6 c1koaA_ Probab=100.00  E-value=0  Score=351.83  Aligned_columns=245  Identities=18%

Q ss_pred             EEEEEEEEECCCEEEEEEEE---CCEEEEEEECHHHCCCHHH---HHHHHHHHCCHHHHHHCCCCEEEEEECCCCCEEEE
Q ss_conf             99988861018758999972---7089999876021827899---99999971106565114881799970277986899
Q batch____        15 TTLGRELGKGGEGAVYDIEE---FVDSVAKIYHTPPPALKQD---KLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGF   88 (648)
Q Consensus        15 ~~l~~~lG~Gg~G~Vy~a~~---~~~vA~K~~~~~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   88 (648)
                      |++.+.||+|+||+||+|+|   ++.||+|++......+.+.   |+.+|+.++|+||+++       ++.+.+++.+||
T Consensus        28 y~~~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~~Ei~~l~~l~hpnIv~~-------~~~~~~~~~~~i  100 (447)
T c1koaA_          28 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL-------HDAFEDDNEMVM  100 (447)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCE-------EEEEEETTEEEE
T ss_pred             EEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEE-------EEEEEECCEEEE
T ss_conf             7999998642884999999988984999999817998899999999999984698966018-------999987998999


Q ss_pred             EEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCC--CEEEEEECCCCC
Q ss_conf             984789898899987100101466789989999999999999999986794444789687788799--838997457622
Q batch____        89 MMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRD--SKVVLIDSDSFQ  166 (648)
Q Consensus        89 vmE~~~G~~L~~~l~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHRDiKP~NIll~~~--g~vkL~DFG~a~  166 (648)
                      |||||+|++|.+.+.....      .+++.+++.++.||+.||.|+|..||+||||||+|||++.+  +.+|++|||++.
T Consensus       101 v~E~~~~g~l~~~~~~~~~------~l~e~~~~~~~~qi~~~l~~lh~~~i~H~dikp~Nil~~~~~~~~~~~~dfg~~~  174 (447)
T c1koaA_         101 IYEFMSGGELFEKVADEHN------KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA  174 (447)
T ss_dssp             EECCCCSCBHHHHHTCTTS------CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCE
T ss_pred             EEECCCCCCHHHHHHCCCC------CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf             9976778842344430267------8898999988899998754310253011035543046611565332000112101


Q ss_pred             CCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             36898733466655212755771865347888885675889999999999659999898871014678886552011122
Q batch____       167 INANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITHFRYA  246 (648)
Q Consensus       167 ~~~~~~~~~~~~Gtp~~~tpe~~ape~~~g~~~~~~sDiyslGv~lye~L~~G~~Pf~g~~~~~~~~~~~~~~~~~~~~~  246 (648)
                      ............||+.|++||+     +.+..++.++|||||||++|||| +|++||.+.+.......+...        
T Consensus       175 ~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~DiwSlG~ily~ll-~g~~Pf~~~~~~~~~~~i~~~--------  240 (447)
T c1koaA_         175 HLDPKQSVKVTTGTAEFAAPEV-----AEGKPVGYYTDMWSVGVLSYILL-SGLSPFGGENDDETLRNVKSC--------  240 (447)
T ss_dssp             ECCTTSCEEEECSCTTTCCHHH-----HHTCCBCHHHHHHHHHHHHHHHH-HSSCSSCCSSHHHHHHHHHHT--------
T ss_pred             CCCCCCCEEECCCCCCCCCHHH-----HHCCCCCCHHHHHHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHCC--------
T ss_conf             2576530000278612488789-----82799970368999999999998-288998988989999999808--------


Q ss_pred             CCCCHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHH
Q ss_conf             2110000023687544894657999999999871899894658998999998
Q batch____       247 YASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAA  298 (648)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~~~p~~rps~~~~~~~  298 (648)
                                ...........++..+.+++.+||.+|  |..|+|+.+++.+
T Consensus       241 ----------~~~~~~~~~~~~s~~~~dli~~~L~~d--p~~R~t~~e~l~h  280 (447)
T c1koaA_         241 ----------DWNMDDSAFSGISEDGKDFIRKLLLAD--PNTRMTIHQALEH  280 (447)
T ss_dssp             ----------CCCSCCGGGGGCCHHHHHHHHHHCCSS--GGGSCCHHHHHHS
T ss_pred             ----------CCCCCCCCCCCCCHHHHHHHHHHCCCC--HHHCCCHHHHHHH
T ss_conf             ----------998654444478999999888633379--4458587998500