204 c1nijA_ Probab=96.30   E-value=0.039  Score=30.58  Aligned_columns=177  Identities=16%

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             18999818876988999999999999889958998060138863223565315789998727888411100001244578
Q batch____         3 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTS   82 (225)
Q Consensus         3 k~i~i~g~~gGvGKTtia~~La~~La~~G~~Vl~iD~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (225)
                      +...|+| =-|+||||+--+|.+.  .+|.|+.+|-.|        ++-..-+...+.............+..+......
T Consensus         4 pv~iitG-fLGaGKTTll~~ll~~--~~~~~~avi~Ne--------fg~~~iD~~ll~~~~~~v~~l~~GCiCC~~~~~~   72 (317)
T c1nijA_           4 AVTLLTG-FLGAGKTTLLRHILNE--QHGYKIAVIENE--------FGEVSVDDQLIGDRATQIKTLTNGCICCSRSNEL   72 (317)
T ss_dssp             EEEEEEE-SSSSSCHHHHHHHHHS--CCCCCEEEECSS--------CCSCCEEEEEECTTSCEEEEETTSCEEECTTSCH
T ss_pred             CEEEECC-CCCCCHHHHHHHHHHC--CCCCEEEEEEEC--------CCCCCHHHHHHHHCCCEEEEECCCCEECCCHHHH
T ss_conf             1899808-9888988999999842--699738999716--------6444205889840797299977995421324778


Q ss_pred             CCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHH-HHHHHCCCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             63024443851899999999999851798999806753345523689988-78754088836986141258999997455
Q batch____        83 PHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFA-DWVTQEQLPVILVVGVKLGCINHAMLTAQ  161 (225)
Q Consensus        83 ~~~~~~~~~~~~~~~~l~~~~~~l~~~~d~viiD~~~~~~~~~~~~~~~a-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~  161 (225)
                      ....          ..+.+....-...+|+++|++.|.-........... ..........-.++-.+............
T Consensus        73 ~~~l----------~~l~~~~~~~~~~~d~i~IE~sG~a~p~~i~~~l~~~~~l~~~~~l~~vi~vvD~~~~~~~~~~~~  142 (317)
T c1nijA_          73 EDAL----------LDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFT  142 (317)
T ss_dssp             HHHH----------HHHHHHHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETTTHHHHHHHCH
T ss_pred             HHHH----------HHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHHHHHHHH
T ss_conf             9999----------999984125546866899808875798999988630820113089801789974026777663225


Q ss_pred             HHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC-CEE
Q ss_conf             5553124310799850368721458999999997099-899
Q batch____       162 VIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPA-PLL  201 (225)
Q Consensus       162 ~~~~~~~~~~~~v~n~~~~~~~~~~~~~~~l~~~~~~-pvl  201 (225)
                      .+..+-..--.+++|+.+ .........+.+++..+. +++
T Consensus       143 ~~~~Qi~~Ad~ivlnk~D-~~~~~~~i~~~i~~lnP~a~i~  182 (317)
T c1nijA_         143 IAQSQVGYADRILLTKTD-VAGEAEKLHERLARINARAPVY  182 (317)
T ss_dssp             HHHHHHHTCSEEEEECTT-TCSCTHHHHHHHHHHCSSSCEE
T ss_pred             HHHHHHHHCCEEEEECCC-CCCHHHHHHHHHHHHCCCCEEE
T ss_conf             564453107789960556-6898999999997408997799