179 d2java1 Probab=100.00  E-value=6e-34  Score=262.75  Aligned_columns=234  Identities=17%

Q ss_pred             CCCCEEEEEEEEEECCCEEEEEEEE---CCEEEEEEECHHHCCCHH-----HHHHHHHHHCCHHHHHHCCCCEEEEEECC
Q ss_conf             5998799988861018758999972---708999987602182789-----99999997110656511488179997027
Q batch____        10 STGELTTLGRELGKGGEGAVYDIEE---FVDSVAKIYHTPPPALKQ-----DKLAFMAATADAQLLNYVAWPQATLHGGR   81 (648)
Q Consensus        10 ~~~~~~~l~~~lG~Gg~G~Vy~a~~---~~~vA~K~~~~~~~~~~~-----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (648)
                      |.-+.|++.+.||+|+||+||+|+|   ++.||||++......+..     +|+.+|..++|+||+++.+         .
T Consensus         1 sk~~~y~~~~~iG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~---------~   71 (245)
T d2java1           1 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD---------R   71 (245)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEE---------E
T ss_pred             CCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEE---------E
T ss_conf             9665538988987529859999999899819999998258899999999999999997607898300211---------3


Q ss_pred             CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCEEEEEE
Q ss_conf             79868999847898988999871001014667899899999999999999999867944447896877887998389974
Q batch____        82 GGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLID  161 (648)
Q Consensus        82 ~~~~~~lvmE~~~G~~L~~~l~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHRDiKP~NIll~~~g~vkL~D  161 (648)
                      ..+..|+|||||++++|..++.........   +++.....++.+++.++.++|.    |+|+++.|++++..+..++.|
T Consensus        72 ~~~~~~~v~Ey~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~  144 (245)
T d2java1          72 IIDTLYIVMEYCEGGDLASVITKGTKERQY---LDEEFVLRVMTQLTLALKECHR----RSDLKPANVFLDGKQNVKLGD  144 (245)
T ss_dssp             EECCEEEEEECCTTEEHHHHHHHHHHHTCC---CCHHHHHHHHHHHHHHHHHHHH----HCCCCGGGEEECTTSCEEECC
T ss_pred             ECCCCHHHHHHHHHCCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCC
T ss_conf             035510133202312433211122345667---8999988876777777764000----012332222222333211222


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf             57622368987334666552127557718653478888856758899999999996599998988710146788865520
Q batch____       162 SDSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDIT  241 (648)
Q Consensus       162 FG~a~~~~~~~~~~~~~Gtp~~~tpe~~ape~~~g~~~~~~sDiyslGv~lye~L~~G~~Pf~g~~~~~~~~~~~~~~~~  241 (648)
                      ||...               ...++.|++||...+..++.++|+|||||+||||+ ||++||.+.+.......+.....+
T Consensus       145 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~~lyel~-tg~~Pf~~~~~~~~~~~i~~~~~~  208 (245)
T d2java1         145 FGLAR---------------ILGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC-ALMPPFTAFSQKELAGKIREGKFR  208 (245)
T ss_dssp             HHHHH---------------HCCCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCSCCCSSHHHHHHHHHHTCCC
T ss_pred             CCCCC---------------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf             22222---------------22222222211112444442044422899999985-379899888989999999718887


Q ss_pred             CCCCCCCCCHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHH
Q ss_conf             111222110000023687544894657999999999871899894658998999998
Q batch____       242 HFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAA  298 (648)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~~~p~~rps~~~~~~~  298 (648)
                                           ..+..+|+.+.+++.+||.+|  |..||++.++++|
T Consensus       209 ---------------------~~~~~~s~~~~~li~~~l~~d--P~~Rpt~~~il~h  242 (245)
T d2java1         209 ---------------------RIPYRYSDELNEIITRMLNLK--DYHRPSVEEILEN  242 (245)
T ss_dssp             ---------------------CCCTTSCHHHHHHHHHHTCSS--GGGSCCHHHHHTS
T ss_pred             ---------------------CCCCCCCHHHHHHHHHHCCCC--HHHCCCHHHHHCC
T ss_conf             ---------------------478238999999999865689--5567977899616