14/01/2012 03:55:16 : INFO  : Run start: Sat Jan 14 03:55:15 GMT 2012
14/01/2012 03:55:21 : INFO  : Initialised job
14/01/2012 03:55:23 : INFO  : Renaming log file 'phyre2_20120114_035515.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/5a1942c8eb97d30e/phyre_20120114_035515.log'
14/01/2012 03:55:24 : INFO  : Initialised job:
Sequence
>batch____
MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAI
VEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIE
IEAIAVRR

14/01/2012 03:55:25 : INFO  : Checked sequence
14/01/2012 03:55:28 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 03:55:29 : INFO  : PSI-BLAST 3 iterations
14/01/2012 03:56:41 : INFO  : PSI-BLAST 5 iterations
14/01/2012 03:58:11 : INFO  : Finished PSI-BLAST
14/01/2012 03:58:12 : INFO  : Running Buildali to generate a3m file
14/01/2012 04:03:39 : INFO  : Converting to HMM
14/01/2012 04:03:40 : INFO  : Calibrating HMM
14/01/2012 04:03:48 : INFO  : Searching HMM database
14/01/2012 04:07:05 : INFO  : Finished buildali
14/01/2012 04:07:06 : INFO  : Predicting secondary structure
14/01/2012 04:07:09 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 04:07:10 : INFO  : Predicting Disordered regions
14/01/2012 04:07:11 : INFO  : Predicted Disorder (Disopred)
14/01/2012 04:07:12 : INFO  : Running memsat_svm check
14/01/2012 04:08:30 : INFO  : Globular protein
14/01/2012 04:08:31 : INFO  : Predicted Transmembrane (memsat_svm) ID '5a1942c8eb97d30e'
14/01/2012 04:08:32 : INFO  : Initialising fold library search
14/01/2012 04:08:34 : INFO  : Initialised search input
14/01/2012 04:08:36 : INFO  : Building Ensemble models
14/01/2012 04:08:38 : INFO  : Building hh.d1qu9a_.model.1.pdb
14/01/2012 04:08:45 : INFO  : Building d1j7ha_.1.pdb
14/01/2012 04:08:52 : INFO  : Building d1qu9a_.2.pdb
14/01/2012 04:08:59 : INFO  : Building d1onia_.3.pdb
14/01/2012 04:09:05 : INFO  : Building d1nq3a_.4.pdb
14/01/2012 04:09:11 : INFO  : Building c3quwA_.5.pdb
14/01/2012 04:09:17 : INFO  : Building d2b33a1.6.pdb
14/01/2012 04:09:23 : INFO  : Building d1qaha_.7.pdb
14/01/2012 04:09:29 : INFO  : Building c3k0tA_.8.pdb
14/01/2012 04:09:36 : INFO  : Building d1jd1a_.9.pdb
14/01/2012 04:09:43 : INFO  : Building d2cvla1.10.pdb
14/01/2012 04:09:49 : INFO  : Building d1qd9a_.11.pdb
14/01/2012 04:09:54 : INFO  : Building c3r0pB_.12.pdb
14/01/2012 04:10:00 : INFO  : Building c1xrgB_.13.pdb
14/01/2012 04:10:07 : INFO  : Building c2dyyG_.14.pdb
14/01/2012 04:10:14 : INFO  : Building d1x25a1.15.pdb
14/01/2012 04:10:21 : INFO  : Building c3l7qD_.16.pdb
14/01/2012 04:10:28 : INFO  : Building d1xrga_.17.pdb
14/01/2012 04:10:36 : INFO  : Building c3lmeE_.18.pdb
14/01/2012 04:10:43 : INFO  : Building c3m4sC_.19.pdb
14/01/2012 04:10:51 : INFO  : Building c3v4dC_.20.pdb
14/01/2012 04:11:13 : INFO  : Finished HH model building
14/01/2012 04:11:15 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 04:11:59 : INFO  : html domain output complete ID '5a1942c8eb97d30e'
14/01/2012 04:25:58 : INFO  : Run end  : Sat Jan 14 04:25:57 GMT 2012
