Phyre 2 Results for P76001

Email | l.a.kelley@imperial.ac.uk
Description | P76001
Date | Wed Jan 25 15:21:05 GMT 2012
Unique Job ID | 5b22f41c30a74fff

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1ig4a_ |
|  | 50.9 | 32 | Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD
2 | c2a2bA_ |
|  | 49.6 | 41 | PDB header:antibiotic Chain: A: PDB Molecule:bacteriocin curvacin a; PDBTitle: curvacin a
3 | c2q3eH_ |
|  | 16.6 | 29 | PDB header:oxidoreductase Chain: H: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of human udp-glucose dehydrogenase complexed with nadh and2 udp-glucose
4 | d1flca1 |
|  | 11.7 | 45 | Fold:Viral protein domain Superfamily:Viral protein domain Family:Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein HEF1
5 | d1ua7a1 |
|  | 11.0 | 10 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
6 | c3ebkA_ |
|  | 9.9 | 22 | PDB header:allergen Chain: A: PDB Molecule:allergen bla g 4; PDBTitle: crystal structure of major allergens, bla g 4 from2 cockroaches
7 | c2yqpA_ |
|  | 8.5 | 44 | PDB header:gene regulation, hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx59; PDBTitle: solution structure of the zf-hit domain in dead (asp-glu-2 ala-asp) box polypeptide 59
8 | d1q90r_ |
|  | 8.5 | 33 | Fold:Single transmembrane helix Superfamily:ISP transmembrane anchor Family:ISP transmembrane anchor
9 | c1q90R_ |
|  | 8.5 | 33 | PDB header:photosynthesis Chain: R: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii
10 | c3plnA_ |
|  | 8.1 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: crystal structure of klebsiella pneumoniae udp-glucose 6-dehydrogenase2 complexed with udp-glucose
11 | d1qkia2 |
|  | 7.6 | 45 | Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:Glucose 6-phosphate dehydrogenase-like
12 | c3ggpA_ |
|  | 7.5 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from a. aeolicus in2 complex with hydroxyphenyl propionate and nad+
13 | d1hx0a1 |
|  | 7.1 | 40 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
14 | c3prjB_ |
|  | 7.0 | 29 | PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase.
15 | d1g94a1 |
|  | 6.6 | 40 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
16 | d1jaea1 |
|  | 6.6 | 40 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
17 | c2bhlB_ |
|  | 6.6 | 45 | PDB header:oxidoreductase (choh(d)-nadp) Chain: B: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose-6-phosphate dehydrogenase2 (deletion variant) complexed with glucose-6-phosphate
18 | c1e0fI_ |
|  | 6.5 | 37 | PDB header:coagulation/crystal structure/heparin-b Chain: I: PDB Molecule:haemadin; PDBTitle: crystal structure of the human alpha-thrombin-haemadin2 complex: an exosite ii-binding inhibitor
19 | d1e0fi_ |
|  | 6.5 | 37 | Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Leech antihemostatic proteins Family:Hirudin-like
20 | d3dhpa1 |
|  | 6.3 | 40 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
21 | d1t27a_ |
| not modelled | 6.2 | 16 | Fold:TBP-like Superfamily:Bet v1-like Family:Phoshatidylinositol transfer protein, PITP
22 | d1r0va3 |
| not modelled | 6.1 | 29 | Fold:MutS N-terminal domain-like Superfamily:tRNA-intron endonuclease N-terminal domain-like Family:tRNA-intron endonuclease N-terminal domain-like
23 | d1rmka_ |
| not modelled | 6.0 | 45 | Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:omega toxin-like Family:Conotoxin
24 | d1h9aa1 |
| not modelled | 6.0 | 33 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
25 | c2l3bA_ |
| not modelled | 5.9 | 29 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein found in conjugate transposon; PDBTitle: solution nmr structure of the bt_0084 lipoprotein from bacteroides2 thetaiotaomicron, northeast structural genomics consortium target3 btr376
26 | d2a1la1 |
| not modelled | 5.9 | 20 | Fold:TBP-like Superfamily:Bet v1-like Family:Phoshatidylinositol transfer protein, PITP
27 | c2l7qA_ |
| not modelled | 5.9 | 33 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein found in conjugate transposon; PDBTitle: solution nmr structure of conjugate transposon protein bvu_1572(27-2 141) from bacteroides vulgatus, northeast structural genomics3 consortium target bvr155
28 | c1e0fJ_ |
| not modelled | 5.8 | 37 | PDB header:coagulation/crystal structure/heparin-b Chain: J: PDB Molecule:haemadin; PDBTitle: crystal structure of the human alpha-thrombin-haemadin2 complex: an exosite ii-binding inhibitor
29 | c1qkiE_ |
| not modelled | 5.5 | 45 | PDB header:oxidoreductase Chain: E: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose 6-phosphate dehydrogenase2 (variant canton r459l) complexed with structural nadp+