30 c1s2mA_ Probab=100.00  E-value=2.1e-29  Score=192.12  Aligned_columns=328  Identities=15%

Q ss_pred             HHHHHHHCC-CCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC-CCCEEEEECCHHHHHHHHHHHHHHH
Q ss_conf             576543002-65658888751114798799980888887899999999998547-9982999816389999999999999
Q batch____       283 VHALLDNGY-QPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQ-IADSVIFALPTQATANAMLTRMEAS  360 (888)
Q Consensus       283 ~~~~~~~~~-~~~~~q~~~~~~~~~~~~~ii~aPTGsGKT~aal~~a~~l~~~~-~~~rii~~lPt~al~~q~~~r~~~~  360 (888)
                      ...+...++ .++|+|..+......+..++|.||||+|||++++++++..+.+. ...+++|++|++++++|++++++++
T Consensus        13 ~~~l~~~g~~~~~~~Q~~ai~~il~~~~vii~apTGsGKT~~~~l~~l~~l~~~~~~~~~iii~p~~~l~~q~~~~~~~l   92 (377)
T c1s2mA_          13 LMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTL   92 (377)
T ss_dssp             HHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHH
T ss_conf             99999777998798999999999759989999279986789999999999850468828999847389879999999997


Q ss_pred             HHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHH
Q ss_conf             98527886199984775202577776531235666520234556643234543014988995889999987237730356
Q batch____       361 ASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIR  440 (888)
Q Consensus       361 ~~~~~~~~~v~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~VtT~dqll~~~~~~~~~~~r  440 (888)
                      ..  .....+...++..............                           ..+.++++..++..........  
T Consensus        93 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~l--  141 (377)
T c1s2mA_          93 GK--HCGISCMVTTGGTNLRDDILRLNET---------------------------VHILVGTPGRVLDLASRKVADL--  141 (377)
T ss_dssp             TT--TTTCCEEEECSSSCHHHHHHHTTSC---------------------------CSEEEECHHHHHHHHHTTCSCC--
T ss_pred             HH--HCCCCEEEEEECCCHHHHHHHHCCC---------------------------CCEEEEEHHHHHHHHHHHHCCC--
T ss_conf             31--0377159998178737877752035---------------------------7502320388876432000001--


Q ss_pred             HHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCC
Q ss_conf             64102552550650127878899999999998861998999966899899999986305664124566777520000123
Q batch____       441 GLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVN  520 (888)
Q Consensus       441 ~~~l~~~vvilDEvh~~~~~~~~~l~~~l~~l~~~~~~~illSATlp~~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~  520 (888)
                         .....+++||.|.+......................+..++|.+..........................       
T Consensus       142 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  211 (377)
T c1s2mA_         142 ---SDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTLK-------  211 (377)
T ss_dssp             ---TTCCEEEEESHHHHSSHHHHHHHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEESCCSSCBCT-------
T ss_pred             ---CEEEEEEECCCEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCC-------
T ss_conf             ---1000222022024413322102345664114575056311212200246665215665147640135655-------


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             33323211233212345113565411566699899999999996429939998186899999999999836888838996
Q batch____       521 GAQRFDLLAHPEQLPPRFSIQPEPICLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLF  600 (888)
Q Consensus       521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~vlvi~ntv~~A~~l~~~L~~~~~~~~~v~ll  600 (888)
                                          .............................+++++++...+...+......   ...+..+
T Consensus       212 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  268 (377)
T c1s2mA_         212 --------------------GITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDL---GYSCYYS  268 (377)
T ss_dssp             --------------------TEEEEEEECCGGGHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHH---TCCEEEE
T ss_pred             --------------------CCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHC---CCCCCCC
T ss_conf             --------------------52599997060355678874200134522688623011246778754210---1332222


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCCC-CCEEEECCCC--HHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             277999999999999999742035568706998604776317778-5768851899--9899998753165677777663
Q batch____       601 HARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVD-FDWLITQHCP--ADLLFQRLGRLHRHHRKYRPAG  677 (888)
Q Consensus       601 hs~~~~~dR~~~e~~i~~~~~~~~~~~~~~ilVaTqviE~GvDid-~d~vi~~~ap--~dsliQr~GR~~R~~~~~~~~~  677 (888)
                      |+.....+|.......        ..+...|+|||++++.|+|++ .++||....|  +++++||+||++|.|+.+....
T Consensus       269 ~~~~~~~~~~~~~~~~--------~~~~~~vlv~T~~~~~GiDip~v~~VI~~~~p~s~~~~~Qr~GRagR~g~~g~~i~  340 (377)
T c1s2mA_         269 HARMKQQERNKVFHEF--------RQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAIN  340 (377)
T ss_dssp             CTTSCHHHHHHHHHHH--------HTTSSSEEEESSCSSSSCCCTTEEEEEESSCCSSHHHHHHHHCBSSCTTCCEEEEE
T ss_pred             CCCCCHHHHHCCCCCC--------CCCCEEEEEECCCHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEE
T ss_conf             4564201210000001--------12211343102301123564676389980888799899886210236888259999


Q ss_pred             CCCCC
Q ss_conf             22452
Q batch____       678 FEIPV  682 (888)
Q Consensus       678 ~~~~~  682 (888)
                      +..+.
T Consensus       341 ~~~~~  345 (377)
T c1s2mA_         341 LINWN  345 (377)
T ss_dssp             EECGG
T ss_pred             EECHH
T ss_conf             87888


