280 c3jr1A_ Probab=98.93   E-value=1.5e-09  Score=86.10  Aligned_columns=148  Identities=11%

Q ss_pred             CCEEEEE--EEEEECCCEEEEEEEE-CCEEEEEEECHHHCCCHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCEEEE
Q ss_conf             9879998--8861018758999972-708999987602182789999999971106565114881799970277986899
Q batch____        12 GELTTLG--RELGKGGEGAVYDIEE-FVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGF   88 (648)
Q Consensus        12 ~~~~~l~--~~lG~Gg~G~Vy~a~~-~~~vA~K~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   88 (648)
                      |.+++|.  +.||.|....||+.+. ++.+.||+-.+......+.|...++.+...+-+..|.    ++..+..++..|+
T Consensus        20 g~~~~i~~~~~l~gG~~n~~y~i~~~~~~~~lK~~~~~~~~~~~~E~~~L~~L~~~~~i~vP~----v~~~~~~~g~~~l   95 (296)
T c3jr1A_          20 GAYYFIKHKEKLYSGEXNEIWLINDEVQTVFVKINERSYRSXFRAEADQLALLAKTNSINVPL----VYGIGNSQGHSFL   95 (296)
T ss_dssp             SSCCCCCEEEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCC----EEEEEECSSEEEE
T ss_pred             CCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCE----EEEEECCCCEEEE
T ss_conf             998134364760788740389999689638998478762668999999999999738976870----5886166982899


Q ss_pred             EEECCCCCCHHHHHHHHHHHC-------------------------------------------------CCCCCCCHHH
Q ss_conf             984789898899987100101-------------------------------------------------4667899899
Q batch____        89 MMPKVSGKEPIHMIYSPAHRR-------------------------------------------------QSYPHCAWDF  119 (648)
Q Consensus        89 vmE~~~G~~L~~~l~~~~~~~-------------------------------------------------~~~~~l~~~~  119 (648)
                      +|||++|.++.....+.-.+.                                                 ..........
T Consensus        96 v~e~i~~~~~~~~~~~~lg~~lA~lh~~~~~~~~g~~~~~~~g~~~~~n~~~~~w~~f~~~~rl~~~~~~~~~~~~~~~~  175 (296)
T c3jr1A_          96 LLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGN  175 (296)
T ss_dssp             EEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSC
T ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             99715566679347999878899987023300157665676564433657545657899985688999878744799268


Q ss_pred             HHHHHHHHHHHHHHHH-HCCCCCCCCCHHHEEECCCCEEEEEECCC
Q ss_conf             9999999999999998-67944447896877887998389974576
Q batch____       120 LLYVARNIASSFATVH-EHGHVVGDVNQNSFMVGRDSKVVLIDSDS  164 (648)
Q Consensus       120 ~~~~~~qi~~aL~~lH-~~givHRDiKP~NIll~~~g~vkL~DFG~  164 (648)
                      ...++..+.+.+...- ...+||.|+.|+|||++ ++.+.||||..
T Consensus       176 ~~~~~~~l~~~l~~~~~~p~LiHGDl~~gNvl~~-~~~~~iiDp~~  220 (296)
T c3jr1A_         176 IDLIVQIVADTLSKHNPKPSILHGNLWIENCIQV-DDKIFVCNPAC  220 (296)
T ss_dssp             HHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEE-TTEEEECSCCC
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEE-CCEEEEECCHH
T ss_conf             9999999997442157885898344635516998-89699981410