278 c3jr1A_ Probab=98.29   E-value=5.1e-05  Score=46.40  Aligned_columns=204  Identities=15%

Q ss_pred             CEEEECCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC-CCCEEEEEEECCCCCCC
Q ss_conf             20121057516899964938999998535503433433115038999999999999731699-97122233404457755
Q batch____        27 EVFRELETRRTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRLSDVG-VDTMKGIGFGEKGLNPL  105 (265)
Q Consensus        27 e~~~~~~~r~~~r~~~~g~~~~~K~~~~~~~~~~~k~~~~~~~~~~~~~rE~~~l~~l~~~~-i~~~~~v~~~~~~~~~~  105 (265)
                      +-+.+.....++++...++.|++|..              .......+.+|...+..|...+ +++|.++.+++      
T Consensus        29 ~~l~gG~~n~~y~i~~~~~~~~lK~~--------------~~~~~~~~~~E~~~L~~L~~~~~i~vP~v~~~~~------   88 (296)
T c3jr1A_          29 EKLYSGEXNEIWLINDEVQTVFVKIN--------------ERSYRSXFRAEADQLALLAKTNSINVPLVYGIGN------   88 (296)
T ss_dssp             EEECCSSSSEEEEEESSSCEEEEEEE--------------EGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE------
T ss_pred             EEECCCCCCEEEEEEECCCCEEEEEC--------------CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC------
T ss_conf             76078874038999968963899847--------------8762668999999999999738976870588616------


Q ss_pred             CCCCEEEEEEECCCCC--------HHHHHHHHCCCCCCH-----------------------------------------
Q ss_conf             5651155675058804--------899986303689898-----------------------------------------
Q batch____       106 TRASFIITEDLTPTIS--------LEDYCADWAVNPPDI-----------------------------------------  136 (265)
Q Consensus       106 ~~~~~li~~~l~~~~~--------L~~~~~~~~~~~l~~-----------------------------------------  136 (265)
                      .....++++++.++.+        +...++.......+.                                         
T Consensus        89 ~~g~~~lv~e~i~~~~~~~~~~~~lg~~lA~lh~~~~~~~~g~~~~~~~g~~~~~n~~~~~w~~f~~~~rl~~~~~~~~~  168 (296)
T c3jr1A_          89 SQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKE  168 (296)
T ss_dssp             CSSEEEEEEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHH
T ss_pred             CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             69828999971556667934799987889998702330015766567656443365754565789998568899987874


Q ss_pred             -----HHHHHHHHHHHHHHHHHH-HCCCCCCCCCHHHEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCCCHH
Q ss_conf             -----999999999999999999-76915678997887763788766444531453164201257889867302244464
Q batch____       137 -----RVKRMLIARVATMVRKMH-TAGINHRDCYICHFLLHLPFTGREDELKISVIDLHRAQIRAKVPRRWRDKDLIGLY  210 (265)
Q Consensus       137 -----~~~~~l~~~~~~~l~~lH-~~gi~HrDl~~~Nil~~~~~~~~~~d~~~~~id~~~~~~~~~~~~~~~~~~l~~l~  210 (265)
                           .....++..+...+...- ...++|+|+.++|||++.+        ++++||.+ +........=++....+...
T Consensus       169 ~~~~~~~~~~~~~~l~~~l~~~~~~p~LiHGDl~~gNvl~~~~--------~~~iiDp~-~~~Gd~e~Dla~~~lfg~f~  239 (296)
T c3jr1A_         169 KGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDD--------KIFVCNPA-CYWGDRECDIAFSSLFEPFP  239 (296)
T ss_dssp             HTCCCSCHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETT--------EEEECSCC-CEEECTHHHHHHHTTSSCCC
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEECC--------EEEEECCH-HHCCCHHHHHHHHHHHCCCC
T ss_conf             4799268999999999744215788589834463551699889--------69998141-00681899989987527863


Q ss_pred             HH-------CCCCCCCHHHHHHHHHHHCCCCHHHHH-HCCHHHHHHHHHHHHHHHHH
Q ss_conf             50-------003578988999999986366647865-14838999988544789888
Q batch____       211 FS-------SMNIGLTQRDIWRFMKVYFGMPLRKIL-SLEQNLLNMASVKAERIKER  259 (265)
Q Consensus       211 ~~-------~~~~~~~~~d~~~f~~~Y~~~~~~~~~-~~~~~l~~~v~~~~~~~~~r  259 (265)
                      -.       .....-+..++..+.+.|.-......+ ..+.....++.+...++++|
T Consensus       240 ~~f~~~Y~~~~pl~~~~~~R~~ly~ly~~l~h~~~f~~~g~~y~~~~~~~l~~ll~~  296 (296)
T c3jr1A_         240 TNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNKKQSYVSLTQKLINQILHK  296 (296)
T ss_dssp             HHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf             899998874079883779889999898999998863145213899999999998609