200 c2vagA_ Probab=99.25   E-value=1.7e-10  Score=77.07  Aligned_columns=188  Identities=12%

Q ss_pred             EEECCCEEEEEEEECC-----CCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEE
Q ss_conf             9964938999998535-----50343343311503899999999999973169997122233404457755565115567
Q batch____        40 FELSGKSYFLKWHKGT-----TLKEIIKNLLSLRMPVLGADREWHAIHRLSDVGVDTMKGIGFGEKGLNPLTRASFIITE  114 (265)
Q Consensus        40 ~~~~g~~~~~K~~~~~-----~~~~~~k~~~~~~~~~~~~~rE~~~l~~l~~~~i~~~~~v~~~~~~~~~~~~~~~li~~  114 (265)
                      .+..|+|.|+++|++.     +...++|.+.........+.+|+.++..+.|++++............   .....+...
T Consensus        18 ~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~---~~~~~~~~~   94 (330)
T c2vagA_          18 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF---EHHGHICIV   94 (330)
T ss_dssp             EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE---EETTEEEEE
T ss_pred             EEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC---CCCCEECCC
T ss_conf             99987628848999999767983999999839905689999999999984312223312220000123---332000012


Q ss_pred             EECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCCCCC---------EEE
Q ss_conf             50588048999863036898989999999999999999997691567899788776378876644453---------145
Q batch____       115 DLTPTISLEDYCADWAVNPPDIRVKRMLIARVATMVRKMHTAGINHRDCYICHFLLHLPFTGREDELK---------ISV  185 (265)
Q Consensus       115 ~l~~~~~L~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~lH~~gi~HrDl~~~Nil~~~~~~~~~~d~~---------~~~  185 (265)
                      ....................+......+..++..++.++|..+++|+|++|.||+++.++..+..+++         +..
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~~~~~~~~  174 (330)
T c2vagA_          95 FELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTLINPDIKV  174 (330)
T ss_dssp             EECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEESCCCEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCEE
T ss_conf             21123675211122211101365655555445555543110122223455415898578862000345433444432100


Q ss_pred             ECCCCCCCCCCCCHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHC
Q ss_conf             3164201257889867302244464500035789889999999863
Q batch____       186 IDLHRAQIRAKVPRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYF  231 (265)
Q Consensus       186 id~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~d~~~f~~~Y~  231 (265)
                      +|++..... .............+............|.|.+....+
T Consensus       175 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  219 (330)
T c2vagA_         175 VDFGSATYD-DEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILI  219 (330)
T ss_dssp             CCCSSCEET-TSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHH
T ss_pred             ECCCCCCCC-CCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEE
T ss_conf             014663326-754200121023210000011112354210225873