Phyre 2 alignment of P76001 with d1iyjb3

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Job Description | P76001
Confidence | 2.08% | Date | Wed Jan 25 15:21:05 GMT 2012
Rank | 99 | Aligned Residues | 22
% Identity | 18% | Template | d1iyjb3
SCOP info | OB-fold | Nucleic acid-binding proteins | Single strand DNA-binding domain, SSB
Resolution | 3.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | R | Y | F | G | V | D | G | K | R | S | G | K | I | N | Q | T | T | T | K | M | L | F | M | C | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | G | W | Y | A | V | K | . | . | . | . | A | Q | L | D | P | P | L | L | A | L | V | K | S | G | R
Template Known Secondary structure |  |  | S | S |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2653 | . | . | . | . | . | . |  |  |  |  | 2660 | . | . | . | . | . | . | . | . | . | 2670 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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