Phyre 2 alignment of P38036 with c1ly1A_

Return to main results | Retrieve Phyre Job Id

Job Description | P38036
Confidence | 89.51% | Date | Thu Jan 5 11:57:49 GMT 2012
Rank | 405 | Aligned Residues | 24
% Identity | 25% | Template | c1ly1A_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:polynucleotide kinase; | PDBTitle: structure and mechanism of t4 polynucleotide kinase
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | G | L | T | V | I | E | A | P | T | G | S | G | K | T | E | T | A | L | A | Y | A | W | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | K | I | I | L | T | I | G | C | P | G | S | G | K | S | T | W | A | R | E | F | I | A | K
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions