36 c2fsgA_ Probab=99.98   E-value=1.1e-30  Score=199.78  Aligned_columns=320  Identities=17%

Q ss_pred             HHHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC
Q ss_conf             65430026565888875111479879998088888789999999999854799829998163899999999999999852
Q batch____       285 ALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHL  364 (888)
Q Consensus       285 ~~~~~~~~~~~~q~~~~~~~~~~~~~ii~aPTGsGKT~aal~~a~~l~~~~~~~rii~~lPt~al~~q~~~r~~~~~~~~  364 (888)
                      ..+..+.+|++.|-...-....+.  +.+++||+|||+++++++...+..|  +++.++.||+.|+.|.++.+..+++.+
T Consensus        60 ~~r~~g~~p~~vQli~~~~l~~G~--Iae~~TGeGKTLa~~LPa~l~aL~G--~~V~Ivtpt~~LA~qd~e~~~~~~~~l  135 (679)
T c2fsgA_          60 SKRVFGXRHFDVQLLGGXVLNERC--IAEXRTGEGKTLTATLPAYLNALTG--KGVHVVTVNDYLAQRDAENNRPLFEFL  135 (679)
T ss_dssp             HHHHHSCCCCHHHHHHHHHTTSSE--EEECCTTSCHHHHTHHHHHHHHTTS--SCCEEEESSHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHCCCCCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf             766508888636999999850798--8897899857899999999997169--943998059899999999999999773


Q ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH--CCCCHHHHHH
Q ss_conf             78861999847752025777765312356665202345566432345430149889958899999872--3773035664
Q batch____       365 FSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVL--PVKHRFIRGL  442 (888)
Q Consensus       365 ~~~~~v~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~VtT~dqll~~~~--~~~~~~~r~~  442 (888)
                      +  ..++...|.....+......                             ++|+++|+..+....+  ..........
T Consensus       136 G--l~v~~i~g~~~~~er~~~y~-----------------------------~dIvy~Tp~~l~~D~Lrd~~~~~~~~~~  184 (679)
T c2fsgA_         136 G--LTVGINLPGXPAPAKREAYA-----------------------------ADITYGTNNEYGFDYLRDNXAFSPEERV  184 (679)
T ss_dssp             T--CCEEECCTTCCHHHHHHHHH-----------------------------SSEEEEEHHHHHHHHHHHTTCSSGGGCC
T ss_pred             C--CEEEEEECCCCHHHHHHHHC-----------------------------CCCEEECHHHHHHHHHHHHHCCCCCCCC
T ss_conf             9--45999708999899998614-----------------------------9917831799999985211002201133


Q ss_pred             HCCCCEEECCCCCCC--CHHHHHHHHHH---------HHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             102552550650127--87889999999---------9998861998999966899899999986305664124566777
Q batch____       443 GIGRSVLIVDEVHAY--DTYMNGLLEAV---------LKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAY  511 (888)
Q Consensus       443 ~l~~~vvilDEvh~~--~~~~~~~l~~~---------l~~l~~~~~~~illSATlp~~~~~~l~~~~~~~~~~~~~~~~~  511 (888)
                      .-...++|+||+|.+  +.....++...         ...+-..-.++++||||+|.. .+.+...|+.....+....+.
T Consensus       185 l~~~~~~IiDEaD~mL~de~~~plii~g~~~~la~It~q~~~~~y~kl~g~SaT~~~e-~~el~~~y~~~~v~Ipt~~~~  263 (679)
T c2fsgA_         185 QRKLHYALVDEVDSILIDEARTPLIISGPNQTLASITFQNYFRLYEKLAGXTGTADTE-AFEFSSIYKLDTVVVPTNRPX  263 (679)
T ss_dssp             CCCCCEEEESCHHHHTTTTTTCEEEEEECCEEEEEEEHHHHHTTSSEEEEEECSCCCC-HHHHHHHHCCEEEECCCSSCC
T ss_pred             CCCCCEEEEECCHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCHH-HHHHHHHHCCCEEEECCCCCC
T ss_conf             2456578732101433023455303139589998522564367320334014556735-899998617870770377653


Q ss_pred             CCHHEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHC
Q ss_conf             52000012333323211233212345113565411566699899999999996429939998186899999999999836
Q batch____       512 PLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPICLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELN  591 (888)
Q Consensus       512 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~vlvi~ntv~~A~~l~~~L~~~~  591 (888)
                      .                         ..................+.+.+.+....|.++||||||++.++.++..|+.. 
T Consensus       264 ~-------------------------~~~~~~~i~~~~~~k~~ai~~~i~~~~~~g~pVLVft~s~~~se~l~~~L~~~-  317 (679)
T c2fsgA_         264 I-------------------------RKDLPDLVYXTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKA-  317 (679)
T ss_dssp             C-------------------------CEECCCEEESSHHHHHHHHHHHHHHHHHTTCCEEEEESSHHHHHHHHHHHHHT-
T ss_pred             C-------------------------CCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-
T ss_conf             2-------------------------12344202117178999999999999750894899968989999999999967-


Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCCCCC------------------------
Q ss_conf             88883899627799999999999999974203556870699860477631777857------------------------
Q batch____       592 NTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVDFD------------------------  647 (888)
Q Consensus       592 ~~~~~v~llhs~~~~~dR~~~e~~i~~~~~~~~~~~~~~ilVaTqviE~GvDid~d------------------------  647 (888)
                        +.++.++|+.+...+|..+.+..          ..+.|+|||.++..|+||..-                        
T Consensus       318 --gi~~~vLn~~~~~~E~e~i~~a~----------~~g~VlIATn~AgRG~DI~l~~~~~~~~~~~~~~~~~~~~~~~~~  385 (679)
T c2fsgA_         318 --GIKHNVLNAKFHANEAAIVAQAG----------YPAAVTIATNXAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKAD  385 (679)
T ss_dssp             --TCCCEECCTTCHHHHHHHHHTTT----------STTCEEEEESCCTTCCCCCTTCCSHHHHTTCSSCCTHHHHHHHHH
T ss_pred             --CCEEEEECCCCCHHHHHHHHHCC----------CCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf             --99069845857888899999628----------998489985686565201047651111111221012333210244


Q ss_pred             --------------EEEECCCCHHHHH--HHHHHCCCCCCCCCCCCC
Q ss_conf             --------------6885189998999--987531656777776632
Q batch____       648 --------------WLITQHCPADLLF--QRLGRLHRHHRKYRPAGF  678 (888)
Q Consensus       648 --------------~vi~~~ap~dsli--Qr~GR~~R~~~~~~~~~~  678 (888)
                                    .||-...|-..=+  |..||++|.|..+....+
T Consensus       386 ~~~~~~~V~~~gGL~VI~Te~~es~Rid~Ql~GRagRqG~pG~s~~~  432 (679)
T c2fsgA_         386 WQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFY  432 (679)
T ss_dssp             HHHHHHHHHHTTSEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEE
T ss_pred             CCCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             44471558732983998023672178878987786420275622788