137 d1pjra1 Probab=98.60   E-value=7.9e-06  Score=51.87  Aligned_columns=174  Identities=12%

Q ss_pred             CHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCC--EEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             658888751114798799980888887899999999998547998--299981638999999999999998527886199
Q batch____       294 RQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIAD--SVIFALPTQATANAMLTRMEASASHLFSSPNLI  371 (888)
Q Consensus       294 ~~~q~~~~~~~~~~~~~ii~aPTGsGKT~aal~~a~~l~~~~~~~--rii~~lPt~al~~q~~~r~~~~~~~~~~~~~v~  371 (888)
                      ++-|..+....  .+.++|.+|-|+|||.+++..+..++..++.+  +|+++.|+..+++++.+++.+..........+.
T Consensus        13 ~~~Q~~~I~~~--~~~~lI~G~pGTGKT~~l~~~i~~ll~~~~~~~~~iL~lt~s~~a~~~~~~r~~~~~~~~~~~~~~~   90 (315)
T d1pjra1          13 NKEQQEAVRTT--EGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAEDVWIS   90 (315)
T ss_dssp             CHHHHHHHHCC--SSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHHGGGGTTSEEE
T ss_pred             CHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEC
T ss_conf             89999999668--9978998389987879999999999980899976777871698999989887887511334663021


Q ss_pred             EEECCCCCHHHHHHHHHHCCCCC------------------------------------------------CCCCHHHHH
Q ss_conf             98477520257777653123566------------------------------------------------652023455
Q batch____       372 LAHGNSRFNHLFQSIKSRAITEQ------------------------------------------------GQEEAWVQC  403 (888)
Q Consensus       372 l~h~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~  403 (888)
                      ..|+-..................                                                .........
T Consensus        91 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (315)
T d1pjra1          91 TFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRYYEKVV  170 (315)
T ss_dssp             EHHHHHHHHHHHHGGGGTCCTTCEECCHHHHHHHHHHHHHTTSCTTTTCCHHHHHHHHHHHHHTTCCHHHHTTCCHHHHH
T ss_pred             CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             29999999977647861876664326958999999999874277722267899999999998612796675554544333


Q ss_pred             HHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHH-HHHCCCCEEECCCCCCCCHHHHHHHHHHH
Q ss_conf             6643234543014988995889999987237730356-64102552550650127878899999999
Q batch____       404 CQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIR-GLGIGRSVLIVDEVHAYDTYMNGLLEAVL  469 (888)
Q Consensus       404 ~~~~~~~~~~~~~a~i~VtT~dqll~~~~~~~~~~~r-~~~l~~~vvilDEvh~~~~~~~~~l~~~l  469 (888)
                      ..+.................-.......+-.....+. .......+|++||+|.+.+.....+..+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vDe~Qd~~~~q~~ll~~l~  237 (315)
T d1pjra1         171 SDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLA  237 (315)
T ss_dssp             HHHHHHHHHHHHHTTEECTTHHHHHHHHHHHHCHHHHHHHHHHCSEEEESSGGGCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCHHHHHHHHHHH
T ss_conf             3211235677653045663689999999963289999851024835620135409989999999972