Phyre 2 alignment of P76001 with c3igmA_

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Job Description | P76001
Confidence | 3.56% | Date | Wed Jan 25 15:21:05 GMT 2012
Rank | 44 | Aligned Residues | 21
% Identity | 14% | Template | c3igmA_
PDB info | PDB header:transcription/dna | Chain: A: PDB Molecule:pf14_0633 protein; | PDBTitle: a 2.2a crystal structure of the ap2 domain of pf14_0633 from p.2 falciparum, bound as a domain-swapped dimer to its cognate dna
Resolution | 2.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | V | F | C | D | V | K | E | K | L | C | R | D | D | R | Y | F | G | V | D | G | K | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |
Template Sequence |  | G | V | S | W | N | K | R | M | C | A | . | W | L | A | F | F | Y | D | . | G | A | S | R
Template Known Secondary structure |  | T |  |  |  |  | T | T | T | T |  | . |  |  |  |  |  |  |  | . | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 68 | . | 70 | . | . | . | . | . | . | . |  | . | . | 80 | . | . | . | . |  | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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