115 c3fotA_ Probab=43.50   E-value=22  Score=15.41  Aligned_columns=182  Identities=15%

Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCC--------------CCEEEEEECCCCEE
Q ss_conf             9999987654543385246789999999999984761049998882698687--------------77899998699649
Q batch____       215 DLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNY--------------FDVSMAVSTPRGLV  280 (405)
Q Consensus       215 ~~r~~~~~~~~~~~~~k~t~~~~~~ka~a~al~~~P~~na~~~~~~i~~~~~--------------vnigiAv~~~~GL~  280 (405)
                      +..+.+.+..++.....+|+++++.-|++.+|.++-.-....-+-.+....+              .--...+..--|.+
T Consensus       277 ~~t~~l~~~~k~~~~~g~t~~~~~~AA~~~~l~~~~~~~d~~~~~~~~~~gR~~l~~p~~~~~~~~~~~~~~~~~~~g~~  356 (505)
T c3fotA_         277 DESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRIENLKS  356 (505)
T ss_dssp             HHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf             89999999886521575579999999999998753488844898520005852347544444333444444310331133


Q ss_pred             EEEECCCCCC----CHHHHHHHHHHHHHHHHCCCCCHHHHCC-------------------CEEEEECCCCCCCCCCCCC
Q ss_conf             5032175207----9999999999999999848988889388-------------------6199972734262001031
Q batch____       281 TPVLRDVDTL----GMADIEKKIKELAVKGRDGKLTVEDLTG-------------------GNFTITNGGVFGSLMSTPI  337 (405)
Q Consensus       281 vPvi~~a~~~----sl~eia~~~~~l~~kar~~~L~~~d~~g-------------------gtftisnlG~~G~~~~~pi  337 (405)
                      ++++.--.+.    ++.++++.+++...++-..........-                   .++.++++|.+.-....-.
T Consensus       357 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~g~~e~~~~~~~  436 (505)
T c3fotA_         357 ITVSHKDEKELQVRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEGEANPLFISDGINERFIPHEI  436 (505)
T ss_dssp             GCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCSBCCCEEEEEEEGGGTSCSEE
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHEECCCCCCC
T ss_conf             10124565558422189999999999885225752011233212244653033456765666622311001000234333


Q ss_pred             CC-CCCEEEEEECCCEEEEEEECCEEEEE-----EEEEEEEEECCCEECHHHHHHHHHHHHHHHH
Q ss_conf             47-88638999446246789878937898-----6899999850120313999999999999870
Q batch____       338 IN-PPQSAILGMHAIKDRPMAVNGQVEIL-----PMMYLALSYDHRLIDGRESVGFLVTIKELLE  396 (405)
Q Consensus       338 i~-ppq~ail~vG~~~~~p~~~~g~i~~~-----~~~~ltls~DHRvidGa~aa~Fl~~l~~~le  396 (405)
                      -. ..+...+.+.......-.....+.+.     ..+.|++.||-...|.+.+.+||+.+.++|+
T Consensus       437 ~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~~~~~g~L~L~~~Yn~~~~~~~~v~~~l~~~~~~L~  501 (505)
T c3fotA_         437 KQTATGENVLSVESIDFVVNQSLPYLAIRLDSWRDASTLNIIYNDANYTEAEVQKYLQSIVEFML  501 (505)
T ss_dssp             EETTTTEEEEEEEEEEEEECCCSSSCEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf             32334677258987302444445621899997599699999980241999999999999999999