42 c1vmaA_ Probab=99.34   E-value=9.8e-11  Score=77.82  Aligned_columns=172  Identities=16%

Q ss_pred             CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             41899981887698899999999999988995899806013886322356531578999872788841110000124457
Q batch____         2 SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPT   81 (225)
Q Consensus         2 ~k~i~i~g~~gGvGKTtia~~La~~La~~G~~Vl~iD~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (225)
                      .+.|+++|+ .||||||+++.||.+++++|++|+++++|..........-...+.                        .
T Consensus        92 ~~vi~~~Gp-~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~------------------------~  146 (294)
T c1vmaA_          92 PFVIMVVGV-NGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGER------------------------V  146 (294)
T ss_dssp             CEEEEEECC-TTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHH------------------------H
T ss_pred             CEEEEEEEC-CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH------------------------H
T ss_conf             669999806-887602489999999996799489997587686479999999976------------------------1


Q ss_pred             CCCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC-------CCCEEEEECCHHHHH
Q ss_conf             8630244438518999999999998517989998067533455236899887875408-------883698614125899
Q batch____        82 SPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQ-------LPVILVVGVKLGCIN  154 (225)
Q Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~d~viiD~~~~~~~~~~~~~~~a~~~~~~~-------~~~~~v~~~~~~~~~  154 (225)
                      ....-..........-...........+||+|+||+++.........-..........       ..+++|.+. ...-.
T Consensus       147 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a-~~~~~  225 (294)
T c1vmaA_         147 GATVISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDA-TTGQN  225 (294)
T ss_dssp             TCEEECCSTTCCHHHHHHHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEG-GGHHH
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC-CCCHH
T ss_conf             98289748836989999999999997799899981888987857999999999999630356688539998114-68789


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             9997455555312431079985036872145899999999709989999
Q batch____       155 HAMLTAQVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGE  203 (225)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~v~n~~~~~~~~~~~~~~~l~~~~~~pvlg~  203 (225)
                      +........+.  ..+.++|+.+.+.....-.-+  .+....+.|+..+
T Consensus       226 ~~~~~~~~~~~--~~~~~iIlTKlDe~~~~G~~l--~~~~~~~~Pi~~i  270 (294)
T c1vmaA_         226 GLVQAKIFKEA--VNVTGIILTKLDGTAKGGITL--AIARELGIPIKFI  270 (294)
T ss_dssp             HHHHHHHHHHH--SCCCEEEEECGGGCSCTTHHH--HHHHHHCCCEEEE
T ss_pred             HHHHHHHHHHC--CCCCEEEEECCCCCCCHHHHH--HHHHHHCCCEEEE
T ss_conf             99999999630--899769997444788557999--9999857988999