASIVSRENLHRVAINLELSNHIKLGKGESLQGN----SILGNVLEALIGAIFLDSDYSE 123 Query: 132 VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 + ++ N ++ ++ ++ KDPK+ LQE +Q ++ LP Y + + + + +F + Sbjct: 124 TKNVLDNIFKDDFLKLVEEEELKDPKSTLQELIQKQYQSLPIYSLNEQISDKKENQFEVT 183 Query: 192 CQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 C V + G G++R+ AE AA L+ ++ + Sbjct: 184 CSVVEGNLVTQGKGNTRKGAELNAASNMLELIQKQ 218 >UniRef50_UPI000180B1D8 PREDICTED: similar to ribonuclease III, nuclear, partial n=1 Tax=Ciona intestinalis RepID=UPI000180B1D8 Length = 1224 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 13/229 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA-----SSKHNERLEFLGDSILSYVIANALYHRF 60 + + + +G FNH LL +A T R+ + HN+RLEFLGDS+ + V + L+ + Sbjct: 963 LTKFEDSIGVKFNHIRLLAKAFTWRNVHENILTHGHNQRLEFLGDSVCNLVASAYLFKLY 1022 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGF--RRESILADTVEA 118 P EG ++ +RAT+V G T + +A E + E + + RE LAD +EA Sbjct: 1023 PTHHEGHLTLLRATVVNGRTQSLVATELGMPEYVICTLDNDSTERVPEWREKNLADLLEA 1082 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPT 173 + +F+D ++ V+ + + RL E + DPK+ LQ+ +G+ LPT Sbjct: 1083 FVAALFIDKGLKYVKTFMKICFFPRLKEFILTQEWNDPKSCLQQCCLTLRQEGKEPQLPT 1142 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 Y + G +H +++ + G E GTG S ++AE+ AA AL + Sbjct: 1143 YEISHQTGPSHSRKYVVTVHFKG-EEIGKGTGESIQRAERNAARTALNQ 1190 Score = 119 bits (300), Expect = 6e-26, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 2/128 (1%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 +HNERLEFLGD+++ Y + L+ FP + EG ++ R LV LA LA +L E + Sbjct: 819 EHNERLEFLGDAVVGYFTSVHLFLLFPDLSEGALTTFRTVLVNNQHLALLAERLQLDEFM 878 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQK 154 G +A+ EAL+G +++++ ++ ++L + E + Sbjct: 879 LYAHGPDLCRKADLRHAMANCFEALMGAIYMEAGLERAQRLFGEFLWET--EALQRVWRS 936 Query: 155 DPKTRLQE 162 P +LQE Sbjct: 937 LPLHQLQE 944 >UniRef50_B9L2H4 Ribonuclease III n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2H4_THERP Length = 252 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 107/211 (50%), Gaps = 13/211 (6%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSKH-----------NERLEFLGDSILSYVIANALYH 58 LG F +LL+QALTH S + NERLEFLGD++L +++ LY Sbjct: 22 MEALGIAFRRPDLLRQALTHLSYVYERSRSTQAAVEEANERLEFLGDAVLELLVSEFLYR 81 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFR-RESILADTVE 117 RFP EG+++ RA LVR TLA AR F L E L LG E+ G RE ILA E Sbjct: 82 RFPTASEGELTAYRAALVRTPTLARWARRFRLDEFLYLGRSEVPRPGRPVRERILAGAFE 141 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A++G ++LD I+ V + + + + + ++ K RLQE +Q R P Y + Sbjct: 142 AVLGALYLDRGIRVVRRFLHRLLLEEAEGLIAIGQNENYKGRLQELIQDRLRITPVYRTI 201 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 V G AH + FT + G VG G S+ Sbjct: 202 AVTGPAHQRTFTAEVLI-GERPYGVGHGPSK 231 >UniRef50_C8NZK7 Ribonuclease III n=4 Tax=Erysipelotrichaceae RepID=C8NZK7_ERYRH Length = 226 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 8/211 (3%) Query: 19 HQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMR 72 +++L+ A H S ++ NERLEF+GD++L ++ L+ +EGDM+ R Sbjct: 16 NKDLINNAFIHSSYVNEAEELLEDNERLEFMGDAVLQICVSERLFKHQDHFNEGDMTLYR 75 Query: 73 ATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 A LV + LA+ + + +L + L LG GE K+GG R SI+AD E+ IG ++LDS I +V Sbjct: 76 AKLVCEDALAQYSLKLKLNDYLMLGMGEEKNGGRVRVSIIADLFESFIGALYLDSGIDSV 135 Query: 133 EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHC 192 +++ + +E+ D KT+LQEY+Q +Y V+ V G ++ EF + Sbjct: 136 NRVLDSVMNDAFNEL-ESLSITDYKTKLQEYIQSDSRKSVSYEVINVVGPSNAPEFEVVV 194 Query: 193 QVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 ++ L G G S++KAEQ AA+ A +KL Sbjct: 195 KLDEL-IFGQGKGLSKKKAEQMAAKDAFEKL 224 >UniRef50_D0WEA4 Ribonuclease III n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEA4_9ACTN Length = 312 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 ++ Q +G F+ ++L A+TH SA+ ERLEFLGDSIL ++AN +H + Sbjct: 11 LDLAQHVIGVAFDDIDILLAAITHPSATEGKPVKFSYERLEFLGDSILGAIVANEAFHAY 70 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P +DEG ++R++ LV G++L+++A + + + G E +G S L + EAL+ Sbjct: 71 PEIDEGGLTRIKVALVSGSSLSDVAAKLGFADIIVFGSSERGTGRRGLHSALENVYEALV 130 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 +FLD + + R+D I + ++PK+ LQE LQ + PTY +V+ + Sbjct: 131 AALFLDKGMDGARDFVRRTLIPRMD-IEMAREPENPKSALQEKLQEEGIT-PTYKLVETQ 188 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD+ F +GL+ G G +++++E AA+ AL ++ + Sbjct: 189 GPPHDRTFVSQV-FAGLTALAQGIGRTKKESESQAAKAALDMIDAD 233 >UniRef50_A9BIG2 Ribonuclease III n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIG2_PETMO Length = 253 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 19 HQELLQQALTHRSASSKH---------NERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 + +L +AL H+S + NERLEFLGD++L VI+ LY+ + + EG+MS Sbjct: 31 KESVLFEALCHKSYVFDNENIQRKLDSNERLEFLGDAVLELVISEFLYNNY-HLSEGEMS 89 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 + RA + LAE+A + L + + L GE K GG ++SIL+DT+EAL ++L Sbjct: 90 KARAIIGSEIILAEVALKLRLDDFIFLSKGEDKQGGRTKKSILSDTMEALFACIYLSCGY 149 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 + +K I+ + ++ G+ D KT+LQE Q + LP Y+++ G +H + + Sbjct: 150 EKAKKYIIKNMKEYIENAVEGNIFLDYKTKLQELTQEKTKKLPEYVLLSASGPSHMKRYK 209 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 + ++ +G G S++ AEQ AA+ A +K Sbjct: 210 VAVKLDD-EILGIGEGFSKKFAEQLAAKIACEK 241 >UniRef50_C1F8X7 Ribonuclease III n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8X7_ACIC5 Length = 302 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 47/266 (17%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASS----------------------------KHNE 38 L+ LGYTF + LL +ALTH S + + NE Sbjct: 18 AELEAALGYTFQDKGLLARALTHSSLAYEQTAQTATPAAARATGKSSEARTRRSPLEDNE 77 Query: 39 RLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGP 98 +LEFLGD++L ++A ALY P + EG ++R+R+ LV + ++A LG LR+G Sbjct: 78 QLEFLGDAVLGLIVAEALYRAHPEMSEGQLTRLRSALVSRKHMGQVAHRLHLGTYLRMGR 137 Query: 99 GELKSGGFRRESILADTVEALIGGVFLDS---------DIQTVEKLILNW-----YQTRL 144 GE +SGG ++ ++LA+ EALI V+LD+ + +I + L Sbjct: 138 GEERSGGRKKPALLANAAEALIAAVYLDAAGITGPCETALTAARAIIERHVIEPSLPSLL 197 Query: 145 DEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL-----SE 199 E S G D K+ LQE+LQ H P Y+V G H + F + ++ G + Sbjct: 198 QEASRGTSIGDHKSALQEFLQSEHRGQPEYVVTGQSGPDHHKRFLVEVRLPGKAGAPGTA 257 Query: 200 PVVGTGSSRRKAEQAAAEQALKKLEL 225 G G +++ AEQ AA +AL+KL+ Sbjct: 258 LARGIGGTKKHAEQEAARRALRKLQA 283 >UniRef50_C5CGL9 Ribonuclease III n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGL9_KOSOT Length = 249 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 117/214 (54%), Gaps = 11/214 (5%) Query: 19 HQELLQQALTHRSASSK---------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 E + +AL H S +++ NERLEFLGD++L+ +A+ LY + VDEG MS Sbjct: 20 DTEWIFKALCHSSYANEVVRKGMNVESNERLEFLGDAVLALSLADLLYREY-DVDEGVMS 78 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 + RA + LAE+AR +GE L LG GELK+GG R+SILAD EA++G ++L Sbjct: 79 KTRAVVASEKVLAEVARNMNIGEYLLLGKGELKTGGRGRDSILADAFEAILGALYLSEGF 138 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 + + +++ + D KT LQE QG P Y ++ G ++ F Sbjct: 139 EIARNFVKEKLGIYIEKALNKELVLDYKTTLQELTQGNLGVRPEYSYIENIGTPQNKLFH 198 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + +V+G + VG G +++ AEQ AA +A +KL Sbjct: 199 VEVRVNGKA-LAVGYGKTKKAAEQDAARKAYEKL 231 >UniRef50_A4WVP5 Ribonuclease 3 n=44 Tax=Rhodobacterales RepID=RNC_RHOS5 Length = 229 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 6/212 (2%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALYHRFP 61 + + ++G+ F + L +A+TH S SS N+RLEFLGD +L V+A AL Sbjct: 6 DLRAFESRIGHAFREPDRLLRAVTHASLSSATRPDNQRLEFLGDRVLGLVMAEALLAADK 65 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG ++ LVR T A +ARE LG+ L+LG E+ SGG R+E++L D +EA+I Sbjct: 66 AATEGQLAPRFNALVRKETCAAVAREVGLGDVLKLGRSEMMSGGRRKEALLGDALEAVIA 125 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+LD+ + +L+L + R+ ++ +D KT LQE+ Q R LP P Y V G Sbjct: 126 AVYLDAGFEAARRLVLRLWGERIAQVEADA--RDAKTALQEWAQARGLPPPCYEAVDRSG 183 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 H FT+ ++ G E ++R AEQ Sbjct: 184 PDHAPIFTVEVRL-GNGETERSAAGTKRVAEQ 214 >UniRef50_Q7KNF1 Drosha n=21 Tax=Neoptera RepID=Q7KNF1_DROME Length = 1327 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 16/228 (7%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + + +G F H LL +A T RS H N+RLEFLGD++L + + LY F Sbjct: 975 LTKFEDSIGIKFKHIRLLARAFTDRSIGFTHLTLGSNQRLEFLGDTVLQLICSEYLYRHF 1034 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG +S +R++LV T A + + + + + R AD +EA + Sbjct: 1035 PEHHEGHLSLLRSSLVNNRTQAVVCDDLGMPKYAVYANPKADLKTKDR----ADLLEAFL 1090 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL------QGRHLPLPTY 174 G +++D + E+ RL DPK++LQ+ G +P Y Sbjct: 1091 GALYVDKGLLYCEQFCHVCLFPRLQLFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPYY 1150 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 VV+ G + + + + +GSS ++AE AA+QAL+ Sbjct: 1151 KVVEASGPTNTRVYKVAVYFR-SKRLATSSGSSIQQAEMNAAKQALEN 1197 Score = 98.7 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 2/145 (1%) Query: 36 HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLR 95 HNERLEFLGD+++ ++ + L+ FP ++EG ++ RA +V+ LA LA++ +L E + Sbjct: 831 HNERLEFLGDAVVEFLSSIHLFFMFPELEEGGLATYRAAIVQNQHLALLAKKLQLEEFML 890 Query: 96 LGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKD 155 G +A+ EAL+G + LD I+ +++ + R DE + Sbjct: 891 YAHGSDLCHELELRHAMANCFEALMGALLLDGGIKVADEVFTDALF-RQDEKLLSIWKNL 949 Query: 156 PKTRLQEYL-QGRHLPLPTYLVVQV 179 P+ LQE G + +Y V++ Sbjct: 950 PEHPLQEQEPLGDRSCIDSYRVLKE 974 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN 37 ++ L+ +GY F ++ LLQ ALTH S ++ Sbjct: 743 LDLLEESIGYRFKNRYLLQLALTHPSY-KENY 773 >UniRef50_D1B5N5 Ribonuclease III n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5N5_THEAS Length = 226 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 15/210 (7%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHR 59 + LQ ++GY F +LL +ALTH S +++ NERLEFLGDS+L +A LY R Sbjct: 10 ALEELQDRVGYRFADTQLLIEALTHSSFANQAQLGYCNERLEFLGDSVLGLCVAEELYRR 69 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 P EG ++++++T V + LA R L LR+G G E ++AD +EAL Sbjct: 70 HPSEREGRLTKLKSTGVSSHNLARSGRVLGLDRVLRVGKA---IKGGPSEGMVADAMEAL 126 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG V+LD ++ ++ +DPK+ LQE Q +PLP+Y +V+V Sbjct: 127 IGAVYLDGGLEAARGIVSRHV------SLDSLSSQDPKSALQEMAQRLGIPLPSYRLVEV 180 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 RG H F + + G VG G SRR Sbjct: 181 RGPEHRATFVVQVWLKG-ELMGVGNGGSRR 209 >UniRef50_Q8G7H1 Ribonuclease 3 n=20 Tax=Bifidobacteriaceae RepID=RNC_BIFLO Length = 242 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 118/229 (51%), Gaps = 9/229 (3%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALY 57 P N L LG T + +LL QALTHRS S +H ERLEFLGD++L V L+ Sbjct: 9 PTPANELLEALGTTLS-PDLLVQALTHRSFSHEHPGVANYERLEFLGDAVLELVSTETLF 67 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAR-EFELGECLRLGPGELKSGGFRRESILADTV 116 P + EG +++MRA V + L+ +A+ + ++G + LG GE + GG + SIL D V Sbjct: 68 TIHPDMTEGQLAKMRAKAVSEDALSAIAKTKLKVGPYILLGHGEAEQGGAEKNSILCDIV 127 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 E+LIG FL+ I K+I L E++ D KT L G P Y Sbjct: 128 ESLIGATFLEHGIDEARKVIHRLIDDTLAEVATEGPALDWKTSLTVKAHGLGKEEPVYH- 186 Query: 177 VQVRGEAHDQEFTIHCQV-SGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 ++V G + Q FT + +G GSS+RKA+ AAAE K L+ Sbjct: 187 MEVSGPEYAQIFTARVSLGENGDIIGIGKGSSKRKAQLAAAEAGWKSLD 235 >UniRef50_C7MDJ8 RNAse III n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDJ8_BRAFD Length = 250 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 111/209 (53%), Gaps = 8/209 (3%) Query: 18 NHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMR 72 LL+ +LTHRS S + HNERLEFLGD++L + LY P + EGD++R R Sbjct: 31 QDSGLLELSLTHRSYSYENDGLPHNERLEFLGDAVLQLAVTEHLYAAHPTLPEGDLARRR 90 Query: 73 ATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 A V LA +A + +LG +RLG GE +GG + SILADT EA+IG V L Sbjct: 91 AATVSTRALAVIASKLDLGAYVRLGRGEDLTGGRAKASILADTTEAVIGAVHLALGQDVS 150 Query: 133 EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHC 192 + +L+ + LD + D K+RLQE + TY + G H + +T Sbjct: 151 RRFVLDLLRPLLDSDEFLEAGYDFKSRLQEIAAAEGENV-TYAL-SESGLEHQKVYTATV 208 Query: 193 QVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 V G+ G G+S++ AE AAA+ A++ Sbjct: 209 TVPGI-VTARGDGASKKDAELAAAQNAVR 236 >UniRef50_B4S3N5 Ribonuclease III n=2 Tax=Chlorobiaceae RepID=B4S3N5_PROA2 Length = 277 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 12/204 (5%) Query: 21 ELLQQALTHRSASSK-----------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 ++ + A THRS N+RLEFLGD++L +I+ LY FP DEG +S Sbjct: 56 DIYKTAFTHRSFVHDQHQGSSPAPFDSNQRLEFLGDAVLDLIISEHLYKLFPESDEGALS 115 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 R+ +V +LA+ A+ LG L +G + + E+ +AD EALIG ++LD + Sbjct: 116 STRSKIVNRKSLADFAQAIALGNQLIIGESADEEKIRKSEATMADAFEALIGAIYLDKGL 175 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 V++ I + T +D + + K+RL E+ Q L P Y +++ G H + FT Sbjct: 176 PAVQRFIDDHVMTIVDVPKLATIEHNHKSRLIEFAQANQLSHPQYTIIREEGAEHQKTFT 235 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQ 213 + G GT + ++ AEQ Sbjct: 236 VEVSFDGKP-FGTGTAARKKDAEQ 258 >UniRef50_A0PQ48 Ribonuclease III Rnc n=2 Tax=Mycobacterium RepID=A0PQ48_MYCUA Length = 243 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 21 ELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 EL+ ALTHRS + ++ NERLEFLGD++L I + L+HR P EGD++++RA++ Sbjct: 19 ELVTLALTHRSYAYENGGLPTNERLEFLGDAVLGLTITDELFHRHPERSEGDLAKLRASV 78 Query: 76 VRGNTLAELAREF---ELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 V LA++AR LG + LG GE +GG + SILAD +E+L+G ++L ++ Sbjct: 79 VNTQALADVARHLSDHGLGAHMLLGRGEANTGGADKSSILADGMESLLGAIYLHHGMEVA 138 Query: 133 EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHC 192 + IL + LD D KT LQE R L P+Y V G H +EFT Sbjct: 139 REAILRIFGPLLDAAPTLGAGLDWKTSLQELTASRSLGAPSYAVTST-GPDHHKEFTAVV 197 Query: 193 QVSGLSEPVVGTGSS 207 V+ +E G G S Sbjct: 198 VVNN-TEYGSGVGRS 211 >UniRef50_C7RGT7 Ribonuclease III n=4 Tax=Anaerococcus RepID=C7RGT7_ANAPD Length = 239 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 8/209 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59 I + K+GYTFN ++L+ A TH S +++ NERLEFLGDSIL +++ L+ Sbjct: 11 IEEFENKIGYTFNDKDLIDVAFTHSSYTNEVKGKKKSNERLEFLGDSILDMIVSEVLFKH 70 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 + EG +++ R+ LV ++ A+ +FE+ L G GE + GG ++ + ADT EA+ Sbjct: 71 YSMKPEGWLTKTRSRLVCTSSFAKACEKFEMTTFLNFGNGERQGGGELKKHVKADTFEAV 130 Query: 120 IGGVFLDSDIQTVEKLILNWYQTR-LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++LDS + K + Y+ L+ I+ D KT+LQEY + + Y++V+ Sbjct: 131 CAAIYLDSSYDNLFKFLKENYKEEALEIINDDSIFNDYKTKLQEYHNAKDRKILKYVLVK 190 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 G H++ FT+ ++ G G G + Sbjct: 191 EEGPEHEKTFTMAVKL-GNKVLAHGVGKN 218 >UniRef50_A9FII1 Ribonuclease III n=2 Tax=Deltaproteobacteria RepID=A9FII1_SORC5 Length = 275 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 19 HQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRM 71 L++ALTH S S++ N+RLEFLGD++L + L RFP EG++S M Sbjct: 17 DLPHLEEALTHPSFSNEQRGGRRVDNQRLEFLGDAVLGLCVTELLMERFPGAREGELSMM 76 Query: 72 RATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 R+ LV + LA AR ELG LR+G G +G + ++LAD EAL+ ++LD ++ Sbjct: 77 RSALVNTDALAAWARGIELGAALRVGRGAEVAGERDQTNVLADATEALVAALYLDRGFES 136 Query: 132 VEKLILNWYQTRLDEISPGDKQ-KDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 L + L +++ G +D K+ LQE +Q R P Y ++ G HD+ F + Sbjct: 137 ARALSRKIAASPLAQLASGSLLGRDAKSELQERVQARGAASPRYRLMGTEGPDHDRAFLV 196 Query: 191 HCQVSGLSEPVVGTGSSRR 209 +V G G G S++ Sbjct: 197 AVEVDG-QVIGTGRGRSKK 214 >UniRef50_A3EQH6 Ribonuclease III n=3 Tax=Leptospirillum RepID=A3EQH6_9BACT Length = 377 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 36/257 (14%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIAN 54 P L R LG F +++ALTHRSAS + + ERLEFLGD ++ +++ Sbjct: 15 PRAPEHLIRILGLPFKPTMRIEEALTHRSASHERGRKTPIPNYERLEFLGDRVIGLIVSE 74 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 L + +P EGD+ ++ + +V TLA +AR +LG + LG G SG S+LAD Sbjct: 75 YLLNTWPSASEGDIGQIFSGIVSTQTLASIARRMDLGSYMILGKGSHSSGDRENSSLLAD 134 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWY-QTRLD--------------------------EI 147 T E+L ++L+ ++T ++++ W+ Q ++ Sbjct: 135 TFESLAAAIYLEYGLETCRQVLIPWFTQPLIEIVQKIENLREIRDSSSGPGSSVIATQPA 194 Query: 148 SPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 P + K LQ++ Q + LP Y V++ G AH + F + + G + G++ Sbjct: 195 PPRAGSLNYKLLLQKWCQSKAEELPVYQVLEEIGPAHQRRFRLGVFLKG-KQLGEAEGTT 253 Query: 208 RRKAEQAAAEQALKKLE 224 +R A AA+ A ++++ Sbjct: 254 KRGASVHAAKNAWERIQ 270 >UniRef50_A8QES5 RNase3 domain containing protein n=1 Tax=Brugia malayi RepID=A8QES5_BRUMA Length = 1329 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 13/230 (5%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHR 59 ++ L++ +G TF H +L +A T R+ HN+RLEFLGD++L + + LY Sbjct: 1016 LLTELEKNIGITFKHIRVLAKAFTRRNIGFNNLTLGHNQRLEFLGDTVLQLITTDYLYKH 1075 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSG-GFRRESILADTVEA 118 FP EG +S +R LV T + + + + + L KSG R AD VEA Sbjct: 1076 FPYHHEGHLSILRTCLVSNRTQSVICDDIGMTKYLVTPKVMQKSGMPVLRVKDKADLVEA 1135 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL------QGRHLPLP 172 +G +++D + + RL DPK++LQ+ G +P Sbjct: 1136 FLGALYVDRGFDYCKVFCRICFFPRLKFFIIAQHWNDPKSQLQQCCLTLRQMDGGEPDIP 1195 Query: 173 TYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 Y + V G + + + + VG G + + A+ AAE AL K Sbjct: 1196 EYRTIAVEGPTNTRIYKVAVYFR-KKRLAVGCGHTMQLAQMRAAENALIK 1244 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 57/102 (55%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ L++ F +DEG ++ R+T+V+ LA LA++ L E + Sbjct: 872 NHNERLEFLGDAVIEFITTIHLFYMFSELDEGGLATYRSTMVQNKNLALLAKKIGLDEFM 931 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLI 136 G +A+ EA++ ++LD+ I +++ Sbjct: 932 LYAHGPDLCHESDLRHAMANAFEAMMAAIYLDAGIDECDRIF 973 Score = 44.0 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 17/27 (62%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSKH 36 Q ++ Y F ++ LL+ ALTH S + + Sbjct: 786 QERIHYVFKNRSLLELALTHPSYRTNY 812 >UniRef50_B2UPF8 Ribonuclease III n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UPF8_AKKM8 Length = 231 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 109/209 (52%), Gaps = 6/209 (2%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFP 61 L+ KLGY FN+ +LL QALTH S SK ERLEFLGD+IL + LYH P Sbjct: 4 TALEDKLGYRFNNPDLLVQALTHPSTDSKPETRRAYERLEFLGDAILQLAVTQYLYHHMP 63 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG+++++RA V L + L + + LG GE ++GG + SI+A+T E++ G Sbjct: 64 QSPEGELTQLRARTVSRANLGKYGFILGLDKHIALGKGEERAGGRGKNSIIANTFESVFG 123 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 + LDSD +T + + L LD + K+ +PK LQ LQ P+Y + Sbjct: 124 AMSLDSDYETAKAVALRVLHEALDSAASHPKEINPKGELQAILQDILPETPSYETEEKGP 183 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 + F G + G+G+S+RK Sbjct: 184 RDAENRFESRVFWHGHA-IGAGSGASKRK 211 >UniRef50_Q2RJX2 Ribonuclease 3 n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RNC_MOOTA Length = 233 Score = 199 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 7/190 (3%) Query: 23 LQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVR 77 L ALTH + + +H N+RLEFLGD++L V+A LY FP++ EGD++RMRA +V Sbjct: 26 LDLALTHPTYAFEHHLPGDNQRLEFLGDAVLGLVVATYLYQHFPQLPEGDLTRMRAAVVC 85 Query: 78 GNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLIL 137 +L ++AR +G+ LRLG GE SGG R S LAD +EA+IG V+L + +L Sbjct: 86 EASLVKVARRLRVGDLLRLGQGEEHSGGRERPSNLADAMEAIIGSVYLSGGYELARDFVL 145 Query: 138 NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL 197 + L EI D K+ LQE++Q + Y +++ G H + + + Sbjct: 146 QIFTPAL-EILSDTSFIDSKSALQEFVQSQGTENVVYKILEEWGPDHAKGYKAGVFLKN- 203 Query: 198 SEPVVGTGSS 207 G G S Sbjct: 204 RLLATGLGHS 213 >UniRef50_O01326 Ribonuclease 3 n=3 Tax=Caenorhabditis RepID=RNC_CAEEL Length = 1086 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 15/228 (6%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPR 62 L+ +LG FN+ LL +A T R+ + HN+RLE+LGDS+L ++++ LY RFP Sbjct: 835 ALEERLGIQFNNIRLLAKAFTRRNIPNNDLTKGHNQRLEWLGDSVLQLIVSDFLYRRFPY 894 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG MS +R +LV T A + + E + P + + + AD VEA IG Sbjct: 895 HHEGHMSLLRTSLVSNQTQAVVCDDLGFTEFVIKAPYKTPELKLKDK---ADLVEAFIGA 951 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP------LPTYLV 176 +++D I+ I + RL +K D K+ LQ++ P +P Y V Sbjct: 952 LYVDRGIEHCRAFIRIVFCPRLKHFIESEKWNDAKSHLQQWCLAMRDPSSSEPDMPEYRV 1011 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + + G +++ F I G S+ KAE AE AL LE Sbjct: 1012 LGIEGPTNNRIFKIAVYYKGKRLASAAE-SNVHKAELRVAELALANLE 1058 Score = 109 bits (272), Expect = 9e-23, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 55/209 (26%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------------------------------ 35 ++ + + Y FN + +++ AL H S S Sbjct: 607 LDVFEEVIEYKFNDRRVIELALMHSSFKSHYGTPIDHVKNMITNCGYRRKYGAEDKREKK 666 Query: 36 ----------------------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRA 73 HNERLE+LGD+++ ++++ LY EG ++ R Sbjct: 667 RVAGIMSLFNIMKGTSGGEPILHNERLEYLGDAVVELIVSHHLYFMLTHHFEGGLATYRT 726 Query: 74 TLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVE 133 LV+ LA LA+ + E L+ G + LA+ EA++ ++LD + + Sbjct: 727 ALVQNRNLATLAKNCRIDEMLQYSHGADLINVAEFKHALANAFEAVMAAIYLDGGLAPCD 786 Query: 134 KLILNWY---QTRLDEISPGDKQKDPKTR 159 + Q L E + + K Sbjct: 787 VIFSKAMYGHQPVLKEKWDHINEHELKRE 815 >UniRef50_C5NVE5 Ribonuclease III n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVE5_9BACL Length = 237 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 130/229 (56%), Gaps = 9/229 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALY 57 ++N L + G+ E + + +H S +++ + ERLEFLGD+++ + L+ Sbjct: 9 LLNNLNEEYGFNLKFSENFKNSFSHSSYTNEKRIAKHLNYERLEFLGDAVVELTTSEFLF 68 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +F + EG+++++RA++V TL + A + L +C+ LG GE K GG R ++LAD E Sbjct: 69 KKFSELPEGELTKLRASIVCEKTLVKYALQLSLDKCIYLGKGEEKMGGRSRAALLADIFE 128 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 + G ++L+S+++ V+ + N T + ++ D KT LQEY+ L Y+V+ Sbjct: 129 SFTGAMYLESNLEVVKTFLNNTLFTEVQDL-EYHSFVDYKTILQEYISKIKLGEIEYVVL 187 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G +H + FT + G + GT ++++++EQ +A+QAL+KLE + Sbjct: 188 DSSGPSHSKTFTSAVLI-GRKQYGSGTATTKKESEQLSAKQALEKLEYK 235 >UniRef50_B1XKP4 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XKP4_SYNP2 Length = 258 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 13/199 (6%) Query: 17 FNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 F LL QALTHRS +++ NERLEFLGD++L +++ LY R+P EG++SR Sbjct: 7 FQRSPLLLQALTHRSFANEQPETIQDNERLEFLGDAVLKFIMGKLLYERYPDFQEGELSR 66 Query: 71 MRATLVRGNT-LAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 +RA+L LAE A+ L + LRLG G K G + IL++T EA++G FLD+ I Sbjct: 67 LRASLENNRHQLAEFAQVLGLDQILRLGKGAEKEGARQNPEILSNTFEAVVGAYFLDAGI 126 Query: 130 QTVEKLILNWYQT---RLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + + RL + ++ K +LQE+ H +P Y + G H + Sbjct: 127 EAAIAFVETLVIPVADRLVQQPSDPLAQNFKGQLQEWALANHGEIPKYKTLNESGADHAK 186 Query: 187 EFTIHCQVSGLSEPVVGTG 205 FT+ + G G G Sbjct: 187 TFTVAVYLQGQE---WGRG 202 >UniRef50_C4Q7C6 Ribonuclease III, putative n=2 Tax=Schistosoma mansoni RepID=C4Q7C6_SCHMA Length = 1577 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 13/225 (5%) Query: 9 LQRKLGYTFNHQELLQQALTHRS-----ASSKHNERLEFLGDSILSYVIANALYHRFPRV 63 L+ LG F H +L +A+T R + N+RLEFLGDS+L YV + L+ FPR Sbjct: 1111 LEDTLGIKFKHLRVLARAMTIRKTGFNFYTLGDNQRLEFLGDSLLKYVSTDYLFRHFPRH 1170 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESI--LADTVEALIG 121 EG +S ++ +LV T A + E L + + +++ AD +EA IG Sbjct: 1171 HEGHLSLLKNSLVNKYTQASVCSELGLEHYVIHRNKNDNCNNSQNQNVKYRADLLEAFIG 1230 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYLV 176 +F+D D+ VE+ + RL E + D K++LQ+ + Y V Sbjct: 1231 ALFVDKDLAWVERFCQICFWPRLVEFILKQEWNDAKSKLQQCCLTFRSLNEDPEIAHYKV 1290 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 ++ G + + + + G G G S ++A+ AA++AL+ Sbjct: 1291 LEHSGPTNQRVYRVGVYFRG-QRLATGEGRSVQQAQMEAAKKALE 1334 Score = 116 bits (290), Expect = 8e-25, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 75/218 (34%), Gaps = 60/218 (27%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH---NE-------------------RLE-- 41 + L+ +LGYTFN + LL Q+LTH S + N+ +LE Sbjct: 875 LESLENRLGYTFNDKSLLHQSLTHPSYRRTNFGTNQDHFQNSLVSCGPRILEYGDKLELY 934 Query: 42 -----------------------------------FLGDSILSYVIANALYHRFPRVDEG 66 FLGD+++ + + L+ FP + EG Sbjct: 935 KAWRKKGLTKMIQVMSFLPKMHEERSNIYGNERLEFLGDAVVEVISSIHLFFMFPELSEG 994 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 + R +V+ LAELA + + L +D EAL+ + LD Sbjct: 995 HLDAYRQAIVQNQHLAELAVRLGIHKYLLYTHSVDFCYDSTFIYARSDAFEALMAAITLD 1054 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL 164 + + V+++ DE + P LQ Sbjct: 1055 AGLDIVDRIFGAVLFGD-DERIHRVWVQIPLHPLQSQC 1091 >UniRef50_Q1GTU3 Ribonuclease 3 n=1 Tax=Sphingopyxis alaskensis RepID=RNC_SPHAL Length = 226 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 96/208 (46%), Gaps = 3/208 (1%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61 +P+ L +G + L ALTH S +RLEFLGD +L V+A+ LY RFP Sbjct: 3 DPLNTEALADIIGCIPDDLTLYDLALTHGSTGRADYQRLEFLGDRVLGLVLASELYTRFP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG+MS L G T A +A+ +L +R G GG ++I AD +EALIG Sbjct: 63 AASEGEMSSRLHVLASGATCAAIAQRLDLPALIRFGAQARSDGGRHSDNIAADAIEALIG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +FL+ I+ IL + +D K PK LQE+ R P Y +V G Sbjct: 123 ALFLERGIEAARTFILAQWGALID--GQQAAPKHPKAALQEWALARGRRPPEYEIVSREG 180 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 H F I + G G+S++ Sbjct: 181 PDHAPRFRIAVSI-GKLARAEAQGASKQ 207 >UniRef50_A4GK15 Ribonuclease III n=1 Tax=uncultured marine bacterium HF130_81H07 RepID=A4GK15_9BACT Length = 220 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 128/222 (57%), Gaps = 7/222 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVD 64 +L++ LGY+F +E L +ALTH S S ++NE EFLGDS+L+ +I+ L +F D Sbjct: 4 DFKKLEKNLGYSFQKKETLVKALTHVSKSKENNEVFEFLGDSVLNLIISQILVEKFSMDD 63 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG +S MR+ LV TL ++A++ EL + G +G E+IL +++EA+ G V+ Sbjct: 64 EGTLSLMRSKLVSRTTLNKIAKKLELDSFIVKGDS--LAGQETPENILGNSLEAIFGAVY 121 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 +S ++ ++K+I + ++ + G+ K+ KT LQEY Q LPTY Q+ + + Sbjct: 122 KESGLEFIQKIIETTFAKEIELLREGNL-KNSKTLLQEYCQKNKFSLPTYN--QIEKKEN 178 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 F + C++ S G G S + AEQ AA + LKK+ ++ Sbjct: 179 IYPFIVTCKLDDSS--SEGFGKSLKLAEQDAAARLLKKIGVK 218 >UniRef50_UPI0001C41B85 ribonuclease III Rnc n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B85 Length = 232 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 8/222 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHRFPRVD 64 + K N EL + A TH S +SKH ERLEFLGDS+L+ + + L + P Sbjct: 3 ILNKFDIVPNDMELYETAFTHSSYASKHHLNDYERLEFLGDSVLNMLTSEFLQNMHPDFG 62 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG ++++RA V N L + EF L +C++L + SI AD E+ +G ++ Sbjct: 63 EGKLTKLRANYVCQNALIVYSHEFGLDKCVKLNLEDNALTDNEVISITADVFESFLGAIY 122 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 LD I ++ + ++ + D K+ ++EY + TY +++ G H Sbjct: 123 LDQGISKCKEFLTITVFPYIE--NEQIFFHDYKSTIKEYGDAIDKEI-TYELIEEHGAPH 179 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 D+ F + + G+ + G G S+++AEQ AA A+K L L+ Sbjct: 180 DKTFVMKILIDGV-DFGHGVGKSKKEAEQVAACNAIKTLRLD 220 >UniRef50_Q8Z023 Ribonuclease 3 n=10 Tax=Cyanobacteria RepID=RNC_ANASP Length = 228 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 10/203 (4%) Query: 17 FNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 F +LL++ALTHRS ++ HNERLEFLGD+IL+++ LY P E +++R Sbjct: 7 FRDDKLLRRALTHRSYVNENPEEGEHNERLEFLGDAILNFLSGEYLYRSHPDRGEDELTR 66 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD--SD 128 R+ LV LA+ A E L +RLG G ++ GG++ ++L+ T EA+IG +LD S+ Sbjct: 67 RRSALVDEKQLAKFAIEVGLDFKMRLGKGAIRDGGYQNPNLLSSTFEAVIGAYYLDNNSN 126 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGR-HLPLPTYLVVQVRGEAHDQE 187 I+ V +I +++ ++I D K R QE++Q P YL Q+ G +H E Sbjct: 127 IEAVRAIIEPLFESVPEQIVVVRSNVDSKNRFQEWVQRNIGPTPPKYLTEQIGGFSHAPE 186 Query: 188 FTIHCQVSGLSEPVVGTGSSRRK 210 F V G E G G +++ Sbjct: 187 FKATVLV-GEKEYGEGIGKNKKD 208 >UniRef50_C6XX79 Ribonuclease III n=4 Tax=Sphingobacteriaceae RepID=C6XX79_PEDHD Length = 242 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 11/230 (4%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASS-------KHNERLEFLGDSILSYVIAN 54 + + I +L+ LG+ + L + A HRS + NERLEFLGD++L VIA Sbjct: 14 DKVFIRKLKNILGFVPGNATLYKMAFRHRSVAKILKNGSRSSNERLEFLGDAVLGSVIAE 73 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 L+ +P +EG ++ MR+ +V L +LAR+ + + + + S+L D Sbjct: 74 LLFKSYPYKEEGFLTEMRSKIVNRANLNQLARKMGFDQLIVFDQKAVNVQ-TKHHSMLGD 132 Query: 115 TVEALIGGVFLDSDIQTVEKLIL-NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 EALIG V+LD + +L + +D + + + K++L E+ Q RH T Sbjct: 133 AFEALIGAVYLDKGYNFTREFLLKRIVKPYIDIHTLELTETNFKSKLIEWCQ-RHGKDIT 191 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + +++ + FTI V G S +G +++ AE+ AAE+A + L Sbjct: 192 FDMMENEEGESAKLFTIQAVVEGESY-GIGRDYNKKNAEKLAAEKACEAL 240 >UniRef50_A9T140 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T140_PHYPA Length = 1275 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 100/249 (40%), Gaps = 30/249 (12%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSA---SSKHNERLEFLGDSILSYVIANALY 57 ++ ++ L+ L Y F ++ LL +ALTH S S +RLEFLGD++L ++I Y Sbjct: 694 LSEAKVSELEILLNYKFQNKGLLVEALTHASCRRHSGDCYQRLEFLGDAVLDFLITKHFY 753 Query: 58 HRFPRV--DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK------------- 102 + D G ++ +R+ V A +A L L +L Sbjct: 754 ANSANLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARVDKYVHGSTTD 813 Query: 103 -----SGGFRRESILADTVEALIGGVFLDSDI--QTVEKLILNWYQTRLDEISPGDKQKD 155 G +L+D VE+L G VFLDS TV + + + +P + + Sbjct: 814 AQCHGWNGDSGPKVLSDLVESLAGAVFLDSGYKLDTVWNVFKQLLKPLV---TPATLRLE 870 Query: 156 PKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAA 215 P L E Q P Y + D T+ + + VG + A + A Sbjct: 871 PIRELWELCQTEKFGEPNYKKKREAMGDFDMTVTVE--LKDETITGVGRKPDEKSARKVA 928 Query: 216 AEQALKKLE 224 A QAL+ L+ Sbjct: 929 AIQALETLK 937 Score = 82.9 bits (204), Expect = 7e-15, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 67/185 (36%), Gaps = 51/185 (27%) Query: 3 PIVINRLQRKL-GYTFNHQ-----------ELLQQALTHRSASSKHN-ERLEFLGDSILS 49 P ++RL+ L F L+ +A+T + E LE LGD+ L Sbjct: 482 PSFMHRLEGLLLAVQFRKSLPSPHSSPVPANLMLEAITTSKCQESFSLEGLELLGDAFLE 541 Query: 50 YVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFEL------------------- 90 ++ L+ R+DEG++S+ R L+ L L RE + Sbjct: 542 VSVSERLFLLHNRLDEGELSKRRTNLICNKMLERLGRERGIMVSKSCRDTTRSTYKQFEI 601 Query: 91 ------GECLR---LGPGELKSGGFRRE----------SILADTVEALIGGVFLDSDIQT 131 +R P E + G RE +AD EALIG ++ ++ Sbjct: 602 MINLVSENYIRDTQFSPKEWATPGRVRETQCKLPPLQGKTIADVFEALIGAHYIHGGVEA 661 Query: 132 VEKLI 136 + ++ Sbjct: 662 AQAMM 666 >UniRef50_B0MUL3 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL3_9BACT Length = 264 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 13/216 (6%) Query: 9 LQRKLGYTFNHQELLQQALTHRSAS-------SKHNERLEFLGDSILSYVIANALYHRFP 61 + G+ ++ EL + AL H+SAS +NERLEFLGD+++ V ++ LY FP Sbjct: 23 IDELFGFVPHNIELYKLALIHKSASLVLADGRQINNERLEFLGDAVIEAVTSDYLYIEFP 82 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG ++++R+ +V +L +AR L + P +G ++ I D EA+IG Sbjct: 83 DRQEGFLTQLRSKIVSRQSLNTIARTIGLDRYVIANP----TGSTNQKHIYGDAFEAMIG 138 Query: 122 GVFLDSDIQTVEKLIL-NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD + +L++ N Y L+ + D++ D K+RL E+ Q H + V Sbjct: 139 AIYLDQGYEFANRLLINNIYYRYLNLDNLTDEETDFKSRLIEWCQKTHHTIAFETVHGRN 198 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAA 216 ++ F + G+ G G S+++AEQ AA Sbjct: 199 YSSNHPIFDATVVIDGI-RVGHGQGESKKEAEQCAA 233 >UniRef50_B6W6L3 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W6L3_9FIRM Length = 228 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 13 LGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFPRVDE 65 +GY+F ++ L+ ALTH S ++ NERLEFLGDSIL V++ LY E Sbjct: 18 IGYSFKNKNLIDVALTHSSYINESKDKNRSSNERLEFLGDSILDLVVSEELYKNHKSYPE 77 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G ++++R+ +V ++ ++ + +F L L G GE+ G ++S+ ADT EA ++L Sbjct: 78 GKLTKIRSRIVCTSSFSKASEKFNLSSYLLFGKGEISHNGREKKSVKADTFEAFCAAIYL 137 Query: 126 DSDIQTVEKLI-LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 D+ ++ + N+YQT + + D KT+LQEY + + Y + + G H Sbjct: 138 DAGYVFLKNFLMENYYQTVKELLENDLLFIDYKTKLQEYFNKTNRTILKYKLAKEEGPEH 197 Query: 185 DQEFTIHCQVSGLS 198 ++ F + Sbjct: 198 NKTFYMDVYAKNKK 211 >UniRef50_C7MY58 RNAse III n=13 Tax=Actinomycetales RepID=C7MY58_SACVD Length = 250 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRV 63 L LG ELL ALTHRS + ++ NERLEFLGD++L V+ + LY + P + Sbjct: 16 LLEALGVEI-DSELLTLALTHRSYAYENGGLPPNERLEFLGDAVLGLVVTDHLYRQHPDL 74 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPG---ELKSGGFRRESILADTVEALI 120 EG ++++RA++V + LA +AR G E +GG + SILAD +EA+I Sbjct: 75 PEGQLAKLRASVVNMHALAGVARSLGEGGLGAHLLLGKGEELTGGRDKASILADGLEAVI 134 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G V+L+ I+T L+ + L E D KT LQE L +P Y VV Sbjct: 135 GAVYLEHGIETARSLVHRLFGRLLAEAPRRGAGLDWKTSLQELTASAGLGVPEYKVVDT- 193 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSS 207 G H +EF+ V+G + G G++ Sbjct: 194 GPDHRKEFSAVVLVNG-RDLGRGDGTT 219 >UniRef50_Q1IJU6 Ribonuclease III n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJU6_ACIBL Length = 258 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 22/227 (9%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------------HNERLEFLGDSILSYVI 52 I L++ L + F QELL +ALTH S + + NE+LEF+GDS+L++V Sbjct: 6 DIAALEKALDHKFEEQELLVRALTHSSYAREQRDHIHDNSVPNDNEQLEFIGDSVLAFVT 65 Query: 53 ANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESIL 112 + L +FP EG++S++RA LV L + AR +LG+ LRLG GE +SGG + +IL Sbjct: 66 SQELVKKFPHFQEGELSKLRAYLVSARHLIQTARNLDLGKFLRLGRGEERSGGRSKSAIL 125 Query: 113 ADTVEALIGGVFLDSDIQTVEKLILN-WYQTRLD----EISPGDKQKDPKTRLQEYLQGR 167 D +EA+I ++LD ++ +K IL + L E D K+ LQE Sbjct: 126 VDALEAVIAAIYLDGGLRVAQKFILREIVRPELKRMETEHGSALPVTDYKSALQEQAHAA 185 Query: 168 HLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEP-----VVGTGSSRR 209 Y VV+ G H + FT+ ++ G +++ Sbjct: 186 GRKRIVYAVVKEEGPEHRKTFTVEARILSDGNEAPEFVARAEGPTKK 232 >UniRef50_A9NES4 DsRNA-specific ribonuclease III n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NES4_ACHLI Length = 219 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 13/221 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK----HNERLEFLGDSILSYVIANALYHRFP 61 +N L ++L H +L QALTH S + + HNERLEFLGD+++ +++ L+ Sbjct: 1 MNDLLKQLNIETKHIDLYLQALTHTSYAHENQTDHNERLEFLGDAVIELMMSTYLF-THD 59 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + ++G +++ RA VR L A++ +L +RLG GE + S++AD EA G Sbjct: 60 QSNQGVLTKRRAQAVREEALVLYAQKMDLESKMRLGNGE----QIAKPSMIADAFEAFFG 115 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +++D ++ L + + KD KT+LQE++Q L +Y V+V G Sbjct: 116 ALYMDQGFDKTYEIFNKVVIPHL---NLVEHIKDYKTQLQEFIQLERKSL-SYKTVKVGG 171 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +H F + G GSS ++AEQ AA++AL K Sbjct: 172 PSHRPIFKSEVFLENSIMLGTGQGSSTKEAEQNAAKEALSK 212 >UniRef50_Q2NJY3 Ribonuclease 3 n=14 Tax=Candidatus Phytoplasma RepID=RNC_AYWBP Length = 237 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 13/224 (5%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 I L + L + L +QALTH S S++ NERLEFLGD+I+ ++A+ LY Sbjct: 3 NIQILFQTLNIFPKNLVLYKQALTHSSYSNEQTPPQEDNERLEFLGDAIVGLLMADYLYS 62 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 + + DEG M++ RA V +L A++ EL L LG GE K+ F + I+ADT EA Sbjct: 63 Q-SKEDEGIMTKKRAQAVCEKSLTIYAQKIELQNYLLLGKGE-KNKDFNAKGIMADTFEA 120 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L G ++LD T +K+ N L + D KT+LQE +Q + Y +VQ Sbjct: 121 LFGAIYLDLGYLTAKKVFHNIVLPHLAKTI---YIIDFKTQLQEIVQSEKKTI-QYKIVQ 176 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +G AH + F + + G GS+++ AEQ AA+QAL K Sbjct: 177 EQGPAHSKNFVAEVYLE-KNLLGTGEGSTKKSAEQKAAQQALSK 219 >UniRef50_D1H8U7 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H8U7_VITVI Length = 1340 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 33/247 (13%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHR 59 + ++ L+ L Y+F LL +ALTH S + +RLEFLGD++L Y++ LYH+ Sbjct: 1093 VNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHK 1152 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS------GGFRR----- 108 +P + G ++ +R+ V + A+ A + +L + + EL G F + Sbjct: 1153 YPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGNFDKLPVES 1212 Query: 109 ----------ESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDE-ISPGDKQKDPK 157 +L D +E+L G + +DSD ++++ + L+ I+P + P Sbjct: 1213 TFGWESESSFPKVLGDVIESLAGAILVDSDYN--KEVVFQSIRPLLEPLITPETVKLHPA 1270 Query: 158 TRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 L E Q H + +VV G+A TI + +G T S +R A + A++ Sbjct: 1271 RELGELCQKEHYDIKR-VVVSQNGKA---SVTIEVEANGAKHKHTST-SDKRTATKLASK 1325 Query: 218 QALKKLE 224 + LK L+ Sbjct: 1326 EVLKSLK 1332 Score = 72.9 bits (178), Expect = 7e-12, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 43/185 (23%) Query: 3 PIVINRLQRKL-GYTFNHQEL------------LQQALTHRSASSK-HNERLEFLGDSIL 48 P +++R++ L + L + +A+T + H E LE LGDS L Sbjct: 892 PSIMHRIESLLLAVNLKNIHLNYCKQNDIPTFKVLEAITTKHCQEGFHLESLETLGDSFL 951 Query: 49 SYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGP---------- 98 Y + L+ F EG +S + ++ +L +L + +L +R Sbjct: 952 KYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAG 1011 Query: 99 ---------GELKSGGFR---------RESILADTVEALIGGVFLDSDIQTVEKLILNWY 140 EL S + + +AD VEALIG FL + +T + + W Sbjct: 1012 DQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIGA-FLSTGGETAALIFMRWL 1070 Query: 141 QTRLD 145 +D Sbjct: 1071 GINVD 1075 >UniRef50_UPI0001982FEB PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001982FEB Length = 1380 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 33/247 (13%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHR 59 + ++ L+ L Y+F LL +ALTH S + +RLEFLGD++L Y++ LYH+ Sbjct: 1133 VNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHK 1192 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS------GGFRR----- 108 +P + G ++ +R+ V + A+ A + +L + + EL G F + Sbjct: 1193 YPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGNFDKLPVES 1252 Query: 109 ----------ESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDE-ISPGDKQKDPK 157 +L D +E+L G + +DSD ++++ + L+ I+P + P Sbjct: 1253 TFGWESESSFPKVLGDVIESLAGAILVDSDYN--KEVVFQSIRPLLEPLITPETVKLHPA 1310 Query: 158 TRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 L E Q H + +VV G+A TI + +G T S +R A + A++ Sbjct: 1311 RELGELCQKEHYDIKR-VVVSQNGKA---SVTIEVEANGAKHKHTST-SDKRTATKLASK 1365 Query: 218 QALKKLE 224 + LK L+ Sbjct: 1366 EVLKSLK 1372 Score = 72.9 bits (178), Expect = 7e-12, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 43/185 (23%) Query: 3 PIVINRLQRKL-GYTFNHQEL------------LQQALTHRSASSK-HNERLEFLGDSIL 48 P +++R++ L + L + +A+T + H E LE LGDS L Sbjct: 932 PSIMHRIESLLLAVNLKNIHLNYCKQNDIPTFKVLEAITTKHCQEGFHLESLETLGDSFL 991 Query: 49 SYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGP---------- 98 Y + L+ F EG +S + ++ +L +L + +L +R Sbjct: 992 KYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAG 1051 Query: 99 ---------GELKSGGFR---------RESILADTVEALIGGVFLDSDIQTVEKLILNWY 140 EL S + + +AD VEALIG FL + +T + + W Sbjct: 1052 DQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIGA-FLSTGGETAALIFMRWL 1110 Query: 141 QTRLD 145 +D Sbjct: 1111 GINVD 1115 >UniRef50_A9YW43 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=A9YW43_OSV5 Length = 241 Score = 192 bits (488), Expect = 9e-48, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 12/225 (5%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRF 60 +++ +G Q+A TH+SA + E LEF+GDS+L ++I L+ R+ Sbjct: 6 QDIEQLVGTKIRDLSFYQRAFTHKSALKEYEQFNVSFETLEFMGDSVLGFIITKFLFDRY 65 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 EG +++ R LVR TLA +A + L + + + ++G IL D EAL+ Sbjct: 66 EERQEGFLTKARTKLVRSETLAAIALKLGLNKLVLMDEKGTRNGWNNNPKILEDVFEALV 125 Query: 121 GGVFLDSDIQTVEKLILNWY-QTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 G +++D + ++ +L Y + +++ + K +L + Q +LPLP Y VV Sbjct: 126 GAIYMDLGLLHAKQFVLRIYNDPKYIDLNSIMVDDNFKDKLMRHCQVNNLPLPEYEVVS- 184 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + F + ++G G S+++AEQ AA+ ++ Sbjct: 185 ---HWEGNFYVDALING-RFCGRGQAKSKKQAEQLAAKAFFNYIK 225 >UniRef50_B8LN71 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LN71_PICSI Length = 685 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 38/255 (14%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH---NERLEFLGDSILSYVIANALY 57 + I I+ L+R LGY F+++ LL +A H S + + +RLEFLGD++L Y+I + LY Sbjct: 217 IKCIDIDELERLLGYNFSYKGLLLEAFAHPSFNEHNGGCYQRLEFLGDAVLDYIITSYLY 276 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGF----------- 106 +P + G ++ MR+ V + A +A L L L S Sbjct: 277 SVYPDMKPGYLTDMRSMTVNNESFACVAVRHGLYMYLIQKSDSLSSAVTKYVDFMKALFT 336 Query: 107 -----------RRESILADTVEALIGGVFLDSDIQT--VEKLILNWYQTRLDEISPGDKQ 153 + +L D VE+ G + +D+ V KL+LN Q + +P Sbjct: 337 ADRDSCDEPEPKCPKVLGDIVESFAGALVIDTGFDLDCVWKLMLNILQPIV---TPETLC 393 Query: 154 KDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVV--GTG--SSRR 209 P L E Q +L L + G + + +VSG GTG +S + Sbjct: 394 LQPVRELSEVCQHHNLTLDYVKASKGNGNG----YLVEAKVSGKKVSGSVGGTGTRTSIK 449 Query: 210 KAEQAAAEQALKKLE 224 A++ A++ AL KL+ Sbjct: 450 DAKKVASKDALLKLK 464 Score = 82.5 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 43/150 (28%) Query: 38 ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLR-- 95 ERLE LGD+ L Y ++ L+ + ++DEG +++ R+ ++ + L + A+ +R Sbjct: 49 ERLEVLGDAFLKYAVSRRLFLVYDKLDEGQLTKKRSNAIKNSNLYKRAKGKGFPAYIRDE 108 Query: 96 -LGPGELKSGGFRRESI---------------------------------------LADT 115 P + + G +++ +AD Sbjct: 109 YFDPKQYFALGRPCKNVCTPELVHMIHYFEGDNTMTDTDFTSVKCTKRHHWLHMKTIADV 168 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLD 145 VEALIG +DS + W +D Sbjct: 169 VEALIGAYLVDSGFGAALAFL-KWIGIEID 197 Score = 41.3 bits (96), Expect = 0.025, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 157 KTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEP-VVGTG---SSRRKAE 212 K+ L E+ Q + +P+++ Q G H + FT + + G ++R A Sbjct: 609 KSSLNEFCQKKSWEVPSWVCYQEEGMPHQKSFTYMAVLRLPGNISIECLGEPMKNKRLAM 668 Query: 213 QAAAEQAL 220 ++A+ AL Sbjct: 669 ESASRGAL 676 >UniRef50_Q53844 Ribonuclease 3 n=3 Tax=Mollicutes RepID=RNC_SPICI Length = 248 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 8/227 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYH 58 I + ++ ++ +ALTH S +++HN +R+EFLGD+IL+ I+ L+ Sbjct: 13 IELKAFFKQYHVFIKERQYYLEALTHNSYANEHNLSYTYQRMEFLGDAILAKEISLYLFL 72 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 FP +EG+++ +R+ +VR TLAEL R L LG GE+K+ G+ + ILAD E+ Sbjct: 73 SFPDKNEGEITNLRSKIVREGTLAELVRRMNWAPFLLLGKGEIKTKGYEKNRILADIYES 132 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +I ++LD V I N + DK +D KT LQE+LQ Y +++ Sbjct: 133 MIAALYLDLGEDVVRTFINNTLIRMVSNPGFFDKIRDYKTELQEFLQAGDARTLEYKLIK 192 Query: 179 VRGE--AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + +T+ ++ G+ G G + ++AEQ AA AL+KL Sbjct: 193 ESQPLEGNRVLYTVVAEIGGIRY-GEGCGYTHKEAEQLAARDALQKL 238 >UniRef50_C2MCM1 Ribonuclease III n=3 Tax=Porphyromonas uenonis 60-3 RepID=C2MCM1_9PORP Length = 243 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 16/230 (6%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSAS-------SKHNERLEFLGDSILSYVIANAL 56 + L ++G +L A+ HRS + +NERLEFLGD++L I L Sbjct: 10 PDLTSLFDRIGIVPVRTDLYLLAMRHRSCTIIGEGGEKLNNERLEFLGDAVLEASICTYL 69 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 YH P DEGD+S+ +++LV E+ R L + + P L + I +TV Sbjct: 70 YHLHPTWDEGDLSKCKSSLVSRPVNNEVGRRLHLERYIIMVPSALDNSV----DIYGNTV 125 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGD--KQKDPKTRLQEYLQGRHLPLPTY 174 EALIG ++LD + + ++ ++ ++ K+ L E++Q HL + Sbjct: 126 EALIGAIYLDQGYARTQDFVRDYILPTYRDMREHTVASIQNYKSELIEWVQKHHLSH-EF 184 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + + + HD F + G G GSS+++A+Q AA L+ L+ Sbjct: 185 RLEEHQTMPHD-HFIYSVWIDGKP-VGRGAGSSKKRAQQEAARDTLELLK 232 >UniRef50_B2RFM9 Drosha protein n=1 Tax=Oikopleura dioica RepID=B2RFM9_OIKDI Length = 1096 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 17/228 (7%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSA-----SSKHNERLEFLGDSILSYVIANALYHRFP 61 L+ LG F + LL +ALT ++ + HN+RLEFLGD+I +++ A L+ FP Sbjct: 770 AELEELLGVKFKNIRLLAKALTLKNVKYNDITKGHNQRLEFLGDAICNFLAAEYLFKHFP 829 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECL--RLGPGELKSGGFRRESILADTVEAL 119 EG ++ +R T+V T A +A++ L + + R K G ++ ILAD +E+ Sbjct: 830 LHHEGHLTLLRCTMVGAPTQALVAQQIGLDKFVISRQSLSHDKMGW--KQKILADLMESF 887 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTY 174 IG +F+D I V+ + + RL DPK+ LQ+ + LP Y Sbjct: 888 IGALFIDRGIIAVDVFMKVAFYPRLKHFIMSQVWNDPKSCLQQCCLTLRPEEGTPDLPEY 947 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 + + + G G G S + AE+ AA +AL+K Sbjct: 948 RTTTSN--SSKMRYRVEVFFRG-ERIGEGHGPSIQLAEKFAARKALEK 992 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 90/233 (38%), Gaps = 61/233 (26%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH----------------------------- 36 + LQ LGY F + + +A+TH SA + Sbjct: 538 LESLQTILGYQFKNLSWITRAMTHPSAVYNYGENPDHVRNSTTNCGIRKPIYGEEGPSRP 597 Query: 37 NER--------------------------LE---FLGDSILSYVIANALYHRFPRVDEGD 67 ER LE FLGD++L +V++ +++H FP + EG Sbjct: 598 YERKRGIVTLIKVMALLGTSEPKESPINYLERPEFLGDAVLGFVVSVSIFHLFPNLGEGA 657 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS 127 +S +R LV LA LA++ L + + + + LA+ EA++G +++D Sbjct: 658 LSMLRCALVCNVHLAALAQKLTLEDYFVYIHSQDLAKREDLNNALANCFEAVLGAIYMDG 717 Query: 128 DIQTVEKLILN-WYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 ++ V +L+ + + + D P QEY G + + V++ Sbjct: 718 GLEPVRQLLARVLFDDKALQRVWLDFPAHPLQ--QEYPDGDRAQIESSKVLKR 768 >UniRef50_Q98514 Putative protein A464R n=6 Tax=Chlorovirus RepID=A464_PBCV1 Length = 275 Score = 189 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 11/222 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASS-----KHNERLEFLGDSILSYVIANALYHRFP 61 ++ +G + A S ++ ER+EF+GDS+L ++IA LY FP Sbjct: 52 EDVEYLIGMPIIDFSYYKTAF---SYNAIVEGEATYERMEFVGDSVLGFIIARYLYDNFP 108 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 DEG +SR+R V G L+ +A L + + L G IL D EAL+G Sbjct: 109 GKDEGFLSRLRTKFVSGKFLSSIALRMGLHNYVIMHQKGLYRGWNTNPRILEDVFEALMG 168 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++ D I ++ + D + + K RL ++ + LP P ++ V +G Sbjct: 169 AIYFDLGINAAKQFFMTTLAKYAD-MQSLMLDTNYKDRLLKHTRKVELPRPEFVSVFEKG 227 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 A + F + ++G + GTG SR+ AEQ A++ AL + Sbjct: 228 GA-NPSFIVDVVING-QKISTGTGKSRKDAEQNASKIALHTM 267 >UniRef50_C5WU72 Putative uncharacterized protein Sb01g015670 n=2 Tax=Sorghum bicolor RepID=C5WU72_SORBI Length = 1385 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 32/250 (12%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSA----SSKHNERLEFLGDSILSYVIANALY 57 N I + L+ L Y F+ LL +ALTH S ++ +RLEFLGD++L ++ + Y Sbjct: 1128 NFINLRSLELMLDYNFSDPSLLLEALTHGSYQIAGTTACYQRLEFLGDAVLDHIFTDYFY 1187 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRL--------------------- 96 H++P ++ +R+ V + A A + L + + Sbjct: 1188 HQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHILHSSSALHKKMADYLDKFEQSFS 1247 Query: 97 GPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDE-ISPGDKQKD 155 GP G +L D +E++ G +++D+ + +K++ + L+ +P + D Sbjct: 1248 GPSHGWEAGICLPKVLGDVIESIAGAIYIDT--KNDKKVVWRKMKRLLEPLATPDTLEID 1305 Query: 156 PKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAA 215 P L E+ + Y V + + Q G + TG ++R A++ A Sbjct: 1306 PVKELHEFCDPK-TCSIKYTVARE---DRVTSVAVEVQTKGTTYKATRTGLTKRDAKKLA 1361 Query: 216 AEQALKKLEL 225 A+ LK ++ Sbjct: 1362 AKSVLKDMKA 1371 >UniRef50_B9HHX6 Dicer-like protein n=3 Tax=Malpighiales RepID=B9HHX6_POPTR Length = 1468 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 31/247 (12%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHR 59 + + L+ L Y+FN LL +ALTH S + +RLEFLGD++L Y+I +Y Sbjct: 1214 VNVRYLESLLNYSFNDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITLHMYKE 1273 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK----------------- 102 +P + G ++ +R+ V + A A + L + +L Sbjct: 1274 YPGMSPGLLTDLRSASVNNDCYALSAVKVGLDRHILHASHDLHKHIVATVKKIQEFSLES 1333 Query: 103 SGGFRR----ESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDE-ISPGDKQKDPK 157 + G+ +L D +E+L G + +DS ++++ + L+ I+P + P Sbjct: 1334 TFGWESETAFPKVLGDVIESLAGAILVDSGYN--KEVVFESIRPLLEPLITPETLRLQPV 1391 Query: 158 TRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 L E Q +H Y V + TI + +GL T + + A++ A++ Sbjct: 1392 RELNELCQRQHFD---YKKPIVSRNGRNASVTIEVEANGLIFKHTATVADKTTAKKLASK 1448 Query: 218 QALKKLE 224 + LK L+ Sbjct: 1449 EVLKALK 1455 Score = 72.5 bits (177), Expect = 9e-12, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 77/237 (32%), Gaps = 51/237 (21%) Query: 3 PIVINRLQRKL----------GYTFNHQEL----LQQALTHRSASSKHN-ERLEFLGDSI 47 P +++RL+ L + H + + +A+T N E LE LGDS Sbjct: 1012 PSIMHRLESLLIAVNLKKMHSDHYLQHVNIPSMKVLEAITTNKCQENFNLESLETLGDSF 1071 Query: 48 LSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLG---------- 97 L Y + L+ + EG +S + ++ L +L +R Sbjct: 1072 LKYAASQQLFKIYQNHHEGLLSFKKDKIISNAALCRRGCNHKLQGFIRNESFDPKLWIIP 1131 Query: 98 ---------PGELKSGGFR---------RESILADTVEALIGGVFLDSDIQTVEKLILNW 139 E S G + + +AD VEALIG +L + + L ++W Sbjct: 1132 GGKLGSDFLSEEPLSKGRKIYIRGRRKVKSKTIADVVEALIGA-YLSTGGEVTALLFMDW 1190 Query: 140 YQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSG 196 ++D + LQ YL + +D + G Sbjct: 1191 IGIKVD-------FMNTPYERHIQLQAEKFVNVRYLESLLNYSFNDPSLLVEALTHG 1240 >UniRef50_B7P5Y8 Dicer-1, putative n=1 Tax=Ixodes scapularis RepID=B7P5Y8_IXOSC Length = 2050 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 105/255 (41%), Gaps = 46/255 (18%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFPR 62 + + ++GY F + L QA TH S + +RLEFLGD++L Y+I LY R Sbjct: 1795 DAFEARIGYRFRDRAYLLQAFTHASYHYNRLTDCYQRLEFLGDAVLDYLITRHLYDDPQR 1854 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECL------------RLGPGELKSGGFR--- 107 G ++ +R+ LV A LA +++ R + S GFR Sbjct: 1855 HSPGTLTDLRSALVNNTFFASLAVKYDFHRYFKNVSPGLFAVIQRFVETKCHSDGFRYHE 1914 Query: 108 ----------------RESILADTVEALIGGVFLDSD--IQTVEKLILNWYQTRLDEISP 149 L D E++ G +FLDS+ + TV ++ + ++ Sbjct: 1915 KYYLEEEECEEAEEVEVPKALGDIFESVAGAIFLDSNMSLDTVWRVYYAMMKPEIE---- 1970 Query: 150 GDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 PK+ ++E L+ P + + + I +V G V G G ++R Sbjct: 1971 YFSTHVPKSPIRELLELE----PQTAKFERAEMTLNGKVRIRVEVFGKGRFV-GVGRNKR 2025 Query: 210 KAEQAAAEQALKKLE 224 A+ AA++AL+ L+ Sbjct: 2026 IAKCTAAKRALRALK 2040 Score = 81.7 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Query: 20 QELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 +L QALT +A+ N ERLE +GDS L Y + LY P V EG +S +R+ + Sbjct: 1550 PSILLQALTMSNANDGINLERLETVGDSFLKYAVTAHLYCTHPSVHEGKLSHLRSRQISN 1609 Query: 79 NTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE-ALI 120 L L R LG + E ++ +E ALI Sbjct: 1610 LNLYRLGRARRLGGLMVATKFEPSDNWLPPGYVVPPGLERALI 1652 >UniRef50_Q9M9P8 T17B22.1 protein n=17 Tax=Eukaryota RepID=Q9M9P8_ARATH Length = 2042 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 36/247 (14%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHR 59 + + ++ L Y+F + LL +ALTH S + +RLEFLGDS+L Y+I LY + Sbjct: 1801 VNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDK 1860 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK----------------- 102 +P + G ++ MR+ V A +A + L + + L Sbjct: 1861 YPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQS 1920 Query: 103 SGGFRR----ESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLD-EISPGDKQKDPK 157 + G+ +L D +E+L G +F+DS ++++ + L I+P + P Sbjct: 1921 TFGWESDISFPKVLGDVIESLAGAIFVDSGYN--KEVVFASIKPLLGCMITPETVKLHPV 1978 Query: 158 TRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 L E Q L FT+ + +S S ++ A++ A + Sbjct: 1979 RELTELCQKWQFELSKAKDFD--------SFTVEVKAKEMSFAHTAKASDKKMAKKLAYK 2030 Query: 218 QALKKLE 224 + L L+ Sbjct: 2031 EVLNLLK 2037 Score = 63.6 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 32/152 (21%) Query: 24 QQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLA 82 +A+T + + H E LE LGDS L Y + L+ EG +S + ++ L Sbjct: 1634 LEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLC 1693 Query: 83 ELAREFELGECLRLGPGELK-----------------------------SGGFRRESILA 113 + + +L +R E K +R+S+ A Sbjct: 1694 QFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRNLKRKSV-A 1752 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLD 145 D VE+LIG +L + + +NW ++D Sbjct: 1753 DVVESLIGA-YLSEGGELAALMFMNWVGIKVD 1783 >UniRef50_UPI0001C16B2C Ribonuclease III n=2 Tax=Nostocaceae RepID=UPI0001C16B2C Length = 276 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 10/200 (5%) Query: 17 FNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 F ++LL+QALTHRS +++ HNERLEFLGD+IL+++ LY R+P+ E +++R Sbjct: 56 FEDEKLLRQALTHRSYANENPSEGDHNERLEFLGDAILNFISGEYLYSRYPQKGEDELTR 115 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD--SD 128 R+ LV LA+ A E L +RLG G ++ GG++ ++L+ T EA+IG +LD + Sbjct: 116 RRSALVEEKQLAKFALEVGLNVKMRLGKGTIQDGGYQNPNLLSSTFEAIIGAYYLDNNCN 175 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRH-LPLPTYLVVQVRGEAHDQE 187 I+ V+ + + D K R QE++Q + P Y Q+ G H E Sbjct: 176 IEAVKLAVEPLFDFVSQHTIESRYNVDSKNRFQEWVQKKLCANPPKYKTQQIGGSPHLPE 235 Query: 188 FTIHCQVSGLSEPVVGTGSS 207 F V G E G G + Sbjct: 236 FFSRVLVDG-KEFGQGNGKN 254 >UniRef50_C6VXT7 Ribonuclease III n=3 Tax=Flexibacteraceae RepID=C6VXT7_DYAFD Length = 248 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 12/228 (5%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANALYH 58 + +G ++ + Q A H SAS + NERLE+LGD++L V+A L+ Sbjct: 25 ESIAHVIGDKPSNLGVYQLAFRHTSASRETAIKGFRESNERLEYLGDAVLGMVVAEFLFT 84 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++P DEG ++ +R+ +V +L +++R+ L + + G R S+ D +EA Sbjct: 85 KYPYKDEGFLTEIRSRIVNRESLNQISRKLGLDRLIEYDGN--RRGMSPRSSMYGDALEA 142 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +G ++LD + I++ T D S + K+ + E+ Q + + +++ Sbjct: 143 FVGAIYLDKGFRFTRTFIISKLITHYDLDSIIQNNVNFKSLIIEWAQREGKEI-RFEILE 201 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 RG H +EF V+ +G G +++KAEQ+A+EQA LEL+ Sbjct: 202 ERGTRHHREFISQILVNDEP-FAIGNGFTKKKAEQSASEQACAILELK 248 >UniRef50_A9NW09 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NW09_PICSI Length = 330 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 35/254 (13%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANAL 56 ++ + + L+ L Y+F L+ +++TH S S +RLEFLGD++L Y+I Sbjct: 77 VSNVNVRYLESLLKYSFRVHTLVVESVTHASYKEPSFSGCYQRLEFLGDAVLDYLITLYF 136 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFR--------- 107 Y +P + G ++ +R+ V + A+ A + L + LR EL + Sbjct: 137 YKTYPGLSPGLLTDLRSAAVNNDCYAQAAVKCNLHQQLRHASSELHNQITEFAKLISSSS 196 Query: 108 ---------------RESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDE-ISPGD 151 +L D +E++ G V +DS+ T +L+ N + L+ ++P Sbjct: 197 ASGDHFFGWTTTEVAVPKVLGDLIESIAGAVLVDSEFDT--QLVWNAMKPLLEPLVTPKT 254 Query: 152 KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKA 211 + P LQE Q + Q G + + +V G S S++R A Sbjct: 255 IKYQPVRELQELCQKEFYTC-CFDDSQEEGTS---TVKVEVRVKGDSYIETCEASNKRTA 310 Query: 212 EQAAAEQALKKLEL 225 ++ AAE+ LK L+ Sbjct: 311 KKLAAEKVLKSLKA 324 >UniRef50_Q03VW5 Ribonuclease 3 n=9 Tax=Lactobacillales RepID=RNC_LEUMM Length = 236 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 10/212 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHR 59 + + +K +FN + LL +ALT R+ ++H +RLEFLGDS++ ++A L+ R Sbjct: 8 SYILKKFNISFNDESLLTEALTQRNYLNEHPDEKGRDYQRLEFLGDSVMQMIVAEYLFKR 67 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P EG ++ MR +V+ + A +R L E +RLG GE SG R+S+L D EA Sbjct: 68 YPDWHEGQLTEMRIAMVQTRSFAHFSRMVHLNEGIRLGKGEEMSGARDRDSLLEDIWEAF 127 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG ++LD V + + +D D+ D K+RLQE LQ + Y + Sbjct: 128 IGALYLDQGADVVRQFLNQTLFAAID-TDFFDRFIDFKSRLQERLQTKGSVDIDYQTEKE 186 Query: 180 RG-EAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 + Q F + E GTG S + Sbjct: 187 EQLSDNTQLFEASVSAND-KELARGTGKSIKD 217 >UniRef50_Q9UPY3 Endoribonuclease Dicer n=42 Tax=Euteleostomi RepID=DICER_HUMAN Length = 1922 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 47/258 (18%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61 ++K+ Y F ++ L QA TH S + +RLEFLGD+IL Y+I LY Sbjct: 1666 FENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1725 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS---------------GGF 106 + G ++ +R+ LV A LA +++ + + EL G Sbjct: 1726 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGM 1785 Query: 107 RR-----------------ESILADTVEALIGGVFLDSD--IQTVEKLILNWYQTRLDEI 147 + D E+L G +++DS ++TV ++ + +++ Sbjct: 1786 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKF 1845 Query: 148 SPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 S P++ ++E L+ P +D + + +V G + G G S Sbjct: 1846 SAN----VPRSPVRELLEME----PETAKFSPAERTYDGKVRVTVEVVGKGK-FKGVGRS 1896 Query: 208 RRKAEQAAAEQALKKLEL 225 R A+ AAA +AL+ L+ Sbjct: 1897 YRIAKSAAARRALRSLKA 1914 Score = 83.7 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 5/87 (5%) Query: 13 LGYTFN----HQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGD 67 +GY+ + L+ QALT +AS N ERLE LGDS L + I L+ +P EG Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGR 1342 Query: 68 MSRMRATLVRGNTLAELAREFELGECL 94 +S MR+ V L L ++ L + Sbjct: 1343 LSYMRSKKVSNCNLYRLGKKKGLPSRM 1369 >UniRef50_Q83I82 Ribonuclease 3 n=2 Tax=Tropheryma whipplei RepID=RNC_TROW8 Length = 223 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 13/198 (6%) Query: 20 QELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 LL+ A H+S S ++ NERLEFLGD++L V+++ L+ P EG +S R+ Sbjct: 18 PGLLRTAFVHKSFSFENGACQNNERLEFLGDAVLGLVVSHYLFETCPEYTEGQLSAARSY 77 Query: 75 LVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEK 134 +V G ++A++A+E LG+ + LG GE +GG + S+LAD +E+LIG V +D ++ Sbjct: 78 IVSGTSIAQIAKELNLGQFMLLGKGEKLAGGMDKTSLLADLLESLIGAVMVDQGFESARD 137 Query: 135 LILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQV 194 +L +L ++ DPKT+LQ+ + + Y VV G H + F V Sbjct: 138 FVLALVGEKLRQVGEFSVD-DPKTKLQKLTRTQL----VYEVV-TEGPPHSRTFKASVIV 191 Query: 195 SGLSEPVVGTGSSRRKAE 212 + + G GSS+++A+ Sbjct: 192 N--EKRFFGQGSSKKQAQ 207 >UniRef50_Q69KJ0 Ribonuclease 3-like protein 3 n=2 Tax=Oryza sativa RepID=RTL3_ORYSJ Length = 299 Score = 185 bits (471), Expect = 9e-46, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 31/247 (12%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANA 55 M P + ++ LGY F + L+++ALTH S + ERLE+LGD++L+ V++ Sbjct: 34 MGPGEVAAVESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSRE 93 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGEL-------------- 101 ++ + ++ G ++R+RA V LA +A L LR L Sbjct: 94 VFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIEELSMY 153 Query: 102 ---KSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDE-ISPGDKQKDPK 157 +G +L D VE+LIG ++ DS+ ++++ +Q D IS K P Sbjct: 154 PIHSNGLLDPPKVLCDVVESLIGAIYCDSNFN--QEIVWQVFQKLADPLISLETLGKHPV 211 Query: 158 TRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 + L E+ Q V++ + D+ T+ + G + A+ AA+ Sbjct: 212 SELFEFCQKTRRG------VKIVKDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAK 265 Query: 218 QALKKLE 224 AL KL+ Sbjct: 266 AALDKLK 272 >UniRef50_A7LFZ6 Endoribonuclease Dicer homolog 4 n=7 Tax=Poaceae RepID=DCL4_ORYSJ Length = 1657 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 34/250 (13%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSAS---SKHNERLEFLGDSILSYVIANALY 57 M+ I L+ +GY F H+ LL QA H S S +RLEFLGD++L YVI + LY Sbjct: 1209 MDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLY 1268 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFR---------- 107 +P + G ++ +R+ V ++LA A E + + L L S + Sbjct: 1269 STYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNS 1328 Query: 108 ---------RESILADTVEALIGGVFLDSDI--QTVEKLILNWYQTRLDEISPGDKQKDP 156 L D VE+ IG V LDS V K++L + L + + +P Sbjct: 1329 EKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVL---TFANMHTNP 1385 Query: 157 KTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR--RKAEQA 214 L+E Q L + D E+ + +V+ S+ ++ T ++R + A + Sbjct: 1386 MRELRELCQCHGFELGL-----PKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKF 1440 Query: 215 AAEQALKKLE 224 AA++ L KL+ Sbjct: 1441 AAQETLSKLK 1450 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 42/168 (25%) Query: 23 LQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTL 81 + +ALT + ER E LGD+ L YV+ + + +DEG ++R R+ +V + L Sbjct: 1027 ILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHL 1086 Query: 82 AELAREFELGECLR---LGPGELKSGGFRRE----------------------------- 109 EL+ +L +R P + + G + Sbjct: 1087 YELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLHQMDIHPDNRENCNLRCT 1146 Query: 110 --------SILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISP 149 ++AD VE+LIG ++ + + +W +D +P Sbjct: 1147 RSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFL-HWIGIDVDFNNP 1193 Score = 47.8 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 6/78 (7%) Query: 153 QKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVV-----GTGSS 207 K ++ L E + P + + + G +H ++FT V G Sbjct: 1567 HKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKL 1626 Query: 208 -RRKAEQAAAEQALKKLE 224 ++ A++ AA+ AL L+ Sbjct: 1627 QKKAAQEHAAQGALWCLK 1644 >UniRef50_A6KZ76 Ribonuclease 3 n=30 Tax=Bacteroidales RepID=RNC_BACV8 Length = 308 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 13/227 (5%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRF 60 R + LG+ + +QAL H+S S K +NERLEFLGD+IL V+A+ +Y RF Sbjct: 22 RFYKMLGFYPKDISIYEQALLHKSLSVKSEKGRLLNNERLEFLGDAILDAVVADIVYKRF 81 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 EG ++ R+ +V+ TL LA E L + ++ + + + + EAL+ Sbjct: 82 EGKREGFLTNTRSKIVQRETLNRLAIEIGLDKLIKYTARQSSHNSY----MCGNAFEALV 137 Query: 121 GGVFLDSDIQTVEKLIL-NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 G ++LD + + + ++ K+ + K++L E+ Q + L+ Q Sbjct: 138 GAIYLDRGYRACKYFMEHRIIGPYINLEKISRKEVNFKSKLIEWSQKNRFEVTFELITQS 197 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + ++ F V G+S GTG S+++++Q AA AL K++ + Sbjct: 198 HDQGYNPTFESEVLVEGIS-GGKGTGYSKKESQQMAARVALGKIKND 243 >UniRef50_D1Y4H6 Ribonuclease III n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4H6_9BACT Length = 231 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 108/210 (51%), Gaps = 15/210 (7%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHR 59 + QR++GY F+ LL++ALTH S + + NERLEFLGD++L +I+ L+ Sbjct: 11 DLLEFQRRIGYEFSDPALLEEALTHSSYAHERGVPFWNERLEFLGDAVLEVLISEELFRA 70 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 P EG M+R RA+LVR L+ L L LG G+ S E+++ D VEAL Sbjct: 71 RPDASEGQMTRERASLVREEVLSAWGHSLGLDGLLLLGMGQRGSA---SENMIGDAVEAL 127 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG ++LD ++ + +Q DPK+RLQ Q R+ P P Y +++ Sbjct: 128 IGALYLDGGLEQARAFLNR------RPRGAAREQLDPKSRLQILCQERNGPAPYYELLER 181 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 +G HD F + G E G G+SR+ Sbjct: 182 KGPEHDPIFIARALLDG-RELARGRGTSRK 210 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A4J683 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_D... 273 4e-72 UniRef50_Q47WP5 Ribonuclease 3 n=310 Tax=Proteobacteria RepID=RN... 267 2e-70 UniRef50_UPI0000E0E146 ribonuclease III n=1 Tax=Glaciecola sp. H... 267 2e-70 UniRef50_A3EU88 Ribonuclease III n=2 Tax=Leptospirillum sp. Grou... 263 4e-69 UniRef50_Q1YS28 Ribonuclease III n=1 Tax=gamma proteobacterium H... 262 6e-69 UniRef50_C8W586 Ribonuclease III n=2 Tax=Clostridia RepID=C8W586... 260 3e-68 UniRef50_Q3AC58 Ribonuclease 3 n=1 Tax=Carboxydothermus hydrogen... 260 3e-68 UniRef50_C6HXB9 Ribonuclease III n=1 Tax=Leptospirillum ferrodia... 259 4e-68 UniRef50_Q2Y871 Ribonuclease III n=2 Tax=Proteobacteria RepID=Q2... 258 7e-68 UniRef50_B0USS1 Ribonuclease 3 n=5 Tax=Gammaproteobacteria RepID... 258 1e-67 UniRef50_B2I604 Ribonuclease 3 n=12 Tax=Bacteria RepID=RNC_XYLF2 257 2e-67 UniRef50_Q3KHL9 Ribonuclease 3 n=16 Tax=Gammaproteobacteria RepI... 255 1e-66 UniRef50_Q47S78 Ribonuclease 3 n=73 Tax=Actinobacteria (class) R... 255 1e-66 UniRef50_Q67PF5 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_S... 254 2e-66 UniRef50_A0L633 Ribonuclease 3 n=1 Tax=Magnetococcus sp. MC-1 Re... 253 3e-66 UniRef50_A5D1H6 Ribonuclease 3 n=3 Tax=Peptococcaceae RepID=RNC_... 253 4e-66 UniRef50_D1AY72 Ribonuclease III n=1 Tax=Streptobacillus monilif... 253 5e-66 UniRef50_D0L0J9 Ribonuclease III n=2 Tax=Gammaproteobacteria Rep... 252 5e-66 UniRef50_Q8R9W3 Ribonuclease 3 n=37 Tax=Bacteria RepID=RNC_THETN 252 5e-66 UniRef50_C0GHL1 Ribonuclease III n=1 Tax=Dethiobacter alkaliphil... 252 9e-66 UniRef50_UPI0000E87AF2 ribonuclease III n=1 Tax=Methylophilales ... 251 1e-65 UniRef50_B8CWW9 Ribonuclease III n=1 Tax=Halothermothrix orenii ... 250 2e-65 UniRef50_Q0SMF0 Ribonuclease 3 n=21 Tax=Borrelia RepID=RNC_BORAP 250 3e-65 UniRef50_Q7VRR0 Ribonuclease 3 n=8 Tax=Gammaproteobacteria RepID... 248 9e-65 UniRef50_Q3A4Q8 Ribonuclease 3 n=1 Tax=Pelobacter carbinolicus D... 248 1e-64 UniRef50_B2A2N1 Ribonuclease 3 n=1 Tax=Natranaerobius thermophil... 248 1e-64 UniRef50_C1D7L4 Rnc n=2 Tax=Proteobacteria RepID=C1D7L4_LARHH 248 1e-64 UniRef50_B1LTR3 Ribonuclease III n=11 Tax=Alphaproteobacteria Re... 247 2e-64 UniRef50_C6V631 Ribonuclease III n=2 Tax=Neorickettsia RepID=C6V... 247 3e-64 UniRef50_C9RJ88 Ribonuclease III n=1 Tax=Fibrobacter succinogene... 246 4e-64 UniRef50_D2QZC7 Ribonuclease III n=1 Tax=Pirellula staleyi DSM 6... 245 6e-64 UniRef50_A0NMB9 Ribonuclease III n=2 Tax=Rhodobacteraceae RepID=... 245 7e-64 UniRef50_Q6MLR5 Ribonuclease 3 n=1 Tax=Bdellovibrio bacteriovoru... 245 7e-64 UniRef50_C9KQ86 Ribonuclease III n=4 Tax=Clostridiales RepID=C9K... 245 9e-64 UniRef50_A9KFA0 Ribonuclease 3 n=6 Tax=Coxiella burnetii RepID=R... 245 9e-64 UniRef50_B3DV16 Ribonuclease III n=2 Tax=Verrucomicrobia RepID=B... 245 1e-63 UniRef50_C0QLB1 Two domain fusion protein n=1 Tax=Desulfobacteri... 244 1e-63 UniRef50_Q0AF70 Ribonuclease 3 n=4 Tax=Proteobacteria RepID=RNC_... 244 2e-63 UniRef50_B0S1M6 Ribonuclease III n=2 Tax=Finegoldia magna RepID=... 243 2e-63 UniRef50_Q5LZ68 Ribonuclease 3 n=100 Tax=cellular organisms RepI... 243 3e-63 UniRef50_B8FKR2 Ribonuclease III n=1 Tax=Desulfatibacillum alken... 243 4e-63 UniRef50_Q053L4 Ribonuclease 3 n=4 Tax=Leptospira RepID=RNC_LEPBL 242 5e-63 UniRef50_A5EV51 Ribonuclease III n=2 Tax=Cardiobacteriaceae RepI... 242 5e-63 UniRef50_Q2LVR4 Ribonuclease III n=1 Tax=Syntrophus aciditrophic... 242 6e-63 UniRef50_D0GJ73 Ribonuclease III n=2 Tax=Leptotrichia RepID=D0GJ... 242 6e-63 UniRef50_Q72C44 Ribonuclease 3 n=9 Tax=Desulfovibrionaceae RepID... 242 6e-63 UniRef50_B0VFA5 DsRNA-specific ribonuclease n=1 Tax=Candidatus C... 242 6e-63 UniRef50_B9M911 Ribonuclease III n=1 Tax=Geobacter sp. FRC-32 Re... 242 9e-63 UniRef50_B0PD50 Putative uncharacterized protein n=1 Tax=Anaerot... 242 1e-62 UniRef50_Q1Q4S0 Similar to ribonuclease III n=1 Tax=Candidatus K... 242 1e-62 UniRef50_D2RKZ6 Ribonuclease III n=2 Tax=Acidaminococcus RepID=D... 241 1e-62 UniRef50_B3T0T1 Putative RNase3 domain protein n=2 Tax=prokaryot... 241 2e-62 UniRef50_B2KC89 Ribonuclease III n=1 Tax=Elusimicrobium minutum ... 241 2e-62 UniRef50_C9L8J0 Ribonuclease III n=4 Tax=Clostridiales RepID=C9L... 240 2e-62 UniRef50_A0LGM1 Ribonuclease 3 n=1 Tax=Syntrophobacter fumaroxid... 240 2e-62 UniRef50_A8ZZF3 Ribonuclease III n=1 Tax=Desulfococcus oleovoran... 240 3e-62 UniRef50_D1ATS9 Ribonuclease 3 n=1 Tax=Anaplasma centrale str. I... 239 4e-62 UniRef50_C7NB47 Ribonuclease III n=1 Tax=Leptotrichia buccalis C... 239 4e-62 UniRef50_D0MGH0 Ribonuclease III n=1 Tax=Rhodothermus marinus DS... 239 5e-62 UniRef50_A8SMU0 Putative uncharacterized protein n=1 Tax=Parvimo... 239 5e-62 UniRef50_A5VKP2 Ribonuclease 3 n=25 Tax=Lactobacillus RepID=RNC_... 238 8e-62 UniRef50_A6DSV3 Ribonuclease III n=1 Tax=Lentisphaera araneosa H... 238 1e-61 UniRef50_C8PI53 Ribonuclease III n=1 Tax=Campylobacter gracilis ... 238 1e-61 UniRef50_C2EW95 Ribonuclease III n=4 Tax=Lactobacillaceae RepID=... 238 1e-61 UniRef50_C9LMI7 Ribonuclease III n=1 Tax=Dialister invisus DSM 1... 238 1e-61 UniRef50_C4V2U1 Ribonuclease III n=1 Tax=Selenomonas flueggei AT... 237 2e-61 UniRef50_B0TGW4 Ribonuclease 3 n=1 Tax=Heliobacterium modestical... 237 2e-61 UniRef50_D1ALH0 Ribonuclease III n=7 Tax=Fusobacteriaceae RepID=... 237 2e-61 UniRef50_Q6ANV0 Ribonuclease 3 n=2 Tax=Desulfobulbaceae RepID=RN... 237 2e-61 UniRef50_C4FT63 Putative uncharacterized protein n=1 Tax=Catonel... 237 3e-61 UniRef50_Q3ZXY9 Ribonuclease 3 n=5 Tax=Dehalococcoides RepID=RNC... 237 3e-61 UniRef50_Q3SH50 Ribonuclease 3 n=11 Tax=Proteobacteria RepID=RNC... 236 4e-61 UniRef50_B9E1G8 Ribonuclease 3 n=35 Tax=Clostridium RepID=RNC_CLOK1 236 4e-61 UniRef50_C7LRK0 Ribonuclease III n=1 Tax=Desulfomicrobium bacula... 236 5e-61 UniRef50_A8SP75 Putative uncharacterized protein n=2 Tax=Clostri... 236 6e-61 UniRef50_Q39T82 Ribonuclease 3 n=5 Tax=Geobacter RepID=RNC_GEOMG 235 8e-61 UniRef50_C8X2M7 Ribonuclease III n=4 Tax=Desulfovibrionales RepI... 235 1e-60 UniRef50_Q9ZLH2 Ribonuclease 3 n=45 Tax=Epsilonproteobacteria Re... 235 1e-60 UniRef50_A6GP51 Ribonuclease III n=1 Tax=Limnobacter sp. MED105 ... 235 1e-60 UniRef50_A1AWQ6 Ribonuclease III n=3 Tax=Gammaproteobacteria Rep... 234 1e-60 UniRef50_UPI00016BFC87 Ribonuclease III n=1 Tax=Epulopiscium sp.... 234 2e-60 UniRef50_C6XJG5 Ribonuclease III n=1 Tax=Hirschia baltica ATCC 4... 234 2e-60 UniRef50_C3Y2N8 Putative uncharacterized protein n=1 Tax=Branchi... 234 2e-60 UniRef50_C3RKG6 Ribonuclease III n=5 Tax=Bacteria RepID=C3RKG6_9... 233 3e-60 UniRef50_B8E199 Ribonuclease III n=1 Tax=Dictyoglomus turgidum D... 233 3e-60 UniRef50_B4RCU4 Ribonuclease 3 n=6 Tax=Caulobacteraceae RepID=RN... 233 3e-60 UniRef50_C8W741 Ribonuclease III n=3 Tax=Atopobium RepID=C8W741_... 233 4e-60 UniRef50_B1ZYU8 Ribonuclease III n=2 Tax=Opitutaceae RepID=B1ZYU... 233 4e-60 UniRef50_B7JZ63 Ribonuclease III n=3 Tax=Cyanobacteria RepID=B7J... 232 5e-60 UniRef50_UPI000174552F putative Ribonuclease III n=1 Tax=Verruco... 232 6e-60 UniRef50_D0STQ6 Ribonuclease III n=1 Tax=Acinetobacter lwoffii S... 232 6e-60 UniRef50_C1Q9X5 Ribonuclease III n=1 Tax=Brachyspira murdochii D... 232 6e-60 UniRef50_Q8CPI1 Ribonuclease 3 n=63 Tax=Staphylococcaceae RepID=... 232 6e-60 UniRef50_Q5GTI3 Ribonuclease 3 n=17 Tax=Rickettsiales RepID=RNC_... 232 8e-60 UniRef50_D1B4H0 Ribonuclease III n=5 Tax=Campylobacterales RepID... 231 9e-60 UniRef50_B3R1Z9 Ribonuclease 3 n=139 Tax=Bacteria RepID=RNC_CUPTR 231 1e-59 UniRef50_B0K1V8 Ribonuclease III n=19 Tax=Clostridia RepID=B0K1V... 231 1e-59 UniRef50_B1C8X8 Putative uncharacterized protein n=1 Tax=Anaerof... 231 1e-59 UniRef50_D0LWB5 Ribonuclease III n=1 Tax=Haliangium ochraceum DS... 231 1e-59 UniRef50_Q027L3 Ribonuclease 3 n=1 Tax=Candidatus Solibacter usi... 231 2e-59 UniRef50_C8NEF3 Ribonuclease III n=2 Tax=Granulicatella RepID=C8... 230 2e-59 UniRef50_B9XI61 Ribonuclease III n=1 Tax=bacterium Ellin514 RepI... 230 2e-59 UniRef50_B1H0Q0 Ribonuclease III n=1 Tax=uncultured Termite grou... 230 3e-59 UniRef50_Q0AYW0 Ribonuclease 3 n=1 Tax=Syntrophomonas wolfei sub... 230 3e-59 UniRef50_D1VB32 Ribonuclease III n=1 Tax=Frankia sp. EuI1c RepID... 230 3e-59 UniRef50_Q1JXG8 Ribonuclease III n=1 Tax=Desulfuromonas acetoxid... 230 3e-59 UniRef50_Q7UGZ7 Ribonuclease 3 n=1 Tax=Rhodopirellula baltica Re... 230 4e-59 UniRef50_C5QRI2 Ribonuclease III n=2 Tax=Staphylococcus RepID=C5... 230 4e-59 UniRef50_C5CSF5 Ribonuclease 3 n=6 Tax=Burkholderiales RepID=RNC... 229 4e-59 UniRef50_C1ZAX4 RNAse III n=2 Tax=Planctomycetaceae RepID=C1ZAX4... 229 5e-59 UniRef50_Q2W513 DsRNA-specific ribonuclease n=2 Tax=Magnetospiri... 229 7e-59 UniRef50_Q0BTG2 Ribonuclease III n=12 Tax=Rhodospirillales RepID... 229 7e-59 UniRef50_A1APX0 Ribonuclease III n=1 Tax=Pelobacter propionicus ... 228 7e-59 UniRef50_Q6MEK1 Ribonuclease 3 n=2 Tax=Parachlamydiaceae RepID=R... 228 8e-59 UniRef50_A8TKF3 SsrA-binding protein n=1 Tax=alpha proteobacteri... 228 8e-59 UniRef50_D1CFY1 Ribonuclease III n=1 Tax=Thermobaculum terrenum ... 228 9e-59 UniRef50_B6WR93 Putative uncharacterized protein n=1 Tax=Desulfo... 228 9e-59 UniRef50_O69161 Ribonuclease 3 n=2 Tax=Alphaproteobacteria RepID... 228 1e-58 UniRef50_C5SLX4 Ribonuclease III n=1 Tax=Asticcacaulis excentric... 228 1e-58 UniRef50_D1N9T0 Ribonuclease III n=1 Tax=Victivallis vadensis AT... 228 1e-58 UniRef50_B2S448 Ribonuclease 3 n=2 Tax=Treponema pallidum RepID=... 228 1e-58 UniRef50_A6C1C3 Ribonuclease III n=1 Tax=Planctomyces maris DSM ... 228 1e-58 UniRef50_D1BLX9 Ribonuclease III n=3 Tax=Veillonella RepID=D1BLX... 227 2e-58 UniRef50_A5IN74 Ribonuclease 3 n=8 Tax=Thermotogaceae RepID=RNC_... 227 2e-58 UniRef50_Q2GIW0 Ribonuclease 3 n=17 Tax=Anaplasmataceae RepID=RN... 227 2e-58 UniRef50_Q0F3I4 Ribonuclease III n=1 Tax=Mariprofundus ferrooxyd... 227 2e-58 UniRef50_Q2S2W4 Ribonuclease III n=1 Tax=Salinibacter ruber DSM ... 226 3e-58 UniRef50_A4VIX5 Ribonuclease III n=2 Tax=Proteobacteria RepID=A4... 226 3e-58 UniRef50_C8PUU2 Ribonuclease III n=4 Tax=Gammaproteobacteria Rep... 226 6e-58 UniRef50_B5YDQ5 Ribonuclease III n=1 Tax=Dictyoglomus thermophil... 225 6e-58 UniRef50_B6IN01 Ribonuclease III n=1 Tax=Rhodospirillum centenum... 225 7e-58 UniRef50_Q8RGX3 Ribonuclease 3 n=10 Tax=Fusobacterium RepID=RNC_... 225 7e-58 UniRef50_B4U7T8 Ribonuclease 3 n=3 Tax=Aquificaceae RepID=RNC_HYDS0 225 8e-58 UniRef50_Q4FUV6 Ribonuclease 3 n=11 Tax=Gammaproteobacteria RepI... 225 8e-58 UniRef50_C3P5Q0 Ribonuclease 3 n=173 Tax=cellular organisms RepI... 225 8e-58 UniRef50_Q73NX5 Ribonuclease 3 n=2 Tax=Treponema RepID=RNC_TREDE 225 1e-57 UniRef50_C0QYN3 Ribonuclease III n=1 Tax=Brachyspira hyodysenter... 224 2e-57 UniRef50_C2KW20 Ribonuclease III n=1 Tax=Oribacterium sinus F026... 224 2e-57 UniRef50_A4XJW5 Ribonuclease III n=2 Tax=Clostridia RepID=A4XJW5... 223 3e-57 UniRef50_A7NAR0 Ribonuclease 3 n=18 Tax=Francisella RepID=RNC_FRATF 223 4e-57 UniRef50_C3PH92 Ribonuclease III n=12 Tax=Corynebacterium RepID=... 223 5e-57 UniRef50_A8GM79 Ribonuclease 3 n=6 Tax=Rickettsia RepID=RNC_RICAH 222 7e-57 UniRef50_Q2IIE0 Ribonuclease III n=5 Tax=Cystobacterineae RepID=... 222 9e-57 UniRef50_Q0APC4 Ribonuclease III n=2 Tax=Hyphomonadaceae RepID=Q... 221 9e-57 UniRef50_B2SAD9 Ribonuclease 3 n=62 Tax=Rhizobiales RepID=RNC_BRUA1 221 1e-56 UniRef50_Q1D5X9 Ribonuclease 3 n=1 Tax=Myxococcus xanthus DK 162... 221 1e-56 UniRef50_Q3B6L3 Ribonuclease 3 n=9 Tax=Chlorobiaceae RepID=RNC_P... 221 2e-56 UniRef50_Q1NXA7 Ribonuclease III n=2 Tax=delta proteobacterium M... 221 2e-56 UniRef50_Q9Z5U2 Ribonuclease 3 n=9 Tax=Sphingomonadales RepID=RN... 221 2e-56 UniRef50_A9WJ69 Ribonuclease 3 n=3 Tax=Chloroflexus RepID=RNC_CHLAA 220 3e-56 UniRef50_A0YTE9 Ribonuclease III n=1 Tax=Lyngbya sp. PCC 8106 Re... 220 3e-56 UniRef50_B3E2K4 Ribonuclease III n=1 Tax=Geobacter lovleyi SZ Re... 220 3e-56 UniRef50_A5CEW8 Ribonuclease III n=2 Tax=Orientia tsutsugamushi ... 220 4e-56 UniRef50_C1SM31 Ribonuclease III n=1 Tax=Denitrovibrio acetiphil... 220 4e-56 UniRef50_C1TMA2 Ribonuclease III n=1 Tax=Dethiosulfovibrio pepti... 220 4e-56 UniRef50_B0SDK6 Ribonuclease III n=2 Tax=Leptospira biflexa sero... 220 4e-56 UniRef50_A5V230 Ribonuclease 3 n=2 Tax=Roseiflexus RepID=RNC_ROSS1 219 5e-56 UniRef50_Q0C3T9 Ribonuclease III n=1 Tax=Hyphomonas neptunium AT... 219 5e-56 UniRef50_C7GYL4 Ribonuclease III n=1 Tax=Eubacterium saphenum AT... 219 6e-56 UniRef50_B5JG37 Ribonuclease III n=1 Tax=Verrucomicrobiae bacter... 217 2e-55 UniRef50_D0YUT0 Ribonuclease III n=3 Tax=Mobiluncus RepID=D0YUT0... 217 2e-55 UniRef50_Q4JUY7 Ribonuclease 3 n=9 Tax=Corynebacterium RepID=RNC... 216 4e-55 UniRef50_Q049R1 DsRNA-specific ribonuclease n=4 Tax=Lactobacillu... 216 5e-55 UniRef50_UPI00016C442D ribonuclease III n=1 Tax=Gemmata obscurig... 216 6e-55 UniRef50_A7BCY7 Putative uncharacterized protein n=1 Tax=Actinom... 215 7e-55 UniRef50_A4E6T0 Putative uncharacterized protein n=3 Tax=Collins... 215 7e-55 UniRef50_D0RNU3 Ribonuclease III n=1 Tax=alpha proteobacterium H... 215 8e-55 UniRef50_UPI0001553722 PREDICTED: similar to ribonuclease III, n... 215 1e-54 UniRef50_Q9NRR4 Ribonuclease 3 n=53 Tax=Eumetazoa RepID=RNC_HUMAN 215 1e-54 UniRef50_Q253V2 Ribonuclease 3 n=13 Tax=Chlamydiaceae RepID=RNC_... 215 1e-54 UniRef50_B4WL11 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7... 214 2e-54 UniRef50_D0WNC5 Ribonuclease III n=1 Tax=Actinomyces sp. oral ta... 214 2e-54 UniRef50_Q2SRZ8 Ribonuclease 3 n=4 Tax=Mollicutes RepID=RNC_MYCCT 214 2e-54 UniRef50_C0VZE3 Ribonuclease III n=1 Tax=Actinomyces coleocanis ... 214 2e-54 UniRef50_C7N559 Ribonuclease III n=1 Tax=Slackia heliotrinireduc... 213 4e-54 UniRef50_P74368 Ribonuclease 3 n=1 Tax=Synechocystis sp. PCC 680... 213 4e-54 UniRef50_A9B5J8 Ribonuclease III n=1 Tax=Herpetosiphon aurantiac... 213 4e-54 UniRef50_C8WGU4 Ribonuclease III n=2 Tax=Coriobacteriaceae RepID... 213 4e-54 UniRef50_A6LNE7 Ribonuclease III n=2 Tax=Thermosipho RepID=A6LNE... 212 6e-54 UniRef50_D2LJ11 Ribonuclease III n=1 Tax=Rhodomicrobium vannieli... 211 9e-54 UniRef50_Q6PF88 Rnasen protein (Fragment) n=15 Tax=Coelomata Rep... 211 1e-53 UniRef50_D1C6L4 Ribonuclease III n=1 Tax=Sphaerobacter thermophi... 211 2e-53 UniRef50_Q3SRB3 Ribonuclease 3 n=17 Tax=Rhizobiales RepID=RNC_NITWN 211 2e-53 UniRef50_B3QS76 Ribonuclease III n=1 Tax=Chloroherpeton thalassi... 211 2e-53 UniRef50_A3EQH6 Ribonuclease III n=3 Tax=Leptospirillum RepID=A3... 210 2e-53 UniRef50_D1B5N5 Ribonuclease III n=1 Tax=Thermanaerovibrio acida... 209 5e-53 UniRef50_A9WMX9 Ribonuclease III n=3 Tax=Micrococcaceae RepID=A9... 208 9e-53 UniRef50_D0WEA4 Ribonuclease III n=1 Tax=Slackia exigua ATCC 700... 208 9e-53 UniRef50_A9A9D4 Ribonuclease III n=4 Tax=Methanococcus maripalud... 208 1e-52 UniRef50_B9L2H4 Ribonuclease III n=1 Tax=Thermomicrobium roseum ... 208 1e-52 UniRef50_A5UJK3 Ribonuclease III (DsRNA-specific), Rnc n=2 Tax=M... 207 2e-52 UniRef50_A4GHU1 Ribonuclease III n=1 Tax=uncultured marine bacte... 206 3e-52 UniRef50_A4WVP5 Ribonuclease 3 n=44 Tax=Rhodobacterales RepID=RN... 206 4e-52 UniRef50_A1WMW1 Ribonuclease 3 n=1 Tax=Verminephrobacter eisenia... 206 4e-52 UniRef50_A9BIG2 Ribonuclease III n=1 Tax=Petrotoga mobilis SJ95 ... 206 6e-52 UniRef50_Q7KNF1 Drosha n=21 Tax=Neoptera RepID=Q7KNF1_DROME 205 7e-52 UniRef50_B4S3N5 Ribonuclease III n=2 Tax=Chlorobiaceae RepID=B4S... 205 7e-52 UniRef50_Q8G7H1 Ribonuclease 3 n=20 Tax=Bifidobacteriaceae RepID... 205 8e-52 UniRef50_A8QES5 RNase3 domain containing protein n=1 Tax=Brugia ... 205 9e-52 UniRef50_B9ZJG8 Ribonuclease III n=1 Tax=Thioalkalivibrio sp. K9... 205 1e-51 UniRef50_B4RJT7 Ribonuclease 3 n=30 Tax=Neisseriaceae RepID=RNC_... 205 1e-51 UniRef50_A9FII1 Ribonuclease III n=2 Tax=Deltaproteobacteria Rep... 204 2e-51 UniRef50_A9T140 Predicted protein n=1 Tax=Physcomitrella patens ... 204 2e-51 UniRef50_UPI000180B1D8 PREDICTED: similar to ribonuclease III, n... 204 2e-51 UniRef50_C8NZK7 Ribonuclease III n=4 Tax=Erysipelotrichaceae Rep... 204 2e-51 UniRef50_C1F8X7 Ribonuclease III n=1 Tax=Acidobacterium capsulat... 203 3e-51 UniRef50_Q2RJX2 Ribonuclease 3 n=1 Tax=Moorella thermoacetica AT... 203 5e-51 UniRef50_D0LAL1 Ribonuclease III n=11 Tax=Actinomycetales RepID=... 203 5e-51 UniRef50_C7MDJ8 RNAse III n=1 Tax=Brachybacterium faecium DSM 48... 202 6e-51 UniRef50_O01326 Ribonuclease 3 n=3 Tax=Caenorhabditis RepID=RNC_... 202 7e-51 UniRef50_Q9VCU9 Endoribonuclease Dcr-1 n=61 Tax=Coelomata RepID=... 202 8e-51 UniRef50_B2UPF8 Ribonuclease III n=1 Tax=Akkermansia muciniphila... 201 1e-50 UniRef50_B8LN71 Putative uncharacterized protein n=1 Tax=Picea s... 201 1e-50 UniRef50_C7RGT7 Ribonuclease III n=4 Tax=Anaerococcus RepID=C7RG... 201 2e-50 UniRef50_C5CGL9 Ribonuclease III n=1 Tax=Kosmotoga olearia TBF 1... 201 2e-50 UniRef50_C5NVE5 Ribonuclease III n=1 Tax=Gemella haemolysans ATC... 200 3e-50 UniRef50_D2XYX5 Dicer-1 n=2 Tax=Penaeidae RepID=D2XYX5_PENJP 200 3e-50 UniRef50_B7P5Y8 Dicer-1, putative n=1 Tax=Ixodes scapularis RepI... 200 3e-50 UniRef50_A0PQ48 Ribonuclease III Rnc n=2 Tax=Mycobacterium RepID... 199 6e-50 UniRef50_B1XKP4 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7... 199 7e-50 UniRef50_B1Q0G4 Dicer-1 CG4792-PA-like protein n=1 Tax=Apis mell... 199 8e-50 UniRef50_Q8Z023 Ribonuclease 3 n=10 Tax=Cyanobacteria RepID=RNC_... 198 1e-49 UniRef50_Q1GTU3 Ribonuclease 3 n=1 Tax=Sphingopyxis alaskensis R... 198 1e-49 UniRef50_B2RFM9 Drosha protein n=1 Tax=Oikopleura dioica RepID=B... 198 1e-49 UniRef50_Q9UPY3 Endoribonuclease Dicer n=42 Tax=Euteleostomi Rep... 198 1e-49 UniRef50_B0W7S3 Endoribonuclease Dcr-1 n=3 Tax=Culicini RepID=B0... 198 2e-49 UniRef50_UPI000186E07F dicer-1, putative n=1 Tax=Pediculus human... 197 2e-49 UniRef50_Q2NJY3 Ribonuclease 3 n=14 Tax=Candidatus Phytoplasma R... 197 3e-49 UniRef50_Q86MA9 Dicer-1 n=2 Tax=Anopheles gambiae RepID=Q86MA9_A... 196 3e-49 UniRef50_Q53844 Ribonuclease 3 n=3 Tax=Mollicutes RepID=RNC_SPICI 196 3e-49 UniRef50_Q69KJ0 Ribonuclease 3-like protein 3 n=2 Tax=Oryza sati... 196 3e-49 UniRef50_A9NES4 DsRNA-specific ribonuclease III n=1 Tax=Acholepl... 196 4e-49 UniRef50_C4Q7C6 Ribonuclease III, putative n=2 Tax=Schistosoma m... 196 5e-49 UniRef50_Q1DKI1 ATP-dependent helicase DCL1 n=2 Tax=Coccidioides... 195 7e-49 UniRef50_UPI0001C41B85 ribonuclease III Rnc n=1 Tax=Methanobrevi... 195 7e-49 UniRef50_C2MCM1 Ribonuclease III n=3 Tax=Porphyromonas uenonis 6... 195 1e-48 UniRef50_A9YW43 Putative uncharacterized protein n=2 Tax=unclass... 195 1e-48 UniRef50_B0MUL3 Putative uncharacterized protein n=1 Tax=Alistip... 194 2e-48 UniRef50_C5J8U0 Dicer-1 n=3 Tax=Coelomata RepID=C5J8U0_BLAGE 194 2e-48 UniRef50_UPI000180BCF4 PREDICTED: similar to rCG20888 n=1 Tax=Ci... 194 2e-48 UniRef50_C5JNK5 Dicer-like protein n=3 Tax=Ajellomyces RepID=C5J... 194 2e-48 UniRef50_Q4SZJ7 Chromosome undetermined SCAF11600, whole genome ... 193 3e-48 UniRef50_C6XX79 Ribonuclease III n=4 Tax=Sphingobacteriaceae Rep... 193 3e-48 UniRef50_Q1IJU6 Ribonuclease III n=1 Tax=Candidatus Koribacter v... 193 4e-48 UniRef50_A7LFZ6 Endoribonuclease Dicer homolog 4 n=7 Tax=Poaceae... 193 4e-48 UniRef50_D2KU68 Dicer n=3 Tax=Eumetazoa RepID=D2KU68_HEMPU 193 5e-48 UniRef50_A4GK15 Ribonuclease III n=1 Tax=uncultured marine bacte... 192 6e-48 UniRef50_A8Y3J1 C. briggsae CBR-DCR-1 protein n=3 Tax=Caenorhabd... 192 1e-47 UniRef50_C5WU72 Putative uncharacterized protein Sb01g015670 n=2... 191 1e-47 UniRef50_B6W6L3 Putative uncharacterized protein n=1 Tax=Anaeroc... 191 1e-47 Sequences not found previously or not previously below threshold: >UniRef50_A4J683 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_DESRM Length = 246 Score = 273 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 92/225 (40%), Positives = 135/225 (60%), Gaps = 8/225 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHR 59 NRL+ +LG+ +++ LL QALTH S + HN+RLEFLGD++L +I+ LY Sbjct: 9 NRLKTRLGFKWHNPTLLIQALTHSSCVHENRGHGLCHNQRLEFLGDAVLELIISEHLYKM 68 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EG++++MRA+ V +LA++AR +LG CLR+G GE +SGG R SILAD EAL Sbjct: 69 FPDRTEGELTKMRASSVCEPSLAKVARGLDLGRCLRMGRGEERSGGRERPSILADAFEAL 128 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G ++LD ++ +LN + +D++ G +D KT LQE LQ TY ++ Sbjct: 129 LGAIYLDQGLEISRHFVLNCLSSIIDDVVAGRLDRDYKTELQEILQQSSPDPLTYTIMDE 188 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G HD+ FT G G+G S+++AEQ AA+ A + LE Sbjct: 189 SGPDHDKTFTAGVIYKG-KVIGKGSGHSKKEAEQQAAKDAFQHLE 232 >UniRef50_Q47WP5 Ribonuclease 3 n=310 Tax=Proteobacteria RepID=RNC_COLP3 Length = 266 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 143/226 (63%), Positives = 179/226 (79%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 +NP + RL +KLGY FN LL QALTHRSA HNERLEFLGDSIL +VIA ALY +F Sbjct: 3 INPHNLARLTKKLGYEFNEPLLLVQALTHRSAKGAHNERLEFLGDSILGFVIAEALYDKF 62 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P+ DEGD++RMR++LV+G TLAE+AR+F LGECL LGPGELKSGG RESIL D +EA+I Sbjct: 63 PKHDEGDLTRMRSSLVKGVTLAEVARDFNLGECLILGPGELKSGGHHRESILEDAIEAII 122 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G V+LDS+I+ + LIL+W++ RL I PG++QKDPKTRLQE+LQGR +PLPTY V+ Sbjct: 123 GAVYLDSNIECCKALILSWFERRLMVIKPGNEQKDPKTRLQEFLQGRKIPLPTYEVIDTT 182 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G++H+QEFT+ CQ S +SE V+ G+SRRKAEQ AA+Q L +E E Sbjct: 183 GQSHNQEFTVRCQTSVISEVVIAKGTSRRKAEQEAAQQILALIEKE 228 >UniRef50_UPI0000E0E146 ribonuclease III n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E146 Length = 241 Score = 267 bits (682), Expect = 2e-70, Method: Composition-based stats. Identities = 107/219 (48%), Positives = 152/219 (69%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGD 67 +LQR + Y FN LL+QALTH+SA +HNERLEFLGD++L ++ L+ FP EG Sbjct: 23 KLQRLIDYQFNDVSLLKQALTHKSAHRQHNERLEFLGDAVLGMIVGEHLFKAFPNSPEGK 82 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS 127 ++RMR+ +V+G+TLAE+A E LGE ++LG GELKSGG +R SILAD VE++IG ++LD+ Sbjct: 83 LTRMRSAIVKGDTLAEIALEKGLGEFIQLGAGELKSGGKQRYSILADVVESIIGAIYLDA 142 Query: 128 DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 + I W+ R+ ++ P KD KTRLQEYLQ R + LP Y VV ++G+ H+Q Sbjct: 143 GMNQCYDFIHAWFGARIAKLDPDVHPKDAKTRLQEYLQSRGIELPVYEVVDIKGKDHNQT 202 Query: 188 FTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 FT+ C LS+P+ G+SR++AEQ AA+ L+KL+ + Sbjct: 203 FTVSCNTVTLSDPIQAQGASRKRAEQIAAQLTLEKLQDD 241 >UniRef50_A3EU88 Ribonuclease III n=2 Tax=Leptospirillum sp. Group II RepID=A3EU88_9BACT Length = 247 Score = 263 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 81/232 (34%), Positives = 131/232 (56%), Gaps = 10/232 (4%) Query: 1 MNPI-VINRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYV 51 M P ++ L+ +L Y F +LL++A TH+S ++ +NERLEFLGD++L V Sbjct: 1 MKPHRDLSELEDRLRYRFRKIDLLEEATTHKSFMNEGRRLGVTRNNERLEFLGDTVLGLV 60 Query: 52 IANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESI 111 +A L +P+ EG +S+ + +V TLA ++R +G L +G GE + G + S+ Sbjct: 61 VAEYLMVTYPKYPEGILSKFKGRVVSEPTLASVSRALGIGGFLLIGKGEELTQGREKSSL 120 Query: 112 LADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL 171 LAD +EA+I ++LDS + I+ +++ +++ D +D KT LQEY Q L Sbjct: 121 LADAMEAVIAAIYLDSGLDAARTFIIGHFRSVIEQTVHEDSIQDYKTDLQEYCQRELETL 180 Query: 172 PTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 P Y V+ RG H +EF + + G G+G S+++AEQ AA+ AL +L Sbjct: 181 PVYQVMDQRGPDHQKEFDVAVLIRG-KIYGEGSGKSKKEAEQKAAKDALSRL 231 >UniRef50_Q1YS28 Ribonuclease III n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS28_9GAMM Length = 225 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 112/219 (51%), Positives = 149/219 (68%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 +LQ +L Y F+ +LL AL+HRS S +NERLEFLGD++L I++ L+ RFP EG Sbjct: 6 KQLQDRLQYQFSDPQLLTLALSHRSCGSNNNERLEFLGDAVLGMAISSFLFQRFPEAREG 65 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 D+SR+R+ +VR +LAE+AR+ +LG L LGPGE+KSGG RR+SIL DTVEAL+G VFLD Sbjct: 66 DLSRIRSQVVRAESLAEIARKLDLGPELLLGPGEMKSGGHRRDSILGDTVEALLGAVFLD 125 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + VE + NW+ L+ ++ KD KT LQE+LQ R PLP Y VV+ GE H + Sbjct: 126 QGLVAVEACVQNWFGASLNTLTLDTPVKDAKTALQEWLQARGKPLPEYRVVKTEGEDHSR 185 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 FT+ C++ + E T SSRRKAEQ AE+ +KKLE Sbjct: 186 LFTMSCKIDAVDETAEATASSRRKAEQLVAEKLVKKLEN 224 >UniRef50_C8W586 Ribonuclease III n=2 Tax=Clostridia RepID=C8W586_DESAS Length = 259 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 86/229 (37%), Positives = 136/229 (59%), Gaps = 8/229 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIAN 54 N I +L +++G +N + LL QALTH S + +N+RLEFLGD++L +++ Sbjct: 4 NQDNIMQLMQQVGVAWNDENLLWQALTHSSYVYESGSAAHTNNQRLEFLGDAVLELLVSG 63 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY +P EG+++++RA +V +LA++AR+ LG CLR+G GE +SGG R SILAD Sbjct: 64 YLYSSYPECAEGELTKLRAAIVCEPSLAKVARQLNLGYCLRMGKGEERSGGRERPSILAD 123 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 + EAL+G V+LD ++ L + ++++ G +D KT LQE LQ + +Y Sbjct: 124 SFEALLGAVYLDQGLEKTRMFALKFLAPVINDVLEGRVDRDYKTELQEMLQKKSPEPISY 183 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 +++ G H + FT G+ GTG S+++AEQ AA+ AL +L Sbjct: 184 VILNEEGPDHQKLFTAGVVYCGI-IIGQGTGRSKKEAEQQAAKIALLEL 231 >UniRef50_Q3AC58 Ribonuclease 3 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RNC_CARHZ Length = 235 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 87/233 (37%), Positives = 132/233 (56%), Gaps = 8/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 M+ + L++ LG+ FN+ +L A+TH S + +H NERLEFLGD++L I+ Sbjct: 1 MDKENLISLEKILGFNFNNPSILLSAITHPSYAFEHPEEGIEHNERLEFLGDAVLELFIS 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 + L+ FP+ EGD++++R+ LV +L ELA + L + LRLG GE K+GG +R S LA Sbjct: 61 DYLFRTFPQKSEGDLTKLRSRLVCAESLYELAFKINLDKFLRLGKGEFKAGGNQRMSNLA 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 + VEA+IG V+ D I+ I Y +L + KD KT LQE LQ + Sbjct: 121 NAVEAVIGAVYFDCGIEAAFSFITRLYGEKLKPENLEQLPKDEKTTLQELLQKEKNNVLR 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y ++ G H + FT ++ G G S+++AEQ AA++AL+ L+ E Sbjct: 181 YEILLEEGPPHQKIFTAGVIIND-KLIATGRGKSKKEAEQEAAKKALELLKNE 232 >UniRef50_C6HXB9 Ribonuclease III n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXB9_9BACT Length = 254 Score = 259 bits (663), Expect = 4e-68, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 127/227 (55%), Gaps = 9/227 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANAL 56 + L+ +LGY F+ E L++A H+S +++ NERLEFLGD++L V+A L Sbjct: 10 NLPVLEERLGYRFSSLERLEEATIHKSFTNETKKGGVRRDNERLEFLGDTVLGLVVAEYL 69 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 +P EG +S+++ +V +LA++AR LG L +G GE + G + SIL+D + Sbjct: 70 MRLWPDSPEGVLSKLKGRIVSEPSLAQIARNIGLGRYLLIGRGEEMTQGREKNSILSDAL 129 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+I ++ D + + IL ++ + +S G+ D KT+LQEY Q LP Y++ Sbjct: 130 EAVIAAIYQDGGLDAARQFILREFRELFESVSRGESVADYKTQLQEYCQRELETLPQYVI 189 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F + ++ + G G S+++AEQ AA+ AL+++ Sbjct: 190 TGQSGPDHQKVFEVAVRIRDKNW-GEGQGHSKKEAEQKAAKSALERI 235 >UniRef50_Q2Y871 Ribonuclease III n=2 Tax=Proteobacteria RepID=Q2Y871_NITMU Length = 230 Score = 258 bits (661), Expect = 7e-68, Method: Composition-based stats. Identities = 116/218 (53%), Positives = 148/218 (67%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 L RKLGYTF ELL+QALTHRS S HNERLEFLGD++L+ +A ++H FP + EG Sbjct: 11 AALCRKLGYTFRRPELLRQALTHRSHSIPHNERLEFLGDAVLNCAVAGLIFHHFPDLSEG 70 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 +SR+RA LV LAELA+ ELG+ +R G GELKSGG +R SILAD +EA+IG ++LD Sbjct: 71 SLSRIRANLVNQKMLAELAQTLELGKLIRFGEGELKSGGDKRPSILADALEAVIGAIYLD 130 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + + EK + N + L E++ KDPKT LQEYLQ R L LP Y VV RGEAH Q Sbjct: 131 AGFEQAEKTVENLFIPSLGELNTHALGKDPKTLLQEYLQSRKLALPRYAVVATRGEAHQQ 190 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 +F + C +S +G G+SRR AEQ AA QA ++L+ Sbjct: 191 QFQVECVISRPQIRTLGEGTSRRSAEQHAARQAYEQLQ 228 >UniRef50_B0USS1 Ribonuclease 3 n=5 Tax=Gammaproteobacteria RepID=RNC_HAES2 Length = 223 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 126/223 (56%), Positives = 175/223 (78%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRV 63 + + +LQ+KLG+ F + + L+QALTHRSA++ +NERLEFLGDSIL++ I ALY +FP+ Sbjct: 1 MQLEKLQKKLGHQFTNLDYLKQALTHRSAAAFNNERLEFLGDSILNFAIGKALYEKFPKS 60 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 +EG++SRMRATLV+ TLA +AR+ ELG+ L+LG GELKSGGFRRESIL+D VEALI + Sbjct: 61 NEGELSRMRATLVKEQTLAVVARQVELGDYLKLGAGELKSGGFRRESILSDCVEALIAAI 120 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 +LD+ I + WYQ L++I PG+ QKDPKTRLQE+LQG L LP Y V++++G+A Sbjct: 121 YLDAGIDVALARVYQWYQELLEQIKPGEAQKDPKTRLQEFLQGHRLKLPEYEVIEIKGDA 180 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H+Q F + C+V L++ V G G+SRRKAEQ AA+QA++KL+++ Sbjct: 181 HNQSFRVSCKVETLTDVVFGQGTSRRKAEQHAAQQAIEKLKIK 223 >UniRef50_B2I604 Ribonuclease 3 n=12 Tax=Bacteria RepID=RNC_XYLF2 Length = 227 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 110/215 (51%), Positives = 148/215 (68%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 Q+++GY F LL QAL HRSA + HNERLEFLGDS+++ +IA AL+ R+PR DEG ++ Sbjct: 10 QQRIGYVFTDPSLLLQALRHRSAGTPHNERLEFLGDSVVNLLIAEALFQRWPRADEGALT 69 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 R R+ LVR +LA +AR +LGE L LGPGELKSGG RR+SILAD VEA+I ++LD+D+ Sbjct: 70 RARSELVRETSLASIARTMQLGEQLILGPGELKSGGHRRDSILADAVEAVIAAIYLDADL 129 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 T ++L W++T L + G +KDPKTRLQE+LQ R LP Y ++ G+ H + F Sbjct: 130 ATCRTVVLPWFETALTALPVGKPEKDPKTRLQEWLQARQWSLPVYELIFESGDPHTKHFR 189 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + C + L G GSSRR AEQ AA A+ +L+ Sbjct: 190 VSCTLGELKLRTEGEGSSRRLAEQDAASHAIDQLD 224 >UniRef50_Q3KHL9 Ribonuclease 3 n=16 Tax=Gammaproteobacteria RepID=RNC_PSEPF Length = 229 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 115/210 (54%), Positives = 151/210 (71%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRV 63 + ++RL+R+LGYTF QEL+ ALTHRS + ++NERLEFLGD+IL++V AL+ RFP Sbjct: 3 VSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFPLA 62 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG +SR+RA LV+G TLA LAR F+LG+ LRLG GELKSGGFRRESILAD +EALIG + Sbjct: 63 REGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIGAI 122 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 +LD+ ++ + +L W + ++ D KDPKTRLQE+LQ R LP Y VV ++GE Sbjct: 123 YLDAGMEVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQGEP 182 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 H + F + C+V L+E G G SRR AEQ Sbjct: 183 HCRTFFVECEVVLLNEKSRGQGVSRRIAEQ 212 >UniRef50_Q47S78 Ribonuclease 3 n=73 Tax=Actinobacteria (class) RepID=RNC_THEFY Length = 240 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 8/230 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANA 55 ++P + Q +G ++L +ALTHRS + ++ NERLEFLGDS+L V+ + Sbjct: 5 LSPAEVREFQETVGVEIA-PDILTRALTHRSYAYENGGLPTNERLEFLGDSVLGLVVTDT 63 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY P + EG ++++RA +V LA++ARE +G +RLG GE +GG + SILADT Sbjct: 64 LYRTHPDLSEGQLAKLRAAVVNMRALADVARELGIGRYVRLGRGEEATGGRDKSSILADT 123 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EALIG V+LD + +L+ + + S D KT LQE L +P Y Sbjct: 124 LEALIGAVYLDRGLDEASELVHRLFDPLIARASGLGAGLDWKTSLQELTAAELLGVPEY- 182 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 VV+ G H + F +V+G + G G S+++AEQ AAE A K + Sbjct: 183 VVEESGPDHQKTFRATVRVAGQT-YGSGEGRSKKEAEQQAAESAWKAIRA 231 >UniRef50_Q67PF5 Ribonuclease 3 n=2 Tax=Clostridiales RepID=RNC_SYMTH Length = 235 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 7/225 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANA 55 ++P LGY F + LL +ALTH + +++H NERLEFLGDS+L VIA Sbjct: 6 LDPGRRAWCAEALGYEFRDESLLLEALTHTTYANEHPRARANERLEFLGDSVLGMVIAAH 65 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY R+P + EG+++++RA +V +LAE AR +G +R G GE S G R+S L+D Sbjct: 66 LYERYPDLPEGELTKIRAAVVCEPSLAERARVLGIGRHMRFGRGEAVS-GRDRDSTLSDA 124 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EA++G ++LD ++ ++ +L ++ G + D KT+LQE LQ + P Y Sbjct: 125 FEAVVGALYLDGGLEAAQRFVLRELGQLVEAARQGLVRVDYKTQLQEQLQRQGAAAPQYR 184 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 ++ G AH + F + G G G ++++AEQ AA QAL Sbjct: 185 LLVEEGPAHLRRFQVGVYFEG-RLLGTGWGRNKKEAEQEAARQAL 228 >UniRef50_A0L633 Ribonuclease 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=RNC_MAGSM Length = 246 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 99/232 (42%), Positives = 141/232 (60%), Gaps = 12/232 (5%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSA-----------SSKHNERLEFLGDSILSYV 51 P + RL++ L Y F +LLQ ALTHRSA ++ HNERLEFLGDS+L+ + Sbjct: 7 PSGLERLEQALDYRFTQSDLLQLALTHRSAPLDGSKAGEVVATTHNERLEFLGDSVLNLI 66 Query: 52 IANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESI 111 +++ LY RF V EG +S+ RA LV +L+E+A++ ELG LR+G GE KSGG + SI Sbjct: 67 VSHRLYKRFGEVPEGQLSQWRAMLVNTRSLSEVAKDLELGRYLRMGRGEAKSGGREKYSI 126 Query: 112 LADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL 171 L + +EAL+G ++LD + E+++ + ++ I P + KD KT LQEYLQ R L Sbjct: 127 LGNALEALLGAIYLDGGFEAAERVVDRLFAHQVAGIEPEQQGKDYKTLLQEYLQARGEAL 186 Query: 172 PTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 P Y V+ G H++ F + C G G S+R+AEQ AA+QAL+ L Sbjct: 187 PIYAVLSAEGPPHERVFVVSCH-PREQLCGHGQGRSKREAEQHAAQQALELL 237 >UniRef50_A5D1H6 Ribonuclease 3 n=3 Tax=Peptococcaceae RepID=RNC_PELTS Length = 241 Score = 253 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 135/224 (60%), Gaps = 8/224 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 + L+ +LG + + LL +ALTH S + ++ N+RLEFLGD++L +++ LY Sbjct: 8 LTLLKNRLGIAWRDEGLLTRALTHSSFTYENRQNGLENNQRLEFLGDAVLELAVSDYLYR 67 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P +DEGD++++RA++V +LA +ARE ELG CL +G GE +SGG R SILAD EA Sbjct: 68 SKPEMDEGDLTKLRASVVCEPSLARVARELELGTCLYMGKGEERSGGRDRPSILADAFEA 127 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+G V+LD ++ L + + + ++ G ++D KT LQE +Q R Y++++ Sbjct: 128 LLGAVYLDQGLEKAAGLAIKYLAPLIGDVLEGRLERDYKTELQELVQQRGGEQVQYVILK 187 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G H + FT G+ GTG S+++AEQ AA++AL K Sbjct: 188 EEGPDHHKSFTAGVLYRGV-LVGQGTGRSKKEAEQQAAKKALMK 230 >UniRef50_D1AY72 Ribonuclease III n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AY72_STRM9 Length = 233 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 131/233 (56%), Gaps = 8/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN-------ERLEFLGDSILSYVIA 53 M + + +L K+ YTF +++LL +ALTH S ++HN ERLEFLGDS++ + Sbjct: 1 MKKMDLEKLMSKINYTFKNKKLLLEALTHSSYVNEHNFPNIKDNERLEFLGDSVMDLITT 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 +Y + +EG++S++++ ++ + ++R+ LG + L GE SGG R S+L Sbjct: 61 EYIYKNNLKSNEGELSKIKSQIISETVFSTISRDLNLGNYIFLSNGENMSGGRERNSVLG 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA++G ++LDSD T ++L +++++ + + D K+ LQE Q ++ P Sbjct: 121 DVFEAMVGAIYLDSDYATTRDVVLKLLESKINNLDKIEWVSDYKSALQEITQLKYKVTPI 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y V+ G HD+ F I +V G S++ AE+ AA+QA++KL E Sbjct: 181 YTVLSEIGPDHDKTFEIEVRVE-ERLYGKGVAKSKKMAEKIAAKQAIEKLNKE 232 >UniRef50_D0L0J9 Ribonuclease III n=2 Tax=Gammaproteobacteria RepID=D0L0J9_HALNC Length = 243 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 113/217 (52%), Positives = 147/217 (67%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 +L + +G TF ELL+ AL HRSA + +NERLEFLGD++L+ VIAN LY + EG Sbjct: 15 EKLAQHIGITFASPELLEMALRHRSAGNMNNERLEFLGDAVLNLVIANQLYTMHSKATEG 74 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++SR RA+LVR +LA +ARE +LG L LGPGELKSGGFRR+SILAD +EA IG V+LD Sbjct: 75 ELSRWRASLVREESLAVIARELDLGSYLVLGPGELKSGGFRRDSILADALEATIGAVYLD 134 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + L++ ++ L ++ KDPKTRLQE+LQG LP+Y V +RG+AH Q Sbjct: 135 QGFDVAQSLLVRLFERMLQDLPDAASLKDPKTRLQEWLQGSKRELPSYEVTTIRGQAHKQ 194 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 F + C +S + VG GSSRRKAEQAAAE + L Sbjct: 195 VFEVTCTLSDTQQTAVGRGSSRRKAEQAAAESMFEAL 231 >UniRef50_Q8R9W3 Ribonuclease 3 n=37 Tax=Bacteria RepID=RNC_THETN Length = 228 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 92/224 (41%), Positives = 139/224 (62%), Gaps = 7/224 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59 + L++K+ Y F + LL +ALTH S + + NERLEFLGDS+LS VI+ LY Sbjct: 2 LTYLEQKINYEFKDKTLLLEALTHSSWAHEGKNEKVSNERLEFLGDSVLSLVISEYLYKN 61 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 ++EG +S+ RA +V +LA AR+ ELG LR+G GE SGG R+SILAD +EAL Sbjct: 62 RKDLEEGSLSKYRAEIVCEPSLARCARKIELGSFLRMGKGEEISGGRDRDSILADAMEAL 121 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 + V+LD ++ V ++IL+ ++ +DE+ G +D KTRLQE +Q + TY +V+ Sbjct: 122 LAAVYLDGGLEAVRRVILDLFKEIIDEVLKGIIYRDYKTRLQEVVQSMEVGKITYELVEE 181 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H++ F ++ + +G G S++++EQAAA +AL KL Sbjct: 182 IGPDHNKTFVTQVKIGDV-VLGIGQGKSKKESEQAAAMEALSKL 224 >UniRef50_C0GHL1 Ribonuclease III n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHL1_9FIRM Length = 233 Score = 252 bits (643), Expect = 9e-66, Method: Composition-based stats. Identities = 85/233 (36%), Positives = 133/233 (57%), Gaps = 8/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN-------ERLEFLGDSILSYVIA 53 M +N L ++L ++E+ QALTH S + +HN ERLEFLGD++L VI+ Sbjct: 1 MGKKDLNYLFKQLNIEPKNREIYIQALTHSSYAHEHNLGSHAHNERLEFLGDAVLELVIS 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 AL+ RFP + EG ++R RA +V ++L ++A ELG+ LRLG GE SGG +R S+LA Sbjct: 61 EALFKRFPLLPEGKLTRFRAGMVCEDSLFKIANSLELGKYLRLGKGEAASGGRQRPSLLA 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA++G ++LD V++ + + ++++ G + D KT +QEY Q P Sbjct: 121 DAFEAMLGAMYLDQGFYVVQETVTGIFAPLFEDMAKGSMRHDYKTLMQEYTQASLATTPE 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y +V +G H + F ++ G+G S+++AEQ AA A ++L E Sbjct: 181 YRIVAEQGPDHSKVFVAQLLLN-REVYGEGSGRSKKEAEQEAARVAYQQLRAE 232 >UniRef50_UPI0000E87AF2 ribonuclease III n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87AF2 Length = 243 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 100/223 (44%), Positives = 148/223 (66%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 MN I +++ LG+TF + L++ ALTHRSA ++NERLEFLGD IL++++A LY RF Sbjct: 15 MNSNQIEQIESILGHTFKDKALIKIALTHRSAKGENNERLEFLGDGILNFIVAELLYVRF 74 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 ++ EGD+SR+R+ LV+ +TL ++A+ +G+ L LG GELKS G+RR SILAD++EA+I Sbjct: 75 QQLSEGDLSRLRSQLVKESTLCDIAKNLTIGDFLLLGEGELKSAGWRRPSILADSLEAII 134 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD I V+ I + + I P KD K+ LQE+LQG+ + +P Y V+++ Sbjct: 135 AAIYLDDGIGKVKSFIERRFNEHIITIDPNKIHKDDKSLLQEFLQGKKIAIPEYTVIEIE 194 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 GE H Q F + C++ L+ +G G SR+ AEQ AA AL L Sbjct: 195 GEPHAQVFEVKCRIPKLNIEKIGKGPSRKIAEQNAANLALIYL 237 >UniRef50_B8CWW9 Ribonuclease III n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWW9_HALOH Length = 236 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 89/217 (41%), Positives = 135/217 (62%), Gaps = 8/217 (3%) Query: 14 GYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRVDEG 66 FN LLQ+A+TH+S + NERLEFLGDS+LS VI+ LY FP +EG Sbjct: 18 NIRFNDISLLQKAVTHKSFVHEKSDPDLEDNERLEFLGDSVLSIVISTYLYKNFPEYNEG 77 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++++MRA +V + LA ARE LG+ + +G GE +GG RESILADT+EA+IG ++LD Sbjct: 78 ELAKMRAYIVSSSHLACKARELGLGKYILMGKGEELNGGRERESILADTLEAVIGAIYLD 137 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 T+ L++N+++ + ++ G+ +D KT LQE++Q Y ++ G H++ Sbjct: 138 QGFNTITDLLINFFKDDVKKLDQGNIIRDYKTYLQEFIQKDGSCEIKYNIINEYGPDHNK 197 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 +F + +V+G E GTG S+++AEQ AA+ AL L Sbjct: 198 KFEVGVKVNG-KELGRGTGFSKKEAEQKAAKDALSNL 233 >UniRef50_Q0SMF0 Ribonuclease 3 n=21 Tax=Borrelia RepID=RNC_BORAP Length = 245 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 7/229 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANA 55 ++ L FN+ +LL AL+H S S++ +NERLEFLGDS+L+ +I + Sbjct: 14 RKAQLSEFLENLSIDFNNFDLLNTALSHSSYSNELDQKSDNNERLEFLGDSVLNLIITDH 73 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY +P EG++S+ R+ +V ++L+ +ARE +LG + LG GE + G ++ ILAD Sbjct: 74 LYKTYPNKSEGELSKARSYIVSEDSLSSIAREIDLGSYILLGRGEESNDGRNKKGILADA 133 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EA +G ++LDS + ++ + + + KD K+ LQEY+Q ++ P Y Sbjct: 134 IEAFVGAIYLDSGFLIATEFVVGLFDMYIRLMFNRGDFKDYKSLLQEYVQKKYKISPNYK 193 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + + G HD+ F + V G G G S+++AE AAE ALK +E Sbjct: 194 LDKEIGPDHDKVFCVELYV-GEKFISNGKGKSKKEAEMRAAEVALKAME 241 >UniRef50_Q7VRR0 Ribonuclease 3 n=8 Tax=Gammaproteobacteria RepID=RNC_BLOFL Length = 232 Score = 248 bits (634), Expect = 9e-65, Method: Composition-based stats. Identities = 149/223 (66%), Positives = 179/223 (80%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 + I IN LQ+KLGY F+ +LL +ALTHRS S+KHNERLEFLGDSIL+Y I N LYHR+ Sbjct: 4 IKCIEINLLQKKLGYFFHTVDLLLRALTHRSFSNKHNERLEFLGDSILNYSITNILYHRY 63 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 +DEGDMSR+R++LV TL ELA+EF+LG CL+LG GELK+ G+ RESILADTVEA+I Sbjct: 64 NHMDEGDMSRIRSSLVCSRTLVELAKEFKLGNCLKLGQGELKNKGYNRESILADTVEAII 123 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 GG+FLDS+I+T+E LI WYQ RL++I DKQKDPKTRLQEYLQ HLPLP Y + QV+ Sbjct: 124 GGIFLDSNIKTIEMLIAFWYQFRLNKIDLEDKQKDPKTRLQEYLQHHHLPLPIYCINQVQ 183 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G+AHDQ F ++CQVS L V+G GSSRRKAEQ AAE ALK L Sbjct: 184 GQAHDQIFIMNCQVSSLKYSVMGRGSSRRKAEQDAAENALKFL 226 >UniRef50_Q3A4Q8 Ribonuclease 3 n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RNC_PELCD Length = 232 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 134/224 (59%), Gaps = 8/224 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFP 61 L+ + Y F++Q LL +ALTH+S S++ NERLEFLGD++L V+++ ++ FP Sbjct: 10 LEDTIDYVFDNQALLLEALTHKSFSNEQNDRTEPDNERLEFLGDAVLGVVVSHYIFRTFP 69 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG+++R+R+ +V L + + LG+ +RLG GE +SGG ++ S+LA+T+EAL+G Sbjct: 70 HLPEGELTRIRSEVVSEKGLTVIGKAICLGDYMRLGKGEERSGGRQKSSLLANTMEALLG 129 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 VF D +V ++I + + + D KTRLQE LQ R +P Y+++ G Sbjct: 130 AVFCDGGFDSVRRVIEALFIPHIQRAARRKTGVDYKTRLQERLQARFGDVPQYVLIHADG 189 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 H + +++ G G G S++ AEQAAA+QAL+ LE Sbjct: 190 PPHQRSYSVEAHFRGSCI-GQGQGRSKKSAEQAAAKQALEYLEE 232 >UniRef50_B2A2N1 Ribonuclease 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RNC_NATTJ Length = 230 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 90/225 (40%), Positives = 137/225 (60%), Gaps = 9/225 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 I L+ KLG + + LL QA+TH S + + HNERLEFLGD++L I+ LY Sbjct: 7 DIVELKEKLGIYVDDK-LLLQAVTHTSYAHEQKDVVDHNERLEFLGDAVLELAISETLYK 65 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++P + EG+++++RA LV +L ++A + +LG+ LRLG GE +GG R S LADTVEA Sbjct: 66 KYPELPEGELTKLRAELVCELSLVKIAEKLDLGKYLRLGKGEDSTGGRDRRSTLADTVEA 125 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LIG V+L ++ ++LIL+ ++ +L I + D KT +QE +Q R+ P Y +V+ Sbjct: 126 LIGAVYLQTNYDQTKQLILDLFKDQLSHID-NQRIGDYKTMIQELVQDRYGDPPKYQIVK 184 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G HD+ F Q++ G+G S+++AEQ AA A +KL Sbjct: 185 ESGPDHDKSFVAEVQINN-EVVGRGSGKSKKEAEQNAAHFAFQKL 228 >UniRef50_C1D7L4 Rnc n=2 Tax=Proteobacteria RepID=C1D7L4_LARHH Length = 238 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 141/224 (62%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPR 62 P I+RL + +G+ F LL++ALTHRS +NER EF+GD IL+Y IA L+ FP Sbjct: 4 PQPIDRLMQHIGHLFTSPALLKEALTHRSYGQPNNERFEFVGDGILNYTIARMLFDAFPE 63 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EG +SR+RA LV TLAE+ARE LG+CL LG GE KSGG R SILAD +EA+ Sbjct: 64 LSEGQLSRLRANLVNQATLAEIARELTLGDCLFLGDGERKSGGHDRPSILADAMEAIFAA 123 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 V LD+D E ++ Y R+ I + KD KTRLQE LQ R LPLP Y ++ G+ Sbjct: 124 VCLDADFAVAENVVRRLYAARVAGIDLNRQAKDAKTRLQEMLQARRLPLPAYRILNQSGD 183 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 AH +F + C + L G GSSRR AEQ AAE+A++ +E + Sbjct: 184 AHLSQFEVACDIPQLGLATCGEGSSRRAAEQLAAERAIEAIEAQ 227 >UniRef50_B1LTR3 Ribonuclease III n=11 Tax=Alphaproteobacteria RepID=B1LTR3_METRJ Length = 259 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 92/222 (41%), Positives = 133/222 (59%), Gaps = 6/222 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRF 60 + L+ ++G++F Q+LL +ALTH S +S +RLEFLGD +L +A+ LY F Sbjct: 26 PPLTALEERIGHSFGDQDLLTRALTHTSKASGRGGSYQRLEFLGDRVLGLAVADRLYGAF 85 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P DEGD+SR A LVR T A +A +E+G L LG GE+ GG R ++ILAD EA++ Sbjct: 86 PEADEGDLSRRLAALVRRETCAAVAASWEVGPHLILGQGEVMGGGRRNQTILADVCEAIL 145 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD+ ++ + R E + + +D K+ LQE+ GR LP+PTY VV+ Sbjct: 146 GAIYLDAGFDAARAVVETHF--RPGEPTAAARGRDAKSALQEWAMGRSLPIPTYAVVERT 203 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G H F I QV GL P +G G+S+R AEQAAA +++ Sbjct: 204 GPDHAPRFRIAVQVEGLE-PGLGDGTSKRIAEQAAARALMER 244 >UniRef50_C6V631 Ribonuclease III n=2 Tax=Neorickettsia RepID=C6V631_NEORI Length = 222 Score = 247 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 123/224 (54%), Gaps = 5/224 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASS-KHNERLEFLGDSILSYVIANALYHRFPR 62 + + LQ LG F ++ELL +ALTH S ERLEFLGD++L+ V+A+ LY FP Sbjct: 1 MELEELQSLLGVHFKNKELLVEALTHPSVEKCPSYERLEFLGDAVLNLVVASMLYDLFPG 60 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG +S+ ++ LV LA LAR+ LG+C+RL E SGG + + L + +EALIG Sbjct: 61 DPEGRLSQRQSVLVCKTALAMLARQMNLGDCIRLSSSEEASGGRDKTNNLENVLEALIGA 120 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +FLD+ +TV I + + + +PK+ LQE LQ + + P Y V+ G Sbjct: 121 IFLDAGFETVTCFIQKHW--YELAVQSDSIEPNPKSALQELLQAKGMKPPVYNVIDRSGP 178 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 AH F + V G TG S++ E+ AA L++L+ E Sbjct: 179 AHLPIFEVEICVDGKKR--RATGRSKKLGEENAARMMLEELKAE 220 >UniRef50_C9RJ88 Ribonuclease III n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ88_FIBSS Length = 270 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 131/224 (58%), Gaps = 8/224 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANALYHR 59 + L+ KLGY F ELL AL HRS + +NERLEFLGDS+L+ + LY Sbjct: 21 DGLEAKLGYRFRDPELLAHALVHRSFLVGKDVPYASNNERLEFLGDSVLNMLTTEFLYRT 80 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P EG++S+ ++ +V G+ A+ ++E++L E +++G E K GG +ESILAD EA+ Sbjct: 81 YPSDPEGELSKRKSAIVSGHACAQSSKEWDLSEYVKIGKSEAKMGGRGKESILADAYEAV 140 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G V+LD ++ V ++ ++ R+ EI + K+ L E+ QG+ P Y++V Sbjct: 141 LGAVYLDGGLEEVRAILNKFHFPRVQEIISATDFVNYKSELLEFCQGKLRCSPEYVIVGE 200 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + FT+ V+G S G G +++KAEQ A+ +L+ L Sbjct: 201 EGPEHQKVFTVEVVVNGKS-YARGQGPNKKKAEQEASRLSLETL 243 >UniRef50_D2QZC7 Ribonuclease III n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZC7_9PLAN Length = 273 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 77/229 (33%), Positives = 124/229 (54%), Gaps = 5/229 (2%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALY 57 ++ + R +R+LGY FN + LL+ ALTH S + NERLEFLGD+IL + LY Sbjct: 40 VDESGLARCERRLGYVFNSKPLLRSALTHASGAEHRLASNERLEFLGDAILGVYVCEMLY 99 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +FP EGD++++++ +V T A+++ L E L LG G + S S+LAD E Sbjct: 100 RQFPDYLEGDLTKVKSVVVSRQTCAKVSEALGLQEFLILGKG-MSSSPNVPPSLLADVFE 158 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 +LI ++LD Q + I N+ ++ + G+ + K+ LQ++ Q PTY ++ Sbjct: 159 SLIAAIYLDGGEQAARQFINNYIGPEVELAAAGELGGNYKSLLQQFAQRECGNTPTYHLL 218 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 +G H + F I V G G ++++AEQ AA AL +++ E Sbjct: 219 DEKGPDHSKCFKISASVGGKKYQA-AWGRNKKEAEQRAANNALAEIKGE 266 >UniRef50_A0NMB9 Ribonuclease III n=2 Tax=Rhodobacteraceae RepID=A0NMB9_9RHOB Length = 236 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 88/226 (38%), Positives = 129/226 (57%), Gaps = 9/226 (3%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIANAL 56 P I+ L+ L Y F ELL+ ALTH SA + +RLEFLGD +L VIA+ L Sbjct: 8 PGPISALKNALQYEFRDLELLRVALTHASALPPSETVAGSYQRLEFLGDRVLGLVIASML 67 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + FPR DEG+++R +V+ T AE+A+E +G+ +R+G E ++GG ++ ++LAD Sbjct: 68 HKHFPRADEGELARRFNHMVKRETCAEIAQELGVGDAMRIGLAEAQTGGRKKTALLADIC 127 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 E++I ++LD + E I ++ R+ +S +D KT LQE+ Q + LP P Y V Sbjct: 128 ESVIAAIYLDGGFEAAESFITRLWEPRM--LSWSGPLRDAKTTLQEWAQSKSLPTPRYDV 185 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G H FT+ V GL P G G S+R AEQ AAE L++ Sbjct: 186 TSRDGPDHAPNFTVSVTVQGLP-PGEGKGGSKRIAEQNAAEAVLRR 230 >UniRef50_Q6MLR5 Ribonuclease 3 n=1 Tax=Bdellovibrio bacteriovorus RepID=RNC_BDEBA Length = 234 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 79/222 (35%), Positives = 127/222 (57%), Gaps = 8/222 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRF 60 L+ ++G+ F + LL++ALTH+S +++ HNE+LEFLGD++L V+ LY +F Sbjct: 7 KSLEERVGHQFKNPALLERALTHKSFANELRNTVEHNEKLEFLGDAVLDLVVGEFLYEKF 66 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG +S+ RA++V L+ELA E L + ++LG GE +GG ++ ++A + EA++ Sbjct: 67 PTDTEGGLSKKRASIVNEEVLSELALEMGLNKLMQLGKGEALTGGAQKPRLIASSFEAIV 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEIS-PGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 G ++LD + I + D + D ++D KTRLQE +Q P Y V+ Sbjct: 127 GALYLDGGFEVARSFIRQEFVPLADRVCGHEDFERDYKTRLQELVQKSSKETPRYEVLAE 186 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 G HD+EF + +V G G S++ AEQ AA+ AL+ Sbjct: 187 EGPPHDREFLVCVKVK-EDVWAQGRGRSKKNAEQMAAKNALE 227 >UniRef50_C9KQ86 Ribonuclease III n=4 Tax=Clostridiales RepID=C9KQ86_9FIRM Length = 247 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 86/221 (38%), Positives = 125/221 (56%), Gaps = 7/221 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPR 62 L +LG TF+ LL QALTH S +++ HNERLEFLGD++L + LY FP Sbjct: 20 LSERLGVTFHDIALLDQALTHTSYANESKRNTAHNERLEFLGDAVLELASSTYLYEHFPE 79 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EG++++ RA++V TLA+LA LG+ L LG GE GG R++ L D EA+IG Sbjct: 80 MPEGELTKTRASIVCSTTLAKLATGLHLGDYLLLGRGEEMGGGRTRQTNLEDVFEAVIGA 139 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 V+LD + + ++ + + G KD KT LQE + + Y +V G Sbjct: 140 VYLDQGWEAAQAYVVRQLRGEFENAEHGAILKDYKTILQEIVFRKEGQSIAYELVSESGP 199 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H +EFT +V+G GTG S+++AEQ AA +AL+K+ Sbjct: 200 DHAKEFTFRVRVTG-KVMGEGTGHSKKEAEQHAARRALEKI 239 >UniRef50_A9KFA0 Ribonuclease 3 n=6 Tax=Coxiella burnetii RepID=RNC_COXBN Length = 233 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 110/219 (50%), Positives = 162/219 (73%), Gaps = 1/219 (0%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 +N+L +LG+ FN+ ELL+ ALTHRS+ + +NERLEFLGDS+L ++IA+ LY R P+ E Sbjct: 4 LNKLMERLGHQFNNLELLKIALTHRSSGADNNERLEFLGDSVLGFIIASELYQRRPQARE 63 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 GD+SRMRA++V G+ LA+++ + + E L+LG GE KSGG RR SILAD +EA++G +++ Sbjct: 64 GDLSRMRASMVNGDELAQMSTKLGINEYLQLGVGEQKSGGKRRRSILADALEAIVGAIYI 123 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ ++T + +LNWY R+D++S +KD K+ LQE+LQ R LPLPTY V ++ GEAH Sbjct: 124 DAGLETCRRCVLNWYGERVDDLSKLSPKKDAKSLLQEWLQARRLPLPTYEV-KITGEAHA 182 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 Q FT++C V GL G ++RR+AEQ AA++ L+ L+ Sbjct: 183 QTFTVNCYVKGLPHKTEGVNTTRRRAEQIAAKRFLELLD 221 >UniRef50_B3DV16 Ribonuclease III n=2 Tax=Verrucomicrobia RepID=B3DV16_METI4 Length = 247 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 77/231 (33%), Positives = 125/231 (54%), Gaps = 12/231 (5%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANAL 56 + + L++K+GY F + +LL++ALTH S + +RLEFLGD++L + L Sbjct: 1 MQLEELEKKMGYAFKNPQLLEEALTHPSFFVESIRVNKGDFQRLEFLGDAVLGLAVTEKL 60 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + FP DEG ++++RA LV L LA E+G+ LRLG GE K+ G + S LA+ + Sbjct: 61 FQLFPSFDEGKLTKLRARLVSRKNLCSLASLLEIGKYLRLGKGEEKNQGRTKPSNLANAL 120 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDK----QKDPKTRLQEYLQGRHLPLP 172 E++IG ++LD + I + E+ ++ K LQE+LQ + LP Sbjct: 121 ESVIGALYLDGGWDRAKSFIFELFNPLFMELEKDPMRFVEHENSKGLLQEFLQKKGTELP 180 Query: 173 TYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 Y +V GEAH++ + + G+G S+++AE AA++A +KL Sbjct: 181 IYRIVLESGEAHNKWYEVEVSWKN-QVLGKGSGKSKKEAELRAAKEAFEKL 230 >UniRef50_C0QLB1 Two domain fusion protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLB1_DESAH Length = 520 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 79/229 (34%), Positives = 130/229 (56%), Gaps = 9/229 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANAL 56 + L++ LG+TF ++ELL+ AL H S ++ N+RLEF+GD++L I L Sbjct: 291 PRLEILEKNLGHTFANRELLENALRHSSYVNELQANQVPDNQRLEFMGDAVLGLTIGQIL 350 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 P ++EG +S+ RA LV LA +AR+ +LG +RLG GE S G + SILAD Sbjct: 351 MEEHPGMNEGSLSKARAALVSEPALASMARQIDLGRFIRLGKGERLSRGSEKNSILADAF 410 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA++ ++LD + L+ + +++ I+ + +D K+ LQE++Q + P Y + Sbjct: 411 EAVMAAIYLDCGFKQTCALVKEQFISQIKLINSAPEIEDFKSMLQEFVQEKGNTPPCYTI 470 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 + G HD+ F+I + + +G+G S++ AEQ AA+ ALK L+ Sbjct: 471 HREFGPDHDKTFSICVKACDIE--SMGSGKSKKAAEQHAAQNALKSLKK 517 >UniRef50_Q0AF70 Ribonuclease 3 n=4 Tax=Proteobacteria RepID=RNC_NITEC Length = 245 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 99/217 (45%), Positives = 140/217 (64%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVD 64 +KLGYTF +LLQ+ALTHRS +NERLEFLGDS+L+ ++ L+ RF + Sbjct: 23 DYTVFSQKLGYTFKQPDLLQEALTHRSLGFPNNERLEFLGDSVLNCAVSTLLFKRFLLLP 82 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EGD++R+RA V + L +LA +GE + LG GE KSGG +R SILA+ +EA+IG ++ Sbjct: 83 EGDLTRLRANFVNQDALHQLASALGIGELILLGDGERKSGGHQRPSILANAMEAIIGAIY 142 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 L+S + V+++I+ Y L+++ P KDPKT LQEYLQ R + LP Y + RG+AH Sbjct: 143 LESGFEKVDQVIVALYDPLLNQLDPDLFGKDPKTLLQEYLQSRKVDLPEYSTLLTRGDAH 202 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 Q F + C + + G G+SRR+AEQ AA +A K Sbjct: 203 AQVFHVECVIPEFAIRTSGEGTSRRRAEQEAARRAYK 239 >UniRef50_B0S1M6 Ribonuclease III n=2 Tax=Finegoldia magna RepID=B0S1M6_FINM2 Length = 238 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 82/228 (35%), Positives = 126/228 (55%), Gaps = 9/228 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 ++ L+ KL Y F LL A H S +++ NERLEFLGDS+L V+++ LY+ Sbjct: 9 LHELEEKLDYRFTDINLLNLAFFHSSYGNENKAYKNISNERLEFLGDSVLDLVVSDFLYN 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 + EG M+++R+ +V + + +A+ ELG+ L +G GE SGG + S+LADT EA Sbjct: 69 SKSSLKEGAMTKIRSQMVCEKSFSNMAKYLELGKYLMMGHGEFISGGSEKPSVLADTFEA 128 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRL-DEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 + G ++LDS ++ K++ N +++ EI D KT LQE Q + Y +V Sbjct: 129 VFGAIYLDSGYESAFKIVENKFKSLFIAEIETKSSFIDYKTMLQENNQKKSRDKLKYKIV 188 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 + G HD++F + G G GSS++ AEQ AA AL KL + Sbjct: 189 KEEGPDHDKKFYVDVY-EGNLVIGSGFGSSKKHAEQDAARNALIKLRV 235 >UniRef50_Q5LZ68 Ribonuclease 3 n=100 Tax=cellular organisms RepID=RNC_STRT1 Length = 237 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 91/224 (40%), Positives = 132/224 (58%), Gaps = 9/224 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHR 59 +L++ G F+ ++LL+ A TH S +++H NERLEFLGD+ L VI+ LY+R Sbjct: 14 QKLEQDFGIVFSQKDLLETAFTHTSYANEHRLLNISHNERLEFLGDAALQLVISVYLYNR 73 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P EG+MS+MR+T+VR +LA + + +RLG GE KSGG R +IL D EA Sbjct: 74 YPNKPEGEMSKMRSTIVREESLAGFTKACGFEQYIRLGKGEEKSGGRERATILGDLWEAF 133 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G ++LD + VEK + ++++ D+ D KT LQE LQ TY V+ Sbjct: 134 LGALYLDQGLPAVEKFLNQVMIPQVEK-GNFDRVIDYKTALQERLQVNGKVDITYTVIDE 192 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G AH +EFT+ V G E G G S++ AEQAAA+ AL++L Sbjct: 193 SGPAHAKEFTMQVAVDG-KELSTGLGKSKKLAEQAAAKSALEQL 235 >UniRef50_B8FKR2 Ribonuclease III n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKR2_DESAA Length = 535 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 127/229 (55%), Gaps = 8/229 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALY 57 + L+ LGY F ELL +A+ H S ++H NERLEFLGD++L+ +++ L Sbjct: 305 DLGLLEEALGYNFKTPELLLEAMCHSSYVNEHPDCTWTHNERLEFLGDAVLNLAVSDMLM 364 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 ++ EGD+SR+RA+LV LAE+AR +G+ L LG GE + G+ + SILAD++E Sbjct: 365 SKYSENREGDLSRLRASLVNEGQLAEIARSLGIGQHLLLGKGEARGRGWDKNSILADSLE 424 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+ GG++ DS K+I N + E +D KTRLQEY Q + P+Y ++ Sbjct: 425 AVFGGIYSDSGYADAFKVIKNLIAPLIPEEVAVAAAQDYKTRLQEYAQSKLRITPSYELI 484 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + G H++ F V+ G G S++ AEQ AA + L L E Sbjct: 485 REFGPDHEKTFVAQATVN-KEFTSQGKGRSKKAAEQDAAREVLILLGQE 532 >UniRef50_Q053L4 Ribonuclease 3 n=4 Tax=Leptospira RepID=RNC_LEPBL Length = 247 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 7/225 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHR 59 +L +K+G F+ E A H S +++ NERLEFLGDS+L V A +L+ + Sbjct: 21 FKKLSKKIGIKFSKIEYYNTAFIHSSYKNENPEILEDNERLEFLGDSVLGLVAARSLFQK 80 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P+ EG++SR+++ +V L +A + LGE L LG GE S G R I A+ E+L Sbjct: 81 YPKASEGELSRIKSKIVSTPILNSIAEKLNLGEYLLLGKGEKNSQGKGRRKIAANLFESL 140 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G ++LD + EK I+ + + +D KT+LQEY Q LP Y + Sbjct: 141 VGAIYLDRGFEVAEKFIVQHLLEFAENPDMEESVRDYKTQLQEYSQKHFKTLPVYRMKGE 200 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H + F + ++ G G+S++ AEQ AA++ ++ Sbjct: 201 SGPDHSKMFQVSVRIRD-QWEASGYGASKKIAEQNAAKELYIRIR 244 >UniRef50_A5EV51 Ribonuclease III n=2 Tax=Cardiobacteriaceae RepID=A5EV51_DICNV Length = 233 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 111/216 (51%), Positives = 146/216 (67%), Gaps = 2/216 (0%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61 I L+ LGY+F + ELLQ+ALTHRS S+ HNER E+LGD++L VI+ ALY R+P Sbjct: 5 PKINWQLLEHALGYSFQNPELLQRALTHRSFSADHNERFEYLGDALLETVISVALYRRYP 64 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EGD++R+RA +V+ ++LA +A++ +LG LRLG GELKSGG RRESILAD VEA+I Sbjct: 65 ESPEGDLTRLRAAIVKSSSLAVIAKQLDLGRYLRLGSGELKSGGKRRESILADAVEAIIA 124 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+LDSD E++ L + + + + KDPKTRLQEYLQ R LPLP Y +V+ +G Sbjct: 125 AVYLDSDFYRCEQITLALFAPAIAALPDVEALKDPKTRLQEYLQSRDLPLPVYELVEEKG 184 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 H + FTI + T SSR+KAEQAAAE Sbjct: 185 PEHAKIFTISAK--SERFCTTATASSRKKAEQAAAE 218 >UniRef50_Q2LVR4 Ribonuclease III n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVR4_SYNAS Length = 240 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 83/226 (36%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALY 57 + +L+ L F LL AL HRS +++ NERLEFLGD++L I++ L Sbjct: 8 ALKKLESHLSCAFRDITLLDNALVHRSYVNENPSLSFADNERLEFLGDAVLELCISDLLM 67 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 FP EG +S++RA++V LAELA++ +G + LG GE SGG + SILA+T+E Sbjct: 68 KAFPDYSEGQLSKLRASVVNEQPLAELAKKCRIGSFILLGKGEESSGGRSKPSILANTME 127 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+ VFLD + + + ++E + KD KT LQE Q R +P Y ++ Sbjct: 128 AITAAVFLDGGFDRAYEFVRRLFTPLIEEGNRSATYKDYKTTLQELSQNRFREIPRYRLI 187 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G HD+ F + G+ E G G S+++AEQ AA +AL +L Sbjct: 188 GEYGPDHDKLFESGLSIPGIIET-TGKGKSKKEAEQHAAHKALDEL 232 >UniRef50_D0GJ73 Ribonuclease III n=2 Tax=Leptotrichia RepID=D0GJ73_9FUSO Length = 238 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 136/233 (58%), Gaps = 8/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 M + L K+ Y F ++ L++ALTHRS S++H NE+LEFLGD++L+ + Sbjct: 1 MKIKNVEELMEKIDYKFRNESYLKEALTHRSFSNEHEKSKNFDNEKLEFLGDAVLNLITT 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 +Y+ +EG+++++++ ++ + +A E LG+ L L GE SGG +R+SIL Sbjct: 61 EYIYNSGKGKNEGELAKLKSQIISEPVFSAIAAEIGLGDYLYLSNGEESSGGRKRKSILG 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EALIG VFLDSD T + L + +++ + + D KT LQE Q ++ +P Sbjct: 121 DAFEALIGAVFLDSDYYTAKNTALKFLPDKINNLEDIEGIIDYKTVLQEVFQSKYKKMPE 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y ++ +G H++ F I +++ +G G S+++AE+ AA++A++ +E + Sbjct: 181 YEILDTKGPDHNKVFEISVKLNN-KIIGIGRGKSKKEAEKRAAKEAIEFIENK 232 >UniRef50_Q72C44 Ribonuclease 3 n=9 Tax=Desulfovibrionaceae RepID=RNC_DESVH Length = 253 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 126/227 (55%), Gaps = 7/227 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 ++ LQ+ +G+ F ELL A+TH S +++ HNERLEFLGD++L ++ L+ Sbjct: 28 PVDELQKTIGHRFGDMELLLTAMTHSSWANEQAVPVEHNERLEFLGDAVLELCVSEELFR 87 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP EGD++RMR+ LV +L +ARE L LRLG GE GG R S+L+D +EA Sbjct: 88 RFPSAREGDLTRMRSRLVSKPSLEGVARELRLDMSLRLGKGEESQGGRERGSLLSDALEA 147 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G VFLD+ + +++ E + KD K++LQE Q P Y ++ Sbjct: 148 MLGAVFLDAGYIAAKGVVMRILGPHFPEALVPVRTKDYKSQLQELTQKLFRDRPVYTLLG 207 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 G HD++F + + + TG S ++AEQ AA +A+ L+ Sbjct: 208 SSGPEHDKQFDVRVVLPDGTV-FEATGPSMKRAEQMAAARAVATLDK 253 >UniRef50_B0VFA5 DsRNA-specific ribonuclease n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFA5_9BACT Length = 255 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 128/227 (56%), Gaps = 10/227 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNE---------RLEFLGDSILSYVIANAL 56 +++LQ+K+ YTF+ LL ALTH+S +H E R+EFLGDSIL ++++ L Sbjct: 28 LSQLQKKIDYTFHDPTLLYAALTHKSYLHRHFEDHKTPSPFERMEFLGDSILGFIVSKEL 87 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + R P EG +S++++ +V L A+ +LG+ L L P E +SGG + SIL+D + Sbjct: 88 FTRHPDEQEGKLSKLKSKIVSETYLTLKAKAIDLGKYLLLSPEEQQSGGASKPSILSDAM 147 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EALI ++LDS I + I N E ++ + K+ LQEY+Q R+ P PTY+ Sbjct: 148 EALICAIYLDSGISAATRFIRNHILNNYQETVTREELVNYKSILQEYMQSRNQPPPTYVT 207 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 V +G H + F + + G G G++++ A Q AA A +KL Sbjct: 208 VAEQGPEHHKTFVVEVRW-GNKLLGTGKGNTKKNAHQEAARMACQKL 253 >UniRef50_B9M911 Ribonuclease III n=1 Tax=Geobacter sp. FRC-32 RepID=B9M911_GEOSF Length = 238 Score = 242 bits (617), Expect = 9e-63, Method: Composition-based stats. Identities = 81/227 (35%), Positives = 130/227 (57%), Gaps = 8/227 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 I L++ + Y F + LL +ALTH S ++ N+RLEFLGD+++ V+++ L+ Sbjct: 9 IAALEKLINYDFTDKSLLVEALTHPSFVNESGGKVRQDNQRLEFLGDAVVGLVLSHDLFS 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP EG+++++RA+LV +LA LAR +LG L+LG GE +SGG + S+LAD EA Sbjct: 69 RFPDSREGELTKLRASLVDEASLAILARAIDLGAHLKLGRGEERSGGRTKPSLLADAYEA 128 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+ V+LD I+ +I + + + +++ + +D KT QE P YL+ Sbjct: 129 LLAAVYLDGGIEPAAAIIKSHFASFMEKRNIRTSGRDFKTEFQELAHRLRSLAPRYLLQG 188 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 V G H + F++ + G G S+++AEQAAAEQ + L+ Sbjct: 189 VSGPDHQRIFSVAVFI-GEEFMGEGLAKSKKEAEQAAAEQGIAFLKK 234 >UniRef50_B0PD50 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD50_9FIRM Length = 232 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 9/223 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRF 60 + L+ ++GYTF + L ALTH S +++ NER EFLGD++LS V+++ L+H + Sbjct: 11 SALEGRIGYTFQNGRYLDIALTHSSYANEVKKNISSNERQEFLGDAVLSIVVSDYLFHTY 70 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 + EGD++++RA LV +L E ++ LG+ L+LG GE GG R SILAD EALI Sbjct: 71 -HLAEGDLTKLRAALVCEKSLWEFSQALGLGDFLKLGRGEEMMGGRTRPSILADAFEALI 129 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD I+ + +L + L+ D KT LQE +Q +Y++V Sbjct: 130 AAIYLDGGIEPARRFVLGYIVDALEN-RDDLAFSDYKTMLQEIIQKNPEERLSYVLVNES 188 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H+++F + +++ + VG G S++ AEQAAA +ALK + Sbjct: 189 GPDHNKKFLVEVRLN-SNVIGVGCGGSKKSAEQAAAREALKLM 230 >UniRef50_Q1Q4S0 Similar to ribonuclease III n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4S0_9BACT Length = 236 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 80/225 (35%), Positives = 129/225 (57%), Gaps = 5/225 (2%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN---ERLEFLGDSILSYVIANALYH 58 NP Q +GY+F LL++ALTH S ++N ERLEFLGD++L +I++ LY Sbjct: 9 NPEKFIACQNIIGYSFKKMLLLEKALTHTSCRVENNFSNERLEFLGDAVLGMIISDYLYK 68 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P EG+++ +++ +V +TLA++ E L E L +G G F + S+LA+ EA Sbjct: 69 TMPHYSEGELTNVKSVVVSQSTLAKVGMEAGLKEFLLVGRGLNDRDLFPK-SLLANVFEA 127 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LI +++D I+ + L + + +D + +K+ K+ LQ+Y Q + PTY ++Q Sbjct: 128 LIAAIYIDGGIEAASEFTLRYLKKEIDLVCKNQHKKNYKSILQQYSQKEYGITPTYRLLQ 187 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F I + G SE G G S+++AEQ+AA++ALK L Sbjct: 188 QIGPDHGKSFEIVVSIKG-SEYGRGWGKSKKEAEQSAAKEALKIL 231 >UniRef50_D2RKZ6 Ribonuclease III n=2 Tax=Acidaminococcus RepID=D2RKZ6_ACIFE Length = 234 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 88/227 (38%), Positives = 128/227 (56%), Gaps = 9/227 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANALY 57 + L R+LG LL ALTH S + + HN+RLEFLGDS+LS V++ +Y Sbjct: 9 LEGLCRQLGMEMKDLHLLDMALTHTSYAYESKKNPRPQHNQRLEFLGDSVLSLVVSTHIY 68 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 P++DEG++S++RA LV TLA+LA E LG+ L LG GE+ G SILAD E Sbjct: 69 KTCPQMDEGELSKLRAFLVCEETLAQLATENHLGDHLLLGKGEINLDGEENPSILADAFE 128 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 +++G +LD V L+ +R+ E++ +D KTRLQE +Q Y V Sbjct: 129 SVLGAYYLDQGFARVTGLLNRLLISRIPELTADGIDRDYKTRLQEVVQKDGPAEILYDQV 188 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G +H++ F + V+G +E G G ++++AEQ AA +ALK L Sbjct: 189 SAEGPSHNRTFVMRVLVNG-NELGKGRGRTKKEAEQRAAREALKALR 234 >UniRef50_B3T0T1 Putative RNase3 domain protein n=2 Tax=prokaryotic environmental samples RepID=B3T0T1_9ZZZZ Length = 224 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 94/217 (43%), Positives = 135/217 (62%), Gaps = 1/217 (0%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 +++ Y F LLQ ALTHRS S +NERLEFLGD+ L VI+ LY + EG +S Sbjct: 9 EQRFHYRFKDDILLQTALTHRSHSVDNNERLEFLGDAALDLVISELLYQSYSEQTEGYLS 68 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 RMR++LV+GNTLAELA+E ++G L LG GE SGG R S+L+DT+EA+IG +FLD Sbjct: 69 RMRSSLVKGNTLAELAKELDVGGYLILGKGENTSGGRERLSLLSDTLEAMIGAIFLDGGY 128 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 V+ +I+ + +R+ + P + KD K+ LQE LQG LP Y +V+ G H++ F Sbjct: 129 VAVKNVIIKIFDSRIQALDPKSEHKDHKSVLQEKLQGVKQGLPVYSLVRSVG-DHNKTFV 187 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + C + +G + R AEQ AA +AL+ ++ + Sbjct: 188 VECSIKSGEIVTQASGKTLRVAEQKAASKALQAMQND 224 >UniRef50_B2KC89 Ribonuclease III n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC89_ELUMP Length = 221 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 137/224 (61%), Gaps = 10/224 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFP 61 N +++ L Y+F ++EL+++ALTH+S + + HNERLEFLGDS+L V A +Y ++P Sbjct: 3 NDIEQVLDYSFKNKELIREALTHKSFTGERRSVKHNERLEFLGDSVLGLVAAEYIYSKYP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 V+EG +S++++ LV + L A E +LG L LG GE +GG RESIL++ +EA++G Sbjct: 63 EVEEGVLSKIKSGLVSRHNLYLWASELDLGAYLALGAGEAATGGRTRESILSNAMEAVLG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+LD ++V+ +I W S + D K+ LQE +Q ++ +P Y V+Q G Sbjct: 123 AVYLDGGFESVKNIINKWI----STQSLTEVSSDYKSTLQEIVQKKYKSVPEYEVIQTVG 178 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 H++ FT+ S E G G +++ AEQ AA+ AL+ L+ Sbjct: 179 PEHEKIFTVVVS-SLKKELGRGRGKNKKLAEQDAAKNALENLKK 221 >UniRef50_C9L8J0 Ribonuclease III n=4 Tax=Clostridiales RepID=C9L8J0_RUMHA Length = 263 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 81/232 (34%), Positives = 130/232 (56%), Gaps = 11/232 (4%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIAN 54 N L++K+GY F + +LL ALTH S +++H NERLEFLGD++L + Sbjct: 30 NSKKFLELEKKIGYEFENFDLLVNALTHSSYANEHHIAYKENNERLEFLGDAVLELTSSE 89 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 L++++ + EG +++ RA++V TLA A+E LG+ L LG GE +GG R SI++D Sbjct: 90 FLFYQYADLPEGKLTKKRASIVCEPTLALCAKEISLGDYLLLGKGEEATGGRNRNSIISD 149 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 +EALIG ++LD ++ + + +I D KT LQE +Q ++ Y Sbjct: 150 AMEALIGAIYLDGGFANAKEFVHKYILN---DIENKQLFYDSKTTLQEIVQAQYEDDVKY 206 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 ++V+ G H++ F + + G + G G +++ AEQ AA A+KKL E Sbjct: 207 VLVKEEGPDHNKSFYVEALL-GDKKLGEGCGHTKKAAEQQAAYCAIKKLRDE 257 >UniRef50_A0LGM1 Ribonuclease 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=RNC_SYNFM Length = 242 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 13/238 (5%) Query: 1 MNPIV-INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVI 52 M P + LQ LGY F + LL +AL HRS ++ NE LEFLGD++L I Sbjct: 1 MKPSDGLEALQNLLGYRFGDEGLLHRALVHRSYLHENPHLDEKDNETLEFLGDAVLGLAI 60 Query: 53 ANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESIL 112 ++ L +FP +EG++SR+R+ +V L +A E LGE L LG GE +GG R+ S+L Sbjct: 61 SHFLLEQFPDYNEGELSRLRSAIVNERELTRIAVELNLGEYLLLGKGEEMTGGRRKASLL 120 Query: 113 ADTVEALIGGVFLDSDIQTVEKLILNWYQTR----LDEISPGDKQKDPKTRLQEYLQGRH 168 AD++EAL+ ++LD + V +I + E KD KT+LQE Q R+ Sbjct: 121 ADSLEALLASIYLDGGLDAVLGVIKKLFDVYLRFEKREHVLKALDKDYKTQLQELTQARY 180 Query: 169 LPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 P Y++ + G HD+ F ++ + G G+G S++ A+QAAAE+AL+ + + Sbjct: 181 KLTPVYVLDREEGPDHDKTFHMNVVLEGQVLAG-GSGKSKKDAQQAAAEKALQIIAAD 237 >UniRef50_A8ZZF3 Ribonuclease III n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZZF3_DESOH Length = 231 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 79/225 (35%), Positives = 124/225 (55%), Gaps = 9/225 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFP 61 L++ L Y F LL +AL H S ++ NERLEFLGD+ LS I + L RFP Sbjct: 6 LEQHLVYRFTDTGLLAKALRHSSYVNEQADPAMEDNERLEFLGDAALSLCIGHLLMARFP 65 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EGD+S+ RA LV LA++ R LGE + LG GE ++ G ++SILA+ VEAL+G Sbjct: 66 ELSEGDLSQTRAGLVNAGWLADIGRSMNLGEYVLLGKGEEQTNGRNKDSILANAVEALLG 125 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD V ++ + ++ ++ ++ D ++ K+ LQE Q PTY ++ G Sbjct: 126 AIYLDGGFDAVMAVVRHKFENDIEALAALDMNRNYKSLLQELTQATDGKAPTYEIIDETG 185 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 HD+ F + G+G +++ A+Q AA +AL ++ E Sbjct: 186 PDHDKTFHCRVSAGDIQ--AEGSGKNKKTAQQDAAHKALALIKGE 228 >UniRef50_D1ATS9 Ribonuclease 3 n=1 Tax=Anaplasma centrale str. Israel RepID=D1ATS9_ANACI Length = 249 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 80/227 (35%), Positives = 125/227 (55%), Gaps = 6/227 (2%) Query: 1 MNPIVIN-RLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANAL 56 ++ + R+ GY F +LL ++LTH S S + + ERLEFLGD++LS ++ L Sbjct: 8 IDKENLACRVYEVTGYRFRDLDLLLESLTHPSLSRESAANYERLEFLGDAVLSMAVSEML 67 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 Y FP DEG +++ R LVRG+ + E+AR LG + + GE+ GG L + + Sbjct: 68 YRLFPDDDEGCLTQKRTALVRGSEVVEIARSIGLGGLILMSSGEMSCGGSDNPGTLENAL 127 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EALIG +++D + + I + +R +S +DPKT LQE++Q R +P Y + Sbjct: 128 EALIGAMYIDGSSEDYKNFIREHWFSRAQRMSSAP-PQDPKTALQEWVQSRGWTVPLYKL 186 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 V G H F + + G + GTGSS++ AEQ AA+ LK++ Sbjct: 187 VSKSGPEHKPVFAVEVSIQGHGSIL-GTGSSKKLAEQEAAKLMLKRI 232 >UniRef50_C7NB47 Ribonuclease III n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NB47_LEPBD Length = 232 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 79/226 (34%), Positives = 142/226 (62%), Gaps = 8/226 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHR 59 L +K+GY F +++ L++ALTHRS S++ +NE+LEFLGD+IL+ + +Y Sbjct: 8 KDLIKKIGYEFKNKKYLEEALTHRSYSNEAEKTRRFNNEKLEFLGDAILNLITTEYIYDL 67 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 + + EG+++++++ ++ + +A + +LGE L L GE+ SGG R SIL D EAL Sbjct: 68 YGKKTEGELAKLKSQIISEPVFSTIASDIKLGEYLYLSNGEIMSGGRNRRSILGDAFEAL 127 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG +F DSD T + + L + +++++ + D KT LQE++QG++ +P Y +++ Sbjct: 128 IGAIFKDSDYYTAKNVALKFLLGKINKLEEIEGTGDYKTILQEFVQGKYKKMPEYKLLRT 187 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 +G H++ F I + + +GTG S+++AE+ AA++AL+KL+ Sbjct: 188 KGPDHNKVFEICVRWND-KIYGIGTGKSKKEAEKHAAKEALEKLKK 232 >UniRef50_D0MGH0 Ribonuclease III n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGH0_RHOM4 Length = 260 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 8/227 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYH 58 + ++R + L +QALTHRS NERLEFLGD++L +V+A LY Sbjct: 26 LEIVRRLTDLPVRNAALYEQALTHRSVLRGQPDSHLHSNERLEFLGDAVLGFVVAAYLYE 85 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 FP +EG ++R+RA LV LA+ AR LG +RL ++GG +SIL+D EA Sbjct: 86 HFPDRNEGFLTRLRAKLVNREALAQAARRLGLGAHVRLSENMERAGGRDNDSILSDAFEA 145 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+G ++LD ++ + LD + + + K+ L E+ Q R P P Y VV Sbjct: 146 LVGAIYLDLGLEAARAFVERALLAPLDLEALARRPDNYKSLLLEFAQARGWPQPRYRVVA 205 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 G +H + FT+ + G GT S+++AEQ AA +AL +L+ Sbjct: 206 EEGPSHARTFTVEAWI-GNRRLGRGTAGSKKQAEQQAAREALARLQA 251 >UniRef50_A8SMU0 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMU0_9FIRM Length = 237 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 86/228 (37%), Positives = 124/228 (54%), Gaps = 8/228 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANA 55 ++N L LGY F ELL A HRS ++ NERLEFLGD IL ++++ Sbjct: 6 RKELLNELMEVLGYKFKDLELLNLAFVHRSYLNECKDATISNERLEFLGDVILGFIVSVE 65 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY +FP DEG ++++R+ +V + + AR F LG+ L LG GE GG R SILADT Sbjct: 66 LYEQFPNSDEGYLTKIRSKVVCEESFSYAARTFNLGKYLLLGKGEDSFGGRNRNSILADT 125 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQT-RLDEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 EAL G ++LD + V ++ ++ + +I KD K+ LQEY +Y Sbjct: 126 FEALFGALYLDGGMDVVTEIANKYFFDTVVYKIDKNIFIKDYKSYLQEYFHKNATTKISY 185 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +V RG HD+EF + + + GTG ++++AEQ AA AL K Sbjct: 186 TLVAERGPDHDKEFDMCVNIDDV-VKGYGTGKNKKQAEQQAARDALIK 232 >UniRef50_A5VKP2 Ribonuclease 3 n=25 Tax=Lactobacillus RepID=RNC_LACRD Length = 233 Score = 238 bits (609), Expect = 8e-62, Method: Composition-based stats. Identities = 74/232 (31%), Positives = 120/232 (51%), Gaps = 13/232 (5%) Query: 6 INRLQRKL----GYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIAN 54 I LQ L F++ LL +A T S ++H ER+EFLGD++L +++ Sbjct: 2 IEELQDYLAKEFNIHFDNPALLAEAFTQASYVNEHPNQGLKYYERIEFLGDAVLELIVSE 61 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 +Y RFP + +G ++R+RA +V ++ ++ A+E + +RLG GE +G R +L D Sbjct: 62 YIYKRFPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGHGEEMAGARERPGLLCD 121 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 E+ IG ++LD VEK + + ++ D D KT LQE+LQ Y Sbjct: 122 IFESFIGALYLDQGRPAVEKFVQRVIFPK-LDMGWFDHAVDAKTSLQEFLQRDGDIAIEY 180 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 +V+ G +D EF ++ +G G GSS++ AE AA+QAL + + Sbjct: 181 HLVEESGTENDPEFKVNVTANG-DVIGEGKGSSKKHAEMQAAQQALDNMRNK 231 >UniRef50_A6DSV3 Ribonuclease III n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSV3_9BACT Length = 232 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 7/229 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALY 57 I L+ L FN LL++ALTHRS + N+RLEFLGD+++ +++ L+ Sbjct: 3 ISFKVLEDNLKCKFNQPTLLREALTHRSYKFESKEPLNDNQRLEFLGDAVIELIVSRYLF 62 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 R+P EGD+++ RA LV+ + L E A+ +LG+ L LG ELKS G R S L+D E Sbjct: 63 DRYPDAPEGDLTKYRAALVKESALFECAKSIKLGKYLLLGKSELKSQGNERPSNLSDAYE 122 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 AL+ ++LD +T + +N + DE + ++PK LQE Q H P Y+ + Sbjct: 123 ALMAAIYLDQGYETAQSFHINILEKLWDEPADLLLVQNPKGTLQELTQKNHGSPPKYITI 182 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD + + C ++ G G + + A++ AA +A+ L+ E Sbjct: 183 SKTGPEHDPLYKVECILN-KELISKGQGKTLKAAQENAARKAIHCLKEE 230 >UniRef50_C8PI53 Ribonuclease III n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PI53_9PROT Length = 303 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 129/222 (58%), Gaps = 3/222 (1%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRV 63 + +LQ KLGY F +Q L+ ALTH+SA + HN ERLEFLGD+++ ++ L+ +F Sbjct: 3 NLEKLQEKLGYKFKNQTHLKIALTHKSAKNGHNNERLEFLGDAVMDLIVGEYLFKKFSS- 61 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 DEGD+S++RA LV ++ ++ A+ +GE L + E ++GG + S+L+D EA++G V Sbjct: 62 DEGDLSKLRAALVNESSFSKFAKFLGIGENLNMSLSEERNGGREKPSLLSDAFEAIMGAV 121 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 +L+S +Q ++ + + IS + +D KT LQE Q + P Y+++ G Sbjct: 122 YLESGLQNTARIAIAILEILYPRISFNELVRDYKTALQELTQAKFGVTPEYILLGSSGPD 181 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 H + F + V G G+S+++AEQ A+ A+ L+ Sbjct: 182 HKKSFEMAALVGG-KWLSSAVGASKKEAEQKCAQIAIDLLQN 222 >UniRef50_C2EW95 Ribonuclease III n=4 Tax=Lactobacillaceae RepID=C2EW95_9LACO Length = 251 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 9/227 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHR 59 + L ++ F + +LL +A T S ++H ER+EFLGD++L +++ +Y R Sbjct: 25 DYLAKEFDIHFTNPDLLAEAFTQASYVNEHPHQGLKFYERIEFLGDAVLELIVSEYIYKR 84 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP + +G ++R+RA +V ++ ++ A+E + +RLG GE +G +R +L D E+ Sbjct: 85 FPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGHGEEMAGARQRPGLLCDIFESF 144 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG ++LD VEK + + ++ D D KT LQE+LQ Y ++Q Sbjct: 145 IGALYLDQGRPAVEKFVRRVIFPK-LDLGWFDHAVDAKTSLQEFLQRDGDVDIEYHLLQE 203 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G +D EF ++ G GTGSS++ AE AA QAL KL E Sbjct: 204 SGTENDPEFKVNVSADG-KVIGEGTGSSKKHAEMKAASQALNKLRQE 249 >UniRef50_C9LMI7 Ribonuclease III n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMI7_9FIRM Length = 249 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 8/213 (3%) Query: 18 NHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 ++ ELL ALTH S +++H NERLEFLGD++L + + L+ RFP EGD++R Sbjct: 27 HNMELLNVALTHTSYANEHRNLKVHDNERLEFLGDAVLDLAVGDYLFRRFPEWPEGDLTR 86 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 +A++V AE A F +G+ + LG GE SGG R SIL + E++IG V+LD+ + Sbjct: 87 AKASVVCKPACAECAANFHVGDYMLLGRGEEMSGGRTRVSILGNAFESVIGAVYLDNGYE 146 Query: 131 TVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 K IL Q LD + G D K+ LQE Q Y VV+ G HD+ + Sbjct: 147 VAAKFILGHMQKFLDLVDQGIYDHDYKSDLQEIAQKNGDVDIRYEVVRDEGPDHDKTIWM 206 Query: 191 HCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 ++G + G G ++++A Q AA++A+++L Sbjct: 207 ELFINGKA-LGTGIGKNKKEAAQNAAKEAIERL 238 >UniRef50_C4V2U1 Ribonuclease III n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2U1_9FIRM Length = 238 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 80/215 (37%), Positives = 116/215 (53%), Gaps = 7/215 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59 + RL L F LL++ALTH S ++ HNERLEFLGD++L I+ LY Sbjct: 13 LVRLSAFLDVDFADLSLLEEALTHPSYVNEARERATHNERLEFLGDAVLELAISTYLYVA 72 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P EG++++MRA+LV+ TLA LAR LG LR+G GE+ GG R++ L + EA+ Sbjct: 73 YPHCSEGELTKMRASLVQSETLARLARRLHLGAHLRMGRGEMLGGGAERQNNLENVFEAV 132 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG V+LD + + + + +D KT LQEY+QG Y V Sbjct: 133 IGAVYLDRGWDAAYSYVQRQFTEEVTRLRQEHAVQDYKTMLQEYVQGHRHECIAYEQVAE 192 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQA 214 G HD+ FT+ ++ G+ G G S+++AEQ Sbjct: 193 SGPDHDKRFTMRVRI-GMEVLGEGIGRSKKEAEQH 226 >UniRef50_B0TGW4 Ribonuclease 3 n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=RNC_HELMI Length = 235 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 82/226 (36%), Positives = 120/226 (53%), Gaps = 9/226 (3%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANA 55 P L R++G L+ ALTH S +HN+RLEFLGD++L VI Sbjct: 5 PNHPAELARRIGIASEDLATLEMALTHPSFVYENPQAPPEHNQRLEFLGDAVLGLVIGEQ 64 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ R+P EG++SR RA +V LA+ AR +LG L+LG GE SGG + SILAD Sbjct: 65 LFVRYPTWTEGELSRRRAAVVCEANLADGARRLQLGAWLKLGRGEEASGGREKPSILADA 124 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EA+IG +FL I+ + I++ + L + D KT QE++Q Y Sbjct: 125 LEAVIGAIFLSGGIEAARRFIVDLFGDALAN-AQNLVSGDNKTAFQEWVQRTGPADIRYC 183 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 +V G HD+ F V+G + G G ++++AEQ AA +A++ Sbjct: 184 IVDESGPDHDKRFVAAVMVNG-TVIADGQGRTKKEAEQQAAGRAMR 228 >UniRef50_D1ALH0 Ribonuclease III n=7 Tax=Fusobacteriaceae RepID=D1ALH0_SEBTE Length = 231 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 77/232 (33%), Positives = 136/232 (58%), Gaps = 8/232 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 M+ + L K+GY F+ +LL++AL HRS +++H NERLEFLGD++L + Sbjct: 1 MDDSKLRELMEKIGYEFDDIKLLKEALIHRSYANEHGEIENINNERLEFLGDAVLDLIST 60 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 +Y + +EGD++++++ ++ + +++E LGE L L GE +GG R+SIL Sbjct: 61 EYIYTKEKDDNEGDLAKLKSRIISEPIFSAVSKEIALGEYLFLSNGEEITGGRDRKSILG 120 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EALIG +F+DS +++ L + + ++D I ++ KD KT LQE Q + +P Sbjct: 121 DAFEALIGAIFMDSGFDEAKRIALKYLKDKIDNIDDLEELKDYKTLLQELFQSKFHIIPN 180 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 Y ++ +G H+++F I ++ +GTG+S+++AE+ AA +A + Sbjct: 181 YEILSEKGPDHNKKFEIAVKLK-EEIVGIGTGTSKKEAEKNAAREAYFLFKK 231 >UniRef50_Q6ANV0 Ribonuclease 3 n=2 Tax=Desulfobulbaceae RepID=RNC_DESPS Length = 241 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 122/224 (54%), Gaps = 7/224 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRF 60 ++K+ Y F LLQ+AL H S + + +NERLEF+GD++L V+ NALY RF Sbjct: 17 AEFEKKINYKFIDLRLLQKALIHSSYAFEQAQAGKNNERLEFVGDAVLDLVVGNALYRRF 76 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P + EG+++R+RA LV LA +AR+ LG L LG GE S G + SIL+ EA+I Sbjct: 77 PEMREGELTRLRAALVNEGHLATMARKINLGYFLCLGKGEDNSKGREKSSILSCAYEAVI 136 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G +F D V L+ ++ +D D K+RLQE LQ +H P+Y + Sbjct: 137 GAIFQDGGYDAVAALVERFFLPVIDRRKEDLLLADAKSRLQEILQEKHNEGPSYRLDNEE 196 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G +H + FTI G S+++AEQ A A+KK+E Sbjct: 197 GPSHKKRFTISVLFRD-EVLGTGEAGSKKEAEQRGAALAIKKIE 239 >UniRef50_C4FT63 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT63_9FIRM Length = 247 Score = 237 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 80/219 (36%), Positives = 125/219 (57%), Gaps = 9/219 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYH 58 I ++++L TF EL+QQA H S +++ H ERLEFLGD++L + + LYH Sbjct: 7 IRVIEKQLNLTFKKPELIQQAFRHTSYANEQARRHLPHYERLEFLGDAVLELLSSEFLYH 66 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +P + EG ++RMRA +V+ +LA LAR+ + + L+LG GE SGG R+SILAD EA Sbjct: 67 SYPNLPEGKLTRMRAQIVQEKSLAYLARQLKFNQFLQLGKGEELSGGRERDSILADCFEA 126 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G ++ D ++ + + ++ + G +D KT QE +Q + Y + Sbjct: 127 VLGAIYEDQGLEVAKDYLNRVMFSQHQ-LLLGRVTQDHKTLFQERVQKQGTVQIDYRLKD 185 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 217 +G AHDQ FT+ V+ G GSS+++AE AAE Sbjct: 186 KQGPAHDQIFTVELYVND-QHIATGQGSSKKQAEMQAAE 223 >UniRef50_Q3ZXY9 Ribonuclease 3 n=5 Tax=Dehalococcoides RepID=RNC_DEHSC Length = 237 Score = 237 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 74/229 (32%), Positives = 121/229 (52%), Gaps = 8/229 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANAL 56 + + L+ LG F LL+QAL H S +++ NER+EFLGD++L + A+ L Sbjct: 2 LDLTELENSLGVKFEQPSLLEQALIHTSWVNENPNHSSGSNERMEFLGDAVLGVIFADRL 61 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 YH FP + EGD++R R+ LVR +L +A LG+ L LG GE S G + + LA Sbjct: 62 YHDFPDIQEGDLTRFRSLLVRRESLVRVALGINLGKYLYLGRGEDVSKGRFKPANLAGAF 121 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA++ +++D + ++I ++T ++ + D K+RLQE +Q + P Y + Sbjct: 122 EAVLAAIYIDKGMDVTREVIFRLFKTEMERVQTLSSNIDYKSRLQELIQAQLQLTPRYRI 181 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 G H++ F G+G S+++AE AA+ AL++ E Sbjct: 182 TNFSGPEHNRLFIAEVYAED-RVFAEGSGRSKKEAETNAAKVALQQFEN 229 >UniRef50_Q3SH50 Ribonuclease 3 n=11 Tax=Proteobacteria RepID=RNC_THIDA Length = 226 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 110/208 (52%), Positives = 139/208 (66%), Gaps = 1/208 (0%) Query: 1 MNPIVINR-LQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHR 59 MN +++ LQ+ LGYTF+ LLQQALTHRS + +NERLEFLGDS+L+ +A ALY Sbjct: 1 MNNALLDARLQQALGYTFSRSGLLQQALTHRSYGALNNERLEFLGDSVLNCSVARALYDA 60 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP + EG +SR+RA LVR TLAE+A LG+ LRLG GELKSGGFRR SILAD +E+L Sbjct: 61 FPDLPEGSLSRLRANLVRQETLAEIAGALRLGDSLRLGEGELKSGGFRRPSILADALESL 120 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 G VFLD+ ++++ + + +I P KDPKTRLQE LQ R LPLP Y +V Sbjct: 121 FGAVFLDAGFDEAQRVVRRLFDPLVAQIDPKASGKDPKTRLQEILQSRRLPLPEYRLVGT 180 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 GEAHDQ F + C ++ GTG S Sbjct: 181 EGEAHDQSFIVECLLAKPVLSTRGTGKS 208 >UniRef50_B9E1G8 Ribonuclease 3 n=35 Tax=Clostridium RepID=RNC_CLOK1 Length = 244 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 71/226 (31%), Positives = 132/226 (58%), Gaps = 6/226 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 +++ L +FN +EL+ ALTH S ++ NER+EFLGDS+L I+ L+ + Sbjct: 7 FEEVEKTLNISFNDKELIDTALTHSSYANGKKGVKFNERMEFLGDSVLQLCISEYLFLIY 66 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 EG++++ R+ +V N+L E+A+++ +G+ +++ GE +GG R SILA+ VEA+I Sbjct: 67 KSKSEGELTKKRSLIVCENSLYEVAKKWNIGKYIKMSKGEEITGGRERTSILANCVEAII 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 +++DS + ++ I++ ++ +++ D KT LQE +Q Y++++ Sbjct: 127 AAIYIDSGYKKTKQFIIDNFKDIIEKAIKNQIVLDYKTNLQEIVQQDGDIHIEYMLIKYE 186 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G H ++F V+ + G G +++++EQ AA+ ALKKL+ E Sbjct: 187 GPPHRRKFYTKVCVAN-NVMGSGVGYTKKESEQNAAQDALKKLKSE 231 >UniRef50_C7LRK0 Ribonuclease III n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRK0_DESBD Length = 242 Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 82/225 (36%), Positives = 124/225 (55%), Gaps = 5/225 (2%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHRF 60 + LQ ++ Y F +LL QALTH S +++H NERLEFLGD++L ++ L+ +F Sbjct: 9 ALQALQNEIHYEFKQVKLLIQALTHSSHANEHGCPHNERLEFLGDAVLELAVSQELFRKF 68 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P V EG +++MR+ LV LA+ AR LG CL LG GE GG + S+L+D +EA++ Sbjct: 69 PEVQEGHLTKMRSALVSEGALAQAARRIHLGACLLLGRGEDVQGGREKNSVLSDALEAVL 128 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G V+LD ++ + Y + + +D K+ LQE Q P+Y + + Sbjct: 129 GAVYLDGGLERAITCVNFLYAGQWPTPPETFRPRDFKSLLQEATQRIWKARPSYALRESH 188 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 G H +++T+ + +E S RKAEQ AAEQAL +L Sbjct: 189 GPEHAKQYTVVVTMPDKTEV-ECEERSMRKAEQGAAEQALVQLRK 232 >UniRef50_A8SP75 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SP75_9FIRM Length = 232 Score = 236 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 72/229 (31%), Positives = 127/229 (55%), Gaps = 12/229 (5%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALY 57 + L++K+GY F LL ALTH S +++ ERLEFLGD+IL Y+++ L+ Sbjct: 7 NYDELEKKIGYQFKDINLLITALTHTSFANELKVNKTDSYERLEFLGDAILEYIVSEYLF 66 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 + +EG ++++RA+LV TL++++ G+ +RL GE +GG +R+SIL D E Sbjct: 67 LKKKEYEEGRLTKLRASLVCEFTLSQISESLGYGDYVRLSKGEELTGGRKRKSILCDLFE 126 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 +++G ++LD I+ ++ + + D++ D K+ LQE+ Q L +Y ++ Sbjct: 127 SVLGAMYLDGGIEPAKEFVHRFLL---DDVETKSLFYDAKSTLQEFCQKHGRQL-SYELI 182 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + RG H + F ++G G G +R+ +EQ AA + L +L + Sbjct: 183 EERGPEHSKIFVSDAVING-KVTARGEGPNRKTSEQMAAYKTLLQLRKK 230 >UniRef50_Q39T82 Ribonuclease 3 n=5 Tax=Geobacter RepID=RNC_GEOMG Length = 246 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 92/228 (40%), Positives = 132/228 (57%), Gaps = 9/228 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANALYH 58 L+ +GY F +++ L +ALTHRS ++ NERLEFLGD++L ++ L+ Sbjct: 17 TELEAGIGYRFVNRQFLAEALTHRSWVNERRGEEGIRDNERLEFLGDAVLGLLVGKMLFA 76 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP+ EG ++RM+A+LV TLA LA LG L LG GE +SGG R S+LA+T EA Sbjct: 77 RFPQSREGVLARMKASLVGEETLAALASARGLGRHLLLGRGEERSGGRERRSLLANTYEA 136 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+ V+LD + VE+++ + L I+ G +D KT QE +Q R PTY ++ Sbjct: 137 LLAAVYLDGGLGPVERIVEQDFSPLLAGIASGATGRDFKTEFQEMVQTRFGTAPTYELIA 196 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD+ FT+ V+G G G S+++AEQAAA Q L + E Sbjct: 197 TDGPPHDRRFTVIAMVAGKR-MGEGAGRSKKEAEQAAARQVLARFAAE 243 >UniRef50_C8X2M7 Ribonuclease III n=4 Tax=Desulfovibrionales RepID=C8X2M7_DESRD Length = 237 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 86/233 (36%), Positives = 127/233 (54%), Gaps = 9/233 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIAN 54 M+ V+ +Q++L YTF Q+LL ALTH S +++H NERLEFLGD++L I+ Sbjct: 1 MDDSVLRLVQQRLQYTFRDQQLLLLALTHSSYANEHPHIQEHNERLEFLGDAVLELAISE 60 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY R+P EG ++ +R+ LV LA L R+ E+ L LG GE GG R++IL D Sbjct: 61 ELYLRYPEAPEGSLTSLRSKLVSEPALAALGRQLEIAPALFLGRGEESQGGRERDAILCD 120 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISP--GDKQKDPKTRLQEYLQGRHLPLP 172 +E++ G +FLDSD + IL Y + ++ +D K+RLQE Q P Sbjct: 121 VMESIFGAIFLDSDYDRAKTCILELYVDKWPSAPSLGHERLRDFKSRLQECTQQLFKDRP 180 Query: 173 TYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 Y +V G H + + + + S+ SS +KAEQ AA +AL+ L+ Sbjct: 181 VYHLVDSTGPEHAKVYHVRVDLPNGSQ-ASAADSSVKKAEQQAARKALESLQA 232 >UniRef50_Q9ZLH2 Ribonuclease 3 n=45 Tax=Epsilonproteobacteria RepID=RNC_HELPJ Length = 239 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 126/218 (57%), Gaps = 2/218 (0%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRVDEGD 67 L++ LGY+F + LL+QALTH+S +NERLEFLGD++L VI LYH+F + DEG Sbjct: 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGK 80 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS 127 +S++RA++V + +LA+ L + LR+ E S G + SIL+ EAL+ GV+L++ Sbjct: 81 LSKLRASIVSAHGFTKLAKAIALQDYLRVSSSEEISKGREKPSILSSAFEALMAGVYLEA 140 Query: 128 DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 + V K+I N + D KT LQE Q + +PTY ++Q +G H +E Sbjct: 141 GLAKVRKIIQNLLNRAYKRLDLEHLFMDYKTALQELTQAQFCVIPTYQLLQEKGPDHHKE 200 Query: 188 FTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 F + + G S+++AEQ A QAL+KL+ Sbjct: 201 FEMALYIQD-KMYATAKGKSKKEAEQQCAYQALQKLKE 237 >UniRef50_A6GP51 Ribonuclease III n=1 Tax=Limnobacter sp. MED105 RepID=A6GP51_9BURK Length = 226 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 128/213 (60%), Gaps = 1/213 (0%) Query: 15 YTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 Y+F Q LL+ ALTHRS SS HNERLEFLGDS+L+ + L+ P +DEG MSR+R+ Sbjct: 3 YSFKDQALLRLALTHRSYSSHHNERLEFLGDSVLNCAASILLFETHPDMDEGKMSRVRSH 62 Query: 75 LVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEK 134 LV+ + LA + R L + L LG GEL+S ++SI+AD +EAL G + LDS + Sbjct: 63 LVKQDCLAMVGRNLLLDQYLFLGAGELRSAKTIKDSIVADALEALFGAILLDSGFEAARD 122 Query: 135 LILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQV 194 ++ + + E KDPKTRLQE LQG+ + LP Y V+ G + EF++ C V Sbjct: 123 CVVRLLKPVMLETPIESMGKDPKTRLQELLQGKRMKLPMYRVLVEGGTSASPEFSVECAV 182 Query: 195 SGLSEPVVGTGSSRRKAEQAAAEQAL-KKLELE 226 L VG G SRR AEQ AA+ L + LE E Sbjct: 183 EDLEITKVGQGHSRRVAEQHAAQAVLIELLERE 215 >UniRef50_A1AWQ6 Ribonuclease III n=3 Tax=Gammaproteobacteria RepID=A1AWQ6_RUTMC Length = 221 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 106/220 (48%), Positives = 143/220 (65%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 + +LQ+K+ Y F LL+ ALTH S +NERLEFLGDSIL +I+ LY RFP +DE Sbjct: 1 MKKLQKKINYQFKDLSLLKLALTHCSMGKNNNERLEFLGDSILGVIISKELYQRFPNIDE 60 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G +SR+R+ LVR TL +L+ EL L LG GELKSGG+RRESI AD +EA+ G V L Sbjct: 61 GKLSRLRSHLVRDQTLTQLSAGLELSNSLILGFGELKSGGYRRESIQADAIEAIFGAVLL 120 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 DS+ +T ++L+ ++ L+ ISP D KDPKT+LQEYLQ LP Y + G+ H+ Sbjct: 121 DSNFETTSTVVLDLFEMLLNNISPDDSLKDPKTQLQEYLQKYGNVLPKYELTDTIGKDHN 180 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 FTI+C + + V + S +KAEQ+ A+ LKKL+ Sbjct: 181 AIFTINCLLKDQNLQVSQSAKSIKKAEQSCAQTLLKKLKE 220 >UniRef50_UPI00016BFC87 Ribonuclease III n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC87 Length = 239 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 8/224 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANAL 56 +V+ ++K+ YTF ELL ALTH S +++H NERLEFLGD+IL +++ L Sbjct: 9 VVLESFEKKIEYTFKRIELLDLALTHSSYANEHREQGVKDNERLEFLGDAILDLIVSEYL 68 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + ++P EGD+S+ RA++V +LA+ + ELG+ + LG GE GG RESI+AD Sbjct: 69 FKKYPESQEGDLSKFRASIVCEASLAKAGKRLELGKYILLGHGEEMGGGRDRESIIADAF 128 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+ G + +DS + V+ + + S KD KT LQ Q + Y V Sbjct: 129 EAVTGAMLIDSSYEDVKTYLAKTLIEFIKHTSATKLYKDYKTILQIESQKNVNTVIAYEV 188 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 V+ +G H++EF + + +G G+G ++R AEQ AA QAL Sbjct: 189 VEEKGPDHEKEFVVELKQNG-KVIGKGSGRTKRDAEQVAAHQAL 231 >UniRef50_C6XJG5 Ribonuclease III n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJG5_HIRBI Length = 255 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 81/227 (35%), Positives = 119/227 (52%), Gaps = 8/227 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANA 55 +N +Q G F LL +A TH SA NERLEFLGD +L V A+ Sbjct: 27 LNNDARATIQEIAGIKFKDVSLLDRAFTHTSAVPGEAADWSNERLEFLGDRVLGLVAASQ 86 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L RF + EG ++ LV +T A++A E LG+ L L E +GG + S+LA+ Sbjct: 87 LITRFEKEREGGLAPRLNALVSRDTCAKIAAEINLGQYLILDASESSAGGTTKPSLLANV 146 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EALIG ++LD+ + E+ I+ +++ + D +DPK+ LQE+ QG P P Y Sbjct: 147 TEALIGAIYLDAGLAASERFIVKYWKEYFK--TLTDVPRDPKSALQEWAQGDGRPAPNYE 204 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 + G H FT+ +V G+ P G GSS+++A++AAA L Sbjct: 205 NIDRTGPDHAPVFTVEVRVEGVR-PAKGEGSSKQEAQRAAASAMLNN 250 >UniRef50_C3Y2N8 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y2N8_BRAFL Length = 1490 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 11/229 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 + + + G F H LL +A THR+ HN+RLEFLGDS++ V + LY F Sbjct: 1199 LTEFESRCGMEFKHVRLLARAFTHRTVGFNNLTLGHNQRLEFLGDSVMQMVSSEYLYKHF 1258 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG +S +R++LV T A ++++ + E + + R+ LAD +EA + Sbjct: 1259 PDHHEGHLSLLRSSLVNNRTQALVSQDLGMEEYIISSDKARQGKLSLRQKTLADLMEAFM 1318 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 G +++D ++ V + + RL E + DPK++LQ+ +G+ +P Y Sbjct: 1319 GALYVDQGLEYVCVFMNVCFFPRLREFIMNQEWNDPKSQLQQCCLTLRTEGKEPDIPFYK 1378 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 ++ G +H +++T+ G G GSS ++AE AAA ALK + Sbjct: 1379 ILDKAGPSHARKYTVAVYFKG-ERIGTGVGSSIQQAEMAAARDALKNYK 1426 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ ++ LY FP ++EG ++ R +V+ LA LA++ L E + Sbjct: 1088 NHNERLEFLGDAVVEFLTSSHLYFMFPDLEEGGLATYRTAIVQNQHLAVLAKKLRLDEFM 1147 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWY---QTRLDEISPGD 151 G +A+ +EALIG +++ ++ +KL + + S Sbjct: 1148 LYAHGPDLCRESDLRHAMANCLEALIGAMYMQQGLEETKKLFCRLLFSDERLTEFESRCG 1207 Query: 152 KQKDPKTRL 160 + L Sbjct: 1208 MEFKHVRLL 1216 Score = 40.9 bits (95), Expect = 0.031, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA 32 +N L + LG F + LL+ ALTH S Sbjct: 1001 LNELDQLLGSKFEDRSLLELALTHPSH 1027 >UniRef50_C3RKG6 Ribonuclease III n=5 Tax=Bacteria RepID=C3RKG6_9MOLU Length = 226 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 76/226 (33%), Positives = 133/226 (58%), Gaps = 8/226 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALY 57 + + + +K+ + + E+ ++A TH S ++++ ERLEFLGD++L Y ++ ++ Sbjct: 1 MELEQFLQKMEIPYQNIEIFKEAFTHPSYANENKMKNHDYERLEFLGDAVLQYHVSRHIF 60 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +P + EG ++++RA LVR +LA ARE +LG + LG GEL +GG R+S+LAD E Sbjct: 61 DLYPELPEGRLTKLRAKLVREESLARFARELDLGPLIYLGAGELNNGGRDRDSVLADIFE 120 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A +G + D + VEK++ +++++ D+ D KT+LQE +Q TY ++ Sbjct: 121 AFMGAICHDCGPEYVEKMLDITIYKHVEDVN-YDEITDFKTKLQELIQADQRKTVTYDLI 179 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G +++ F + ++ VG GSS+++AEQ AA+ AL KL Sbjct: 180 SSSGPSNNPVFEMAVKM-DEMVLGVGVGSSKKRAEQQAAKDALNKL 224 >UniRef50_B8E199 Ribonuclease III n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E199_DICTD Length = 238 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 76/228 (33%), Positives = 129/228 (56%), Gaps = 11/228 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYH 58 ++ R++ K +FN ++LL +ALTH S ++ N+RLEFLGD++L+ +I L+ Sbjct: 14 IVERVKEKTRVSFNDKDLLIEALTHPSFKHENPNFKQDNQRLEFLGDAVLNMIITEILFQ 73 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 R+ EG +++ R LV+ TL + A+ +LGE + LG GE K GG + SIL+D EA Sbjct: 74 RYREASEGFLTQKRIYLVKEETLYKKAKSLDLGELILLGVGEEKQGGRDKISILSDLFEA 133 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 IG ++LD + + + ++ ++ I + + D K LQ YLQ P Y+V + Sbjct: 134 FIGALYLDKGYEYTKNFVEEIFKEEIESI---EMEVDWKNLLQTYLQKEGKK-PQYIVSR 189 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD+ F + + + G G ++R+AE AA++AL+K++ + Sbjct: 190 EVGPEHDKTFYVELWIDD-EKISEGEGKNKREAEIKAAQKALEKIKND 236 >UniRef50_B4RCU4 Ribonuclease 3 n=6 Tax=Caulobacteraceae RepID=RNC_PHEZH Length = 238 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 88/230 (38%), Positives = 126/230 (54%), Gaps = 9/230 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANAL 56 + L+R++GY F ++LL++ALTH S HNERLEFLGD +L+ A L Sbjct: 4 RAAAVAELERRIGYVFTDRDLLERALTHASVGDGARAVRHNERLEFLGDRVLNLCAAERL 63 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 P EG+MSR+ A+LV + A A+ L E LRL K G + +++L D Sbjct: 64 MALDPDAREGEMSRLLASLVNYHACARAAKRAGLQEALRLSASATKVGARKSDAVLGDAC 123 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EALI +++D ++T L ++ + + KDPKT+LQE++QG LPLPTY + Sbjct: 124 EALIAALYIDGGLETARAFFLKFWDEEFARLD-EPRAKDPKTQLQEWVQGMGLPLPTYEI 182 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 V G H FT+ QV+G G G SR+ AE+AAA+ L L+ E Sbjct: 183 VSQEGPPHAPSFTVEVQVAGFG-AERGEGRSRQAAEKAAAQCML--LKRE 229 >UniRef50_C8W741 Ribonuclease III n=3 Tax=Atopobium RepID=C8W741_ATOPD Length = 243 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 71/226 (31%), Positives = 121/226 (53%), Gaps = 7/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 + + G+TF +++L++ ALTH SA ERLEFLGDSIL +IA L+ R+ Sbjct: 7 VAAAEAICGHTFINKDLIEAALTHPSAVEGKPVSASYERLEFLGDSILGAIIATELFERY 66 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P +DEG ++R++ +LV G+TL+ ++ + + +G E +G +S L + E+++ Sbjct: 67 PDMDEGQLTRLKISLVSGHTLSIVSDTLGVSPLIVMGISEKGTGKRGMKSALENVYESIV 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD+ + ++ + + + PK+RLQE +Q + P Y ++ Sbjct: 127 GALYLDAGFEPTRDFVIRTLGPHISP-TLAVRSVSPKSRLQEAVQAQGKATPEYKLIGES 185 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G AH FT V GL G G S++ AE AA+ AL +L ++ Sbjct: 186 GPAHTPTFTAVVFVDGLKV-GRGQGPSKKAAESEAAQDALVRLGVD 230 >UniRef50_B1ZYU8 Ribonuclease III n=2 Tax=Opitutaceae RepID=B1ZYU8_OPITP Length = 250 Score = 233 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 87/232 (37%), Positives = 127/232 (54%), Gaps = 8/232 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANA 55 +P + LQ +L YTF LL++A+TH S ++ N+RLEFLGD++L ++ A Sbjct: 20 SPSPLAALQTRLIYTFRDPALLERAVTHTSYLPENPDIAESNQRLEFLGDAVLQLILTEA 79 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ FP EG +SR RA L +G L ELARE +L CL LG E SGG R S L D Sbjct: 80 LFELFPGDREGPLSRRRAALTKGAFLVELARELQLDRCLLLGSSEEASGGRTRSSALEDA 139 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGR-HLPLPTY 174 EAL+G ++LDSD+ +++L Y +S +++PK RLQE +Q Y Sbjct: 140 FEALVGALYLDSDLALTRRIVLGLYGDLPSRLSGVVNEENPKGRLQELIQPEYGNQALRY 199 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 V + GE H + + + + G G S++ AE+AAA AL+ L+ + Sbjct: 200 EVTGIEGEDHARAYEVAVFLHD-RVLGSGRGPSKKLAEEAAARVALETLKAQ 250 >UniRef50_B7JZ63 Ribonuclease III n=3 Tax=Cyanobacteria RepID=B7JZ63_CYAP8 Length = 225 Score = 232 bits (593), Expect = 5e-60, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 127/221 (57%), Gaps = 13/221 (5%) Query: 16 TFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 F +QELL ALTHRS ++H NERLEFLGD+IL +V++ LY R+P + E ++ Sbjct: 6 QFKNQELLDCALTHRSYINEHFEVTEHNERLEFLGDAILQFVVSEELYRRYPELTEAQLT 65 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 R+R+ LV LA+ AR +LG+ + LG G +K GG ++L+D EA+IG FLD+ I Sbjct: 66 RLRSKLVDEPQLAQFARTLDLGQLMYLGQGAIKDGGRENPALLSDAFEAIIGAYFLDAGI 125 Query: 130 QTVEKLILNWYQT------RLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 + V+ + + ++ + + D K RLQ++ ++ +P Y +++ G Sbjct: 126 EAVQYFVRSLFKEAIDNLVLPESRTVSPSIIDVKNRLQQWALEQYKQVPEYFLIEQSGPD 185 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 H +EF +++G G G +++A +AAA+ AL KL+ Sbjct: 186 HAKEFVFGVRING-QVLGTGKGRRKQEATKAAAQDALDKLQ 225 >UniRef50_UPI000174552F putative Ribonuclease III n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174552F Length = 238 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 7/211 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59 ++ L+ ++ Y F ELLQ+ALTH S + HN+RLE+LGD++L V++ A+YH+ Sbjct: 1 MDSLESRIAYQFKQPELLQEALTHPSLPYESKNPQRHNQRLEYLGDAVLQLVLSEAIYHQ 60 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP DEG ++++R LV+ TLA +AR+ LG L LG GE +GG RES LAD +E++ Sbjct: 61 FPLDDEGLLTKLRTRLVQTRTLAHIARQLCLGRDLLLGKGEESNGGRSRESTLADVMESI 120 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG V+LD I+ V +L + L + + +PK +LQE LQG PTY ++ Sbjct: 121 IGAVYLDGGIEAVRPFVLQHWSHDLAALQHSPVELNPKGQLQELLQGEGGNTPTYRIIAA 180 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 G H + F GTG S+++ Sbjct: 181 EGPDHQKVFQAVVVWQDRD-LAAGTGRSKKE 210 >UniRef50_D0STQ6 Ribonuclease III n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STQ6_ACILW Length = 232 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 116/222 (52%), Positives = 155/222 (69%), Gaps = 3/222 (1%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-NERLEFLGDSILSYVIANALYHRFPRVDE 65 RL +++GY F +LL+ ALTHRS S KH ERLEFLGDS+L +IAN L++ +P +E Sbjct: 11 ERLAKRIGYQFKQADLLKLALTHRSVSHKHNYERLEFLGDSLLGMIIANYLFNAYPSENE 70 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G ++RMRATLVR L ++A + +L + L L GELKSGG RESILADTVEA+IG +++ Sbjct: 71 GRLTRMRATLVRQEALGKIANDLKLSQNLILSTGELKSGGHHRESILADTVEAIIGAIYV 130 Query: 126 DSD-IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 D + +E ++L WY+ LD I P D+ KDPK+RLQEYLQ R PLP Y VV ++G+A Sbjct: 131 DCGDLTVLEPIVLKWYEPYLDHIEPTDQLKDPKSRLQEYLQARKKPLPVYEVVDIQGDAP 190 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 +Q F + CQ++GL + G G+SRR AEQA A LK LE + Sbjct: 191 NQHFKVECQIAGLP-TMQGEGASRRFAEQAVAADILKLLEHK 231 >UniRef50_C1Q9X5 Ribonuclease III n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q9X5_9SPIR Length = 246 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 138/234 (58%), Gaps = 11/234 (4%) Query: 1 MNPIVINRL----QRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSY 50 MN I I + Q + Y F ++ L +A+THR+ +++ N+RLEFLGDS+LS Sbjct: 1 MNIINIEEILNNCQEVIKYEFRNKSYLLEAITHRTYANESKKKMKYNQRLEFLGDSVLSL 60 Query: 51 VIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRES 110 +I++ L+ ++ EG +S+++++LV +LA++++E +LG+ + LG GE SGG R++ Sbjct: 61 IISDYLFKKYNTSKEGLLSKVKSSLVSQKSLADISKELKLGDFILLGHGEEVSGGRYRDN 120 Query: 111 ILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP 170 +L D EA++G ++LDS I + ++ Y+ RL+ + + KD KT QE +Q +H Sbjct: 121 MLEDLFEAIVGAIYLDSGINNAAQFVMKAYKNRLNNLDIENFDKDYKTIFQELIQKKHKT 180 Query: 171 LPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 P Y + E + + F V+ + G G S+++AE AA++AL+ +E Sbjct: 181 SPVYKSYEYHDENNHEMFKSEVYVNDKNF-SSGIGKSKKEAETEAAKKALENIE 233 >UniRef50_Q8CPI1 Ribonuclease 3 n=63 Tax=Staphylococcaceae RepID=RNC_STAES Length = 245 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 124/223 (55%), Gaps = 9/223 (4%) Query: 11 RKLGYTFNHQELLQQALTHRSASS-------KHNERLEFLGDSILSYVIANALYHRFPRV 63 + LG F + +L QQA +H S + +HNERLEFLGD++L ++ L+ R P + Sbjct: 22 KSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHL 81 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG++++MRAT+V +L A + +L E + LG GE K+GG R S+++D EA +G + Sbjct: 82 PEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGAL 141 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 +LD + +V +++ D KT+ QEY+ ++ TY +++ G A Sbjct: 142 YLDQGLDSVWTFAEKVIFPYVEDDELVG-VVDFKTQFQEYVHSQNKGDVTYQLIKEEGPA 200 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H + FT + + G G +++++EQ AAEQA K ++ + Sbjct: 201 HHRLFTSEVILENKAV-AEGKGKTKKESEQKAAEQAYKLMKNK 242 >UniRef50_Q5GTI3 Ribonuclease 3 n=17 Tax=Rickettsiales RepID=RNC_WOLTR Length = 243 Score = 232 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 10/224 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASS-------KHNERLEFLGDSILSYVIANALYHR 59 + + + + Y F + +L++ALTH S + ++ ERLEFLGDSIL+ +++ L+ Sbjct: 16 DTISKIINYRFKNDAILEEALTHPSLNKRNSKNQIENYERLEFLGDSILNMIVSAILFRL 75 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP+ EG ++R + LV GNT+A +A+E +LG + + E +GG R L + +EAL Sbjct: 76 FPKEKEGALARRKTDLVCGNTIANVAKEIKLGNFIIMNNSERCNGGKRNLKNLENALEAL 135 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG +++D V+K + ++ R + +DPKT LQE+ Q LPLP Y +++ Sbjct: 136 IGAIYIDGGFANVKKFVTKHWEERAKGMLS--LPQDPKTSLQEWTQKNKLPLPEYELMKQ 193 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G AH EFTI + + SS++ AEQ AAE L+K+ Sbjct: 194 TGPAHSPEFTISICIENYGKVF-ACASSKKVAEQKAAELMLEKI 236 >UniRef50_D1B4H0 Ribonuclease III n=5 Tax=Campylobacterales RepID=D1B4H0_SULD5 Length = 227 Score = 231 bits (591), Expect = 9e-60, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 128/222 (57%), Gaps = 2/222 (0%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRVD 64 + LQ++LGY F +Q L+ +ALTH+S+ +NERLEFLGD++L ++ LY F V Sbjct: 5 LEALQKRLGYQFKNQNLIIEALTHKSSKQPYNNERLEFLGDAVLDLIVGEYLYKEFLGVA 64 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG++S++RA+LV + +LAR LGE + + E + G + S+L++ EA+IG ++ Sbjct: 65 EGELSKLRASLVNEKSFEKLARLLHLGESIYISLAEENNNGREKPSLLSNAFEAIIGALY 124 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 L++ ++ L ++ + +I +D KT LQE Q P Y +V+ G H Sbjct: 125 LEAGLEKARTLAISLLEEAYPKIDMDAIFRDHKTTLQELTQAHFGVTPEYRLVRSFGPDH 184 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 +EF I V G + +G S+++A+Q AA AL+ L+ E Sbjct: 185 QKEFEIAVSVRGSD-LSLASGKSKKEAQQKAALLALEILKKE 225 >UniRef50_B3R1Z9 Ribonuclease 3 n=139 Tax=Bacteria RepID=RNC_CUPTR Length = 256 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 109/206 (52%), Positives = 142/206 (68%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRV 63 + ++ LQ++LGY F+ ELLQQALTHRS S++HNERLEFLGDS+L+ +A+ LY F ++ Sbjct: 1 MNLDALQQRLGYRFSKPELLQQALTHRSHSAQHNERLEFLGDSVLNCAVADMLYGMFGKL 60 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 DEGD+SR+RA LV+ L E+A+ +L + LRLG GELKSGGFRR SILAD +EA++G V Sbjct: 61 DEGDLSRVRANLVKQQALYEIAQMLQLSDTLRLGEGELKSGGFRRPSILADALEAIVGAV 120 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 FLD+ LI Y L+++ P KD KT LQEYLQG + LP Y V+ G A Sbjct: 121 FLDAGFDAARALIRKLYIPILEQVDPRTLGKDAKTLLQEYLQGHKIALPQYNVIATHGAA 180 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRR 209 H Q+F + C V L V GTG+SRR Sbjct: 181 HSQQFEVECTVPKLEVRVFGTGASRR 206 >UniRef50_B0K1V8 Ribonuclease III n=19 Tax=Clostridia RepID=B0K1V8_THEPX Length = 246 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 7/211 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 ++ L+ ++ Y+F + LL +ALTH S + + NERLEFLGDS+LS VI+ LY Sbjct: 19 NLSELEERINYSFKDKNLLIEALTHSSWAHEGKNSKISNERLEFLGDSVLSLVISEYLYK 78 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++EG +S+ RA +V +LA ARE ELG LR+G GE +GG R+SILAD +EA Sbjct: 79 NRKDLEEGSLSKYRAEIVCEPSLARCAREIELGNFLRIGKGEELTGGRERDSILADAMEA 138 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++ V+LD ++ V +IL ++ ++E+ G +D KT+LQE +Q + Y +++ Sbjct: 139 ILAAVYLDGGLEVVRNVILELFKNIIEEVLEGLIYRDYKTKLQEVVQSMEIGKIIYELIE 198 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G H++ F ++ + G G S++ Sbjct: 199 EMGPDHNKTFVTQVRIGDV-ILGKGYGKSKK 228 >UniRef50_B1C8X8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8X8_9FIRM Length = 227 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 85/227 (37%), Positives = 138/227 (60%), Gaps = 6/227 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYH 58 + I RL++KLGY F +EL++ ALTH S S+++ NERLEFLGD++L + LY Sbjct: 1 MEIERLEQKLGYEFKDKELIKVALTHSSKSNENKTLQNNERLEFLGDAVLDLCVGAYLYK 60 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P EG ++++RA +V ++L + + +LGE + LG GE+ SGG +++I+AD EA Sbjct: 61 TLPGKKEGVLTKLRALIVCADSLFSASDKLDLGEFIMLGKGEMHSGGKYKKNIIADCFEA 120 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G ++LDSD + V + L + + G+ D KT LQEY+ +++ +Y +VQ Sbjct: 121 VLGAIYLDSDYEKVSTIALTLLSDVIKKAISGNLTYDYKTLLQEYIHSKNIKDFSYELVQ 180 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 ++G HDQ FT ++ G G +++++EQ AA LKKL+L Sbjct: 181 IKGPEHDQIFTSKVIINNKD-MGQGEGKNKKESEQHAALNTLKKLKL 226 >UniRef50_D0LWB5 Ribonuclease III n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWB5_HALO1 Length = 282 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 82/219 (37%), Positives = 119/219 (54%), Gaps = 8/219 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANA 55 + I ++ L+ LG+ F + LL+ A+THRS +++ NERLEFLGD++L + + Sbjct: 41 HAIDLSGLEDILGHRFRKRALLEAAVTHRSFANEQAVPCTDNERLEFLGDAVLDLAVGHM 100 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L P + EG +S RA +V L+E+A LG LRLG GE +SGG + SILAD+ Sbjct: 101 LMDVHPDLSEGRLSVTRAQIVSEKGLSEIAYGLGLGTYLRLGKGERRSGGQNKASILADS 160 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EA+I V+LD KL+ + L+E+ D KTRLQE Q R P Y Sbjct: 161 LEAVIAAVYLDGGFDAAWKLVARLFARTLEEVEISG-FYDHKTRLQELAQARLKSTPAYR 219 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQA 214 VV G H + F + ++ G GSS+++AEQ Sbjct: 220 VVDETGPDHAKLFEVVAEIDGREW-GRAIGSSKKRAEQM 257 >UniRef50_Q027L3 Ribonuclease 3 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RNC_SOLUE Length = 271 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 82/233 (35%), Positives = 122/233 (52%), Gaps = 19/233 (8%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH------------NERLEFLGDSILSYVIANAL 56 L+ KL Y FN ELL++ALTH S ++++ NE+LEFLGDS+L ++IA AL Sbjct: 8 LELKLDYRFNDPELLRRALTHSSLANENRPGAGVGSPLNDNEQLEFLGDSVLGFLIAEAL 67 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 RFP EGD+SR++A LV L +AR +LG L LG E SGG ++++L D + Sbjct: 68 VRRFPEYHEGDLSRLKAHLVSAAHLHGVARRLDLGSYLELGRSEEMSGGRTKKTLLVDGL 127 Query: 117 EALIGGVFLDSDIQTVEKLI------LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP 170 EA++ ++LD + + ++ + K+ LQE Q R LP Sbjct: 128 EAIMAAIYLDGGVDAARAFVATHVLDAPFFGDEEAGTDIQPAITNFKSALQELAQTRRLP 187 Query: 171 LPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 P Y VV+ RG H + FT+ +V G G +++ A Q AA ++L Sbjct: 188 QPRYSVVRERGPEHSKTFTVEVRV-GKEWTAQAEGRTKKIAAQRAARGLYERL 239 >UniRef50_C8NEF3 Ribonuclease III n=2 Tax=Granulicatella RepID=C8NEF3_9LACT Length = 236 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 79/222 (35%), Positives = 127/222 (57%), Gaps = 9/222 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFP 61 L+ K +FN++ LL +A+TH S +++H NER+EFLGD++L I++ L+ +FP Sbjct: 11 LKEKFDISFNNEALLMEAMTHSSYANEHKEMKGIYNERIEFLGDAVLELTISDWLFRQFP 70 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG ++++RA +V ++L+ LA+E L E L LG GE SGG + +IL D EA IG Sbjct: 71 HFQEGQLTKLRAQIVCEDSLSLLAKECSLNEYLLLGKGETLSGGREKPAILCDVFEAFIG 130 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD + V++ + N + + D KT LQEYLQ Y +V+ G Sbjct: 131 ALYLDKGVNEVQRFL-NLVVIPKIKNGRYELITDFKTELQEYLQQNGPVHIRYELVKEEG 189 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 +HD+ FT+ V G +G +++ AEQ AA+ +++L Sbjct: 190 PSHDKTFTVQLIVDGKKYK-TASGKTKKAAEQMAAKLTMEEL 230 >UniRef50_B9XI61 Ribonuclease III n=1 Tax=bacterium Ellin514 RepID=B9XI61_9BACT Length = 231 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 115/212 (54%), Gaps = 7/212 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALY 57 +N LQ LGY F ELLQ ALTH S + + HN+RLEFLGD++L V+ + LY Sbjct: 2 PDLNNLQTALGYAFRKIELLQLALTHPSVAHEQRTPVQHNQRLEFLGDAVLQLVLTHELY 61 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +FP EG +++ RA LV LAE R LG L L GE GG R S LADT E Sbjct: 62 SKFPDFGEGPLTKARAKLVNRRALAEQGRALNLGAHLILSRGEEAHGGRLRPSALADTFE 121 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 AL+G +FLD + VEK +L + L EIS ++PK LQE LQ + P Y VV Sbjct: 122 ALLGAIFLDGGFEAVEKFLLARFHDMLAEISALPALENPKGELQELLQAKSSEAPQYNVV 181 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G HD+ F Q +G+ G G S++ Sbjct: 182 STSGPDHDRVFECIVQHNGVE-LAHGRGKSKK 212 >UniRef50_B1H0Q0 Ribonuclease III n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0Q0_UNCTG Length = 243 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 79/225 (35%), Positives = 130/225 (57%), Gaps = 11/225 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFP 61 + Q+ + Y F ++L ALTH+S +++ N R+EFLGDSILS ++A LY R+P Sbjct: 7 EKFQKIIEYKFGDPKILATALTHKSYAAETVGENYNRRMEFLGDSILSAIVAETLYLRYP 66 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 R EG +S+ +A ++ + L+ ARE +LG C+ LG E +RES+L D EA+IG Sbjct: 67 RESEGKLSQFKAQIISAHNLSSWAREMDLGGCIYLGKSEDTKEARQRESLLCDVFEAVIG 126 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD + +K +L + + + + D K+RLQE LQ + LP Y V++ G Sbjct: 127 AIYLDGGFENAKKFVLRFLNDQKEI-----EITDYKSRLQEILQSIYKELPEYKVIKESG 181 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H+++F + + G G+S+++A+Q AA+QA+K + E Sbjct: 182 PDHNKKFEVAVYIK-SELLGKGAGNSKKEAQQFAAKQAMKNIRAE 225 >UniRef50_Q0AYW0 Ribonuclease 3 n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RNC_SYNWW Length = 233 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 126/206 (61%), Gaps = 7/206 (3%) Query: 21 ELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 EL+ ALTH S + + +N+RLEFLGD++L+ V+A LY+ + R EG+++++RA + Sbjct: 23 ELITMALTHPSYAQEKNTVANNQRLEFLGDAVLNLVVAEYLYNHYGRKAEGELTKIRAKV 82 Query: 76 VRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKL 135 V + LA AR LG+ L LG GE SGG +R+SILAD VEA+IG ++LD ++TV++ Sbjct: 83 VCEDALAIFARNINLGQYLLLGRGEEMSGGRKRKSILADAVEAVIGAIYLDQGLETVQRF 142 Query: 136 ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVS 195 I+ + + E + GD D K++LQE +Q R +Y +++ G AH + F Sbjct: 143 IIRQLEELISETASGDYY-DYKSKLQELVQARDKENVSYAIIEESGPAHAKVFVAGVYYR 201 Query: 196 GLSEPVVGTGSSRRKAEQAAAEQALK 221 G G S+++AEQ AA++ L+ Sbjct: 202 -EQLLATGEGKSKKEAEQKAAQKVLQ 226 >UniRef50_D1VB32 Ribonuclease III n=1 Tax=Frankia sp. EuI1c RepID=D1VB32_9ACTO Length = 319 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 124/213 (58%), Gaps = 10/213 (4%) Query: 20 QELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRAT 74 +LL +ALTHRS + ++ NERLEFLGD++L V+ +ALY+R P + EG +++ RA+ Sbjct: 43 PDLLDRALTHRSYAYENGGLPTNERLEFLGDAVLQLVVTDALYNRHPDLPEGALAKQRAS 102 Query: 75 LVRGNTLAELAREF---ELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 +V LA++AR +G L LG GE +GG + SILADT+EALIG V+L+ ++ Sbjct: 103 VVNSRALADVARVIGPKGIGPYLLLGKGEETTGGRDKASILADTLEALIGAVYLELGLEV 162 Query: 132 VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 +L+ ++ LDE + D KT LQE + P Y+V G H + FT Sbjct: 163 AAQLVHRYFDPLLDEAAGRGAGLDWKTSLQERTAELGMGPPDYVVTD-SGPDHAKRFTAR 221 Query: 192 CQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 ++S G G S+++AEQ AAE+A LE Sbjct: 222 ARISD-RIYGEGEGGSKKEAEQRAAERAFLALE 253 >UniRef50_Q1JXG8 Ribonuclease III n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXG8_DESAC Length = 244 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 118/209 (56%), Gaps = 9/209 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYH 58 +++ + +LGY F + LQ AL H+S +++ NER EFLGD++L V+A+ L+ Sbjct: 13 LSQFEERLGYRFTDRHYLQTALIHKSYANEQLRDPAACNERQEFLGDAVLDLVMADYLFC 72 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +P++ EG++SR+R+ LV LA++AR LG CL+LG GE +SGG ++++LAD +EA Sbjct: 73 TYPQLPEGELSRIRSELVSARALAKVARRLNLGPCLKLGRGERRSGGQDKDNLLADALEA 132 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 + G VFLD+ ++ ++ + + D KTR QE Q R P Y +V Sbjct: 133 VFGAVFLDAGWDVARDVLGRMFEGTAVQAARRKS-LDYKTRFQELAQARFGAAPEYELVA 191 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 G H +E+T+ G G+G S Sbjct: 192 TEGPDHQREYTVIVSCEG-RHLGQGSGGS 219 >UniRef50_Q7UGZ7 Ribonuclease 3 n=1 Tax=Rhodopirellula baltica RepID=RNC_RHOBA Length = 266 Score = 230 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 5/221 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPR 62 I R Q LGY F +LL+ ALTH S +S NERLEFLGDS+L + L++ +P Sbjct: 34 IERCQEILGYDFRDLDLLRSALTHASGASHRLASNERLEFLGDSVLGLTVCEWLFNEYPE 93 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EGD++++++ +V + ++A + L +CL +G G ++ + + S+++D EA+I Sbjct: 94 YSEGDLTKIKSAVVSRRSCGKVACKLGLDQCLIVGRGVTRNRSYPK-SLVSDVFEAVIAA 152 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +++D + V + W ++ + K+ LQ++ Q P Y +++ G Sbjct: 153 LYIDGGPEIVRDRLKLWLAEEVNLAVDTQGSGNHKSVLQQFAQRELSATPVYKLIRETGP 212 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H + F + V G++++ AEQ AA AL +L Sbjct: 213 DHRKMFLMGAMVDDRRF-APAWGNNKKDAEQRAAANALAEL 252 >UniRef50_C5QRI2 Ribonuclease III n=2 Tax=Staphylococcus RepID=C5QRI2_STAEP Length = 248 Score = 230 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 9/219 (4%) Query: 14 GYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRVDEG 66 G++FN+ +L QQA +H S + HNERLEFLGD++L ++ L+ + P + EG Sbjct: 25 GFSFNNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPHLPEG 84 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++++MRAT+V +L A + +L E + LG GE K+GG R S+++D EA +G ++LD Sbjct: 85 NLTKMRATIVCEPSLVIFANKIDLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLD 144 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 ++TV +++ D KT+ QE++ ++ TY +++ G AH + Sbjct: 145 QGLETVWAFAEKVIFPYVEDNELVG-VVDFKTQFQEFVHRQNKGDVTYRLIKEEGPAHHR 203 Query: 187 EFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 FT + + G G +++++EQ AAEQA K ++ Sbjct: 204 LFTSEVILENKAV-AEGKGKTKKESEQKAAEQAYKSMKK 241 >UniRef50_C5CSF5 Ribonuclease 3 n=6 Tax=Burkholderiales RepID=RNC_VARPS Length = 228 Score = 229 bits (585), Expect = 4e-59, Method: Composition-based stats. Identities = 105/220 (47%), Positives = 135/220 (61%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDE 65 + LQ +L ++F+ LLQ ALTHRS S+ HNERLEFLGDS+L+ +++ LY R + E Sbjct: 5 LTALQERLKHSFSDTRLLQLALTHRSFSADHNERLEFLGDSVLNLAVSHLLYTRLSALPE 64 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 GD+SR+RA LV+ +TL LA E +L LRLG GE +SGG R SILAD +EALIG V+L Sbjct: 65 GDLSRVRANLVKQDTLHRLALELQLSPLLRLGEGEARSGGPNRPSILADALEALIGAVYL 124 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D+ E L+ Y++ KDPKT LQE+LQG + LP Y V G AH Sbjct: 125 DAGFSAAEALVRRLYESVEINPRMDAVAKDPKTELQEWLQGHKMKLPVYRVAATLGAAHK 184 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 Q F + C+V L G G SRR EQAAA L +L+ Sbjct: 185 QTFDVECEVPELGLRERGIGGSRRAGEQAAAAAMLIRLKA 224 >UniRef50_C1ZAX4 RNAse III n=2 Tax=Planctomycetaceae RepID=C1ZAX4_PLALI Length = 263 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 123/226 (54%), Gaps = 5/226 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALYHRF 60 + + + +LGY F ELL QAL+H SA+ + NERLEFLGD+IL + + L+ ++ Sbjct: 8 VPLTECEARLGYHFRSPELLMQALSHASAAKTRLESNERLEFLGDAILGAAVCDLLFRKY 67 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P+ EG+++R+++ +V + LA+E L + + +G G + SIL+ T E++I Sbjct: 68 PKSTEGELTRIKSFVVSRHVCGLLAKELHLDQFVIIGKGLCGT-PNVPVSILSATFESVI 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 VFLD ++ I+ + ++++ + ++ K+ LQ+Y Q P Y +++ Sbjct: 127 AAVFLDGGFDAAKEFIIRLIEPHVEQMVGAEYGRNYKSVLQQYAQKTLGETPRYDLLKEY 186 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G H + F + + G G ++++AEQ AA AL +LE + Sbjct: 187 GPDHLKYFKVSAAL-GEVVYAAAWGINKKEAEQKAAANALSELEGK 231 >UniRef50_Q2W513 DsRNA-specific ribonuclease n=2 Tax=Magnetospirillum RepID=Q2W513_MAGSA Length = 228 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 91/225 (40%), Positives = 121/225 (53%), Gaps = 10/225 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANALYHR 59 L LG+ F ELL QALTH S +S ERLEFLGD +L V+A L+ R Sbjct: 6 AELSALLGHAFARPELLAQALTHPSMHQGRKSRTSDPYERLEFLGDRVLGLVVAEMLFSR 65 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EG ++R A LVR +A +A E LG CL L GE +GG ILAD EA+ Sbjct: 66 FPNEAEGALARRHAALVRREAVARIATEIGLGRCLVLAKGEDDAGGRANPGILADACEAV 125 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG ++ D+ + + ++ ++E KD KT LQE+ QGR PLP Y V+ Sbjct: 126 IGALYADAGFAVAASFVRSRWEPMMEEALA--PPKDAKTGLQEWAQGRGKPLPHYQVLGQ 183 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H+ F I V G+ VG G+S+R AEQAAA L++++ Sbjct: 184 EGPPHEPIFLIEVSVEGVG-SAVGRGASKRVAEQAAAGLLLEQVK 227 >UniRef50_Q0BTG2 Ribonuclease III n=12 Tax=Rhodospirillales RepID=Q0BTG2_GRABC Length = 258 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 121/235 (51%), Gaps = 18/235 (7%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASS--------------KHNERLEFLGDSILSYV 51 + + L + F ++LL +ALTHRSA NERLEF+GD +L V Sbjct: 19 LEAAEALLSHRFARRDLLAEALTHRSAVKIMHGQTGQSLPRGAGSNERLEFVGDRVLGLV 78 Query: 52 IANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESI 111 +A L RFP EG++ R A LV LA +A + L + L + PGE K+G + ++ Sbjct: 79 VAEWLVERFPLEQEGELGRRLAHLVSQPVLAGIAEQSGLPQILSVAPGEAKAGVRKLATV 138 Query: 112 LADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL 171 L+D +EALIG ++LD+ + V + I ++ + + + KD KT LQE+ QG L L Sbjct: 139 LSDAMEALIGALYLDAGLDPVRQFIRRHWEPVMQRQT--EPPKDAKTALQEWAQGLGLHL 196 Query: 172 PTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 PTY + + G H+ F + V G S+R AEQ AA+ L ++ + Sbjct: 197 PTYRLARREGPPHNPVFWVEVLVGDH--VGQGQAGSKRAAEQLAAQDLLGRIRDK 249 >UniRef50_A1APX0 Ribonuclease III n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1APX0_PELPD Length = 234 Score = 228 bits (583), Expect = 7e-59, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 114/212 (53%), Gaps = 6/212 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYH 58 + L+R++ Y F Q L QALTH S + + +RLEFLGD++L V+A L+ Sbjct: 3 SDLAELEREIAYRFIDQAPLLQALTHPSFEHEQAGGGNYQRLEFLGDAVLGMVLAEMLFR 62 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP +EG +SR+R+ + +TLA +AR F LG +RLG GE + G ++SILAD +EA Sbjct: 63 RFPDSNEGVLSRLRSQIADQDTLAGIARSFGLGRFVRLGRGEEQGAGRNKDSILADVLEA 122 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LI V+LD ++ +LI + L+ + D K+ LQE L R LP P Y + Sbjct: 123 LIAAVYLDGGLKESRRLIQRLFVAILESRGARLRFNDAKSELQELLSARRLPSPVYRLTG 182 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 G HD+ F V G G S++ Sbjct: 183 ESGPPHDRLFIFQVLVDDA-VVGEGEGRSKKI 213 >UniRef50_Q6MEK1 Ribonuclease 3 n=2 Tax=Parachlamydiaceae RepID=RNC_PARUW Length = 242 Score = 228 bits (583), Expect = 8e-59, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 8/209 (3%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFP 61 ++ KLGYTF +LL A HRS ++ HNERLEFLGDS+L +I++ LY + P Sbjct: 20 AIEAKLGYTFKDPQLLVLAFVHRSFINENREVNQHNERLEFLGDSVLGMLISDYLYCKLP 79 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG +S +R+ LV ++ + +L L LG GE + G RESILAD EA+IG Sbjct: 80 KTPEGQLSYLRSRLVEASSCVHYIQSLDLSGYLLLGKGERMNDGRGRESILADLFEAIIG 139 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD +Q + + + ++ I ++ K LQ+Y Q + P Y V+ G Sbjct: 140 AIYLDGGLQAAKDFLFKNFHQHIE-IILATPLRNWKALLQDYCQKNYQQTPLYQVLHESG 198 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 H + F I + E G G+S+++ Sbjct: 199 PDHSKVFQISVWIQD-RELGRGKGTSKKE 226 >UniRef50_A8TKF3 SsrA-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKF3_9PROT Length = 227 Score = 228 bits (583), Expect = 8e-59, Method: Composition-based stats. Identities = 89/222 (40%), Positives = 131/222 (59%), Gaps = 6/222 (2%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSA---SSKHNERLEFLGDSILSYVIANALYHRFP 61 ++ L LG+TFNH ++L++A+TH SA + ERLEFLGD +L+ +A L RFP Sbjct: 7 DLSHLAEVLGHTFNHPDILRRAVTHASAEPRAWNAYERLEFLGDRVLALAVAEQLLDRFP 66 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG +++ +LVR TLA++A +LG L + GE +G ++IL+D++EA+I Sbjct: 67 HEREGAIAKRHVSLVRRETLADVAHTIDLGRYLIVSRGEDDAGARASDTILSDSMEAVIA 126 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++LD + +K IL + L+ +DPKT LQE+ QGR LPLP Y V+ G Sbjct: 127 ALYLDGGLAAAQKFILKHWNPLLEM--DHRPPQDPKTGLQEWAQGRRLPLPVYTTVEQTG 184 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 AH EFT+ V GL+ P +G S+R AEQ AA L+ + Sbjct: 185 PAHAPEFTVEVVVEGLA-PQRASGKSKRLAEQLAAAAMLEAI 225 >UniRef50_D1CFY1 Ribonuclease III n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFY1_THET1 Length = 234 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 88/224 (39%), Positives = 126/224 (56%), Gaps = 10/224 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYHRFPR 62 LQ +LGY F + ELL+ ALTHRS +++ NER EFLGDSIL++V+ AL+ FPR Sbjct: 10 LQERLGYKFRNIELLKTALTHRSFANESLEKTETNERFEFLGDSILAFVVGEALFRLFPR 69 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 EG ++R RA LV LA+++R +G+ + LG G SG + ES+LAD +EALI Sbjct: 70 ASEGILTRARAHLVGRKNLADISRTLGIGDFILLGKGARLSGSSQSESVLADALEALIAA 129 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 V+LDSD++T ++ + +EI KD KTRLQE + P Y V+ Sbjct: 130 VYLDSDLETCRSVVFRLLRLSKEEIEHWLDVKDNKTRLQELSHRLYRTNPIYTVIAA--P 187 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 F + +V+ G G S+ +AEQ AA +AL + + Sbjct: 188 PVRDNFIVQVKVND--VSAQGEGRSKSEAEQEAARKALDVFDFK 229 >UniRef50_B6WR93 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR93_9DELT Length = 243 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 88/232 (37%), Positives = 131/232 (56%), Gaps = 8/232 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIAN 54 ++ + R++R L Y F+ E + ALTH S +++H NERLEFLGD++L I+ Sbjct: 11 ISAADLERIERILDYHFSRPERVALALTHSSWANEHGLGQAHNERLEFLGDAVLELCISW 70 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 L+ RFP+ EGDM+R+R+ LV +LA+ ARE + + LRLG GE + GG R+++L+D Sbjct: 71 ELFTRFPQAREGDMTRVRSQLVGTTSLAQRARETGIDQLLRLGRGEEQQGGRSRDAVLSD 130 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPG-DKQKDPKTRLQEYLQGRHLPLPT 173 EA++ V+ D +K++ + T LDE+S G K KD KT LQE P Sbjct: 131 VFEAVLASVYEDGGYAAAQKVVARIFGTLLDEVSVGKPKTKDFKTSLQERSVALFHDRPV 190 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 Y + G H + FT+ + + +GSS +KAEQ AA AL L+ Sbjct: 191 YTTLACEGPEHARHFTVQVSLPSGQQ-FTASGSSCKKAEQEAARLALCALDA 241 >UniRef50_O69161 Ribonuclease 3 n=2 Tax=Alphaproteobacteria RepID=RNC_BRAJA Length = 250 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 9/222 (4%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASS------KHNERLEFLGDSILSYVIANALYHRF 60 L+ ++G++F LL Q +TH SA +RLEFLGD +L V+++ LYH F Sbjct: 23 AALEARIGHSFADPNLLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAF 82 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P DEG++S+ A LVR + A++A+ L + ++LG + R+S+L D EA+I Sbjct: 83 PNADEGELSKRLAELVRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVI 142 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G +FLD + + + R+ + P +DPKT LQE+ QG+ LP P Y V+ Sbjct: 143 GAIFLDGGHAAAAEFVKRNWTERMHK--PRRPLRDPKTVLQEWAQGKGLPTPVYREVERT 200 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G HD +F + + GL+ P G G S+R AE+ AA +++ Sbjct: 201 GPHHDPQFRVAVDLPGLA-PAEGIGGSKRAAEKVAASVMIER 241 >UniRef50_C5SLX4 Ribonuclease III n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SLX4_9CAUL Length = 242 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 86/219 (39%), Positives = 118/219 (53%), Gaps = 10/219 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIANALY 57 ++ L+ KLGY F ++LL ALTH S S NERLEFLGD +L ++A AL Sbjct: 16 LDELEAKLGYRFADRQLLDSALTHASVSDGRPKKTVSSDNERLEFLGDRVLGLLVAEALM 75 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 FP+ EG+MS+ LV T A +A +G +RL PGE KSGG +IL D E Sbjct: 76 QAFPQAAEGEMSQRLHGLVSRETCAAVAMSLGVGAAMRLAPGETKSGGRSNLTILGDACE 135 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 ALI V+LD +T ++ +Q S +PK+ LQE+ + LP P Y +V Sbjct: 136 ALIAAVYLDGGFETARRIFGPLWQP-HIRASHSRSHLNPKSHLQEWAAQKKLPSPKYEIV 194 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAA 216 + G H F + + G PVV +G SR++AE+AAA Sbjct: 195 ERSGPDHAPIFKVALTLEGYD-PVVASGKSRQEAEKAAA 232 >UniRef50_D1N9T0 Ribonuclease III n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9T0_9BACT Length = 232 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 120/227 (52%), Gaps = 7/227 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKHN-----ERLEFLGDSILSYVIANALYHR 59 I L+++LG+ L +A+THRS + ++N +RLEFLGD++L ++ L+H Sbjct: 4 NIEELKKRLGFAGPWSNRLAEAVTHRSYAVENNLGYDNQRLEFLGDAVLEIILTEYLFHL 63 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P EG+M+++R+ LVR LA LAR FELGE L G GE SGG R+S LAD EA+ Sbjct: 64 YPDAAEGEMTKIRSALVREPALARLARRFELGEYLLTGRGEHDSGGADRDSTLADLFEAV 123 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 +G +LD+ + + + + +PK +LQEY Q P Y ++ Sbjct: 124 LGAFYLDAGFDATRQFVTGLIRDEYPDPRSLLTSINPKGQLQEYSQRHWGLTPKYSILHT 183 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G H + + ++S VG ++R+ AE AA Q + L + Sbjct: 184 SGPEHLPVYEVEVRLS--RYNAVGRAANRKAAEGDAARQLYRYLSNK 228 >UniRef50_B2S448 Ribonuclease 3 n=2 Tax=Treponema pallidum RepID=RNC_TREPS Length = 254 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 84/226 (37%), Positives = 118/226 (52%), Gaps = 9/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS--------ASSKHNERLEFLGDSILSYVIANALY 57 + RLQ LG F L QAL+HRS +HNER+EFLGD++L V A LY Sbjct: 24 LRRLQETLGVKFRDPTALDQALSHRSLFSSKEDHCGVRHNERMEFLGDAVLGAVAAACLY 83 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 P EGD+++ +A LV +TL+++A + L LG GE SGG +++ILAD E Sbjct: 84 RALPDSHEGDLAKTKAVLVSTDTLSDIALSLRIDHYLLLGKGEELSGGRHKKAILADATE 143 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+IG +FLDS + E+ +L R+ I + D K+ LQ R+ P Y VV Sbjct: 144 AVIGALFLDSGFKAAERFVLRLLLPRVRPIREKNLHHDYKSTLQVLAHQRYRSKPEYTVV 203 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + G H F + V G G+S++ AEQ AA A ++L Sbjct: 204 KRTGPDHSVRFWVDVTVGDARF-GPGYGTSKKSAEQCAARLAWEQL 248 >UniRef50_A6C1C3 Ribonuclease III n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1C3_9PLAN Length = 247 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 79/233 (33%), Positives = 126/233 (54%), Gaps = 9/233 (3%) Query: 1 MNPIVINRL----QRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIA 53 ++P+ I++L Q+ LGY F ELL+ LTH SA+ NERLEFLGD+IL ++ Sbjct: 5 LSPVEIDQLLEECQQNLGYRFVDCELLKSCLTHTSAAKTRMDSNERLEFLGDAILGSIVC 64 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 L+ +FP EG+++R+++ +V NT LARE L + +G G + ES+LA Sbjct: 65 EKLFDQFPNAPEGELTRIKSAVVSRNTCTRLAREKGLDRFIFVGKGLAMTENL-PESLLA 123 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 EALI G++LD I V + + + + S + K+ LQ+Y Q + P Sbjct: 124 GMFEALIAGIYLDGGIAPVHQFLDPLIERENSKASRSVHGYNYKSLLQQYSQKKFSQTPI 183 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y V+ +G H + F + + G + GS++++AEQ AA AL++ E + Sbjct: 184 YEVLDEKGPDHSKFFKVTAII-GEHKYEPAWGSTKKEAEQRAAYNALRENEDD 235 >UniRef50_D1BLX9 Ribonuclease III n=3 Tax=Veillonella RepID=D1BLX9_VEIPT Length = 246 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 78/225 (34%), Positives = 130/225 (57%), Gaps = 8/225 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 ++ L +L + ++ A TH S +++H N+RLEFLGD++L +I L+ Sbjct: 19 LHELVARLDIPVSDISIIDCAFTHTSYANEHKSKHIHHNQRLEFLGDAVLDLIIGEYLFK 78 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +P + EG++++++A V ++LA ++R +LG+ L LG GE SGG R SILADT E+ Sbjct: 79 TYPDMAEGNLTKIKAATVCEDSLASVSRSLQLGQYLLLGHGERASGGNDRNSILADTFES 138 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LIG +++ +D QT +L T + + G + KD KT LQEY+Q Y ++ Sbjct: 139 LIGAIYISTDYQTAMAFVLKHLTTYIMQALEGKRGKDYKTLLQEYVQRDGDKHIVYHLLS 198 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F + +++G++ G+G S++ AEQ AA+ L+KL Sbjct: 199 ESGPDHAKTFHMEVEINGVTYEA-GSGKSKKIAEQHAAQLTLEKL 242 >UniRef50_A5IN74 Ribonuclease 3 n=8 Tax=Thermotogaceae RepID=RNC_THEP1 Length = 240 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 79/229 (34%), Positives = 130/229 (56%), Gaps = 11/229 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK----------HNERLEFLGDSILSYVIAN 54 ++ Q+K G F ++ELL +AL H S +++ NE+LEFLGD++L + Sbjct: 8 IVEEFQKKTGINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVCE 67 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY ++P + GD++R ++ LA ++RE LG+ L LG GE K+GG R+SILAD Sbjct: 68 ILYKKYPEAEVGDLARAKSAAASEEVLAMVSRELNLGKFLFLGKGEEKTGGRDRDSILAD 127 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTY 174 EAL+ ++LD +++L ++ +++I G+ D KT LQE +Q H P Y Sbjct: 128 AFEALLAAIYLDQGYHKIKELFEEEFELYIEKIMRGEMLFDYKTALQEIVQSEHKVPPEY 187 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 ++V+ D+ F + +V G S +G G ++++AE+ AA A +KL Sbjct: 188 VLVRTEKNDGDRIFVVEVRVDGKSI-AMGRGRTKKEAEKEAARIAYEKL 235 >UniRef50_Q2GIW0 Ribonuclease 3 n=17 Tax=Anaplasmataceae RepID=RNC_ANAPZ Length = 236 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 123/219 (56%), Gaps = 6/219 (2%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPRV 63 ++ + GY F ELL+ A+TH S +++ ERLEFLGD++L V++ LY FP Sbjct: 14 EKVFKISGYRFQDHELLKTAVTHPSIAAERYASYERLEFLGDAVLGLVVSEMLYTLFPDD 73 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG +++ R LVRG+ + E+A+ LG L + GEL SGG S L + +EALIG + Sbjct: 74 SEGLLTKKRIALVRGSKVVEIAQSLNLGNILLMSKGELTSGGISNNSNLENALEALIGAI 133 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 ++D +++V IL ++ ++ +D KT LQE+ QG + +P+Y ++ G Sbjct: 134 YVDGGLESVRHFILQHWKPLATNLA-DTPLQDAKTALQEWAQGHNFAIPSYRLINKSGLE 192 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 H FT+ V+G TG ++ AE AAA+ L+K Sbjct: 193 HAPVFTVEVTVNGQRV--HATGCKKKYAEIAAAKLMLEK 229 >UniRef50_Q0F3I4 Ribonuclease III n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3I4_9PROT Length = 229 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 94/225 (41%), Positives = 132/225 (58%), Gaps = 7/225 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTH----RSASSKHNERLEFLGDSILSYVIANALYHRFP 61 + +LQ+ +GY FN+ LL++ALTH RSA S ERLEFLGD++L V+A L+ FP Sbjct: 8 LQQLQQVIGYRFNNPALLKRALTHCSALRSAVSGDLERLEFLGDAVLGLVVAEYLHQSFP 67 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG +SRMRA LV ++L +A ++ L CL +G GE G + SI+A+ VEA+IG Sbjct: 68 EEPEGQLSRMRANLVCRDSLLVVASDWRLSACLIVGDGERGEYGIKSPSIVANAVEAVIG 127 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 VF +S +++L ++ LD+I D +D K+RLQE QG+ LP Y++V RG Sbjct: 128 AVFEESGWDASRRVVLTAWRPMLDDIGRVD-PRDAKSRLQELTQGKGWGLPEYVLVD-RG 185 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + F C V G+G ++ AE AAAEQA KL E Sbjct: 186 VGYQPRFEATCSVQ-EKVVGHGSGERKKLAEIAAAEQAWSKLTDE 229 >UniRef50_Q2S2W4 Ribonuclease III n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2W4_SALRD Length = 248 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 8/230 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSA-------SSKHNERLEFLGDSILSYVIANAL 56 + +++ +G + ++ALTHRS + + NERLEFLGD++L + L Sbjct: 16 VDPAAIEQLVGRPVDDLSHYRRALTHRSLLRVHPARTFRSNERLEFLGDALLDVFVGEVL 75 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 Y RFP DEG ++R+RA LV LA AR LG L + + G SILAD Sbjct: 76 YDRFPEKDEGALTRLRARLVSERPLATYARGLGLGPHLLMSENAAEGDGRDNPSILADAF 135 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA +G V+LD + + + +D + + K++L E+LQ P PTY V Sbjct: 136 EAFVGAVYLDLGHEAARGFVQDRVLAPVDLEDVATRDDNYKSQLLEHLQALGRPQPTYHV 195 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 V+ +G +HD+ FT+ +V + GT S++ AEQ AA + L ++ + Sbjct: 196 VEEKGPSHDKTFTVEVRVGDAAYE-RGTAGSKQDAEQQAARRTLDEMASD 244 >UniRef50_A4VIX5 Ribonuclease III n=2 Tax=Proteobacteria RepID=A4VIX5_PSEU5 Length = 208 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 104/190 (54%), Positives = 137/190 (72%) Query: 24 QQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAE 83 ALTHRS + ++NERLEFLGD+IL++V AL++ FP+ EG +SR+RA LV+G TLA Sbjct: 2 LLALTHRSYAGRNNERLEFLGDAILNFVAGEALFNHFPQAREGQLSRLRARLVKGETLAV 61 Query: 84 LAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTR 143 LAR FELG+ LRLG GELKSGG+RRESILADT+EALIG ++LD+ + + ++ W Sbjct: 62 LARGFELGDHLRLGSGELKSGGYRRESILADTLEALIGAIYLDAGMDVARERVIAWLANE 121 Query: 144 LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVG 203 L ++ D KDPKTRLQE+LQ R LP Y VV ++GE H + F + CQV+ L++ G Sbjct: 122 LQGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQGEPHCRTFFVECQVALLNDKTHG 181 Query: 204 TGSSRRKAEQ 213 G+SRR AEQ Sbjct: 182 QGASRRIAEQ 191 >UniRef50_C8PUU2 Ribonuclease III n=4 Tax=Gammaproteobacteria RepID=C8PUU2_9GAMM Length = 275 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 99/232 (42%), Positives = 136/232 (58%), Gaps = 14/232 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-NERLEFLGDSILSYVIANALYHRFPRVD 64 + L ++GY F++ L AL HRS S+H ERLEFLGD++L +IA AL+ R+P + Sbjct: 36 LTALFYQMGYQFDNVNLPIMALMHRSFDSEHNYERLEFLGDALLGVIIAEALFLRYPDYN 95 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG +SR+RA+LVR TL +A++ L + L LG GE K GG +R SILAD+VEALIG ++ Sbjct: 96 EGRLSRLRASLVREETLVIIAKQLNLSDYLILGVGERKGGGRQRASILADSVEALIGAIY 155 Query: 125 LD-SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 LD + TV+ +L W++ +++ KD K+RLQE LQ L LP Y V + G A Sbjct: 156 LDSQNFDTVKACVLAWFEDLFEKVKEQKVLKDAKSRLQELLQAHQLALPRYEVTETIGNA 215 Query: 184 HDQEFTIHCQVSGL------------SEPVVGTGSSRRKAEQAAAEQALKKL 223 +Q F + CQV + V G SRR AEQ AE L K+ Sbjct: 216 PNQIFVVSCQVEIIFDNKTAKPIAPTQALVTAQGESRRIAEQRCAEAMLAKI 267 >UniRef50_B5YDQ5 Ribonuclease III n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDQ5_DICT6 Length = 237 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 125/226 (55%), Gaps = 11/226 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYH 58 ++++++ K G +F+++ L+ +ALTH S ++ N+RLEFLGD++L+ +I L+ Sbjct: 16 ILSKVKEKTGISFDNKNLIIEALTHPSFKHENPHFEYDNQRLEFLGDAVLNMIITEILFQ 75 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 R+ EG +++ R +V+ TL + A+ LG+ + LG GE K GG + SIL+D EA Sbjct: 76 RYKEASEGILTQKRIYMVKEETLYKKAKSLNLGDLILLGKGEEKQGGREKISILSDLFEA 135 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 IG ++LD + + + ++ +EI + + D K LQ L P+Y+V + Sbjct: 136 FIGALYLDKGYEFTKNFVERIFR---EEIESVEMEIDWKNLLQSQLMKEGKK-PSYIVTR 191 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H++ F + + G G ++R+AE AA+ AL+K+ Sbjct: 192 EEGPEHNKIFYVELWIDNNKI-AEGEGKTKREAEIKAAKIALEKMR 236 >UniRef50_B6IN01 Ribonuclease III n=1 Tax=Rhodospirillum centenum SW RepID=B6IN01_RHOCS Length = 236 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 110/212 (51%), Gaps = 9/212 (4%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIANALY 57 ++ L+ LGY F H++LL QALTH S + + ERLEFLGD +L VIA L Sbjct: 9 PPLSELETGLGYHFRHRDLLVQALTHPSLGGVERNAGRGYERLEFLGDRVLGLVIAEWLL 68 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 RFP EG ++R LVR L +A LG LRL P E SGG + +ILAD E Sbjct: 69 ERFPAEAEGALARRHTALVRAEALTVVAETIGLGPFLRLAPSERDSGGQAKPAILADACE 128 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A+IG +F D ++ LI + ++ + +DPKT LQE+ GR PLP Y + Sbjct: 129 AVIGAIFQDGGLEPARTLIRTRWTPLIE--ADLSPPQDPKTALQEWALGRGRPLPAYETL 186 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G H F + +V G P TG S+R Sbjct: 187 SREGPDHAPVFRVRVRVEGAE-PATATGPSKR 217 >UniRef50_Q8RGX3 Ribonuclease 3 n=10 Tax=Fusobacterium RepID=RNC_FUSNN Length = 234 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 9/229 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRS-------ASSKHNERLEFLGDSILSYVIANALY 57 + L+ KL Y FN + LL+ AL H+S ++ NERLE LGD++L ++A LY Sbjct: 3 NLLDLEHKLNYYFNDRNLLKNALLHKSLGNERKEYKNQTNERLELLGDAVLDLIVAEYLY 62 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 + EG +++++A +V LA+++R+ +G+ L L GE+ SGG RESILAD+ E Sbjct: 63 KSYKNASEGPIAKLKAMIVSEPILAKISRQIGVGKFLMLSRGEVMSGGRNRESILADSFE 122 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A++G V++DS++ L+ + +D I + D K+ LQEY+Q +PTY +V Sbjct: 123 AILGAVYIDSNLDEARVFALSHIKQYIDHIEENEDILDFKSILQEYVQKEFKTVPTYELV 182 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 RG H +EF I V E +++KAEQ +A+ KL ++ Sbjct: 183 AERGPDHMKEFEIQVIVGNYKE--KAVARNKKKAEQLSAKALCIKLGVK 229 >UniRef50_B4U7T8 Ribonuclease 3 n=3 Tax=Aquificaceae RepID=RNC_HYDS0 Length = 232 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 70/224 (31%), Positives = 119/224 (53%), Gaps = 7/224 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS--SKHNERLEFLGDSILSYVIANALYHRFPRV 63 L+ K+GY F + L+++A TH S S S++ E LEFLGD++++++ N L FP Sbjct: 4 FELLEEKIGYRFKDKNLVKKAFTHISFSKSSENYEVLEFLGDALVNFMTVNILVEAFPNK 63 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG++S++++ L+ LA LA+ + + + GE G + SIL D EA + Sbjct: 64 KEGELSQLKSFLISEEFLASLAKSLNFEKYILISKGEELKGSNKNPSILCDVFEAFWAAI 123 Query: 124 FLDSDIQT--VEKLILNWYQTRLDEISPGDKQKD-PKTRLQEYLQGRHLPLPTYLVVQVR 180 ++DS + L + +++++ E+ + K KT LQE Q + P Y V+ V Sbjct: 124 YIDSGYDCKLTKSLFEHHFKSQILEMVNSNSLKQDYKTALQEITQKKWKERPIYNVISVE 183 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G H + FT+ C L G G+S++ AEQ AA+ L+ ++ Sbjct: 184 GPEHRKTFTVECLFKDLR--TTGKGNSKKYAEQEAAKNMLQIIQ 225 >UniRef50_Q4FUV6 Ribonuclease 3 n=11 Tax=Gammaproteobacteria RepID=RNC_PSYA2 Length = 265 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 104/221 (47%), Positives = 142/221 (64%), Gaps = 3/221 (1%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA-SSKHNERLEFLGDSILSYVIANALYHRFPRVD 64 + L RKLGY FN L + ALTHRS S K+ ERLEFLGD++L ++ ALYHR+P + Sbjct: 34 LAVLTRKLGYVFNDLSLAKLALTHRSFDSKKNYERLEFLGDALLGMIVGEALYHRYPTQN 93 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG ++RMRATLVR +L +A+ EL L LG GE K GG R SILAD VE+LIG ++ Sbjct: 94 EGRLTRMRATLVRQESLVIIAQNLELSNQLILGVGERKGGGRNRASILADAVESLIGAIY 153 Query: 125 LD-SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 LD D+ + +L+WY +D ++ KD K+RLQE+LQ + LP Y +++ RG A Sbjct: 154 LDSQDMNITRECVLSWYGDLIDNVNDQKALKDAKSRLQEWLQSKQFDLPHYELMETRGNA 213 Query: 184 HDQEFTIHCQVSGLSEP-VVGTGSSRRKAEQAAAEQALKKL 223 Q F + CQV+ ++ P + +G SRR AEQ AAE + +L Sbjct: 214 PHQLFVVRCQVNIINCPDITESGESRRIAEQKAAELMINQL 254 >UniRef50_C3P5Q0 Ribonuclease 3 n=173 Tax=cellular organisms RepID=RNC_BACAA Length = 245 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 79/229 (34%), Positives = 132/229 (57%), Gaps = 9/229 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALY 57 Q K+G TF ++LL QA TH S ++H NERLEFLGD++L ++ L+ Sbjct: 18 AFKLFQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLF 77 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 ++P + EG+++++RA +V +L A E G + LG GE +GG R ++LAD E Sbjct: 78 QKYPTMSEGELTKLRAAIVCEPSLVRFANELSFGSLVLLGKGEEMTGGRERPALLADVFE 137 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A IG ++LD ++TV + +++E + D K++LQE +Q Y ++ Sbjct: 138 AFIGALYLDQGLETVWGFLKEIVYPKINEGAFS-HVMDYKSQLQELIQRDGSGNIEYQIL 196 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Q +G AH++EF ++ ++ +G+G S+++AEQ AA +ALKKL+ + Sbjct: 197 QEKGPAHNREFVSRVTLNNVA-LGLGSGKSKKEAEQQAAAEALKKLKEQ 244 >UniRef50_Q73NX5 Ribonuclease 3 n=2 Tax=Treponema RepID=RNC_TREDE Length = 246 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 73/228 (32%), Positives = 123/228 (53%), Gaps = 7/228 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHN------ERLEFLGDSILSYVIANA 55 + Q++ G F LL A HRS S++HN ERLEFLGDS+L V A+ Sbjct: 12 RKQELLEFQKQAGLKFKDLRLLDLAFHHRSFSNEHNNFHANNERLEFLGDSVLGLVAASY 71 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY F EG++++++A+ V + L++ A + + L LG GE SGG +++ILAD Sbjct: 72 LYKSFEDRPEGELAKIKASAVSEDALSKTASKLNISNYLVLGRGEEMSGGREKKAILADA 131 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 +EA+IG ++DS + +K +L ++ + + D K+ LQE +Q + +P Y Sbjct: 132 LEAVIGAYYIDSGFKAAQKFVLRLLESTIHSVLEKKFISDYKSLLQELVQKKFKTVPKYE 191 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + + G HD+ F ++G +G ++++AEQ+ A+ A + L Sbjct: 192 LKKASGPDHDRTFWFSVSING-KVYGPLSGKTKKEAEQSVAKVAYENL 238 >UniRef50_C0QYN3 Ribonuclease III n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QYN3_BRAHW Length = 243 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 79/227 (34%), Positives = 138/227 (60%), Gaps = 8/227 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH------NERLEFLGDSILSYVIANALYH 58 ++N Q L Y F +++ L +A+THR+ +++ N+RLEFLGDS+LS +I++ L+ Sbjct: 6 ILNNCQTALKYEFRNKDHLLEAITHRTYANESKKKMKYNQRLEFLGDSVLSLIISDYLFK 65 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 ++ EG +S+++++LV +LA++++E +LG+ L LG GE SGG R+++L D EA Sbjct: 66 KYSSSKEGLLSKVKSSLVSQKSLADISKELKLGDFLLLGHGEEASGGRYRDNMLEDLFEA 125 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G ++LDS I + K ++ Y+ RL + + KD KT QE +Q +H P Y + Sbjct: 126 IVGAIYLDSGITSASKFVMRAYKERLKNLDIENFDKDYKTIFQELIQKKHKTSPIYKSYE 185 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 H+ F V+ + +G G S+++AE AA++AL K+E+ Sbjct: 186 YYDNNHE-MFKSEVYVNDKNF-ALGVGKSKKEAETNAAKKALDKIEM 230 >UniRef50_C2KW20 Ribonuclease III n=1 Tax=Oribacterium sinus F0268 RepID=C2KW20_9FIRM Length = 241 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 86/230 (37%), Positives = 135/230 (58%), Gaps = 12/230 (5%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANAL 56 +++L+ LGY F Q+LL ALTH S S++ N+RLEFLGD++L V + L Sbjct: 9 PSLSKLEEDLGYHFQDQKLLLHALTHPSYSNEMGHPKEASNQRLEFLGDAVLELVSSTLL 68 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 YH+ P + EG M+++RA LV + LA +A+ +L L LG GE + G R+S+L+D + Sbjct: 69 YHKKPVIQEGRMTKLRAALVCESALAVVAKSLQLSSYLLLGKGEEREGIQFRDSVLSDAL 128 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+IG ++LD ++ E + L +I +D KT LQEY + PL Y + Sbjct: 129 EAVIGAIYLDGGMKKAECFVR---GKVLSDIEHKTLFQDAKTMLQEYCTAKRYPL-EYDL 184 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 ++ G H + + + +V+ +G GSS++KAEQAAA AL+K+++E Sbjct: 185 LEESGPFHQRFYKVSVKVN-EEVYGIGEGSSKKKAEQAAAYFALEKIKVE 233 >UniRef50_A4XJW5 Ribonuclease III n=2 Tax=Clostridia RepID=A4XJW5_CALS8 Length = 224 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 127/221 (57%), Gaps = 5/221 (2%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPR 62 + +++KLGY F + LL+ ALTH+SA+ ERLEFLGD++L V++ L+ FP+ Sbjct: 1 MTDIEKKLGYRFKNPNLLKLALTHKSATHDDKSCYERLEFLGDAVLELVVSKYLFEHFPQ 60 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGG 122 + EG+++ +RAT+V TL+++A L + G E K G +SI +D +EA+ GG Sbjct: 61 LSEGELTNLRATIVCSETLSKVAETLNLKRYIVFGKNEKKEGFEGNKSIWSDVLEAIFGG 120 Query: 123 VFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +FL+S EK+++N + + + + G D KT+LQE++Q Y + E Sbjct: 121 IFLESGFDMAEKIVINLLEPFIKKAAEGKLFYDYKTKLQEFIQREKNVKIKY-IDYENFE 179 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + F + G ++ G G+S+++A+Q AA ALKKL Sbjct: 180 DNLSRFKSELYI-GKNKISEGYGNSKKEAQQEAALNALKKL 219 >UniRef50_A7NAR0 Ribonuclease 3 n=18 Tax=Francisella RepID=RNC_FRATF Length = 230 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 100/221 (45%), Positives = 139/221 (62%), Gaps = 3/221 (1%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRV 63 +R LGY F LL +ALTHRS + K+ ERLEFLGDS+LS+VIA LY +F + Sbjct: 3 PEYSRFYNILGYNFKDYTLLIRALTHRSKTKKNYERLEFLGDSVLSFVIAEVLYKQFTDL 62 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 EG +S++R+ LV+G TLA+LA ++ E + LG E GG +RE IL D EA+IG + Sbjct: 63 AEGKLSQLRSKLVKGTTLAQLASSLKMDEYIILGASEQ--GGNKREKILEDVFEAVIGAI 120 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGD-KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGE 182 +LDSD TV+K+IL WYQ + I+ K KD K++LQE L L LP Y + + G+ Sbjct: 121 YLDSDFATVKKVILKWYQPIISSINLDTIKVKDSKSKLQEILLQNALSLPEYSIETIDGK 180 Query: 183 AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 H+Q+FT+ L+ V G+SR+KAEQ AE+ ++ L Sbjct: 181 DHEQQFTVVAVSKDLNLRVKAQGTSRKKAEQKTAEKMIEML 221 >UniRef50_C3PH92 Ribonuclease III n=12 Tax=Corynebacterium RepID=C3PH92_CORA7 Length = 256 Score = 223 bits (568), Expect = 5e-57, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 125/222 (56%), Gaps = 8/222 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRV 63 L + LG N ELL ALTHRS ++++ NERLEFLGD++L IA LY ++P Sbjct: 25 LLKALGVEIND-ELLCLALTHRSFANENGHLPNNERLEFLGDAVLGLSIAAKLYEKYPSR 83 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 E D+S+MRA++V L+++ARE +GE + LG GE +GG ++SILADT EA++G + Sbjct: 84 PESDISKMRASIVSRYGLSDVAREIGVGEHVLLGKGEQSTGGRDKDSILADTTEAILGAI 143 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 + + ++L + ++D + D KT LQE +P Y G Sbjct: 144 YRQHGFEVARGVVLKLFAAKIDNAVVSGRHMDWKTTLQELCAELKAAMPVYSATS-TGPE 202 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 HDQ F V+GL+ GTG +++ AEQ AAE+A + L Sbjct: 203 HDQTFNAVATVAGLTV-GRGTGHNKKLAEQQAAEEACQALRE 243 >UniRef50_A8GM79 Ribonuclease 3 n=6 Tax=Rickettsia RepID=RNC_RICAH Length = 227 Score = 222 bits (567), Expect = 7e-57, Method: Composition-based stats. Identities = 74/226 (32%), Positives = 124/226 (54%), Gaps = 11/226 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 L++ LGY+F +QELL +AL+H S H ERLEFLGD++L+ V+ L+ Sbjct: 4 FETLEKLLGYSFKNQELLIEALSHPSLRQHHEYKYDKDYERLEFLGDAVLNLVVTEILFR 63 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 F +EG+++++R+ LV T+ + + L + + + GE +GG + + + +EA Sbjct: 64 NFASYNEGNLAKIRSYLVCKETICVVGTKLTLKDYIIMTYGEEVAGGRDNPNNIENAMEA 123 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 LI ++LDS+I+T +I ++ + + D PKT LQE+ Q LP Y +++ Sbjct: 124 LIAAIYLDSNIETTRNIIGKLWEEFIKIQNLTDYD--PKTALQEWAQASSHHLPIYRLIK 181 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 G AH FT+ +V + GTG S ++AE+ AA L +L+ Sbjct: 182 REGAAHSSTFTVLVKVKDYEQ--TGTGHSIKEAEKNAARDLLHRLQ 225 >UniRef50_Q2IIE0 Ribonuclease III n=5 Tax=Cystobacterineae RepID=Q2IIE0_ANADE Length = 385 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 78/220 (35%), Positives = 117/220 (53%), Gaps = 10/220 (4%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 ++P + L+ +LG +E ALTH+S ++H NERLEFLGD+++ ++ Sbjct: 22 LDP--VGALEARLGLAVADREAALAALTHKSYVNEHREDGLQDNERLEFLGDAVIDLAVS 79 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 + L RFP EGD+S+MRA +V LAE+AR +LG LRLG GE +GG ++ S+LA Sbjct: 80 HRLMERFPSAREGDLSKMRAAVVDEQGLAEMARTLDLGALLRLGRGEELTGGRQKSSLLA 139 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D +EA+I ++ + V + + + G +D KT+LQE Q R P Sbjct: 140 DAMEAVIAAIYRGQGLPAVLSFVDRFLGEAFARAAAGTLDRDFKTQLQELSQSRLRATPR 199 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 Y VV G H + F + + G G G S++ AEQ Sbjct: 200 YRVVAEHGPDHSKTFEVETDLRG-EVMGRGAGRSKKDAEQ 238 >UniRef50_Q0APC4 Ribonuclease III n=2 Tax=Hyphomonadaceae RepID=Q0APC4_MARMM Length = 228 Score = 221 bits (565), Expect = 9e-57, Method: Composition-based stats. Identities = 80/223 (35%), Positives = 125/223 (56%), Gaps = 8/223 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHR 59 I RL++++GY F + L+++ALTH S + ERLEFLGD +L + A AL+ Sbjct: 4 PIARLEQRIGYVFTDKRLIERALTHGSFAEGRKTIPTYERLEFLGDRVLGLMTAEALFKS 63 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 F + DEG ++ ++VR T A++AR +LG LR+G E K GG + SIL D E+L Sbjct: 64 FDKADEGALAPRLNSMVRKETCADVARAVDLGAALRIGKSEEKGGGRNKTSILGDACESL 123 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 + ++LD V+ + + R++ + K D K+ LQE+ +P Y + + Sbjct: 124 MAAIYLDGGRAAVQAFFDHHWGPRIE--ALKAKPLDAKSALQEWAAKTGRGVPRYELTER 181 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 G H FT+ V+ L+ P VG G S++ AE+AAAE+ LK+ Sbjct: 182 SGPDHRPVFTVQVTVTPLA-PAVGEGGSKQVAERAAAEELLKR 223 >UniRef50_B2SAD9 Ribonuclease 3 n=62 Tax=Rhizobiales RepID=RNC_BRUA1 Length = 245 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 109/215 (50%), Gaps = 6/215 (2%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPRVDE 65 L+ + G+ F + + L++ALTH S + + ERLEFLGD +L +A L+ FP E Sbjct: 22 LEERTGHRFLNLKRLERALTHSSVQAPARANYERLEFLGDRVLGLTVAEMLFEAFPEASE 81 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G++S LV T A +A E L + + G R ++ AD VEALI ++L Sbjct: 82 GELSVRLNALVNAETCAAIADEIGLADLIHTGSDIKSLNDKRLLNVRADVVEALIATIYL 141 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D ++ I +++ R + G ++D KT LQE+ + P Y ++ G HD Sbjct: 142 DGGLEAARSFIQRYWKKR--SLETGAARRDAKTELQEWAHQQGNVHPVYAILSRSGPDHD 199 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQAL 220 F + V G + P G G S+R AEQ+AAE L Sbjct: 200 PLFLVEVTVKGFA-PEKGEGRSKRIAEQSAAEAML 233 >UniRef50_Q1D5X9 Ribonuclease 3 n=1 Tax=Myxococcus xanthus DK 1622 RepID=RNC_MYXXD Length = 260 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 88/234 (37%), Positives = 135/234 (57%), Gaps = 9/234 (3%) Query: 1 MNPIV-INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVI 52 M+P + L+ +LG +F+ E +ALTH++ ++ N+RLEFLGDS+++ + Sbjct: 10 MSPSERVQLLESRLGLSFSRMETALEALTHKTYVNETRDKELKDNQRLEFLGDSVVNLAV 69 Query: 53 ANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESIL 112 ++ L R P + EGD+++MRA +V + LA +AR LG+ L LG GEL SGG + S+L Sbjct: 70 SHRLMARCPGLPEGDLTKMRARVVNEDGLARVARTIPLGDLLLLGRGELMSGGREKNSVL 129 Query: 113 ADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLP 172 AD +EA+ G VFL S + L+ ++ LDE+S G + D KT LQE R P Sbjct: 130 ADALEAVFGAVFLTSGLDAAVTLVDRYFADLLDEVSSGQGRLDYKTLLQEMAHERLKLQP 189 Query: 173 TYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y VV G H + F + + G + TG S+++AEQ+AA+ L+KL + Sbjct: 190 RYRVVSESGPEHSKVFEVELML-GETAFARATGRSKKEAEQSAAQATLEKLRED 242 >UniRef50_Q3B6L3 Ribonuclease 3 n=9 Tax=Chlorobiaceae RepID=RNC_PELLD Length = 276 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 82/234 (35%), Positives = 112/234 (47%), Gaps = 16/234 (6%) Query: 3 PIVINRLQRKLGYTFNHQ----ELLQQALTHRSASSK--------HNERLEFLGDSILSY 50 P + R L F + EL ALTHRS N+RLEFLGDS+L Sbjct: 27 PPSLTAFIRSL---FKGKALSLELYATALTHRSMVHDTTAPEITRSNQRLEFLGDSVLGL 83 Query: 51 VIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRES 110 +I+ LY RFP EG++S RA +V G +LA AR +LG L +G + S Sbjct: 84 IISEYLYRRFPEGTEGELSSYRAKIVNGKSLAGFARNLDLGIHLIIGESADQQRIRTSTS 143 Query: 111 ILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP 170 LAD EAL G ++LD + V + I + + + K+RL E+ Q LP Sbjct: 144 TLADAFEALTGAIYLDRGLDAVREFIEEQIIDSPAFEAMVSTENNHKSRLIEHTQSHQLP 203 Query: 171 LPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 P Y V+ G H++ FTI +G GT ++ AEQ AAE+A+ LE Sbjct: 204 PPVYTVLSEEGAEHEKTFTIEVSCNGRR-LGRGTALRKKDAEQLAAEEAMGALE 256 >UniRef50_Q1NXA7 Ribonuclease III n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NXA7_9DELT Length = 233 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 110/214 (51%), Gaps = 8/214 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANA 55 N + +GY F LL+ AL H S +++ NERLEFLGD++L +A Sbjct: 4 NSDPLAARLAAMGYRFKRTSLLELALVHSSRAAEAGKGVSSNERLEFLGDAVLGLAVAAL 63 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 LY P + EGD+SR RA LV LA +AR+ LGE +RLG GE +GG + SILA T Sbjct: 64 LYEAHPTMPEGDLSRHRAALVNEEHLAGMARQLALGEFIRLGRGEEATGGRDKPSILAAT 123 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EAL+G V+LD + L+ + + + D K+ LQE LQ RH P Y Sbjct: 124 FEALVGAVYLDGGYEPALALLRPLFAPWVANPPL-PRISDSKSALQEVLQQRHGEGPVYY 182 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 + G HD+ FT+ ++ G G G ++ Sbjct: 183 LENEEGPDHDKRFTVRVELQG-KVLGRGRGRGKK 215 >UniRef50_Q9Z5U2 Ribonuclease 3 n=9 Tax=Sphingomonadales RepID=RNC_ZYMMO Length = 223 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 3/207 (1%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61 N I+ +++ LG+ L +A+TH S + +RLEFLGD +L VIAN LY FP Sbjct: 3 NDAFISWIEKNLGHRPKDPALFLRAMTHPSHGNSDYQRLEFLGDRVLGLVIANWLYDLFP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 R EG +SR +LV G + A +AR L + LRLG G +++L D +EA+IG Sbjct: 63 REPEGKLSRRLNSLVSGASCASIARIVGLPQWLRLGKQARDDGAAASDNVLGDVMEAMIG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +FL+S I+ KLI ++ + K PK+ LQE+ + P Y +V G Sbjct: 123 AIFLESGIEAAGKLIHKYWAPLVTG--QESAPKHPKSALQEWAAAHNRRPPVYEIVSRTG 180 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSR 208 H+ FTI ++G+ E GSS+ Sbjct: 181 PQHNPCFTIQVSIAGVGE-ASAEGSSK 206 >UniRef50_A9WJ69 Ribonuclease 3 n=3 Tax=Chloroflexus RepID=RNC_CHLAA Length = 244 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 113/208 (54%), Gaps = 11/208 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK---------HNERLEFLGDSILSYVIANAL 56 + L+R +G TF + LLQ A HRS ++ NERLEFLGDS+L +V L Sbjct: 5 LAELERAIGITFRDRTLLQTAFMHRSLFNEQPHLLNHLTDNERLEFLGDSVLHFVTTTWL 64 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + FP DE ++ RA LV LAE A +F LG+ L GE GG R+ +LAD Sbjct: 65 FETFPDQDEATLTNWRAALVSTKGLAECAAQFNLGQYAYLSRGEDNPGGRSRQKLLADLF 124 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EAL+G ++LD ++T I+ ++Q R+++I D P TRLQE +Q R LP Y + Sbjct: 125 EALVGAIYLDQGLETARAFIVPFWQARIEQIIHIDLD--PTTRLQELMQARFKQLPDYSI 182 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGT 204 + RG H +E+ + V+G G+ Sbjct: 183 EEERGPEHQREYVMAVTVAGRKFTGSGS 210 >UniRef50_A0YTE9 Ribonuclease III n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YTE9_9CYAN Length = 395 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 80/230 (34%), Positives = 131/230 (56%), Gaps = 15/230 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 + L + F LLQ+ALTHR+ +H NE+LEFLGDS+L+++ + LY Sbjct: 166 LKELLETI--PFQDARLLQRALTHRTYVFEHPTKTEGDNEQLEFLGDSVLNFLAGDYLYE 223 Query: 59 RFPRV-DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 ++ DEG+++R R++ V + A+ A + LGE ++LG GE GG + S+L++T E Sbjct: 224 QYSHRRDEGELTRRRSSFVDNSQFAQFAVKLNLGEWMQLGKGEELQGGRTKSSLLSNTFE 283 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRL----DEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 A++G +LDS I+ V +LI ++++ ++ P D K RLQ Q LP+P Sbjct: 284 AVMGAYYLDSGIEAVRELIKPFFESVDTATVEDSIPQQTLIDVKGRLQNLAQTNDLPIPE 343 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 Y VV G+ H + FT+ +++ GTG+ +++AE+ AA AL+ L Sbjct: 344 YYVVSEMGKDHAKIFTVEVRIN-RKFYGRGTGNKKKEAEKQAAIDALQCL 392 >UniRef50_B3E2K4 Ribonuclease III n=1 Tax=Geobacter lovleyi SZ RepID=B3E2K4_GEOLS Length = 228 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 9/206 (4%) Query: 12 KLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYHRFPRVD 64 LG++F +Q LLQQALTH S ++ +RLEFLGD++L +++A+ L FP + Sbjct: 8 ILGHSFINQRLLQQALTHPSYLNEARQEGAADYQRLEFLGDAVLGFLLADLLCQHFPALP 67 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EGD+SR+R++LV LA LA + + + +G G + GG SILAD EAL+G + Sbjct: 68 EGDLSRLRSSLVDQPRLARLAVDAGIPPLILMGKGAEREGGRTNPSILADVFEALLGAIH 127 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDK-QKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 D+ V++++ + Y ++ I+ G D K+ LQE L R P Y +V +G Sbjct: 128 CDAGFAAVQQVVKHIYAPLVNAIAAGTPAHHDAKSELQELLAARKQAAPVYNLVDQQGPD 187 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRR 209 HD+ F I V G+ G G S++ Sbjct: 188 HDRLFCIEVSVDGMP-LGQGQGRSKK 212 >UniRef50_A5CEW8 Ribonuclease III n=2 Tax=Orientia tsutsugamushi RepID=A5CEW8_ORITB Length = 251 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 130/225 (57%), Gaps = 6/225 (2%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANAL 56 ++ ++ LQ ++GY FN +LL +ALTH S + +K+ +RLEFLGD IL+ VI+ L Sbjct: 19 VDYTKLDALQSEIGYNFNSIDLLIEALTHPSINQYGYTKNYQRLEFLGDVILNLVISETL 78 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + F +EG +++ RA LV ++ +A++ L + + + E K GG ++ + +T+ Sbjct: 79 FKNFSHYNEGKLAKSRAFLVCNESICLIAQKINLHKYIIMTANEEKCGGRSNKNNIENTM 138 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+IG V+LD I ++ ++ + ++ + + DPK+ LQE+ Q ++ +PTY + Sbjct: 139 EAVIGAVYLDGGIHVIKDIVNSLWKVLIKDHELY-LIADPKSALQEWSQSKNFGIPTYTL 197 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 G++H F + +V G EP G G++ + A++ AA+ L Sbjct: 198 SSKTGQSHSPLFEVMVKV-GRLEPQYGKGTTIKTAQKNAAQLMLS 241 >UniRef50_C1SM31 Ribonuclease III n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM31_9BACT Length = 209 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 6/208 (2%) Query: 24 QQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 +ALTHRS + + + ERLEFLGD++L ++ L R+ DEG +S++R V Sbjct: 2 LEALTHRSYAHEKKNKQNYERLEFLGDAVLQLIVTEYLLDRYKDYDEGLLSKLRGYFVSE 61 Query: 79 NTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILN 138 L+ +A E +LGE + LG GE SGG +ES+L D E+++ ++LD +I+ Sbjct: 62 GFLSRIAIELKLGEHILLGKGEKASGGKYKESLLCDIFESVVAAIYLDGGYGFARDIIIR 121 Query: 139 WYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLS 198 + +R+DE D K+ LQ+ Q + LP Y V+ +G HD+ F + V Sbjct: 122 HFGSRIDEDISNSSFVDAKSELQKISQRKFGTLPDYTVLDEKGPEHDKIFVVRVDVE-TL 180 Query: 199 EPVVGTGSSRRKAEQAAAEQALKKLELE 226 G G +++ AE+ AA+ AL+KL E Sbjct: 181 VSEQGIGKTKKSAEKDAAKNALRKLGNE 208 >UniRef50_C1TMA2 Ribonuclease III n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMA2_9BACT Length = 244 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 115/226 (50%), Gaps = 10/226 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHR 59 ++ +Q +LGY+F ELL++ALTH S + + NERLEFLGD++L + L+ Sbjct: 9 NLSLIQDRLGYSFTDIELLREALTHSSYAHESGLRSWNERLEFLGDAVLELATSTRLFRA 68 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSG-GFRRESILADTVEA 118 +DEG ++R+RA LVR L A L LR+ G K G G S+ AD +EA Sbjct: 69 MKDMDEGGLTRLRARLVRKEALLTWAEALGLSGILRVNRGLRKKGEGCDLSSMHADAIEA 128 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLD---EISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 + G V++D E ++ + + I G+ DPK+ LQ+ LQ + PLP Y Sbjct: 129 IFGAVYMDGGYDMAESVVNRYLDFLFEKGDYIQDGNSSIDPKSELQQILQIKGEPLPEYR 188 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 ++ G H F + VSG+ G G S ++AE AA L Sbjct: 189 IMSREGPPHSPSFEVELYVSGV-LLSSGRGRSIKEAEVQAALDGLS 233 >UniRef50_B0SDK6 Ribonuclease III n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDK6_LEPBA Length = 242 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 9/227 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 + LQ +F LL A HRS +++ NERLEFLGDS+L + A LY Sbjct: 17 LQELQSITDTSFKDISLLHLAFVHRSFANEDSDRYLSDNERLEFLGDSVLGILAAEYLYK 76 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 P+ EG ++++++ +V +A+LAR + + L LG GE K G ++ AD EA Sbjct: 77 SLPKGKEGILAKLKSKMVSAPAIAKLARFYRFPDFLLLGKGE-KEKGEANLNLQADCFEA 135 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +G ++LD + + + +QT + ++ KD KT LQEY Q + LP Y++++ Sbjct: 136 FLGALYLDQGLNSCRIFLTPHFQTMEKGVESAEETKDYKTILQEYCQKKWKKLPEYILLK 195 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 G HD++F++ G G ++R+AEQ AA+ AL+ L+L Sbjct: 196 EEGPDHDKDFSVSVSCENY-FQSNGDGKNKRRAEQMAAKAALRILKL 241 >UniRef50_A5V230 Ribonuclease 3 n=2 Tax=Roseiflexus RepID=RNC_ROSS1 Length = 237 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 115/212 (54%), Gaps = 10/212 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH---------NERLEFLGDSILSYVIANAL 56 ++ L +LG TF+ Q LL+QALTH S ++H NERLEFLGD+I++++ A + Sbjct: 5 VDELSARLGVTFSDQRLLEQALTHSSFLNEHVEERMHLDSNERLEFLGDAIINFLAARLV 64 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + RFP EG+++ R L+R TLA A+ + LG + L GE SG +R+++LADT Sbjct: 65 FERFPDAGEGELTAWRTALIRTETLAGFAQRYNLGAYVLLARGEESSGARQRQALLADTF 124 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+I +FLD + V +L ++ L + D K+RLQ +Q P Y Sbjct: 125 EAVIAALFLDQGLNAVRTFLLPLFEAELASLPDRTLPVDYKSRLQARIQAERRVTPRYHE 184 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 + G H EFT+ + +G G G S+ Sbjct: 185 IDRSGPEHRPEFTVEVR-AGEERLGTGKGPSK 215 >UniRef50_Q0C3T9 Ribonuclease III n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C3T9_HYPNA Length = 234 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 11/230 (4%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIA 53 + P + Q +G+ F +L++ALTH SA N+RLEFLGD +L+ +IA Sbjct: 5 LPPEALKEAQEIIGFKFKDAAILERALTHPSAIPPSGDTVKLSNQRLEFLGDRVLNLIIA 64 Query: 54 NALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILA 113 L R EGD++ LV+ AE R L + L E+ +GG RES L Sbjct: 65 ERLIERRQSDSEGDLAPRLNRLVKKGACAEAMRFLGLQRFILLSESEVAAGGHDRESTLG 124 Query: 114 DTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 D EA+I ++ + + K I + + + + KDPKT LQE+ QG+ PLP Sbjct: 125 DACEAVIAAIYQEGGLAAARKFIERAWAPQFENVPAET--KDPKTLLQEWAQGQGHPLPD 182 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 Y+V G H ++ + +++ TG S+R+AE+ AA L+ L Sbjct: 183 YVVTGRSGPDHAPQYEVEVRLAVGK--ATATGPSKREAERHAAALMLRTL 230 >UniRef50_C7GYL4 Ribonuclease III n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYL4_9FIRM Length = 252 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 129/233 (55%), Gaps = 11/233 (4%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSAS--------SKHNERLEFLGDSILSYVIANA 55 ++ L+ K+ Y F+ + LL ALTH S N+RLE+LGD+IL VI Sbjct: 2 SNLDALETKINYKFSDRNLLITALTHVSMLGKVHNMDRKSTNQRLEYLGDAILYLVIGEL 61 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ + P DEG++++ R+ +V ++L+E+A++ +LG + + K G R E+ILADT Sbjct: 62 LFIKRPDYDEGNLTKARSNIVNNHSLSEMAKKLDLGRHIEMDSSTEKHMGRRNEAILADT 121 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPL--PT 173 EAL+G +FLD+ + + I + R++E + G+ + D KTRLQE + + Sbjct: 122 FEALMGAIFLDAGYEKTHEFINKLFIKRIEEAATGEAKADYKTRLQECVHACGITNYYIK 181 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 Y + +G+ H + F I ++ ++ G G S+++A+Q AA + ++ + Sbjct: 182 YHTISEKGDQHCKTFRIGAYLNN-TKLSEGVGKSKKEAQQNAARLFFENMKND 233 >UniRef50_B5JG37 Ribonuclease III n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG37_9BACT Length = 263 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 82/231 (35%), Positives = 127/231 (54%), Gaps = 8/231 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSA------SSKHNERLEFLGDSILSYVIAN 54 + + RL+ KLGYTF + LL Q+LTH S K+N+RLEFLGDS++ V+ Sbjct: 31 LPQAKVKRLENKLGYTFKTKGLLHQSLTHPSFLLNTKDQLKNNQRLEFLGDSVIQLVLTE 90 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 LY +FP + EG ++ +R+ RG+ +A +ARE +LG+ L L P + +G +S L D Sbjct: 91 KLYEKFPSLREGKLTSIRSGYARGDYMAGIARELKLGDYLILKPKDRNAGVAENDSALGD 150 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQG-RHLPLPT 173 EALIG ++LDSD +T K+IL Y + +PK +LQE +Q Sbjct: 151 AFEALIGAIYLDSDFETSRKIILELYNYLDTAPTAKGVIANPKGKLQELIQPVHGNNALR 210 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 Y + GEAH++EF + + G G ++++A + AA A+ K++ Sbjct: 211 YETIAQTGEAHEREFEVAVFCHD-EQLGKGAGRTKKEAAEKAALIAIAKID 260 >UniRef50_D0YUT0 Ribonuclease III n=3 Tax=Mobiluncus RepID=D0YUT0_9ACTO Length = 269 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 107/202 (52%), Gaps = 10/202 (4%) Query: 19 HQELLQQALTHRSASSKH--------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 +LL A+THRS S +H NERLEFLGD++L ++ LY FP EG +++ Sbjct: 35 DPDLLVLAMTHRSFSHEHGKTGSRGTNERLEFLGDAVLQIIVTEYLYRNFPDEPEGTLAQ 94 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 MRA V LAE+AR+ LGE LRLG GE + GG ++SIL+DT+EALIG FL + Sbjct: 95 MRAATVSQTPLAEVARKIHLGEYLRLGVGEDRQGGRDKDSILSDTLEALIGATFLSCGLS 154 Query: 131 TVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 ++ + L D KT LQE L L TY VV G H + F+ Sbjct: 155 VTRVVVERHLRRFLRNAPRRAVTLDWKTTLQELLSAADLGEVTYEVVA-TGPDHQKHFSA 213 Query: 191 HCQVSGLSEPVVGTGSSRRKAE 212 V G + G GSS++ AE Sbjct: 214 QALVEGENW-GEGQGSSKKIAE 234 >UniRef50_Q4JUY7 Ribonuclease 3 n=9 Tax=Corynebacterium RepID=RNC_CORJK Length = 244 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 120/208 (57%), Gaps = 8/208 (3%) Query: 21 ELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 +LL+ ALTHRS ++++ NERLEFLGD++L +A LY +FP E D+S+MR+ + Sbjct: 36 DLLRLALTHRSFANENGHLPNNERLEFLGDAVLGLAVAEQLYRQFPERAESDISKMRSGV 95 Query: 76 VRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKL 135 V LA++AR +G+ + LG GE+ +GG + SILAD+VE+++G ++L + Sbjct: 96 VNMYALADVARRLGMGDYILLGRGEMLTGGKDKHSILADSVESMLGAIYLHHGFEVARAT 155 Query: 136 ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVS 195 +L + ++ E D KT L E L LPLPTY V G HD+ F + Sbjct: 156 VLRLFAEKITEAPTTGLTMDWKTVLLEKLSDMKLPLPTYEVRGE-GPEHDKTFYATVTIE 214 Query: 196 GLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G G +++ AE AAA+QA++KL Sbjct: 215 D--LVTHGEGHTKKVAEHAAAKQAVQKL 240 >UniRef50_Q049R1 DsRNA-specific ribonuclease n=4 Tax=Lactobacillus delbrueckii RepID=Q049R1_LACDB Length = 231 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 11/225 (4%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYH 58 I L K G F LL++A TH S +++ E+LEFLGD++L + +++ LY Sbjct: 7 IKMLDEKYGIRFKDVRLLEEAFTHSSYLNENPGKTLGNYEKLEFLGDAVLEFTVSDYLYR 66 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 F ++EG+++R+R+ +VR +++A + E + LG GE K+GG +R+++L D EA Sbjct: 67 HFQHLNEGELTRLRSNIVRTEGFSKVALDCGFKEEINLGVGEEKAGGRKRKALLEDVFEA 126 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 G +FLD I+ VEK + + +D KT LQE LQ Y V+ Sbjct: 127 FNGALFLDQGIEAVEKFLSQTVYPLIA-AGYFTPSRDFKTDLQELLQQNGSVTIEYRVLN 185 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + F + V G G G +++KAEQ AA AL+ L Sbjct: 186 ESQQP--PHFEVEVLVDGKK-LASGEGRNKKKAEQDAASHALEHL 227 >UniRef50_UPI00016C442D ribonuclease III n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C442D Length = 215 Score = 216 bits (550), Expect = 6e-55, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 21 ELLQQALTHRSASSK---HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVR 77 ELL+ ALTH S+++ NERLEFLGDS+L V LY RFP EGD++++++ +V Sbjct: 2 ELLRSALTHTSSANTRAASNERLEFLGDSVLGLVTCEQLYRRFPEYQEGDLTKVKSAVVS 61 Query: 78 GNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLIL 137 T A ++E LG+ L LG G + S G +ILA+ E+L+ VFLD +L Sbjct: 62 RKTCARFSQEIRLGDFLFLGRG-VNSNGEMPLNILANAFESLVAAVFLDGGWDAARDFVL 120 Query: 138 NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL 197 ++ +D ++ + K++LQ Q + P Y ++ +G +++ F + QV Sbjct: 121 DFIDPEVDRVARDAISANAKSQLQTVTQREYGDTPRYFLLDEQGPDNNKCFKVAAQVHDE 180 Query: 198 SEPVVGTGSSRRKAEQAAAEQALKKLELE 226 P G ++++AE AA AL + E Sbjct: 181 RFPA-AWGHTKKEAELKAAMNALAHIHGE 208 >UniRef50_A7BCY7 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCY7_9ACTO Length = 240 Score = 215 bits (549), Expect = 7e-55, Method: Composition-based stats. Identities = 90/223 (40%), Positives = 120/223 (53%), Gaps = 8/223 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFP 61 L G LLQ AL HRS +++ +NERLEFLGDS+LS VIA LY ++P Sbjct: 16 EALVEAWGTRI-DAPLLQLALVHRSYANEAGGIANNERLEFLGDSVLSIVIAQKLYEQYP 74 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 V E D+SRMRA V LA AR LG+ + LG GE GG ++SIL+DT EALIG Sbjct: 75 DVAESDLSRMRAATVSQQPLAAAARRIGLGDFVFLGKGESMHGGRDKDSILSDTFEALIG 134 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +L S ++ ++IL L + + +D KT L EY Q L +Y V + G Sbjct: 135 ATYLTSGLEEARRVILERLSFLLVDAPSRGQHQDWKTILIEYSQAHGLGEVSYEV-EGEG 193 Query: 182 EAHDQEFTIHCQVSGLSE-PVVGTGSSRRKAEQAAAEQALKKL 223 H + FT VS + G SS++ AE AAA+ A+ +L Sbjct: 194 PDHQRVFTARAFVSERPDPIGSGQASSKKHAENAAAQDAMSRL 236 >UniRef50_A4E6T0 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E6T0_9ACTN Length = 241 Score = 215 bits (549), Expect = 7e-55, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 7/209 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 + R Q LG+ FN++ LL+ ALTH SA ERLEFLGDSIL V+A +L+ + Sbjct: 7 LTRAQEILGHEFNNKVLLRAALTHPSAVEGQPVSASYERLEFLGDSILGAVVARSLFESY 66 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P DEG ++R++ +LV G TL+E++ E + + + G E +G S L + E+L+ Sbjct: 67 PEFDEGKLTRLKVSLVSGATLSEVSHELGIDDIIIFGASETGTGARGLHSALENVYESLV 126 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G ++LD+ + I + L + +PK+ LQE +Q P Y +V Sbjct: 127 GALYLDAGWDVAAEFIHRTLKPHLAS-ERAEHPANPKSFLQECVQADGHEPPAYKLVGSE 185 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G AH FT + G+ + GTGSS++ Sbjct: 186 GPAHAPTFTAVVLIDGIRQ-GRGTGSSKK 213 >UniRef50_D0RNU3 Ribonuclease III n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNU3_9RICK Length = 225 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 73/229 (31%), Positives = 123/229 (53%), Gaps = 7/229 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSAS---SKHNERLEFLGDSILSYVIANALY 57 M + ++++ L FN++ L++QA TH+S S + +NERLEFLGD +L VIA+ L Sbjct: 1 MKKNDLAQVEKILEIKFNNKSLIEQAFTHKSKSVNINNNNERLEFLGDRVLGLVIASYLN 60 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 +P+ EG + + A+LV T +++ E+ L L + K + IL D E Sbjct: 61 DNYPKDSEGVLDKKLASLVNKETCSKIISSLEIDRFLSLSEAQ-KQNKAGNKKILGDLCE 119 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 ++IG VF+D + +K IL ++ L + DPKT+LQEY + LP Y + Sbjct: 120 SIIGAVFMDKGFEQTKKFILKIWKENLKNTT--QVFIDPKTKLQEYSLKLYKKLPVYKYI 177 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G +H F + + S+ V TG+S++ AE AA++ ++ L+++ Sbjct: 178 SNSGPSHKPNFRVSVSIE-QSKSFVATGTSKKNAETNAAKKLIEYLKIK 225 >UniRef50_UPI0001553722 PREDICTED: similar to ribonuclease III, nuclear n=1 Tax=Mus musculus RepID=UPI0001553722 Length = 1241 Score = 215 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G F H LL +A T R+ H N+R+EFLGDSI+ V L+ F Sbjct: 972 LTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHF 1031 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++ +R++LV T A++A E + E + K R LAD +E+ I Sbjct: 1032 PDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITN-DKTKRPVALRTKTLADLLESFI 1090 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 +++D D++ V + + RL E DPK++LQ+ +G+ +P Y Sbjct: 1091 AALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYK 1150 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +Q G +H + +T+ G G G S ++AE AA AL+K Sbjct: 1151 TLQTVGPSHARTYTVAVYFKG-ERIGCGKGPSIQQAEMGAAMDALEK 1196 Score = 94.1 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ + LY+ FP ++EG ++ R +V+ LA LA+ L Sbjct: 829 NHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKSL---SFL 885 Query: 95 RLGPG----ELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPG 150 G +L D ++L+G V+L+ ++ ++L D Sbjct: 886 IYKVGSTLASTHMLLLIHSVMLTD--QSLLGAVYLEGSLEEAKQLFGRLLFNDPDLREVW 943 Query: 151 DKQKDPKTRLQE 162 +LQE Sbjct: 944 LNYPLHPLQLQE 955 Score = 42.5 bits (99), Expect = 0.011, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 17/27 (62%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA 32 + L + +GYTF + LLQ A+TH S Sbjct: 742 LMHLDKLIGYTFQDRCLLQLAMTHPSH 768 >UniRef50_Q9NRR4 Ribonuclease 3 n=53 Tax=Eumetazoa RepID=RNC_HUMAN Length = 1374 Score = 215 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G F H LL +A T R+ H N+R+EFLGDSI+ V L+ F Sbjct: 1107 LTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHF 1166 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++ +R++LV T A++A E + E + K R LAD +E+ I Sbjct: 1167 PDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITN-DKTKRPVALRTKTLADLLESFI 1225 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 +++D D++ V + + RL E DPK++LQ+ +G+ +P Y Sbjct: 1226 AALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYK 1285 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +Q G +H + +T+ G G G S ++AE AA AL+K Sbjct: 1286 TLQTVGPSHARTYTVAVYFKG-ERIGCGKGPSIQQAEMGAAMDALEK 1331 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 63/128 (49%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ + LY+ FP ++EG ++ R +V+ LA LA++ EL + Sbjct: 963 NHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFM 1022 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQK 154 G +A+ EALIG V+L+ ++ ++L D Sbjct: 1023 LYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNYP 1082 Query: 155 DPKTRLQE 162 +LQE Sbjct: 1083 LHPLQLQE 1090 Score = 42.5 bits (99), Expect = 0.011, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 17/27 (62%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA 32 + L + +GYTF + LLQ A+TH S Sbjct: 876 LMHLDKLIGYTFQDRCLLQLAMTHPSH 902 >UniRef50_Q253V2 Ribonuclease 3 n=13 Tax=Chlamydiaceae RepID=RNC_CHLFF Length = 237 Score = 215 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 9/226 (3%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANA 55 N I I ++ KL +TF +LL ALTH S ++ +ERLEFLGD++L ++ Sbjct: 3 NLINIKEVEAKLKFTFTQPQLLVTALTHPSYRNETVTITEDSERLEFLGDAVLCLIVTEH 62 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADT 115 L+ FP +DEG +S RA L+ + + LGE L +G GE R S A+ Sbjct: 63 LFLLFPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLLIGKGERIQNERGRTSAYANL 122 Query: 116 VEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYL 175 EA++G V+LD + ++ + ++ D + +PK RLQ+ Q + LP Y Sbjct: 123 FEAILGAVYLDGGLAPARQITVPLLPSKKDILPL--MLGNPKNRLQQLTQKQLRTLPVYQ 180 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 + I V+ G S+++AE+ AA++AL Sbjct: 181 STPWISPQGAPGYHIRVIVND-EIWGEGFALSKKEAEKLAAQEALD 225 >UniRef50_B4WL11 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WL11_9SYNE Length = 228 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 10/216 (4%) Query: 16 TFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 TF + L QQA+TH+S +++ HNERLEFLGD+IL+++ A L+ RFP+ EG+++ Sbjct: 15 TFTNSALWQQAMTHKSFANEQPTATEHNERLEFLGDAILTFLSAEYLFVRFPKQSEGELT 74 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDS-- 127 MR+ LV + L A+ +L E LRLG G K G + +L EALIG FLD Sbjct: 75 PMRSALVDQSQLHRFAQGLKLDEYLRLGKGAEKEGARKSARLLCSAFEALIGAYFLDQEH 134 Query: 128 DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQE 187 ++Q V+ I +++ + KD KTRLQE+ Q +P Y+ + G H +E Sbjct: 135 NLQLVKDYITPIFESAIAPDVEAG-VKDDKTRLQEWAQKTTGSVPEYVEISTLGPDHAKE 193 Query: 188 FTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 F I Q+ G S G+G S++KA++ AA L+ L Sbjct: 194 FVIEVQIGGKS-YGRGSGRSKQKAQKLAARSTLEML 228 >UniRef50_D0WNC5 Ribonuclease III n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNC5_9ACTO Length = 228 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 119/227 (52%), Gaps = 6/227 (2%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHR 59 + L + G LL+ ALTHRS + +H NERLEFLGDS+L ++ A+ ++ Sbjct: 1 MSYRELVERWGVDIRRP-LLRLALTHRSFAFEHDEPHNERLEFLGDSVLGFITADKVFRE 59 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FP EGDMSRM+ V LA +ARE ELG +RLG GE SGG ++SIL+DTVEAL Sbjct: 60 FPDSREGDMSRMKTFAVSEKALASIARELELGRFIRLGRGEDLSGGRDKDSILSDTVEAL 119 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 I +L + K++ ++++ S D +T +E R + + Sbjct: 120 IAATYLQHGLDVARKIVERLVAAKIEDASLLGPNLDWQTSFEEVAHERGMVGSLQFELTS 179 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G H + +T + G GTGSS++ A QAAA+ A + + E Sbjct: 180 EGPDHQRVYTAVASMGG-RVWGEGTGSSKKTARQAAAQVAYRTITAE 225 >UniRef50_Q2SRZ8 Ribonuclease 3 n=4 Tax=Mollicutes RepID=RNC_MYCCT Length = 232 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 8/229 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYH 58 + I K N Q++ ++ALTH S +++ +RLEFLGD+IL ++ L+ Sbjct: 1 MNIKNFFEKYNIKINDQQIYKEALTHNSYANERKLKYSYQRLEFLGDAILQMYVSKFLFF 60 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 + ++ EG+++R+R++ VR +L+ +A++ LG+ +RLG GEL + G+ ++SILAD EA Sbjct: 61 HYSKLGEGELTRLRSSTVREESLSRIAKDINLGQLIRLGHGELMTKGYEKQSILADIFEA 120 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L V++D + + + + + + + KD K+ LQE LQ Y++ Sbjct: 121 LTAAVYIDQNEDGLLIWLEQTLFKYMKDPTFINVTKDFKSELQELLQSEKRSDLKYIIEN 180 Query: 179 VR--GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 + +T+ + G VG G S+++AEQ AA L KL+ Sbjct: 181 EEFFVNENKTLYTVSVNLDGQKF-GVGKGYSKQEAEQNAASDCLSKLKK 228 >UniRef50_C0VZE3 Ribonuclease III n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZE3_9ACTO Length = 256 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 111/224 (49%), Gaps = 8/224 (3%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHR 59 + L +F ELL ALTHRS + + NERLEFLGDS+LS ++ LY Sbjct: 19 NLADLFGVWQISF-DPELLILALTHRSFAFEVGNIEPNERLEFLGDSVLSIIVTEYLYKN 77 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 +P+ E ++SRMR +V TL+++AR LG+ + LG GE +GG R+SIL D EA+ Sbjct: 78 YPQSSEANLSRMRGAIVSEKTLSQVARNIRLGDFILLGKGENLTGGRDRDSILCDMTEAM 137 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG +L ++ +++ + L+ K D KT LQEY L P Y + Sbjct: 138 IGATYLSHGLEATRRIVEYHLRPFLERAVELGKSSDYKTTLQEYCAEASLGEPIYEA-EG 196 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G H + F V G G SS++ A+ AA + Sbjct: 197 FGPDHARYFIATVTVGG-ELVGHGQASSKKGAKSEAARAGYFNI 239 >UniRef50_C7N559 Ribonuclease III n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N559_SLAHD Length = 300 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 120/221 (54%), Gaps = 8/221 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 I R Q +G F + ++L A+TH SA+ ERLEFLGDSIL ++AN +HR+ Sbjct: 12 IQRAQEIIGTQFGNTDILLHAITHPSATEGKPVKLSYERLEFLGDSILGAIVANEAFHRY 71 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P +DEG ++R++ LV G +L+++A E + + G E +G S L + EA++ Sbjct: 72 PDLDEGGLTRIKVALVSGASLSKVAAELGFEDIIVFGSSEQGTGKRGLHSALENVYEAVV 131 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD ++ ++ R+ + ++PK+ LQE LQ + PTY +V+ + Sbjct: 132 AALYLDQGMEGARSFVMKTLVPRMSR-ELATEPENPKSALQEKLQEEGI-TPTYKLVETQ 189 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 G HD+ F +G+ G G +++++E AA+ AL+ Sbjct: 190 GPPHDRTFVSQV-FAGMKALASGMGRTKKESESQAAKAALE 229 >UniRef50_P74368 Ribonuclease 3 n=1 Tax=Synechocystis sp. PCC 6803 RepID=RNC_SYNY3 Length = 231 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 14/218 (6%) Query: 19 HQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRA 73 +L +ALTHRS ++H +RLEFLGD++L +V+ L+ R+P E +++R+R+ Sbjct: 11 DPQLKLEALTHRSYCNEHPGTPSYDRLEFLGDAVLGFVVGRILFERYPHFTEAELTRLRS 70 Query: 74 TLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVE 133 LV N LA LAR + +RL + G SILAD E+L+G LD + VE Sbjct: 71 QLVNQNQLAYLARFLHIAPEIRLSQSLARDDGQSSPSILADVFESLLGAALLDRGLTAVE 130 Query: 134 KLILNWYQTRLDEISPGDKQKDP--------KTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 I + L++ + P K+ LQ++ + LP Y ++ G H Sbjct: 131 DFIQELFVPILEQWEKSQDGRSPKLVPTMDVKSMLQQWALAKTKQLPEYELINTSGPPHA 190 Query: 186 QEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 QEFT +V+G G+G S++ A + AA +ALK L Sbjct: 191 QEFTFTVKVAG-KIHGQGSGPSKQIATKQAALEALKSL 227 >UniRef50_A9B5J8 Ribonuclease III n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5J8_HERA2 Length = 234 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 11/212 (5%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANAL 56 + +N+LQ +LGYTFN L+ A+ HRS +H NERLEFLGD++L+++ + L Sbjct: 1 MDLNKLQAELGYTFNDLNFLRAAMLHRSYVHEHPEAGSESNERLEFLGDALLNFICGSFL 60 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 +H FP + EGD+++ RA LV+ TLA LAR F LG +++ GE ++ R+++LAD Sbjct: 61 FHEFPELGEGDLTKTRAMLVQTRTLAGLARRFNLGSYVQISRGEERAKARERDNLLADAF 120 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EAL+ + LD + +L + + G + +D KT LQ+Y+QGR P+Y Sbjct: 121 EALLAAIALDGGWEAARNFVLPLLK---SVKASGVQNQDYKTDLQQYVQGRINLTPSYRE 177 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 V V G H++ +TI +G + VG G+S+ Sbjct: 178 VNVTGPDHERTWTIEVW-AGDALLGVGVGTSK 208 >UniRef50_C8WGU4 Ribonuclease III n=2 Tax=Coriobacteriaceae RepID=C8WGU4_EGGLE Length = 281 Score = 213 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 8/223 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 + Q LGY F ++LL A+TH SA+ ERLEFLGDSIL ++A + RF Sbjct: 11 LAVAQEILGYRFADEQLLLSAITHPSATEGKSVKYSYERLEFLGDSILGAIVATIAFDRF 70 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 +DEG ++R++ LV G +L+++A + + G E +G S L + EA++ Sbjct: 71 HDLDEGGLTRIKVALVSGASLSDVAERLGFADVIVFGSSETGTGRRGLHSALENVYEAVV 130 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 +FLD I+ E + R+ + + +PK+ LQE LQ + PTY +V+ + Sbjct: 131 AALFLDGGIEAAEGFVRATLIPRMSADMAREPE-NPKSALQEKLQEDGI-TPTYKLVETQ 188 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 G HD+ F +G GTG ++++AE AA+ L +L Sbjct: 189 GPPHDRTFVAQV-FAGSQGLARGTGRTKKEAESQAAKSTLARL 230 >UniRef50_A6LNE7 Ribonuclease III n=2 Tax=Thermosipho RepID=A6LNE7_THEM4 Length = 231 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 77/225 (34%), Positives = 132/225 (58%), Gaps = 12/225 (5%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHRFPRV 63 ++ +GY F ++ELL ALTH S ++++ ERLEFLGDS++ ++ LY ++ + Sbjct: 8 EIEHVIGYRFRNKELLFTALTHTSYANENKKQSYERLEFLGDSVIDILVCTILYEQYQTL 67 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 +EG M+++++ + + L E+A++F LG+ + LG GE +S G ++SILAD VE+LI + Sbjct: 68 NEGTMAQIKSAVTSEDILFEIAKKFNLGKYILLGKGERRSRGSEKKSILADVVESLIAAI 127 Query: 124 FLDS--DIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +LDS +++ +E L ++ +D G + D KT+LQE Q + LP Y V G Sbjct: 128 YLDSNKNLKLIENLFSKIFKDYIDIFLTGKRIFDYKTKLQELTQDKFKQLPVYETTTVGG 187 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + F +++ GSS++ AE+ AA+ A +KL+ E Sbjct: 188 K-----FITTLKINN-KIYSKAKGSSKKDAEKLAAKIAYEKLKEE 226 >UniRef50_D2LJ11 Ribonuclease III n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJ11_RHOVA Length = 236 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 115/211 (54%), Gaps = 7/211 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSK----HNERLEFLGDSILSYVIANAL 56 + + L+ LGY F + LL +ALTH SA S+ NERLEFLGD +L IA L Sbjct: 3 IKKPRVEELEASLGYKFQERGLLAEALTHSSARSEKGGRDNERLEFLGDRVLGLSIAALL 62 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 + RFP+ E +++R LV T AE+A + ELG L + P E +SGG +++ ILAD V Sbjct: 63 FERFPKAREVELARHFNALVCKTTCAEVALKLELGPHLVMAPSEARSGGRKKDVILADAV 122 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EAL+G + +D E ++ ++ + S D KT LQE+ Q + LP Y Sbjct: 123 EALLGAISVDGGFAAAETVVHRHWEPFIA--SSEPPAPDAKTALQEFAQSQKRGLPDYHE 180 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 V+ G H FT+ +V GL P GTGSS Sbjct: 181 VERSGADHAPNFTVEVRVQGLK-PERGTGSS 210 >UniRef50_Q6PF88 Rnasen protein (Fragment) n=15 Tax=Coelomata RepID=Q6PF88_MOUSE Length = 942 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G F H LL +A T R+ H N+R+EFLGDSI+ V L+ F Sbjct: 675 LTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHF 734 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG ++ +R++LV T A++A E + E + K R LAD +E+ I Sbjct: 735 PDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITN-DKTKRPVALRTKTLADLLESFI 793 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYL 175 +++D D++ V + + RL E DPK++LQ+ +G+ +P Y Sbjct: 794 AALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYK 853 Query: 176 VVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +Q G +H + +T+ G G G S ++AE AA AL+K Sbjct: 854 TLQTVGPSHARTYTVAVYFKG-ERIGCGKGPSIQQAEMGAAMDALEK 899 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 63/128 (49%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ + LY+ FP ++EG ++ R +V+ LA LA++ EL + Sbjct: 531 NHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFM 590 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQK 154 G +A+ EALIG V+L+ ++ ++L D Sbjct: 591 LYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNYP 650 Query: 155 DPKTRLQE 162 +LQE Sbjct: 651 LHPLQLQE 658 Score = 42.1 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 17/27 (62%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA 32 + L + +GYTF + LLQ A+TH S Sbjct: 444 LMHLDKLIGYTFQDRCLLQLAMTHPSH 470 >UniRef50_D1C6L4 Ribonuclease III n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6L4_SPHTD Length = 259 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 114/210 (54%), Gaps = 12/210 (5%) Query: 11 RKLGYTFNHQELLQQALTHRSASSK-----------HNERLEFLGDSILSYVIANALYHR 59 ++LG F +LL+ ALTHRS ++ NERLEFLGDS+L + A LY R Sbjct: 24 QRLGIEFRDLDLLRLALTHRSYLNELGISQIEAVRDSNERLEFLGDSVLGMITAEFLYRR 83 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 FPR+ EG ++ R LVR TLA AR F L E L LG GE+ + G R+ ILA EA+ Sbjct: 84 FPRLPEGMLTAYRTALVRTETLARWARRFGLDELLYLGRGEITADGEIRDRILAGAFEAV 143 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 I ++LD I+ + + ++I ++ + K RLQE +Q P Y V V Sbjct: 144 IAAIYLDRGIRATRRFLRQLLIEDAEQIITEGQETNYKGRLQELVQEHMRVTPMYRTVAV 203 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G AHD+ FT+ V G VGTGSS+R Sbjct: 204 SGPAHDRVFTVEVVVGGEC-LGVGTGSSKR 232 >UniRef50_Q3SRB3 Ribonuclease 3 n=17 Tax=Rhizobiales RepID=RNC_NITWN Length = 266 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 9/209 (4%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASS------KHNERLEFLGDSILSYVIANAL 56 ++ ++++LG+TF LL A TH SA +RLEFLGD +L V+++ L Sbjct: 40 KAIMAAIEQRLGHTFADISLLTTAFTHVSALKSSRGRCDSYQRLEFLGDHVLGLVVSDML 99 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 Y FP+ DEG++S+ A LVR T ++A+ +L E ++LG +G R S+L D Sbjct: 100 YRAFPKADEGELSKRLADLVRKETCIDVAKSLDLQEGVKLGAVGAGAGARLRRSVLGDIC 159 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 EA+IG V+LD + + R+ + P +DPKT LQE+ QG+ LP P Y Sbjct: 160 EAVIGAVYLDGGYAAAAAFVERNWLERMRK--PVRPLRDPKTVLQEWAQGKGLPTPVYRE 217 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTG 205 V+ G HD F + ++ GL G G Sbjct: 218 VERTGPHHDPRFRVAVELPGLE-SSEGIG 245 >UniRef50_B3QS76 Ribonuclease III n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS76_CHLT3 Length = 269 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 8 RLQRKLGYTFNHQELLQQALTHRSASSKH---------NERLEFLGDSILSYVIANALYH 58 ++ G+ ++ + ALTHRSA + NERLEFLGD++L V+A LY Sbjct: 42 EIESLTGFPISNVIHYETALTHRSAIDLNVYSKKKFVSNERLEFLGDAVLDLVVAECLYT 101 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP DEG ++++R+ LV TLA AR+ LG L + G E+ LAD EA Sbjct: 102 RFPDYDEGKLTKLRSQLVNARTLASFARKIHLGSLLIVSEAAEAIGVRDSETTLADAFEA 161 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L+G ++LDSD ++ + +D + K+ L EY Q HL +PTY V+ Sbjct: 162 LVGAIYLDSDYLQTKRFLEKKILEGIDFRELSSTDNNFKSVLLEYAQAHHLEIPTYTVID 221 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G +H + FT+ + G G G S++ Sbjct: 222 EEGPSHKKVFTVAVYI-GDEMLGKGVGRSKK 251 >UniRef50_A3EQH6 Ribonuclease III n=3 Tax=Leptospirillum RepID=A3EQH6_9BACT Length = 377 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 36/257 (14%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASSK--------HNERLEFLGDSILSYVIAN 54 P L R LG F +++ALTHRSAS + + ERLEFLGD ++ +++ Sbjct: 15 PRAPEHLIRILGLPFKPTMRIEEALTHRSASHERGRKTPIPNYERLEFLGDRVIGLIVSE 74 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 L + +P EGD+ ++ + +V TLA +AR +LG + LG G SG S+LAD Sbjct: 75 YLLNTWPSASEGDIGQIFSGIVSTQTLASIARRMDLGSYMILGKGSHSSGDRENSSLLAD 134 Query: 115 TVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQ--------------------- 153 T E+L ++L+ ++T ++++ W+ L EI + Sbjct: 135 TFESLAAAIYLEYGLETCRQVLIPWFTQPLIEIVQKIENLREIRDSSSGPGSSVIATQPA 194 Query: 154 ------KDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 + K LQ++ Q + LP Y V++ G AH + F + + G G++ Sbjct: 195 PPRAGSLNYKLLLQKWCQSKAEELPVYQVLEEIGPAHQRRFRLGVFLKGKQ-LGEAEGTT 253 Query: 208 RRKAEQAAAEQALKKLE 224 +R A AA+ A ++++ Sbjct: 254 KRGASVHAAKNAWERIQ 270 >UniRef50_D1B5N5 Ribonuclease III n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5N5_THEAS Length = 226 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 15/210 (7%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHR 59 + LQ ++GY F +LL +ALTH S +++ NERLEFLGDS+L +A LY R Sbjct: 10 ALEELQDRVGYRFADTQLLIEALTHSSFANQAQLGYCNERLEFLGDSVLGLCVAEELYRR 69 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 P EG ++++++T V + LA R L LR+G G E ++AD +EAL Sbjct: 70 HPSEREGRLTKLKSTGVSSHNLARSGRVLGLDRVLRVGKA---IKGGPSEGMVADAMEAL 126 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 IG V+LD ++ ++ +DPK+ LQE Q +PLP+Y +V+V Sbjct: 127 IGAVYLDGGLEAARGIVSRHVS------LDSLSSQDPKSALQEMAQRLGIPLPSYRLVEV 180 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 RG H F + + G VG G SRR Sbjct: 181 RGPEHRATFVVQVWLKG-ELMGVGNGGSRR 209 >UniRef50_A9WMX9 Ribonuclease III n=3 Tax=Micrococcaceae RepID=A9WMX9_RENSM Length = 273 Score = 208 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 120/223 (53%), Gaps = 8/223 (3%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFP 61 L ++LG L+ ALTHRS + ++ NERLEFLGDS+L + +ALY P Sbjct: 23 AELLKRLGVDI-DAGTLRLALTHRSFAYENGGIPTNERLEFLGDSVLGLSVTDALYRDNP 81 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG++++ R+ +V LA +ARE +GE + LG GEL + G + SILADT+EAL G Sbjct: 82 GLAEGELAKRRSAVVSTRALAGVARELGVGEFILLGQGELLTDGKNKASILADTMEALFG 141 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 ++ +DI+T ++++ L + D KT +QE+ R L Y V G Sbjct: 142 AAYICNDIETARQMVMRLVGPLLADAGNFGAATDWKTNIQEHAANRQLGPVRYEVTGQ-G 200 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 H + + + G S G G S+++AEQ AA + +++ Sbjct: 201 PDHARTYQALLWIGGTSYQ-SGRGHSKKEAEQDAAANSWREIR 242 >UniRef50_D0WEA4 Ribonuclease III n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEA4_9ACTN Length = 312 Score = 208 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 ++ Q +G F+ ++L A+TH SA+ ERLEFLGDSIL ++AN +H + Sbjct: 11 LDLAQHVIGVAFDDIDILLAAITHPSATEGKPVKFSYERLEFLGDSILGAIVANEAFHAY 70 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P +DEG ++R++ LV G++L+++A + + + G E +G S L + EAL+ Sbjct: 71 PEIDEGGLTRIKVALVSGSSLSDVAAKLGFADIIVFGSSERGTGRRGLHSALENVYEALV 130 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 +FLD + + R+D I + ++PK+ LQE LQ + PTY +V+ + Sbjct: 131 AALFLDKGMDGARDFVRRTLIPRMD-IEMAREPENPKSALQEKLQEEGI-TPTYKLVETQ 188 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G HD+ F +GL+ G G +++++E AA+ AL ++ + Sbjct: 189 GPPHDRTFVSQV-FAGLTALAQGIGRTKKESESQAAKAALDMIDAD 233 >UniRef50_A9A9D4 Ribonuclease III n=4 Tax=Methanococcus maripaludis RepID=A9A9D4_METM6 Length = 229 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 121/228 (53%), Gaps = 11/228 (4%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALY 57 +L KL FN + ++A H S ++ NERLE+LGD++L +I+ L+ Sbjct: 3 NFEKLLSKLDIKFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLELIISEYLF 62 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE 117 + + EG+MS++RA V + L A++ + + LG GEL S G+ + +I++D E Sbjct: 63 KQ-ENLSEGEMSKLRAKYVCESALFTYAKKLKFDNYVLLGKGELISKGYNKPAIVSDVFE 121 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 A I ++LD + + +K + N ++E S + D KT+LQE+ + + Y+ + Sbjct: 122 AFIAAIYLDQGLNSAKKFVYNHILPIIEE-SSKELFIDYKTKLQEFPELINKS-INYVNL 179 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 + GE HD++F + + G G S+++AE AA+ AL KLE Sbjct: 180 EEAGEPHDKKFVVAVK-QDRKILGKGIGKSKKEAEMKAAKNALLKLEK 226 >UniRef50_B9L2H4 Ribonuclease III n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2H4_THERP Length = 252 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 88/228 (38%), Positives = 120/228 (52%), Gaps = 13/228 (5%) Query: 11 RKLGYTFNHQELLQQALTHRSASSKH-----------NERLEFLGDSILSYVIANALYHR 59 LG F +LL+QALTH S + NERLEFLGD++L +++ LY R Sbjct: 23 EALGIAFRRPDLLRQALTHLSYVYERSRSTQAAVEEANERLEFLGDAVLELLVSEFLYRR 82 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGF-RRESILADTVEA 118 FP EG+++ RA LVR TLA AR F L E L LG E+ G RE ILA EA Sbjct: 83 FPTASEGELTAYRAALVRTPTLARWARRFRLDEFLYLGRSEVPRPGRPVRERILAGAFEA 142 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++G ++LD I+ V + + + + + ++ K RLQE +Q R P Y + Sbjct: 143 VLGALYLDRGIRVVRRFLHRLLLEEAEGLIAIGQNENYKGRLQELIQDRLRITPVYRTIA 202 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 V G AH + FT + G VG G S+R AEQ AA +AL++L E Sbjct: 203 VTGPAHQRTFTAEVLI-GERPYGVGHGPSKRAAEQEAARRALERLRAE 249 >UniRef50_A5UJK3 Ribonuclease III (DsRNA-specific), Rnc n=2 Tax=Methanobrevibacter smithii RepID=A5UJK3_METS3 Length = 223 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 9/223 (4%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRV 63 L K + L A TH S +KH ERLEFLGDS+L+ +++ LY ++P Sbjct: 3 LLEKFNILPKDRHLYDVAFTHGSYGTKHGLDYTYERLEFLGDSVLNMIVSEYLYKQYPDY 62 Query: 64 DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGV 123 +EG ++++RA V L + E L + +++ + K SI AD E+ +G + Sbjct: 63 EEGKLTKLRANYVCQTALIYYSHELGLDKHIKIYGDDSKITENEVLSITADVFESFLGAI 122 Query: 124 FLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEA 183 FLD I+ + I +D + D K+ ++EY + + Y ++ G Sbjct: 123 FLDQGIEFAKDYISKIIFPYID--AKKVFFFDYKSVIKEYGDAQEVD-IEYKIIDECGVP 179 Query: 184 HDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 H++ F I + G E VG G ++++AEQAA++QA+KKL+++ Sbjct: 180 HNKTFIISILIDG-KEMGVGKGKNKKEAEQAASKQAMKKLKIQ 221 >UniRef50_A4GHU1 Ribonuclease III n=1 Tax=uncultured marine bacterium EB0_39H12 RepID=A4GHU1_9BACT Length = 218 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 125/216 (57%), Gaps = 4/216 (1%) Query: 11 RKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 L Y+F +EL Q ALTH+S SS +NERLEFLGD+IL+ ++ L++ + + EG ++R Sbjct: 7 TNLEYSFQDEELFQLALTHKSLSSHNNERLEFLGDAILNLYVSERLFNTYGNLKEGKLTR 66 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQ 130 +A++V L +A EL ++LG GE G SIL + +EALIG +FLDSD Sbjct: 67 FKASIVSRENLHRVAINLELSNHIKLGKGESLQG----NSILGNVLEALIGAIFLDSDYS 122 Query: 131 TVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTI 190 + ++ N ++ ++ ++ KDPK+ LQE +Q ++ LP Y + + + + +F + Sbjct: 123 ETKNVLDNIFKDDFLKLVEEEELKDPKSTLQELIQKQYQSLPIYSLNEQISDKKENQFEV 182 Query: 191 HCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 C V + G G++R+ AE AA L+ ++ + Sbjct: 183 TCSVVEGNLVTQGKGNTRKGAELNAASNMLELIQKQ 218 >UniRef50_A4WVP5 Ribonuclease 3 n=44 Tax=Rhodobacterales RepID=RNC_RHOS5 Length = 229 Score = 206 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 6/212 (2%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALYHRFP 61 + + ++G+ F + L +A+TH S SS N+RLEFLGD +L V+A AL Sbjct: 6 DLRAFESRIGHAFREPDRLLRAVTHASLSSATRPDNQRLEFLGDRVLGLVMAEALLAADK 65 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG ++ LVR T A +ARE LG+ L+LG E+ SGG R+E++L D +EA+I Sbjct: 66 AATEGQLAPRFNALVRKETCAAVAREVGLGDVLKLGRSEMMSGGRRKEALLGDALEAVIA 125 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 V+LD+ + +L+L + R+ ++ +D KT LQE+ Q R LP P Y V G Sbjct: 126 AVYLDAGFEAARRLVLRLWGERIAQVEAD--ARDAKTALQEWAQARGLPPPCYEAVDRSG 183 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 H FT+ ++ G ++R AEQ Sbjct: 184 PDHAPIFTVEVRLGNGETERSAAG-TKRVAEQ 214 >UniRef50_A1WMW1 Ribonuclease 3 n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=RNC_VEREI Length = 247 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 89/233 (38%), Positives = 124/233 (53%), Gaps = 21/233 (9%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 M P + LQ +L + F+ LL++A THRS S++HNERLEFLGDS+L+ +++ LY R Sbjct: 1 MRP-DLIALQERLQHVFSDPGLLERATTHRSFSAEHNERLEFLGDSVLNLAVSSLLYQRL 59 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLG--------------------PGE 100 + EG++SR+RA LVR +L +LA L + LRLG P E Sbjct: 60 SALPEGELSRVRANLVRQESLYQLALRLPLAQALRLGESLSGNRQRRSRRRCADELQPDE 119 Query: 101 LKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL 160 SGG + SILAD +EALIG V+LD+ + + L+ +Q +D KT L Sbjct: 120 AGSGGLQHPSILADALEALIGAVYLDAGYASAQALVQRLFQDVEISPRMQAAARDAKTAL 179 Query: 161 QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQ 213 QE+L R + P Y VV G AH F + C + L G+ SR+ EQ Sbjct: 180 QEWLASRKMKPPQYQVVARVGAAHCPTFEVACGIPALGLTERGSAGSRQAGEQ 232 >UniRef50_A9BIG2 Ribonuclease III n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIG2_PETMO Length = 253 Score = 206 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 11/211 (5%) Query: 21 ELLQQALTHRSASSKH---------NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRM 71 +L +AL H+S + NERLEFLGD++L VI+ LY+ + + EG+MS+ Sbjct: 33 SVLFEALCHKSYVFDNENIQRKLDSNERLEFLGDAVLELVISEFLYNNY-HLSEGEMSKA 91 Query: 72 RATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQT 131 RA + LAE+A + L + + L GE K GG ++SIL+DT+EAL ++L + Sbjct: 92 RAIIGSEIILAEVALKLRLDDFIFLSKGEDKQGGRTKKSILSDTMEALFACIYLSCGYEK 151 Query: 132 VEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIH 191 +K I+ + ++ G+ D KT+LQE Q + LP Y+++ G +H + + + Sbjct: 152 AKKYIIKNMKEYIENAVEGNIFLDYKTKLQELTQEKTKKLPEYVLLSASGPSHMKRYKVA 211 Query: 192 CQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 ++ +G G S++ AEQ AA+ A +K Sbjct: 212 VKLDD-EILGIGEGFSKKFAEQLAAKIACEK 241 >UniRef50_Q7KNF1 Drosha n=21 Tax=Neoptera RepID=Q7KNF1_DROME Length = 1327 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 16/228 (7%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + + +G F H LL +A T RS H N+RLEFLGD++L + + LY F Sbjct: 975 LTKFEDSIGIKFKHIRLLARAFTDRSIGFTHLTLGSNQRLEFLGDTVLQLICSEYLYRHF 1034 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG +S +R++LV T A + + + + + R AD +EA + Sbjct: 1035 PEHHEGHLSLLRSSLVNNRTQAVVCDDLGMPKYAVYANPKADLKTKDR----ADLLEAFL 1090 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL------QGRHLPLPTY 174 G +++D + E+ RL DPK++LQ+ G +P Y Sbjct: 1091 GALYVDKGLLYCEQFCHVCLFPRLQLFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPYY 1150 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 VV+ G + + + + +GSS ++AE AA+QAL+ Sbjct: 1151 KVVEASGPTNTRVYKVAVYFR-SKRLATSSGSSIQQAEMNAAKQALEN 1197 Score = 98.3 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 3/153 (1%) Query: 29 HRSASS-KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELARE 87 H + S+ HNERLEFLGD+++ ++ + L+ FP ++EG ++ RA +V+ LA LA++ Sbjct: 823 HETVSNITHNERLEFLGDAVVEFLSSIHLFFMFPELEEGGLATYRAAIVQNQHLALLAKK 882 Query: 88 FELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEI 147 +L E + G +A+ EAL+G + LD I+ +++ + + +++ Sbjct: 883 LQLEEFMLYAHGSDLCHELELRHAMANCFEALMGALLLDGGIKVADEVFTDALFRQDEKL 942 Query: 148 SPGDKQKDPKTRLQEYL-QGRHLPLPTYLVVQV 179 + P+ LQE G + +Y V++ Sbjct: 943 -LSIWKNLPEHPLQEQEPLGDRSCIDSYRVLKE 974 Score = 51.3 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKHN 37 ++ L+ +GY F ++ LLQ ALTH S ++ Sbjct: 743 LDLLEESIGYRFKNRYLLQLALTHPSY-KENY 773 >UniRef50_B4S3N5 Ribonuclease III n=2 Tax=Chlorobiaceae RepID=B4S3N5_PROA2 Length = 277 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 12/204 (5%) Query: 21 ELLQQALTHRSASSK-----------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 ++ + A THRS N+RLEFLGD++L +I+ LY FP DEG +S Sbjct: 56 DIYKTAFTHRSFVHDQHQGSSPAPFDSNQRLEFLGDAVLDLIISEHLYKLFPESDEGALS 115 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 R+ +V +LA+ A+ LG L +G + + E+ +AD EALIG ++LD + Sbjct: 116 STRSKIVNRKSLADFAQAIALGNQLIIGESADEEKIRKSEATMADAFEALIGAIYLDKGL 175 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 V++ I + T +D + + K+RL E+ Q L P Y +++ G H + FT Sbjct: 176 PAVQRFIDDHVMTIVDVPKLATIEHNHKSRLIEFAQANQLSHPQYTIIREEGAEHQKTFT 235 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQ 213 + G GT + ++ AEQ Sbjct: 236 VEVSFDGKPF-GTGTAARKKDAEQ 258 >UniRef50_Q8G7H1 Ribonuclease 3 n=20 Tax=Bifidobacteriaceae RepID=RNC_BIFLO Length = 242 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 118/229 (51%), Gaps = 9/229 (3%) Query: 3 PIVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALY 57 P N L LG T + +LL QALTHRS S +H ERLEFLGD++L V L+ Sbjct: 9 PTPANELLEALGTTLS-PDLLVQALTHRSFSHEHPGVANYERLEFLGDAVLELVSTETLF 67 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAR-EFELGECLRLGPGELKSGGFRRESILADTV 116 P + EG +++MRA V + L+ +A+ + ++G + LG GE + GG + SIL D V Sbjct: 68 TIHPDMTEGQLAKMRAKAVSEDALSAIAKTKLKVGPYILLGHGEAEQGGAEKNSILCDIV 127 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLV 176 E+LIG FL+ I K+I L E++ D KT L G P Y Sbjct: 128 ESLIGATFLEHGIDEARKVIHRLIDDTLAEVATEGPALDWKTSLTVKAHGLGKEEPVYH- 186 Query: 177 VQVRGEAHDQEFTIHCQVS-GLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 ++V G + Q FT + +G GSS+RKA+ AAAE K L+ Sbjct: 187 MEVSGPEYAQIFTARVSLGENGDIIGIGKGSSKRKAQLAAAEAGWKSLD 235 >UniRef50_A8QES5 RNase3 domain containing protein n=1 Tax=Brugia malayi RepID=A8QES5_BRUMA Length = 1329 Score = 205 bits (522), Expect = 9e-52, Method: Composition-based stats. Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 13/229 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 + L++ +G TF H +L +A T R+ HN+RLEFLGD++L + + LY F Sbjct: 1017 LTELEKNIGITFKHIRVLAKAFTRRNIGFNNLTLGHNQRLEFLGDTVLQLITTDYLYKHF 1076 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSG-GFRRESILADTVEAL 119 P EG +S +R LV T + + + + + L KSG R AD VEA Sbjct: 1077 PYHHEGHLSILRTCLVSNRTQSVICDDIGMTKYLVTPKVMQKSGMPVLRVKDKADLVEAF 1136 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL----QGRHLP--LPT 173 +G +++D + + RL DPK++LQ+ Q +P Sbjct: 1137 LGALYVDRGFDYCKVFCRICFFPRLKFFIIAQHWNDPKSQLQQCCLTLRQMDGGEPDIPE 1196 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 Y + V G + + + + VG G + + A+ AAE AL K Sbjct: 1197 YRTIAVEGPTNTRIYKVAVYFR-KKRLAVGCGHTMQLAQMRAAENALIK 1244 Score = 119 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 58/107 (54%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 HNERLEFLGD+++ ++ L++ F +DEG ++ R+T+V+ LA LA++ L E + Sbjct: 872 NHNERLEFLGDAVIEFITTIHLFYMFSELDEGGLATYRSTMVQNKNLALLAKKIGLDEFM 931 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQ 141 G +A+ EA++ ++LD+ I +++ + Sbjct: 932 LYAHGPDLCHESDLRHAMANAFEAMMAAIYLDAGIDECDRIFGHAMF 978 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 16/26 (61%) Query: 10 QRKLGYTFNHQELLQQALTHRSASSK 35 Q ++ Y F ++ LL+ ALTH S + Sbjct: 786 QERIHYVFKNRSLLELALTHPSYRTN 811 >UniRef50_B9ZJG8 Ribonuclease III n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJG8_9GAMM Length = 236 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 93/184 (50%), Positives = 117/184 (63%) Query: 24 QQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAE 83 +QALTHRSA ++NERLEFLGD++L VIA+ALY + P EGD++R+RA LV +LA Sbjct: 30 RQALTHRSAGGRNNERLEFLGDAVLGLVIADALYEQLPDAPEGDLTRLRAALVNRESLAA 89 Query: 84 LAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTR 143 LARE L L LG GE KSGG RR+SILAD VEALIG + ++ +Q L Y R Sbjct: 90 LARESGLEGTLNLGQGERKSGGQRRDSILADAVEALIGVTYREAGMQAARDFTLALYAER 149 Query: 144 LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVG 203 L + + KDPKTRLQE LQGR+ LP Y V++V G H + FT+ + G Sbjct: 150 LGNLPSAESLKDPKTRLQEQLQGRNAELPVYEVLEVVGPDHQRRFTVSVHLPTQGWGQQG 209 Query: 204 TGSS 207 GSS Sbjct: 210 EGSS 213 >UniRef50_B4RJT7 Ribonuclease 3 n=30 Tax=Neisseriaceae RepID=RNC_NEIG2 Length = 239 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 95/202 (47%), Positives = 128/202 (63%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEG 66 +Q+KLGY F LL++ALTHRS +KHNER EF+GDSIL+Y +A L+ FP++ EG Sbjct: 12 TAIQKKLGYAFRDMSLLRRALTHRSHHAKHNERFEFVGDSILNYTVARMLFDAFPKLTEG 71 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 ++SR+RA+LV LAE+A E +G+ L LG GELKSGGFRR SILAD +EA+ V D Sbjct: 72 ELSRLRASLVNEGVLAEMAAEMNVGDGLYLGAGELKSGGFRRPSILADAMEAMFAAVSFD 131 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 +D T EK++ + + R+ ++ KD KT LQE LQ R LP Y + + G A+D Sbjct: 132 ADFNTAEKVVRHLFAERVRRADFQNQAKDGKTALQEALQARRFALPKYRIEEQIGHANDS 191 Query: 187 EFTIHCQVSGLSEPVVGTGSSR 208 F I C + L G+SR Sbjct: 192 MFVISCDLGELGFVCRAKGTSR 213 >UniRef50_A9FII1 Ribonuclease III n=2 Tax=Deltaproteobacteria RepID=A9FII1_SORC5 Length = 275 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 10/212 (4%) Query: 7 NRLQRKLGYTFN-HQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYH 58 + L ++L L++ALTH S S++ N+RLEFLGD++L + L Sbjct: 4 SELLQRLDLGLEGDLPHLEEALTHPSFSNEQRGGRRVDNQRLEFLGDAVLGLCVTELLME 63 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 RFP EG++S MR+ LV + LA AR ELG LR+G G +G + ++LAD EA Sbjct: 64 RFPGAREGELSMMRSALVNTDALAAWARGIELGAALRVGRGAEVAGERDQTNVLADATEA 123 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQ-KDPKTRLQEYLQGRHLPLPTYLVV 177 L+ ++LD ++ L + L +++ G +D K+ LQE +Q R P Y ++ Sbjct: 124 LVAALYLDRGFESARALSRKIAASPLAQLASGSLLGRDAKSELQERVQARGAASPRYRLM 183 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G HD+ F + +V G G G S++ Sbjct: 184 GTEGPDHDRAFLVAVEVDG-QVIGTGRGRSKK 214 >UniRef50_A9T140 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T140_PHYPA Length = 1275 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 30/249 (12%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSA---SSKHNERLEFLGDSILSYVIANALY 57 ++ ++ L+ L Y F ++ LL +ALTH S S +RLEFLGD++L ++I Y Sbjct: 694 LSEAKVSELEILLNYKFQNKGLLVEALTHASCRRHSGDCYQRLEFLGDAVLDFLITKHFY 753 Query: 58 HRFPRV--DEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGE--------------- 100 + D G ++ +R+ V A +A L L + Sbjct: 754 ANSANLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARVDKYVHGSTTD 813 Query: 101 ---LKSGGFRRESILADTVEALIGGVFLDSDI--QTVEKLILNWYQTRLDEISPGDKQKD 155 G +L+D VE+L G VFLDS TV + + ++P + + Sbjct: 814 AQCHGWNGDSGPKVLSDLVESLAGAVFLDSGYKLDTVWNVFKQLLKPL---VTPATLRLE 870 Query: 156 PKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAA 215 P L E Q P Y + D T+ ++ + VG + A + A Sbjct: 871 PIRELWELCQTEKFGEPNYKKKREAMGDFD--MTVTVELKDETITGVGRKPDEKSARKVA 928 Query: 216 AEQALKKLE 224 A QAL+ L+ Sbjct: 929 AIQALETLK 937 Score = 89.5 bits (221), Expect = 8e-17, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 58/158 (36%), Gaps = 39/158 (24%) Query: 21 ELLQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGN 79 L+ +A+T E LE LGD+ L ++ L+ R+DEG++S+ R L+ Sbjct: 512 NLMLEAITTSKCQESFSLEGLELLGDAFLEVSVSERLFLLHNRLDEGELSKRRTNLICNK 571 Query: 80 TLAELAREFEL-------------------------GECLR---LGPGELKSGGFRRE-- 109 L L RE + +R P E + G RE Sbjct: 572 MLERLGRERGIMVSKSCRDTTRSTYKQFEIMINLVSENYIRDTQFSPKEWATPGRVRETQ 631 Query: 110 --------SILADTVEALIGGVFLDSDIQTVEKLILNW 139 +AD EALIG ++ ++ + ++ Sbjct: 632 CKLPPLQGKTIADVFEALIGAHYIHGGVEAAQAMMGWL 669 Score = 42.1 bits (98), Expect = 0.015, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 7/79 (8%) Query: 155 DPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQ----VSGLSEPVVGTG---SS 207 + ++ L P Y +V G +H F Q + G + + G Sbjct: 1192 EARSLLNAMCMKHRWGDPVYTLVSKGGVSHAPLFLYMVQTTIILRGRAFEIDAEGEVERD 1251 Query: 208 RRKAEQAAAEQALKKLELE 226 + A+ +AA + L+ L E Sbjct: 1252 IKGAKDSAAARLLEWLGEE 1270 >UniRef50_UPI000180B1D8 PREDICTED: similar to ribonuclease III, nuclear, partial n=1 Tax=Ciona intestinalis RepID=UPI000180B1D8 Length = 1224 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 13/229 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSA-----SSKHNERLEFLGDSILSYVIANALYHRF 60 + + + +G FNH LL +A T R+ + HN+RLEFLGDS+ + V + L+ + Sbjct: 963 LTKFEDSIGVKFNHIRLLAKAFTWRNVHENILTHGHNQRLEFLGDSVCNLVASAYLFKLY 1022 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSG--GFRRESILADTVEA 118 P EG ++ +RAT+V G T + +A E + E + + RE LAD +EA Sbjct: 1023 PTHHEGHLTLLRATVVNGRTQSLVATELGMPEYVICTLDNDSTERVPEWREKNLADLLEA 1082 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPT 173 + +F+D ++ V+ + + RL E + DPK+ LQ+ +G+ LPT Sbjct: 1083 FVAALFIDKGLKYVKTFMKICFFPRLKEFILTQEWNDPKSCLQQCCLTLRQEGKEPQLPT 1142 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 Y + G +H +++ + G E GTG S ++AE+ AA AL + Sbjct: 1143 YEISHQTGPSHSRKYVVTVHFKG-EEIGKGTGESIQRAERNAARTALNQ 1190 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 2/128 (1%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 +HNERLEFLGD+++ Y + L+ FP + EG ++ R LV LA LA +L E + Sbjct: 819 EHNERLEFLGDAVVGYFTSVHLFLLFPDLSEGALTTFRTVLVNNQHLALLAERLQLDEFM 878 Query: 95 RLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQK 154 G +A+ EAL+G +++++ ++ ++L + Sbjct: 879 LYAHGPDLCRKADLRHAMANCFEALMGAIYMEAGLERAQRLFGEFLWETEALQRVWRSL- 937 Query: 155 DPKTRLQE 162 P +LQE Sbjct: 938 -PLHQLQE 944 >UniRef50_C8NZK7 Ribonuclease III n=4 Tax=Erysipelotrichaceae RepID=C8NZK7_ERYRH Length = 226 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 118/211 (55%), Gaps = 8/211 (3%) Query: 19 HQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMR 72 +++L+ A H S ++ NERLEF+GD++L ++ L+ +EGDM+ R Sbjct: 16 NKDLINNAFIHSSYVNEAEELLEDNERLEFMGDAVLQICVSERLFKHQDHFNEGDMTLYR 75 Query: 73 ATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 A LV + LA+ + + +L + L LG GE K+GG R SI+AD E+ IG ++LDS I +V Sbjct: 76 AKLVCEDALAQYSLKLKLNDYLMLGMGEEKNGGRVRVSIIADLFESFIGALYLDSGIDSV 135 Query: 133 EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHC 192 +++ + +E+ D KT+LQEY+Q +Y V+ V G ++ EF + Sbjct: 136 NRVLDSVMNDAFNEL-ESLSITDYKTKLQEYIQSDSRKSVSYEVINVVGPSNAPEFEVVV 194 Query: 193 QVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 ++ G G S++KAEQ AA+ A +KL Sbjct: 195 KL-DELIFGQGKGLSKKKAEQMAAKDAFEKL 224 >UniRef50_C1F8X7 Ribonuclease III n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8X7_ACIC5 Length = 302 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 47/266 (17%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK----------------------------HNE 38 L+ LGYTF + LL +ALTH S + + NE Sbjct: 18 AELEAALGYTFQDKGLLARALTHSSLAYEQTAQTATPAAARATGKSSEARTRRSPLEDNE 77 Query: 39 RLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGP 98 +LEFLGD++L ++A ALY P + EG ++R+R+ LV + ++A LG LR+G Sbjct: 78 QLEFLGDAVLGLIVAEALYRAHPEMSEGQLTRLRSALVSRKHMGQVAHRLHLGTYLRMGR 137 Query: 99 GELKSGGFRRESILADTVEALIGGVFLDS---------DIQTVEKLILNW-----YQTRL 144 GE +SGG ++ ++LA+ EALI V+LD+ + +I + L Sbjct: 138 GEERSGGRKKPALLANAAEALIAAVYLDAAGITGPCETALTAARAIIERHVIEPSLPSLL 197 Query: 145 DEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL-----SE 199 E S G D K+ LQE+LQ H P Y+V G H + F + ++ G + Sbjct: 198 QEASRGTSIGDHKSALQEFLQSEHRGQPEYVVTGQSGPDHHKRFLVEVRLPGKAGAPGTA 257 Query: 200 PVVGTGSSRRKAEQAAAEQALKKLEL 225 G G +++ AEQ AA +AL+KL+ Sbjct: 258 LARGIGGTKKHAEQEAARRALRKLQA 283 >UniRef50_Q2RJX2 Ribonuclease 3 n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RNC_MOOTA Length = 233 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 7/190 (3%) Query: 23 LQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVR 77 L ALTH + + +H N+RLEFLGD++L V+A LY FP++ EGD++RMRA +V Sbjct: 26 LDLALTHPTYAFEHHLPGDNQRLEFLGDAVLGLVVATYLYQHFPQLPEGDLTRMRAAVVC 85 Query: 78 GNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLIL 137 +L ++AR +G+ LRLG GE SGG R S LAD +EA+IG V+L + +L Sbjct: 86 EASLVKVARRLRVGDLLRLGQGEEHSGGRERPSNLADAMEAIIGSVYLSGGYELARDFVL 145 Query: 138 NWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGL 197 + T EI D K+ LQE++Q + Y +++ G H + + + Sbjct: 146 QIF-TPALEILSDTSFIDSKSALQEFVQSQGTENVVYKILEEWGPDHAKGYKAGVFLKN- 203 Query: 198 SEPVVGTGSS 207 G G S Sbjct: 204 RLLATGLGHS 213 >UniRef50_D0LAL1 Ribonuclease III n=11 Tax=Actinomycetales RepID=D0LAL1_GORB4 Length = 262 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 15/212 (7%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRF 60 + + +G ++LL ALTHRS + ++ NERLEFLGDS+L VI LY + Sbjct: 14 LTAVDTTIG-----EQLLTLALTHRSYAYENGGLPTNERLEFLGDSVLGVVITERLYLSY 68 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFE---LGECLRLGPGELKSGGFRRESILADTVE 117 P EG+++++RA++V + LA++AR LG L LG GE +GG ++SILAD +E Sbjct: 69 PDRPEGELAKIRASVVNMHALADVARSLGPGGLGRHLYLGRGEEMTGGRDKDSILADGLE 128 Query: 118 ALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVV 177 +L G VF++ + T +++IL + +D D KT LQE + L P Y + Sbjct: 129 SLFGAVFIEHGLATSKRVILRLFDDVIDRAGTLGAGLDWKTSLQELSAEQGLGPPQYQ-I 187 Query: 178 QVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 G H++EFT V+G S G G +++ Sbjct: 188 SSTGPDHNKEFTAVAVVAGES-LGNGVGRTKK 218 >UniRef50_C7MDJ8 RNAse III n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDJ8_BRAFD Length = 250 Score = 202 bits (515), Expect = 6e-51, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 110/209 (52%), Gaps = 8/209 (3%) Query: 18 NHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMR 72 LL+ +LTHRS S + HNERLEFLGD++L + LY P + EGD++R R Sbjct: 31 QDSGLLELSLTHRSYSYENDGLPHNERLEFLGDAVLQLAVTEHLYAAHPTLPEGDLARRR 90 Query: 73 ATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 A V LA +A + +LG +RLG GE +GG + SILADT EA+IG V L Sbjct: 91 AATVSTRALAVIASKLDLGAYVRLGRGEDLTGGRAKASILADTTEAVIGAVHLALGQDVS 150 Query: 133 EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHC 192 + +L+ + LD + D K+RLQE TY + G H + +T Sbjct: 151 RRFVLDLLRPLLDSDEFLEAGYDFKSRLQEIAAAEG-ENVTYAL-SESGLEHQKVYTATV 208 Query: 193 QVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 V G+ G G+S++ AE AAA+ A++ Sbjct: 209 TVPGI-VTARGDGASKKDAELAAAQNAVR 236 >UniRef50_O01326 Ribonuclease 3 n=3 Tax=Caenorhabditis RepID=RNC_CAEEL Length = 1086 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 15/230 (6%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRF 60 + L+ +LG FN+ LL +A T R+ + HN+RLE+LGDS+L ++++ LY RF Sbjct: 833 FHALEERLGIQFNNIRLLAKAFTRRNIPNNDLTKGHNQRLEWLGDSVLQLIVSDFLYRRF 892 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 P EG MS +R +LV T A + + E + P + + AD VEA I Sbjct: 893 PYHHEGHMSLLRTSLVSNQTQAVVCDDLGFTEFVIKAPYKTPE---LKLKDKADLVEAFI 949 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLP------LPTY 174 G +++D I+ I + RL +K D K+ LQ++ P +P Y Sbjct: 950 GALYVDRGIEHCRAFIRIVFCPRLKHFIESEKWNDAKSHLQQWCLAMRDPSSSEPDMPEY 1009 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 V+ + G +++ F I G S+ KAE AE AL LE Sbjct: 1010 RVLGIEGPTNNRIFKIAVYYKGKR-LASAAESNVHKAELRVAELALANLE 1058 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 52/192 (27%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------------------------------ 35 ++ + + Y FN + +++ AL H S S Sbjct: 607 LDVFEEVIEYKFNDRRVIELALMHSSFKSHYGTPIDHVKNMITNCGYRRKYGAEDKREKK 666 Query: 36 ----------------------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRA 73 HNERLE+LGD+++ ++++ LY EG ++ R Sbjct: 667 RVAGIMSLFNIMKGTSGGEPILHNERLEYLGDAVVELIVSHHLYFMLTHHFEGGLATYRT 726 Query: 74 TLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVE 133 LV+ LA LA+ + E L+ G + LA+ EA++ ++LD + + Sbjct: 727 ALVQNRNLATLAKNCRIDEMLQYSHGADLINVAEFKHALANAFEAVMAAIYLDGGLAPCD 786 Query: 134 KLILNWYQTRLD 145 + Sbjct: 787 VIFSKAMYGHQP 798 >UniRef50_Q9VCU9 Endoribonuclease Dcr-1 n=61 Tax=Coelomata RepID=DCR1_DROME Length = 2249 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 95/256 (37%), Gaps = 41/256 (16%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61 + LGY F + L QA+TH S + + +RLEFLGD++L Y+I LY Sbjct: 1993 FEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPR 2052 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS------------------ 103 + G ++ +R+ LV A LA + R L Sbjct: 2053 QHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHCISE 2112 Query: 104 -------------GGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPG 150 L D E++ G +FLDS++ ++ + Y + Sbjct: 2113 EYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMS--LDVVWHVYSNMMSPEIEQ 2170 Query: 151 DKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 PK+ ++E L+ L T + A + + V G G + R Sbjct: 2171 FSNSVPKSPIRELLE---LEPETAKFGKPEKLADGRRVRVTVDVFCKG-TFRGIGRNYRI 2226 Query: 211 AEQAAAEQALKKLELE 226 A+ AA+ AL++L+ + Sbjct: 2227 AKCTAAKCALRQLKKQ 2242 Score = 79.5 bits (195), Expect = 9e-14, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 11 RKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 +G+ ++ QALT +A+ N ERLE +GDS L Y I LY + V EG +S Sbjct: 1714 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1773 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSG 104 +R+ V L L R LGE + E Sbjct: 1774 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDN 1808 >UniRef50_B2UPF8 Ribonuclease III n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UPF8_AKKM8 Length = 231 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 109/209 (52%), Gaps = 6/209 (2%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANALYHRFP 61 L+ KLGY FN+ +LL QALTH S SK ERLEFLGD+IL + LYH P Sbjct: 4 TALEDKLGYRFNNPDLLVQALTHPSTDSKPETRRAYERLEFLGDAILQLAVTQYLYHHMP 63 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + EG+++++RA V L + L + + LG GE ++GG + SI+A+T E++ G Sbjct: 64 QSPEGELTQLRARTVSRANLGKYGFILGLDKHIALGKGEERAGGRGKNSIIANTFESVFG 123 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 + LDSD +T + + L LD + K+ +PK LQ LQ P+Y + Sbjct: 124 AMSLDSDYETAKAVALRVLHEALDSAASHPKEINPKGELQAILQDILPETPSYETEEKGP 183 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRK 210 + F G + G+G+S+RK Sbjct: 184 RDAENRFESRVFWHGHAI-GAGSGASKRK 211 >UniRef50_B8LN71 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LN71_PICSI Length = 685 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 34/253 (13%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALY 57 + I I+ L+R LGY F+++ LL +A H S + +RLEFLGD++L Y+I + LY Sbjct: 217 IKCIDIDELERLLGYNFSYKGLLLEAFAHPSFNEHNGGCYQRLEFLGDAVLDYIITSYLY 276 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGF----------- 106 +P + G ++ MR+ V + A +A L L L S Sbjct: 277 SVYPDMKPGYLTDMRSMTVNNESFACVAVRHGLYMYLIQKSDSLSSAVTKYVDFMKALFT 336 Query: 107 -----------RRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKD 155 + +L D VE+ G + +D+ ++P Sbjct: 337 ADRDSCDEPEPKCPKVLGDIVESFAGALVIDTGFDLDCVW-KLMLNILQPIVTPETLCLQ 395 Query: 156 PKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEP----VVGTGSSRRKA 211 P L E Q +L L + G + + +VSG GT +S + A Sbjct: 396 PVRELSEVCQHHNLTLDYVKASKGNGNG----YLVEAKVSGKKVSGSVGGTGTRTSIKDA 451 Query: 212 EQAAAEQALKKLE 224 ++ A++ AL KL+ Sbjct: 452 KKVASKDALLKLK 464 Score = 82.2 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 48/180 (26%) Query: 8 RLQRKLGYTFNHQELL-----QQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFP 61 L+ L +F L+ +A+T ERLE LGD+ L Y ++ L+ + Sbjct: 13 ELKELLTASFPEGSLVTASRVLEAITTERCMEGFSLERLEVLGDAFLKYAVSRRLFLVYD 72 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLR---LGPGELKSGGFRRESI------- 111 ++DEG +++ R+ ++ + L + A+ +R P + + G +++ Sbjct: 73 KLDEGQLTKKRSNAIKNSNLYKRAKGKGFPAYIRDEYFDPKQYFALGRPCKNVCTPELVH 132 Query: 112 --------------------------------LADTVEALIGGVFLDSDIQTVEKLILNW 139 +AD VEALIG +DS + Sbjct: 133 MIHYFEGDNTMTDTDFTSVKCTKRHHWLHMKTIADVVEALIGAYLVDSGFGAALAFLKWI 192 Score = 46.3 bits (109), Expect = 7e-04, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 5/99 (5%) Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD 185 D K W D K+ L E+ Q + +P+++ Q G H Sbjct: 579 DHHYDITNKTEYQWPSASWDT-DIDQFLGSAKSSLNEFCQKKSWEVPSWVCYQEEGMPHQ 637 Query: 186 QEFT-IHCQVSGLSEPVVGTG---SSRRKAEQAAAEQAL 220 + FT + + + G ++R A ++A+ AL Sbjct: 638 KSFTYMAVLRLPGNISIECLGEPMKNKRLAMESASRGAL 676 >UniRef50_C7RGT7 Ribonuclease III n=4 Tax=Anaerococcus RepID=C7RGT7_ANAPD Length = 239 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 8/209 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59 I + K+GYTFN ++L+ A TH S +++ NERLEFLGDSIL +++ L+ Sbjct: 11 IEEFENKIGYTFNDKDLIDVAFTHSSYTNEVKGKKKSNERLEFLGDSILDMIVSEVLFKH 70 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119 + EG +++ R+ LV ++ A+ +FE+ L G GE + GG ++ + ADT EA+ Sbjct: 71 YSMKPEGWLTKTRSRLVCTSSFAKACEKFEMTTFLNFGNGERQGGGELKKHVKADTFEAV 130 Query: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDK-QKDPKTRLQEYLQGRHLPLPTYLVVQ 178 ++LDS + K + Y+ EI D D KT+LQEY + + Y++V+ Sbjct: 131 CAAIYLDSSYDNLFKFLKENYKEEALEIINDDSIFNDYKTKLQEYHNAKDRKILKYVLVK 190 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 G H++ FT+ ++ G G G + Sbjct: 191 EEGPEHEKTFTMAVKL-GNKVLAHGVGKN 218 >UniRef50_C5CGL9 Ribonuclease III n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGL9_KOSOT Length = 249 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 117/214 (54%), Gaps = 11/214 (5%) Query: 19 HQELLQQALTHRSASSK---------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 E + +AL H S +++ NERLEFLGD++L+ +A+ LY + VDEG MS Sbjct: 20 DTEWIFKALCHSSYANEVVRKGMNVESNERLEFLGDAVLALSLADLLYREY-DVDEGVMS 78 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 + RA + LAE+AR +GE L LG GELK+GG R+SILAD EA++G ++L Sbjct: 79 KTRAVVASEKVLAEVARNMNIGEYLLLGKGELKTGGRGRDSILADAFEAILGALYLSEGF 138 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 + + +++ + D KT LQE QG P Y ++ G ++ F Sbjct: 139 EIARNFVKEKLGIYIEKALNKELVLDYKTTLQELTQGNLGVRPEYSYIENIGTPQNKLFH 198 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + +V+G + VG G +++ AEQ AA +A +KL Sbjct: 199 VEVRVNGKA-LAVGYGKTKKAAEQDAARKAYEKL 231 >UniRef50_C5NVE5 Ribonuclease III n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVE5_9BACL Length = 237 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 129/228 (56%), Gaps = 9/228 (3%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK-------HNERLEFLGDSILSYVIANALYH 58 +N L + G+ E + + +H S +++ + ERLEFLGD+++ + L+ Sbjct: 10 LNNLNEEYGFNLKFSENFKNSFSHSSYTNEKRIAKHLNYERLEFLGDAVVELTTSEFLFK 69 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 +F + EG+++++RA++V TL + A + L +C+ LG GE K GG R ++LAD E+ Sbjct: 70 KFSELPEGELTKLRASIVCEKTLVKYALQLSLDKCIYLGKGEEKMGGRSRAALLADIFES 129 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 G ++L+S+++ V+ + N T + ++ D KT LQEY+ L Y+V+ Sbjct: 130 FTGAMYLESNLEVVKTFLNNTLFTEVQDL-EYHSFVDYKTILQEYISKIKLGEIEYVVLD 188 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 G +H + FT + G + GT ++++++EQ +A+QAL+KLE + Sbjct: 189 SSGPSHSKTFTSAVLI-GRKQYGSGTATTKKESEQLSAKQALEKLEYK 235 >UniRef50_D2XYX5 Dicer-1 n=2 Tax=Penaeidae RepID=D2XYX5_PENJP Length = 2482 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 97/254 (38%), Gaps = 46/254 (18%) Query: 9 LQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFPRVD 64 + K+GYTF + L QA TH S + +RLEFLGD++L Y+I LY + Sbjct: 2229 FEEKIGYTFQDRSYLLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHS 2288 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPG------------------------- 99 G ++ +R+ LV A LA +++ + R Sbjct: 2289 PGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDRVIRDFVKMQEENGHKINEEYY 2348 Query: 100 ------ELKSGGFRRESILADTVEALIGGVFLDSD--IQTVEKLILNWYQTRLDEISPGD 151 + L D E++ G +FLDS + V + +++ S Sbjct: 2349 FMEEDECEAAEDIEVPKALGDVFESVAGAIFLDSGSSLDAVWSVYYTMMCREIEQFS--- 2405 Query: 152 KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKA 211 PK+ ++E L+ P D + + ++ G G G + R A Sbjct: 2406 -GVVPKSPIRELLEME----PETAKFGKPERLVDGKVRVSVEIFGKG-SFSGVGRNYRIA 2459 Query: 212 EQAAAEQALKKLEL 225 + AA++AL+ L+ Sbjct: 2460 KSTAAKRALRHLKK 2473 Score = 91.0 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 66/181 (36%), Gaps = 10/181 (5%) Query: 11 RKLGYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMS 69 L + ++ QALT +A+ N ERLE +GDS L Y I LY +P+ EG +S Sbjct: 1962 DLLNHPGPSPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLS 2021 Query: 70 RMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESIL-ADTVEALIGGVFLDSD 128 +R+ V L L + LGEC+ E + + EALI DS Sbjct: 2022 YLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALI-----DSG 2076 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEF 188 + N D+ + E ++ T ++ + F Sbjct: 2077 VPAGH---WNMADLPGLHDLASDEIRRLVQERSEQIKRSKNEQATSELMATQNPHDLPIF 2133 Query: 189 T 189 Sbjct: 2134 I 2134 >UniRef50_B7P5Y8 Dicer-1, putative n=1 Tax=Ixodes scapularis RepID=B7P5Y8_IXOSC Length = 2050 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 42/253 (16%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFPR 62 + + ++GY F + L QA TH S + +RLEFLGD++L Y+I LY R Sbjct: 1795 DAFEARIGYRFRDRAYLLQAFTHASYHYNRLTDCYQRLEFLGDAVLDYLITRHLYDDPQR 1854 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECL------------RLGPGELKSGGFR--- 107 G ++ +R+ LV A LA +++ R + S GFR Sbjct: 1855 HSPGTLTDLRSALVNNTFFASLAVKYDFHRYFKNVSPGLFAVIQRFVETKCHSDGFRYHE 1914 Query: 108 ----------------RESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGD 151 L D E++ G +FLDS++ + Y + Sbjct: 1915 KYYLEEEECEEAEEVEVPKALGDIFESVAGAIFLDSNMS--LDTVWRVYYAMMKPEIEYF 1972 Query: 152 KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKA 211 PK+ ++E L+ P + + + I +V G VG G ++R A Sbjct: 1973 STHVPKSPIRELLELE----PQTAKFERAEMTLNGKVRIRVEVFGKGR-FVGVGRNKRIA 2027 Query: 212 EQAAAEQALKKLE 224 + AA++AL+ L+ Sbjct: 2028 KCTAAKRALRALK 2040 Score = 77.1 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Query: 20 QELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 +L QALT +A+ N ERLE +GDS L Y + LY P V EG +S +R+ + Sbjct: 1550 PSILLQALTMSNANDGINLERLETVGDSFLKYAVTAHLYCTHPSVHEGKLSHLRSRQISN 1609 Query: 79 NTLAELAREFELGECLRLGPGELKSGGFRRESILADTVE-ALI 120 L L R LG + E ++ +E ALI Sbjct: 1610 LNLYRLGRARRLGGLMVATKFEPSDNWLPPGYVVPPGLERALI 1652 >UniRef50_A0PQ48 Ribonuclease III Rnc n=2 Tax=Mycobacterium RepID=A0PQ48_MYCUA Length = 243 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 10/195 (5%) Query: 21 ELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75 EL+ ALTHRS + ++ NERLEFLGD++L I + L+HR P EGD++++RA++ Sbjct: 19 ELVTLALTHRSYAYENGGLPTNERLEFLGDAVLGLTITDELFHRHPERSEGDLAKLRASV 78 Query: 76 VRGNTLAELAR---EFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTV 132 V LA++AR + LG + LG GE +GG + SILAD +E+L+G ++L ++ Sbjct: 79 VNTQALADVARHLSDHGLGAHMLLGRGEANTGGADKSSILADGMESLLGAIYLHHGMEVA 138 Query: 133 EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHC 192 + IL + LD D KT LQE R L P+Y V G H +EFT Sbjct: 139 REAILRIFGPLLDAAPTLGAGLDWKTSLQELTASRSLGAPSYAVTS-TGPDHHKEFTAVV 197 Query: 193 QVSGLSEPVVGTGSS 207 V+ +E G G S Sbjct: 198 VVNN-TEYGSGVGRS 211 >UniRef50_B1XKP4 Ribonuclease III n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XKP4_SYNP2 Length = 258 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 11/197 (5%) Query: 17 FNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 F LL QALTHRS +++ NERLEFLGD++L +++ LY R+P EG++SR Sbjct: 7 FQRSPLLLQALTHRSFANEQPETIQDNERLEFLGDAVLKFIMGKLLYERYPDFQEGELSR 66 Query: 71 MRATLVRGNT-LAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDI 129 +RA+L LAE A+ L + LRLG G K G + IL++T EA++G FLD+ I Sbjct: 67 LRASLENNRHQLAEFAQVLGLDQILRLGKGAEKEGARQNPEILSNTFEAVVGAYFLDAGI 126 Query: 130 QTVEKLILNWYQTRLDEI---SPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ 186 + + D + ++ K +LQE+ H +P Y + G H + Sbjct: 127 EAAIAFVETLVIPVADRLVQQPSDPLAQNFKGQLQEWALANHGEIPKYKTLNESGADHAK 186 Query: 187 EFTIHCQVSGLSEPVVG 203 FT+ + G G Sbjct: 187 TFTVAVYLQGQEW-GRG 202 >UniRef50_B1Q0G4 Dicer-1 CG4792-PA-like protein n=1 Tax=Apis mellifera RepID=B1Q0G4_APIME Length = 1946 Score = 199 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 92/255 (36%), Gaps = 45/255 (17%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFPR 62 L++ +GY F+ L QA TH S + +RLEFLGD++L Y+I LY + Sbjct: 1696 EELEKNIGYKFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDTRQ 1755 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPG----------------------- 99 G ++ +R+ LV A LA + R Sbjct: 1756 HSPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSIGEE 1815 Query: 100 --------ELKSGGFRRESILADTVEALIGGVFLDSDI--QTVEKLILNWYQTRLDEISP 149 ++ L D E+L G ++L S + V + + +++ S Sbjct: 1816 YYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLGSGMSLDAVWSVYYAIMKNEIEQFST 1875 Query: 150 GDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 + K P L E T + A + + V G G G + R Sbjct: 1876 -NVPKSPIRELLEL------EPETAKFGKPEKLADGRRVRVTVDVFGKG-SFKGIGRNYR 1927 Query: 210 KAEQAAAEQALKKLE 224 A+ AA+ ALKKL+ Sbjct: 1928 IAKCTAAKCALKKLK 1942 Score = 77.9 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 20 QELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 L+ QALT +A+ N ERLE +GDS L Y I LY + + EG +S +R+ V Sbjct: 1417 PSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSN 1476 Query: 79 NTLAELAREFELGECLRLGPGELKSG 104 L L R+ LGE + E Sbjct: 1477 LNLYRLGRQKMLGESMIATKFEPHDN 1502 >UniRef50_Q8Z023 Ribonuclease 3 n=10 Tax=Cyanobacteria RepID=RNC_ANASP Length = 228 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 10/203 (4%) Query: 17 FNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSR 70 F +LL++ALTHRS ++ HNERLEFLGD+IL+++ LY P E +++R Sbjct: 7 FRDDKLLRRALTHRSYVNENPEEGEHNERLEFLGDAILNFLSGEYLYRSHPDRGEDELTR 66 Query: 71 MRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD--SD 128 R+ LV LA+ A E L +RLG G ++ GG++ ++L+ T EA+IG +LD S+ Sbjct: 67 RRSALVDEKQLAKFAIEVGLDFKMRLGKGAIRDGGYQNPNLLSSTFEAVIGAYYLDNNSN 126 Query: 129 IQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGR-HLPLPTYLVVQVRGEAHDQE 187 I+ V +I +++ ++I D K R QE++Q P YL Q+ G +H E Sbjct: 127 IEAVRAIIEPLFESVPEQIVVVRSNVDSKNRFQEWVQRNIGPTPPKYLTEQIGGFSHAPE 186 Query: 188 FTIHCQVSGLSEPVVGTGSSRRK 210 F V G E G G +++ Sbjct: 187 FKATVLV-GEKEYGEGIGKNKKD 208 >UniRef50_Q1GTU3 Ribonuclease 3 n=1 Tax=Sphingopyxis alaskensis RepID=RNC_SPHAL Length = 226 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 96/208 (46%), Gaps = 3/208 (1%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61 +P+ L +G + L ALTH S +RLEFLGD +L V+A+ LY RFP Sbjct: 3 DPLNTEALADIIGCIPDDLTLYDLALTHGSTGRADYQRLEFLGDRVLGLVLASELYTRFP 62 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG+MS L G T A +A+ +L +R G GG ++I AD +EALIG Sbjct: 63 AASEGEMSSRLHVLASGATCAAIAQRLDLPALIRFGAQARSDGGRHSDNIAADAIEALIG 122 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +FL+ I+ IL + +D K PK LQE+ R P Y +V G Sbjct: 123 ALFLERGIEAARTFILAQWGALIDGQQAAP--KHPKAALQEWALARGRRPPEYEIVSREG 180 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRR 209 H F I + G G+S++ Sbjct: 181 PDHAPRFRIAVSI-GKLARAEAQGASKQ 207 >UniRef50_B2RFM9 Drosha protein n=1 Tax=Oikopleura dioica RepID=B2RFM9_OIKDI Length = 1096 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 13/226 (5%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSA-----SSKHNERLEFLGDSILSYVIANALYHRFP 61 L+ LG F + LL +ALT ++ + HN+RLEFLGD+I +++ A L+ FP Sbjct: 770 AELEELLGVKFKNIRLLAKALTLKNVKYNDITKGHNQRLEFLGDAICNFLAAEYLFKHFP 829 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG ++ +R T+V T A +A++ L + + ++ ILAD +E+ IG Sbjct: 830 LHHEGHLTLLRCTMVGAPTQALVAQQIGLDKFVISRQSLSHDKMGWKQKILADLMESFIG 889 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPTYLV 176 +F+D I V+ + + RL DPK+ LQ+ + LP Y Sbjct: 890 ALFIDRGIIAVDVFMKVAFYPRLKHFIMSQVWNDPKSCLQQCCLTLRPEEGTPDLPEYRT 949 Query: 177 VQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 + + + G G G S + AE+ AA +AL+K Sbjct: 950 TTSN--SSKMRYRVEVFFRG-ERIGEGHGPSIQLAEKFAARKALEK 992 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 79/217 (36%), Gaps = 60/217 (27%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTH--------------------------------RS 31 + LQ LGY F + + +A+TH S Sbjct: 536 HSLESLQTILGYQFKNLSWITRAMTHPSAVYNYGENPDHVRNSTTNCGIRKPIYGEEGPS 595 Query: 32 ASSK-------------------------HN-ERLEFLGDSILSYVIANALYHRFPRVDE 65 + + ER EFLGD++L +V++ +++H FP + E Sbjct: 596 RPYERKRGIVTLIKVMALLGTSEPKESPINYLERPEFLGDAVLGFVVSVSIFHLFPNLGE 655 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G +S +R LV LA LA++ L + + + + LA+ EA++G +++ Sbjct: 656 GALSMLRCALVCNVHLAALAQKLTLEDYFVYIHSQDLAKREDLNNALANCFEAVLGAIYM 715 Query: 126 DSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQE 162 D ++ V +L+ P LQ+ Sbjct: 716 DGGLEPVRQLLARVLFDDKALQRVWLDF--PAHPLQQ 750 >UniRef50_Q9UPY3 Endoribonuclease Dicer n=42 Tax=Euteleostomi RepID=DICER_HUMAN Length = 1922 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 47/258 (18%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61 ++K+ Y F ++ L QA TH S + +RLEFLGD+IL Y+I LY Sbjct: 1666 FENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1725 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGE--------------------L 101 + G ++ +R+ LV A LA +++ + + E + Sbjct: 1726 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGM 1785 Query: 102 KSGGFRR------------ESILADTVEALIGGVFLDSDI--QTVEKLILNWYQTRLDEI 147 S R + D E+L G +++DS + +TV ++ + +++ Sbjct: 1786 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKF 1845 Query: 148 SPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 S + + P L E P +D + + +V G + G G S Sbjct: 1846 SA-NVPRSPVRELLEM-------EPETAKFSPAERTYDGKVRVTVEVVGKGK-FKGVGRS 1896 Query: 208 RRKAEQAAAEQALKKLEL 225 R A+ AAA +AL+ L+ Sbjct: 1897 YRIAKSAAARRALRSLKA 1914 Score = 86.8 bits (214), Expect = 5e-16, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 5/90 (5%) Query: 13 LGYTFN----HQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGD 67 +GY+ + L+ QALT +AS N ERLE LGDS L + I L+ +P EG Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGR 1342 Query: 68 MSRMRATLVRGNTLAELAREFELGECLRLG 97 +S MR+ V L L ++ L + + Sbjct: 1343 LSYMRSKKVSNCNLYRLGKKKGLPSRMVVS 1372 >UniRef50_B0W7S3 Endoribonuclease Dcr-1 n=3 Tax=Culicini RepID=B0W7S3_CULQU Length = 2270 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 96/254 (37%), Gaps = 41/254 (16%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSA----SSKHNERLEFLGDSILSYVIANALYHRFPR 62 + + LGY F + L QA+TH S + +RLEFLGD++L Y+I LY + Sbjct: 2015 SAFEDSLGYRFQDRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQ 2074 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS------------------- 103 G ++ +R+ LV A LA + + R L Sbjct: 2075 HSPGALTDLRSALVNNTIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHSISEE 2134 Query: 104 ------------GGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGD 151 L D E++ G +FLDS++ + Y+ + Sbjct: 2135 YYLISEDECDEAEDVEVPKALGDVFESVAGAIFLDSNMS--LDAVWRVYRGMMGPEIEQF 2192 Query: 152 KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKA 211 PK+ ++E L+ L T + A + + +V G G G + R A Sbjct: 2193 SNSVPKSPIRELLE---LEPETAKFGKPEKLADGRRVRVTVEVFGKG-TFRGIGRNYRIA 2248 Query: 212 EQAAAEQALKKLEL 225 + AA+ AL++L+ Sbjct: 2249 KCTAAKCALRQLKK 2262 Score = 77.9 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 20 QELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 ++ QALT +A+ N ERLE +GDS L Y I LY + V EG +S +R+ V Sbjct: 1731 PSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVSN 1790 Query: 79 NTLAELAREFELGECLRLGPGELKSG 104 L L R LGE + E Sbjct: 1791 LNLYRLGRRKVLGESMIATKFEPHDN 1816 >UniRef50_UPI000186E07F dicer-1, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E07F Length = 2179 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 93/258 (36%), Gaps = 45/258 (17%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61 + + + Y F + L QALTH S + +RLEFLGD++L Y+I LY Sbjct: 1914 FDIFEESIKYRFRDRSYLLQALTHASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSR 1973 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS------------------ 103 G ++ +R+ LV A LA + + R L Sbjct: 1974 HHSPGALTDLRSALVNNTIFASLAVRHDFHKYFRHLCPSLNEVVDRFVRFQQANGHAISE 2033 Query: 104 -------------GGFRRESILADTVEALIGGVFLDSDI--QTVEKLILNWYQTRLDEIS 148 L D E++ G +FLDS + V ++ + ++ S Sbjct: 2034 EFYLIEEEECEEAEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWRVYYRIMKNEIELFS 2093 Query: 149 PGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR 208 + K P L E T + A + + +V G G G + Sbjct: 2094 T-NVPKSPIRELFEL------EPETAQFGKPEKLADGRRVRVSVEVFGKGI-FNGIGRNY 2145 Query: 209 RKAEQAAAEQALKKLELE 226 R A+ AA+ ALK+L+ + Sbjct: 2146 RIAKCTAAKCALKQLKRK 2163 Score = 76.0 bits (186), Expect = 8e-13, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 14 GYTFNHQELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMR 72 G+ L+ QALT +A+ N ERLE +GDS L Y I LY + V EG +S +R Sbjct: 1633 GHPGPSPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCIYENVHEGKLSHLR 1692 Query: 73 ATLVRGNTLAELAREFELGECLRLGPGELKSG 104 + V L L R+ LGE + E Sbjct: 1693 SKQVSNFNLYRLGRKKMLGESMVATKFEPHDN 1724 >UniRef50_Q2NJY3 Ribonuclease 3 n=14 Tax=Candidatus Phytoplasma RepID=RNC_AYWBP Length = 237 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 81/224 (36%), Positives = 118/224 (52%), Gaps = 13/224 (5%) Query: 5 VINRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYH 58 I L + L + L +QALTH S S++ NERLEFLGD+I+ ++A+ LY Sbjct: 3 NIQILFQTLNIFPKNLVLYKQALTHSSYSNEQTPPQEDNERLEFLGDAIVGLLMADYLYS 62 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 + + DEG M++ RA V +L A++ EL L LG GE K+ F + I+ADT EA Sbjct: 63 Q-SKEDEGIMTKKRAQAVCEKSLTIYAQKIELQNYLLLGKGE-KNKDFNAKGIMADTFEA 120 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 L G ++LD T +K+ N ++ D KT+LQE +Q Y +VQ Sbjct: 121 LFGAIYLDLGYLTAKKVFHNIVLPH---LAKTIYIIDFKTQLQEIVQSEK-KTIQYKIVQ 176 Query: 179 VRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +G AH + F + + G GS+++ AEQ AA+QAL K Sbjct: 177 EQGPAHSKNFVAEVYLE-KNLLGTGEGSTKKSAEQKAAQQALSK 219 >UniRef50_Q86MA9 Dicer-1 n=2 Tax=Anopheles gambiae RepID=Q86MA9_ANOGA Length = 2259 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 102/276 (36%), Gaps = 64/276 (23%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61 ++ LGY F + L QA+TH S S + +RLEFLGD+IL Y+I LY Sbjct: 1982 FEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRR 2041 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRL------------------------- 96 + G ++ +R+ LV A LA + Sbjct: 2042 QHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRITE 2101 Query: 97 ---------------------GPGELKSGG----FRRESILADTVEALIGGVFLDSDI-- 129 GPGE + G L D E++ G +FLDSD+ Sbjct: 2102 EEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSL 2161 Query: 130 QTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFT 189 TV K+ +++ S PK+ ++E L+ T + + Sbjct: 2162 DTVWKVYRKMMGPEIEKFSSS----VPKSPIRELLEME---PETAKFGKPEKLTDGRRVR 2214 Query: 190 IHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 + +V G G G + R A+ AA+ AL++L+ Sbjct: 2215 VTVEVFGKG-TFRGIGRNYRIAKCTAAKCALRQLKK 2249 Score = 82.2 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Query: 20 QELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 ++ QALT +A+ N ERLE +GDS L Y I LY R+ V EG +S +R+ V Sbjct: 1664 PAIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1723 Query: 79 NTLAELAREFELGECLRLGPGELKSG 104 L L R LG+C+ E Sbjct: 1724 LNLYRLGRRKRLGDCMIAAKFEPHDN 1749 >UniRef50_Q53844 Ribonuclease 3 n=3 Tax=Mollicutes RepID=RNC_SPICI Length = 248 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 8/230 (3%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSASSKH-----NERLEFLGDSILSYVIANALYH 58 I + ++ ++ +ALTH S +++H +R+EFLGD+IL+ I+ L+ Sbjct: 13 IELKAFFKQYHVFIKERQYYLEALTHNSYANEHNLSYTYQRMEFLGDAILAKEISLYLFL 72 Query: 59 RFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEA 118 FP +EG+++ +R+ +VR TLAEL R L LG GE+K+ G+ + ILAD E+ Sbjct: 73 SFPDKNEGEITNLRSKIVREGTLAELVRRMNWAPFLLLGKGEIKTKGYEKNRILADIYES 132 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQ 178 +I ++LD V I N + DK +D KT LQE+LQ Y +++ Sbjct: 133 MIAALYLDLGEDVVRTFINNTLIRMVSNPGFFDKIRDYKTELQEFLQAGDARTLEYKLIK 192 Query: 179 VRGE--AHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + +T+ ++ G+ G G + ++AEQ AA AL+KL + Sbjct: 193 ESQPLEGNRVLYTVVAEIGGIR-YGEGCGYTHKEAEQLAARDALQKLATK 241 >UniRef50_Q69KJ0 Ribonuclease 3-like protein 3 n=2 Tax=Oryza sativa RepID=RTL3_ORYSJ Length = 299 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 33/249 (13%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSK-----HNERLEFLGDSILSYVIANA 55 M P + ++ LGY F + L+++ALTH S ERLE+LGD++L+ V++ Sbjct: 34 MGPGEVAAVESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSRE 93 Query: 56 LYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGE--------------- 100 ++ + ++ G ++R+RA V LA +A L LR Sbjct: 94 VFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIEELSMY 153 Query: 101 --LKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDE-ISPGDKQKDPK 157 +G +L D VE+LIG ++ DS+ ++++ +Q D IS K P Sbjct: 154 PIHSNGLLDPPKVLCDVVESLIGAIYCDSNFN--QEIVWQVFQKLADPLISLETLGKHPV 211 Query: 158 TRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGT-GSSRRKAEQAAA 216 + L E+ Q V++ + D+ T+ + G T + A+ AA Sbjct: 212 SELFEFCQKTRRG------VKIVKDEWDKNLTVEVLIDG-EMVGRATYAQKKEIAQNRAA 264 Query: 217 EQALKKLEL 225 + AL KL+ Sbjct: 265 KAALDKLKE 273 >UniRef50_A9NES4 DsRNA-specific ribonuclease III n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NES4_ACHLI Length = 219 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 13/221 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK----HNERLEFLGDSILSYVIANALYHRFP 61 +N L ++L H +L QALTH S + + HNERLEFLGD+++ +++ L+ Sbjct: 1 MNDLLKQLNIETKHIDLYLQALTHTSYAHENQTDHNERLEFLGDAVIELMMSTYLF-THD 59 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 + ++G +++ RA VR L A++ +L +RLG GE + S++AD EA G Sbjct: 60 QSNQGVLTKRRAQAVREEALVLYAQKMDLESKMRLGNGEQ----IAKPSMIADAFEAFFG 115 Query: 122 GVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRG 181 +++D ++ ++ + KD KT+LQE++Q L +Y V+V G Sbjct: 116 ALYMDQGFDKTYEIFNKVVIPH---LNLVEHIKDYKTQLQEFIQLERKSL-SYKTVKVGG 171 Query: 182 EAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKK 222 +H F + G GSS ++AEQ AA++AL K Sbjct: 172 PSHRPIFKSEVFLENSIMLGTGQGSSTKEAEQNAAKEALSK 212 >UniRef50_C4Q7C6 Ribonuclease III, putative n=2 Tax=Schistosoma mansoni RepID=C4Q7C6_SCHMA Length = 1577 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 13/228 (5%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRS-----ASSKHNERLEFLGDSILSYVIANALYHRF 60 + L+ LG F H +L +A+T R + N+RLEFLGDS+L YV + L+ F Sbjct: 1108 LCTLEDTLGIKFKHLRVLARAMTIRKTGFNFYTLGDNQRLEFLGDSLLKYVSTDYLFRHF 1167 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRL--GPGELKSGGFRRESILADTVEA 118 PR EG +S ++ +LV T A + E L + + + AD +EA Sbjct: 1168 PRHHEGHLSLLKNSLVNKYTQASVCSELGLEHYVIHRNKNDNCNNSQNQNVKYRADLLEA 1227 Query: 119 LIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL-----QGRHLPLPT 173 IG +F+D D+ VE+ + RL E + D K++LQ+ + Sbjct: 1228 FIGALFVDKDLAWVERFCQICFWPRLVEFILKQEWNDAKSKLQQCCLTFRSLNEDPEIAH 1287 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK 221 Y V++ G + + + + G G G S ++A+ AA++AL+ Sbjct: 1288 YKVLEHSGPTNQRVYRVGVYFRGQR-LATGEGRSVQQAQMEAAKKALE 1334 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 75/218 (34%), Gaps = 60/218 (27%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSKH---NE-------------------RLE-- 41 + L+ +LGYTFN + LL Q+LTH S + N+ +LE Sbjct: 875 LESLENRLGYTFNDKSLLHQSLTHPSYRRTNFGTNQDHFQNSLVSCGPRILEYGDKLELY 934 Query: 42 -----------------------------------FLGDSILSYVIANALYHRFPRVDEG 66 FLGD+++ + + L+ FP + EG Sbjct: 935 KAWRKKGLTKMIQVMSFLPKMHEERSNIYGNERLEFLGDAVVEVISSIHLFFMFPELSEG 994 Query: 67 DMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLD 126 + R +V+ LAELA + + L +D EAL+ + LD Sbjct: 995 HLDAYRQAIVQNQHLAELAVRLGIHKYLLYTHSVDFCYDSTFIYARSDAFEALMAAITLD 1054 Query: 127 SDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYL 164 + + V+++ + I + P LQ Sbjct: 1055 AGLDIVDRIFGAVLFGDDERI-HRVWVQIPLHPLQSQC 1091 >UniRef50_Q1DKI1 ATP-dependent helicase DCL1 n=2 Tax=Coccidioides immitis RepID=DCL1_COCIM Length = 1464 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 95/254 (37%), Gaps = 38/254 (14%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASS-----KHNERLEFLGDSILSYVIANALYHRFP 61 ++++KLGY F + +LL+ A TH S S +RLEFLGD++L +YH+ P Sbjct: 1188 AQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEFLGDALLDMACVEHIYHKHP 1247 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRL------------------------G 97 D ++ + +V L +A L L Sbjct: 1248 DKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELESGD 1307 Query: 98 PGELKSGGFRRESILADTVEALIGGVFLDSD--IQTVEKLILNWYQTRLDEISPGDK--Q 153 P + + L D VEA IG +F+DS + VE+ + + ++++ D Sbjct: 1308 PPDAWTLTSDPPKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFLKKHFEDMTIYDTYAN 1367 Query: 154 KDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQ---EFTIHCQVSGLSEPVVGTGSSRRK 210 K P T L L Y + D V G SS R Sbjct: 1368 KHPTTYLHNRLAIDFGCS-NYCLKAGEVPYVDGPGTRVLAAVIVHD-EVVAEGVASSSRY 1425 Query: 211 AEQAAAEQALKKLE 224 A+ A+E AL KLE Sbjct: 1426 AKLKASEAALSKLE 1439 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 42/142 (29%) Query: 4 IVINRLQRKLGYTFNHQELLQQALT--------HRSAS-------SKHNERLEFLGDSIL 48 I + Q L + EL +ALT HR+ K+ ERLEFLGD L Sbjct: 1014 IALEACQE-LDLPIS-PELALEALTKDSDNTDEHRAQQIHFQRGMGKNYERLEFLGDCFL 1071 Query: 49 SYVIANALYHRFPRVDE-----GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS 103 + +L+ P DE G ++ ++ G ++ Sbjct: 1072 KMATSISLFAMNPDNDERGWYPGGLTLLQGKG--------------------QSKGATEN 1111 Query: 104 GGFRRESILADTVEALIGGVFL 125 + +AD EALIG L Sbjct: 1112 KHALADKTIADVCEALIGACCL 1133 >UniRef50_UPI0001C41B85 ribonuclease III Rnc n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B85 Length = 232 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 8/222 (3%) Query: 9 LQRKLGYTFNHQELLQQALTHRSASSKH----NERLEFLGDSILSYVIANALYHRFPRVD 64 + K N EL + A TH S +SKH ERLEFLGDS+L+ + + L + P Sbjct: 3 ILNKFDIVPNDMELYETAFTHSSYASKHHLNDYERLEFLGDSVLNMLTSEFLQNMHPDFG 62 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVF 124 EG ++++RA V N L + EF L +C++L + SI AD E+ +G ++ Sbjct: 63 EGKLTKLRANYVCQNALIVYSHEFGLDKCVKLNLEDNALTDNEVISITADVFESFLGAIY 122 Query: 125 LDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 LD I ++ + ++ D K+ ++EY TY +++ G H Sbjct: 123 LDQGISKCKEFLTITVFPYIEN--EQIFFHDYKSTIKEYGDAIDKE-ITYELIEEHGAPH 179 Query: 185 DQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 D+ F + + G+ G G S+++AEQ AA A+K L L+ Sbjct: 180 DKTFVMKILIDGVDF-GHGVGKSKKEAEQVAACNAIKTLRLD 220 >UniRef50_C2MCM1 Ribonuclease III n=3 Tax=Porphyromonas uenonis 60-3 RepID=C2MCM1_9PORP Length = 243 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 16/230 (6%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSAS-------SKHNERLEFLGDSILSYVIANAL 56 + L ++G +L A+ HRS + +NERLEFLGD++L I L Sbjct: 10 PDLTSLFDRIGIVPVRTDLYLLAMRHRSCTIIGEGGEKLNNERLEFLGDAVLEASICTYL 69 Query: 57 YHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTV 116 YH P DEGD+S+ +++LV E+ R L + + P L + I +TV Sbjct: 70 YHLHPTWDEGDLSKCKSSLVSRPVNNEVGRRLHLERYIIMVPSALDN----SVDIYGNTV 125 Query: 117 EALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGD--KQKDPKTRLQEYLQGRHLPLPTY 174 EALIG ++LD + + ++ ++ ++ K+ L E++Q HL + Sbjct: 126 EALIGAIYLDQGYARTQDFVRDYILPTYRDMREHTVASIQNYKSELIEWVQKHHLSH-EF 184 Query: 175 LVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + + + HD F + G G GSS+++A+Q AA L+ L+ Sbjct: 185 RLEEHQTMPHD-HFIYSVWIDGKPV-GRGAGSSKKRAQQEAARDTLELLK 232 >UniRef50_A9YW43 Putative uncharacterized protein n=2 Tax=unclassified Phycodnaviridae RepID=A9YW43_OSV5 Length = 241 Score = 195 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 12/226 (5%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHRF 60 +++ +G Q+A TH+SA + E LEF+GDS+L ++I L+ R+ Sbjct: 6 QDIEQLVGTKIRDLSFYQRAFTHKSALKEYEQFNVSFETLEFMGDSVLGFIITKFLFDRY 65 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 EG +++ R LVR TLA +A + L + + + ++G IL D EAL+ Sbjct: 66 EERQEGFLTKARTKLVRSETLAAIALKLGLNKLVLMDEKGTRNGWNNNPKILEDVFEALV 125 Query: 121 GGVFLDSDIQTVEKLILNWYQ-TRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179 G +++D + ++ +L Y + +++ + K +L + Q +LPLP Y VV Sbjct: 126 GAIYMDLGLLHAKQFVLRIYNDPKYIDLNSIMVDDNFKDKLMRHCQVNNLPLPEYEVVS- 184 Query: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLEL 225 + F + ++G G S+++AEQ AA+ ++ Sbjct: 185 ---HWEGNFYVDALING-RFCGRGQAKSKKQAEQLAAKAFFNYIKE 226 >UniRef50_B0MUL3 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL3_9BACT Length = 264 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 13/216 (6%) Query: 9 LQRKLGYTFNHQELLQQALTHRSAS-------SKHNERLEFLGDSILSYVIANALYHRFP 61 + G+ ++ EL + AL H+SAS +NERLEFLGD+++ V ++ LY FP Sbjct: 23 IDELFGFVPHNIELYKLALIHKSASLVLADGRQINNERLEFLGDAVIEAVTSDYLYIEFP 82 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIG 121 EG ++++R+ +V +L +AR L + P +G ++ I D EA+IG Sbjct: 83 DRQEGFLTQLRSKIVSRQSLNTIARTIGLDRYVIANP----TGSTNQKHIYGDAFEAMIG 138 Query: 122 GVFLDSDIQTV-EKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 ++LD + LI N Y L+ + D++ D K+RL E+ Q H + V Sbjct: 139 AIYLDQGYEFANRLLINNIYYRYLNLDNLTDEETDFKSRLIEWCQKTHHTIAFETVHGRN 198 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAA 216 ++ F + G+ G G S+++AEQ AA Sbjct: 199 YSSNHPIFDATVVIDGIRV-GHGQGESKKEAEQCAA 233 >UniRef50_C5J8U0 Dicer-1 n=3 Tax=Coelomata RepID=C5J8U0_BLAGE Length = 2271 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 93/248 (37%), Gaps = 45/248 (18%) Query: 9 LQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFPRVD 64 +R++ Y F + L Q+LTH S S + +RLEFLGD++L Y+I LY + Sbjct: 2018 FERRIRYKFRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHS 2077 Query: 65 EGDMSRMRATLVRGNTLAELAREFELGECLRLGPG------------------------- 99 G ++ +R+ LV A LA + + R Sbjct: 2078 PGALTDLRSALVNNTIFASLAVRYGFHKYFRHLSPGLNEVVDRFVRIQEENGHTISEEYY 2137 Query: 100 ------ELKSGGFRRESILADTVEALIGGVFLDSDI--QTVEKLILNWYQTRLDEISPGD 151 ++ L D E++ G +FLDS + V ++ ++ +++ S + Sbjct: 2138 LIEEEECEEAEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWRVYYRMMKSEIEQFST-N 2196 Query: 152 KQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKA 211 K P L E T + A + + +V G G G + R A Sbjct: 2197 VPKSPIRELLEL------EPETAKFGKPEKLADGRRVRVTVEVFGKG-TFKGIGRNYRIA 2249 Query: 212 EQAAAEQA 219 + AA+ A Sbjct: 2250 KCTAAKCA 2257 Score = 76.8 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 20 QELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 ++ QALT +A+ N ERLE +GDS L Y I LY + + EG +S +R+ V Sbjct: 1726 PSVILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSN 1785 Query: 79 NTLAELAREFELGECLRLGPGELKSG 104 L L R GE + E Sbjct: 1786 LNLYRLGRRKVFGESMIATKFEPHDN 1811 >UniRef50_UPI000180BCF4 PREDICTED: similar to rCG20888 n=1 Tax=Ciona intestinalis RepID=UPI000180BCF4 Length = 2053 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 101/271 (37%), Gaps = 57/271 (21%) Query: 4 IVINRLQRKLGYTFNHQELLQQALTHRSA----SSKHNERLEFLGDSILSYVIANALYHR 59 + ++ +RK+ YTF ++ L QA TH S + +RLEFLGD++L ++I L++ Sbjct: 1785 VALSGFERKINYTFKNKAYLLQAFTHASYYYNTVTDCYQRLEFLGDAVLDFLITRHLFND 1844 Query: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS---------------- 103 G ++ +R+ LV A LA ++ + + EL Sbjct: 1845 ERHHSPGALTDLRSALVNNTIFASLAVHYDFHKYFKSISPELHHIIEDFVMYQQKQEDAQ 1904 Query: 104 ------------------------------GGFRRESILADTVEALIGGVFLDSDIQTVE 133 L D E++ G +++DS + Sbjct: 1905 GMDAHLMRDYDRVEIVAPSSLEKDEEEGENEDVEVPKALGDIFESVAGAIYMDSGMDLSS 1964 Query: 134 KLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQ 193 + Y + + P++ ++E L+ P + +D + + + Sbjct: 1965 --VWKVYSVMMLPLIEKFSACVPRSPVRELLEME----PETAKFSCAEKRYDGKVRVTVE 2018 Query: 194 VSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224 + G G G S R A+ AAA +AL+ L+ Sbjct: 2019 IIGKGR-FKGVGRSYRIAKSAAARRALRYLK 2048 Score = 83.7 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 20 QELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 L+ QALT +AS N ERLE LGDS L + + LY +P EG +S MR+ V Sbjct: 1458 PGLILQALTLSNASDGFNLERLEMLGDSFLKHAVTVYLYCTYPESHEGKLSYMRSKKVSN 1517 Query: 79 NTLAELAREFEL 90 L + ++F L Sbjct: 1518 YNLYRIGKQFGL 1529 >UniRef50_C5JNK5 Dicer-like protein n=3 Tax=Ajellomyces RepID=C5JNK5_AJEDS Length = 1522 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 94/254 (37%), Gaps = 38/254 (14%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSASS-----KHNERLEFLGDSILSYVIANALYHRFP 61 ++ +LGY F + LL+ A TH S S +RLEFLGDS+L V LYHR+P Sbjct: 1236 KQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPCYQRLEFLGDSLLDMVCVEYLYHRYP 1295 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRL------------------------G 97 D ++ + +V L +A + L L Sbjct: 1296 DRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQITRYVEEIELAEADSNN 1355 Query: 98 PGELKSGGFRRESILADTVEALIGGVFLDSD--IQTVEKLILNWYQTRLDEISPGDKQ-- 153 + + L D +EA IG +F+DS+ + VE + +++S D Sbjct: 1356 SPDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFKFEVVEDFFQQHLKQYFEDMSIYDTFAN 1415 Query: 154 KDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHD---QEFTIHCQVSGLSEPVVGTGSSRRK 210 K P T L +Y + + D V G SS R Sbjct: 1416 KHPTTYFHNRLTIDFGCT-SYCLKAGEVQMVDGTEPRVYAAVIVHD-EFVAEGIASSVRY 1473 Query: 211 AEQAAAEQALKKLE 224 A+ A+E AL KLE Sbjct: 1474 AKIKASEAALAKLE 1487 Score = 79.8 bits (196), Expect = 6e-14, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 49/140 (35%), Gaps = 23/140 (16%) Query: 35 KHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECL 94 K+ ERLEFLGD L + +L+ P DE D R L+ L A +L E + Sbjct: 1072 KNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEFI 1131 Query: 95 RL-------------------GPGELKSGGFRRESILADTVEALIGGVFLDSD----IQT 131 R E ++ + +AD EALIG L + Sbjct: 1132 RTQGFSRRNWYPEGIKLLQGKAKSESQNKHSLGDKTIADICEALIGASLLSGGKAHRFDS 1191 Query: 132 VEKLILNWYQTRLDEISPGD 151 K + + + S + Sbjct: 1192 AVKAVTTFVNSDDHRASEWN 1211 >UniRef50_Q4SZJ7 Chromosome undetermined SCAF11600, whole genome shotgun sequence n=4 Tax=Euteleostomi RepID=Q4SZJ7_TETNG Length = 479 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 47/258 (18%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61 +RK+ YTF ++ L QA TH S + +RLEFLGD+IL Y+I LY Sbjct: 223 FENFERKISYTFQNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 282 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGE--------------------L 101 + G ++ +R+ LV A LA +++ + + E + Sbjct: 283 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGM 342 Query: 102 KSGGFRR------------ESILADTVEALIGGVFLDSDI--QTVEKLILNWYQTRLDEI 147 S R + D E+L G +++DS + +TV ++ + +++ Sbjct: 343 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKF 402 Query: 148 SPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSS 207 S + + P L E P +D + + +V G + G G S Sbjct: 403 SA-NVPRSPVRELLEM-------EPETAKFSPAERTYDGKVRVTVEVVGKGK-FKGVGRS 453 Query: 208 RRKAEQAAAEQALKKLEL 225 R A+ AAA +AL+ L+ Sbjct: 454 YRIAKSAAARRALRSLKA 471 >UniRef50_C6XX79 Ribonuclease III n=4 Tax=Sphingobacteriaceae RepID=C6XX79_PEDHD Length = 242 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 11/230 (4%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASS-------KHNERLEFLGDSILSYVIAN 54 + + I +L+ LG+ + L + A HRS + NERLEFLGD++L VIA Sbjct: 14 DKVFIRKLKNILGFVPGNATLYKMAFRHRSVAKILKNGSRSSNERLEFLGDAVLGSVIAE 73 Query: 55 ALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILAD 114 L+ +P +EG ++ MR+ +V L +LAR+ + + + S+L D Sbjct: 74 LLFKSYPYKEEGFLTEMRSKIVNRANLNQLARKMGFDQLIVFDQKAVNVQTKH-HSMLGD 132 Query: 115 TVEALIGGVFLDSDIQTVEKL-ILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPT 173 EALIG V+LD + + + +D + + + K++L E+ Q T Sbjct: 133 AFEALIGAVYLDKGYNFTREFLLKRIVKPYIDIHTLELTETNFKSKLIEWCQRHGKD-IT 191 Query: 174 YLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKL 223 + +++ + FTI V G S +G +++ AE+ AAE+A + L Sbjct: 192 FDMMENEEGESAKLFTIQAVVEGES-YGIGRDYNKKNAEKLAAEKACEAL 240 >UniRef50_Q1IJU6 Ribonuclease III n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJU6_ACIBL Length = 258 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 22/230 (9%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSASSK------------HNERLEFLGDSILS 49 I L++ L + F QELL +ALTH S + + NE+LEF+GDS+L+ Sbjct: 3 KSRDIAALEKALDHKFEEQELLVRALTHSSYAREQRDHIHDNSVPNDNEQLEFIGDSVLA 62 Query: 50 YVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRE 109 +V + L +FP EG++S++RA LV L + AR +LG+ LRLG GE +SGG + Sbjct: 63 FVTSQELVKKFPHFQEGELSKLRAYLVSARHLIQTARNLDLGKFLRLGRGEERSGGRSKS 122 Query: 110 SILADTVEALIGGVFLDSDIQTVEKLILN-----WYQTRLDEISPGDKQKDPKTRLQEYL 164 +IL D +EA+I ++LD ++ +K IL + E D K+ LQE Sbjct: 123 AILVDALEAVIAAIYLDGGLRVAQKFILREIVRPELKRMETEHGSALPVTDYKSALQEQA 182 Query: 165 QGRHLPLPTYLVVQVRGEAHDQEFTIHCQV--SGL---SEPVVGTGSSRR 209 Y VV+ G H + FT+ ++ G G +++ Sbjct: 183 HAAGRKRIVYAVVKEEGPEHRKTFTVEARILSDGNEAPEFVARAEGPTKK 232 >UniRef50_A7LFZ6 Endoribonuclease Dicer homolog 4 n=7 Tax=Poaceae RepID=DCL4_ORYSJ Length = 1657 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 30/249 (12%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASS---KHNERLEFLGDSILSYVIANALY 57 M+ I L+ +GY F H+ LL QA H S S +RLEFLGD++L YVI + LY Sbjct: 1209 MDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLY 1268 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFR---------- 107 +P + G ++ +R+ V ++LA A E + + L L S + Sbjct: 1269 STYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNS 1328 Query: 108 ---------RESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKT 158 L D VE+ IG V LDS ++ + +P Sbjct: 1329 EKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVW-KVMLMLLKPVLTFANMHTNPMR 1387 Query: 159 RLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSR--RKAEQAAA 216 L+E Q + + + D E+ + +V+ S+ ++ T ++R + A + AA Sbjct: 1388 ELRELCQCHG-----FELGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAA 1442 Query: 217 EQALKKLEL 225 ++ L KL+ Sbjct: 1443 QETLSKLKN 1451 Score = 80.6 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 41/158 (25%) Query: 23 LQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTL 81 + +ALT + ER E LGD+ L YV+ + + +DEG ++R R+ +V + L Sbjct: 1027 ILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHL 1086 Query: 82 AELAREFELGECLR---LGPGELKSGGFRRE----------------------------- 109 EL+ +L +R P + + G + Sbjct: 1087 YELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLHQMDIHPDNRENCNLRCT 1146 Query: 110 --------SILADTVEALIGGVFLDSDIQTVEKLILNW 139 ++AD VE+LIG ++ + + Sbjct: 1147 RSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWI 1184 Score = 50.2 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 6/81 (7%) Query: 150 GDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLS-----EPVVGT 204 K ++ L E + P + + + G +H ++FT V Sbjct: 1564 DMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSD 1623 Query: 205 GSS-RRKAEQAAAEQALKKLE 224 G ++ A++ AA+ AL L+ Sbjct: 1624 GKLQKKAAQEHAAQGALWCLK 1644 >UniRef50_D2KU68 Dicer n=3 Tax=Eumetazoa RepID=D2KU68_HEMPU Length = 1816 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 96/260 (36%), Gaps = 49/260 (18%) Query: 7 NRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFPR 62 + ++ + Y F + L QA TH S + +RLEFLGD++L Y+I LY Sbjct: 1563 DGFEKTINYRFKDRAYLLQAFTHSSYHRNSITDCYQRLEFLGDALLDYLITRHLYDHHTN 1622 Query: 63 VDEGDMSRMRATLVRGNTLAELAREFELGECLR--------------------------- 95 + G ++ +R+ LV A LA +F + + Sbjct: 1623 LSPGALTDLRSALVNNTIFASLAVKFNFHKYFKAYTANMFQVIDNFVTFVDAKNEALGMD 1682 Query: 96 -------LGPGELKSGGFRRESILADTVEALIGGVFLDSDI--QTVEKLILNWYQTRLDE 146 + + +S L D E++ G ++LDS + V K+ + ++++ Sbjct: 1683 SQLKYSEMDGEQEESEDIEVPKALGDIFESVAGAIYLDSGMSLNAVWKVYYPMMKQQIEQ 1742 Query: 147 ISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGS 206 + D P L E P + D + + V G + G G Sbjct: 1743 YA-SDLPISPVRELLEM-------EPETARFGPPEKTIDGKTRVTVNVVGKGQ-FKGIGR 1793 Query: 207 SRRKAEQAAAEQALKKLELE 226 + A+ AA AL+ L+ + Sbjct: 1794 NYHIAKATAARFALRHLKSQ 1813 Score = 74.8 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 20 QELLQQALTHRSASSKHN-ERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 ++ Q+LT ++S N ERLE LGDS L + LY +P +DEG +S +R+ V Sbjct: 1256 PTIILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSN 1315 Query: 79 NTLAELAREFELGECLRLG 97 L L + L +++ Sbjct: 1316 FNLYCLGEKKALAHKMQVS 1334 >UniRef50_A4GK15 Ribonuclease III n=1 Tax=uncultured marine bacterium HF130_81H07 RepID=A4GK15_9BACT Length = 220 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 80/226 (35%), Positives = 131/226 (57%), Gaps = 8/226 (3%) Query: 1 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF 60 MN +L++ LGY+F +E L +ALTH S S ++NE EFLGDS+L+ +I+ L +F Sbjct: 1 MNK-DFKKLEKNLGYSFQKKETLVKALTHVSKSKENNEVFEFLGDSVLNLIISQILVEKF 59 Query: 61 PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI 120 DEG +S MR+ LV TL ++A++ EL + G+ +G E+IL +++EA+ Sbjct: 60 SMDDEGTLSLMRSKLVSRTTLNKIAKKLELDSFIV--KGDSLAGQETPENILGNSLEAIF 117 Query: 121 GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR 180 G V+ +S ++ ++K+I + ++ + G+ K+ KT LQEY Q LPTY Q+ Sbjct: 118 GAVYKESGLEFIQKIIETTFAKEIELLREGNL-KNSKTLLQEYCQKNKFSLPTYN--QIE 174 Query: 181 GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE 226 + + F + C++ S G G S + AEQ AA + LKK+ ++ Sbjct: 175 KKENIYPFIVTCKLDDSS--SEGFGKSLKLAEQDAAARLLKKIGVK 218 >UniRef50_A8Y3J1 C. briggsae CBR-DCR-1 protein n=3 Tax=Caenorhabditis briggsae RepID=A8Y3J1_CAEBR Length = 2030 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 50/260 (19%) Query: 6 INRLQRKLGYTFNHQELLQQALTHRSASSK----HNERLEFLGDSILSYVIANALYHRFP 61 +L+ K+GY F + L QA TH S + +RLEFLGD++L Y+I L+ Sbjct: 1762 FAQLEEKIGYRFKDRAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYMITRYLFEDVR 1821 Query: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGE-CLRLGPGELKS----------------- 103 + G ++ +R+ LV A LA +FE + + + PG Sbjct: 1822 QYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLHHMIEKFVKLCGDRSFDTNF 1881 Query: 104 ------------------GGFRRESILADTVEALIGGVFLDSD--IQTVEKLILNWYQTR 143 L D E++ G ++LDS + T ++I + + Sbjct: 1882 NTEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRNLDTTWQVIYHLMKGT 1941 Query: 144 LDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVG 203 ++ P++ ++E ++ + ++ E+ T+ G + G Sbjct: 1942 IETCCANP----PRSPIRELMELEGTKA-RFSKMERILESGKVRVTVDV---GNNMRFTG 1993 Query: 204 TGSSRRKAEQAAAEQALKKL 223 G + R A+ AA++ALK L Sbjct: 1994 MGRNYRIAKATAAKRALKYL 2013 Score = 72.5 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 20 QELLQQALTHRSASSK-HNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRG 78 LL ALT +AS ER E +GDS L + + LYH EG +S R+ V Sbjct: 1513 PCLLLTALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQEQHEGKLSWARSKEVSN 1572 Query: 79 NTLAELAREFELGECLRLGP 98 L L ++ + + + Sbjct: 1573 CNLYRLGKKLGIPQLIVANK 1592 >UniRef50_C5WU72 Putative uncharacterized protein Sb01g015670 n=2 Tax=Sorghum bicolor RepID=C5WU72_SORBI Length = 1385 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 32/250 (12%) Query: 2 NPIVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALY 57 N I + L+ L Y F+ LL +ALTH S + +RLEFLGD++L ++ + Y Sbjct: 1128 NFINLRSLELMLDYNFSDPSLLLEALTHGSYQIAGTTACYQRLEFLGDAVLDHIFTDYFY 1187 Query: 58 HRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRL--------------------- 96 H++P ++ +R+ V + A A + L + + Sbjct: 1188 HQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHILHSSSALHKKMADYLDKFEQSFS 1247 Query: 97 GPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEI-SPGDKQKD 155 GP G +L D +E++ G +++D+ + +K++ + L+ + +P + D Sbjct: 1248 GPSHGWEAGICLPKVLGDVIESIAGAIYIDT--KNDKKVVWRKMKRLLEPLATPDTLEID 1305 Query: 156 PKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAA 215 P L E+ + Y V + + Q G + TG ++R A++ A Sbjct: 1306 PVKELHEFCDPK-TCSIKYTVARE---DRVTSVAVEVQTKGTTYKATRTGLTKRDAKKLA 1361 Query: 216 AEQALKKLEL 225 A+ LK ++ Sbjct: 1362 AKSVLKDMKA 1371 >UniRef50_B6W6L3 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W6L3_9FIRM Length = 228 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 8/195 (4%) Query: 13 LGYTFNHQELLQQALTHRSASSKH-------NERLEFLGDSILSYVIANALYHRFPRVDE 65 +GY+F ++ L+ ALTH S ++ NERLEFLGDSIL V++ LY E Sbjct: 18 IGYSFKNKNLIDVALTHSSYINESKDKNRSSNERLEFLGDSILDLVVSEELYKNHKSYPE 77 Query: 66 GDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFL 125 G ++++R+ +V ++ ++ + +F L L G GE+ G ++S+ ADT EA ++L Sbjct: 78 GKLTKIRSRIVCTSSFSKASEKFNLSSYLLFGKGEISHNGREKKSVKADTFEAFCAAIYL 137 Query: 126 DSDIQTVEKLI-LNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAH 184 D+ ++ + N+YQT + + D KT+LQEY + + Y + + G H Sbjct: 138 DAGYVFLKNFLMENYYQTVKELLENDLLFIDYKTKLQEYFNKTNRTILKYKLAKEEGPEH 197 Query: 185 DQEFTIHCQVSGLSE 199 ++ F + Sbjct: 198 NKTFYMDVYAKNKKL 212 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.161 0.467 Lambda K H 0.267 0.0497 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,671,876,164 Number of Sequences: 3077464 Number of extensions: 84084253 Number of successful extensions: 213998 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1718 Number of HSP's successfully gapped in prelim test: 820 Number of HSP's that attempted gapping in prelim test: 205597 Number of HSP's gapped (non-prelim): 4314 length of query: 226 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 102 effective length of database: 658,790,820 effective search space: 67196663640 effective search space used: 67196663640 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 91 (39.4 bits)