Phyre 2 alignment of P0AF93 with c3kdpD_

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Job Description | P0AF93
Confidence | 3.50% | Date | Thu Jan 5 11:25:37 GMT 2012
Rank | 64 | Aligned Residues | 31
% Identity | 23% | Template | c3kdpD_
PDB info | PDB header:hydrolase | Chain: D: PDB Molecule:sodium/potassium-transporting atpase subunit beta-1; | PDBTitle: crystal structure of the sodium-potassium pump
Resolution | 3.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | H | N | A | T | F | P | A | R | S | C | V | E | V | A | R | L | P | K | D | V | K | I | E | I | E | A | I | A | V | R | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | P | K | Y | L | Q | P | L | M | A | V | Q | F | T | N | L | T | M | D | T | E | I | R | I | E | C | K | A | Y | G | E
Template Known Secondary structure |  |  | T | T |  |  |  |  |  |  |  | B |  | B |  |  | S |  |  | S |  |  |  |  | B |  |  |  |  |  | S | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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