BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (189 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS... 355 5e-97 UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS... 204 2e-51 UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O6431... 169 6e-41 UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=1... 101 1e-20 UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID... 100 2e-20 UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH 96 9e-19 UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enter... 89 8e-17 UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. E... 84 2e-15 UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root Rep... 66 6e-10 UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongk... 61 2e-08 UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 ... 61 2e-08 UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella ... 57 3e-07 UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of term... 56 7e-07 UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of term... 54 3e-06 UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polarom... 49 8e-05 UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae... 49 1e-04 UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepI... 47 4e-04 UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclass... 44 0.003 UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=unc... 42 0.012 UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitroba... 40 0.028 UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protei... 40 0.045 >UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS_LAMBD Length = 181 Score = 355 bits (911), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 173/176 (98%), Positives = 175/176 (99%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVI+WYAERDAEIENE Sbjct: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLRREVEELRQASE DLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR Sbjct: 61 KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY 176 IAGEIASILDG+PLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY Sbjct: 121 IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY 176 >UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS_BPP21 Length = 182 Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 95/180 (52%), Positives = 136/180 (75%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M+VNKK+LA+IF RTI+ WQ QG+P G KG E ++D+A I+WYA+R+ +IENE Sbjct: 1 MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRETDIENE 60 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLR+E+++LR A+E+DLQPGTI+YER+RLT+AQADAQELKNAR+ V+ET TF+L R Sbjct: 61 KLRKELDDLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRAD 180 +A EI+ IL +PL++QR++P++ H+D +K +I KA N AA E + G + ++ RA+ Sbjct: 121 VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE 180 >UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O64316_BPN15 Length = 168 Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 94/174 (54%), Positives = 117/174 (67%), Gaps = 16/174 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +NK +A G S++ W Q PV + +G EV +D +V+ D +EN+ Sbjct: 5 LNKSDMASSLGISVQAFDKWGVQ--PVEK---RGREVFFDVRSVV------DNRLENQS- 52 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +L+ + D I+YER RLTRA ADA EL N + EVVETAFCTFVLSRIA Sbjct: 53 ----RKLQPSPGDDDDGVNIDYERWRLTRANADAAELANEKKRREVVETAFCTFVLSRIA 108 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY 176 EI+SILDGIPLS+QRRFPELENRH++FLK D+IKAMNKAAALDE IPGLL++Y Sbjct: 109 AEISSILDGIPLSMQRRFPELENRHIEFLKGDVIKAMNKAAALDERIPGLLNDY 162 >UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=16 Tax=Enterobacteriaceae RepID=A1Z2S0_ECOLX Length = 180 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 101/176 (57%), Gaps = 21/176 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGM-PVLRGGGKGNEVLYDSAAVIRWYAERD-AEIENE 60 +NKK +A S W G+ PV R KG E YD A+VI +++ N+ Sbjct: 6 MNKKNMAKSCRVSATAFDKW---GVTPVER---KGREAFYDVASVIENRVNNAISQLIND 59 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 K + +EL + R RL AQA+AQELKN RD +V++T FC + LS+ Sbjct: 60 KGEIDDDELLRV-------------RIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSK 106 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY 176 +A +I+SI+D +PL++QR FP++ +D LKR+++KA N +A + + +P +L++Y Sbjct: 107 LASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADY 162 >UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID=A6WJC0_SHEB8 Length = 177 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/98 (55%), Positives = 69/98 (70%), Gaps = 1/98 (1%) Query: 84 YERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPEL 143 YER RL RAQA QE+KN +D EVVE F TFVL+RIA +IA +LD I + V+R+FP++ Sbjct: 80 YERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIAAQIAPVLDQIHIRVKRKFPDI 139 Query: 144 ENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY-NRAD 180 R +D +K ++IK+ N AA L E I GLL EY RAD Sbjct: 140 PERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYIGRAD 177 >UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH Length = 159 Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 16/172 (9%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVE 67 +A G S++ W G+P + +G EVLYD V+ +R+ N++ + Sbjct: 1 MASSIGISVQAFDKW---GVPPVER--RGREVLYDVKTVLE--IDRERRQHNQRTPDDGG 53 Query: 68 ELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 EL + + R LT QA AQ+LKN +++++ FC F LS++A ++S Sbjct: 54 ELEE---------RLLRARAELTEEQAVAQKLKNQVTEGKLIDSDFCVFALSKLAMALSS 104 Query: 128 ILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRA 179 LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EY RA Sbjct: 105 TLDSIPLSMQRQFPDLTPRHIDHLKTLIAKGANQCARAGDKLPDLLDEYIRA 156 >UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enterobacteriaceae RepID=B7ULU1_ECO27 Length = 169 Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 60/94 (63%) Query: 86 RHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELEN 145 R LT QA Q+LKN ++++T FC F LS++A ++S LD IPLS+QR+FP+L Sbjct: 73 RWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTP 132 Query: 146 RHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRA 179 RH+D LK I K N+ A + +P LL EY RA Sbjct: 133 RHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRA 166 >UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIS8_9ALTE Length = 165 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 24/174 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +N++Q+A ++ W+ + PV R G +V YD+ +V+ EN Sbjct: 10 LNQQQMAKSLNLTVSAFARWEVE--PVAR---IGKQVFYDAYSVL----------ENR-- 52 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 L +A G IE ER RLT AQA+ QELKN ++ T LS +A Sbjct: 53 ------LSKAGPAG-SNGDIEAERLRLTSAQAEGQELKNELSKGKIAPIEIITLSLSTVA 105 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY 176 G A ILD +PL+++R++PEL + ++ +KR +KA N+ + LD ++ L +Y Sbjct: 106 GAAAGILDSLPLNIKRQYPELSAQMIEAIKRQCVKAQNEISRLDSVVVDKLEDY 159 >UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root RepID=B3G2H2_PSEAE Length = 169 Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 25/181 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +NK ++A G S + W Q P+ R G E Y A V+ EN Sbjct: 1 MNKSEMASSLGISPQAFDKWGVQ--PIER---IGREAFYTVADVV----------EN--- 42 Query: 63 RREVEELRQASETDLQPGTIEY-------ERHRLTRAQADAQELKNARDSAEVVETAFCT 115 R + +Q E +L G Y R LTRAQ AQE KN + +V F T Sbjct: 43 RIQHAARKQQPEGELPEGVDPYVEAKLMQARLELTRAQTYAQEQKNQVNDKLLVPVPFAT 102 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSE 175 + L++IA +I S L+ + +V +R PE++ ++ +R+I A N +A + +PG L E Sbjct: 103 YALAKIAAKIGSKLETVGKTVSQRHPEMDPLILEAFEREIALARNLSADFGDDLPGYLDE 162 Query: 176 Y 176 Y Sbjct: 163 Y 163 >UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D857_LARHH Length = 171 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 37/53 (69%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDA 55 VNK++L+ I G S RT+ WQ +GMPV+ G+G+ YD+AAVI+WY R A Sbjct: 5 VNKRELSLILGISERTLTEWQREGMPVVTHTGRGSANQYDTAAVIKWYGARVA 57 >UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 homolog n=15 Tax=Enterobacteriaceae RepID=B2TZ59_SHIB3 Length = 139 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/56 (48%), Positives = 38/56 (67%) Query: 86 RHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFP 141 R LT QA Q+LKN ++++T FC F LS++A ++S LD IPLS+QR+FP Sbjct: 73 RWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFP 128 >UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella fastidiosa RepID=Q87CG5_XYLFT Length = 191 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 18/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 +VN+ L++IFG ++ T+ W G PV++ GG+G E +D+A V RW ++ AE Sbjct: 24 QVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGG 83 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++E E++R ++ A+A +EL A +V L+R+ Sbjct: 84 AVADIE---------------EWKRRKIA-AEAQREELHLADAKKQVAPLEQVEKTLARV 127 Query: 122 AGEIASILDGIP-LSVQRRFPEL-ENRHVDFLKRDIIKAMNKAAALD 166 E+ + L IP +V E E R+ L ++I + + A+LD Sbjct: 128 FAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD 174 >UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M4E7_NEISI Length = 163 Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 6/74 (8%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLR---GGGKGNEVLYDSAAVIRWYAERDAE- 56 M+VNK+QLADI G + + + NWQ++G+PV G NE YD+ AVIRW +R+ E Sbjct: 1 MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANE--YDTVAVIRWMFQRELER 58 Query: 57 IENEKLRREVEELR 70 + EK R ++ ++ Sbjct: 59 LNKEKPRDRLDRVK 72 >UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SI57_HAHCH Length = 174 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 23/130 (17%) Query: 1 MEVNKKQLADIFGASIRTIQNWQ-EQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M+VNKKQLADIFG S RT +Q + P++ G+G YD+ AV + +R Sbjct: 1 MKVNKKQLADIFGISERTFTQYQKDPDFPIVLDAGRGASNQYDTVAVFNFLKDR------ 54 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 L E R RL R +A+ + L RD E+V + +L Sbjct: 55 ----------------ALSGAKFESARDRLDRIRAERETLALGRDLGELVPASELEALLE 98 Query: 120 RIAGEIASIL 129 ++ I + L Sbjct: 99 QVVTAIKTTL 108 >UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPI8_POLNA Length = 168 Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 22/109 (20%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 ++Q+A +FG + +TI WQ G P+ GG G YDS A I W + Sbjct: 5 GQEQIAALFGVAPKTITEWQVLGFPIAFQGGPGVPSEYDSPACITWM-----------VG 53 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETA 112 REV ++R E + RL+R Q D E RD ++ + Sbjct: 54 REVSKIRS-----------ETPKDRLSRLQGDKIERDMMRDDGLLIPAS 91 >UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae RepID=Q1GH30_SILST Length = 184 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 EVN+ +LA+I G S+ T+ W +G PV++ GG+G +++A V W RD +I Sbjct: 12 EVNRAELANINGVSLPTVDEWVRRGCPVVQRGGRGRAWKFNTAEVRSW---RDDDIRA-- 66 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 QAS T + T + R A+ + EL AR E+V L++ Sbjct: 67 ---------QASHTGM--ATKDELTLRKLAAETEQAELDLARAKEELVPVEQFDRALAKA 115 Query: 122 AGEI-ASILDGIPLSVQRRF 140 GE+ A I + +P RR Sbjct: 116 FGEVRAGIRNVLPSRAARRL 135 >UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepID=A6X1C0_OCHA4 Length = 302 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 18/166 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 E+ LA+I G S R I ++ E+G+ V G + +D ++ Y E Sbjct: 128 EITAADLAEILGVSKRAISDYVERGIIVKTGRNR-----FDLRKSVQLYCEH-------- 174 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 R + R D T+ ER RL R QAD L+NA E+V A I Sbjct: 175 -LRGIAAGRGGDNVD----TLATERARLAREQADQAALRNAAMRKELVPIAEVRNEWVSI 229 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167 A + +++ +P ++ P L VD + +I A+ + D+ Sbjct: 230 ARRVRNVMMAVPSRCRQMLPHLTTFDVDLIDEEIRTALTELGEKDD 275 >UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclassified Myoviridae RepID=B0ZSE9_9CAUD Length = 191 Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 28/52 (53%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERD 54 V+KK A + G S R I W ++GMP GGGKG + D+ I W R+ Sbjct: 5 VSKKMFAKMVGKSERWIGKWVDEGMPTAGGGGKGRVLEIDTEDAIDWLIRRE 56 >UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2V9_9BACT Length = 267 Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 19/156 (12%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGG-GKGNEVLYDSAAVIRWYAERDAEIENEKLRR 64 +++ ++FG S RTI+ W EQG +++G N+ YD A+ ++ RD + +R+ Sbjct: 31 REIKELFGLSERTIRRWTEQG--IIQGTPALNNDFTYDFQALTQFRRVRDLRAQGHSIRQ 88 Query: 65 EVEEL-------RQASETDLQPGTIEYERHRLTRAQADAQELKN---ARDSAEVVETAFC 114 EL R+ E + +E + Q D + +++ A D+ + V A+C Sbjct: 89 IEAELQGQLNLFRRVEENRIARLRTPFEEALVLDDQNDPRAIESYLEAIDNGDNVAEAYC 148 Query: 115 TF-VLSRIAGEIASILDGIPLSVQRRFPELENRHVD 149 ++++ G + LD L+++ E RHV+ Sbjct: 149 NLGIINKDLGNVGVALDNFTLALKH-----EPRHVE 179 >UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitrobacter hamburgensis X14 RepID=Q1QKR3_NITHX Length = 182 Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 17/162 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 EV+ K+LA++FG S R+++ ++G ++ +G +L +S ++ Y Sbjct: 10 EVSAKELAELFGISDRSVRELHDRG--TVKKSARGRYLLTES---VQLYTAH-------- 56 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 R V R L + ER RL + QADA LKNA E+V + + Sbjct: 57 -LRGVAAGRGGEGGVLD---LTVERARLAKEQADAVSLKNAVMRRELVPVSDVEREWMSV 112 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 ++ S + +P V++ P L D + R+I A+ A Sbjct: 113 GRQVRSGMLAVPSRVRQSLPHLTAFDADLIDREIRDALTGLA 154 >UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSD8_OPITP Length = 233 Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 4/54 (7%) Query: 1 MEVNKKQLADIFGASIRTIQNW-QEQGMPVLRGGGKGNEVLYDSAAVIRWYAER 53 M +N QLA+ FG + +++W +++G+P +R G+ +++D A V+ W AER Sbjct: 1 MYLNVIQLAESFGVAESVVESWIRDEGLPCVRDSGR---LMFDRAQVVAWAAER 51 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS... 227 1e-58 UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS... 210 3e-53 UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O6431... 173 3e-42 UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH 160 3e-38 UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=1... 157 3e-37 UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root Rep... 144 1e-33 UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enter... 136 4e-31 UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. E... 135 1e-30 UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID... 131 8e-30 UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepI... 125 6e-28 UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella ... 123 2e-27 UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae... 103 5e-21 UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of term... 97 3e-19 UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polarom... 94 2e-18 UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongk... 88 1e-16 UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 ... 85 1e-15 UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of term... 84 3e-15 Sequences not found previously or not previously below threshold: UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitroba... 87 4e-16 UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of termi... 77 4e-13 UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of termi... 69 8e-11 UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitroba... 66 7e-10 UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomi... 65 1e-09 UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio ... 64 3e-09 UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalk... 63 4e-09 UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenz... 61 2e-08 UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodoba... 57 2e-07 UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclass... 56 8e-07 UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodoba... 55 1e-06 UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkhol... 55 2e-06 UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreic... 54 3e-06 UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkhol... 48 1e-04 UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congreg... 48 2e-04 UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD 48 2e-04 UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphapr... 47 3e-04 UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkhol... 47 4e-04 UniRef50_B9D1V0 Putative uncharacterized protein n=1 Tax=Campylo... 47 4e-04 UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethios... 46 4e-04 UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax... 46 5e-04 UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protei... 46 8e-04 UniRef50_UPI0001A443EF hypothetical protein PcarcW_19609 n=1 Tax... 45 0.001 UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastop... 45 0.001 UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escheri... 45 0.001 UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter ... 45 0.001 UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax... 43 0.004 UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobac... 43 0.005 UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfo... 42 0.010 UniRef50_Q73IA8 Putative uncharacterized protein n=7 Tax=root Re... 42 0.011 UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Esc... 41 0.016 UniRef50_A5V8D7 Putative uncharacterized protein n=1 Tax=Sphingo... 40 0.030 UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteur... 40 0.031 UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminoc... 40 0.041 UniRef50_A0L5S8 Transcriptional regulator, Fis family n=1 Tax=Ma... 40 0.043 UniRef50_Q1WDJ1 Putative uncharacterized protein n=1 Tax=Strepto... 40 0.053 UniRef50_UPI00005A316F PREDICTED: similar to CG12600-PA isoform ... 40 0.065 UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=unc... 39 0.079 UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterob... 39 0.098 >UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS_LAMBD Length = 181 Score = 227 bits (578), Expect = 1e-58, Method: Composition-based stats. Identities = 173/177 (97%), Positives = 175/177 (98%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVI+WYAERDAEIENE Sbjct: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLRREVEELRQASE DLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR Sbjct: 61 KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYN 177 IAGEIASILDG+PLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY Sbjct: 121 IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 >UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS_BPP21 Length = 182 Score = 210 bits (533), Expect = 3e-53, Method: Composition-based stats. Identities = 95/180 (52%), Positives = 136/180 (75%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M+VNKK+LA+IF RTI+ WQ QG+P G KG E ++D+A I+WYA+R+ +IENE Sbjct: 1 MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRETDIENE 60 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLR+E+++LR A+E+DLQPGTI+YER+RLT+AQADAQELKNAR+ V+ET TF+L R Sbjct: 61 KLRKELDDLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRAD 180 +A EI+ IL +PL++QR++P++ H+D +K +I KA N AA E + G + ++ RA+ Sbjct: 121 VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE 180 >UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O64316_BPN15 Length = 168 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 92/175 (52%), Positives = 114/175 (65%), Gaps = 16/175 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +NK +A G S++ W Q PV + +G EV +D +V+ E + Sbjct: 5 LNKSDMASSLGISVQAFDKWGVQ--PVEK---RGREVFFDVRSVVDNRLENQSR------ 53 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +L+ + D I+YER RLTRA ADA EL N + EVVETAFCTFVLSRIA Sbjct: 54 -----KLQPSPGDDDDGVNIDYERWRLTRANADAAELANEKKRREVVETAFCTFVLSRIA 108 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYN 177 EI+SILDGIPLS+QRRFPELENRH++FLK D+IKAMNKAAALDE IPGLL++Y Sbjct: 109 AEISSILDGIPLSMQRRFPELENRHIEFLKGDVIKAMNKAAALDERIPGLLNDYI 163 >UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH Length = 159 Score = 160 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 16/172 (9%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVE 67 +A G S++ W G+P + +G EVLYD V+ +R+ N++ + Sbjct: 1 MASSIGISVQAFDKW---GVPPVER--RGREVLYDVKTVLE--IDRERRQHNQRTPDDGG 53 Query: 68 ELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 EL + + R LT QA AQ+LKN +++++ FC F LS++A ++S Sbjct: 54 ELEE---------RLLRARAELTEEQAVAQKLKNQVTEGKLIDSDFCVFALSKLAMALSS 104 Query: 128 ILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRA 179 LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EY RA Sbjct: 105 TLDSIPLSMQRQFPDLTPRHIDHLKTLIAKGANQCARAGDKLPDLLDEYIRA 156 >UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=16 Tax=Enterobacteriaceae RepID=A1Z2S0_ECOLX Length = 180 Score = 157 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 19/177 (10%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERD-AEIENEK 61 +NKK +A S W PV R KG E YD A+VI +++ N+K Sbjct: 6 MNKKNMAKSCRVSATAFDKWGV--TPVER---KGREAFYDVASVIENRVNNAISQLINDK 60 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + +EL + R RL AQA+AQELKN RD +V++T FC + LS++ Sbjct: 61 GEIDDDELLRV-------------RIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSKL 107 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNR 178 A +I+SI+D +PL++QR FP++ +D LKR+++KA N +A + + +P +L++Y + Sbjct: 108 ASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADYLK 164 >UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root RepID=B3G2H2_PSEAE Length = 169 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 25/181 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +NK ++A G S + W Q P+ R G E Y A V+ + A Sbjct: 1 MNKSEMASSLGISPQAFDKWGVQ--PIER---IGREAFYTVADVVENRIQHAAR------ 49 Query: 63 RREVEELRQASETDLQPGTIEY-------ERHRLTRAQADAQELKNARDSAEVVETAFCT 115 +Q E +L G Y R LTRAQ AQE KN + +V F T Sbjct: 50 -------KQQPEGELPEGVDPYVEAKLMQARLELTRAQTYAQEQKNQVNDKLLVPVPFAT 102 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSE 175 + L++IA +I S L+ + +V +R PE++ ++ +R+I A N +A + +PG L E Sbjct: 103 YALAKIAAKIGSKLETVGKTVSQRHPEMDPLILEAFEREIALARNLSADFGDDLPGYLDE 162 Query: 176 Y 176 Y Sbjct: 163 Y 163 >UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enterobacteriaceae RepID=B7ULU1_ECO27 Length = 169 Score = 136 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 14/177 (7%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + ++A + R ++ Q+ G P+ G D A +Y +N+ Sbjct: 3 TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E D + R LT QA Q+LKN ++++T FC F LS++A Sbjct: 58 DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRA 179 ++S LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EY RA Sbjct: 110 MALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRA 166 >UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIS8_9ALTE Length = 165 Score = 135 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 24/174 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +N++Q+A ++ W+ + PV R G +V YD+ +V+ Sbjct: 10 LNQQQMAKSLNLTVSAFARWEVE--PVAR---IGKQVFYDAYSVLEN------------- 51 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 L +A G IE ER RLT AQA+ QELKN ++ T LS +A Sbjct: 52 -----RLSKAGPAG-SNGDIEAERLRLTSAQAEGQELKNELSKGKIAPIEIITLSLSTVA 105 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY 176 G A ILD +PL+++R++PEL + ++ +KR +KA N+ + LD ++ L +Y Sbjct: 106 GAAAGILDSLPLNIKRQYPELSAQMIEAIKRQCVKAQNEISRLDSVVVDKLEDY 159 >UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID=A6WJC0_SHEB8 Length = 177 Score = 131 bits (330), Expect = 8e-30, Method: Composition-based stats. Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 16/179 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 ++K L S + W +PV G LY A V+ + + Sbjct: 14 LSKTDLCKSLEISTQAFDKW---DVPV--HSKLGRVCLYKMADVVGNRLANERK------ 62 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + + E D ++YER RL RAQA QE+KN +D EVVE F TFVL+RIA Sbjct: 63 ----KTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIA 118 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY-NRAD 180 +IA +LD I + V+R+FP++ R +D +K ++IK+ N AA L E I GLL EY RAD Sbjct: 119 AQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYIGRAD 177 >UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepID=A6X1C0_OCHA4 Length = 302 Score = 125 bits (314), Expect = 6e-28, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 18/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 E+ LA+I G S R I ++ E+G+ V G + +D ++ Y E I + Sbjct: 128 EITAADLAEILGVSKRAISDYVERGIIVKTGRNR-----FDLRKSVQLYCEHLRGIAAGR 182 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 V+ T+ ER RL R QAD L+NA E+V A I Sbjct: 183 GGDNVD-------------TLATERARLAREQADQAALRNAAMRKELVPIAEVRNEWVSI 229 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDEL 168 A + +++ +P ++ P L VD + +I A+ + D+ Sbjct: 230 ARRVRNVMMAVPSRCRQMLPHLTTFDVDLIDEEIRTALTELGEKDDD 276 >UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella fastidiosa RepID=Q87CG5_XYLFT Length = 191 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 18/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 +VN+ L++IFG ++ T+ W G PV++ GG+G E +D+A V RW ++ AE Sbjct: 24 QVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGG 83 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++E E++R ++ A+A +EL A +V L+R+ Sbjct: 84 AVADIE---------------EWKRRKIA-AEAQREELHLADAKKQVAPLEQVEKTLARV 127 Query: 122 AGEIASILDGIP-LSVQRRFPEL-ENRHVDFLKRDIIKAMNKAAALD 166 E+ + L IP +V E E R+ L ++I + + A+LD Sbjct: 128 FAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD 174 >UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae RepID=Q1GH30_SILST Length = 184 Score = 103 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 19/168 (11%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 EVN+ +LA+I G S+ T+ W +G PV++ GG+G +++A V W Sbjct: 12 EVNRAELANINGVSLPTVDEWVRRGCPVVQRGGRGRAWKFNTAEVRSW------------ 59 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 R+ + QAS T + T + R A+ + EL AR E+V L++ Sbjct: 60 --RDDDIRAQASHTGM--ATKDELTLRKLAAETEQAELDLARAKEELVPVEQFDRALAKA 115 Query: 122 AGEIA-SILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166 GE+ I + +P RR E + L ++ + + A D Sbjct: 116 FGEVRAGIRNVLPSRAARRLIGESDETQIKAVLLDEVDQVLEALADTD 163 >UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SI57_HAHCH Length = 174 Score = 96.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 33/192 (17%) Query: 1 MEVNKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M+VNKKQLADIFG S RT +Q+ P++ G+G YD+ AV + +R Sbjct: 1 MKVNKKQLADIFGISERTFTQYQKDPDFPIVLDAGRGASNQYDTVAVFNFLKDRA----- 55 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 L E R RL R +A+ + L RD E+V + +L Sbjct: 56 -----------------LSGAKFESARDRLDRIRAERETLALGRDLGELVPASELEALLE 98 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRH-----VDFLKRDIIKAMNKAAALDELIPGLLS 174 ++ I + L ++ EL+ R+ D L +A+ AAL + Sbjct: 99 QVVTAIKTTLLDSNHILKT---ELDARYDIDVEPDILDEHSRQALTHLAALGDQYAE--G 153 Query: 175 EYNRADRQYAGG 186 + RA+ A G Sbjct: 154 DSERAEEVPAAG 165 >UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPI8_POLNA Length = 168 Score = 94.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 63/174 (36%), Gaps = 27/174 (15%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 ++Q+A +FG + +TI WQ G P+ GG G YDS A I W R+ Sbjct: 5 GQEQIAALFGVAPKTITEWQVLGFPIAFQGGPGVPSEYDSPACITWMVGRE--------- 55 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + E + RL+R Q D E RD ++ + + Sbjct: 56 -------------VSKIRSETPKDRLSRLQGDKIERDMMRDDGLLIPASEIEPMWEGAVI 102 Query: 124 EIASILDGIP-----LSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 L G P LS+ P LE + ++K N AA+ + G Sbjct: 103 AAREYLLGEPPRIASLSIGMEKPALEELLRTTFEAYLVKLSNWRAAMQDDDEGK 156 >UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D857_LARHH Length = 171 Score = 88.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 22/131 (16%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 VNK++L+ I G S RT+ WQ +GMPV+ G+G+ YD+AAVI+WY R A Sbjct: 5 VNKRELSLILGISERTLTEWQREGMPVVTHTGRGSANQYDTAAVIKWYGARVA------- 57 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E + RL R + D E++ A++ +V L + Sbjct: 58 ---------------NGASKESAKDRLDRLRGDQVEIEIAKELRRLVAIDEIEPALGQFV 102 Query: 123 GEIASILDGIP 133 + S++ +P Sbjct: 103 ADAVSLMAALP 113 >UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitrobacter hamburgensis X14 RepID=Q1QKR3_NITHX Length = 182 Score = 86.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 17/179 (9%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 EV+ K+LA++FG S R+++ ++G ++ +G Y ++ Y Sbjct: 10 EVSAKELAELFGISDRSVRELHDRG--TVKKSARGR---YLLTESVQLYTAH-------- 56 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 R V R L + ER RL + QADA LKNA E+V + + Sbjct: 57 -LRGVAAGRGGEGGVLD---LTVERARLAKEQADAVSLKNAVMRRELVPVSDVEREWMSV 112 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRAD 180 ++ S + +P V++ P L D + R+I A+ A D + + +D Sbjct: 113 GRQVRSGMLAVPSRVRQSLPHLTAFDADLIDREIRDALTGLADNDSDHEVAVGDVVESD 171 >UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 homolog n=15 Tax=Enterobacteriaceae RepID=B2TZ59_SHIB3 Length = 139 Score = 85.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 14/139 (10%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + ++A + R ++ Q+ G P+ G D A +Y +N+ Sbjct: 3 TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E D + R LT QA Q+LKN ++++T FC F LS++A Sbjct: 58 DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109 Query: 123 GEIASILDGIPLSVQRRFP 141 ++S LD IPLS+QR+FP Sbjct: 110 MALSSTLDSIPLSMQRQFP 128 >UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M4E7_NEISI Length = 163 Score = 83.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 25/169 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGK-GNEVLYDSAAVIRWYAERDAEIEN 59 M+VNK+QLADI G + + + NWQ++G+PV K G YD+ AVIRW +R+ E N Sbjct: 1 MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANEYDTVAVIRWMFQRELERLN 60 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 + E R RL R +A+ EL+ ++ A Sbjct: 61 K----------------------EKPRDRLDRVKAELAELERDEKLGQLAPAAMFERAWG 98 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALD 166 + +P + + D + I +A+ K + Sbjct: 99 DHVLAARTEFLTMPEQLAAELTATSGVEIDPDTIAAYINRALEKLSNYG 147 >UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of terminase-like protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WZU0_OCHA4 Length = 173 Score = 76.9 bits (187), Expect = 4e-13, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 10/161 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 ++K + + S + GMPV R G D A W +E N Sbjct: 20 ISKSGFSKLINVSPGRVSQMITAGMPVERDGKI------DVARCKLWISEN----INPTR 69 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + Q ++ ER RL +AQADA ELKNA E+V + + S Sbjct: 70 AASQAQGATLFGEEKQAISLTAERARLAKAQADAVELKNATIRRELVSASEVERLWSGEW 129 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 ++ S + +P +++ P L ++ + ++ + + + Sbjct: 130 MQLRSSVLAVPSRLRQLLPHLTAEDIEAIDGELRRMLTEFG 170 >UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of terminase-like protein n=2 Tax=Rhodobacter RepID=A4WNS7_RHOS5 Length = 163 Score = 69.2 bits (167), Expect = 8e-11, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 18/166 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 + + L ++ + + + +++G+ V RG YD AA + Y I Sbjct: 15 LRIGASDLCELLSLTPGALSDLKKRGIAVHRGHD-----AYDLAATVTAYVVHLRGIAAG 69 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + E ++ ER RL + QADAQ LKN E+V + S Sbjct: 70 RGGEEH------------TASLTAERARLAKEQADAQALKNGALRGELVAASEVERAWSD 117 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166 ++ S + +P + R+ L VD L R++ A+ + D Sbjct: 118 TLRKVRSRILAVPSRL-RQVVTLAPAEVDALDRELRDALMELGNAD 162 >UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW78_9BRAD Length = 151 Score = 65.7 bits (158), Expect = 7e-10, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V KQLAD+ G + ++ Q+ G V+ G+ Y IR Y E Sbjct: 5 VTAKQLADLIGITTEHVRRHQQAG--VVFKTGRDK---YLLRESIRGYCEH--------- 50 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + D T+ ER R R AD LKNA E+V + I Sbjct: 51 ---LRGVASGRGGDSAVATLTAERARQAREHADNTALKNAALRKELVPATDVVRGWADIL 107 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLK 152 ++ + L +P V ++ P L + + Sbjct: 108 TKVRAALLAVPSRVWQQAPHLTAEDKNIID 137 >UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK71_RHOVA Length = 174 Score = 64.9 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 19/160 (11%) Query: 7 QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREV 66 +L++ G S + I+ G+ G+ Y A +R +A+ Sbjct: 34 ELSEWLGVSNQRIREMARAGLIPTITPGR-----YKLKAAVRAWADWQRT---------- 78 Query: 67 EELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 Q + + R A AD EL N E++ + + + ++ Sbjct: 79 ----SRPGMGSQSLALTAAKTRAAEATADKLELHNQAARRELIAASDVERAWATVLRDVR 134 Query: 127 SILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166 + + +P VQ+R L + + +I A+++AA + Sbjct: 135 AGMLSVPSRVQQRMGHLTKHDILAIDAEIRTALSEAAHAE 174 >UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio harveyi group RepID=A7MWA4_VIBHB Length = 200 Score = 63.8 bits (153), Expect = 3e-09, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 8/173 (4%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 + + +A + G S R ++N +QG+ + G G + L + A I + ++ + Sbjct: 10 KFTQLDIATLLGISSRQVRNLTQQGVLPVAKGRNGIDPLACTHAYITYKSQAKTSDSKPE 69 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 +E EE E DL IE R +L +A K L ++ Sbjct: 70 TEQENEEAFAKLERDL---KIEERREKLAMLKA-----KRVLFEKTYAPIDTIVDTLEQV 121 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLS 174 + + LD + ++ +P++ V+ L+ I +N+ A + + + Sbjct: 122 CARVGTRLDTLLPKLKNAWPDMPPEAVEVLEAVIAAVLNECADVQPNLSDYID 174 >UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR38_9GAMM Length = 181 Score = 63.4 bits (152), Expect = 4e-09, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 59/169 (34%), Gaps = 17/169 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 + + K ++A S T+ W ++G PV G G +D AAV+ W +R A +E Sbjct: 3 LRLTKAEMAKALDVSTNTVGAWVKRGCPVQEQGRPGKPYTFDLAAVVSWLTDRPAAAGSE 62 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + R ER L R + A EL+ R VV+ A ++ Sbjct: 63 AEAEDAASYRA-------------ERAALMRVRRQAAELEYQRQRRAVVDRAKAKRLIHE 109 Query: 121 IAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIKAMNKAAAL 165 I +A P V R L R + + + A Sbjct: 110 IGQALAKPWAQWPARVYAEIAAELQADGARVHQVLDRHVHRHLEDLARA 158 >UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QS27_9RHOB Length = 166 Score = 60.7 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 15/167 (8%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M Q+ADI G S + + ++G +L +++ Y+ I+ YA R E Sbjct: 1 MYATASQMADILGMSKQNLAKLTQKG--ILTREENESDLPYNVQNTIQAYALRMRE---- 54 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + A + + ER R T +A+ E+K A EV+ +R Sbjct: 55 ---------QAAGRSGGGEYDLVSERARETYHKANLAEIKAAEARKEVISRNLILSAWAR 105 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167 + S L G+ ++++ P L + ++ + ++ + A+ E Sbjct: 106 VMATSRSRLLGLGSRLRKQMPSLTDEQIEIIDNEVHSTLEHLASGGE 152 >UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodobacter sphaeroides RepID=B9KUZ5_RHOSK Length = 218 Score = 57.2 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 57/163 (34%), Gaps = 7/163 (4%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +N+ QLA F S TI W QGMPV+ G G + W ERDA K Sbjct: 29 LNRAQLARAFSVSENTITKWISQGMPVMSDGQNGVAYEFRLRHCYAWRMERDARARAAKA 88 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTR------AQADAQELKNARDSAEVVETAFCTF 116 + + + A E LT ++A+ + A ++V Sbjct: 89 QGDRLAAQAALAFRNLDEDQAEEEAELTADDLKKWSEAEYHRNRVAEQRGDLVRAGRMRE 148 Query: 117 VLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 +L + + LD +P + F L V L+ A Sbjct: 149 LLEELMVSFGNALDTLPDFCELNF-SLSAEQVAKLQERCDAAR 190 >UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclassified Myoviridae RepID=B0ZSE9_9CAUD Length = 191 Score = 55.7 bits (132), Expect = 8e-07, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 9/135 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V+KK A + G S R I W ++GMP GGGKG + D+ I W R+ + Sbjct: 5 VSKKMFAKMVGKSERWIGKWVDEGMPTAGGGGKGRVLEIDTEDAIDWLIRREVRRQYGDD 64 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E E+ ++ + + L +A+ + ++ +V +L + Sbjct: 65 DDETEDGVGSASAEDRL---------LKKARREKLQIDIDLARRRLVPLDAVGRILQGVG 115 Query: 123 GEIASILDGIPLSVQ 137 A+ LD + + Sbjct: 116 AVFATQLDSLSSRLA 130 >UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VBF6_9RHOB Length = 218 Score = 55.3 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 61/165 (36%), Gaps = 9/165 (5%) Query: 3 VNKKQLADIFGASIRTIQNW---QEQGMPVLRGGGKGNEVLYDSAAVIRWYAERD----- 54 VN+ QLA S TI W E +PVL GG G E + A W R+ Sbjct: 24 VNRYQLAQAMDVSEPTITKWLQDLENPLPVLEVGGNGREYKFRLADCYAWRMARNDAEQL 83 Query: 55 AEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFC 114 A+ E + ++ L + ++ P + R A AD + A E+V + Sbjct: 84 AKDEASRSAAQLALLFRNADDGTDPESFLTARQVKDEADADYARNRAAELRGELVRASRV 143 Query: 115 TFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 + + E + + F L+ VD ++R + + Sbjct: 144 EELFELMIDEFKKSATTLADFCEMEFG-LDPAEVDKIQRRADEVL 187 >UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkholderiales RepID=A9C3K6_DELAS Length = 180 Score = 54.5 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +++ + A + G S + +G+ V G G+E L Y ER + + Sbjct: 11 ISQAEFAALIGVSEARVSQLVSEGVIV--RGDTGHEWLLG-------YCERLRDQAAGR- 60 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + L + ER L R+Q +AQ+LKNA E VL + Sbjct: 61 ----------ASAGLGGLDLVQERAALARSQREAQDLKNAVARGEFAPIGALADVLGLAS 110 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171 + +D I +++ P+L + R + A N+ + + G Sbjct: 111 SAVVDRMDQIEGQLRKACPDLPEDARVTVLRVLADARNEWIRVTSKLIG 159 >UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D597_9RHOB Length = 208 Score = 53.8 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 7/185 (3%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDA----- 55 M VN++Q A S I + EQG+PVL G G + + V W RDA Sbjct: 21 MTVNRRQCATALDVSEPMITRYLEQGLPVLSRGSNGQAYEFQLSEVYAWKMWRDAAARKQ 80 Query: 56 EIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCT 115 + E+ ++ L + + + + A AD + K A E+ T+ Sbjct: 81 DEAAEQAAMQMRMLFRNDDDEESGAGTLTAQEIAQEADADYKRNKAAELRGELTRTSRVR 140 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA-ALDELIPGLLS 174 V + E + + + + F L V+ ++R A+ A LD P ++ Sbjct: 141 EVFEEVLVEFRNQVTTLVDFAEMEF-SLAPDQVEKMQRRCDAALVAARHNLDRAYPSTVA 199 Query: 175 EYNRA 179 + RA Sbjct: 200 QLERA 204 >UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A9IRX2_BORPD Length = 147 Score = 48.4 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Query: 73 SETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGI 132 + ++ ER RL RAQAD EL+ A V V + G I + + + Sbjct: 42 DDAAGTGSVLQRERTRLVRAQADEAELRLAEAKKLVAPIEQYAEVWAHRCGIIRANMLNV 101 Query: 133 PLS-VQRRFPEL-ENRHVDFLKRDIIKAMNKAAA 164 P V + E E+R L+ +II+A+ +A Sbjct: 102 PGRVVSQLLGENDESRFKATLRAEIIEALKASAD 135 >UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACG7_9GAMM Length = 181 Score = 48.0 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 12/131 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V Q A + N V G + Y R + E+ + ++ Sbjct: 10 VTSTQAAAFLDVTKSRFFN-----CGVKPAAKIGRQNYY----CPRELRLKALELASRRV 60 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + + SE E +R R +A+ADA E+KN ++ F +LS +A Sbjct: 61 TSDAPDKAEVSEA---RHRFEIDRARKIKAEADAIEMKNEVRRNNLIPLRFMEILLSGVA 117 Query: 123 GEIASILDGIP 133 + LD IP Sbjct: 118 TDFRQFLDQIP 128 >UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD Length = 193 Score = 47.6 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 13/176 (7%) Query: 2 EVNKKQLADIFGA-SIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 + +KQ+A + G S R ++N +G+ G G D I Y A+ Sbjct: 10 KFTQKQIATLLGLESDRQVRNLINKGILPAXKGRNGM----DPLKCIHAYIAYKAQAG-- 63 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 E + E ER R Q A+ ++N ++ T C + S Sbjct: 64 ----GNAETGTDFDGAEPEVDYEVERALNVREQRRARRIQNELALKTLIPTDVCIHIYSS 119 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY 176 + S + I P L + L+ + +A+ + DE IP L Y Sbjct: 120 LVAAARSKVLAIEGKATTELPGLSVKDRQVLRGLLYEALADLS--DEPIPSSLRAY 173 >UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=B6IPX8_RHOCS Length = 196 Score = 47.2 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVE 67 +A + S R +Q +G+ G YD +R Y + R++ Sbjct: 11 IAKLLDLSERRVQQLSREGVIPKAERG-----AYDLVGAVRGYV---------RYLRDLA 56 Query: 68 ELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 + Q DL ER RL +A+AD EL + ++V A + + + + Sbjct: 57 QRAQGGVADLP-----TERTRLVKAKADLAELDAQQRRGDLVPVAETALAWAAVTARLRA 111 Query: 128 ILDGIPLSVQ 137 L +P + Sbjct: 112 RLITLPDKLA 121 >UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q141S7_BURXL Length = 215 Score = 46.8 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 57/180 (31%), Gaps = 23/180 (12%) Query: 3 VNKKQLADIFGASIRTIQNW--QEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 + K L + G + + + PV + G + +D AAV + E Sbjct: 27 IGKAALCEALGWTRPRLDRRLDGDGNFPVAKRGTRAGGWEFDLAAVRTYLGVAPKEAGEP 86 Query: 61 KLRREVEELRQASETDLQP-------------------GTIEYERHRLTRAQADAQELKN 101 + +A P + R R QA+ E K Sbjct: 87 TPAPASKTQGRAPIDSRTPFAEPKYTVVPPAGVEPVVHAGEQTARQRRDAVQAEILEDKL 146 Query: 102 ARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRR--FPELENRHVDFLKRDIIKAM 159 RD E+V+ VL+ + + LD + V R PE + + D+ +AM Sbjct: 147 RRDRGELVQVEVMRQVLNTMLAHLGKGLDRLSDQVVERCGLPEEYADQIRAVTDDLRRAM 206 >UniRef50_B9D1V0 Putative uncharacterized protein n=1 Tax=Campylobacter rectus RM3267 RepID=B9D1V0_WOLRE Length = 148 Score = 46.8 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 24/164 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M+V K+L+DI + R IQ+ + +G+ G K +D ++ Y E Sbjct: 1 MDVTTKELSDILSLTQRRIQDLENEGVITKIGRNK-----WDLKECVQSYIEYKI----- 50 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + R + A A+ ++L A EVV LS Sbjct: 51 -------------ANATSTYGLTEARAQKEFADAEIKKLILAEKKGEVVPIFKLEKDLSD 97 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164 IA +++ L +P ++ R L + + L +I + + + Sbjct: 98 IASTLSNRLYNLPNKIKMRV-NLSDETQNALNYEIEETLKELKE 140 >UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKR1_9BACT Length = 176 Score = 46.5 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 45/152 (29%), Gaps = 20/152 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 ++ K+ A FG + +T+ W+ G P G+G +D V RW + + Sbjct: 18 LSTKRCAAFFGVTSKTMSEWKRSGCP---QAGRG---WWDPEEVYRWRCGLETD------ 65 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +A+A +E++ + + Sbjct: 66 --------SPDNDGNWQAVKLKAEAEYRKAKAAQEEIRLKVLEGRYIPFEQVEDAWADRL 117 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRD 154 + + G ++ + ++ + + Sbjct: 118 VICRTNMFGWVNTLPPLLEGMSRTEMEKILGE 149 >UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q6ZE75_SYNY3 Length = 177 Score = 46.5 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 13/128 (10%) Query: 7 QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREV 66 +LA G S+RT+Q W + G K YD RWY LR+++ Sbjct: 3 ELAQEAGVSVRTVQTWAKAGY-----FSKQGSNAYDILGYYRWY--------TRSLRQDL 49 Query: 67 EELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 +E + R R + A+A EL+ +VV + ++ Sbjct: 50 DEHKAKVARSDWDTKWREGRARKSLAEASLVELQMQSKVKQVVPIDLVISEIDKVLSSSI 109 Query: 127 SILDGIPL 134 + +P Sbjct: 110 RLFRDLPS 117 >UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSD8_OPITP Length = 233 Score = 45.7 bits (106), Expect = 8e-04, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%) Query: 1 MEVNKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M +N QLA+ FG + +++W +G+P +R G+ +++D A V+ W AER + Sbjct: 1 MYLNVIQLAESFGVAESVVESWIRDEGLPCVRDSGR---LMFDRAQVVAWAAERGLVAKA 57 Query: 60 EKLRREVEELRQAS 73 L + AS Sbjct: 58 GFLADQPAAAGPAS 71 >UniRef50_UPI0001A443EF hypothetical protein PcarcW_19609 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A443EF Length = 167 Score = 45.3 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 26/174 (14%) Query: 1 MEVNKKQLADIFGASIRTIQN-WQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M ++ + +A +G TI+ W ++GMP D + + Sbjct: 1 MALSYRSIAKQYGYDESTIRQSWAKKGMP-------------DPKSSTELEVRQWIVTNI 47 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 R+ + Q I+ ER R A+A+ E+ + E++E LS Sbjct: 48 LNPLRDTDTQEQ----------IQRERLRKLTAEAEQAEISVRQCMDELIEITVVQNELS 97 Query: 120 RIAGEIASILDGIPLSVQRRFPELENR--HVDFLKRDIIKAMNKAAALDELIPG 171 I L IP E E L+ I + +N+ + +P Sbjct: 98 SYLKRIRDHLRTIPNKTYLELCEQEKAIDIKRVLQSRIDEVLNECGRFNYELPQ 151 >UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUY4_9PLAN Length = 180 Score = 45.3 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 27/161 (16%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWY-AERDAEIENEKL 62 + + A FG + RTI+ W+ +G PV+ G Y A+ +W AER+A+ E Sbjct: 18 TQARAAAFFGVNPRTIKEWRRRGAPVIETGIANAPYRYALGAISQWLIAEREAQAAKEAP 77 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAE---VVETAFCTFVLS 119 +L ER +L + Q A +L N + +V T C + Sbjct: 78 SASGSDL---------------ERQKL-QEQVRALQLGNDLRQTKYVRLVNTLVCRKAVE 121 Query: 120 RIAG----EIASILDGIPLSVQRRFPELENRHVDFLKRDII 156 + +I + + +P + P ++ D L+ + Sbjct: 122 KTFKWSCDKIRNRCESLPSEIVATMP---AKYRDDLQEEAA 159 >UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LD26_ECO55 Length = 173 Score = 44.9 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 32/167 (19%) Query: 7 QLADIFGASIRTIQ-NWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRRE 65 ++A+ G + T+ W ++GMP + K + +I+ D + + Sbjct: 9 EIAERMGVNDSTVSREWAKRGMPHPKKASKKEIDQWILINIIQPLRNTDVKEQ------- 61 Query: 66 VEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125 IE E+ R +AD E++ + +V+ T + T L+ + Sbjct: 62 ----------------IEKEKLRKISLEADLVEIELNISTEKVLSTDYVTQTLTGYFAAL 105 Query: 126 ASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 +L IP S+ E E+ +K + +DE + GL Sbjct: 106 RGVLRSIPASIYVELFESEDADTLRIKLE--------ERIDEKLRGL 144 >UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter oxydans RepID=Q5FNI0_GLUOX Length = 200 Score = 44.9 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%) Query: 3 VNKKQLADIFGASIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 +NK Q+A S+ T+ NW ++ P G G ++ AV + A R E E Sbjct: 9 LNKAQMAKRLKVSLPTLTNWIDRWPDFPADHRGTNGKSWRFNPHAVFDFLAARREEEEKA 68 Query: 61 KLRREVEELRQASETDLQPGTIEYERHR---LTRAQADAQELKNARDS-----AEVVETA 112 + R+ + + + D E T+ Q D L++ + ++V Sbjct: 69 TIGRDEKLMELQLQFDDLFAEEEQPARSGFVSTKEQIDIWRLRDLKRKEAERCGKLVIAD 128 Query: 113 FCTFVLSRIAGEIA 126 +++ +A Sbjct: 129 QMQDMMATAFAMLA 142 >UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax=Rhizobium etli Kim 5 RepID=UPI000190538F Length = 126 Score = 43.4 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 31/96 (32%), Gaps = 10/96 (10%) Query: 38 EVLYDSAAVIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQ 97 D V+RW +R EI E+ ++ + + + R AQA Sbjct: 1 SWELDLGDVVRWLEDRAGEIAAERFGA----------SEDGKTSEDEAKRRRAVAQAVVA 50 Query: 98 ELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133 EL V+ A + S I L IP Sbjct: 51 ELDMLERLRSVIPIADVLDLWSTDYAAIRDKLMSIP 86 >UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J9F0_AGRRK Length = 214 Score = 43.0 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 39/105 (37%), Gaps = 1/105 (0%) Query: 68 ELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 L A ER + + +E+ +EV+ S A ++ + Sbjct: 102 RLVAAGRVKEAESPHATERLKSATVERQIREIALKNLKSEVLTLEEIDGAWSTFASQLKA 161 Query: 128 ILDGIPLSVQRRFPELENRHVDFLKRDIIKAM-NKAAALDELIPG 171 ++ +P V+ R P + + L+ + + + AA +D + G Sbjct: 162 VMLAVPGKVRSRIPHITAHDQETLRTIVKDMLVDLAAEVDASVIG 206 >UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3T3_DESRM Length = 183 Score = 41.8 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 27/169 (15%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V +LA I G S I+ G+ G GK YD A+ ++ Y + +++ Sbjct: 9 VGTSELALILGLSDSRIRQLDRSGIITKVGRGK-----YDLASAVQGYCNYLKDAASQEG 63 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E+ L R + EL+ E+ VL+ + Sbjct: 64 L--------------------SEKDLLDRTRRKKLELEIQIMQGELHRAEDVKRVLNDML 103 Query: 123 GEIASILDGIPLSVQ-RRFPELE-NRHVDFLKRDIIKAMNKAAALDELI 169 G + IP + + + E + +K+ I +A+++ + + + Sbjct: 104 GAFRARCLAIPHKLAPQLLGKKELPSIQEGIKKAIYEALSELSDYNPRV 152 >UniRef50_Q73IA8 Putative uncharacterized protein n=7 Tax=root RepID=Q73IA8_WOLPM Length = 163 Score = 41.8 bits (96), Expect = 0.011, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 11/163 (6%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 ++ + + A G S + + ++G+ L G E ++ A IR ++ E Sbjct: 5 KITQTEWARELGVSKQYVCYLVKKGIVELEDGLIDREQANEAVAAIRDPSQPLRRKNPEG 64 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 +L + E ER RL A+A A+ E++ + Sbjct: 65 EEVGNNKL--SMMLLKTRIKNEMERGRLLEAKAKAE-------IGELISVEEVKTEAFNV 115 Query: 122 AGEIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKA 162 A + + L IP V + + + L +I A+ + Sbjct: 116 ARVVRNNLLNIPDRVSALLASINDTEKIHETLTEEIRTALEEL 158 >UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Escherichia coli SE11 RepID=B6I861_ECOSE Length = 188 Score = 41.4 bits (95), Expect = 0.016, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 60/173 (34%), Gaps = 15/173 (8%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 ++ ++A S R +++ + G PV +G G + D A R I + Sbjct: 3 SQAEVAAHLLLSDRRLRDLAKLPGAPVPQGRG---DWELD--------AWRHFYIHYLRS 51 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDS---AEVVETAFCTFVLS 119 R E E+ + + + + + +S Sbjct: 52 NRRDTVGTDEPEVGDNSPEKNREQWLKNEERQERILMARVKRRILAKRYAPIELISVAVS 111 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 R+A E+ + ++ P +++ +PE+ L+ ++ A+N+ A + Sbjct: 112 RVAVELRTRVESWPPRLKKVWPEMPQEASSVLREELAIALNELADIRVDFSDY 164 >UniRef50_A5V8D7 Putative uncharacterized protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8D7_SPHWW Length = 229 Score = 40.3 bits (92), Expect = 0.030, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 11/170 (6%) Query: 4 NKKQLADIFGA-SIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIRWYAE-RDAEIEN 59 N +LA + G S TI+ ++ P+L G +G D A + E + E Sbjct: 16 NLSELAMMPGMPSEPTIKKLIDENPDFPILTRGDRGVAWEIDLVAAATFIRELQRRAEER 75 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRA------QADAQELKNARDSAEVVETAF 113 + R +I +R LT A + + +K A E++ Sbjct: 76 ARARAAEVNQLGLDLLGADAASIRTDRVELTSADRRALMEEELVAIKLAEKRGELIRKDE 135 Query: 114 CTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +S++A L + +R +L L++ I A Sbjct: 136 AEQAISKLAVAFVERLSSLVARASKRV-DLPRETQVQLQKLIDGDRTWIA 184 >UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteurellaceae RepID=B8F4L1_HAEPS Length = 170 Score = 40.3 bits (92), Expect = 0.031, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 67/165 (40%), Gaps = 28/165 (16%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIE-- 58 +++N Q+A++ G +T+ P L K ++ Y+ RD + Sbjct: 22 LKLNINQIAEVTGLHRQTVSQRVAGLTPSLGSNSK-----------LKLYSLRDLILTGL 70 Query: 59 NEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVL 118 EK+ +V+ L R QA+ + LK R++ E++ + + Sbjct: 71 TEKMSADVDSL--------------SPNDRRAFWQAENERLKYERETRELIPAFEVSQEM 116 Query: 119 SRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 S +A + L+ +P ++R L+ + + +++ I ++ A Sbjct: 117 SILAKAVVQTLETLPDILERDCG-LQPKDLIRVQQVIDDIRDQMA 160 >UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AY59_RUMGN Length = 180 Score = 39.9 bits (91), Expect = 0.041, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 18/169 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M+VN+K+LA I G + R ++ + + G+ + + Y + Y E E Sbjct: 1 MDVNQKELAAILGITDRRVRQLKNEFGLFSKGLSSEKKQKNYVLEKCVPEYINYKLEAEV 60 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 ++ E E+ + + LK + E+ E L+ Sbjct: 61 QQG---------------TGYNKEKEQAEHEQIKKKISILKLRKLKRELHEADDVEEFLT 105 Query: 120 RIAGEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166 + + L +P V + N +D L+R+I + + + + D Sbjct: 106 DMLVNFKNRLLSVPQKVAPLIVSEDDVNVILDILEREIFQTLEELSEYD 154 >UniRef50_A0L5S8 Transcriptional regulator, Fis family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5S8_MAGSM Length = 292 Score = 39.9 bits (91), Expect = 0.043, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 2/100 (2%) Query: 71 QASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILD 130 + + ER +L AQ + E++ R E++ +A + L Sbjct: 184 ASRHKSKGGLDLTTERAKLAAAQREKTEIEVTRLRGELIPADEVKQAAFALARRVRDRLM 243 Query: 131 GIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDEL 168 +P + N ++ + +A+ + A Sbjct: 244 LVPHRLAVTLAADPNPAAMEQKMEESLREALEELADRAHD 283 >UniRef50_Q1WDJ1 Putative uncharacterized protein n=1 Tax=Streptomyces phage mu1/6 RepID=Q1WDJ1_9CAUD Length = 81 Score = 39.5 bits (90), Expect = 0.053, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + ++Q+ +G S T+ W +G PV+R +D A V W AE+ A ++ Sbjct: 12 LQQQQVQAHYGVSDWTVNQWVRKGCPVVRLPNGHRR--FDLAEVKAWMAEQSATGREQRR 69 Query: 63 RREVEELRQAS 73 R+ L Q S Sbjct: 70 RQSEHALSQRS 80 >UniRef50_UPI00005A316F PREDICTED: similar to CG12600-PA isoform 3 n=1 Tax=Canis lupus familiaris RepID=UPI00005A316F Length = 805 Score = 39.5 bits (90), Expect = 0.065, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Query: 28 PVLRGGGKGNEV------LYDSAAVIRWYAERDAEIEN-EKLRREVEELRQASETDLQPG 80 PVLR V D A + + + E++ LR+++EEL+ ET+L PG Sbjct: 686 PVLRRTAPERPVRTSLDLELDLQASLTRQSRLNDELQALRGLRQKLEELKAQGETELPPG 745 Query: 81 TIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQ 137 +E ER + QA+ Q ++ + + + +S+ + +P VQ Sbjct: 746 VLEDERFQKLLKQAEKQAEQSKEEQKQGLNAEKLMRQVSKDVCRLREQSRKVPRQVQ 802 >UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2V9_9BACT Length = 267 Score = 39.1 bits (89), Expect = 0.079, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 17/156 (10%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRRE 65 +++ ++FG S RTI+ W EQG+ + N+ YD A+ ++ RD + +R+ Sbjct: 31 REIKELFGLSERTIRRWTEQGI-IQGTPALNNDFTYDFQALTQFRRVRDLRAQGHSIRQI 89 Query: 66 VEELRQASETDLQPGTIEYERHRLTRAQADAQELKN----------ARDSAEVVETAFCT 115 EL+ + R R +A + +N A D+ + V A+C Sbjct: 90 EAELQGQLNLFRRVEENRIARLRTPFEEALVLDDQNDPRAIESYLEAIDNGDNVAEAYCN 149 Query: 116 F-VLSRIAGEIASILDGIPLSVQRRFPELENRHVDF 150 ++++ G + LD L+++ E RHV+ Sbjct: 150 LGIINKDLGNVGVALDNFTLALKH-----EPRHVEA 180 >UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=B7LNB9_ESCF3 Length = 172 Score = 38.7 bits (88), Expect = 0.098, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 42/109 (38%), Gaps = 15/109 (13%) Query: 67 EELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 E L + + +L R Q++ + LK +++ E++ + + + +A + Sbjct: 58 ELLGRTTTPELVAVDKMTPPDRKAWFQSERERLKFQQETGELIPASEVSREFASMAKAVV 117 Query: 127 SILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSE 175 +L+ +P D L+RD + + ++I L + Sbjct: 118 QVLETLP---------------DILERDCAMTPSAVVRVQKVIDDLRDQ 151 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS... 173 3e-42 UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS... 158 1e-37 UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O6431... 137 2e-31 UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enter... 129 5e-29 UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH 123 2e-27 UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepI... 121 1e-26 UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=1... 118 7e-26 UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root Rep... 114 1e-24 UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID... 114 2e-24 UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitroba... 111 1e-23 UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio ... 110 3e-23 UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of termi... 108 1e-22 UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. E... 107 2e-22 UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella ... 103 3e-21 UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreic... 103 4e-21 UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD 99 4e-20 UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of term... 99 4e-20 UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polarom... 100 4e-20 UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodoba... 97 3e-19 UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodoba... 96 4e-19 UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenz... 96 6e-19 UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of term... 94 2e-18 UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 ... 92 9e-18 UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomi... 92 1e-17 UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalk... 91 1e-17 UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethios... 89 7e-17 UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitroba... 89 8e-17 UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongk... 88 1e-16 UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae... 88 2e-16 UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of termi... 87 3e-16 UniRef50_B9D1V0 Putative uncharacterized protein n=1 Tax=Campylo... 85 9e-16 UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkhol... 83 5e-15 UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkhol... 80 3e-14 UniRef50_UPI0001A443EF hypothetical protein PcarcW_19609 n=1 Tax... 80 6e-14 UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclass... 78 2e-13 UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax... 75 1e-12 UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escheri... 73 4e-12 UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congreg... 72 1e-11 UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter ... 70 4e-11 UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastop... 68 1e-10 UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkhol... 67 3e-10 UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphapr... 66 8e-10 UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protei... 50 5e-05 Sequences not found previously or not previously below threshold: UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminoc... 70 6e-11 UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfo... 67 3e-10 UniRef50_C9MV79 Transcriptional regulator, MerR family n=2 Tax=F... 64 2e-09 UniRef50_B2V2A8 Putative uncharacterized protein n=1 Tax=Clostri... 64 2e-09 UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Esc... 63 7e-09 UniRef50_C7H6G3 Putative uncharacterized protein n=2 Tax=Clostri... 61 2e-08 UniRef50_A0L5S8 Transcriptional regulator, Fis family n=1 Tax=Ma... 60 3e-08 UniRef50_B0PEX8 Putative uncharacterized protein n=1 Tax=Anaerot... 60 3e-08 UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francis... 59 7e-08 UniRef50_C2BG35 Putative uncharacterized protein n=1 Tax=Anaeroc... 59 1e-07 UniRef50_Q0BEI9 Putative uncharacterized protein n=11 Tax=Burkho... 58 2e-07 UniRef50_A7MG09 Putative uncharacterized protein n=1 Tax=Cronoba... 55 2e-06 UniRef50_Q73IA8 Putative uncharacterized protein n=7 Tax=root Re... 54 3e-06 UniRef50_B6IMM8 Putative uncharacterized protein n=1 Tax=Rhodosp... 53 6e-06 UniRef50_A8GLM5 Putative uncharacterized protein n=1 Tax=Serrati... 52 1e-05 UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax... 51 3e-05 UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobac... 51 3e-05 UniRef50_B0P604 Putative uncharacterized protein n=1 Tax=Anaerot... 50 4e-05 UniRef50_D1Y312 Putative uncharacterized protein n=1 Tax=Pyramid... 50 5e-05 UniRef50_B8L8I9 Putative uncharacterized protein n=1 Tax=Stenotr... 49 9e-05 UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteur... 48 2e-04 UniRef50_A5Z445 Putative uncharacterized protein n=1 Tax=Eubacte... 48 2e-04 UniRef50_B0U9E3 Putative uncharacterized protein n=1 Tax=Methylo... 47 4e-04 UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmati... 46 6e-04 UniRef50_C7G5Z1 Putative uncharacterized protein n=1 Tax=Rosebur... 46 6e-04 UniRef50_B2UKQ5 Putative uncharacterized protein n=1 Tax=Akkerma... 46 7e-04 UniRef50_B4CXQ2 Putative uncharacterized protein n=1 Tax=Chthoni... 45 0.001 UniRef50_Q830E1 Conserved domain protein n=7 Tax=Enterococcus fa... 45 0.001 UniRef50_Q2W853 Putative uncharacterized protein n=5 Tax=Proteob... 45 0.001 UniRef50_Q2SAJ6 Putative uncharacterized protein n=2 Tax=Proteob... 45 0.001 UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterob... 44 0.002 UniRef50_A4U1Y8 BACTERIOPHAGE-RELATED PROTEIN n=2 Tax=Magnetospi... 44 0.003 UniRef50_B3H0X8 Putative uncharacterized protein n=4 Tax=Pasteur... 44 0.003 UniRef50_C0A450 Putative uncharacterized protein n=1 Tax=Opituta... 44 0.003 UniRef50_B2JD13 Putative uncharacterized protein n=2 Tax=Burkhol... 44 0.003 UniRef50_C1CPH0 Transcriptional regulator, AlpA family n=4 Tax=S... 44 0.003 UniRef50_C0PVV4 Gifsy-2 prophage protein n=12 Tax=Salmonella ent... 44 0.004 UniRef50_A3LLS2 Putative uncharacterized protein n=1 Tax=Pseudom... 43 0.004 UniRef50_Q89JP3 Bll5240 protein n=1 Tax=Bradyrhizobium japonicum... 43 0.005 UniRef50_Q72A11 Putative uncharacterized protein n=2 Tax=Desulfo... 43 0.005 UniRef50_C8TRT6 Predicted terminase small subunit n=10 Tax=root ... 43 0.006 UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=unc... 43 0.006 UniRef50_Q48KF6 Putative uncharacterized protein n=1 Tax=Pseudom... 43 0.007 UniRef50_Q7P8F8 Putative uncharacterized protein FNV2232 n=1 Tax... 43 0.008 UniRef50_Q253V9 Phosphotransferase system mannitol/fructose-spec... 42 0.008 UniRef50_D1AA53 N-6 DNA methylase n=1 Tax=Thermomonospora curvat... 42 0.009 UniRef50_C8NRQ9 Putative uncharacterized protein n=2 Tax=Coryneb... 42 0.013 UniRef50_Q87B59 Phage-related protein n=7 Tax=Xylella fastidiosa... 41 0.014 UniRef50_A0NRU5 Putative uncharacterized protein n=1 Tax=Labrenz... 41 0.015 UniRef50_C1YUG4 Predicted transcriptional regulator n=3 Tax=Acti... 41 0.015 UniRef50_A6XRQ1 Putative uncharacterized protein n=1 Tax=Vibrio ... 41 0.016 UniRef50_Q6VY86 Putative uncharacterized protein n=1 Tax=Strepto... 41 0.017 UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1... 41 0.017 UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylo... 41 0.026 UniRef50_Q53574 Putative uncharacterized protein orf G n=1 Tax=S... 41 0.027 UniRef50_A0L9B4 Putative uncharacterized protein n=5 Tax=Proteob... 41 0.027 UniRef50_B4W6T3 Putative uncharacterized protein n=2 Tax=Brevund... 41 0.028 UniRef50_C4S5Y0 DNA-directed RNA polymerase, sigma subunit (Sigm... 40 0.046 UniRef50_B2UKR7 Putative uncharacterized protein n=1 Tax=Akkerma... 39 0.052 UniRef50_Q72FM0 Putative uncharacterized protein n=3 Tax=Desulfo... 39 0.056 UniRef50_A6T1Q6 Uncharacterized conserved protein (Phage-related... 39 0.058 UniRef50_C7VU90 Predicted protein n=3 Tax=Enterococcus RepID=C7V... 39 0.059 UniRef50_A2RGV6 Putative DNA-binding phage protein n=1 Tax=Strep... 39 0.060 UniRef50_D2C287 Putative uncharacterized protein n=1 Tax=Dickeya... 39 0.063 UniRef50_Q5KVB2 Chromosome-anchoring protein racA n=7 Tax=Geobac... 39 0.064 UniRef50_C7LSU4 Putative PTS IIA-like nitrogen-regulatory protei... 39 0.071 UniRef50_Q1WDJ1 Putative uncharacterized protein n=1 Tax=Strepto... 39 0.073 UniRef50_Q398F6 Putative uncharacterized protein n=1 Tax=Burkhol... 39 0.074 UniRef50_A0LBP8 Putative uncharacterized protein n=2 Tax=Magneto... 39 0.085 UniRef50_D0XJ07 Putative uncharacterized protein n=1 Tax=Brevund... 39 0.086 UniRef50_B7SYD2 Gp3 n=1 Tax=Stenotrophomonas phage S1 RepID=B7SY... 39 0.087 UniRef50_Q1NUW0 Excisionase/Xis, DNA-binding n=1 Tax=delta prote... 39 0.092 >UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS_LAMBD Length = 181 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 173/178 (97%), Positives = 175/178 (98%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVI+WYAERDAEIENE Sbjct: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLRREVEELRQASE DLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR Sbjct: 61 KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNR 178 IAGEIASILDG+PLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY Sbjct: 121 IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIE 178 >UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS_BPP21 Length = 182 Score = 158 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 95/180 (52%), Positives = 136/180 (75%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M+VNKK+LA+IF RTI+ WQ QG+P G KG E ++D+A I+WYA+R+ +IENE Sbjct: 1 MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRETDIENE 60 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLR+E+++LR A+E+DLQPGTI+YER+RLT+AQADAQELKNAR+ V+ET TF+L R Sbjct: 61 KLRKELDDLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRAD 180 +A EI+ IL +PL++QR++P++ H+D +K +I KA N AA E + G + ++ RA+ Sbjct: 121 VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE 180 >UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O64316_BPN15 Length = 168 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 92/175 (52%), Positives = 114/175 (65%), Gaps = 16/175 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +NK +A G S++ W Q PV + +G EV +D +V+ E + Sbjct: 5 LNKSDMASSLGISVQAFDKWGVQ--PVEK---RGREVFFDVRSVVDNRLENQSR------ 53 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +L+ + D I+YER RLTRA ADA EL N + EVVETAFCTFVLSRIA Sbjct: 54 -----KLQPSPGDDDDGVNIDYERWRLTRANADAAELANEKKRREVVETAFCTFVLSRIA 108 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYN 177 EI+SILDGIPLS+QRRFPELENRH++FLK D+IKAMNKAAALDE IPGLL++Y Sbjct: 109 AEISSILDGIPLSMQRRFPELENRHIEFLKGDVIKAMNKAAALDERIPGLLNDYI 163 >UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enterobacteriaceae RepID=B7ULU1_ECO27 Length = 169 Score = 129 bits (324), Expect = 5e-29, Method: Composition-based stats. Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 14/177 (7%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + ++A + R ++ Q+ G P+ G D A +Y +N+ Sbjct: 3 TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E D + R LT QA Q+LKN ++++T FC F LS++A Sbjct: 58 DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRA 179 ++S LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EY RA Sbjct: 110 MALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRA 166 >UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH Length = 159 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 16/172 (9%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVE 67 +A G S++ W G+P + +G EVLYD V+ +R+ N++ + Sbjct: 1 MASSIGISVQAFDKW---GVPPVER--RGREVLYDVKTVLE--IDRERRQHNQRTPDD-- 51 Query: 68 ELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 + R LT QA AQ+LKN +++++ FC F LS++A ++S Sbjct: 52 -------GGELEERLLRARAELTEEQAVAQKLKNQVTEGKLIDSDFCVFALSKLAMALSS 104 Query: 128 ILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRA 179 LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EY RA Sbjct: 105 TLDSIPLSMQRQFPDLTPRHIDHLKTLIAKGANQCARAGDKLPDLLDEYIRA 156 >UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepID=A6X1C0_OCHA4 Length = 302 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 18/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 E+ LA+I G S R I ++ E+G+ V G + +D ++ Y E I + Sbjct: 128 EITAADLAEILGVSKRAISDYVERGIIVKTGRNR-----FDLRKSVQLYCEHLRGIAAGR 182 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 V+ L ER RL R QAD L+NA E+V A I Sbjct: 183 GGDNVDTLA-------------TERARLAREQADQAALRNAAMRKELVPIAEVRNEWVSI 229 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDEL 168 A + +++ +P ++ P L VD + +I A+ + D+ Sbjct: 230 ARRVRNVMMAVPSRCRQMLPHLTTFDVDLIDEEIRTALTELGEKDDD 276 >UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=16 Tax=Enterobacteriaceae RepID=A1Z2S0_ECOLX Length = 180 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 98/177 (55%), Gaps = 19/177 (10%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERD-AEIENEK 61 +NKK +A S W V KG E YD A+VI +++ N+K Sbjct: 6 MNKKNMAKSCRVSATAFDKWG-----VTPVERKGREAFYDVASVIENRVNNAISQLINDK 60 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + +EL + R RL AQA+AQELKN RD +V++T FC + LS++ Sbjct: 61 GEIDDDELLRV-------------RIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSKL 107 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNR 178 A +I+SI+D +PL++QR FP++ +D LKR+++KA N +A + + +P +L++Y + Sbjct: 108 ASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADYLK 164 >UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root RepID=B3G2H2_PSEAE Length = 169 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 11/175 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +NK ++A G S + W Q P+ R G E Y A V+ + A + + Sbjct: 1 MNKSEMASSLGISPQAFDKWGVQ--PIER---IGREAFYTVADVVENRIQHAARKQQPEG 55 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + R LTRAQ AQE KN + +V F T+ L++IA Sbjct: 56 E------LPEGVDPYVEAKLMQARLELTRAQTYAQEQKNQVNDKLLVPVPFATYALAKIA 109 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYN 177 +I S L+ + +V +R PE++ ++ +R+I A N +A + +PG L EY Sbjct: 110 AKIGSKLETVGKTVSQRHPEMDPLILEAFEREIALARNLSADFGDDLPGYLDEYL 164 >UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID=A6WJC0_SHEB8 Length = 177 Score = 114 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 16/179 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 ++K L S + W +PV G LY A V+ + + Sbjct: 14 LSKTDLCKSLEISTQAFDKW---DVPV--HSKLGRVCLYKMADVVGNRLANERK------ 62 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + + E D ++YER RL RAQA QE+KN +D EVVE F TFVL+RIA Sbjct: 63 ----KTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIA 118 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYN-RAD 180 +IA +LD I + V+R+FP++ R +D +K ++IK+ N AA L E I GLL EY RAD Sbjct: 119 AQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYIGRAD 177 >UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitrobacter hamburgensis X14 RepID=Q1QKR3_NITHX Length = 182 Score = 111 bits (278), Expect = 1e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 17/179 (9%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 EV+ K+LA++FG S R+++ ++G ++ +G Y ++ Y + + Sbjct: 10 EVSAKELAELFGISDRSVRELHDRG--TVKKSARGR---YLLTESVQLYTAHLRGVAAGR 64 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + + ER RL + QADA LKNA E+V + + Sbjct: 65 ------------GGEGGVLDLTVERARLAKEQADAVSLKNAVMRRELVPVSDVEREWMSV 112 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRAD 180 ++ S + +P V++ P L D + R+I A+ A D + + +D Sbjct: 113 GRQVRSGMLAVPSRVRQSLPHLTAFDADLIDREIRDALTGLADNDSDHEVAVGDVVESD 171 >UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio harveyi group RepID=A7MWA4_VIBHB Length = 200 Score = 110 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 8/173 (4%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 + + +A + G S R ++N +QG+ + G G + L + A I + ++ + Sbjct: 10 KFTQLDIATLLGISSRQVRNLTQQGVLPVAKGRNGIDPLACTHAYITYKSQAKTSDSKPE 69 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 +E EE E DL IE R +L +A K L ++ Sbjct: 70 TEQENEEAFAKLERDL---KIEERREKLAMLKA-----KRVLFEKTYAPIDTIVDTLEQV 121 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLS 174 + + LD + ++ +P++ V+ L+ I +N+ A + + + Sbjct: 122 CARVGTRLDTLLPKLKNAWPDMPPEAVEVLEAVIAAVLNECADVQPNLSDYID 174 >UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of terminase-like protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WZU0_OCHA4 Length = 173 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 10/163 (6%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 ++K + + S + GMPV R G D A W +E N Sbjct: 19 TISKSGFSKLINVSPGRVSQMITAGMPVERDGKI------DVARCKLWISEN----INPT 68 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + + Q ++ ER RL +AQADA ELKNA E+V + + S Sbjct: 69 RAASQAQGATLFGEEKQAISLTAERARLAKAQADAVELKNATIRRELVSASEVERLWSGE 128 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164 ++ S + +P +++ P L ++ + ++ + + + Sbjct: 129 WMQLRSSVLAVPSRLRQLLPHLTAEDIEAIDGELRRMLTEFGN 171 >UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIS8_9ALTE Length = 165 Score = 107 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 24/175 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +N++Q+A ++ W+ V G +V YD+ +V+ + Sbjct: 10 LNQQQMAKSLNLTVSAFARWE-----VEPVARIGKQVFYDAYSVLENRLSKA-------- 56 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 G IE ER RLT AQA+ QELKN ++ T LS +A Sbjct: 57 -----------GPAGSNGDIEAERLRLTSAQAEGQELKNELSKGKIAPIEIITLSLSTVA 105 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYN 177 G A ILD +PL+++R++PEL + ++ +KR +KA N+ + LD ++ L +Y Sbjct: 106 GAAAGILDSLPLNIKRQYPELSAQMIEAIKRQCVKAQNEISRLDSVVVDKLEDYL 160 >UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella fastidiosa RepID=Q87CG5_XYLFT Length = 191 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 18/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 +VN+ L++IFG ++ T+ W G PV++ GG+G E +D+A V RW ++ AE Sbjct: 24 QVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGG 83 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + IE + R A+A +EL A +V L+R+ Sbjct: 84 AVAD----------------IEEWKRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARV 127 Query: 122 AGEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166 E+ + L IP E R+ L ++I + + A+LD Sbjct: 128 FAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD 174 >UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D597_9RHOB Length = 208 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 7/185 (3%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDA----- 55 M VN++Q A S I + EQG+PVL G G + + V W RDA Sbjct: 21 MTVNRRQCATALDVSEPMITRYLEQGLPVLSRGSNGQAYEFQLSEVYAWKMWRDAAARKQ 80 Query: 56 EIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCT 115 + E+ ++ L + + + + A AD + K A E+ T+ Sbjct: 81 DEAAEQAAMQMRMLFRNDDDEESGAGTLTAQEIAQEADADYKRNKAAELRGELTRTSRVR 140 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA-ALDELIPGLLS 174 V + E + + + + F L V+ ++R A+ A LD P ++ Sbjct: 141 EVFEEVLVEFRNQVTTLVDFAEMEF-SLAPDQVEKMQRRCDAALVAARHNLDRAYPSTVA 199 Query: 175 EYNRA 179 + RA Sbjct: 200 QLERA 204 >UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD Length = 193 Score = 99 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 61/177 (34%), Gaps = 13/177 (7%) Query: 2 EVNKKQLADIFGA-SIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 + +KQ+A + G S R ++N +G+ G G D I Y A+ Sbjct: 10 KFTQKQIATLLGLESDRQVRNLINKGILPAXKGRNGM----DPLKCIHAYIAYKAQAG-- 63 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 E + E ER R Q A+ ++N ++ T C + S Sbjct: 64 ----GNAETGTDFDGAEPEVDYEVERALNVREQRRARRIQNELALKTLIPTDVCIHIYSS 119 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYN 177 + S + I P L + L+ + +A+ + DE IP L Y Sbjct: 120 LVAAARSKVLAIEGKATTELPGLSVKDRQVLRGLLYEALADLS--DEPIPSSLRAYL 174 >UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SI57_HAHCH Length = 174 Score = 99 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 76/189 (40%), Gaps = 27/189 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M+VNKKQLADIFG S RT +Q+ P++ G+G YD+ AV + +R Sbjct: 1 MKVNKKQLADIFGISERTFTQYQKDPDFPIVLDAGRGASNQYDTVAVFNFLKDRA----- 55 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 L E R RL R +A+ + L RD E+V + +L Sbjct: 56 -----------------LSGAKFESARDRLDRIRAERETLALGRDLGELVPASELEALLE 98 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDELIPGLLSEYN 177 ++ I + L ++ + V D L +A+ AAL + + Sbjct: 99 QVVTAIKTTLLDSNHILKTELDARYDIDVEPDILDEHSRQALTHLAALGDQYAE--GDSE 156 Query: 178 RADRQYAGG 186 RA+ A G Sbjct: 157 RAEEVPAAG 165 >UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPI8_POLNA Length = 168 Score = 99.6 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 60/174 (34%), Gaps = 27/174 (15%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 ++Q+A +FG + +TI WQ G P+ GG G YDS A I W R+ Sbjct: 5 GQEQIAALFGVAPKTITEWQVLGFPIAFQGGPGVPSEYDSPACITWMVGREV-------- 56 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 E + RL+R Q D E RD ++ + + Sbjct: 57 --------------SKIRSETPKDRLSRLQGDKIERDMMRDDGLLIPASEIEPMWEGAVI 102 Query: 124 EIASILDGIPLSVQ-----RRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 L G P + P LE + ++K N AA+ + G Sbjct: 103 AAREYLLGEPPRIASLSIGMEKPALEELLRTTFEAYLVKLSNWRAAMQDDDEGK 156 >UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VBF6_9RHOB Length = 218 Score = 96.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 9/165 (5%) Query: 3 VNKKQLADIFGASIRTIQNWQE---QGMPVLRGGGKGNEVLYDSAAVIRWYAER-----D 54 VN+ QLA S TI W + +PVL GG G E + A W R Sbjct: 24 VNRYQLAQAMDVSEPTITKWLQDLENPLPVLEVGGNGREYKFRLADCYAWRMARNDAEQL 83 Query: 55 AEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFC 114 A+ E + ++ L + ++ P + R A AD + A E+V + Sbjct: 84 AKDEASRSAAQLALLFRNADDGTDPESFLTARQVKDEADADYARNRAAELRGELVRASRV 143 Query: 115 TFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 + + E + + F L+ VD ++R + + Sbjct: 144 EELFELMIDEFKKSATTLADFCEMEFG-LDPAEVDKIQRRADEVL 187 >UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodobacter sphaeroides RepID=B9KUZ5_RHOSK Length = 218 Score = 96.5 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 59/169 (34%), Gaps = 7/169 (4%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 +N+ QLA F S TI W QGMPV+ G G + W ERDA K Sbjct: 28 TLNRAQLARAFSVSENTITKWISQGMPVMSDGQNGVAYEFRLRHCYAWRMERDARARAAK 87 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTR------AQADAQELKNARDSAEVVETAFCT 115 + + + A E LT ++A+ + A ++V Sbjct: 88 AQGDRLAAQAALAFRNLDEDQAEEEAELTADDLKKWSEAEYHRNRVAEQRGDLVRAGRMR 147 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164 +L + + LD +P + F L V L+ A A A Sbjct: 148 ELLEELMVSFGNALDTLPDFCELNF-SLSAEQVAKLQERCDAARIDARA 195 >UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QS27_9RHOB Length = 166 Score = 96.1 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 15/167 (8%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M Q+ADI G S + + ++G +L +++ Y+ I+ YA R E Sbjct: 1 MYATASQMADILGMSKQNLAKLTQKG--ILTREENESDLPYNVQNTIQAYALRMREQAAG 58 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + + + ER R T +A+ E+K A EV+ +R Sbjct: 59 R-------------SGGGEYDLVSERARETYHKANLAEIKAAEARKEVISRNLILSAWAR 105 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167 + S L G+ ++++ P L + ++ + ++ + A+ E Sbjct: 106 VMATSRSRLLGLGSRLRKQMPSLTDEQIEIIDNEVHSTLEHLASGGE 152 >UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M4E7_NEISI Length = 163 Score = 94.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 25/169 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGG-GKGNEVLYDSAAVIRWYAERDAEIEN 59 M+VNK+QLADI G + + + NWQ++G+PV G YD+ AVIRW +R+ E N Sbjct: 1 MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANEYDTVAVIRWMFQRELERLN 60 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 E R RL R +A+ EL+ ++ A Sbjct: 61 ----------------------KEKPRDRLDRVKAELAELERDEKLGQLAPAAMFERAWG 98 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALD 166 + +P + + D + I +A+ K + Sbjct: 99 DHVLAARTEFLTMPEQLAAELTATSGVEIDPDTIAAYINRALEKLSNYG 147 >UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 homolog n=15 Tax=Enterobacteriaceae RepID=B2TZ59_SHIB3 Length = 139 Score = 91.9 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 14/140 (10%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + ++A + R ++ Q+ G P+ G D A +Y +N+ Sbjct: 3 TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E D + R LT QA Q+LKN ++++T FC F LS++A Sbjct: 58 DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109 Query: 123 GEIASILDGIPLSVQRRFPE 142 ++S LD IPLS+QR+FP Sbjct: 110 MALSSTLDSIPLSMQRQFPG 129 >UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK71_RHOVA Length = 174 Score = 91.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 19/164 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V+ +L++ G S + I+ G+ G+ Y A +R +A+ Sbjct: 30 VSTFELSEWLGVSNQRIREMARAGLIPTITPGR-----YKLKAAVRAWADWQR------- 77 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 Q + + R A AD EL N E++ + + + Sbjct: 78 -------TSRPGMGSQSLALTAAKTRAAEATADKLELHNQAARRELIAASDVERAWATVL 130 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166 ++ + + +P VQ+R L + + +I A+++AA + Sbjct: 131 RDVRAGMLSVPSRVQQRMGHLTKHDILAIDAEIRTALSEAAHAE 174 >UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR38_9GAMM Length = 181 Score = 91.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 59/169 (34%), Gaps = 17/169 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 + + K ++A S T+ W ++G PV G G +D AAV+ W +R A +E Sbjct: 3 LRLTKAEMAKALDVSTNTVGAWVKRGCPVQEQGRPGKPYTFDLAAVVSWLTDRPAAAGSE 62 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + R ER L R + A EL+ R VV+ A ++ Sbjct: 63 AEAEDAASYRA-------------ERAALMRVRRQAAELEYQRQRRAVVDRAKAKRLIHE 109 Query: 121 IAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIKAMNKAAAL 165 I +A P V R L R + + + A Sbjct: 110 IGQALAKPWAQWPARVYAEIAAELQADGARVHQVLDRHVHRHLEDLARA 158 >UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKR1_9BACT Length = 176 Score = 89.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 46/157 (29%), Gaps = 20/157 (12%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 ++ K+ A FG + +T+ W+ G P G +D V RW + + Sbjct: 18 LSTKRCAAFFGVTSKTMSEWKRSGCPQAGRG------WWDPEEVYRWRCGLETD------ 65 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +A+A +E++ + + Sbjct: 66 --------SPDNDGNWQAVKLKAEAEYRKAKAAQEEIRLKVLEGRYIPFEQVEDAWADRL 117 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 + + G ++ + ++ + + I+ + Sbjct: 118 VICRTNMFGWVNTLPPLLEGMSRTEMEKILGEEIRIL 154 >UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW78_9BRAD Length = 151 Score = 88.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 17/150 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V KQLAD+ G + ++ Q+ G V+ G+ Y IR Y E + + + Sbjct: 5 VTAKQLADLIGITTEHVRRHQQAG--VVFKTGRDK---YLLRESIRGYCEHLRGVASGR- 58 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 D T+ ER R R AD LKNA E+V + I Sbjct: 59 -----------GGDSAVATLTAERARQAREHADNTALKNAALRKELVPATDVVRGWADIL 107 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLK 152 ++ + L +P V ++ P L + + Sbjct: 108 TKVRAALLAVPSRVWQQAPHLTAEDKNIID 137 >UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D857_LARHH Length = 171 Score = 88.0 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 24/184 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 VNK++L+ I G S RT+ WQ +GMPV+ G+G+ YD+AAVI+WY R A Sbjct: 5 VNKRELSLILGISERTLTEWQREGMPVVTHTGRGSANQYDTAAVIKWYGARVA------- 57 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E + RL R + D E++ A++ +V L + Sbjct: 58 ---------------NGASKESAKDRLDRLRGDQVEIEIAKELRRLVAIDEIEPALGQFV 102 Query: 123 GEIASILDGIPLSVQRRFPE--LENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRAD 180 + S++ +P E + L+ +I+ + + D Sbjct: 103 ADAVSLMAALPDKYTTVISEAVSPDAIHAVLEDMLIELREQLGNYEFSATLATEPAAPGD 162 Query: 181 RQYA 184 A Sbjct: 163 EAPA 166 >UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae RepID=Q1GH30_SILST Length = 184 Score = 88.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 19/168 (11%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 EVN+ +LA+I G S+ T+ W +G PV++ GG+G +++A V W Sbjct: 12 EVNRAELANINGVSLPTVDEWVRRGCPVVQRGGRGRAWKFNTAEVRSWR----------- 60 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++ +A + T + R A+ + EL AR E+V L++ Sbjct: 61 -----DDDIRAQASHTGMATKDELTLRKLAAETEQAELDLARAKEELVPVEQFDRALAKA 115 Query: 122 AGEIASILDG-IPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166 GE+ + + +P RR E + L ++ + + A D Sbjct: 116 FGEVRAGIRNVLPSRAARRLIGESDETQIKAVLLDEVDQVLEALADTD 163 >UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of terminase-like protein n=2 Tax=Rhodobacter RepID=A4WNS7_RHOS5 Length = 163 Score = 86.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 18/167 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 + + L ++ + + + +++G+ V RG YD AA + Y I Sbjct: 15 LRIGASDLCELLSLTPGALSDLKKRGIAVHRGHD-----AYDLAATVTAYVVHLRGIAAG 69 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + E ++ ER RL + QADAQ LKN E+V + S Sbjct: 70 RGGEEH------------TASLTAERARLAKEQADAQALKNGALRGELVAASEVERAWSD 117 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167 ++ S + +P + R+ L VD L R++ A+ + D Sbjct: 118 TLRKVRSRILAVPSRL-RQVVTLAPAEVDALDRELRDALMELGNADR 163 >UniRef50_B9D1V0 Putative uncharacterized protein n=1 Tax=Campylobacter rectus RM3267 RepID=B9D1V0_WOLRE Length = 148 Score = 85.3 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 24/164 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M+V K+L+DI + R IQ+ + +G+ G K +D ++ Y E Sbjct: 1 MDVTTKELSDILSLTQRRIQDLENEGVITKIGRNK-----WDLKECVQSYIEYKI----- 50 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + R + A A+ ++L A EVV LS Sbjct: 51 -------------ANATSTYGLTEARAQKEFADAEIKKLILAEKKGEVVPIFKLEKDLSD 97 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164 IA +++ L +P ++ R L + + L +I + + + Sbjct: 98 IASTLSNRLYNLPNKIKMRV-NLSDETQNALNYEIEETLKELKE 140 >UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q141S7_BURXL Length = 215 Score = 83.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 57/183 (31%), Gaps = 23/183 (12%) Query: 2 EVNKKQLADIFGASIRTIQNW--QEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 + K L + G + + + PV + G + +D AAV + E Sbjct: 26 TIGKAALCEALGWTRPRLDRRLDGDGNFPVAKRGTRAGGWEFDLAAVRTYLGVAPKEAGE 85 Query: 60 EKLRREVEELRQASETDLQP-------------------GTIEYERHRLTRAQADAQELK 100 + +A P + R R QA+ E K Sbjct: 86 PTPAPASKTQGRAPIDSRTPFAEPKYTVVPPAGVEPVVHAGEQTARQRRDAVQAEILEDK 145 Query: 101 NARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRR--FPELENRHVDFLKRDIIKA 158 RD E+V+ VL+ + + LD + V R PE + + D+ +A Sbjct: 146 LRRDRGELVQVEVMRQVLNTMLAHLGKGLDRLSDQVVERCGLPEEYADQIRAVTDDLRRA 205 Query: 159 MNK 161 M Sbjct: 206 MAD 208 >UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkholderiales RepID=A9C3K6_DELAS Length = 180 Score = 80.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +++ + A + G S + +G+ V G G+E L Y ER + + Sbjct: 11 ISQAEFAALIGVSEARVSQLVSEGVIV--RGDTGHEWLL-------GYCERLRDQAAGR- 60 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + L + ER L R+Q +AQ+LKNA E VL + Sbjct: 61 ----------ASAGLGGLDLVQERAALARSQREAQDLKNAVARGEFAPIGALADVLGLAS 110 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171 + +D I +++ P+L + R + A N+ + + G Sbjct: 111 SAVVDRMDQIEGQLRKACPDLPEDARVTVLRVLADARNEWIRVTSKLIG 159 >UniRef50_UPI0001A443EF hypothetical protein PcarcW_19609 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A443EF Length = 167 Score = 79.5 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 26/174 (14%) Query: 1 MEVNKKQLADIFGASIRTIQN-WQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M ++ + +A +G TI+ W ++GMP D + + Sbjct: 1 MALSYRSIAKQYGYDESTIRQSWAKKGMP-------------DPKSSTELEVRQWIVTNI 47 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 R+ + Q I+ ER R A+A+ E+ + E++E LS Sbjct: 48 LNPLRDTDTQEQ----------IQRERLRKLTAEAEQAEISVRQCMDELIEITVVQNELS 97 Query: 120 RIAGEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELIPG 171 I L IP E E L+ I + +N+ + +P Sbjct: 98 SYLKRIRDHLRTIPNKTYLELCEQEKAIDIKRVLQSRIDEVLNECGRFNYELPQ 151 >UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclassified Myoviridae RepID=B0ZSE9_9CAUD Length = 191 Score = 78.0 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 71/183 (38%), Gaps = 12/183 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V+KK A + G S R I W ++GMP GGGKG + D+ I W R+ + Sbjct: 5 VSKKMFAKMVGKSERWIGKWVDEGMPTAGGGGKGRVLEIDTEDAIDWLIRREVRRQYGDD 64 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E E+ ++ + + L +A+ + ++ +V +L + Sbjct: 65 DDETEDGVGSASAEDRL---------LKKARREKLQIDIDLARRRLVPLDAVGRILQGVG 115 Query: 123 GEIASILDGIPLSVQRRFP--ELENRHVDFLKRDIIKAM-NKAAALDELIPGLLSEYNRA 179 A+ LD + + + + + + + + + A L++ +++E + Sbjct: 116 AVFATQLDSLSSRLASDLAVIDDPAKVRERIHAETRRIRGSTAERLNDAASSIVAELDAL 175 Query: 180 DRQ 182 D Sbjct: 176 DSI 178 >UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q6ZE75_SYNY3 Length = 177 Score = 74.9 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 15/167 (8%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRRE 65 +LA G S+RT+Q W + G K YD RWY + + Sbjct: 2 TELAQEAGVSVRTVQTWAKAGY-----FSKQGSNAYDILGYYRWYTRSLRQ--------D 48 Query: 66 VEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125 ++E + R R + A+A EL+ +VV + ++ Sbjct: 49 LDEHKAKVARSDWDTKWREGRARKSLAEASLVELQMQSKVKQVVPIDLVISEIDKVLSSS 108 Query: 126 ASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 + +P + V + + L Sbjct: 109 IRLFRDLPSYFSAPHCYQSSSEVAAALEQAVSL--ALKDFQSQLVSL 153 >UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LD26_ECO55 Length = 173 Score = 73.4 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 32/172 (18%) Query: 2 EVNKKQLADIFGASIRTI-QNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 ++A+ G + T+ + W ++GMP + K + +I+ D + + Sbjct: 4 RYTTNEIAERMGVNDSTVSREWAKRGMPHPKKASKKEIDQWILINIIQPLRNTDVKEQ-- 61 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 IE E+ R +AD E++ + +V+ T + T L+ Sbjct: 62 ---------------------IEKEKLRKISLEADLVEIELNISTEKVLSTDYVTQTLTG 100 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 + +L IP S+ E E+ +K + +DE + GL Sbjct: 101 YFAALRGVLRSIPASIYVELFESEDADTLRIKLE--------ERIDEKLRGL 144 >UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACG7_9GAMM Length = 181 Score = 71.8 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 12/131 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V Q A + N V G + Y R + E+ + ++ Sbjct: 10 VTSTQAAAFLDVTKSRFFN-----CGVKPAAKIGRQNYY----CPRELRLKALELASRRV 60 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + + SE E +R R +A+ADA E+KN ++ F +LS +A Sbjct: 61 TSDAPDKAEVSEA---RHRFEIDRARKIKAEADAIEMKNEVRRNNLIPLRFMEILLSGVA 117 Query: 123 GEIASILDGIP 133 + LD IP Sbjct: 118 TDFRQFLDQIP 128 >UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter oxydans RepID=Q5FNI0_GLUOX Length = 200 Score = 69.9 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 10/135 (7%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 +NK Q+A S+ T+ NW ++ P G G ++ AV + A R E E Sbjct: 8 TLNKAQMAKRLKVSLPTLTNWIDRWPDFPADHRGTNGKSWRFNPHAVFDFLAARREEEEK 67 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHR---LTRAQADAQELKNARDS-----AEVVET 111 + R+ + + + D E T+ Q D L++ + ++V Sbjct: 68 ATIGRDEKLMELQLQFDDLFAEEEQPARSGFVSTKEQIDIWRLRDLKRKEAERCGKLVIA 127 Query: 112 AFCTFVLSRIAGEIA 126 +++ +A Sbjct: 128 DQMQDMMATAFAMLA 142 >UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AY59_RUMGN Length = 180 Score = 69.5 bits (168), Expect = 6e-11, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 18/170 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M+VN+K+LA I G + R ++ + + G+ + + Y + Y E E Sbjct: 1 MDVNQKELAAILGITDRRVRQLKNEFGLFSKGLSSEKKQKNYVLEKCVPEYINYKLEAEV 60 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 ++ E E+ + + LK + E+ E L+ Sbjct: 61 QQG---------------TGYNKEKEQAEHEQIKKKISILKLRKLKRELHEADDVEEFLT 105 Query: 120 RIAGEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDE 167 + + L +P V ++ +D L+R+I + + + + D Sbjct: 106 DMLVNFKNRLLSVPQKVAPLIVSEDDVNVILDILEREIFQTLEELSEYDP 155 >UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUY4_9PLAN Length = 180 Score = 68.4 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 13/154 (8%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYA-ERDAEIENEKL 62 + + A FG + RTI+ W+ +G PV+ G Y A+ +W ER+A+ E Sbjct: 18 TQARAAAFFGVNPRTIKEWRRRGAPVIETGIANAPYRYALGAISQWLIAEREAQAAKEAP 77 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +L + E+ R + D ++ K R +V Sbjct: 78 SASGSDLERQ---------KLQEQVRALQLGNDLRQTKYVRLVNTLVCRKAVEKTFKWSC 128 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDII 156 +I + + +P + P ++ D L+ + Sbjct: 129 DKIRNRCESLPSEIVATMP---AKYRDDLQEEAA 159 >UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3T3_DESRM Length = 183 Score = 67.2 bits (162), Expect = 3e-10, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 27/169 (15%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V +LA I G S I+ G+ G GK YD A+ ++ Y + +++ Sbjct: 9 VGTSELALILGLSDSRIRQLDRSGIITKVGRGK-----YDLASAVQGYCNYLKDAASQEG 63 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E+ L R + EL+ E+ VL+ + Sbjct: 64 --------------------LSEKDLLDRTRRKKLELEIQIMQGELHRAEDVKRVLNDML 103 Query: 123 GEIASILDGIPLSVQRRFPELE--NRHVDFLKRDIIKAMNKAAALDELI 169 G + IP + + + + +K+ I +A+++ + + + Sbjct: 104 GAFRARCLAIPHKLAPQLLGKKELPSIQEGIKKAIYEALSELSDYNPRV 152 >UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A9IRX2_BORPD Length = 147 Score = 66.8 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 57/160 (35%), Gaps = 28/160 (17%) Query: 7 QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREV 66 QLA + G S R I+ EQG + Y IR + Sbjct: 2 QLAALAGVSARRIRQLAEQGTL-----ERVGRNEYALGPSIRALID-------------- 42 Query: 67 EELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 + ++ ER RL RAQAD EL+ A V V + G I Sbjct: 43 -------DAAGTGSVLQRERTRLVRAQADEAELRLAEAKKLVAPIEQYAEVWAHRCGIIR 95 Query: 127 SILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAA 164 + + +P V + E+R L+ +II+A+ +A Sbjct: 96 ANMLNVPGRVVSQLLGENDESRFKATLRAEIIEALKASAD 135 >UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=B6IPX8_RHOCS Length = 196 Score = 65.7 bits (158), Expect = 8e-10, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 52/157 (33%), Gaps = 21/157 (13%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVE 67 +A + S R +Q +G+ G YD +R Y ++ Sbjct: 11 IAKLLDLSERRVQQLSREGVIPKAERG-----AYDLVGAVRGYVRYLRDLAQR------- 58 Query: 68 ELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 + ER RL +A+AD EL + ++V A + + + + Sbjct: 59 -------AQGGVADLPTERTRLVKAKADLAELDAQQRRGDLVPVAETALAWAAVTARLRA 111 Query: 128 ILDGIPLSVQRRFPE--LENRHVDFLKRDIIKAMNKA 162 L +P + + L+ I++A+ + Sbjct: 112 RLITLPDKLAPLVHDAANPAAVRVLLRSAIVEALAEL 148 >UniRef50_C9MV79 Transcriptional regulator, MerR family n=2 Tax=Fusobacteriaceae RepID=C9MV79_9FUSO Length = 189 Score = 64.1 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 63/166 (37%), Gaps = 21/166 (12%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRRE 65 +LA + G + R ++N +G +++ KG + + +R Y E + + Sbjct: 12 TELAKLLGITDRHLRNLANEG--IIKKTEKGKYLFF---ESVRGYIEYIETKNEANVDLK 66 Query: 66 VEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125 E++R E + + + ++LK ++ + V++ + Sbjct: 67 DEKIR--------------EEIKKIKKDTELKDLKIKELKNQLHPASIIEKVMTDSLMNL 112 Query: 126 ASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELI 169 L + + + L+N + ++ I++A+ + + + + Sbjct: 113 KGRLLSLSNRLAPQLIALDNLGEIQEVIQDSILEALEELSEYNPEL 158 >UniRef50_B2V2A8 Putative uncharacterized protein n=1 Tax=Clostridium botulinum E3 str. Alaska E43 RepID=B2V2A8_CLOBA Length = 197 Score = 64.1 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 62/169 (36%), Gaps = 17/169 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 V+ LA++FG + R I+ + +G+ GK Y I+ Y Sbjct: 15 TVSSTVLANLFGLTTRRIRQLENEGVIKKIARGK-----YSLQDNIKSYI---------- 59 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + + S+T+ + E L R + + EL+ A + + V++ + Sbjct: 60 TFIKTSTDLKESKTEEGKIDYDEEHALLERRKREKIELELASMRGTMHFSEDVERVMNDM 119 Query: 122 AGEIASILDGIPLSVQRRFPELE--NRHVDFLKRDIIKAMNKAAALDEL 168 + + +P V R + + L+ +++ +N+ + + Sbjct: 120 LSNFRAKILALPSRVSPRLMGINTIADIQETLQSEVLDVLNELSKYNPN 168 >UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Escherichia coli SE11 RepID=B6I861_ECOSE Length = 188 Score = 62.6 bits (150), Expect = 7e-09, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 73/183 (39%), Gaps = 14/183 (7%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 ++ ++A S R +++ + G PV +G G ++ A +Y + + Sbjct: 3 SQAEVAAHLLLSDRRLRDLAKLPGAPVPQGRG-----DWELDAWRHFYIHYLRSNRRDTV 57 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E+ S + ++ E + + +K + + +SR+A Sbjct: 58 GTDEPEVGDNSPEKNREQWLKNEER---QERILMARVKRRILAKRYAPIELISVAVSRVA 114 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAAL-----DELIPGLLSEYN 177 E+ + ++ P +++ +PE+ L+ ++ A+N+ A + D + + + + Sbjct: 115 VELRTRVESWPPRLKKVWPEMPQEASSVLREELAIALNELADIRVDFSDYDVSDIERDLD 174 Query: 178 RAD 180 R + Sbjct: 175 RVE 177 >UniRef50_C7H6G3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C7H6G3_9FIRM Length = 192 Score = 61.1 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 59/167 (35%), Gaps = 12/167 (7%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 N +A +FG + R IQ + G+ ++D ++ Y ++ N + Sbjct: 10 NAAIIAKLFGVTDRRIQQLAKDGIIPAAQ---KRPYMFDLLPTVQSYIRYLSDKANGREA 66 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + + + + R++AD ++ ++ + V + + Sbjct: 67 KSADTAQV-------EMEKLRAEADMKRSKADMAAMQLKELEGKMHRSEDVEAVTNDLVY 119 Query: 124 EIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALDEL 168 + S++ +P + ++ N ++ + K +N+ A + Sbjct: 120 TVRSMIMALPGRLAMDVVQVASANEASALIRAECYKILNELANYNYD 166 >UniRef50_A0L5S8 Transcriptional regulator, Fis family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5S8_MAGSM Length = 292 Score = 60.3 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 20/170 (11%), Positives = 46/170 (27%), Gaps = 23/170 (13%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 + +A S R +++ ++ R D V Y + + Sbjct: 138 TQADIAAHLDLSERRVRDLLKELGLPARNP--------DLDQVRTAYLRHLRAVASR--- 186 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + ER +L AQ + E++ R E++ +A Sbjct: 187 ----------HKSKGGLDLTTERAKLAAAQREKTEIEVTRLRGELIPADEVKQAAFALAR 236 Query: 124 EIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALDELIPG 171 + L +P + ++ + +A+ + A Sbjct: 237 RVRDRLMLVPHRLAVTLAADPNPAAMEQKMEESLREALEELADRAHDDRQ 286 >UniRef50_B0PEX8 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEX8_9FIRM Length = 190 Score = 60.3 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 13/163 (7%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVE 67 +A++FG + R +Q + G+ YD V++ Y +E + R Sbjct: 15 VANLFGVTTRRVQQLVKDGIITATKEK--GVNKYDLHVVVKQYIRHLSEKVQGRESRHNS 72 Query: 68 ELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 EL R+ ++A EL+ ++ + + + + I Sbjct: 73 EL---------DNQKLGAEIRIKESKARLAELQLQELEGKMHRSEDVEDMTTDLVFTIRG 123 Query: 128 ILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDEL 168 +L +P + L++ + ++ ++ + + A Sbjct: 124 MLVALPGRLAVDLAGLDSPLEISERIRLEVNSILQQLANYRYD 166 >UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francisella RepID=A0Q4V8_FRATN Length = 174 Score = 59.1 bits (141), Expect = 7e-08, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 22/182 (12%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 V+ L++ R IQ Q + K + Y + Y + K Sbjct: 8 VSSGVLSEYLSIGERRIQQLTSQDIL-----KKTGKNQYPLKENVNRYIAYLQDRAGGKS 62 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +E+ + ++ RLT+ QAD Q++K +VV L+ + Sbjct: 63 EQEL------------NIEFKKQKLRLTKFQADEQQVKAELAQKKVVAVNDVISSLADLF 110 Query: 123 GEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDELIPGLLSEYNRAD 180 + L IP + ++ + L +I +A+ + + +++ +A+ Sbjct: 111 ALMREKLLNIPERAEYEIFGETDKDIFNQKLSTEIKEALFEIC---DNYTKTVNKVIQAE 167 Query: 181 RQ 182 Sbjct: 168 NI 169 >UniRef50_C2BG35 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BG35_9FIRM Length = 173 Score = 58.7 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 55/164 (33%), Gaps = 23/164 (14%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 + + +A + S R ++ +++G+ G LY Y + Sbjct: 8 STQAIAKLLNISERRVRQLRDEGIIEETMPG-----LYKLLETNHAYIDYLKGNSKI--- 59 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + ER +L +A+ +EL ++ ET+ V++ + Sbjct: 60 -------------EENLNYYEERAKLVKAKRQNEELDLKIRQRDLHETSEIEEVMADMLT 106 Query: 124 EIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAAL 165 L IP + L+++ L+ + + +N+ + Sbjct: 107 NFKVRLMAIPAKLSPVLAGLKDKTKIYKILQEAVEEGLNELSDF 150 >UniRef50_Q0BEI9 Putative uncharacterized protein n=11 Tax=Burkholderia RepID=Q0BEI9_BURCM Length = 221 Score = 58.0 bits (138), Expect = 2e-07, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 23/171 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + ++Q+AD T+ ++ R + Y E + Sbjct: 34 LTQQQIADHLDLERSTVSRLVDRLNIDYRTAS--------LDEIRVAYLRHLRESAAGR- 84 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + ER R + + L A ++V A ++ Sbjct: 85 ------------ASETGIDLVAERAMTERVDREIKLLTLAEKKGQLVNAAQLEQAYGQMV 132 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDF--LKRDIIKAMNKAAALDELIPG 171 G + L +P + + L VD L + + + + D PG Sbjct: 133 GAFQTELLALPDKLVQELRTLYGVEVDVEWLNEHMYGCLQQLSEYDADSPG 183 >UniRef50_A7MG09 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MG09_ENTS8 Length = 181 Score = 54.5 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 6/130 (4%) Query: 39 VLYDSAAVIRWYAERDAEIENEKLRR----EVEELRQASETDLQPGTIEYERHRLTRAQA 94 YD A V R + R +I + L + E+ RL +A+A Sbjct: 10 YGYDPATVSRDWKARGLDISQTDEEIYQWVQDNVLTPLRGQTDLKEETQREQLRLAKAKA 69 Query: 95 DAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELEN--RHVDFLK 152 D +E+ + ++E + T LS ++ ++L IP + E+ + + LK Sbjct: 70 DIEEMNADQLRRNLIEVDYVTESLSSYLLQLKNMLRSIPNTTYVELFSSEDANQLRETLK 129 Query: 153 RDIIKAMNKA 162 I + + Sbjct: 130 DKIDEVLRDI 139 >UniRef50_Q73IA8 Putative uncharacterized protein n=7 Tax=root RepID=Q73IA8_WOLPM Length = 163 Score = 53.7 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 11/163 (6%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 ++ + + A G S + + ++G+ L G E ++ A IR ++ E Sbjct: 5 KITQTEWARELGVSKQYVCYLVKKGIVELEDGLIDREQANEAVAAIRDPSQPLRRKNPEG 64 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 +L +E R +A+A+ E++ + Sbjct: 65 EEVGNNKLSMMLLKTRIKNEMERGRLLEAKAKAEI---------GELISVEEVKTEAFNV 115 Query: 122 AGEIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKA 162 A + + L IP V + + + L +I A+ + Sbjct: 116 ARVVRNNLLNIPDRVSALLASINDTEKIHETLTEEIRTALEEL 158 >UniRef50_B6IMM8 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IMM8_RHOCS Length = 162 Score = 53.0 bits (125), Expect = 6e-06, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 19/163 (11%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 ++++ + R+I+ ++G+ G D A Y E+ + Sbjct: 3 TQQEVGKHLDLTDRSIRELLDKGVLPNARRG-----ALDLDACRLAYIRHLREVAAGRAL 57 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + ER RL R QAD L+NA +++ A T ++ Sbjct: 58 ------------GPGGDDLTAERARLAREQADHYALRNAALRLDLLPRADITRAVTAAFQ 105 Query: 124 EIASILDGIPLSVQRRFPELE--NRHVDFLKRDIIKAMNKAAA 164 + +P + L L + + + A Sbjct: 106 IVRDRFTALPARLSGPLARLTDPAEVRRRLDDAVQAVLVELAE 148 >UniRef50_A8GLM5 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GLM5_SERP5 Length = 181 Score = 51.8 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 17/174 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 ++K + A G S + G ++ G ++ YD A ++ + Sbjct: 1 MSKAEFARRVGLSRPAVTKLCSSGRIPVKANG---QLDYDIALAAYKRTQQVGREVSADN 57 Query: 63 RREVEELRQASETDLQPGT-------------IEYERHRLTRAQADAQELKNARDSAEVV 109 + D + QA ++L+ + +V Sbjct: 58 GKIKASPAAPPPQDFPDSDDSPVAGNSRMIQQFNKAKTIEKTFQAKLRQLEYEEKNKTLV 117 Query: 110 ETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVD-FLKRDIIKAMNKA 162 + A E+ L IP R ++ ++ ++ +A + Sbjct: 118 PRTEVEDDAAVAASELRGRLFSIPARAAVVCEGKTAREIERIIETELNQAFEEL 171 >UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax=Rhizobium etli Kim 5 RepID=UPI000190538F Length = 126 Score = 50.7 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 11/133 (8%) Query: 38 EVLYDSAAVIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQ 97 D V+RW +R EI E+ + + + + R AQA Sbjct: 1 SWELDLGDVVRWLEDRAGEIAAERFGAS----------EDGKTSEDEAKRRRAVAQAVVA 50 Query: 98 ELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRF-PELENRHVDFLKRDII 156 EL V+ A + S I L IP + P + + ++ I Sbjct: 51 ELDMLERLRSVIPIADVLDLWSTDYAAIRDKLMSIPDLIAANVDPAIASHVSGIAEKHIR 110 Query: 157 KAMNKAAALDELI 169 + K +L+ Sbjct: 111 NVLAKLKTEGKLL 123 >UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J9F0_AGRRK Length = 214 Score = 50.7 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 53/161 (32%), Gaps = 17/161 (10%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 K L+ + S+RT+++ + V LY + + + +++ Sbjct: 55 TKADLSVLMNVSMRTLRDLDSREKLV----RAPKSGLYMTVPTLNACWAHIRLVAAGRVK 110 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 ER + + +E+ +EV+ S A Sbjct: 111 EAESPHA-------------TERLKSATVERQIREIALKNLKSEVLTLEEIDGAWSTFAS 157 Query: 124 EIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164 ++ +++ +P V+ R P + + L+ + + AA Sbjct: 158 QLKAVMLAVPGKVRSRIPHITAHDQETLRTIVKDMLVDLAA 198 >UniRef50_B0P604 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P604_9FIRM Length = 188 Score = 49.9 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 64/182 (35%), Gaps = 20/182 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 EV+ +LA I G + R ++ E G+ G+ + A ++ Y + A+ + Sbjct: 13 EVSTTELACILGITGRYVRQMAEDGVLSKVDKGR-----FLLAESVQKYIKYTAKDAMNE 67 Query: 62 LRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++++ ++ L ++A +L+ ++ + S + Sbjct: 68 EDIKLDKAKR------------TAEVTLKASKAQVAKLEAEEMKGKMHRAEDVEAMTSDL 115 Query: 122 AGEIASILDGIPLSVQRRFP--ELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRA 179 I L +P + E + +++++ K M + A P E R Sbjct: 116 VYAIRGALIALPGRLAVDVAAVESPAEASEIIRKEVYKVMRELANYRYD-PQKYEELVRE 174 Query: 180 DR 181 R Sbjct: 175 RR 176 >UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSD8_OPITP Length = 233 Score = 49.9 bits (117), Expect = 5e-05, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 1 MEVNKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M +N QLA+ FG + +++W +G+P +R G+ +++D A V+ W AER + Sbjct: 1 MYLNVIQLAESFGVAESVVESWIRDEGLPCVRDSGR---LMFDRAQVVAWAAERGLVAKA 57 Query: 60 EKLRREVEELRQASETDLQ 78 L + AS + Sbjct: 58 GFLADQPAAAGPASRLESW 76 >UniRef50_D1Y312 Putative uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y312_9BACT Length = 164 Score = 49.5 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 18/176 (10%) Query: 14 ASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQAS 73 + R ++ +QG+ G+ Y + Y +E ++ Sbjct: 1 MTDRRVRQLAQQGILPRDEKGR-----YPMRDCVLAYIAYLKSNPDE-----------SA 44 Query: 74 ETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133 +A+AD +L E++ A E+ + + G+P Sbjct: 45 SVKELEYRKLKAETEERQAKADKAQLDLDERRGELISRADMYREWIGRCVELRAAMLGLP 104 Query: 134 LSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDELIPGLLSEYNRADRQYAGGS 187 + RF + R + + + + + + P S A R GS Sbjct: 105 NELGFRFTADDTRALVEEVSEEFVRTTLETWSREGPFTPRAPSAALDAARTEGAGS 160 >UniRef50_B8L8I9 Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8I9_9GAMM Length = 167 Score = 48.7 bits (114), Expect = 9e-05, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 57/176 (32%), Gaps = 24/176 (13%) Query: 4 NKKQLADIFGASIRTIQN-WQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + +LAD FG RT +E G+P L + +Y A A + Sbjct: 12 SVARLADEFGMDRRTASKRLKEAGVPPLTK--RAGHDVYRLADAAPALVNPGAAAFGAEG 69 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + +L R Q++ + LK ++V A + + Sbjct: 70 VVDPRDLPPME--------------RRAYYQSENERLKVESTIGQLVPAAEVEADYAELV 115 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNR 178 ++ D +P ++R+ L V ++ + + + G+ + R Sbjct: 116 KKVVQFFDTLPDVLERKAG-LTPEQVVKVQDECDRVR------QSMYEGITDDDVR 164 >UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteurellaceae RepID=B8F4L1_HAEPS Length = 170 Score = 48.0 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 24/163 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 +++N Q+A++ G +T+ P L G LY +I Sbjct: 22 LKLNINQIAEVTGLHRQTVSQRVAGLTPSL--GSNSKLKLYSLRDLI------------- 66 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 L +E R QA+ + LK R++ E++ + +S Sbjct: 67 --------LTGLTEKMSADVDSLSPNDRRAFWQAENERLKYERETRELIPAFEVSQEMSI 118 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +A + L+ +P ++R L+ + + +++ I ++ A Sbjct: 119 LAKAVVQTLETLPDILERDCG-LQPKDLIRVQQVIDDIRDQMA 160 >UniRef50_A5Z445 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z445_9FIRM Length = 149 Score = 48.0 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 22/169 (13%) Query: 14 ASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQAS 73 + + ++ ++G+ + G LY A R Y + + E Sbjct: 1 MTPKNVERLTQKGILQTKQG-----NLYALAETNRAYIKYLRDRNPESQEA--------- 46 Query: 74 ETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133 + ER +LT+ + +EL A E+ + V++ + S L IP Sbjct: 47 ------VDLNEERAKLTKTKRLNEELDLAVKKGELHRSEDIEKVMTAMLINFKSRLSAIP 100 Query: 134 LSVQRRFPELENRHVDF--LKRDIIKAMNKAAALDELIPGLLSEYNRAD 180 + + ++ F L I +A+N+ + + + + + D Sbjct: 101 AEEADKLAAMTDKAKIFLYLNDKIKEALNELSDFEGMFKEEIKDEEGND 149 >UniRef50_B0U9E3 Putative uncharacterized protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0U9E3_METS4 Length = 115 Score = 46.8 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 75 TDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPL 134 + ER RLT A+AD L+ A+ E+V G + S L +P Sbjct: 2 DEPAADDYVTERARLTAARADLAGLELAQLRGELVPADDIEATWGAAVGAMRSRLLALPA 61 Query: 135 SVQRRFPEL--ENRHVDFLKRDIIKAMNKA 162 R + ++ ++I + + Sbjct: 62 KTAPRVVTMRTAAEVATLIRGELIDILIEL 91 >UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9W3_GEMAT Length = 169 Score = 46.0 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 19/135 (14%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMP-VLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 ++ Q+A I G + TI+ ++G P V G +G + D+ + W+ ER+ E Sbjct: 6 TFSQTQMAAILGVTSPTIRAAIDEGAPGVHAQGSRGTKGKIDATQFVPWWIERERSRARE 65 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 K + Q+ + IE +R +L + + +A A L Sbjct: 66 K------DKGQSQAAIERELDIEMKREKLLKEKREAL------------PRAVMVNTLRD 107 Query: 121 IAGEIASILDGIPLS 135 +A + + +P Sbjct: 108 VATRLNVTITQMPDR 122 >UniRef50_C7G5Z1 Putative uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5Z1_9FIRM Length = 196 Score = 46.0 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 53/169 (31%), Gaps = 13/169 (7%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRRE 65 ++A++F + R IQ + G+ G Y+ + Y + + K + Sbjct: 19 TKMAELFELTARRIQQLTQDGVLKTHDTPAGR--RYNVGEATKDYIKYLRTQLDRKASAQ 76 Query: 66 VEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125 ++L + A+A EL+ A + + + + I Sbjct: 77 NDKLET---------DKLQAEVDIKSAKARVAELQLAELEGTMHRAEDVEAITTDLVFNI 127 Query: 126 ASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALDELIPGL 172 S+L +P + EL ++ ++ + + + Sbjct: 128 RSMLMAMPGRLAVDTAELASPAETSARIQEEVNEILLSLSQYHYDPEEY 176 >UniRef50_B2UKQ5 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKQ5_AKKM8 Length = 167 Score = 45.6 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 17/158 (10%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +++ +LA G + TI ++G+ + A IR E + Sbjct: 4 ISQAELARQLGVNKSTITYHVKRGL---------------THAQIRELIEARRKENPIAE 48 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTR--AQADAQELKNARDSAEVVETAFCTFVLSR 120 E + A E + +T QA+ +K +D A +V+ ++ Sbjct: 49 PASPEIGKNAPEEGVAELRKRKLAAEITYKNLQAEQARVKLEKDKARLVDMEDVNELVVH 108 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKA 158 +A +L + + L + + R+ IKA Sbjct: 109 LASITKGVLQAFENKLPGKMEGLTAAEMVPMLREEIKA 146 >UniRef50_B4CXQ2 Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXQ2_9BACT Length = 197 Score = 45.3 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 27/157 (17%) Query: 7 QLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRRE 65 +LA+ + +TI W++ + P G L+D A + +R + E + Sbjct: 58 ELAETLKVTRQTINGWKKFEDAPKPESNG-----LHDVAKWKEFMRQRGLKGGEETPDIQ 112 Query: 66 VEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125 R R A+ + +EL+ A E + + + G+ Sbjct: 113 QAL-----------------RARKLLAEVEERELRLAVKRGEFISVEQVRGDWTNLVGQA 155 Query: 126 ASILDGIPLSVQRRFPE-LENRHVDFLKRDIIKAMNK 161 ++L + P L ++ + KA+++ Sbjct: 156 TALLRR---KFENELPPILSGLDATGIQEECRKAIDE 189 >UniRef50_Q830E1 Conserved domain protein n=7 Tax=Enterococcus faecalis RepID=Q830E1_ENTFA Length = 89 Score = 45.3 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDA 55 +N+ ++A F S TI+ W++ G+P +G YD RW + Sbjct: 39 LNQTEIAKYFNVSTTTIREWEKLGLPHGSVSKQGK--FYDKEGCRRWLLSQKR 89 >UniRef50_Q2W853 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=Q2W853_MAGSA Length = 211 Score = 44.9 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 59/181 (32%), Gaps = 11/181 (6%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M ++ ++ A G S ++ + G G + V D+A + R A + Sbjct: 31 MGLSVREYARRRGVSHTAVRKAVQTGRIPQEPDGTIDPVKADAAWDAQTDPGRKATTAPK 90 Query: 61 KLRREVEELRQASETDLQPGT-------IEYERHRLTRAQADAQELKNARDSAEVVETAF 113 + + + P R A+A ++ R EVV+ A Sbjct: 91 PVIEAPIAPAPKPQRETTPAVPAAAGATFAQARTAHEVAKAQKARIQVDRLKDEVVDRAR 150 Query: 114 CTFVLSRIAGEIASILDGIPLSVQRRFPE----LENRHVDFLKRDIIKAMNKAAALDELI 169 T ++ ++A + P V + + L+ + +++ AA++ Sbjct: 151 ATALVFKLARQERDAWITWPARVAGQMAAEIGIDPHVMQTLLEAHVHAHLDELAAIEPNF 210 Query: 170 P 170 Sbjct: 211 R 211 >UniRef50_Q2SAJ6 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q2SAJ6_HAHCH Length = 170 Score = 44.9 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 50/175 (28%), Gaps = 9/175 (5%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M ++ + A G S ++ + G G D R + + Sbjct: 1 MGISIRAYARHRGVSDTAVRKAIQTGRITPEQDG-----TLDQERADREWERNTESPKVG 55 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 R V+ ++ R +A +++ AR E+V+ + + + Sbjct: 56 SRRGVVKARTPEDIAGNGNASLLQARTVNEVVKAQTNKVRLARLKGELVDRSQAIAHVFQ 115 Query: 121 IAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171 +A P V + L+ + + + + L + G Sbjct: 116 LARTERDAWLNWPSRVSPHMAAHLGVDPHAFHVALESAVREHLQELGELRPRVDG 170 >UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=B7LNB9_ESCF3 Length = 172 Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 21/163 (12%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 + +N QLA + +T+ + P G LY ++R R Sbjct: 12 LRLNINQLAALTNLHRQTVASRLSNVEPAP--GSNSRLKLYSVLDILRELLGRTTTP--- 66 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 +L R Q++ + LK +++ E++ + + + Sbjct: 67 ---------------ELVAVDKMTPPDRKAWFQSERERLKFQQETGELIPASEVSREFAS 111 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +A + +L+ +P ++R + V +++ I ++ A Sbjct: 112 MAKAVVQVLETLPDILERDC-AMTPSAVVRVQKVIDDLRDQIA 153 >UniRef50_A4U1Y8 BACTERIOPHAGE-RELATED PROTEIN n=2 Tax=Magnetospirillum RepID=A4U1Y8_9PROT Length = 170 Score = 44.1 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 37/165 (22%), Gaps = 17/165 (10%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 K + A G + I G+PV G AE A +E Sbjct: 9 TKTEFAARVGLTKGRISQLVADGLPVQPDGTI-------------AIAEGLAWMEANLDP 55 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + + ++ R Q L ++ +V++ + A Sbjct: 56 ARRNKGGPPAPVATGTLSLAEARRMYMVVQVQRARLAYDKERGQVIDAKEAAAAVFSRAK 115 Query: 124 EIASILDGIPLSVQRRFPELENRHVD----FLKRDIIKAMNKAAA 164 L R + + + + Sbjct: 116 AERDSHMAWVSRTAPLLAAETGADPQATFAALDRFMREHLEHLSD 160 >UniRef50_B3H0X8 Putative uncharacterized protein n=4 Tax=Pasteurellaceae RepID=B3H0X8_ACTP7 Length = 159 Score = 44.1 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 54/163 (33%), Gaps = 24/163 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 +++N Q+A++ G +T+ P + K + Sbjct: 7 LKLNINQIAEVTGLHRQTVSQRVAGLTPAMGSNSK-----------------------LK 43 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 L SE R QA+ + LK + E++ + + Sbjct: 44 LYLLRDLLLAGLSEKMSADVDSLSPNDRRAFWQAENERLKYEEKTGELIPASEVALEMGA 103 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +A + L+ +P ++R L+ + + +++ I ++ A Sbjct: 104 MAKAVVQTLETLPDILERDCG-LQPKDLIRVQQVIDDVRDQMA 145 >UniRef50_C0A450 Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A450_9BACT Length = 236 Score = 43.7 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 44/150 (29%), Gaps = 22/150 (14%) Query: 4 NKKQLADIFGASIRTIQNWQ---EQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 +K +LA+ G + +TI W G P G+ + RW E Sbjct: 61 SKVELANALGVTRQTIDRWGKLKRNGPPHPASNGR-----WSIPDWKRWMKETGR----- 110 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + D + + + E+ NA E++ + Sbjct: 111 ---------GGGVDGDSLEDELPRLNAKRILLINERLEIDNAERRGELISREDVVREAAE 161 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDF 150 IA + S L G S+ ++ + Sbjct: 162 IATRLRSDLYGQAASICEEVMKMTDTDKAV 191 >UniRef50_B2JD13 Putative uncharacterized protein n=2 Tax=Burkholderia RepID=B2JD13_BURP8 Length = 197 Score = 43.7 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 50/187 (26%), Gaps = 25/187 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLR------GGGKGNEVLYDSAAVIR-------- 48 +N+ + A + G S +T+ W+E+G V N Y Sbjct: 1 MNQSEFAALHGVSRKTVTKWKERGWLVFAGDAIDVKASNANLTRYRRDGAPAVTQSAKQT 60 Query: 49 ---WYAERDAEIENEKLRREVEELRQASETDLQP----GTIEYERHRLTRAQADAQELKN 101 + + E + + L + + R +L+ Sbjct: 61 AKGNKRQSVTLAAKGVTLEDGESASEVAGRILSGNVELLSFDEARCLKENYLGLMAQLEY 120 Query: 102 ARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIK 157 R S +VE T +L P V +R V+ L + K Sbjct: 121 ERKSGSLVELDTATAILFEEFRAQRDAWLNWPTRVGPILAADLGVEADRVVETLTAHVHK 180 Query: 158 AMNKAAA 164 + + Sbjct: 181 HIAQLGE 187 >UniRef50_C1CPH0 Transcriptional regulator, AlpA family n=4 Tax=Streptococcus RepID=C1CPH0_STRZT Length = 89 Score = 43.7 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERD 54 +NK Q G S T+ W ++G+PV++ G V ++ + +W + Sbjct: 38 YLNKGQTCKYLGISNNTLDGWIQKGLPVIK---IGKTVRFNKNEIDKWLCRKA 87 >UniRef50_C0PVV4 Gifsy-2 prophage protein n=12 Tax=Salmonella enterica RepID=C0PVV4_SALPC Length = 198 Score = 43.7 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 58/169 (34%), Gaps = 23/169 (13%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVL-YDSAAVIRWYAERDAEIEN 59 +E+N QL+ I GA +TI + + V GG G+ + Y ++ A Sbjct: 29 LELNITQLSAITGAHRQTIASRLKG---VKTSGGNGSNLKIYRLVDILTAMMTMPAVTGE 85 Query: 60 EKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 R Q++ ++ ++ ++ + V + Sbjct: 86 NDP------------------NKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYA 127 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDEL 168 +A + L+ +P ++R L ++ ++ I + A++ Sbjct: 128 VMAKTVVKTLEILPDLLERDA-ALPPDALEMTQKIIDQLREDLASMTYQ 175 >UniRef50_A3LLS2 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3LLS2_PSEAE Length = 191 Score = 43.3 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 55/174 (31%), Gaps = 12/174 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGK--------GNEVLYDSAAVIRWYAERD 54 + + + A G S + + QG VL GGK D + + Sbjct: 4 LTQSEFAARRGWSRAYVSKLKSQGRLVLGEGGKIDVEATEQQLAESSDPSKAGVAERHQR 63 Query: 55 AEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQ--ADAQELKNARDSAEVVETA 112 + + G++ +++ R R A E + + E+VE Sbjct: 64 DRADKGVHAHVTPTATASLPAPSGGGSLNFQKARAHREHYLALLAEDEFRKGRGELVERE 123 Query: 113 FCTFVLSRIAGEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAA 164 +A + +L G+P V + + L I A+ +AA+ Sbjct: 124 VVDCAAFDVARSLRDLLMGLPTKVAGELVAITDPWEMEQRLTSLIRVALEEAAS 177 >UniRef50_Q89JP3 Bll5240 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89JP3_BRAJA Length = 202 Score = 43.3 bits (100), Expect = 0.005, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 48/162 (29%), Gaps = 19/162 (11%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLR 63 Q A S ++ +G+ + GK YD V R + + Sbjct: 25 TIAQAAAHICCSRSQFDSYLAEGVITRQPSGK-----YDLDQVRREVLAHLRSVAAGRGG 79 Query: 64 REVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + ER RL A+ +E ++A ++ ++V+ L + Sbjct: 80 A-------------AGSRLTEERTRLVAAKRRREERQDAFEAGQLVQLESVCRCLEQSLV 126 Query: 124 EIASILDGIPLSVQRRFPELENRH-VDFLKRDIIKAMNKAAA 164 + + L +P + + A+ + A Sbjct: 127 GMRNRLLNLPGETAYLLAMRRQEECFKVVDDAVRAALEEIAD 168 >UniRef50_Q72A11 Putative uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=Q72A11_DESVH Length = 337 Score = 43.0 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 12/157 (7%) Query: 14 ASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQAS 73 S RT N+ G + D I A + + + E A Sbjct: 40 ISRRTFYNYV--GTRRDCRPRRDGLYHADDIVKIATAAGWPPRVSAGAVPQGGEGGATAK 97 Query: 74 ETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133 + L T+ +R R R + D +EL+ + E+V ++S + S L Sbjct: 98 DVGL---TLLEQRLRRERIRGDLEELELRKKRGELVSRGEMERMMSAGVAVLESELLNWI 154 Query: 134 LSVQRRF-------PELENRHVDFLKRDIIKAMNKAA 163 S P+ E +D L+ +N A Sbjct: 155 HSEALEIISLVDGNPKHEALLIDMLRERSRVFLNGFA 191 >UniRef50_C8TRT6 Predicted terminase small subunit n=10 Tax=root RepID=C8TRT6_ECO26 Length = 175 Score = 43.0 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Query: 73 SETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGI 132 + + + + R Q++ + +K ++ +++ V S + + +L+ I Sbjct: 66 AADSVHDPSRMEPKERKDWYQSENERIKLEKEQRKLIPVDEVVIVYSSMRKAVVQVLETI 125 Query: 133 PLSVQRRFPELENRHVDFLKRDIIKAM 159 P ++R L + V +++ I Sbjct: 126 PDVLERDC-ALTPQAVGVVQQAIDDLR 151 >UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2V9_9BACT Length = 267 Score = 42.6 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 1/97 (1%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRRE 65 +++ ++FG S RTI+ W EQG+ + N+ YD A+ ++ RD + +R+ Sbjct: 31 REIKELFGLSERTIRRWTEQGI-IQGTPALNNDFTYDFQALTQFRRVRDLRAQGHSIRQI 89 Query: 66 VEELRQASETDLQPGTIEYERHRLTRAQADAQELKNA 102 EL+ + R R +A + +N Sbjct: 90 EAELQGQLNLFRRVEENRIARLRTPFEEALVLDDQND 126 >UniRef50_Q48KF6 Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48KF6_PSE14 Length = 219 Score = 42.6 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 53/175 (30%), Gaps = 14/175 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWY-------AERDA 55 +++ A G S + + + G + G L D A ++ + Sbjct: 9 LSRTAYAKSKGWSRQYVGKLAQNGRLIETADG-----LVDVDATEQFLGITSDPSRRPAS 63 Query: 56 EIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCT 115 V E E+ + + RL AQA E + +VE A Sbjct: 64 TSAQPSPISHVIEPVNPPESPSMVVGYQQSKARLALAQARLAETTLLEANKSLVEVAVVD 123 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDEL 168 + ++ +P + + + +L + + ++ AA++ Sbjct: 124 AAAFAAGRMLRDLILSLPTQIAPELSGMSDPWEIEKYLVASLRRVLDDAASMTSK 178 >UniRef50_Q7P8F8 Putative uncharacterized protein FNV2232 n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P8F8_FUSNV Length = 200 Score = 42.6 bits (98), Expect = 0.008, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 18/183 (9%) Query: 4 NKKQLADIFGASIRTIQ------NWQEQGMPVLR-------GGGKGNEVLY--DSAAVIR 48 N+KQL+ I S R ++ + P+++ G+ L + A I Sbjct: 9 NEKQLSKILNISDRRVRELFKDYKLENGSFPLIKCVTEFINQTRNGDINLVTQKTLAEIL 68 Query: 49 WYAERDAEIENEKLRREVEELRQASETDLQPGTIEY--ERHRLTRAQADAQELKNARDSA 106 +E+ + + E Q D + ER++ + + Q+ K Sbjct: 69 GLSEKTVKELANRGVLEKNFNGQFDLKDNLKRYLTVNDERNKKKAVERELQQYKLEILQD 128 Query: 107 EVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHV-DFLKRDIIKAMNKAAAL 165 + +VL+ I + + L + + E+ D+LK +I + + A Sbjct: 129 KYHLDEDVKYVLTDILIKFKARLQATAVKIDNEISEISEADRLDYLKNTLINCLEELANY 188 Query: 166 DEL 168 + Sbjct: 189 EPP 191 >UniRef50_Q253V9 Phosphotransferase system mannitol/fructose-specific Pts IIA n=13 Tax=Chlamydiaceae RepID=Q253V9_CHLFF Length = 226 Score = 42.2 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M++ ++LA + S T++ W E+G E ++ + W + E Sbjct: 1 MDLKLEELASLLDVSENTVRRWLEEGAIPSYRMNN--EHRFNREEIEDWILNNQVLVGLE 58 Query: 61 KLRREVEELR 70 K ++ E+ R Sbjct: 59 KDEKKDEDFR 68 >UniRef50_D1AA53 N-6 DNA methylase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AA53_THECD Length = 698 Score = 42.2 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 3/99 (3%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMP-VLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 +V +++ I G + T+ NW+ + GG LYD AV W R Sbjct: 7 QVTAAEISRIAGVTRATVSNWRRRHADFPAPVGGTEASPLYDLDAVRAWLKARGHASAAN 66 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQEL 99 + LR + + RL A D EL Sbjct: 67 PIEELRTTLRAHGGDTARLLPLVLAAARL--ADGDLTEL 103 >UniRef50_C8NRQ9 Putative uncharacterized protein n=2 Tax=Corynebacterium efficiens RepID=C8NRQ9_COREF Length = 604 Score = 41.8 bits (96), Expect = 0.013, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 2/88 (2%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 ++ ++A + G S + W+++ GKG +L++ V+ W + I Sbjct: 7 KITTSEIAQLAGVSTAAVSQWRKRHPDTFPQALPGKGRAILFNRIDVLNWLKDNGRPIRE 66 Query: 60 EKLRREVEELRQASETDLQPGTIEYERH 87 + + R Sbjct: 67 VWSMADSIRGFVEASKYGPTLAFFAARA 94 >UniRef50_Q87B59 Phage-related protein n=7 Tax=Xylella fastidiosa RepID=Q87B59_XYLFT Length = 196 Score = 41.4 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 17/169 (10%), Positives = 51/169 (30%), Gaps = 4/169 (2%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + + A G S I+ + +G +L G+ + D+ + + Sbjct: 1 MTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTL--LDGMTHPVQGGKRGMT 58 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + Q ++ R A+A EL + + ++ + + Sbjct: 59 DPHAAAVPTFTVMTPQGIPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLV 118 Query: 123 GEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELI 169 + + L G+ +++ + + + D+ + + Sbjct: 119 RQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQMQDAATTL 167 >UniRef50_A0NRU5 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRU5_9RHOB Length = 163 Score = 41.4 bits (95), Expect = 0.015, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 5/122 (4%) Query: 53 RDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETA 112 + V + Q + + + + R A+A EL A+ E++ Sbjct: 39 KPTSRGKWPFAMSVRSILQHARKSREDSELSKAKAREINARARRHELSMAKAERELIPLE 98 Query: 113 FCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 + + S G+P + R + ++ +M + AA + + Sbjct: 99 DFEVAFDEVLAAMRSEFVGLPARLTR-----DRTERTRFNGEVHASMARIAAKLKDRADM 153 Query: 173 LS 174 L Sbjct: 154 LR 155 >UniRef50_C1YUG4 Predicted transcriptional regulator n=3 Tax=Actinomycetales RepID=C1YUG4_NOCDA Length = 293 Score = 41.4 bits (95), Expect = 0.015, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 25/93 (26%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + +LA G T+++W +G+ V G Y A + ++ Sbjct: 119 MGVSELAAALGVRPSTLRHWDAEGLVVPGRTSPGGTRRYSPADARDARIVHQLRMAGYRI 178 Query: 63 RREVEELRQASETDLQPGTIEYERHRLTRAQAD 95 + Q + R A Sbjct: 179 APLRALMPQLRRAHRWDEVMAALAARDASIDAR 211 >UniRef50_A6XRQ1 Putative uncharacterized protein n=1 Tax=Vibrio cholerae AM-19226 RepID=A6XRQ1_VIBCH Length = 171 Score = 41.4 bits (95), Expect = 0.016, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 13/148 (8%) Query: 32 GGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTR 91 GGGKG ++ +S I+W +R+ + + + T + GT + E LT Sbjct: 15 GGGKGKPLVIESEKAIQWIIDREVQKQIG--------QFEKERTAPKVGTKDGEDLLLTA 66 Query: 92 AQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRF--PELENRHVD 149 A+ E++ + V++ L + + LDGI + + Sbjct: 67 AKRRKAEVEAKKAEEAVMDLGEIAQFLYMVGNLFGNELDGIGARTALEVSSEHEPAKCKN 126 Query: 150 FLKRDIIKAMNKAAALDELIPGLLSEYN 177 + R+ + + A + + ++EY Sbjct: 127 IIDRESRRIRSATA---DRLSAFVAEYL 151 >UniRef50_Q6VY86 Putative uncharacterized protein n=1 Tax=Streptomyces phage VWB RepID=Q6VY86_9CAUD Length = 77 Score = 41.4 bits (95), Expect = 0.017, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYA 51 + QL +G S T+ W ++G PV +G +D V W + Sbjct: 22 LTTAQLMARYGVSNWTVNKWVQEGCPVEPTAFRGR--RFDPDRVAAWMS 68 >UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383339 Length = 110 Score = 41.4 bits (95), Expect = 0.017, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 1/80 (1%) Query: 3 VNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 V+ +LA + G TI +W ++ G+PV+RGG G E D A + W + + Sbjct: 27 VSITELAALTGYHRDTISDWVKRWGLPVVRGGAHGIEYQIDVRAFVDWPEAQAKAEALKN 86 Query: 62 LRREVEELRQASETDLQPGT 81 P Sbjct: 87 APAAASGGFAGWLGITDPAK 106 >UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B657_METEA Length = 105 Score = 40.6 bits (93), Expect = 0.026, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVL-RGGGKGNEVLYDSAAVIRWYAER 53 + ++AD+ G S T+ W GMP G L D +RW R Sbjct: 36 SASKVADLLGVSRATVAKWIRDGMPTEGSEPAPGKPYLIDIGIAVRWLQGR 86 >UniRef50_Q53574 Putative uncharacterized protein orf G n=1 Tax=Synechococcus elongatus PCC 7942 RepID=Q53574_SYNE7 Length = 171 Score = 40.6 bits (93), Expect = 0.027, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 47/165 (28%), Gaps = 14/165 (8%) Query: 7 QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREV 66 + A G + + I G + G+ D A A R+ + R Sbjct: 9 EFARANGVAPQAIHQAIAAGR-ITSVWKVGSRWHVDPVA-----AAREWAANTDPSRIRN 62 Query: 67 EELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 + + + R +A+ L +V+ + + + Sbjct: 63 DGGGRGKRREPPSAEQLEARRLKAHYRAELLRLDVEERERSLVDAEDIASTWAAESKRVI 122 Query: 127 SILDGIPLSVQRRF----PELENRHVDFL----KRDIIKAMNKAA 163 +P + R EL + + +RD+ +A+ + Sbjct: 123 DRFATVPAACVRSIEAVTGELPPEKREAIAALLQRDVSQALEPLS 167 >UniRef50_A0L9B4 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=A0L9B4_MAGSM Length = 187 Score = 40.6 bits (93), Expect = 0.027, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 22/186 (11%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M V+ +Q A + G S ++ + G G + D+A + EI Sbjct: 1 MGVSIRQYAKLRGVSDAAVRKAIKAGRISKEPDGTVDPAKADAAWERNTNPAQQREISAN 60 Query: 61 KLRREVEELRQASETDLQP--------------------GTIEYERHRLTRAQADAQELK 100 + R A +L Sbjct: 61 GGANPSANQAANPGYAPPANQPQRFASQTPPSPPLKQGAPDYQTSRAIREAYSARLVKLD 120 Query: 101 NARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKA 158 S ++V + +A + L IP + + V + L +++ KA Sbjct: 121 FEERSEQLVSSDEVKVSAFNLARRVRDRLFTIPHRLSSVLASENDAGVIEERLDQELRKA 180 Query: 159 MNKAAA 164 + + Sbjct: 181 LEELKH 186 >UniRef50_B4W6T3 Putative uncharacterized protein n=2 Tax=Brevundimonas RepID=B4W6T3_9CAUL Length = 208 Score = 40.6 bits (93), Expect = 0.028, Method: Composition-based stats. Identities = 20/167 (11%), Positives = 43/167 (25%), Gaps = 10/167 (5%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + K A + NW ++G+ V + + Sbjct: 1 MKKGDFAKRQKVGASAVSNWAKKGLLVFAADPNQPGKQLVDVEKSELLIRGTIDPTRGRP 60 Query: 63 RREVEELRQASETDLQPG---------TIEYERHRLTRAQADAQELKNARDSAEVVETAF 113 R + + D G +E R R + + ++N + +V Sbjct: 61 RAQDAQASGQPTDDQPQGSVPSPIALNGLEAARLDEMRERTTRRRIENEQLLGRLVPLPE 120 Query: 114 CTFVLSRIAGEIASILDGIPLSVQRRF-PELENRHVDFLKRDIIKAM 159 + + G+ + R E + R V + D + Sbjct: 121 YERRAGDLGRLVRERTLGLVRQLSERLAAETDPRTVAAILNDAFDKL 167 >UniRef50_C4S5Y0 DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) n=3 Tax=Enterobacteriaceae RepID=C4S5Y0_YERBE Length = 203 Score = 39.9 bits (91), Expect = 0.046, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 53/193 (27%), Gaps = 32/193 (16%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 +N+ A + S +T+ W+ +G VL G E + R R + Sbjct: 1 MNQSDFAKLHNVSRKTVTAWKARGWLVLAGDDIDVEASNANIERFRKTVTRPEKKVAGNT 60 Query: 63 RREVEELRQASET-------------------------DLQPGTIEYERHRLTRAQ--AD 95 + + + + + R + A Sbjct: 61 QGNKAGNKTGNRAKGNRSGNRPDKDPVDSPADVVKKMIAESGVEMTIDEAREMKENFLAL 120 Query: 96 AQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPEL-----ENRHVDF 150 L+ S +V+ + + + L I R L + V+ Sbjct: 121 LTRLEYDIKSGQVLPYKEMIEAVGSEYSRMRTRLIAIAPEHGPRLRVLASTTNDAEFVEA 180 Query: 151 LKRDIIKAMNKAA 163 L+ + +AM + + Sbjct: 181 LQEVVYEAMEELS 193 >UniRef50_B2UKR7 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKR7_AKKM8 Length = 70 Score = 39.5 bits (90), Expect = 0.052, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 5/62 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPV-----LRGGGKGNEVLYDSAAVIRWYAERDAEI 57 + +LA T+ W GMP + +G YD V W ER + Sbjct: 7 LTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLEERSKKR 66 Query: 58 EN 59 + Sbjct: 67 TS 68 >UniRef50_Q72FM0 Putative uncharacterized protein n=3 Tax=Desulfovibrio vulgaris RepID=Q72FM0_DESVH Length = 243 Score = 39.5 bits (90), Expect = 0.056, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 7/122 (5%) Query: 50 YAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVV 109 Y +RD + L ++ +E QA A+ KN + + + Sbjct: 100 YRKRDVDRYAASLPTHALPEKETAEAQEYASRKAKAEAEKLEEQAKAERFKNEVRAGKYI 159 Query: 110 ETAFCTFVLSRIAGEIASILDGIPLSVQRRF-------PELENRHVDFLKRDIIKAMNKA 162 L+ AG +A+ L + + P+ + F +R + A+N+ Sbjct: 160 LRDDVEVELAARAGVLATGLRTMFETSLLDLIHTAEGNPKKAPDLLSFFERQLDAALNEY 219 Query: 163 AA 164 A Sbjct: 220 AR 221 >UniRef50_A6T1Q6 Uncharacterized conserved protein (Phage-related) n=10 Tax=Proteobacteria RepID=A6T1Q6_JANMA Length = 178 Score = 39.5 bits (90), Expect = 0.058, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 52/179 (29%), Gaps = 12/179 (6%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGK------GNEVLYDSAAVIRWYAERD 54 M ++ + A G S ++ G G E +S A A R Sbjct: 1 MGISIRAYARHRGVSDAAVRKAIAAGRITPEADGTIDAERVDREWARNSDAPRNGTATRA 60 Query: 55 AEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFC 114 ++ + + A ++ R +A +++ AR E+V+ Sbjct: 61 VKVAVPEAGGTPGDGPAALPAG--GTSLLQARTVNEVVKAQTNKVRLARLKGELVDRPQA 118 Query: 115 TFVLSRIAGEIASILDGIPLSVQRRFPE----LENRHVDFLKRDIIKAMNKAAALDELI 169 + ++A P + + + L+ + + + + + + Sbjct: 119 IAHVFKLARSERDAWLNWPARISAQMAAKLGVDPHTMHIALEAAVREHLQELGEMRPRV 177 >UniRef50_C7VU90 Predicted protein n=3 Tax=Enterococcus RepID=C7VU90_ENTFA Length = 104 Score = 39.5 bits (90), Expect = 0.059, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDA 55 +N+ ++A S+ TI+ ++ GMP + G + YD RW + Sbjct: 54 LNQTEIAKYLNVSVPTIRQYEMLGMPFGQAGTQSKS--YDKEECRRWLLSQKI 104 >UniRef50_A2RGV6 Putative DNA-binding phage protein n=1 Tax=Streptococcus pyogenes str. Manfredo RepID=A2RGV6_STRPG Length = 91 Score = 39.5 bits (90), Expect = 0.060, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERD 54 +E+N+KQLA + G S + + + G+G + + AV WY Sbjct: 35 LELNQKQLATLLGCSTSRLPEFIYRKDFPKIDRGRGRRLAFPRDAVREWYNNNW 88 >UniRef50_D2C287 Putative uncharacterized protein n=1 Tax=Dickeya dadantii Ech586 RepID=D2C287_DICD5 Length = 173 Score = 39.5 bits (90), Expect = 0.063, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 11/113 (9%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENE 60 M ++K + A G S +T+ +W ++G VL G D +A + A + Sbjct: 1 MLMSKAEYARHCGVSRQTVYDWVKKGDVVLSGAKI------DVSATEQQRASTSNADASP 54 Query: 61 KLRREVE-----ELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEV 108 R VE + D + + RLTR A A+EL DS++ Sbjct: 55 WPHRTVEMTWKQTAEWVRQHDSKEPDEDNYTARLTRLIAAAEELGYDVDSSQY 107 >UniRef50_Q5KVB2 Chromosome-anchoring protein racA n=7 Tax=Geobacillus RepID=RACA_GEOKA Length = 172 Score = 39.5 bits (90), Expect = 0.064, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 7/158 (4%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVI---RWYAERDAEI 57 ME+ +A G S +TIQ W + LR G+ L+D V R E+ A + Sbjct: 1 MELKTSDVAIRLGVSPKTIQRWVRKYNIPLRRNEAGH-YLFDEKTVALLERVKFEQGAAM 59 Query: 58 ENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFC--T 115 E + + + ++ D E + + + +VV Sbjct: 60 EAPPTPKRPPTPLRNNIPIDALHESIEPEIARVSSRLDQLERQLEQKADDVVSIQLLHHR 119 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKR 153 + I + + L+ + ++++ + Sbjct: 120 QEMEEIVARL-TALEQLVARLEQQLNNRPPSSHETSDE 156 >UniRef50_C7LSU4 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=2 Tax=Bacteria RepID=C7LSU4_DESBD Length = 233 Score = 39.1 bits (89), Expect = 0.071, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 4/75 (5%) Query: 1 MEVNKKQLADIFGASIRTIQNWQ-EQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIEN 59 M +N Q+A+ FG S I W ++ MP + + +L++ + V+ W A + Sbjct: 1 MYINLIQIAESFGVSEHVIMEWVRKEDMPHVHDRDR---ILFERSQVMDWAASHGLGGQG 57 Query: 60 EKLRREVEELRQASE 74 L L + E Sbjct: 58 GFLSEPAPSLANSRE 72 >UniRef50_Q1WDJ1 Putative uncharacterized protein n=1 Tax=Streptomyces phage mu1/6 RepID=Q1WDJ1_9CAUD Length = 81 Score = 39.1 bits (89), Expect = 0.073, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKL 62 + ++Q+ +G S T+ W +G PV+R +D A V W AE+ A ++ Sbjct: 12 LQQQQVQAHYGVSDWTVNQWVRKGCPVVRLPNGHR--RFDLAEVKAWMAEQSATGREQRR 69 Query: 63 RREVEELRQASE 74 R+ L Q S Sbjct: 70 RQSEHALSQRSA 81 >UniRef50_Q398F6 Putative uncharacterized protein n=1 Tax=Burkholderia sp. 383 RepID=Q398F6_BURS3 Length = 196 Score = 39.1 bits (89), Expect = 0.074, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 27/195 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPV---------------LRGGGKGNEVLYDSAA-- 45 +N+ + A + S +T+ W+E+G V R G + + Sbjct: 1 MNQSEFAVLHRVSRKTVTKWKERGWLVFAGDEVDVDSSNALLKRYRRDGIQSVTQPEEGN 60 Query: 46 --------VIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQ 97 + R++E+ + ++ + A Sbjct: 61 TKGNKANLTPKRVTSRNSEVTIRDGETAATAAERVLVATGAEMNVDEAKRVKENYLALQA 120 Query: 98 ELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELEN--RHVDFLKRDI 155 +L+ RD+ VV + + ++ S L IP R L++ D L+ I Sbjct: 121 QLEYDRDAGLVVAVSDVAKAVGDEYAKVRSRLLAIPAEHAPRIQRLKSAVEVQDALQEII 180 Query: 156 IKAMNKAAALDELIP 170 +A+ + P Sbjct: 181 TEALEELTRDGVDRP 195 >UniRef50_A0LBP8 Putative uncharacterized protein n=2 Tax=Magnetococcus sp. MC-1 RepID=A0LBP8_MAGSM Length = 174 Score = 39.1 bits (89), Expect = 0.085, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 10/170 (5%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRW--------YAE 52 M +++ + A G S + + ++G+ L G +R E Sbjct: 1 MLLSQSEWARQQGFSRQYVSKLVKKGVVRLVDGKVDPVQASQGLESVREPARPVQRKVME 60 Query: 53 RDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETA 112 + E +L P + R R + E+K ++ + VE Sbjct: 61 SRGPVSAVSSADEGADLLPQGGHAGLPTMLLKARIRSELKRGSLLEIKEKIEAGKYVEAD 120 Query: 113 FCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVD--FLKRDIIKAMN 160 A + L +P + N V L ++I A+ Sbjct: 121 EVKIAAFNRARLVRDQLLKLPDRLAAELAAEANASVVHGTLVKEIRAALE 170 >UniRef50_D0XJ07 Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XJ07_9CAUL Length = 451 Score = 39.1 bits (89), Expect = 0.086, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 6 KQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRR 64 KQ+A+ G S T W + G PV+R G G+ A+ W A D ++ L Sbjct: 10 KQIAEHLGVSPGTAMRWSRRPGFPVIRAGEHGSVYAL-PQALEAWLANADERPDDPDLNP 68 Query: 65 EVEELRQASETDLQPGTIEYERHRLTRAQADAQ 97 + E A ++ T R RA+ A Sbjct: 69 DAEAPDVADRPGIEDRTWLSGPLRAVRARPRAV 101 >UniRef50_B7SYD2 Gp3 n=1 Tax=Stenotrophomonas phage S1 RepID=B7SYD2_9CAUD Length = 214 Score = 39.1 bits (89), Expect = 0.087, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 65/209 (31%), Gaps = 39/209 (18%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEK 61 + K+LA + G + +++G V+ GGKG + AA + YA + Sbjct: 7 TITGKELASLIGCKPSYVVELRKKGRVVVGKGGKG----FLKAASLELYARTADPVYAGV 62 Query: 62 LRREVEELRQASETDLQPGT--------------------------IEYERHRLTRAQAD 95 +R +E A + + R +A AD Sbjct: 63 AQRHADERGSALVGIGEGANAVDADIDDDEDDGDDDEARPSRAGRPQTPDSARKAKALAD 122 Query: 96 AQE-------LKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRH- 147 E + ++ ++ A L+ A ++ + ++ + + Sbjct: 123 KAETDAHMAHIALQKELGLLLPRADVEAFLAEHATTFRGAMERLADTLAPQLAATLDEAG 182 Query: 148 -VDFLKRDIIKAMNKAAALDELIPGLLSE 175 + ++ A+ + + + ++E Sbjct: 183 CRRLVWDEVSHALEELSQGFRTLAAKVAE 211 >UniRef50_Q1NUW0 Excisionase/Xis, DNA-binding n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NUW0_9DELT Length = 248 Score = 38.7 bits (88), Expect = 0.092, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 46/157 (29%), Gaps = 4/157 (2%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAER--DAEIENE 60 +N K+ A S TI+ W G+ GK E ++ + + A Sbjct: 5 LNVKEAAAFLNVSEMTIRRWTNAGLLPCFRIGKKRERRFEPRQLQEYIAPETVPKRAAGT 64 Query: 61 KLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + LR T L E T+ Q L+N + A L Sbjct: 65 TRSLGLGNLRVPDGTHLTHLHDNQEEALHTQVSFIRQGLENGETVLMIAPAASRQRCLQS 124 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIK 157 +A PL+ R + + L I + Sbjct: 125 LAR--GGWQVATPLAQNRLHCDEGRESLADLLAYITR 159 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.304 0.116 0.256 Lambda K H 0.267 0.0349 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 690,639,044 Number of Sequences: 3077464 Number of extensions: 19040383 Number of successful extensions: 132348 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 146 Number of HSP's successfully gapped in prelim test: 257 Number of HSP's that attempted gapping in prelim test: 131766 Number of HSP's gapped (non-prelim): 689 length of query: 189 length of database: 1,040,396,356 effective HSP length: 121 effective length of query: 68 effective length of database: 668,023,212 effective search space: 45425578416 effective search space used: 45425578416 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 88 (38.7 bits)