254 c3hamA_ Probab=98.71   E-value=4.8e-06  Score=52.15  Aligned_columns=193  Identities=18%

Q ss_pred             CCCCCCCHHHHHCCCCCHHHHHHCCCCEEEECCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             91102423676437882799974086201210575168999649389999985355034334331150389999999999
Q batch____         1 MVELKEPLATLWRGKDAFAEVKKLNGEVFRELETRRTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHA   80 (265)
Q Consensus         1 ~~~l~~~~~~~w~~~D~fe~v~~l~ge~~~~~~~r~~~r~~~~g~~~~~K~~~~~~~~~~~k~~~~~~~~~~~~~rE~~~   80 (265)
                      |+.|+..+..        .....+.=..++......+-..-..+..+.+|.++.             ........+|+.+
T Consensus         1 ~~~~~~ei~e--------~~~~~~~i~~v~~i~~G~~n~v~~i~~~~vlR~~~~-------------~~~~~~~~~E~~~   59 (299)
T c3hamA_           1 MVNLDAEIYE--------HLNKQIKINELRYLSSGDDSDTFLCNEQYVVKVPKR-------------DSVRISQKREFEL   59 (299)
T ss_dssp             CCCCCHHHHH--------HHHHHSCCSCEEEEEECSSEEEEEETTTEEEEEESS-------------SHHHHHHHHHHHH
T ss_pred             CCCHHHHHHH--------HHCCCCCEEEEEECCCCCEEEEEEECCEEEEEECCC-------------CHHHHHHHHHHHH
T ss_conf             9572689999--------857897311689838986556999999799997797-------------1048889999999


Q ss_pred             HHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC----
Q ss_conf             9973169997122233404457755565115567505880489998630368989899999999999999999976----
Q batch____        81 IHRLSDVGVDTMKGIGFGEKGLNPLTRASFIITEDLTPTISLEDYCADWAVNPPDIRVKRMLIARVATMVRKMHTA----  156 (265)
Q Consensus        81 l~~l~~~~i~~~~~v~~~~~~~~~~~~~~~li~~~l~~~~~L~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~lH~~----  156 (265)
                      +..|.+.+++.+.|....       ....+++++++.+...-...+..     ++..+...++.+++..++.+|..    
T Consensus        60 l~~L~~~~~~~~~p~~~~-------~~~~~~~~~~i~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~~~~~  127 (299)
T c3hamA_          60 YRFLENCKLSYQIPAVVY-------QSDRFNIMKYIKGERITYEQYHK-----LSEKEKDALAYDEATFLKELHSIEIDC  127 (299)
T ss_dssp             HHHHTTSCCSSBCCCEEE-------CCSSCEEEECCCCBCCCHHHHTT-----SCHHHHHHHHHHHHHHHHHHHHSCCCT
T ss_pred             HHHHHHCCCCCCEEEEEE-------CCCCCEEEEEEEECCCCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             999983699802058985-------28982123444302456556568-----898999999999999999762002354


Q ss_pred             -----------------------------------------------------------CCCCCCCCHHHEEECCCCCCC
Q ss_conf             -----------------------------------------------------------915678997887763788766
Q batch____       157 -----------------------------------------------------------GINHRDCYICHFLLHLPFTGR  177 (265)
Q Consensus       157 -----------------------------------------------------------gi~HrDl~~~Nil~~~~~~~~  177 (265)
                                                                                 .++|+|+.|+|||++.+..  
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgDl~~~Nil~~~~~i--  205 (299)
T c3hamA_         128 SVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILNNAVLFKYTPCLVHNDFSANNMIFRNNRL--  205 (299)
T ss_dssp             TSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGGCCCCEEECSCCSGGGEEEETTEE--
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHEEEECCEE--
T ss_conf             444568755441144899999989754200103544499999999999611002679838995678901454448839--


Q ss_pred             CCCCCEEEECCCCCCCCCCCCHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             444531453164201257889867302244464500035789889999999863666478651
Q batch____       178 EDELKISVIDLHRAQIRAKVPRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFGMPLRKILS  240 (265)
Q Consensus       178 ~~d~~~~~id~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~d~~~f~~~Y~~~~~~~~~~  240 (265)
                           .++||++.+..+.+.      .|++.+....... .+....-.|+..|..........
T Consensus       206 -----~giIDfe~a~~gdp~------~Dla~~~~~~~~~-~~~~~~~~~~~~y~~~~~~~~~~  256 (299)
T c3hamA_         206 -----FGVIDFGDFNVGDPD------NDFLCLLDCSTDD-FGKEFGRKVLKYYQHKAPEVAER  256 (299)
T ss_dssp             -----EEECCCTTCEEECGG------GGTTTTTSSSSSS-SCHHHHHHHHHTTTCSCHHHHHH
T ss_pred             -----EEEEECCCCCCCCHH------HHHHHHHHHCCHH-HHHHHHHHHHHHHCCCCCHHHHH
T ss_conf             -----999706335678889------9999999505433-20699999998501158956999