Phyre 2 alignment of P76001 with c2l3bA_

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Job Description | P76001
Confidence | 5.91% | Date | Wed Jan 25 15:21:05 GMT 2012
Rank | 25 | Aligned Residues | 21
% Identity | 29% | Template | c2l3bA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:conserved protein found in conjugate transposon; | PDBTitle: solution nmr structure of the bt_0084 lipoprotein from bacteroides2 thetaiotaomicron, northeast structural genomics consortium target3 btr376
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 84 | . | . | . | . | . | 90 | . | . | . | . | . | . |  |  |  |  |  | . | . | . | 100 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | V | F | C | D | V | K | E | K | L | C | R | D | D | . | . | . | . | . | R | Y | F | G | V | D | G | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | R | C | Q | L | H | R | D | G | R | F | E | E | T | K | Y | F | I | R | Y | F | Q | P | D | G | A
Template Known Secondary structure |  |  |  |  |  |  |  |  | S | S |  |  | S | S |  |  |  |  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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