6 c1gm5A_ Probab=100.00  E-value=3.2e-43  Score=274.34  Aligned_columns=339  Identities=19%

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC-CCCCHHHHHHHH------CCCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf             99999999998875426443434301257654300-265658888751------11479879998088888789999999
Q batch____       256 YFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNG-YQPRQLQVLVDA------LPVAPGLTVIEAPTGSGKTETALAYA  328 (888)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~------~~~~~~~~ii~aPTGsGKT~aal~~a  328 (888)
                      +++...........................+.... |.+++.|..+.+      ....|...+|.+|||||||++|+.++
T Consensus       325 ~~q~~l~~~r~~~~~~~~~~~~~~~~~~~~f~~~lpF~LT~~Q~~ai~eI~~dl~~~~~m~rLLqgdtGSGKT~Va~lai  404 (729)
T c1gm5A_         325 VLQLAFQKIRKEREKHGGIPKKIEGKLAEEFIKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAI  404 (729)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCCCCCTHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf             99999999999766524966488806899899857899898999999999998635897306775047872158999999


Q ss_pred             HHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             99985479982999816389999999999999985278861999847752025777765312356665202345566432
Q batch____       329 WKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLS  408 (888)
Q Consensus       329 ~~l~~~~~~~rii~~lPt~al~~q~~~r~~~~~~~~~~~~~v~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (888)
                      +....+|  .+++|++||++|++|+++++++++...+  ..+.+.||.....+............               
T Consensus       405 l~ai~~G--~qvlilaPTr~LA~Q~~~~l~~~~~~~g--i~V~lltG~~~~~~r~~~~~~i~~g~---------------  465 (729)
T c1gm5A_         405 LDNYEAG--FQTAFMVPTSILAIQHYRRTVESFSKFN--IHVALLIGATTPSEKEKIKSGLRNGQ---------------  465 (729)
T ss_dssp             HHHHHHT--SCEEEECSCHHHHHHHHHHHHHHHTCSS--CCEEECCSSSCHHHHHHHHHHHHSSC---------------
T ss_pred             HHHHHCC--CEEEEEECCHHHHHHHHHHHHHHHCCCC--CEEEEEECCCCHHHHHHHHHHHHCCC---------------
T ss_conf             9999659--8099990769999999999999604159--74999988998889999998650379---------------


Q ss_pred             HHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC-C
Q ss_conf             345430149889958899999872377303566410255255065012787889999999999886199899996689-9
Q batch____       409 QSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATL-P  487 (888)
Q Consensus       409 ~~~~~~~~a~i~VtT~dqll~~~~~~~~~~~r~~~l~~~vvilDEvh~~~~~~~~~l~~~l~~l~~~~~~~illSATl-p  487 (888)
                              ++|+|||+..+...+.          .-..++||+||+|.+.....          .....++++||||+ |
T Consensus       466 --------~~IvVgT~~lL~~~v~----------~~~l~lvVIDEaHrf~~l~~----------~~~~~~iL~lSATPip  517 (729)
T c1gm5A_         466 --------IDVVIGTHALIQEDVH----------FKNLGLVIIDEQHRFEALMN----------KGKMVDTLVMSATPIP  517 (729)
T ss_dssp             --------CCEEEECTTHHHHCCC----------CSCCCEEEEESCCCCCCCCS----------SSSCCCEEEEESSCCC
T ss_pred             --------CCEEEEHHHHHHHHCC----------CCCCCEEECCCHHHHHHHHH----------CCCCCCEEEEECCCCH
T ss_conf             --------7489851778873014----------11366786061688899986----------3998869999458998


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             89999998630566412456677752000012333323211233212345113565411566699899999999996429
Q batch____       488 MKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPICLADMLPDLTMLERMIAAANAG  567 (888)
Q Consensus       488 ~~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g  567 (888)
                      ......+............+....+..+.....                              .....+++.+.+.+.+|
T Consensus       518 rtla~~~~g~~~~s~i~e~p~~r~~i~t~v~~~------------------------------~~~~~l~~~I~~~l~~g  567 (729)
T c1gm5A_         518 RSMALAFYGDLDVTVIDEMPPGRKEVQTMLVPM------------------------------DRVNEVYEFVRQEVMRG  567 (729)
T ss_dssp             HHHHHHHTCCSSCEEECCCCSSCCCCEECCCCS------------------------------STHHHHHHHHHHHTTTS
T ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEC------------------------------CCHHHHHHHHHHHHHCC
T ss_conf             999999728963699720588777726999722------------------------------21799999999985469


Q ss_pred             CCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCCC-C
Q ss_conf             939998186899999999999836888838996277999999999999999742035568706998604776317778-5
Q batch____       568 AQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVD-F  646 (888)
Q Consensus       568 ~~vlvi~ntv~~A~~l~~~L~~~~~~~~~v~llhs~~~~~dR~~~e~~i~~~~~~~~~~~~~~ilVaTqviE~GvDid-~  646 (888)
                      ++++||||+++.|+++++.|++.   +..+.++||+|++.+|.++++++        ++|+..|||||+++|+||||+ +
T Consensus       568 ~qvLVF~~ti~~ae~la~~L~~~---g~~v~~lHG~ls~~eR~~il~~F--------r~Gei~VLVATtvie~GIDvPnv  636 (729)
T c1gm5A_         568 GQAFIVYPLIKSAVEMYEYLSKE---VFKLGLMHGRLSQEEKDRVMLEF--------AEGRYDILVSTTVIEVGIDVPRA  636 (729)
T ss_dssp             CCBCCBCCCCCHHHHHHHSGGGS---CCCBCCCCSSSCCSCSHHHHHHH--------TTTSSSBCCCSSCCCSCSCCTTC
T ss_pred             CCEEEEECCHHHHHHHHHHHHHC---CCCEEEEECCCCHHHHHHHHHHH--------HCCCCCEEEEHHHHHHCCCCCCC
T ss_conf             93899948989999999999853---99789996899989999999999--------76999899992275503787866


Q ss_pred             CEEEECCCC---HHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             768851899---989999875316567777766322452
Q batch____       647 DWLITQHCP---ADLLFQRLGRLHRHHRKYRPAGFEIPV  682 (888)
Q Consensus       647 d~vi~~~ap---~dsliQr~GR~~R~~~~~~~~~~~~~~  682 (888)
                      ++||...++   +.++.|.+||++|.+..+....+..+.
T Consensus       637 t~vVi~~a~rfglsqLhQlrGRvGR~~~~g~ciL~~~~~  675 (729)
T c1gm5A_         637 NVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDV  675 (729)
T ss_dssp             CEEEBCSCSSSCTTHHHHHHHTSCCSSTTCEEECCCCSC
T ss_pred             CEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCC
T ss_conf             479985787479978766530344579814999995699