212 c1qapA_ Probab=86.58   E-value=2.3  Score=21.62  Aligned_columns=116  Identities=16%

Q ss_pred             CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCC-CHHHHHHHHHHHHHCC--CEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             4799999999997299899987212587334789-9899999999999869--889998276369889999999999998
Q batch____        13 PARDAAIAREAILHGADAVYIGGPGFGARHNASN-SLKDIAELVPFAHRYG--AKIFVTLNTILHDDELEPAQRLITDLY   89 (653)
Q Consensus        13 PaGs~e~l~aAi~~GADaVYlG~~~f~aR~~a~n-~~eeL~eav~~ah~~g--~kvyvtlNtl~~~~El~~~~~~l~~l~   89 (653)
                      |.-..-..+|+...|++.-=+|...+-+=.-.-- +...+.++++.++...  .++-|-+-++          +-+....
T Consensus       149 Pg~r~~~~~Av~~GG~~~hR~~L~d~ilik~nHi~~~g~~~~av~~~r~~~p~~~I~Vevdt~----------eea~eA~  218 (289)
T c1qapA_         149 PGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENL----------DELDDAL  218 (289)
T ss_dssp             TTCHHHHHHHHHHHTCBCCCSSSSSCEEECHHHHHHHSSHHHHHHHHHHHSTTSCEEEEESSH----------HHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCH----------HHHHHHH
T ss_conf             438999999987269521000012111122035663151899999999858998299996698----------9999998


Q ss_pred             HCCCCEEEECCHH------HHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             4799899982989------998852799699971413188999999998799799987
Q batch____        90 QTGVDALIVQDMG------ILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLA  141 (653)
Q Consensus        90 ~~GvDavIVqD~G------vl~l~~p~l~iHaStqm~v~N~~~v~fl~~lG~~RVvLa  141 (653)
                      ++|+|.|...++.      .++.+.|+++|-+|-..   |.+.+.-+.+.|++.+..+
T Consensus       219 ~~gad~I~LD~~~~~~lk~~v~~i~~~v~I~aSGGI---~~~ni~~~a~~GvD~i~vG  273 (289)
T c1qapA_         219 KAGADIIMLDNFNTDQMREAVKRVNGQARLEVSGNV---TAETLREFAETGVDFISVG  273 (289)
T ss_dssp             HTTCSEEEESSCCHHHHHHHHHTTCTTCCEEECCCS---CHHHHHHHHHTTCSEEECS
T ss_pred             HCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCC---CHHHHHHHHHCCCCEEEEC
T ss_conf             559989998699989999999962887469998899---9899999995799899982