39 c3dm5A_ Probab=99.41   E-value=1.6e-10  Score=76.73  Aligned_columns=186  Identities=15%

Q ss_pred             CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             41899981887698899999999999988995899806013886322356531578999872788841110000124457
Q batch____         2 SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPT   81 (225)
Q Consensus         2 ~k~i~i~g~~gGvGKTtia~~La~~La~~G~~Vl~iD~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (225)
                      ...|+++|.. |+||||+++.||.++.++|++|+++.+|.         ....-...+..................... 
T Consensus       100 p~vI~~vG~~-G~GKTTT~aKLA~~~~~~g~kv~li~aDt---------~R~aA~eQL~~~a~~~~vp~~~~~~~~d~~-  168 (416)
T c3dm5A_         100 PTILLMVGIQ-GSGKTTTVAKLARYFQKRGYKVGVVCSDT---------WRPGAYHQLRQLLDRYHIEVFGNPQEKDAI-  168 (416)
T ss_dssp             SEEEEEECCT-TSSHHHHHHHHHHHHHTTTCCEEEEECCC---------SSTHHHHHHHHHHGGGTCEEECCTTCCCHH-
T ss_pred             CEEEEEECCC-CCCHHHHHHHHHHHHHHCCCCEEEEECCC---------CCHHHHHHHHHHHHHHCCCEEECCCCCCHH-
T ss_conf             6499997058-87734689999999995699189996188---------670169999999886099158548857889-


Q ss_pred             CCCCHHHHCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
Q ss_conf             8630244438518999999999998-517989998067533455236899887875408883698614125899999745
Q batch____        82 SPHIISAQEGRPIESLVMSAGLRAL-EQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA  160 (225)
Q Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~~~l-~~~~d~viiD~~~~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~  160 (225)
                                     +.+++.+... ...||+|+||+++........--.............++.+-....+-.......
T Consensus       169 ---------------~i~~~ai~~~~~~~~DvIlIDTaGR~~~d~~lm~EL~~i~~~~~p~~vllV~dA~~gq~a~~~a~  233 (416)
T c3dm5A_         169 ---------------KLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQAYNQAL  233 (416)
T ss_dssp             ---------------HHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHHH
T ss_pred             ---------------HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
T ss_conf             ---------------99999999999679989998188887998899999999984148421999822678788999999


Q ss_pred             HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE---------ECCCCCCHHHHHCC
Q ss_conf             5555312431079985036872145899999999709989999---------58876553337506
Q batch____       161 QVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGE---------IPWLAENPENAATG  217 (225)
Q Consensus       161 ~~~~~~~~~~~~~v~n~~~~~~~~~~~~~~~l~~~~~~pvlg~---------IP~~~~~~~~~~~g  217 (225)
                      .....  ..+.++|+.+.+.....-.-+  .+...++.|+..+         -||.++.-.+.-+|
T Consensus       234 ~F~~~--i~i~gvIlTKlD~~argG~aL--s~~~~t~~PI~fig~GE~~dDLe~F~p~r~~~rlLG  295 (416)
T c3dm5A_         234 AFKEA--TPIGSIIVTKLDGSAKGGGAL--SAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLG  295 (416)
T ss_dssp             HHHHS--CTTEEEEEECCSSCSSHHHHH--HHHHTTCCCEEEEECSSSTTCEEECCHHHHHHHHTT
T ss_pred             HHHHC--CCCCEEEEECCCCCCCHHHHH--HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCC
T ss_conf             99730--899769997245677267999--999984798899965998113002688999998719