46 c1tf2A_ Probab=99.95   E-value=4.1e-25  Score=166.65  Aligned_columns=320  Identities=18%

Q ss_pred             HHHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC
Q ss_conf             65430026565888875111479879998088888789999999999854799829998163899999999999999852
Q batch____       285 ALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHL  364 (888)
Q Consensus       285 ~~~~~~~~~~~~q~~~~~~~~~~~~~ii~aPTGsGKT~aal~~a~~l~~~~~~~rii~~lPt~al~~q~~~r~~~~~~~~  364 (888)
                      ..+..+.+|++.|-...-....+.  +.++.||+|||+++.+++...+..|  +++.++.|+.-|+.|.++.+..+++.+
T Consensus        68 ~~R~~g~rp~~vQ~i~~~~L~~G~--Iaem~TGeGKTL~~~Lpa~l~aL~G--~~V~IvT~n~yLA~RD~e~~~~l~~~L  143 (772)
T c1tf2A_          68 SRRVTGMFPFKVQLMGGVALHDGN--IAEMKTGEGKTLTSTLPVYLNALTG--KGVHVVTVNEYLASRDAEQMGKIFEFL  143 (772)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHTTS--EEECCTTSCHHHHHHHHHHHHHTTS--SCEEEEESSHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHCCCCCCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf             987508888737999999984898--8999789876899999999997179--952998269899999999999998673


Q ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHH--HH
Q ss_conf             7886199984775202577776531235666520234556643234543014988995889999987237730356--64
Q batch____       365 FSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIR--GL  442 (888)
Q Consensus       365 ~~~~~v~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~VtT~dqll~~~~~~~~~~~r--~~  442 (888)
                      +  ..++..+|..                             ....++....++|+++|+.++-.-.+......-+  +.
T Consensus       144 G--L~v~~i~~~~-----------------------------~~~~r~~~y~~dI~y~T~~~l~fD~Lrd~~~~~~~~lv  192 (772)
T c1tf2A_         144 G--LTVGLNLNSM-----------------------------SKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMV  192 (772)
T ss_dssp             T--CCEEECCTTC-----------------------------CHHHHHHHTTSSEEEEEHHHHHHHHHHHTTCSSGGGCC
T ss_pred             C--CEEEEEECCC-----------------------------CHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCC
T ss_conf             9--5489850899-----------------------------98999984149969963899888787875312500001


Q ss_pred             HCCCCEEECCCCCCC-----------------------------------------------------------------
Q ss_conf             102552550650127-----------------------------------------------------------------
Q batch____       443 GIGRSVLIVDEVHAY-----------------------------------------------------------------  457 (888)
Q Consensus       443 ~l~~~vvilDEvh~~-----------------------------------------------------------------  457 (888)
                      .-...++|+||++.+                                                                 
T Consensus       193 ~r~~~~~IiDEvDsiLiDea~tpliisg~~~~~~~~y~~~~~iv~~L~~~~~~~~d~~~~~v~lt~~g~~~~e~~~~~~~  272 (772)
T c1tf2A_         193 QRPLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKAVQLTEEGMTKAEKAFGIDN  272 (772)
T ss_dssp             CCCCCEEEEETHHHHHTTSTTCEEEEECSSCCCCHHHHHHHHHHTTCCSSSSEEECSSSCCEEECHHHHHHHHHHTTCSC
T ss_pred             CCCCCEEEEHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEEECHHHHHHHHHHCCCCC
T ss_conf             36786676011567766304562000377754002899999999850135772020145257987678999997618543


Q ss_pred             --CHHHHHHHHHHHHHHHHCCC----------------------------------------------------------
Q ss_conf             --87889999999999886199----------------------------------------------------------
Q batch____       458 --DTYMNGLLEAVLKAQADVGG----------------------------------------------------------  477 (888)
Q Consensus       458 --~~~~~~~l~~~l~~l~~~~~----------------------------------------------------------  477 (888)
                        +......+..+-..+.....                                                          
T Consensus       273 l~~~~~~~~~~~i~~al~A~~l~~~d~~YiV~~~~I~ivd~~tgr~~~~r~~~~glhQ~ieake~v~i~~e~~t~asis~  352 (772)
T c1tf2A_         273 LFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITF  352 (772)
T ss_dssp             SSSGGGHHHHHHHHHHHHHHHTCCBTTTEEEETTEEEEBCTTTCCBCTTCCCTTTHHHHHHHHTTCCCCCCCCEEEEEEH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf             35722334889999999998862178642853893888316578534564210247899998737847854311220004


Q ss_pred             --------CEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf             --------899996689989999998630566412456677752000012333323211233212345113565411566
Q batch____       478 --------SVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPICLAD  549 (888)
Q Consensus       478 --------~~illSATlp~~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  549 (888)
                              ++.+||.|+.. ...++...|+.....++..                         ....+......+....
T Consensus       353 q~~f~~Y~kl~GmTGTa~t-e~~e~~~~Y~l~vv~IPt~-------------------------k~~~r~~~~d~i~~~~  406 (772)
T c1tf2A_         353 QNYFRMYEKLAGMTGTAKT-EEEEFRNIYNMQVVTIPTN-------------------------RPVVRDDRPDLIYRTM  406 (772)
T ss_dssp             HHHHTTSSEEEEEESCCGG-GHHHHHHHHCCCEEECCCS-------------------------SCCCCEECCCEEESSH
T ss_pred             HHHHHHHHHHHCCCCCHHH-HHHHHHHHHCCCEEEECCC-------------------------CCHHHCCCCCEEEECH
T ss_conf             6787533554145654277-9999998719846982787-------------------------6110013476164488


Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             69989999999999642993999818689999999999983688883899627799999999999999974203556870
Q batch____       550 MLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVG  629 (888)
Q Consensus       550 ~~~~~~~~~~i~~~~~~g~~vlvi~ntv~~A~~l~~~L~~~~~~~~~v~llhs~~~~~dR~~~e~~i~~~~~~~~~~~~~  629 (888)
                      ......+.+.+.+....|.+|||||+++..++.+++.|...   +.+..++|+.....++..+.+          .-..+
T Consensus       407 ~~K~~aI~~~i~~~~~~grpVLVft~si~~se~ls~~L~~~---gi~~~vLna~~~~~E~~ii~~----------Ag~~g  473 (772)
T c1tf2A_         407 EGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNK---GIPHQVLNAKNHEREAQIIEE----------AGQKG  473 (772)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHHTT---TCCCEEECSSSHHHHHHHHHT----------SSSTT
T ss_pred             HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHC---CCCEEEECCCCCHHHHHHHHH----------CCCCC
T ss_conf             99999999999998630891899962389999999999866---991699616755368899984----------27998


Q ss_pred             EEEEECHHHHHCCCC----CCC-----EEEECCCC--HHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             699860477631777----857-----68851899--98999987531656777776632
Q batch____       630 RILVATQVVEQSLDV----DFD-----WLITQHCP--ADLLFQRLGRLHRHHRKYRPAGF  678 (888)
Q Consensus       630 ~ilVaTqviE~GvDi----d~d-----~vi~~~ap--~dsliQr~GR~~R~~~~~~~~~~  678 (888)
                      .|.|||.++..|+||    ...     .||...-|  ..--.|..||++|.|..+....+
T Consensus       474 ~VtIATnmAGRGtDI~l~~~V~~~GGLhVI~t~~~~s~rid~Ql~GRagRqGdpGss~~~  533 (772)
T c1tf2A_         474 AVTIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFY  533 (772)
T ss_dssp             CEEEEETTSSTTCCCCCCTTCGGGTSEEEEESSCCSSHHHHHHHHTTSSCSSCCEEEEEE
T ss_pred             CEEEEHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf             389870132068676357237731982899514886678898865344205788717999