BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (596 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_D2U4G0 NADH-quinone oxidoreductase chain C/D n=1 Tax=Ar... 1068 0.0 UniRef50_Q2YAA3 NADH-quinone oxidoreductase subunit C/D n=259 Ta... 783 0.0 UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 ... 551 e-155 UniRef50_Q2C5T4 NADH dehydrogenase I, B/C/D subunits n=2 Tax=Pho... 506 e-142 UniRef50_C6NSM4 NADH dehydrogenase I, B/C/D subunits n=1 Tax=Aci... 452 e-125 UniRef50_D2MJM9 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 401 e-110 UniRef50_Q6MIR5 NADH-quinone oxidoreductase subunit C/D n=1 Tax=... 363 1e-98 UniRef50_Q2K3U2 NADH-quinone oxidoreductase subunit D 2 n=7 Tax=... 337 9e-91 UniRef50_B1ZRT0 NADH-quinone oxidoreductase subunit D 1 n=16 Tax... 335 4e-90 UniRef50_A0RMD1 NADH-quinone oxidoreductase subunit C/D n=5 Tax=... 331 5e-89 UniRef50_B2V8J2 NADH-quinone oxidoreductase subunit C/D n=15 Tax... 329 2e-88 UniRef50_D1C6X3 NADH dehydrogenase I, D subunit n=1 Tax=Sphaerob... 324 5e-87 UniRef50_B9L172 NADH dehydrogenase I, D subunit n=1 Tax=Thermomi... 323 9e-87 UniRef50_Q2S5J0 NADH-quinone oxidoreductase subunit D n=5 Tax=Ba... 318 3e-85 UniRef50_Q4P4N9 Putative uncharacterized protein n=1 Tax=Ustilag... 316 2e-84 UniRef50_C1XJB2 NADH dehydrogenase subunit D n=1 Tax=Meiothermus... 316 2e-84 UniRef50_O75306 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 310 1e-82 UniRef50_B0R3U3 NADH dehydrogenase-like complex subunit CD n=16 ... 307 7e-82 UniRef50_Q7NI12 NAD(P)H-quinone oxidoreductase subunit H 1 n=3 T... 304 7e-81 UniRef50_B4SJH6 NADH-quinone oxidoreductase subunit D 1 n=211 Ta... 303 1e-80 UniRef50_A9B4Z7 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=... 302 3e-80 UniRef50_C1D0H4 Putative NADH dehydrogenase (Quinone), subunit D... 300 9e-80 UniRef50_Q1QP34 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=... 298 4e-79 UniRef50_Q2JFL7 NADH-quinone oxidoreductase subunit D n=81 Tax=B... 297 1e-78 UniRef50_B5YL34 NADH-quinone oxidoreductase subunit D 2 n=1 Tax=... 296 1e-78 UniRef50_Q2RJU4 NADH-quinone oxidoreductase subunit D n=94 Tax=F... 296 1e-78 UniRef50_B1W516 NADH-quinone oxidoreductase subunit D 1 n=24 Tax... 296 2e-78 UniRef50_Q67P19 NADH-quinone oxidoreductase subunit D 1 n=1 Tax=... 295 5e-78 UniRef50_B5YKI5 NADH-quinone oxidoreductase subunit D 1 n=12 Tax... 294 6e-78 UniRef50_Q6MDR3 NADH-quinone oxidoreductase subunit D n=2 Tax=Pa... 292 3e-77 UniRef50_Q1IS59 NADH-quinone oxidoreductase subunit D 1 n=2 Tax=... 290 1e-76 UniRef50_A5UXK3 NADH-quinone oxidoreductase subunit D 1 n=20 Tax... 288 4e-76 UniRef50_P56753 NAD(P)H-quinone oxidoreductase subunit H, chloro... 288 5e-76 UniRef50_C9LCY9 NADH dehydrogenase I, C/D subunit n=9 Tax=Bacter... 286 1e-75 UniRef50_D2R5G7 NADH dehydrogenase (Quinone) n=2 Tax=Planctomyce... 284 6e-75 UniRef50_C0Z770 NADH-quinone oxidoreductase chain D n=2 Tax=Baci... 283 1e-74 UniRef50_C6X0Z4 NADH-ubiquinone oxidoreductase chain D n=1 Tax=F... 281 4e-74 UniRef50_C9LVK3 Proton-translocating NADH-quinone oxidoreductase... 279 2e-73 UniRef50_UPI0001C31275 NADH dehydrogenase I, D subunit n=1 Tax=C... 278 4e-73 UniRef50_A9G9T3 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=... 276 1e-72 UniRef50_A5FKI7 NADH-quinone oxidoreductase subunit D n=17 Tax=B... 276 2e-72 UniRef50_A1ALP2 NADH-quinone oxidoreductase subunit D n=1 Tax=Pe... 275 4e-72 UniRef50_C9RKY1 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 275 5e-72 UniRef50_Q5LH50 NADH-quinone oxidoreductase subunit C/D n=34 Tax... 272 3e-71 UniRef50_B8DS05 NADH dehydrogenase (Quinone) n=7 Tax=Deltaproteo... 267 9e-70 UniRef50_UPI00016C492D NADH dehydrogenase subunit D n=1 Tax=Gemm... 267 9e-70 UniRef50_Q30PI1 NADH-quinone oxidoreductase subunit D n=45 Tax=E... 267 1e-69 UniRef50_A7H9V5 NADH-quinone oxidoreductase subunit D 2 n=8 Tax=... 267 1e-69 UniRef50_C1AB36 NADH-quinone oxidoreductase chain D n=1 Tax=Gemm... 265 3e-69 UniRef50_A8VSQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 265 4e-69 UniRef50_B1ZUJ2 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=... 262 3e-68 UniRef50_Q979M3 NADH dehydrogenase I chain D n=6 Tax=Thermoplasm... 260 1e-67 UniRef50_C2BU22 NADH dehydrogenase (Quinone) n=4 Tax=cellular or... 255 4e-66 UniRef50_Q1AVI6 NADH-quinone oxidoreductase subunit D n=1 Tax=Ru... 253 1e-65 UniRef50_A8A9X2 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 243 1e-62 UniRef50_B1VSH7 NADH-quinone oxidoreductase subunit D 2 n=6 Tax=... 242 3e-62 UniRef50_A4XCQ7 NADH-quinone oxidoreductase subunit D 2 n=22 Tax... 237 1e-60 UniRef50_A0B812 F420H2 dehydrogenase subunit C n=6 Tax=Archaea R... 232 3e-59 UniRef50_A6LMC4 NADH-quinone oxidoreductase subunit D n=14 Tax=c... 232 3e-59 UniRef50_Q9KGW7 NADH dehydrogenase I subunit C n=3 Tax=cellular ... 231 9e-59 UniRef50_A3ZL03 NADH dehydrogenase (Ubiquinone) n=1 Tax=Blastopi... 230 9e-59 UniRef50_D2R4P3 NADH dehydrogenase (Quinone) n=3 Tax=Planctomyce... 228 7e-58 UniRef50_UPI00019012E4 NADH dehydrogenase subunit D n=1 Tax=Myco... 227 9e-58 UniRef50_B3ES55 NADH-quinone oxidoreductase subunit D n=19 Tax=B... 227 1e-57 UniRef50_D2PDB9 NADH dehydrogenase (Ubiquinone) n=10 Tax=Sulfolo... 225 3e-57 UniRef50_B6YWP8 Hydrogenase 4, subunit 5 n=1 Tax=Thermococcus on... 221 7e-56 UniRef50_P15689 NADH-ubiquinone oxidoreductase 49 kDa subunit n=... 218 5e-55 UniRef50_B7R5K6 Hydrogenase-4 component G n=1 Tax=Thermococcus s... 217 9e-55 UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 ... 216 2e-54 UniRef50_C0SF51 NADH-ubiquinone oxidoreductase 49 kDa subunit n=... 212 3e-53 UniRef50_B6YTW8 Hydrogenase 4, component G or formate hydrogen l... 210 2e-52 UniRef50_A7C1S4 NADH-ubiquinone oxidoreductase subunit n=3 Tax=c... 208 6e-52 UniRef50_A1RZ50 NADH dehydrogenase (Ubiquinone) n=6 Tax=Archaea ... 207 1e-51 UniRef50_A1RZ40 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 206 1e-51 UniRef50_A8MBT0 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga ... 206 2e-51 UniRef50_B3TC54 Putative Respiratory-chain NADH dehydrogenase, 4... 206 2e-51 UniRef50_D1LDT9 NADH dehydrogenase subunit 7 (Fragment) n=2 Tax=... 206 2e-51 UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=A... 202 3e-50 UniRef50_C7DI97 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus ... 199 2e-49 UniRef50_B5YKR2 Hydrogenase-4 component G n=1 Tax=Thermodesulfov... 199 3e-49 UniRef50_A9A347 NADH dehydrogenase (Quinone) n=3 Tax=Thaumarchae... 198 5e-49 UniRef50_A9BJL6 NADH dehydrogenase (Quinone) n=3 Tax=Thermotogac... 197 8e-49 UniRef50_A1RWL3 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 193 1e-47 UniRef50_B3T914 Putative Respiratory-chain NADH dehydrogenase, 4... 193 2e-47 UniRef50_Q2RXM4 NADH-ubiquinone oxidoreductase n=1 Tax=Rhodospir... 189 2e-46 UniRef50_A1ASR5 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 186 2e-45 UniRef50_B9L625 NADH-ubiquinone oxidoreductase n=3 Tax=Epsilonpr... 186 3e-45 UniRef50_A1AUU6 Ech hydrogenase subunit E n=3 Tax=Bacteria RepID... 184 1e-44 UniRef50_C6WGH3 NADH dehydrogenase (Quinone) n=1 Tax=Actinosynne... 183 2e-44 UniRef50_C5A3D4 Formate hydrogenlyase I subunit F (Mhy1F) n=2 Ta... 183 2e-44 UniRef50_A4WMP9 NADH dehydrogenase (Ubiquinone) n=5 Tax=Thermopr... 182 3e-44 UniRef50_Q0W6T4 [NiFe]-hydrogenase, large subunit (EchE-like) n=... 181 6e-44 UniRef50_Q1PZL4 Similar to membrane-bound [NiFe]-hydrogenase-3, ... 180 1e-43 UniRef50_UPI000186E11F NADH-ubiquinone oxidoreductase 49 kDa sub... 179 4e-43 UniRef50_B5Y915 EchE n=1 Tax=Coprothermobacter proteolyticus DSM... 177 8e-43 UniRef50_A3DNE9 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 175 5e-42 UniRef50_C7NUN7 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus... 174 8e-42 UniRef50_Q0W2B9 Hydrogenase, large subunit-like protein (HycE-li... 172 4e-41 UniRef50_P21301 NADH-ubiquinone oxidoreductase 49 kDa subunit ho... 170 1e-40 UniRef50_Q5DUX5 NADH-ubiquinone oxidoreductase 49 kDa subunit n=... 170 2e-40 UniRef50_B1YB08 NADH dehydrogenase (Quinone) n=5 Tax=Thermoprote... 169 3e-40 UniRef50_B3VS74 NADH-ubiquinone oxidoreductase chain 49kDa n=4 T... 169 3e-40 UniRef50_C5CEV3 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 169 3e-40 UniRef50_C6A3Z3 Membrane-bound hydrogenase MBH 2, subunit Mbh2L ... 169 3e-40 UniRef50_B5IS38 Respiratory-chain NADH dehydrogenase, 49 Kd subu... 168 4e-40 UniRef50_Q1WLV6 Mitochondrial NADH:ubiquinone oxidoreductase 49k... 167 1e-39 UniRef50_D1Z1Z0 Putative [NiFe]-hydrogenase large subunit n=1 Ta... 166 2e-39 UniRef50_A0L9R4 Membrane bound protein complex subunit mbxL n=1 ... 165 4e-39 UniRef50_D1HPS0 Whole genome shotgun sequence of line PN40024, s... 165 4e-39 UniRef50_Q8U0Z6 Mbh12 membrane bound hydrogenase alpha (NADH deh... 165 4e-39 UniRef50_Q2FTW4 Membrane bound hydrogenase subunit mbhL n=3 Tax=... 164 8e-39 UniRef50_UPI000190D906 bifunctional NADH:ubiquinone oxidoreducta... 164 1e-38 UniRef50_P31895 Carbon monoxide-induced hydrogenase n=14 Tax=Bac... 161 8e-38 UniRef50_C4PZT7 NADH-ubiquinone oxidoreductase fe-s protein 2 (N... 160 9e-38 UniRef50_B6YU98 Membrane bound hydrogenase, NiFe-hydrogenase lar... 160 9e-38 UniRef50_B8I2P5 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 160 1e-37 UniRef50_A3DM94 Membrane bound protein complex subunit mbxL n=2 ... 159 2e-37 UniRef50_P16431 Formate hydrogenlyase subunit 5 n=104 Tax=Bacter... 159 4e-37 UniRef50_D2LAG1 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 157 1e-36 UniRef50_C8W240 Hydrogenase, large subunit-like protein n=1 Tax=... 157 2e-36 UniRef50_Q24ST8 Formate hydrogenlyase subunit 5 n=2 Tax=Desulfit... 156 3e-36 UniRef50_A3DKH4 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 ... 154 9e-36 UniRef50_C7N626 Ech hydrogenase subunit E n=25 Tax=cellular orga... 151 7e-35 UniRef50_A6DAC0 Carbon monoxide-induced hydrogenase, large subun... 150 1e-34 UniRef50_P77329 Hydrogenase-4 component G n=130 Tax=Bacteria Rep... 149 3e-34 UniRef50_C0AVB2 Putative uncharacterized protein n=4 Tax=Enterob... 149 3e-34 UniRef50_B2V8R2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 146 2e-33 UniRef50_C6A407 Membrane-bound hydrogenase MBH 1, subunit Mbh1L ... 144 1e-32 UniRef50_B1ZSF2 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 144 1e-32 UniRef50_D1Y9R2 Respiratory-chain NADH dehydrogenase, 49 Kd subu... 141 7e-32 UniRef50_D1YVS8 Ech hydrogenase subunit E n=1 Tax=Methanocella p... 137 9e-31 UniRef50_Q8TY43 Ni,Fe-hydrogenase III large subunit n=1 Tax=Meth... 137 1e-30 UniRef50_C1TPP0 Ni,Fe-hydrogenase III large subunit n=2 Tax=Syne... 136 2e-30 UniRef50_A5GBN1 Ech hydrogenase subunit E n=20 Tax=cellular orga... 136 3e-30 UniRef50_D1ICJ9 Whole genome shotgun sequence of line PN40024, s... 133 2e-29 UniRef50_Q0W3I1 Ech hydrogenase, subunit E n=2 Tax=Euryarchaeota... 128 5e-28 UniRef50_A7I7D0 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 125 4e-27 UniRef50_C7I0C0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 123 2e-26 UniRef50_Q609T9 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 120 1e-25 UniRef50_Q57935 Uncharacterized protein MJ0515 n=17 Tax=Euryarch... 119 3e-25 UniRef50_UPI0001C42022 energy-converting hydrogenase B subunit N... 118 6e-25 UniRef50_B9L8U2 Ech Hydrogenase, Subunit n=3 Tax=Epsilonproteoba... 118 7e-25 UniRef50_B3DZF5 Formate hydrogenlyase subunit 5 n=8 Tax=Bacteria... 116 2e-24 UniRef50_A3CUR5 NADH dehydrogenase (Ubiquinone) n=3 Tax=Methanom... 115 5e-24 UniRef50_A7NIW0 NADH-quinone oxidoreductase subunit C n=6 Tax=Ch... 114 8e-24 UniRef50_C1XWY7 Ni,Fe-hydrogenase III large subunit n=1 Tax=Meio... 114 1e-23 UniRef50_Q2NED9 EhbN n=5 Tax=Methanobacteriaceae RepID=Q2NED9_METST 113 2e-23 UniRef50_Q7G6A6 NAD, putative n=3 Tax=Magnoliophyta RepID=Q7G6A6... 112 3e-23 UniRef50_Q0F384 Hydrogenase subunit n=1 Tax=Mariprofundus ferroo... 109 2e-22 UniRef50_C6PUG2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 108 5e-22 UniRef50_Q1PWG9 NADH-quinone oxidoreductase n=1 Tax=Candidatus K... 108 7e-22 UniRef50_C1RIP5 NADH dehydrogenase subunit C n=2 Tax=Actinomycet... 107 1e-21 UniRef50_Q3ZW31 Hydrogenase, group 4, HycE subunit n=3 Tax=Dehal... 107 1e-21 UniRef50_B2HHH7 Formate hydrogenase HycE n=3 Tax=Actinomycetales... 107 2e-21 UniRef50_A1SE29 NADH-quinone oxidoreductase subunit C n=166 Tax=... 106 2e-21 UniRef50_B5YKI4 NADH-quinone oxidoreductase n=1 Tax=Thermodesulf... 105 4e-21 UniRef50_C8XAS3 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 105 4e-21 UniRef50_Q0EZQ7 NADH-quinone oxidoreductase n=1 Tax=Mariprofundu... 105 5e-21 UniRef50_Q1IS34 NADH (Or F420H2) dehydrogenase, subunit C n=1 Ta... 105 6e-21 UniRef50_D2QGQ3 NADH (Or F420H2) dehydrogenase, subunit C n=1 Ta... 103 2e-20 UniRef50_Q9G4B8 NADH-ubiquinone oxidoreductase n=1 Tax=Thraustoc... 103 2e-20 UniRef50_B9L171 NADH-quinone oxidoreductase n=2 Tax=Thermomicrob... 103 3e-20 UniRef50_D2L9H0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 102 4e-20 UniRef50_UPI0001985C72 PREDICTED: similar to NADH dehydrogenase ... 102 5e-20 UniRef50_Q6APF2 Related to hydrogenase, component E-formate hydr... 102 5e-20 UniRef50_C6XG24 NADH-quinone oxidoreductase n=1 Tax=Candidatus L... 101 8e-20 UniRef50_D0L1P0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 100 1e-19 UniRef50_A0LSU1 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 100 2e-19 UniRef50_B8J7E4 NADH-ubiquinone oxidoreductase chain 49kDa n=14 ... 100 2e-19 UniRef50_Q2S5J1 NADH-quinone oxidoreductase n=3 Tax=Rhodothermac... 100 2e-19 UniRef50_B5YL31 NADH-quinone oxidoreductase n=1 Tax=Thermodesulf... 99 4e-19 UniRef50_A8M620 NADH-quinone oxidoreductase subunit C n=14 Tax=A... 99 4e-19 UniRef50_C0VVL4 NADH dehydrogenase subunit C n=1 Tax=Corynebacte... 99 4e-19 UniRef50_B0TH79 Proton-translocating NADH-ubiquinone oxidoreduct... 99 5e-19 UniRef50_Q58433 Uncharacterized protein MJ1027 n=12 Tax=Methanoc... 99 7e-19 UniRef50_D0LPX5 NADH-quinone oxidoreductase n=1 Tax=Haliangium o... 98 7e-19 UniRef50_A5G9B7 NADH-quinone oxidoreductase subunit C n=9 Tax=De... 98 1e-18 UniRef50_B3CSH0 NADH-quinone oxidoreductase n=2 Tax=Orientia tsu... 97 1e-18 UniRef50_C1F9E1 NADH-quinone oxidoreductase n=1 Tax=Acidobacteri... 97 2e-18 UniRef50_UPI0000D52FC7 NADH Dehydrogenase I Chain C n=1 Tax=Psyc... 97 2e-18 UniRef50_A8IHL3 NADH:ubiquinone oxidoreductase ND9 subunit n=2 T... 97 2e-18 UniRef50_A4GJ20 NADH-quinone oxidoreductase n=1 Tax=uncultured m... 97 3e-18 UniRef50_A0LRI3 NADH-quinone oxidoreductase subunit C n=4 Tax=Fr... 96 3e-18 UniRef50_B4UIA8 NADH (Or F420H2) dehydrogenase, subunit C n=4 Ta... 96 3e-18 UniRef50_B4UIA3 NADH-quinone oxidoreductase n=4 Tax=Anaeromyxoba... 96 3e-18 UniRef50_UPI0001693946 NADH dehydrogenase subunit C n=1 Tax=Paen... 96 4e-18 UniRef50_C9RJJ7 NADH (Or F420H2) dehydrogenase, subunit C n=1 Ta... 95 8e-18 UniRef50_Q2W3I6 NADH-quinone oxidoreductase subunit C n=6 Tax=ce... 95 9e-18 UniRef50_B8J1D5 NADH-quinone oxidoreductase n=1 Tax=Desulfovibri... 94 1e-17 UniRef50_Q2G5Y5 NADH-quinone oxidoreductase subunit C n=36 Tax=A... 94 1e-17 UniRef50_Q0CI54 NADH-ubiquinone oxidoreductase 30.4 kDa subunit,... 94 1e-17 UniRef50_Q02CU1 NADH-quinone oxidoreductase n=1 Tax=Candidatus S... 94 2e-17 UniRef50_Q1D8S6 NADH dehydrogenase I, C subunit n=2 Tax=Cystobac... 94 2e-17 UniRef50_D1CCD3 NADH-quinone oxidoreductase n=1 Tax=Thermobaculu... 94 2e-17 UniRef50_Q6KZ65 NADH-quinone oxidoreductase chain C n=4 Tax=Ther... 93 3e-17 UniRef50_UPI0001C31274 NADH (or F420H2) dehydrogenase, subunit C... 93 3e-17 UniRef50_B3QUS1 NADH-quinone oxidoreductase n=1 Tax=Chloroherpet... 92 4e-17 UniRef50_D1RAG7 NADH-quinone oxidoreductase n=2 Tax=Parachlamydi... 92 5e-17 UniRef50_A9GUY8 NADH-quinone oxidoreductase n=1 Tax=Sorangium ce... 92 6e-17 UniRef50_A4ITI5 NADH-quinone oxidoreductase chain C n=73 Tax=Bac... 92 6e-17 UniRef50_A9MAI1 NADH-quinone oxidoreductase subunit C n=86 Tax=c... 92 6e-17 UniRef50_A9W1N1 NADH-quinone oxidoreductase subunit C n=9 Tax=Al... 92 8e-17 UniRef50_A8LIT7 NADH-quinone oxidoreductase subunit C n=51 Tax=A... 91 9e-17 UniRef50_C0Z771 NADH-quinone oxidoreductase n=1 Tax=Brevibacillu... 91 1e-16 UniRef50_B3ET79 NADH-quinone oxidoreductase n=1 Tax=Candidatus A... 91 1e-16 UniRef50_D2LH96 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 91 1e-16 UniRef50_P23710 NADH-ubiquinone oxidoreductase 30.4 kDa subunit,... 90 2e-16 UniRef50_D2R5G8 NADH (Or F420H2) dehydrogenase, subunit C n=1 Ta... 90 2e-16 UniRef50_Q5WT22 NADH-quinone oxidoreductase subunit C n=4 Tax=Le... 90 2e-16 UniRef50_B3PY58 NADH-quinone oxidoreductase subunit C 2 n=9 Tax=... 89 4e-16 UniRef50_Q28T74 NADH-quinone oxidoreductase subunit C n=7 Tax=Al... 89 5e-16 UniRef50_Q04YA6 NADH dehydrogenase (Ubiquinone), C chain n=6 Tax... 89 5e-16 UniRef50_A9VS96 NADH (Or F420H2) dehydrogenase, subunit C n=15 T... 89 5e-16 UniRef50_B2UPT7 NADH-quinone oxidoreductase n=1 Tax=Akkermansia ... 89 6e-16 UniRef50_C0QBF7 HyfG n=3 Tax=Bacteria RepID=C0QBF7_DESAH 89 6e-16 UniRef50_B3DXN6 NADH-quinone oxidoreductase n=1 Tax=Methylacidip... 89 7e-16 UniRef50_A5UWP3 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 ... 88 9e-16 UniRef50_A9B5Q0 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 88 1e-15 UniRef50_B0C6C5 NAD(P)H-quinone oxidoreductase subunit J n=1 Tax... 87 1e-15 UniRef50_C6W0T5 NADH-quinone oxidoreductase n=2 Tax=Flexibactera... 87 1e-15 UniRef50_C7LSU9 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 87 2e-15 UniRef50_Q67KN8 NADH-quinone oxidoreductase n=1 Tax=Symbiobacter... 87 2e-15 UniRef50_Q2RU38 NADH-quinone oxidoreductase subunit C n=18 Tax=A... 87 2e-15 UniRef50_C6NX38 Ni,Fe-hydrogenase III large subunit n=1 Tax=Acid... 87 2e-15 UniRef50_A1HPT3 NADH (Or F420H2) dehydrogenase, subunit C n=1 Ta... 87 2e-15 UniRef50_Q9G8U3 NADH dehydrogenase subunit 9 n=1 Tax=Rhodomonas ... 87 2e-15 UniRef50_C1ZK67 NADH-quinone oxidoreductase n=1 Tax=Planctomyces... 87 3e-15 UniRef50_Q01UP0 NADH-quinone oxidoreductase n=1 Tax=Candidatus S... 86 3e-15 UniRef50_B3E6C1 NADH-ubiquinone oxidoreductase chain 49kDa n=2 T... 86 3e-15 UniRef50_Q1CRZ9 NADH-quinone oxidoreductase n=15 Tax=Helicobacte... 86 3e-15 UniRef50_Q21TB4 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 86 4e-15 UniRef50_A5FW46 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 86 4e-15 UniRef50_Q7VFS4 Donor-ubiquinone reductase I n=2 Tax=Helicobacte... 86 5e-15 UniRef50_A9KBK6 NADH-quinone oxidoreductase subunit C n=7 Tax=Co... 85 6e-15 UniRef50_B2WTG3 NADH dehydrogenase subunit 9 n=2 Tax=unclassifie... 85 7e-15 UniRef50_Q30PI0 NADH-quinone oxidoreductase n=9 Tax=Epsilonprote... 85 7e-15 UniRef50_P34944 NADH-ubiquinone oxidoreductase 27 kDa subunit n=... 85 8e-15 UniRef50_C3XE99 NADH-quinone oxidoreductase n=1 Tax=Helicobacter... 85 8e-15 UniRef50_A1KEQ8 Possible formate hydrogenase hycQ (FHL) n=14 Tax... 85 8e-15 UniRef50_Q56219 NADH-quinone oxidoreductase subunit 5 n=5 Tax=Th... 85 8e-15 UniRef50_A6FCN4 NADH-quinone oxidoreductase n=1 Tax=Moritella sp... 84 1e-14 UniRef50_C7M2T9 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 84 1e-14 UniRef50_Q5GT42 NADH-quinone oxidoreductase subunit C n=19 Tax=R... 84 2e-14 UniRef50_Q11XR7 NADH-quinone oxidoreductase n=4 Tax=Sphingobacte... 84 2e-14 UniRef50_A9G9T0 NADH-quinone oxidoreductase n=1 Tax=Sorangium ce... 84 2e-14 UniRef50_Q31HF8 NADH-quinone oxidoreductase subunit C n=4 Tax=Pr... 83 3e-14 UniRef50_Q3BRN1 NADH-quinone oxidoreductase subunit C n=30 Tax=G... 83 3e-14 UniRef50_Q1RJI7 NADH-quinone oxidoreductase subunit C n=15 Tax=R... 82 4e-14 UniRef50_Q95748 NADH-ubiquinone oxidoreductase 27 kDa subunit n=... 82 4e-14 UniRef50_Q1V2T1 NADH-quinone oxidoreductase n=4 Tax=Bacteria Rep... 82 6e-14 >UniRef50_D2U4G0 NADH-quinone oxidoreductase chain C/D n=1 Tax=Arsenophonus nasoniae RepID=D2U4G0_9ENTR Length = 614 Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust. Identities = 506/599 (84%), Positives = 545/599 (90%), Gaps = 4/599 (0%) Query: 1 MTDLTAQE---PAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVG 57 +TD QE P WQT DH DDP+I LRN+F PDAFT+Q+TRTG+ V+WIKREQLL V Sbjct: 17 ITDQITQESVRPVWQTYDHCDDPIILALRNQFSPDAFTIQSTRTGMLVIWIKREQLLAVI 76 Query: 58 DFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEND 117 +FLKK PKPYVMLFDLHG+DER R +R GLP ADFSVFYHLISI+RNRDIMLKVAL+E D Sbjct: 77 EFLKKQPKPYVMLFDLHGVDERQRVYRHGLPDADFSVFYHLISIERNRDIMLKVALSEKD 136 Query: 118 LHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 177 L+VP+ LFPNANWYERE WD+FGITF GHPNLRR++MP TW+GHPL KDYPARATEF Sbjct: 137 LNVPSLVSLFPNANWYEREVWDMFGITFTGHPNLRRLLMPVTWQGHPLCKDYPARATEFD 196 Query: 178 PFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEE 237 PF LTK K DLEME+LTFKPEEWGM RG E+EDFMFLNLGPNHPS+HGAFRIVLQLDGEE Sbjct: 197 PFVLTKQKLDLEMESLTFKPEEWGMARGNEHEDFMFLNLGPNHPSSHGAFRIVLQLDGEE 256 Query: 238 IVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPD 297 I+DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGI VP+ Sbjct: 257 IIDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIDVPE 316 Query: 298 RVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPA 357 RV IRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYD++EAITGFRMHPA Sbjct: 317 RVMTIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDIIEAITGFRMHPA 376 Query: 358 WFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALE 417 WFRIGGVAHDLP+GW +LL+EFLDWMPKRL SY KAALQN+ILKGRS GVAAY KEAL+ Sbjct: 377 WFRIGGVAHDLPQGWQKLLQEFLDWMPKRLDSYVKAALQNSILKGRSVGVAAYTTKEALD 436 Query: 418 WGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRIL 477 WG TGAGLRATG+DFD+RK RPYSGYENF+FE+P+G DCY RVMLKVEELRQSL IL Sbjct: 437 WGVTGAGLRATGLDFDIRKWRPYSGYENFEFEVPIGNN-GDCYDRVMLKVEELRQSLHIL 495 Query: 478 EQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATK 537 +QCLNNMP GPFKADHPLTTPPPKERTLQHIET+I HFLQVSWGPVMPANE+FQMIEATK Sbjct: 496 KQCLNNMPAGPFKADHPLTTPPPKERTLQHIETMINHFLQVSWGPVMPANEAFQMIEATK 555 Query: 538 GINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 GINSYYLTSDG+TMSYRTRVRTPSFAHLQQIPA IRGSLVSDLIVYLGSIDFVMSDVDR Sbjct: 556 GINSYYLTSDGNTMSYRTRVRTPSFAHLQQIPAVIRGSLVSDLIVYLGSIDFVMSDVDR 614 >UniRef50_Q2YAA3 NADH-quinone oxidoreductase subunit C/D n=259 Tax=cellular organisms RepID=NUOCD_NITMU Length = 608 Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/585 (62%), Positives = 450/585 (76%), Gaps = 10/585 (1%) Query: 21 VIGELRNRFGPDAF--------TVQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVMLF 71 V+ EL+NRFGP VQ T +P W+ R ++ EV +LK K +PY ML+ Sbjct: 25 VLEELKNRFGPPGTDNPGGPMGVVQKTGDDLPTQWVSRNRVHEVLHYLKLKAERPYRMLY 84 Query: 72 DLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNAN 131 DL +DER R HRE PA+ F+V YHL+S +RN D+ LKVAL + DL +PT T ++P AN Sbjct: 85 DLTAIDERTRVHREDQPASRFTVIYHLLSFERNADVCLKVALTDTDLRMPTITDIWPAAN 144 Query: 132 WYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEME 191 WYERE WD+FGI FDGHP+LRRI++P W+GH LRKD+PARATE PF L+ K++ E E Sbjct: 145 WYEREIWDMFGIVFDGHPHLRRILLPPWWQGHALRKDHPARATEMEPFHLSTEKEEAEQE 204 Query: 192 ALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRG 251 L F PEEWGM+R + DFMFLNLGPNHPS HG FRIVLQLDGEEI+D VP+IG+HHRG Sbjct: 205 TLRFHPEEWGMRRTHDGTDFMFLNLGPNHPSVHGVFRIVLQLDGEEIIDAVPEIGFHHRG 264 Query: 252 AEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFR 311 AEKMGERQSWH+YIPYTDRI+YLGG +N +PYVLAVEKLAGI VPDRV V+RVM++E FR Sbjct: 265 AEKMGERQSWHTYIPYTDRIDYLGGVMNNLPYVLAVEKLAGIEVPDRVKVMRVMMAEFFR 324 Query: 312 INSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRG 371 I SHL++ TF QD+GA++PVFF FTDR++++D+VEAI G RMHP+W+RIGGVA DLP G Sbjct: 325 IASHLVFYGTFTQDLGALSPVFFMFTDRERVFDVVEAICGGRMHPSWYRIGGVAQDLPNG 384 Query: 372 WDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGID 431 WDR++R+FLD+MP RL Y+K A+ N ILK R++GV Y EA+EWG TG LRA G + Sbjct: 385 WDRMVRDFLDYMPARLDEYDKIAVGNRILKARTRGVGGYSIDEAIEWGVTGPNLRACGFE 444 Query: 432 FDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKA 491 +D RKARPYSGY+ F+F++P G DCY R ++V+E+RQSLRI++QCL NMP G KA Sbjct: 445 WDFRKARPYSGYDQFEFDVPTGQH-GDCYDRCAVRVQEIRQSLRIIDQCLENMPAGAHKA 503 Query: 492 DHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM 551 DHPLTTPP K+ TL IETLI HFL VSWGPV+P E+F IEATKG N YYL SDG+T Sbjct: 504 DHPLTTPPLKKHTLHDIETLIDHFLGVSWGPVIPPGEAFVGIEATKGNNGYYLISDGNTT 563 Query: 552 SYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +YR R+RTPSF HLQ IP RG ++SDLI LGSIDFVM+DVDR Sbjct: 564 AYRVRIRTPSFPHLQMIPLISRGLMISDLIAILGSIDFVMADVDR 608 >UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 Tax=cellular organisms RepID=NUBCD_PELCD Length = 794 Score = 551 bits (1420), Expect = e-155, Method: Compositional matrix adjust. Identities = 274/578 (47%), Positives = 375/578 (64%), Gaps = 11/578 (1%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKK-LPKPYVMLFDLHGMDE 78 P++ +LR RFG D Q +P + Q+ E+ FLK+ + +PY L DL +DE Sbjct: 227 PLLEQLRERFGDD--VRQEEGADMPTLVADPAQVPELLRFLKQDIDQPYERLEDLTAIDE 284 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R+ R PA D ++ YHL+S +R + +K L + VP+ T L+P ANWYERE + Sbjct: 285 TARSQR---PAHDLTMVYHLLSFERAGYLRVKAPLRNDRAEVPSITGLWPAANWYEREAF 341 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 D+FG+ F GHP+LRRI+MP+ W+GHPLRK +P+RAT+ PF A + E F Sbjct: 342 DMFGVRFAGHPDLRRILMPEGWQGHPLRKSHPSRATDMPPFTRDTATTMVPPEGSHF--- 398 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 + + +N+ LNLGP HP HG R++LQL GEEIVD +IGYHHRGAEK+ ER Sbjct: 399 -FSNRAPVDNQSLSILNLGPQHPGTHGILRVILQLAGEEIVDLDSEIGYHHRGAEKIAER 457 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY 318 Q W+ YIPYTDRI+YL G +N + Y+ +VE L G+ VP R IRV+LSELFRI SHL++ Sbjct: 458 QHWNQYIPYTDRIDYLAGSLNNLAYLYSVETLCGVEVPPRARYIRVLLSELFRIASHLVW 517 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 + TF DVGAMTPVF+AF R+KI+D++E ITG RMHPAWFRIGGV DLP GW + Sbjct: 518 LGTFAHDVGAMTPVFYAFDSREKIFDIIELITGGRMHPAWFRIGGVPDDLPDGWLAAVEA 577 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 F R+ +++ I + R++G+ ++A+E G +G LRATG+ +D+RK+ Sbjct: 578 FTRDFEARIDEFDRLLTGGPIFRARTEGIGTVSRQQAVELGFSGPNLRATGLAWDLRKSM 637 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY GY+ FDF++ GG DC+ R ++++ ELRQSLRI+ Q MP+G + +D Sbjct: 638 PYGGYDEFDFDVVTAGG-GDCFARYLVRLGELRQSLRIVRQAAEGMPQGRWISDQYRYAY 696 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 P +E LQ IE+LI HFL VS GP P E ++ IE++KG YY SDG T +YR R+R Sbjct: 697 PKREDGLQDIESLIHHFLHVSRGPAAPRGECYRAIESSKGECGYYAVSDGGTGAYRLRIR 756 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 TPSF HLQ +P RG LV+D+I LGS+D+V++D+DR Sbjct: 757 TPSFPHLQALPQLSRGRLVADVITILGSLDYVLADLDR 794 >UniRef50_Q2C5T4 NADH dehydrogenase I, B/C/D subunits n=2 Tax=Photobacterium RepID=Q2C5T4_9GAMM Length = 565 Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust. Identities = 251/558 (44%), Positives = 353/558 (63%), Gaps = 19/558 (3%) Query: 42 GVPVVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLIS 100 G +K+E L++ FLK + + MLFDL +DE R SVFY+L+S Sbjct: 24 GCESFEVKKEHLIDTLHFLKNEASSRFEMLFDLSAIDECER-------GGGLSVFYYLLS 76 Query: 101 IDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW 160 + + I ++ +A + + VPT L+PNANWYERE +D+FGI F HP+LRRI+ W Sbjct: 77 VKNKQFISIRTHIANDTIEVPTVVGLWPNANWYEREVYDMFGIKFTDHPDLRRILTFDFW 136 Query: 161 KGHPLRKDYPARATEFS-PFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPN 219 KGHPLRK YP RAT PF+L D M++ + G +++ M LN+GPN Sbjct: 137 KGHPLRKSYPCRATLMDEPFDLEGPDFDDVMKSYDIQ--------GKQDDGSMVLNIGPN 188 Query: 220 HPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 HP G R+ +++ GE I D +IG+HHRGAEK+ ER ++H+YIPYTDRI+YLGG Sbjct: 189 HPGTDGVIRLKVKMKGEFIEDLDQEIGFHHRGAEKIAERHTFHNYIPYTDRIDYLGGVAG 248 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDR 339 E+PY+L +E + GI VP+R +R+ML ELFRI+SHL++ + ++G M P F+AFT+R Sbjct: 249 ELPYLLGLEAMTGIEVPERAKTMRIMLCELFRISSHLVWFGSITHNLGGMAPAFYAFTER 308 Query: 340 QKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTI 399 +KI+D++E I G RMHPA+FRIGGV+ DLP GW + + + + EK + I Sbjct: 309 EKIFDVIELICGGRMHPAFFRIGGVSQDLPDGWQDKVEHACQGIEQLVPDLEKLMTHSMI 368 Query: 400 LKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDC 459 K R+Q +A Y AL+WG TG LRATGI+FD+RK PY GYE++DF++PVG D Sbjct: 369 FKIRTQNIAVYSQSMALDWGLTGPNLRATGINFDMRKDFPYMGYEDYDFDVPVGQD-GDA 427 Query: 460 YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH-PLTTPPPKERTLQHIETLITHFLQV 518 YTR +L+V+E+ +SL+I+ Q MPEGP AD+ P P K+ L+ IETLI F+ Sbjct: 428 YTRTVLRVQEVVESLKIIRQAAARMPEGPILADNAPSFGFPRKQNALRDIETLIHSFVDT 487 Query: 519 SWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVS 578 G P E+F E KG+ SY+ S+G+ YR R+RTPSF H Q + A +G L+S Sbjct: 488 GRGFNFPVAETFYATETAKGVTSYHTISNGTGCPYRVRIRTPSFTHFQSVKAVSKGDLLS 547 Query: 579 DLIVYLGSIDFVMSDVDR 596 ++I +GSID+V++D+DR Sbjct: 548 NIICLIGSIDYVLADIDR 565 >UniRef50_C6NSM4 NADH dehydrogenase I, B/C/D subunits n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSM4_9GAMM Length = 565 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 238/535 (44%), Positives = 327/535 (61%), Gaps = 18/535 (3%) Query: 65 KPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFT 124 PY L+DL MDER F++ YHL + + L+V L P+ T Sbjct: 46 SPYRCLWDLTAMDERPS-------GGGFTLIYHLFNYAVGELLRLRVPLPAGQETAPSLT 98 Query: 125 KLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKA 184 L+ NANWYERE +DLFG+ F GHP+LRRI++P W+GHPLRK+ RATE P + + Sbjct: 99 DLYANANWYEREVYDLFGLRFAGHPDLRRILLPPQWRGHPLRKEEAIRATERPPIVIDRE 158 Query: 185 KQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPD 244 + P+ + G + M LN+GP+HP HG R +L+L GEEIV PD Sbjct: 159 HLQERLGEYQRSPDGQALDDG----ETMVLNVGPHHPGTHGILRYILRLRGEEIVAVDPD 214 Query: 245 IGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRV 304 IGYHHRG EK+ E S+H++IPYTDR++YLGG + E PY+ A+EKLA I VP+R IR Sbjct: 215 IGYHHRGVEKIAEGHSYHNFIPYTDRVDYLGGVLGEWPYLRAIEKLAAIHVPERAEGIRT 274 Query: 305 MLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV 364 +L+EL RI+SHL+++ ++ D+G M P F+AF DR + +L+E TG R+HP +FRIGGV Sbjct: 275 LLAELCRISSHLVWLGSYGNDLGTMGPAFYAFRDRAWLLELMERFTGGRLHPQFFRIGGV 334 Query: 365 AHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAG 424 A DLP GW L L + K L E+ ++N I + R++GV A++A W T Sbjct: 335 ADDLPEGWRSDLLALLRRIEKGLPDSERLTVENPIFRARTEGVGVVTAEQAERWCATSIL 394 Query: 425 LRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM 484 LR+TG FD+RKA PY Y+ DFE+PV D ++R L + E+R+S+RIL Q + + Sbjct: 395 LRSTGRAFDLRKAAPYGLYDRVDFEVPV-TTAGDAWSRTWLHIAEIRESIRILRQLADIL 453 Query: 485 PEGP-FKADHPLTTPPPKERTLQHIETLITHFLQV--SWGPVMPANESFQMIEATKGINS 541 PEGP D PL PK RTL IETLI HF Q+ ++GP P + + E+ +G+ Sbjct: 454 PEGPTLACDAPLAL-MPKSRTLLDIETLIHHFEQMADAFGP--PPGSALGLGESARGLLG 510 Query: 542 YYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Y++ SDG YR RVRT SFAH+Q I RG + D I +GS+D+V++D+DR Sbjct: 511 YFVVSDGGPKPYRLRVRTGSFAHVQMITELGRGLRLPDFIATIGSLDYVLADLDR 565 >UniRef50_D2MJM9 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJM9_9BACT Length = 583 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 224/602 (37%), Positives = 330/602 (54%), Gaps = 48/602 (7%) Query: 21 VIGELRNRFGPDAFTVQAT-RTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDER 79 V+ L RF +V+ + G ++ + L+EV FL P M FD Sbjct: 4 VLETLHERFPEAVLSVREDPQRGDLSAQVRAQDLVEVARFLHDDPG---MAFD------- 53 Query: 80 LRTHREGLPAAD-------FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANW 132 H + +AD F V YH +S+ N I LK + E + T T ++ AN+ Sbjct: 54 ---HLTDICSADYPDDLERFEVIYHFLSLPHNTRIRLKTRVTEEQPTLGTVTSIWKGANF 110 Query: 133 YERETWDLFGITFDGHPNLRRIMMPQTWK-GHPLRKDYPARATEF-SPFELTKAKQDLEM 190 ERE +DL GITF+GHP+LRRI++P+ ++ GHPLRKD+P + S F+ + E Sbjct: 111 LEREVYDLMGITFEGHPDLRRILLPEDYEEGHPLRKDFPTEGKGWRSTFDFIPRLDEPE- 169 Query: 191 EALTFKPEEWGMKRGTENEDFMFL----------------NLGPNHPSAHGAFRIVLQLD 234 EW + +++ MFL N+GP HPS HG R+VL+LD Sbjct: 170 -------SEWTEREIPQDQRHMFLAGDAPESAKRTTELLLNMGPQHPSTHGVLRVVLELD 222 Query: 235 GEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT 294 GE + VPD+GY HRG EK+ E + IP+TDR++Y+ N YV AVEKL G+T Sbjct: 223 GERVAKAVPDMGYLHRGVEKLAEGLHYMQVIPHTDRLDYVCAMTNNYAYVRAVEKLVGVT 282 Query: 295 VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRM 354 +P+R +R +++E+ RI HL ++ T D+GAMT F+ F +R+ + D E + G R+ Sbjct: 283 IPERAEYVRTIVAEVQRIVGHLFWLGTQALDIGAMTVFFWTFREREVLLDFFEQLCGARL 342 Query: 355 HPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKE 414 ++RIGGV DL LR FL P+ + Y+ +N I R++ VA A++ Sbjct: 343 TLNYYRIGGVDGDLTPALIERLRGFLKTFPEHVQEYDTLLQRNRIWVARTKNVAVISAED 402 Query: 415 ALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSL 474 A+ +G TG LR +G+ +DVRK PY Y+ ++++PVG G D Y R ++VEE++QS Sbjct: 403 AINFGLTGPTLRGSGVAYDVRKLEPYGVYDRVEWDVPVGKG-GDTYDRYWIRVEEMKQSA 461 Query: 475 RILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIE 534 RI+EQCL+ +PEGP AD P PP K ++ +E+LI HF+ + G P E++ E Sbjct: 462 RIIEQCLDQLPEGPIMADMPQVIPPAKPNVMRDMESLIHHFIIFTQGFKPPKGETYCGTE 521 Query: 535 ATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 KG ++L SDGS YR ++R+PSF H+ RG L+SD+I G+ D VM + Sbjct: 522 VPKGELGFFLISDGSPRPYRMKIRSPSFVHMGAFDFMARGYLISDIITIFGTYDIVMGEC 581 Query: 595 DR 596 DR Sbjct: 582 DR 583 >UniRef50_Q6MIR5 NADH-quinone oxidoreductase subunit C/D n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOCD_BDEBA Length = 560 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 198/555 (35%), Positives = 300/555 (54%), Gaps = 34/555 (6%) Query: 56 VGDFLKKLPK---PYVMLF-----------DLHGMDERLRTHREGLPAADFSVFYHLISI 101 VGD + ++PK P ++LF D+ G D R R F V Y+L + Sbjct: 26 VGDDVIEVPKEDAPALLLFLRESGQFDFLMDVCGADYPSREKR-------FDVVYNLFNS 78 Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 + + +K + E + + T + A+W+ERE +D+FGI F+GHPNLR+I+ + Sbjct: 79 KDSSRLRVKAQVGEGE-SIGTAIPAYRGADWFEREAYDMFGIIFEGHPNLRKILTHHQFV 137 Query: 162 GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHP 221 GHPLRKDY A + L + F E G N+ ++ LN+GP+H Sbjct: 138 GHPLRKDYDANNQQACTNSL----------PIHFN-NEPGSPGDVLNDKYLPLNIGPSHT 186 Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEM 281 + HG R++ ++DGE IV C +IGY HR EKM E ++ IPYTDR+ Y +N + Sbjct: 187 AMHGTLRVMAEMDGETIVRCNNEIGYLHRCFEKMAETHPYNQVIPYTDRLNYCSAPMNNI 246 Query: 282 PYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQK 341 Y AVE+L G+ +P + +RV+L+EL RI H + I T D+GA+T F+ F R+K Sbjct: 247 GYCKAVERLLGVEIPPKAQAMRVILAELSRIIDHTIAIGTGAMDLGALTSFFYMFGMREK 306 Query: 342 IYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILK 401 +Y L E + G R+ + RIGG+A D P GW + + + K + N I Sbjct: 307 VYGLFEKLCGARLTVSMTRIGGMAQDAPEGWFDEVLALVKEIRKGTDEMANMVIDNKIFI 366 Query: 402 GRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYT 461 R++ V A +A++WG TG LRA G++ D+RKA+PY GY+ DF++PVG D Y Sbjct: 367 QRTKNVCPVSAADAIQWGYTGPMLRACGVNLDLRKAQPYYGYDALDFDVPVGTN-GDIYD 425 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWG 521 R +++ EE+RQS+RI+EQ N+P G + P K+ +IE L+ HF+ + G Sbjct: 426 RYLVRFEEMRQSVRIIEQVCKNVPGGDYTIRDKGIVLPEKKDVYGNIEGLMNHFMLIIKG 485 Query: 522 PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLI 581 P E + EA G +YL SDGS YR +VR P FA Q P ++G++++D I Sbjct: 486 LRPPVGEVYDATEAANGELGFYLVSDGSANPYRLKVRPPCFAIYQSFPTVVKGAMLADAI 545 Query: 582 VYLGSIDFVMSDVDR 596 + S++ + ++DR Sbjct: 546 ATVASMNLIAGELDR 560 >UniRef50_Q2K3U2 NADH-quinone oxidoreductase subunit D 2 n=7 Tax=Proteobacteria RepID=NUOD2_RHIEC Length = 404 Score = 337 bits (864), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 166/386 (43%), Positives = 239/386 (61%), Gaps = 2/386 (0%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + LNLGP HPS HG R+VL+LDGE + P IGY HRG EK+ E ++ P TDR+ Sbjct: 20 VLLNLGPQHPSTHGVLRLVLELDGEFVERVDPHIGYLHRGTEKLAESFTYTQIFPLTDRL 79 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +YL N + + LAVEKL GI P R IRVM++EL RI+ HLL D+GAMT Sbjct: 80 DYLCPPSNNLAFALAVEKLLGIEAPIRAQYIRVMMAELARISGHLLITGALPMDLGAMTA 139 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + + +R+ I DL+E ITG RMH ++ R+GGV DLP G+ +REF D P R+ YE Sbjct: 140 LLYVMREREMIMDLLEMITGARMHTSFCRVGGVREDLPDGFFPKIREFCDIFPNRIRDYE 199 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + N + R++G+ A++A++ G +G LRA+G+D+D+R+ PY Y+ DF + Sbjct: 200 RLLEDNRVFLNRTKGIGVISAEDAVDLGLSGPNLRASGVDWDIRRDEPYEIYDRLDFNV- 258 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHP-LTTPPPKERTLQHIET 510 + DCY R +V+E+R+S+RI+EQC++ MPEGPF+ D P + P K+R +E Sbjct: 259 ITRDEGDCYARWRCRVDEMRESMRIIEQCIDQMPEGPFQIDMPTIAFPLDKDRVHCSMEA 318 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 LI HF ++G +P E + IEA KG +Y+ SDGS +R +VR PSF +LQ + Sbjct: 319 LIQHFDLSAYGFKVPKGEVYSAIEAPKGELGFYIISDGSPKPFRMKVRAPSFVNLQALFG 378 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++D+I LGS+D VM++VD+ Sbjct: 379 VTNARYLADMIAVLGSLDPVMAEVDK 404 >UniRef50_B1ZRT0 NADH-quinone oxidoreductase subunit D 1 n=16 Tax=Bacteria RepID=NUOD1_OPITP Length = 426 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 171/401 (42%), Positives = 243/401 (60%), Gaps = 6/401 (1%) Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 P+E G G D M L++GP+HPS HG RI ++L+GE + P IGY HRG EK+ Sbjct: 31 PDEGGEFSG----DRMSLSMGPSHPSTHGVLRIQMELEGEILTKADPIIGYLHRGDEKIA 86 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 E +++ ++PYTDR++YL N M YV+AVEKLAG+TVP R IRV+ +EL RI+SHL Sbjct: 87 ENMTYNQFVPYTDRLDYLAPLANNMAYVIAVEKLAGLTVPPRCQAIRVITAELARISSHL 146 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 + + F DVGA T + + R+ +Y+L E +TG R ++ RIGGV D+P GW + Sbjct: 147 MGLGAFGLDVGAWTVLVLSLNQREFLYNLFEDLTGARFTTSYTRIGGVTRDVPPGWLENV 206 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 F D L +N I R+ GV ++A+ +G TG R +GI D+RK Sbjct: 207 GTFCDKFLPALEEILSLLTRNKIFLDRTVGVGVISKEDAIAYGITGPNARGSGIATDLRK 266 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 RPYSGYE ++F++PVG DCY R +++ EE+RQS+RI+ Q + N P G + A Sbjct: 267 DRPYSGYEQYEFDVPVGTK-GDCYDRYLVRGEEMRQSVRIIRQVIKNFPGGDWYATEAKK 325 Query: 497 T-PPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT 555 PPK + L +E LI F+ V+ GP MPA E + E KGI +Y+ S G + YR Sbjct: 326 VFLPPKGKVLSSMEELIQQFMLVTEGPQMPAGEVYFEAENPKGILGFYIVSKGGGVPYRL 385 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++R+PSF +L +P +G L+SD++ LGS+DFVM + DR Sbjct: 386 KIRSPSFCNLSLVPKLCQGVLISDVVAILGSLDFVMGECDR 426 >UniRef50_A0RMD1 NADH-quinone oxidoreductase subunit C/D n=5 Tax=Bacteria RepID=NUOCD_CAMFF Length = 561 Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 176/510 (34%), Positives = 285/510 (55%), Gaps = 16/510 (3%) Query: 92 FSVFYHLISID-RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPN 150 FS++Y I N I + + + ++ V + ++ +ANW ERE +D FG+ F+ HPN Sbjct: 63 FSLYYIFRKISSENLCIYIDIDINQS---VKSVESIYKSANWGERECFDQFGVKFENHPN 119 Query: 151 LRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENED 210 L+RI+ + ++G+PLRKDYP + +++ DL E + + + G+ EN++ Sbjct: 120 LKRILNHKDFQGYPLRKDYP-----ITKYQVLYESDDLVGE-MKNEMQRAGLA-SEENDE 172 Query: 211 F----MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 F FLN+GP+HP+ HG R + LDGE+I+ CV +IGY HRG EK E S+ IP Sbjct: 173 FKTKYTFLNIGPSHPATHGTIRNFVALDGEKIISCVTEIGYLHRGFEKACENHSYAQIIP 232 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 YTDR+ Y +N + Y AVE+ G+ +PDR +RV+L EL RI H + + D+ Sbjct: 233 YTDRLNYCSAMLNNVGYAKAVEEALGLNLPDRGIFMRVILGELARIIDHEVCLGAMFVDM 292 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 G +T ++ + R++IY+ + +TG R ++ RIGG+A+D GW L L + K Sbjct: 293 GGLTNYWYLYNPRERIYNFLSKLTGARFTNSFARIGGMANDFYDGWKEELLAHLKDVEKG 352 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + +N I R Q + A +AL +G +G LRA+G+ FD+RK +PY Y++F Sbjct: 353 VDDTMILIEKNRIFLDRVQNICKINANDALSYGFSGPNLRASGVSFDLRKDKPYYYYDSF 412 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 DF +PVG D Y R+ ++ E+R+S+ I+ Q + +PEG D P K++ Sbjct: 413 DFSVPVGSE-GDIYDRMFVRFFEMRESISIIRQAIKLIPEGKISVDDKDVFLPSKDQVYS 471 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 +IE+LI HF + G +P + E G +++ S+ YR ++R P F L Sbjct: 472 NIESLINHFKLIFDGIKLPNGHFYSASEGANGELGFFIFSNSEPNPYRVKLRPPCFYALN 531 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + ++GSL++D I+ LGS++ + ++DR Sbjct: 532 AFSSMVQGSLIADSILNLGSLNIIAGELDR 561 >UniRef50_B2V8J2 NADH-quinone oxidoreductase subunit C/D n=15 Tax=Aquificales RepID=NUOCD_SULSY Length = 576 Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 207/596 (34%), Positives = 310/596 (52%), Gaps = 53/596 (8%) Query: 24 ELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDL----HGMDE 78 +L RFG + + GV V + +++ +E FLK+ P+ + M DL HG E Sbjct: 11 KLEERFG---YPKVSEGKGVLSVEVPKDKFIEFLTFLKEDPEYQFKMFIDLTIIDHGEKE 67 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R F L S I++K AEN+ +PT T L+ A W ERE W Sbjct: 68 NPR----------FQGVVILFSPKNQERIIVK-TWAENET-LPTLTNLWKGAKWAEREAW 115 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP---ARATEFSPFELTKAKQDLE------ 189 D+FGI F+GH NL R+++ +T+ HPLRKD+P + TE T ++LE Sbjct: 116 DMFGIKFEGHENLVRMLLWETYPYHPLRKDFPLEGIKDTELPSLNETLRGENLEGLFNYD 175 Query: 190 --------MEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDC 241 ME L + KR + LN GP HP HG + LDGE + C Sbjct: 176 RMHTALPTMEDLEITQK----KRMPVKTSQIVLNWGPLHPGTHGTIWFLFDLDGEYVKQC 231 Query: 242 VPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNV 301 IG HRG EK+GE +W +IPYTDR++Y+ YVLA EK+ GI VP++ Sbjct: 232 DIIIGQLHRGVEKLGENVNWQQFIPYTDRMDYIAAINENHAYVLAAEKMLGIEVPEKAKW 291 Query: 302 IRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRI 361 IR M++EL RINSHLL++ T+ D+GA+T + F +R+KI D++E ITG R +FRI Sbjct: 292 IRTMMAELSRINSHLLWLGTYALDLGALTMFLYTFREREKIMDIIEGITGARFTINYFRI 351 Query: 362 GGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTT 421 GGV DLP G + + +P+R+ YE +N + R++ V ++ ++G T Sbjct: 352 GGVFADLPYGALDAIEHLIKDLPQRINDYETLLTRNRVWLSRNKDVCVITEEDVYQYGLT 411 Query: 422 GAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCL 481 GA R +G+ +DVRK Y Y +F+IPVG D Y R ++++EE+RQS+RI+EQC+ Sbjct: 412 GAVARGSGVPYDVRKIDKYDAYGEVEFDIPVGEK-GDSYDRYLVRMEEMRQSIRIIEQCI 470 Query: 482 NNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINS 541 + + D P P E+ L+ G +PA E++ + +G Sbjct: 471 AKLRK--MSKDDPYFFQTPDEKKLK--------VTIDGRGMKLPAGETYASSDNPRGELG 520 Query: 542 YYLTSDGSTM-SYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +Y+ + + ++R R+R+ +F +LQ AI G ++D I L +ID V+ + DR Sbjct: 521 FYIYNKKDGLKAHRMRIRSGAFYNLQVFTKAIIGRPIADAITLLSTIDPVVGETDR 576 >UniRef50_D1C6X3 NADH dehydrogenase I, D subunit n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6X3_SPHTD Length = 410 Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 161/386 (41%), Positives = 233/386 (60%), Gaps = 2/386 (0%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M LN+GP HPS HG R+ L L+GE I C P IGY HRG EK+GE + + + P+TDR Sbjct: 26 MVLNMGPQHPSTHGVLRVRLTLEGETITACDPVIGYLHRGVEKIGESKRYAQFTPWTDRT 85 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ N + YVLAVEKL GI P+R R+++ EL RI SHL+++ T D+GA++ Sbjct: 86 DYVAAPSNNLGYVLAVEKLLGIEAPERAQYWRMIMGELARIASHLVWLGTHALDIGALSM 145 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + F +R+ I D+ E G R+ IGG + +P G ++R+FL P+R YE Sbjct: 146 SLYCFRERELILDIFEKFCGARLTTNMMEIGGFSRPIPAGLPEMIRDFLKVFPQRQREYE 205 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 N I R++GV A+ +G TGA LR +G+++DVRKA+PY Y+ DFE+P Sbjct: 206 DLLSANPIWLARTRGVGVIEPDVAINYGLTGACLRGSGVNYDVRKAQPYLLYDRIDFEVP 265 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQHIET 510 +G D Y R ++++EE+RQSL+I+EQCL+ +P +GP K PP E L E Sbjct: 266 LGTQ-GDVYDRYLVRMEEMRQSLKIIEQCLDQVPTDGPLKLAESNYVIPPHETVLTTAED 324 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 + HF+ V G P E + IE +KG YY+ SDGS + YR R+RTP F +LQ +P Sbjct: 325 MQRHFIWVIKGFSPPKGEVYMSIEHSKGELGYYIVSDGSPVPYRLRIRTPDFVNLQSLPY 384 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 G++++D++ +G+ID V+ VDR Sbjct: 385 LAEGAMLADVVALIGTIDIVLGSVDR 410 >UniRef50_B9L172 NADH dehydrogenase I, D subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L172_THERP Length = 409 Score = 323 bits (829), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 155/386 (40%), Positives = 235/386 (60%), Gaps = 2/386 (0%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + LN+GP HPS HG R+ L L+GE ++ C P IGY HRG EK+GE + ++P+TDR Sbjct: 25 LVLNMGPQHPSTHGVLRVRLTLEGETVIACDPVIGYLHRGVEKLGESHRYAQFVPWTDRT 84 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ N + YVLAVEKL GI P+R R++++EL RI SHL+++ T D+GA++ Sbjct: 85 DYVAAPSNNLGYVLAVEKLCGIQAPERAQYWRMIMAELTRIASHLVWLGTHALDIGALSV 144 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + F DR+ I D+ E G R+ IGG + ++P ++REF + PK + YE Sbjct: 145 SLYTFRDRELILDIFEKFCGARLTTNMMEIGGFSREIPPDLPEMVREFCRYFPKAIRQYE 204 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 +N I R++GV A+ +G TGA LR +G+++DVRKA PY Y+ +FE+P Sbjct: 205 DLLTENPIWLARTKGVGVIEPDVAINYGLTGACLRGSGVNYDVRKAMPYLLYDRVEFEVP 264 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQHIET 510 +G D Y R ++++EE+RQ+LRI+EQCL +P +GP A PP + + E Sbjct: 265 LGTH-GDVYDRYLVRIEEMRQALRIIEQCLEQVPTDGPLMAYESPYVIPPHKTVMTTAED 323 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 + HF+ V G P E + +E +KG YY+ SDGS + YR R+RTP F +LQ +P Sbjct: 324 MQRHFIWVIKGFSPPKGEVYHAVEHSKGELGYYIVSDGSPIPYRVRIRTPDFVNLQSLPY 383 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 +G++++D++ +G+ID V+ VDR Sbjct: 384 MAQGAMLADIVALIGTIDIVLGSVDR 409 >UniRef50_Q2S5J0 NADH-quinone oxidoreductase subunit D n=5 Tax=Bacteria RepID=NUOD_SALRD Length = 451 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 160/389 (41%), Positives = 239/389 (61%), Gaps = 2/389 (0%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E+ M LN+GP HP+ HG R V+++DGE I V DIGY HRG EK+ E +++ ++PYT Sbjct: 64 ENEMILNIGPQHPATHGVLRCVVKMDGETIEKSVLDIGYLHRGIEKLAEHKTYQEFMPYT 123 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 DR++YL N + + LAVEKLA I VP+R IR+++SEL RI+SH L++ + D GA Sbjct: 124 DRMDYLSPYSNNVAWCLAVEKLADIEVPERAQWIRMIMSELARISSHCLWLGVGMMDAGA 183 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 ++ + F +R++IY +++ + G R + RIGGVA+D ++R+F+D P R+A Sbjct: 184 VSGFVWTFQEREEIYSIMDEVAGARFTVSHSRIGGVANDFSPRAIEMIRDFVDTFPDRIA 243 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 +E +N I R++GV +EALE G TG LR +G+ +DVR+ PY Y+ DF Sbjct: 244 GWEGLLNKNRIWVERNKGVGRVTKEEALELGLTGPNLRGSGVPYDVRRFEPYLKYDEVDF 303 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 IPV DC R L+++E++QS+RI+EQCL+ M EGP ++D P KE + Sbjct: 304 TIPV-REEGDCLARYFLRLDEMKQSVRIIEQCLDRMTEGPIRSDDAKEAYPSKEEVYYSM 362 Query: 509 ETLITHFLQVSWGPVMPAN-ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 E +I F+ G V P S+ IE KG +YLTSDG+ +R R+ PSF +LQ Sbjct: 363 EGMIHDFMYTDVGTVPPKGAHSYHAIEGPKGELGFYLTSDGTGRPWRVRINAPSFTNLQA 422 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G +V+D +V +GS+D VM + D+ Sbjct: 423 MEHMLEGEMVADTVVIIGSLDPVMGEADK 451 >UniRef50_Q4P4N9 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P4N9_USTMA Length = 498 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 173/459 (37%), Positives = 251/459 (54%), Gaps = 42/459 (9%) Query: 171 ARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENED----FMFLNLGPNHPSAHGA 226 A+A SP A +E L K ++ G +D +N GP HP+AHG Sbjct: 49 AKAAPTSP-----ATSAFTVEELHDKSAHEILREGGSRKDRSLRHFTVNFGPQHPAAHGV 103 Query: 227 FRIVLQLDGEEIVD------------------------CV--PDIGYHHRGAEKMGERQS 260 R++L+L+GEEI+ C+ P +G HRG EK+ E ++ Sbjct: 104 LRLILELNGEEILRTDLAICKANIADSIQSCLFWPSGVCILQPHVGLLHRGTEKLIEYKT 163 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 320 + +PY DR++Y+ NE+ Y AVEKL I VP+R IR M E+ RI +H + + Sbjct: 164 YTQALPYFDRLDYVSMMTNELCYSRAVEKLLNIEVPERAKWIRTMFGEITRILNHCMAVL 223 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 + + DVG +TP +AF +R+K+ + E ++G R+H A+ R GGVA+DLP G LL + Sbjct: 224 SHVMDVGGLTPFLWAFEEREKLMEFYERVSGARLHAAYVRPGGVAYDLPPG---LLDDIH 280 Query: 381 DWMPK---RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 W + R+ E+ N I KGR+ G+ A+EAL++G +G LR +GI +D+RK Sbjct: 281 KWATQFGSRVDEIEEVVTGNRIWKGRTIGIGKVTAQEALDYGFSGVMLRGSGIPWDIRKV 340 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 PY Y+ +F++PVG DCY R + +VEE RQSLRI+EQCLN MP G K D Sbjct: 341 APYDAYDQVEFDVPVGKN-GDCYDRYLCRVEEFRQSLRIIEQCLNKMPAGQIKVDDHKLV 399 Query: 498 PPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV 557 PPP+ + +E+LI HF S G +P E++ IEA KG YL SDG+ YR ++ Sbjct: 400 PPPRATMKESMESLIHHFKLFSEGYAVPPGETYSAIEAPKGEMGVYLVSDGTNRPYRCKI 459 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R P FAHL R + D++ +G++D V +VDR Sbjct: 460 RAPGFAHLAGADFMARHHYIPDMVAIIGTLDLVFGEVDR 498 >UniRef50_C1XJB2 NADH dehydrogenase subunit D n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XJB2_MEIRU Length = 415 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 159/392 (40%), Positives = 242/392 (61%), Gaps = 4/392 (1%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + M LN+GP HPS HG R+V+ L GE+I+ P IGY H G EK E +++ I Y Sbjct: 25 KSEVMTLNVGPQHPSTHGVLRVVVDLSGEQILRLTPHIGYLHTGFEKNMEHRTYTQCITY 84 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 T R++YL +++ Y L+VEKL G VP R IRVML+EL RI SHL+++ T + D G Sbjct: 85 TPRMDYLHSFSHDLAYALSVEKLVGAQVPPRAQAIRVMLNELSRIASHLVFLGTGLLDFG 144 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 A+TP F+AF +R+ + DL E ++G R H + RIGG+ DLP + +++F+ MP R+ Sbjct: 145 ALTPFFYAFREREAVLDLFEWVSGQRFHHNYIRIGGLKEDLPPEFLGEVKKFIAQMPARI 204 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 YE ++ I R++GVA + A+ TG LRA+G+++DVRKA PY+GYE +D Sbjct: 205 DEYEALFRESPIFYERARGVAVIPPEVAINLSLTGGSLRASGVNYDVRKAYPYAGYETYD 264 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQC---LNNMPEGPFKADHPLTTPPPKERT 504 F++PV G D + R+++++ E+R+S++I+ Q L + GP + +P + PP+ Sbjct: 265 FDVPVLTG-GDVFDRMVIRILEMRESVKIIRQAVERLEALGPGPIRDPNPQISLPPRHLL 323 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 +E +I HF V+ G E + E+ +G YY+ SDG +M YR +VR PSF + Sbjct: 324 ETSMEAVIYHFKLVTEGFHPALGEVYVPTESARGELGYYIVSDGGSMPYRVKVRAPSFVN 383 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 LQ +P A +G ++D++V + S+D VM DVDR Sbjct: 384 LQSLPYACKGVQMADMVVVIASLDPVMGDVDR 415 >UniRef50_O75306 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial n=570 Tax=cellular organisms RepID=NDUS2_HUMAN Length = 463 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 156/383 (40%), Positives = 230/383 (60%), Gaps = 1/383 (0%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 LN GP HP+AHG R+V++L GE + C P IG HRG EK+ E +++ +PY DR++Y Sbjct: 82 LNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDY 141 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + NE Y LAVEKL I P R IRV+ E+ R+ +H++ ++T D+GAMTP F Sbjct: 142 VSMMCNEQAYSLAVEKLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFF 201 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + F +R+K+++ E ++G RMH A+ R GGV DLP G + +F RL E+ Sbjct: 202 WLFEEREKMFEFYERVSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEEL 261 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 N I + R+ + A+EAL +G +G LR +GI +D+RK +PY Y+ +F++PVG Sbjct: 262 LTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVG 321 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 DCY R + +VEE+RQSLRI+ QCLN MP G K D +PP + +E+LI Sbjct: 322 SR-GDCYDRYLCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIH 380 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 HF + G +P ++ IEA KG YL SDGS+ YR +++ P FAHL + + Sbjct: 381 HFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSK 440 Query: 574 GSLVSDLIVYLGSIDFVMSDVDR 596 G +++D++ +G+ D V +VDR Sbjct: 441 GHMLADVVAIIGTQDIVFGEVDR 463 >UniRef50_B0R3U3 NADH dehydrogenase-like complex subunit CD n=16 Tax=Halobacteriaceae RepID=B0R3U3_HALS3 Length = 562 Score = 307 bits (787), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 174/513 (33%), Positives = 276/513 (53%), Gaps = 41/513 (7%) Query: 92 FSVFYHLISIDR-NRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPN 150 F YHL D +++ + V + ++ T +F A+W+ERE +DL G+ +D HPN Sbjct: 83 FESIYHLRKYDDPTQEVSIIVPTSRDNPVSETAEPVFRTADWHEREAYDLVGVEYDDHPN 142 Query: 151 LRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENED 210 L RI++P TW+GHPL DY + F+ + K LE G ++ ++ D Sbjct: 143 LERILLPDTWQGHPLGLDYNQNKPQIVTFD--EHKNPLE-----------GHEQAADDSD 189 Query: 211 FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW-HSYIPYTD 269 MFLN+GP+HP+ HG + LDGE++ D PDIGY HR E+M ++ ++ H +PY D Sbjct: 190 TMFLNIGPHHPATHGVLHVETVLDGEQVADVNPDIGYLHRCEEQMAQKGTYRHQIMPYPD 249 Query: 270 RIEY-LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV-G 327 R +Y GG +NE Y E LA I VP+ ++R M EL RI H+L + TF D+ G Sbjct: 250 RWDYGPGGILNEWAYARTAEDLADIDVPEYAQILRTMGGELCRIACHMLALGTFCLDIYG 309 Query: 328 AMTPVF-FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL---LREFLDWM 383 T +F +A DR+ + +++E +TG RM + R+GGV D+P +R+FLD + Sbjct: 310 DFTAIFMYAMRDREVVQNILEDLTGQRMMLNYLRLGGVVWDIPEPRAEFFESVRDFLDEL 369 Query: 384 PKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 P+RL Y N I + R+ + A ++G TG R +G+D+DVR+ PY Y Sbjct: 370 PERLDEYSDLITSNEIFQARTVNTGVLDYETAKDYGVTGPVARGSGVDYDVRRDDPYGYY 429 Query: 444 ENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKER 503 D+++ G D Y+R+++++EE+ QS RI+EQC++ L P ER Sbjct: 430 PELDWDVVTEDG-GDNYSRLLVRMEEVEQSARIIEQCVD-----------LLEGWPEDER 477 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFA 563 +Q + L+ G E+++ +E KG Y+ +DG+ R ++R+P F+ Sbjct: 478 DIQ---ANVPRTLKPEAG-----TETYRTVEGAKGELGVYIRADGTEKPGRFKIRSPCFS 529 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +L + G + DL+ LGS+D ++ +VDR Sbjct: 530 NLSALKEMSTGEYIPDLVATLGSLDVILGEVDR 562 >UniRef50_Q7NI12 NAD(P)H-quinone oxidoreductase subunit H 1 n=3 Tax=cellular organisms RepID=NDHH1_GLOVI Length = 393 Score = 304 bits (778), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 153/389 (39%), Positives = 234/389 (60%), Gaps = 10/389 (2%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M +NLGP+HPS HG R+++ LDGE +VDCVP +GY HR EK+ E ++ Y+PY R Sbjct: 11 MVINLGPHHPSMHGVLRLIVTLDGENVVDCVPVLGYLHRSMEKIAESRTIIQYLPYVTRW 70 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +YL E V A E+LAG+ VP R IRV++ EL RI SHLL++ F+ D+GA +P Sbjct: 71 DYLATMFTEAITVNAPEQLAGVQVPRRARYIRVIMLELSRIASHLLWLGPFMADIGATSP 130 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 F+ F +R+ IYDL EA TG RM +FR+GGVA DLP GW R+F +++P ++ YE Sbjct: 131 FFYIFREREMIYDLFEAATGMRMMHNYFRVGGVAVDLPYGWVDKARDFCNYLPPKIDEYE 190 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + N I +GR +G+ G ++A+ WG +G LRA+G+++D+RK Y Y+ D+ + Sbjct: 191 RLITNNPIFRGRVEGLGYIGREDAINWGLSGPMLRASGVNWDLRKVDHYEIYDELDWNVA 250 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFK--ADHPLTTPPPKERTLQHIE 509 G D R +++++E+R+S++++ Q L+ +P GP++ L+ P E Sbjct: 251 WDTG-GDTLARYVVRIQEMRESVKMIRQALDQLPGGPYENLEAQRLSGGPKSEWN----- 304 Query: 510 TLITHFLQVSWGPV--MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 F+ P MP E + +EA KG YL D ST +R ++R P F +L Sbjct: 305 GFDYQFIGKKSSPTFKMPRGEHYVRVEAPKGELGVYLIGDDSTFPWRWKIRPPGFINLAV 364 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P ++G+ ++DL+ LGS+D +M +VDR Sbjct: 365 LPKLVQGTKLADLMAILGSVDIIMGEVDR 393 >UniRef50_B4SJH6 NADH-quinone oxidoreductase subunit D 1 n=211 Tax=Proteobacteria RepID=NUOD1_STRM5 Length = 436 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/421 (37%), Positives = 233/421 (55%), Gaps = 29/421 (6%) Query: 203 KRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWH 262 +R TE +++ +NLGP HP+AHG R+VL++DGE +V P +G HRG EK+ E + ++ Sbjct: 18 RRDTEIRNYV-MNLGPQHPAAHGVLRLVLEMDGETVVRADPHVGLLHRGTEKLAESKPFN 76 Query: 263 SYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF 322 I Y DR++Y+ NE YV A+E L GI P R IR M E+ RI +HL+ I T Sbjct: 77 QSIGYMDRLDYVSMMCNEHAYVRAIETLLGIEAPIRAQYIRTMFDEITRILNHLMNIGTG 136 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDR-------- 374 D+GAM + +AF +R+++ D EA++G RMH ++R GGV +LP + Sbjct: 137 ALDLGAMAVMLYAFREREELMDCYEAVSGARMHATYYRPGGVYRELPEQMPKYKESRWKT 196 Query: 375 -----------------LLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALE 417 + F P R+ YE N I K R+ G+ ++A+E Sbjct: 197 GKQLRRLNAAREGSLLDFIENFTREFPNRIDEYETLLTDNRIWKQRTVGIGVVSPQQAME 256 Query: 418 WGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRIL 477 WG TG LR +G+ +D+RK RPY+ Y+ DF+IPVG DCY R + +V E+RQS RI+ Sbjct: 257 WGMTGVMLRGSGVAWDLRKKRPYAKYDAVDFDIPVGTA-GDCYDRYLCRVAEMRQSNRII 315 Query: 478 EQCLN--NMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEA 535 QC++ GP + PP ++ +E LI HF S G +PA E++ +EA Sbjct: 316 RQCVDWLRANPGPVMLHNFKVAPPSRQEMKSDMEALIHHFKLFSEGYQVPAGETYAAVEA 375 Query: 536 TKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 KG YL SDG+ +R +R P FAHL + +RG +++D++ +G+ D V +VD Sbjct: 376 PKGEFGCYLISDGANKPFRVHLRAPGFAHLSSLDEIVRGHMLADVVAMIGTYDIVFGEVD 435 Query: 596 R 596 R Sbjct: 436 R 436 >UniRef50_A9B4Z7 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=Bacteria RepID=NUOD1_HERA2 Length = 422 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 157/408 (38%), Positives = 239/408 (58%), Gaps = 11/408 (2%) Query: 192 ALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRG 251 AL +P+E G E M L++GP HPS HG R+ ++L+GE +V PD+G+ H G Sbjct: 23 ALNNEPDENG-------EQSMVLSMGPQHPSTHGVLRLAVELNGENVVQLAPDVGFLHTG 75 Query: 252 AEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFR 311 EK E +++ I TDR++YL N M YV A+EKL VP+R +RV+L EL R Sbjct: 76 IEKTIETKTYTKSIVLTDRMDYLAPMSNNMVYVAAIEKLMQQDVPERAQTLRVLLLELTR 135 Query: 312 INSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRG 371 INSHL+++ T D+ AM+ F+A +R+ I D+ E +TG RM ++FR+GG+A D+P Sbjct: 136 INSHLVWLGTHALDLAAMSVFFYAMREREYILDIFEMLTGARMMTSYFRVGGLAWDIPAD 195 Query: 372 WDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGID 431 + + +FL ++ YE N + K R++GV A +A+ G +GA LRA+G+D Sbjct: 196 FIPTVEDFLTHFLPKVDEYEDLLTNNLLWKQRTKGVGVVNAADAIALGLSGANLRASGVD 255 Query: 432 FDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCL---NNMPEGP 488 +D+RK PYSGYE + F++PVG D Y R +V+E+R+S++I Q + M P Sbjct: 256 WDLRKTMPYSGYETYQFDVPVGQA-GDIYDRYRCRVQEMRESVKIARQAIERVKQMHGQP 314 Query: 489 FKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDG 548 + ++ PPPK +E+LI HF + G P ++ IE+ +G Y+ SDG Sbjct: 315 YVTENRKVAPPPKSEITYSMESLIHHFKLWTEGFRPPRGSAYAAIESPRGEIGCYVVSDG 374 Query: 549 STMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + +R R PSF +LQ +P +G L++DL+ + SID V+ +VDR Sbjct: 375 TPKPWRVHFRAPSFINLQALPHIAKGKLMADLVALIASIDPVLGEVDR 422 >UniRef50_C1D0H4 Putative NADH dehydrogenase (Quinone), subunit D (NADH-quinone oxidoreductase, subunit D) n=1 Tax=Deinococcus deserti VCD115 RepID=C1D0H4_DEIDV Length = 412 Score = 300 bits (769), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 152/389 (39%), Positives = 229/389 (58%), Gaps = 1/389 (0%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + + M LN+GP HPS HG R+V+ +DGE + VP +GY H G EK E +++ + Y Sbjct: 25 HTEVMSLNVGPQHPSTHGVLRLVVDMDGEYVRKVVPHMGYLHTGFEKTFEHRTYQQGVTY 84 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 R +YL +E+ YVL+VEKL VPDR ++IRV+L EL RI+SHL+++ T + D+G Sbjct: 85 APRTDYLHCFGHELAYVLSVEKLMQAQVPDRASMIRVILHELGRIHSHLVFVGTGLLDLG 144 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 A+TP F+AF +++ DL E TG+RM+ +FR+GG++ D+P W + +FLD M + + Sbjct: 145 ALTPFFYAFREKESCVDLFEEATGYRMNQGFFRVGGLSRDVPEDWPGHVAQFLDQMERGV 204 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y N I R++GV AL+ G TG LRA+G+ DVRKA PY GYE +D Sbjct: 205 DEYTNLFANNPIFLDRARGVGVIPTDVALDLGLTGPNLRASGVPLDVRKAHPYCGYEAYD 264 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F + + D R +++ E +S++I+ Q L + G K + + PP+ Sbjct: 265 FNV-ISSTDGDSLARFTMRLLEFSESIKIIRQALARLKPGLIKDPNRKISLPPRHELETS 323 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +E +I HF V+ G P E + +E +G YY+ SDG ++ YR ++R PSF +LQ Sbjct: 324 MEAVIHHFKLVTEGFHPPTGEVYVPVEGARGEVGYYIVSDGGSVPYRVKIRAPSFVNLQA 383 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + A G+ +DLI L +ID V+ DVDR Sbjct: 384 LEYACVGAQFADLITILATIDPVLGDVDR 412 >UniRef50_Q1QP34 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=cellular organisms RepID=NUOD1_NITHX Length = 396 Score = 298 bits (763), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 153/387 (39%), Positives = 226/387 (58%), Gaps = 5/387 (1%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +N GP HP+AHG R+VL+LDGE + P IG HRG EK+ E +++ +PY DR++Y Sbjct: 11 INFGPQHPAAHGVLRLVLELDGEVVRRVDPHIGLLHRGTEKLIEHKTYLQALPYFDRLDY 70 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + E + LA EKL IT+P R +IRV+ E+ R+ SHLL ++T DVGA+TP Sbjct: 71 VAPMNQEHAFCLATEKLLNITIPKRGQLIRVLYCEIGRLLSHLLNVTTQAMDVGALTPPL 130 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + F +R+K+ E +G RMH +FR+GGV DLP + +F D K E Sbjct: 131 WGFEEREKLMVFYERASGARMHANYFRVGGVHQDLPSKLLDDIWDFCDPFLKVCDDLEGL 190 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 +N I K R+ G+A +A WG +G +R +G +D+RKA+PY Y DF+IP+G Sbjct: 191 LTENRIFKQRNVGIAEVKLADAWGWGFSGVMVRGSGAAWDLRKAQPYECYSELDFDIPIG 250 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNN--MPE--GPFKADHPLTTPPPKERTLQHIE 509 DCY R ++++EE+RQS+RI++QCL +PE GP PP + + +E Sbjct: 251 KH-GDCYDRYLVRMEEMRQSVRIMKQCLEKLRLPEGQGPVATRDHKIVPPSRAEMKRSME 309 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 +I HF + G +PA E + +EA KG YL SDG+ Y+ ++R PSFAHL + Sbjct: 310 AMIEHFKLYTEGHRVPAGEVYVAVEAPKGEFGVYLVSDGTNQPYKCKIRAPSFAHLSAMD 369 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 RG +++D+ +GS+D V ++DR Sbjct: 370 FLTRGHMLADVSAIIGSLDIVFGEIDR 396 >UniRef50_Q2JFL7 NADH-quinone oxidoreductase subunit D n=81 Tax=Bacteria RepID=NUOD_FRASC Length = 482 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 163/410 (39%), Positives = 239/410 (58%), Gaps = 19/410 (4%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 G E + + +N+GP HPS HG R+VL+++GE + + IGY H G EK E ++W Sbjct: 74 GEEENERIVVNMGPQHPSTHGVLRLVLEIEGETVTETRLVIGYLHTGIEKSCEYRTWTQA 133 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRINSHLLYISTF 322 + + R +YL NE Y L+VE+L GIT VP+R VIRVM+ EL RI SHL++++T Sbjct: 134 VTFLTRADYLSPLFNEAAYCLSVERLLGITEQVPERATVIRVMVMELQRIASHLVWLATG 193 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDW 382 ++GA T + F F +R+K+ DL+E ITG RM+ A+ R GG+A DLP G +R +R FL Sbjct: 194 GMELGATTAMIFGFREREKVLDLLELITGLRMNHAYIRPGGLAQDLPDGAERAIRAFLAD 253 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 MPKR+ Y + K R V A + GTTG LRA G+ +D+RK PY G Sbjct: 254 MPKRIREYHALLTGQPVWKARMVDVNVLDAAGCIALGTTGPVLRAAGLPWDLRKTMPYCG 313 Query: 443 YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFK-ADHPLTTPPP- 500 YE ++F++P D + R ++++EE+ +SL+I++QCL+ + GP AD + P Sbjct: 314 YETYEFDVPT-ALEGDSFARYLVRLEEMGESLKIVDQCLDRLRPGPVMVADKKIAWPSQL 372 Query: 501 ------KERTLQHI--------ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS 546 +L +I E LI HF V+ G +PA + + IE+ +G Y++ S Sbjct: 373 SVGSDGTGNSLAYIRKIMGTSMEALIHHFKLVTEGFRVPAGQVYTQIESPRGELGYHVVS 432 Query: 547 DGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 DG T +R VR PSF +LQ +PA G V+D+IV + S+D V+ VDR Sbjct: 433 DGGTRPFRVHVRDPSFVNLQAVPALTEGGQVADVIVGVASVDPVLGGVDR 482 >UniRef50_B5YL34 NADH-quinone oxidoreductase subunit D 2 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=NUOD2_THEYD Length = 401 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 147/387 (37%), Positives = 229/387 (59%), Gaps = 5/387 (1%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 L +GP+HP+ HG +++ + +GE +++ PD+GY HRG EK+ E +++ + TDR++Y Sbjct: 16 LQMGPHHPATHGVLKLLCEFEGERVINIKPDVGYLHRGVEKLSESKTYPGAMTLTDRLDY 75 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + N + Y LAVE+L GI P R IR M+SE+ R++SHLL+++T D+GAMT Sbjct: 76 ISSMTNNIGYCLAVERLMGIEPPPRAKFIRTMVSEMTRLSSHLLWLATHALDIGAMTVFL 135 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 +AF +R++I E I G R+ ++ RIGGV D+ + +F+D M R+ YE Sbjct: 136 YAFREREQILQFFEKICGARLTVSYPRIGGVRVDIKEHVLDEIYKFMDLMLIRVDEYETL 195 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 +N I R++GV ++A+ G TG LR +G+ +D+RK PY Y DFE+P+G Sbjct: 196 LTENRIWIARTRGVGVIAPEDAVLLGLTGPALRGSGVYYDIRKQIPYDAYSEIDFEVPLG 255 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHP--LTTPPPKERTLQHIETL 511 D Y R + ++ E+RQS+ I++QC+ MPEG +D + P +R ++ ++L Sbjct: 256 EK-GDTYDRYLCRIREMRQSVLIVKQCIEKMPEGKILSDKSPDIDLPHQAKRKIEPGDSL 314 Query: 512 ITHFLQVS--WGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 F+ S +MP E + IEA KG +Y+ SDGS YR RVR PSF H+ IP Sbjct: 315 WNGFIAFSEEKQEIMPKGEIYSAIEAPKGELGFYIVSDGSGRPYRMRVRAPSFIHISAIP 374 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G L++D+I +G++D VM + DR Sbjct: 375 KLCEGHLLADVIAIIGTLDIVMGEADR 401 >UniRef50_Q2RJU4 NADH-quinone oxidoreductase subunit D n=94 Tax=Firmicutes RepID=NUOD_MOOTA Length = 371 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 153/383 (39%), Positives = 221/383 (57%), Gaps = 26/383 (6%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 LN+GP HPS HG +R +L LDGE++V IGY HRG EK+ E +++ IPYTDR++Y Sbjct: 15 LNMGPQHPSTHGVYRALLTLDGEKVVGVENIIGYLHRGIEKLAEDRTYTQVIPYTDRLDY 74 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 L G +N + YV VEKL G+ VP+R +RV+++EL R+ SH++ +++ D+ T F Sbjct: 75 LAGMLNNLGYVQTVEKLLGLEVPERAEYLRVIMAELSRLASHMVMVASMALDLSGWTAWF 134 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 F +R++I DL E G R+ ++ RIGGVA D+P G+ L FL+ +P+ +A Sbjct: 135 PPFRERERILDLFEMTCGSRLTVSYMRIGGVAADIPPGFLPALESFLNDLPRMIAEMNGL 194 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 N I K R QGV + AL +G TG LRA G+ FD+RKARPYS Y+ FDF+IP Sbjct: 195 ITGNEIFKARCQGVGKIDLETALAYGITGPNLRACGLPFDLRKARPYSIYDRFDFDIPTL 254 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D Y R ++++ E+ QS RI+ Q + +P+GP +A P R L+ Sbjct: 255 NN-GDSYDRFVIRLLEMEQSARIIRQAMEQLPDGPVQAKVP--------RVLK------- 298 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 +P E + IE KGI +YL SDG + YR + +PSF +L +P Sbjct: 299 ----------LPRGEVYHQIEGAKGILGFYLVSDGGSKPYRLHIHSPSFVNLGALPRISV 348 Query: 574 GSLVSDLIVYLGSIDFVMSDVDR 596 G + D +V + SID V+ +VDR Sbjct: 349 GGTIQDFVVNIASIDIVLGEVDR 371 >UniRef50_B1W516 NADH-quinone oxidoreductase subunit D 1 n=24 Tax=Actinomycetales RepID=NUOD1_STRGG Length = 440 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 165/407 (40%), Positives = 231/407 (56%), Gaps = 19/407 (4%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 +++ + +N+GP HPS HG R++L++DGE + + IGY H G EK E ++W + Sbjct: 35 DDERIIVNMGPQHPSTHGVLRLILEIDGETVTEARCGIGYLHTGIEKNLEFRNWTQGTTF 94 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGI--TVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 R++YL NE Y L VEKL GI +PDR V+RV+L EL R++SHL+ I+T + Sbjct: 95 VTRMDYLTPFFNETAYCLGVEKLLGIEDQIPDRATVLRVLLMELNRLSSHLVCIATGGME 154 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 +GA T + + F DR+ + DL E TG RM+ A+ R GG+A DLP G LREF+ M K Sbjct: 155 LGATTIMIYGFRDRELVLDLFELFTGLRMNHAFVRPGGLAQDLPPGAVDRLREFIKTMKK 214 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 L Y+K A N I K R Q V + G TG LR+ G+ D+RK+ PY GYE Sbjct: 215 NLPEYDKLATGNPIFKARMQDVGYLDLTGCMALGATGPVLRSAGLPHDLRKSDPYCGYET 274 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFK-ADHPLT-------T 497 +DFE+P D Y R ++++EE+RQSLRI+EQC++ + GP AD + Sbjct: 275 YDFEVPT-ADTCDSYGRFLIRLEEMRQSLRIIEQCIDRLEPGPVMVADKKIAWPAQLALG 333 Query: 498 PPPKERTLQHI--------ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS 549 P +L HI E LI HF V+ G +P + + +E+ KG ++ SDG Sbjct: 334 PDGLGNSLDHIRNIMGTSMEALIHHFKLVTEGFRVPPGQVYTAVESPKGELGVHVVSDGG 393 Query: 550 TMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 T YR R PSF +LQ + A G V+D+IV + SID VM VDR Sbjct: 394 TRPYRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVASIDPVMGGVDR 440 >UniRef50_Q67P19 NADH-quinone oxidoreductase subunit D 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOD1_SYMTH Length = 404 Score = 295 bits (754), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 155/389 (39%), Positives = 233/389 (59%), Gaps = 5/389 (1%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M L++GP+HP+ HG R+ L+L+GE +V P+ G+ H G EK E +W+ DR+ Sbjct: 17 MTLSIGPHHPATHGVLRVKLELEGETVVKAEPETGFLHTGIEKTAEHLTWNQATTVMDRM 76 Query: 272 EYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 +YL N YV+AVEKL GI +P++ V RV+L EL R+ SHL+ + T D G + Sbjct: 77 DYLSPISNNTGYVMAVEKLLGIEDRIPEKARVTRVILLELNRVASHLVGLGTGGLDYGNI 136 Query: 330 -TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 TP+F+AF R +I D+ E TG RM+P++ R+GG+A+DLP + ++ +FL P R+ Sbjct: 137 GTPIFWAFELRDRILDIFEHTTGQRMNPSYMRVGGLAYDLPHNFKEMVEDFLKVAPGRIQ 196 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 + L N I R++GV+ ++AL +G TG LR TG D+DVRK PY GYEN+DF Sbjct: 197 ELKDVMLHNPIFVDRAKGVSVITYEQALRYGLTGRNLRVTGSDYDVRKYYPYLGYENYDF 256 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQH 507 ++PV D ++RV + +E+ +SL+I+ Q L+N+P + + D PPK+ Sbjct: 257 KVPVYTD-GDSWSRVAITFDEMFESLKIIRQALDNLPWDDRYIIDDRKLVLPPKQEVKHS 315 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +E LI HF V G +PA E + IE+ +G +Y+ SDG R RVR PSF + Sbjct: 316 MEALIHHFKLVHHGFDVPAGEVYVSIESPRGEIGFYVVSDGGNKPMRVRVRPPSFYAVYS 375 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P + G L+SD++ + +ID V +VDR Sbjct: 376 LPVLLEGHLLSDMVGAIATIDPVFGEVDR 404 >UniRef50_B5YKI5 NADH-quinone oxidoreductase subunit D 1 n=12 Tax=Bacteria RepID=NUOD1_THEYD Length = 397 Score = 294 bits (753), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 152/394 (38%), Positives = 231/394 (58%), Gaps = 20/394 (5%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +N+GP HP+ HG R+VL+L+GE I C+P IGY HRG EK+ E ++ +P TDR++Y Sbjct: 13 VNMGPQHPATHGVLRLVLELEGEVIKKCIPYIGYLHRGVEKLSEDLTYVQSLPITDRMDY 72 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 L VN + + +AVEKL GI +P+R IR ++ E+ RI SHL++I+T D+GAMT Sbjct: 73 LSSMVNNVGFCVAVEKLMGIQIPERAKFIRTIMGEMARICSHLVWIATHALDIGAMTVFL 132 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 +A DR+ + +L E +TG R+ ++ R+GGV D+ + +F++ P+++ YE Sbjct: 133 YAMRDREYLLELFEMVTGARLTVSYPRVGGVRCDVNNEFLDKTYKFIEEFPRKVEEYETL 192 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 +N + R++GV A+EA+ WG TG LR +G+ +DVRK PY Y+ DFE+P+G Sbjct: 193 IDRNRVWLKRTKGVGVISAEEAINWGLTGPTLRGSGVYYDVRKFFPYDAYDKVDFEVPLG 252 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ------- 506 D Y R ++ E RQS +I++QC+ +P+G A++ L P E L+ Sbjct: 253 KN-GDIYDRYKCRMLEFRQSAKIIKQCIERLPDGSILAENALRIRMP-ESPLKIDKKDII 310 Query: 507 ---HIE-TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSF 562 +IE I F+Q E + +EA +G +Y+ D S+ YR RVR PSF Sbjct: 311 FDVYIEDKQIQEFIQ-------KFTEVYASVEAPRGELGFYIVCDNSSKPYRMRVRAPSF 363 Query: 563 AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 H +P GSLV+D+I +GSID V+ + DR Sbjct: 364 VHAGVLPKLCEGSLVADVIANIGSIDIVLGECDR 397 >UniRef50_Q6MDR3 NADH-quinone oxidoreductase subunit D n=2 Tax=Parachlamydiaceae RepID=NUOD_PARUW Length = 402 Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 149/397 (37%), Positives = 233/397 (58%), Gaps = 5/397 (1%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 +K E+ D M LNLGP HPS HG R+ L+L+GE ++ C P IGY H G EK E +++ Sbjct: 9 LKELEESGDVMELNLGPQHPSTHGVLRLKLRLEGEVVLSCDPVIGYLHTGVEKECESRTY 68 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 H DR++YL G E + A+E+L I VP+R IR++L EL RI SHLL+ T Sbjct: 69 HQVFTLVDRLDYLSGPAEEQAFAGALERLMNIEVPERAQTIRIILLELSRIASHLLWAGT 128 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 ++ + ++F +R+KI DL E ++G RM P+ +RIGG+A DL + L+EF+ Sbjct: 129 SALELNMSSVFMYSFAEREKILDLFEQVSGARMFPSLWRIGGLAKDLNSDFISHLKEFIS 188 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 K ++ N + R QGVA + ++ TG LRA+GI +D+RKA PY Sbjct: 189 GFQKIWKELDRLLTDNFVWCKRLQGVAVIDQEICKQYMCTGPVLRASGISYDIRKAYPYL 248 Query: 442 GYENFDFEIP--VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 GYEN++F+IP + G D Y R ++++EE+ QS+ I+EQ + + G + P Sbjct: 249 GYENYNFDIPTHIDG---DSYARYLVRMEEMLQSISIIEQAIARLKPGVVLTNDRKVALP 305 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 P++ + +E +I F +S G P + +E+ +G +Y+ SDG+ YR RVR+ Sbjct: 306 PRKELARSMEAVIHQFKLISEGLHPPVGSVYNCVESARGELGHYVISDGTPKPYRLRVRS 365 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PSF+H++ + +RG ++SD++V + S+D ++ DVDR Sbjct: 366 PSFSHVEVLKKVLRGHVISDVVVAIASVDPILGDVDR 402 >UniRef50_Q1IS59 NADH-quinone oxidoreductase subunit D 1 n=2 Tax=Acidobacteria RepID=NUOD1_ACIBL Length = 381 Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 144/395 (36%), Positives = 226/395 (57%), Gaps = 31/395 (7%) Query: 207 ENEDFM-----FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 EN+ F+ LN+GP HPS HG R++L+LDGE ++ IGY HRG EK+ E +++ Sbjct: 13 ENKTFLDSNELVLNMGPQHPSTHGVLRVILKLDGERVLGTECVIGYLHRGVEKIAENRTY 72 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 + PY DR++Y+ N + Y AVEKL + P R +RV+L+EL R+ SH++++ T Sbjct: 73 VQFNPYVDRMDYVAAVSNGLGYCEAVEKLIDVQAPPRAQFLRVILTELNRLASHMVWLGT 132 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 D+GA+TP+F+ F DR+++ + E G R+ FRIGG ++ G+++ + ++ D Sbjct: 133 HALDIGALTPLFYTFRDREEVLKIFEKYCGARLTTHAFRIGGCIYEAYEGFEKDVLDYCD 192 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + R+ YE N I R++G+ A + G TG LRA G+ +D+RKA+PY+ Sbjct: 193 KLGPRIDEYEGLLTGNRIWLQRTKGIGILNAADCKALGVTGPVLRAAGVKWDLRKAQPYA 252 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y+ DF++P G D + R M++++E+RQS+RIL Q + +P GP A P PP Sbjct: 253 AYDQVDFDVPTGEN-GDTFDRYMVRMQEMRQSIRILRQAVEKLPAGPTMAKVPKVLKPPV 311 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 R + IEA KG Y++ SDGS YR RVR PS Sbjct: 312 GRI-------------------------YHSIEAPKGELGYFIVSDGSLQPYRVRVRPPS 346 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +LQ + +RG+L++D++ +G++D V+ +VDR Sbjct: 347 FVNLQALDKMVRGALIADVVAVIGTLDIVLGEVDR 381 >UniRef50_A5UXK3 NADH-quinone oxidoreductase subunit D 1 n=20 Tax=cellular organisms RepID=NUOD1_ROSS1 Length = 374 Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 153/384 (39%), Positives = 221/384 (57%), Gaps = 19/384 (4%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +N+GP HPS HG FR+++ +DGE IVD P GY HR E++ E ++ +PYTDR++Y Sbjct: 9 INIGPQHPSTHGVFRMIVTVDGETIVDLKPVFGYLHRNHEQLAEVSTYIQSMPYTDRLDY 68 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA-MTPV 332 N LAVEKLAGI+VP R IRV++ EL RI +H + + D+GA TP+ Sbjct: 69 FNSMANNHALALAVEKLAGISVPQRAEYIRVLMVELTRILNHASAVGFLLNDMGAWQTPL 128 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 F +R+KI DL E +G RM +FR GGV DLP + L+E + +P +E+ Sbjct: 129 MFGMREREKILDLFEMASGARMMCNYFRFGGVWRDLPPEFIPQLKELMQGLPSFFDEFER 188 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 +N IL R+ V + A+ + TG LRA+GI +DVR+A PYS Y+ DF+IP+ Sbjct: 189 LLKENEILLSRTINVGVLPKEVAVSYSVTGPVLRASGIPYDVRRAEPYSVYDELDFDIPI 248 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 G V D Y R ++++EE+RQS RIL+Q + +P+ +P K++ L+ Sbjct: 249 -GSVGDVYDRFLIRIEEMRQSYRILQQVIERLPDTTGGHINPAMANIGKQKALRP----- 302 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 P +++ IE+ KG +YL SDGS YR +VR PSF +L + Sbjct: 303 ------------PPGDAYARIESPKGELGFYLVSDGSERPYRYKVRAPSFINLTPLGDMC 350 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 RG V+D++V LGSID VM +VD+ Sbjct: 351 RGHKVADVVVILGSIDIVMGEVDK 374 >UniRef50_P56753 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic n=201 Tax=cellular organisms RepID=NDHH_ARATH Length = 393 Score = 288 bits (737), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 150/397 (37%), Positives = 226/397 (56%), Gaps = 6/397 (1%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 MKR +D M +N+GP+HPS HG R+++ LDGE++VDC P +GY HRG EK+ E ++ Sbjct: 1 MKRPVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAI 60 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 Y+PY R +YL E V E+L I VP R + IRV++ EL RI SHLL++ Sbjct: 61 IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP 120 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 F+ D+GA TP F+ F +R+ +YDL EA TG RM +FRIGG+A DLP GW +F D Sbjct: 121 FMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCD 180 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + + Y+K +N I R +GV G +EA+ WG +G LRA+GI +D+RK Y Sbjct: 181 YFLTEVVEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRKIDRYE 240 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y+ F++EI D R ++++ E+ +S++I++Q L +P GP++ + Sbjct: 241 SYDEFEWEIQWQKQ-GDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFDRKR 299 Query: 502 ERTLQHIETLITHFLQVSWGPV--MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 E F+ P + E + +EA KG +L D S +R ++R Sbjct: 300 NPEWNDFE---YRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRP 356 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 P F +LQ +P ++ ++D++ LGSID +M +VDR Sbjct: 357 PGFINLQILPELVKRMKLADIMTILGSIDIIMGEVDR 393 >UniRef50_C9LCY9 NADH dehydrogenase I, C/D subunit n=9 Tax=Bacteroidales RepID=C9LCY9_9BACT Length = 558 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 177/550 (32%), Positives = 277/550 (50%), Gaps = 56/550 (10%) Query: 67 YVMLFDLHGMDERLRTHR-----EGLPAAD-----FSVFYHLISIDRNRDIMLKVALAEN 116 Y+ DLH +RL+ E L D V Y+L S +N+ I LK A + Sbjct: 45 YLAPEDLHAEMQRLKDEEHFDFLETLTGMDWGEDGLGVVYNLWSTTQNKRISLKTATTDR 104 Query: 117 DL-HVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATE 175 + +PT + L+ AN YERE +D FGI F GHP++RRI + + W G+P+RKD + E Sbjct: 105 ENPFLPTVSDLWNIANIYEREVFDFFGIKFLGHPDMRRIFLREDWNGYPMRKD--DKPEE 162 Query: 176 FSPFELTKAKQDLEMEALTFKPEEWGMKRGT----EN----EDFMFLNLGPNHPSAHGAF 227 +P + + E L ++ G+ EN ED +N+GP HPS HG Sbjct: 163 ENPLRM-------DNEPLADVTTQYDRPDGSITTKENTIFTEDDYVVNIGPQHPSTHGVL 215 Query: 228 RIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAV 287 + L+GE I P +GY HRG EK+ E ++ + T+R++YLG N + + Sbjct: 216 HFRVALEGERIRKIDPILGYIHRGIEKLNESLTYPQTLALTERLDYLGAMQNRHALCMCI 275 Query: 288 EKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVE 347 EK AGI V +RV IR ++ E RI+SH+L+ S QD+GA + + F DR++I D+ E Sbjct: 276 EKAAGIEVSERVQYIRTIMDEFQRIDSHILFFSCLCQDMGATSAFLYGFRDREQILDIFE 335 Query: 348 AITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGV 407 G R+ + IGGV D+ + R ++EF+ +M L Y + N I R +GV Sbjct: 336 ETCGGRLILNYNTIGGVMADIHPNFVRRVKEFIPYMRHNLQEYYDIFVNNVIAHNRLEGV 395 Query: 408 AAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF-EIPVGGGVSDCYTRVMLK 466 ++ + +G TG RA G D+RK +PY+ Y+ DF EI G D + R+M++ Sbjct: 396 GVLNKEQVISFGCTGGTGRAAGWSNDLRKHQPYAAYDKVDFQEITYTEG--DSFARLMVR 453 Query: 467 VEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPA 526 ++E+ +SL+I+EQ ++ +PEGPF+ T P K +PA Sbjct: 454 MKEIEESLKIIEQLIDGIPEGPFQTK---TKPIIK----------------------IPA 488 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 + +E ++G L S G R R+ + + R + ++DL+ G+ Sbjct: 489 GTYYSAVEGSRGEFGVLLESKGDKFPSRLHYRSTGLPLVAAMDTICRDNFIADLMAIGGT 548 Query: 587 IDFVMSDVDR 596 +D+V+ D+DR Sbjct: 549 VDYVVPDIDR 558 >UniRef50_D2R5G7 NADH dehydrogenase (Quinone) n=2 Tax=Planctomycetaceae RepID=D2R5G7_9PLAN Length = 404 Score = 284 bits (727), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 148/394 (37%), Positives = 220/394 (55%), Gaps = 5/394 (1%) Query: 207 ENEDFMF-LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 ++ED+++ LN GP HP+ H R+VL+LDGE +VD VPDIGY H G EK+GE ++ Y+ Sbjct: 12 KSEDYLWTLNFGPQHPATHTTLRLVLKLDGERVVDAVPDIGYLHSGFEKIGEHLDFNQYV 71 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 TDR+ Y+ N + + AVEKL GI + R IR ++ EL RI+ HLL D Sbjct: 72 TVTDRMNYISPMANNVAWHGAVEKLMGIEITPRCKYIRTIICELARISDHLLSTGAMGLD 131 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 GA T +AF R++IYD+ E + G R ++ R+GG++ D+ +R+FL P+ Sbjct: 132 TGAFTFFLYAFYQRERIYDIFETLCGARFTNSYTRVGGLSQDMTPLVIEKIRDFLRTFPQ 191 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 + E+ +N I R +GV + A TG RA+G+ D+RK PY Y + Sbjct: 192 TIDDMERLVNRNRIFVDRMKGVGLLSKERATNMSATGPVARASGVTRDLRKDEPYLAYGD 251 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD-HPLTTPPPKERT 504 DF++ DC+ R +++ E+R+SL+I+ Q L N+P GP P K Sbjct: 252 LDFQVCCATA-GDCFARYYVRMAEMRESLKIVAQALENLPAGPVNVGMDDRAALPSKAEV 310 Query: 505 LQHIETLITHF--LQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSF 562 Q IE ITHF + ++ G +P E + IEA G +YL DGS ++YR R R PSF Sbjct: 311 YQTIEGTITHFELVMLNRGFTVPNEEVYSAIEAPNGELGFYLVGDGSDVAYRARCRPPSF 370 Query: 563 AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 H P IRG +SD++ LGS++ + +++DR Sbjct: 371 IHFSLFPELIRGHTLSDVVAVLGSLNIIAAELDR 404 >UniRef50_C0Z770 NADH-quinone oxidoreductase chain D n=2 Tax=Bacillales RepID=C0Z770_BREBN Length = 382 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 145/385 (37%), Positives = 214/385 (55%), Gaps = 27/385 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M LN+GP HPS HG FR+V+++DGE I + +P +GY HRG EK+ E ++ IPYTDR+ Sbjct: 23 MLLNVGPQHPSTHGVFRLVVKIDGETIKEAIPVMGYLHRGTEKLAENLTYTQIIPYTDRM 82 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ N AVE + G+ +P+R +R++ EL R+ SHL++ TF+ D+GAM P Sbjct: 83 DYVSAMTNNYVLCHAVETMMGLEIPERAQFLRLIAMELNRVASHLVWWGTFLLDIGAMGP 142 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +AF DR+ I DL + G RM + R+GGV D P GW +EF+ +M K L +Y Sbjct: 143 FLYAFRDRETILDLFNELCGARMTFNYMRVGGVKWDAPPGWVDKAKEFVQYMKKELNNYH 202 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + N I R G+ + K AL++ +G LR+TG+ +D+RK PY Y+ F+F++P Sbjct: 203 QLVTGNEIFINRLIGIGKFDTKTALDYSLSGVMLRSTGVKWDLRKDEPYCIYDRFEFDVP 262 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQHIET 510 DC R L++ E+ QSLRILEQ L P EG P P Sbjct: 263 TATE-GDCMARYHLRMAEIEQSLRILEQALEQFPSEGEVMGKVPRVIRP----------- 310 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 PA E++ IE+ +G Y+ S G +R + R PSF +LQ +P Sbjct: 311 --------------PAGETYVRIESPRGEIGCYIASQGKDKPWRLKFRRPSFTNLQILPK 356 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVD 595 ++G +S+++ LGSID V+ +VD Sbjct: 357 LLQGENLSNMVAILGSIDIVLGEVD 381 >UniRef50_C6X0Z4 NADH-ubiquinone oxidoreductase chain D n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0Z4_FLAB3 Length = 420 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 148/382 (38%), Positives = 212/382 (55%), Gaps = 1/382 (0%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 LNLGP HP+ HG F+ VL +DGE I+ IGY HR EK+ ER+++ TDR+ Y Sbjct: 39 LNLGPTHPATHGIFQNVLTMDGERILHSEQTIGYIHRAYEKISERRNFTQITTLTDRMNY 98 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 +N + + L VEKL G VP RV+ +RV++ EL RI H++ D GA+T + Sbjct: 99 CSAPINNIGWHLTVEKLIGCEVPKRVDYMRVIMMELARIADHMVCNGVIAMDAGAITGLT 158 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + F +R+KIY++ E + G RM RIGG D + LL+ +L PK + + Sbjct: 159 YLFQEREKIYEMYEQVCGARMTTNMGRIGGFERDFNDKFHELLQTWLKRFPKIWSEFCAL 218 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 +N I R+ V A+ AL +G TG LRA G+D+DVR A PYS Y +FDF IPVG Sbjct: 219 NERNRIFMDRTINVGPISAERALSYGFTGPNLRAAGVDYDVRVASPYSSYNDFDFIIPVG 278 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D Y R M++ +E+ +SL+I+ Q N+P+GPF AD P P K ++E LI Sbjct: 279 SA-GDTYDRFMVRQQEVWESLKIINQAYKNLPDGPFHADVPEFYLPEKADVYNNMEALIY 337 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 HF V +P E + +E G +YL SDG YR R P F + Q P I+ Sbjct: 338 HFKIVMGETDVPIGEVYNCVEGGNGELGFYLVSDGGRTPYRLHFRRPCFIYYQAYPEMIK 397 Query: 574 GSLVSDLIVYLGSIDFVMSDVD 595 G ++SD +V + S++ + ++D Sbjct: 398 GGMISDAVVTMCSMNVIAGELD 419 >UniRef50_C9LVK3 Proton-translocating NADH-quinone oxidoreductase, D subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVK3_9FIRM Length = 365 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 146/383 (38%), Positives = 219/383 (57%), Gaps = 26/383 (6%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 LN+GP HPS HG ++ L+L GE I P +GY HRG EK+ E +++ +PYTD+++ Sbjct: 8 ILNMGPQHPSTHGVLQVELELSGERIERAKPILGYLHRGIEKLMESRTYAQCLPYTDKLD 67 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y+ N + + AVEKLAGI VP R +RV+ +EL RI SHL++I T + D+GA T Sbjct: 68 YVSSMNNNLAWCTAVEKLAGIRVPLRAEYLRVIAAELNRIASHLVFIGTLLNDLGAATAF 127 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 +AF DR+K+ DL + I G RM ++ R+GGVA D + + FLD++P+ L Y+ Sbjct: 128 VYAFRDREKVLDLFDLICGARMSTSYIRLGGVAFDATEEFIEKTQAFLDYVPEMLEEYDN 187 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 N I R +GV+ A+EA +GA LRATG+ +D+R+ PYS Y+ DFE+PV Sbjct: 188 LITGNEIFYARMKGVSPMTAEEAKALSLSGANLRATGVAYDIRRVEPYSVYDRLDFEVPV 247 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 G + D + R ++++E+ +S +I+ Q L MPEG + PPK Sbjct: 248 -GTLGDDWDRYEVRLKEIGESAKIIRQALKEMPEGSCRKVVSPNLRPPK----------- 295 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 G V + +E T+G +Y+ SDG+ YR +R PSF +LQ + Sbjct: 296 --------GSV------YHRVENTRGELGFYIVSDGTAKPYRVHIRRPSFVNLQALDPLC 341 Query: 573 RGSLVSDLIVYLGSIDFVMSDVD 595 RG+LV+D +V ++D +M +VD Sbjct: 342 RGTLVADSVVVYSTLDPLMGEVD 364 >UniRef50_UPI0001C31275 NADH dehydrogenase I, D subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31275 Length = 413 Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 152/406 (37%), Positives = 229/406 (56%), Gaps = 4/406 (0%) Query: 191 EALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHR 250 E++++ E GM G E E M +N+GP+HPS HG R++L L+GE + D P IGY H Sbjct: 12 ESISYSAEPAGM--GLEQE-LMTVNMGPHHPSTHGVLRLILTLEGEMVRDVKPIIGYVHT 68 Query: 251 GAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELF 310 G EK E++++ IP +R++YL N + AVEKL + VP R +RV+ EL Sbjct: 69 GIEKTAEQKAYWKVIPVVERMDYLSYYFNAYAFCGAVEKLLEVDVPKRAQYLRVIHMELN 128 Query: 311 RINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPR 370 RI SHL+++ T D+GA+ ++ F +R+++ DL E +G RMH +F++GGV D+PR Sbjct: 129 RIMSHLVWLGTSCIDLGAIGVWWYCFREREQVLDLFEMSSGQRMHTRYFQVGGVIEDIPR 188 Query: 371 GWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI 430 GW ++ F M +R Y +N I R + + L G TG LRATG Sbjct: 189 GWTERVKRFTKTMRERSEQYSALLDRNEIFLQRMRHTGTVDEETLLGLGVTGPLLRATGN 248 Query: 431 DFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFK 490 +D+RKA PY Y++F F IPVG D Y R ++ E+ +S I++Q ++ +PEGPF Sbjct: 249 PWDLRKAAPYCSYDDFRFRIPVGTE-GDNYDRYRVRHAEILESCAIIDQAIDGLPEGPFI 307 Query: 491 ADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST 550 + PP+ +E LI HF V+ G +P E + IE+ +G ++ SDGS+ Sbjct: 308 TEDRKVALPPRHELATSMEALIHHFKLVTEGFRVPPGEVYHPIESPRGELGCFVRSDGSS 367 Query: 551 MSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R +R PSF +LQ AA R + ++DL+ L +D ++ VDR Sbjct: 368 KPARVHMRDPSFVNLQATAAATRDTYIADLVATLAMLDPILGGVDR 413 >UniRef50_A9G9T3 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=Myxococcales RepID=NUOD2_SORC5 Length = 388 Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 150/411 (36%), Positives = 220/411 (53%), Gaps = 27/411 (6%) Query: 190 MEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHH 249 M + F + G + G E +D M LN+GP+HPS HG R V+ DGE I VPD+GY H Sbjct: 1 MSQVIFSVDRGGAEPGAEMDDEMTLNMGPHHPSTHGVLRFVISTDGEIIRKAVPDVGYLH 60 Query: 250 RGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSEL 309 R EK+GER ++ ++PYTDR++Y+ + A EKL GI VP R +RV+ EL Sbjct: 61 RSIEKIGERCTYSGFMPYTDRVDYIAAMFANEAWASACEKLMGIEVPKRAQYLRVISCEL 120 Query: 310 FRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP 369 RI SH++ + DVGA+TP +A +R+ I D +E + G R+ + RIGGV+ D+P Sbjct: 121 NRIGSHMIALGAMAMDVGAVTPFPWALREREYINDFIEELCGARLTFNYHRIGGVSFDMP 180 Query: 370 RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATG 429 +GW ++ +LD + +++ N I R VA A+EA +WG G LR +G Sbjct: 181 KGWADKVKHWLDRFEPIMVEFDRLISLNDIFIKRLANVAVVTAEEAKDWGLVGPNLRGSG 240 Query: 430 IDFDVRKARPYSGYENFDFEIPVG----GGVSDCYTRVMLKVEELRQSLRILEQCLNNMP 485 + +D+RK YS Y +F++PVG G V DC+ R ++VEE R+S +IL Q L+ + Sbjct: 241 VKWDLRKEDAYSVYPELEFDVPVGRGRYGTVGDCWDRFYVRVEECRESAKILRQALDKID 300 Query: 486 EGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT 545 E P D L P K R P E++ IE+ +G Y+ Sbjct: 301 EHP--EDDILGKLPKKMR---------------------PDGEAYARIESARGDMGCYVI 337 Query: 546 SDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G+ +YR R RT SF + I A G ++DL+ + S D V ++DR Sbjct: 338 GRGAEEAYRARFRTGSFTAMAMIEAKSPGLFLADLVALIASFDVVAPEIDR 388 >UniRef50_A5FKI7 NADH-quinone oxidoreductase subunit D n=17 Tax=Bacteria RepID=NUOD_FLAJ1 Length = 412 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 157/412 (38%), Positives = 221/412 (53%), Gaps = 7/412 (1%) Query: 190 MEALTFKPEEWGMK--RGTENED---FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPD 244 M L PE K + NED LNLGP HP+ HG F+ +L +DGE I++ P Sbjct: 1 MSELLLPPEHRYAKIIKERHNEDGSELSVLNLGPTHPATHGIFQNILLMDGERILEAEPT 60 Query: 245 IGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRV 304 IGY HR EK+ E + ++ P TDR+ Y +N M + + +EKL GI VP R +RV Sbjct: 61 IGYIHRAFEKIAENRPFYQITPLTDRMNYCSSPINNMGWWMTLEKLLGIEVPKRAQYLRV 120 Query: 305 MLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV 364 ++ EL RI H++ S D GA T + F R+KIY++ E I G R+ RIGG Sbjct: 121 IVMELARITDHIICNSILGVDTGAYTGFLYVFQFREKIYEIYEEICGARLTTNMGRIGGF 180 Query: 365 AHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAG 424 D R L +FL+ P +E +N I R+ V A++A+ +G TG Sbjct: 181 ERDWSPEAFRKLDKFLEEFPPAWKEFENLFERNRIFLDRTVNVGGITAEKAMAYGFTGPN 240 Query: 425 LRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM 484 LRA G+D+DVR A PYS YE+FDF +PVG D Y R ++ E+ +SL I+ Q L M Sbjct: 241 LRAAGVDYDVRVAHPYSSYEDFDFIVPVGKS-GDTYDRFCVRNAEVWESLSIIRQALEKM 299 Query: 485 PEG-PFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYY 543 P G + A+ P PPKE +E+LI HF V +P +E + +E G +Y Sbjct: 300 PAGNEYHAEVPDYYLPPKEDVYNSMESLIYHFKIVMGEVPVPVSEIYHAVEGGNGELGFY 359 Query: 544 LTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 L +DGS YR R P F + Q P I+G+L+SD I+ L S++ + ++D Sbjct: 360 LATDGSRTPYRLHFRRPCFIYYQAFPEMIKGALLSDAIIILSSLNVIAGELD 411 >UniRef50_A1ALP2 NADH-quinone oxidoreductase subunit D n=1 Tax=Pelobacter propionicus DSM 2379 RepID=NUOD_PELPD Length = 403 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 141/391 (36%), Positives = 214/391 (54%), Gaps = 1/391 (0%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 T + + + +N+GP+HP+ HG +I+ LDGE + GY HRG EK E ++H I Sbjct: 14 TADPNHVLVNMGPSHPATHGTIQIIAALDGERVAKADIHCGYLHRGFEKESEHHTYHKII 73 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 P+TDR+ Y N YV VEKL GI + R +R +L+E R+ H+ ++ + + Sbjct: 74 PFTDRLNYCSALNNNFAYVEGVEKLLGIELTPRCIYLRTLLAEYNRVADHVTCVAATVME 133 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 +GAMT + T R I++ + +TG R+ ++ R+GG+ +DLP GW L E L + K Sbjct: 134 MGAMTAFLYLMTIRDYIFEHLNQLTGARLTYSFARVGGLKNDLPDGWLERLEEILQFTEK 193 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 +N I R++ V A + AL WG TG LR+TG D+RK PY Y + Sbjct: 194 YCGRIHGLLDRNRIFIDRTRDVGAMSPEHALNWGYTGPILRSTGAKIDIRKDNPYLAYAD 253 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 DFE+PVG D Y R +++ E+ +S+ ++ QC+ +P+GP D P K++ Sbjct: 254 LDFEVPVGIK-GDNYDRYYVRMREIDESISMVRQCMKKLPDGPVNIDDRRIMYPTKDKVY 312 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 IE LI+HF V G +PA E + EA G +YL SDGS Y+ VR+PSFAH+ Sbjct: 313 TKIEYLISHFKLVIDGIQVPAGEIYVSHEAPNGELGFYLISDGSGRPYKLHVRSPSFAHM 372 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G V+D+I GS++ + + DR Sbjct: 373 GGMHTLLEGYQVADVIATFGSMNMIGGECDR 403 >UniRef50_C9RKY1 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKY1_FIBSS Length = 379 Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 146/402 (36%), Positives = 228/402 (56%), Gaps = 30/402 (7%) Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 P + ++R + E+F F+N+GP HPS HGA R+ L++DGE IV+ VP GY HRG EK Sbjct: 6 PPGFRLERKSNTEEF-FINMGPQHPSTHGALRLTLRMDGETIVEVVPHFGYIHRGMEKQA 64 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 E S+ YI +DR +YL N + V+A+EK + VP R IRVML EL RI SHL Sbjct: 65 ESMSYLQYIAMSDRQDYLTAIQNNLGVVIALEKGMNVGVPLRGEYIRVMLQELGRIASHL 124 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 ++ F D+G T + F F +R+ I+D++E +TG R+ +FR GG +D+P + + Sbjct: 125 VFYGCFGGDLGGQTCLLFGFKEREMIHDILEEVTGSRLTTNFFRPGGSRYDVPDTFIPRV 184 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 + FLD M + YE+ +N I+ RS G+ ++A+ +G +G LRA+G++FDVR+ Sbjct: 185 KAFLDHMEDTMKDYERFLSKNIIVLERSIGIGVLSKEDAIAYGCSGPVLRASGVNFDVRR 244 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPL 495 A PYS Y+ DF++PV DCY R +++ E+ +S++IL QC+ P EGP+++ Sbjct: 245 ANPYSIYDQLDFDVPVFHN-GDCYDRYKIRIAEIHESMKILRQCVEKFPTEGPWRS---- 299 Query: 496 TTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGI-NSYYLTSDGSTMSYR 554 KE+ ++ +P + IE KG+ +Y + + YR Sbjct: 300 -----KEKPVR-----------------LPVGRYYSEIETAKGLYATYVVAATTGEKPYR 337 Query: 555 TRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R PSF H+ I +G +SDL+ + ++D V+ ++DR Sbjct: 338 IHTRGPSFPHIAAINKMAQGHKISDLVTIMATLDPVIPEIDR 379 >UniRef50_Q5LH50 NADH-quinone oxidoreductase subunit C/D n=34 Tax=Bacteroidetes RepID=NUOCD_BACFN Length = 530 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 161/513 (31%), Positives = 256/513 (49%), Gaps = 41/513 (7%) Query: 92 FSVFYHLISIDRNRDIMLKVALAENDL-HVPTFTKLFPNANWYERETWDLFGITFDGHPN 150 V YHL S I +K + + +P+ + ++ A++ ERE +D +GI F GHP+ Sbjct: 51 LGVVYHLESTVTGERIAIKTSTNNRETPEIPSVSDIWKAADFNEREVFDYYGIVFIGHPD 110 Query: 151 LRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENED 210 +RR+ + W GHP+RKD + +P + + + P+ G + EN Sbjct: 111 MRRLYLRNDWVGHPMRKD--NNPEKDNPLRMDNEETYDTTREIELNPD--GTYQTQENVI 166 Query: 211 F----MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 F +N+GP HP+ HG R + L+GE I + GY HRG EKM E ++ + Sbjct: 167 FDDREYVVNIGPQHPATHGVMRFRVSLEGETIKKLDANCGYIHRGIEKMNESLTYPQTLA 226 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 TDR++YLG N + +EK GI V +RV IR ++ EL RI+SHLL+ S D+ Sbjct: 227 LTDRLDYLGAHQNRHALCMCIEKAMGIEVSERVKYIRTIMDELQRIDSHLLFYSCLAMDL 286 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 GA+T F+ F DR+ I D+ E G R+ + IGGV DL + +++F+ ++ Sbjct: 287 GALTAFFYGFRDREMILDMFEETCGGRLIMNYNTIGGVQADLHPNFIPRVKKFIPYLRGI 346 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + Y N I + R +GV ++A+ +G TG RA+G DVRK PY Y+ Sbjct: 347 IHEYHDVFTGNVIARQRLKGVGVLSREDAISFGCTGGTGRASGWACDVRKRMPYGVYDKV 406 Query: 447 DF-EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 DF EI G D + R M++++E+ +SL I+EQ ++N+PEGP Sbjct: 407 DFKEIVYTEG--DSFARYMVRMDEIMESLNIIEQLIDNIPEGP----------------- 447 Query: 506 QHIETLITHFLQVSWGPVM--PANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFA 563 +Q P++ P + +E ++G +L S G YR R+ Sbjct: 448 ----------IQEKMKPIIRVPEGSYYTAVEGSRGEFGVFLESHGDKTPYRLHYRSTGLP 497 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + RG+ ++DLI G++D+V+ D+DR Sbjct: 498 LVSAVDTICRGAKIADLIAIGGTLDYVVPDIDR 530 >UniRef50_B8DS05 NADH dehydrogenase (Quinone) n=7 Tax=Deltaproteobacteria RepID=B8DS05_DESVM Length = 406 Score = 267 bits (683), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 145/386 (37%), Positives = 219/386 (56%), Gaps = 26/386 (6%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + LN+GP HPS HG R++L+LDGE IV P +GY HR EKM E ++ ++P R+ Sbjct: 46 LILNMGPQHPSTHGVLRVLLELDGEYIVRAEPVLGYLHRMHEKMAEVKTPAQFMPNMGRV 105 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +YL YV AVEKLAGI +P+R +RV+ EL RI+SHLL+ ++ D+GA TP Sbjct: 106 DYLHALAWNWAYVGAVEKLAGIEIPERAEYLRVITCELNRISSHLLWWGAYLLDLGAFTP 165 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + +AF DR+ + DL++ +TG R+ + FR GGV D + + +R+F+ + RL Y Sbjct: 166 IMYAFDDREMLLDLLQLMTGSRLTYSSFRFGGVYTDASPAFVQGVRQFIPHLRSRLPMYT 225 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 +N IL+ R + V +G +G R +GI +DVR+A PYS Y+ FD+EIP Sbjct: 226 ALVTENIILRRRIEEVGVIPQDMVTRYGASGPVARGSGIAYDVRRAEPYSVYDRFDYEIP 285 Query: 452 VGGGVSDC-YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 V +C R M+++ E+ QSLRI+EQ + N+P+G HP P P + Sbjct: 286 VRH--EECSMARYMVRMAEIEQSLRIVEQAIENLPDGEHM--HP-KAPKPSFK------- 333 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 +PA ES+ +E +G ++ SDG YR ++R P F++L Sbjct: 334 -------------LPAGESYFAVEGARGKIGVWIASDGGKTPYRVKLRAPGFSNLALFAE 380 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 RG+L++D + LGS+D V+ ++DR Sbjct: 381 CARGTLLADAVAILGSLDMVIPEIDR 406 >UniRef50_UPI00016C492D NADH dehydrogenase subunit D n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C492D Length = 409 Score = 267 bits (682), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 141/397 (35%), Positives = 216/397 (54%), Gaps = 6/397 (1%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 G + E LN GP HP+ H R++L LDGE IV VPDIGY H G EK+GE ++ Y Sbjct: 14 GADQEFLYTLNFGPQHPATHTTLRLILTLDGETIVKAVPDIGYLHSGFEKLGEDLDFNQY 73 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 + DR+ Y+ NE + VEKL GI + R +R +L+EL RI+ HLL + Sbjct: 74 VTIVDRMNYISPFANECAWFTTVEKLIGIELTPRCKYLRTILAELARISDHLLCVGAAAL 133 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 D+GA+T +AF R+K+Y+++EA +G R HP++ R+GG+ D+ L+R+F+ Sbjct: 134 DLGALTGFLYAFNAREKVYNIMEAASGQRFHPSYCRVGGLMADVNDDVVALIRDFVKTFR 193 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 K A + +N I R++G+ ++A+ +G RA+G+ D+RK PY Y+ Sbjct: 194 KVHADICRLLNRNRIFIDRTKGIGVLSKEDAINTSCSGPVARASGVVRDLRKDEPYLAYK 253 Query: 445 NFD--FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD-HPLTTPPPK 501 F+I G G DCY R ++++ E+ +S +I+ + N+P GP D + T P K Sbjct: 254 ELSGAFKIVCGKG-GDCYNRYLVRMGEMLESWKIINAAVENLPSGPVNVDLNDKLTIPDK 312 Query: 502 ERTLQHIETLITHFLQVSWGP--VMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 T + IE LI HF W P E + E G +YL +DG+ ++R R R Sbjct: 313 NATYRSIEGLIQHFELFMWNRRWETPVEEVYGANETANGELGFYLVADGTGKAFRARTRP 372 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PSF H P + G +SD+ LGS++ + +++DR Sbjct: 373 PSFIHFAVFPMMMEGHQISDVPAVLGSLNIIAAELDR 409 >UniRef50_Q30PI1 NADH-quinone oxidoreductase subunit D n=45 Tax=Epsilonproteobacteria RepID=NUOD_SULDN Length = 412 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 144/392 (36%), Positives = 215/392 (54%), Gaps = 9/392 (2%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M LN GP HPSAHG R++L L E IV PDIGY HRG EKM E ++ ++P TDR+ Sbjct: 23 MILNFGPQHPSAHGQLRLMLHLQQEMIVKAHPDIGYLHRGMEKMAENMIYNEFMPTTDRM 82 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ N + LAVE+L G+ VP R VIR+ML E+ R+ SHL +++T D+GAMT Sbjct: 83 DYIASSANNYGFALAVERLIGLEVPRRAKVIRMMLLEINRLMSHLFWLATTALDIGAMTV 142 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 FAF +R+ + D++E G R+ A RIGGV D+ + L+ FLD +P+ + YE Sbjct: 143 FLFAFREREYLMDIMEGYCGARLTHAAIRIGGVPLDIQDTFITQLKTFLDKLPQNIKDYE 202 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 N I R + V + AL WG +G LRA+G+ +D+RK PY Y+ +F +P Sbjct: 203 DLLDTNRIWLMRMEEVGVISKEMALSWGCSGPMLRASGVAWDIRKEEPYELYDEVEFRVP 262 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRIL-------EQCLNNMPEGPFKADHPLTTPPPKERT 504 D + R + +EE+R+S +IL E+C+ + + A P PK Sbjct: 263 YSDK-GDNFARYRIYMEEMRESAKILYQTIDMYEKCVKD-NQTELMAHAPKYISAPKLDI 320 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 + +L+ HF+ V+ G P E + E+ KG +Y+ S G YR ++R PSF H Sbjct: 321 MTQNYSLMQHFVLVTQGMRPPVGEVYVATESPKGELGFYINSQGGPYPYRLKLRAPSFWH 380 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G + D++ +G+ + V +VDR Sbjct: 381 TGILTDILPGHYIPDVVSIIGTTNIVFGEVDR 412 >UniRef50_A7H9V5 NADH-quinone oxidoreductase subunit D 2 n=8 Tax=Myxococcales RepID=NUOD2_ANADF Length = 431 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 146/386 (37%), Positives = 209/386 (54%), Gaps = 1/386 (0%) Query: 211 FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDR 270 M +NLGP+HP+ HG R V++LDGE I DIG+ HRG EK E +W PYTDR Sbjct: 47 LMTVNLGPSHPAMHGVTRAVVELDGEMIRSMKLDIGFLHRGFEKSCENVTWTQCFPYTDR 106 Query: 271 IEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 + Y+ +N + + LAVEKL + VP+R +RV+ SE+ RI HL + ++GAMT Sbjct: 107 LNYVSSIMNNVGFALAVEKLCKLDVPERAKYLRVVTSEIHRICDHLTLVGAMAMELGAMT 166 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 +A R IYD + + G R+ + RIGGVA D P GW + LD + + Sbjct: 167 VFLYAIEARDIIYDRLAELCGARLTSNYGRIGGVARDTPDGWIEKTEKTLDRVKGYVDEI 226 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 ++ +N I R++G +A+E G TG LRA+G +D+RKA PY Y+ DF+I Sbjct: 227 DQLVSRNRIFIDRTRGTGVVPRADAIELGFTGPCLRASGEPYDLRKAAPYLVYDRIDFDI 286 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 PVG D + R +++EE+RQS RI+ QC M G PPK IE Sbjct: 287 PVGTN-GDNFDRFQMRMEEMRQSDRIIRQCFAQMEPGEIAVQDFRYVLPPKPLVYGTIEG 345 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 L+ HF + G +PA E++ EA G +Y+ SDG Y+ +R P + L +P Sbjct: 346 LMAHFKIIMEGIQVPAGEAYGYTEAANGELGFYVVSDGGGRPYKLGLRAPGWPMLAALPF 405 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 GSL+SDLI SI+ + +V++ Sbjct: 406 MSVGSLLSDLIPTFDSINMIGGEVEQ 431 >UniRef50_C1AB36 NADH-quinone oxidoreductase chain D n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB36_GEMAT Length = 412 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 135/392 (34%), Positives = 212/392 (54%), Gaps = 1/392 (0%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 G +D + +N+GP+HP+ HG +I+ +LDGE+++ GY HRG EK E +WH+ Sbjct: 22 GPSRDDTVVVNIGPSHPATHGTVQIIAELDGEKVLRTDVHCGYLHRGFEKECEDHTWHNL 81 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 IPY DR+ Y +N Y VE+L GI + R +R +LSE R+ HL ++ + Sbjct: 82 IPYVDRLNYCSALINNFAYCDGVEQLMGIEITPRTKYLRTLLSEYSRLADHLTCVAASLM 141 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 ++GAMT + T R +Y+ + A+TG R+ ++ RIGG+A D+P GW + L E L Sbjct: 142 ELGAMTAFLYLVTVRDSMYEHLAALTGARVTYSYGRIGGLAADVPDGWFKRLGEILRDYE 201 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 + +N I R + V +AL WG TG LR+TG D+RK PY Y Sbjct: 202 QYAERVHGLVDRNRIFIDRLRNVGTINTADALHWGFTGPVLRSTGAKRDLRKDTPYLAYA 261 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 DF++PV G D Y R +++ E+ +S+ ++ Q ++ +P+GP D P K+ Sbjct: 262 ELDFDVPV-GIFGDNYDRYYVRMREMDESVYMIRQLMDMIPDGPINVDDRRCVFPEKQLV 320 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 IE+LI HF V GP +PA +++ E G +Y+ S G + Y+ VR+PSF H Sbjct: 321 YSEIESLINHFKLVMEGPAVPAGDAYVAHEGANGELGFYIVSTGEGVPYKVHVRSPSFVH 380 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G ++D++ GSI+ + + DR Sbjct: 381 MGGAHRMLDGYQLADIVTSFGSINMIGGECDR 412 >UniRef50_A8VSQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A8VSQ7_9BACI Length = 371 Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 136/384 (35%), Positives = 209/384 (54%), Gaps = 23/384 (5%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M LN+GP HPS HG FR+ L++DGE I P +GY HRG+EK+ E + +IPYTDR+ Sbjct: 10 MTLNMGPQHPSTHGVFRLQLEVDGETIQKATPIMGYLHRGSEKLAEGFLYTQFIPYTDRL 69 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ N Y +EKL VP+R +RV+ EL RI SHL++ T++ D+GAM+P Sbjct: 70 DYMNAMTNNYVYCQTIEKLLDWEVPERAEYLRVITMELNRIASHLVWWGTYLLDIGAMSP 129 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +AF DR+ I D + I+G RM + RIGGV D P GW + E ++ + ++ ++ Sbjct: 130 FLYAFRDRETILDRLNEISGARMTFNYHRIGGVKWDAPEGWIDNVLETVEELKHNISEFD 189 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 N + + R+ GV ++ L WG +G R +G++ DVRK PYS Y++FDF++P Sbjct: 190 TLVSGNEVFQARTIGVGVLSKEKVLNWGLSGPLARGSGVEVDVRKTEPYSVYDHFDFDVP 249 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 V D Y R +++ E+ +SL+I+EQ N+PEG + Sbjct: 250 VEQE-GDVYARYKVRIREMHESLKIIEQACKNLPEG----------------------DI 286 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 I + P E + EA+KG Y S+G YR ++R PSF ++ + Sbjct: 287 IHKKGKKIMMIKPPEGEVYTRAEASKGEIGVYAISNGKNKPYRVKLRRPSFVNVSILQDM 346 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVD 595 + G + +L+ GS+D V+ +VD Sbjct: 347 LIGESIQNLVAIFGSLDVVLGEVD 370 >UniRef50_B1ZUJ2 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=Bacteria RepID=NUOD2_OPITP Length = 399 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 140/383 (36%), Positives = 211/383 (55%), Gaps = 25/383 (6%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +NLGP HP+AHG R+++++DGE + + P IGY HR EKMGE ++W ++P T RI+Y Sbjct: 42 INLGPQHPAAHGVLRVLMRMDGEWVENAEPVIGYIHRMHEKMGENRTWAKFLPNTSRIDY 101 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 L +V VE+ I VP+R IRV+ SEL RI SH ++ + D+G TP+ Sbjct: 102 LSAMHYTHAWVGVVERGLKIEVPERAEYIRVITSELNRIASHQVWWGALLLDLGGFTPIL 161 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 +AF DR+KI DL+E + G R+ ++R GG+ +D + + REF+ +M RL Y Sbjct: 162 YAFDDREKILDLLEGLCGARLTYCYYRFGGLYNDADDDFLKGTREFVKYMRPRLKMYRDL 221 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 N IL+ R G+ A ++G TG +R +G+ +DVR+A PYS Y F+IP Sbjct: 222 VTDNVILRQRLTGIGPISADTCRKYGATGPVIRGSGVAYDVRRAEPYSVYPKLQFKIPTY 281 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D R +++++E+ +SL I+EQCL+ + GPF A P R ++ Sbjct: 282 PEC-DSMARYLVRMDEMEESLNIIEQCLDLIQPGPFMA-------PKVPRVIR------- 326 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 +PA + +EA +G + SDG YR R+RTPSF +L R Sbjct: 327 ----------LPAGDYTYAVEAARGRFMVRVVSDGKENPYRARLRTPSFGNLSLFEETSR 376 Query: 574 GSLVSDLIVYLGSIDFVMSDVDR 596 G L+ D + +GS+D V+ D+DR Sbjct: 377 GMLLPDALAMMGSLDLVIPDIDR 399 >UniRef50_Q979M3 NADH dehydrogenase I chain D n=6 Tax=Thermoplasmatales RepID=Q979M3_THEVO Length = 369 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 141/391 (36%), Positives = 215/391 (54%), Gaps = 28/391 (7%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E++ +N GP HPS HG R+ ++LDGE + D P IGY HR AEK+ E Q + + Y Sbjct: 4 EEWTEVNFGPQHPSMHGVLRLKVKLDGEIVKDVEPIIGYLHRNAEKICELQFYCDNMIYF 63 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 DR++Y+ E+ Y+ A EKL + P R IRVM+ EL RI SHL+++ F D+G Sbjct: 64 DRMDYVAAMNMEIGYLEAAEKLLDVEPPGRAKWIRVMMGELNRIASHLVWLGAFGLDLGM 123 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 +TP F+ F +R+KI + ++G R + IGGV D+ +++F+ PK L Sbjct: 124 LTPFFYCFKEREKILKIFTEVSGSRQQLNYMSIGGVYQDVTDEALDHIKQFITEFPKELN 183 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 ++N I R++GV + A+++G TG LRA+G+++DVRKA PY Y+ +F Sbjct: 184 MIANLFVKNDIFLSRTKGVGILSKEMAIDYGVTGPMLRASGVEYDVRKAEPYLVYDKVNF 243 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPF---KADHPLTTPPPKERTL 505 +IPV D R ++++EE+RQS++I++Q + +P GP+ KA PL Sbjct: 244 DIPVSFK-GDNLARFLVRIEEMRQSVKIIDQTIQKLPAGPYFNQKAKKPLMIR------- 295 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 + E + E+ KG Y+ DGS YR RVR+P+F +L Sbjct: 296 -----------------LRGQGEVYARTESPKGEFGVYIVGDGSLRPYRVRVRSPTFKNL 338 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +PA +G +++DLI GSID V +VDR Sbjct: 339 SVLPALAKGQMIADLISIGGSIDLVFGEVDR 369 >UniRef50_C2BU22 NADH dehydrogenase (Quinone) n=4 Tax=cellular organisms RepID=C2BU22_9ACTO Length = 457 Score = 255 bits (651), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 151/412 (36%), Positives = 222/412 (53%), Gaps = 22/412 (5%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 + + D + +NLGP HPS HG R++++L+GE + DC GY H G EK E ++++ + Sbjct: 47 SAHNDRIAVNLGPVHPSTHGVLRVIVELEGETVKDCRLGTGYLHTGIEKSMEYRTYNQGV 106 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRINSHLLYISTFI 323 Y R++Y+ +E+ + LAVEK G+T VP R + IRV+L EL RI SHL+ + T Sbjct: 107 AYCSRMDYVAPFFSEVAWCLAVEKALGVTDQVPRRASEIRVLLMELNRIASHLVAVGTGA 166 Query: 324 QDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWM 383 ++GA T + F R++I + E ITG RM+ + R GGV++DL ++RE L + Sbjct: 167 NELGATTMLTTGFRGREEILRIFEHITGLRMNNTYMRPGGVSNDLLDDTIDMIREKLPLV 226 Query: 384 PKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 + + + + N I GR + V + TG LRA G+ D+RK +PY GY Sbjct: 227 KRDIGEMQDLIMANPIFIGRMKNVGWLPLSTMMALSLTGPCLRAGGLPLDMRKLQPYCGY 286 Query: 444 ENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEG--------------PF 489 E + F++P SDCYTR ++ EE+ QSLRI+ Q L+ + + P Sbjct: 287 EAYTFDVPTRDH-SDCYTRTEVRFEEMYQSLRIVYQVLDRLEQSEGEPVMIADPKFAYPS 345 Query: 490 K----ADHPLTTPPPKERTLQH-IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYL 544 K AD P L H +E LI HF V+ G +P + + +E KGI +L Sbjct: 346 KLTIGADGQGQDPEHVSHILGHSMEELIHHFKLVTEGFRIPPGQVYAQVEHAKGIQGVHL 405 Query: 545 TSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +DG T YR R PS+A+LQ G L+SDL+V +GSID V VDR Sbjct: 406 VTDGGTHPYRAHFRDPSYANLQSASMMCEGGLISDLVVSIGSIDPVFGGVDR 457 >UniRef50_Q1AVI6 NADH-quinone oxidoreductase subunit D n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=NUOD_RUBXD Length = 396 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 138/384 (35%), Positives = 208/384 (54%), Gaps = 27/384 (7%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +N+GP HP+ HG R++L+LDGE IV C P +GY HR EK+ E +++ + IP TDR++Y Sbjct: 39 MNMGPQHPAMHGLLRLILELDGETIVRCDPVMGYLHRCQEKIAENRTYPAVIPLTDRLDY 98 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 NE Y LAVE L G+ +P R IRV++ EL RI SHL I + ++GA TP+ Sbjct: 99 FANMHNEHGYCLAVEDLLGVEIPPRAEYIRVLMCELMRIASHLPSIGFLLLELGAFTPIL 158 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA-SYEK 392 +AF +R++I + EA+TG RM + RIGGV DLP + E+++ + KR+ + Sbjct: 159 YAFRERERIQNFFEAVTGARMMFHYIRIGGVKADLPPDIPEKIWEYVEGLEKRIKPDFID 218 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 N I R++G++ +EA+E G TG LR TG+ FDVR+ PYS Y DFE+ V Sbjct: 219 LIEGNEIFIERTRGISRLTQEEAIELGLTGPPLRCTGVAFDVRRDYPYSVYPELDFEV-V 277 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 D ++++E+ +S++I+ QCL MPEG D PP+ Sbjct: 278 TDTAGDVEASYRVRIKEVYESIKIIRQCLEKMPEGEVMGDVGRRVRPPE----------- 326 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 E F +E +G + ++ SDGS YR R PSF ++Q + + Sbjct: 327 --------------GEGFGRVEGPRGEFAVHVVSDGSDTPYRVHYRDPSFVNMQLLQEKM 372 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 G + D++ +G +D V D+ Sbjct: 373 PGHYLPDIMPIMGLVDPVSGGWDK 396 >UniRef50_A8A9X2 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X2_IGNH4 Length = 540 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 156/522 (29%), Positives = 267/522 (51%), Gaps = 54/522 (10%) Query: 93 SVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPN-- 150 VF+ + I ++L + + +P+ + L+P W+E ET+++FGI F GHP+ Sbjct: 55 QVFFLVHRIRDASSVVLSTKVDRENRELPSLSSLYPGVEWHENETYEMFGINFTGHPDYE 114 Query: 151 ----LRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGT 206 +R++++ + + P + +P +L K W GT Sbjct: 115 RWGRIRKLLLSEDPRLFP-KDRFPLLKDSGGYKDLPKVN--------------WAEIEGT 159 Query: 207 ENE------DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 + E D ++ +GP HP+ HG +L L GE + D +P +GY HRG E + E++ Sbjct: 160 DQEREGLREDLTYVYVGPQHPATHGPVGFLLGLKGEIVEDVIPRLGYVHRGVEWIYEQKE 219 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 320 + IP DR Y+ G E PYV+A+E++ + V R ++R++ +EL RI SHLLYI Sbjct: 220 YLKVIPLLDRQCYIDGIGWEWPYVMALEEIMDVKVDRRAQLLRILAAELSRIQSHLLYIG 279 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 +F ++V +T + DR+ +L+E +TG RM + R GGVA DLP+G+ + + + Sbjct: 280 SFAENVNHLTAFAWTVRDREVFINLLEMLTGQRMTFNYLRPGGVAFDLPQGFKDVYEKVV 339 Query: 381 DWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPY 440 K + L N + R++GVA A++A+++G +G LRA+G+ +D+R +PY Sbjct: 340 ARFHKHFEKLIETTLDNPTVAMRAEGVAQVSAEDAIKYGWSGPNLRASGVAWDLRINKPY 399 Query: 441 SGYEN-FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 GY++ DFE V G V D R++++ EE+RQSL+I+ Q L Sbjct: 400 GGYDDGIDFEGAV-GSVGDNLDRMLVRFEEIRQSLKIIRQVL------------------ 440 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR--- 556 +E T + L TH +V P P ++ ++ +G N L ++ S +RTR Sbjct: 441 -RELTERGQNELGTHLKRVPPFPRKPGI-AYGYHDSPRGENGILLVANPSDPKWRTRPWR 498 Query: 557 --VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +R+P F H + +G L+ D + + S+D ++++DR Sbjct: 499 VHMRSPVFVHTMSLKYLGKGLLLQDFLAFYISLDTCVAEMDR 540 >UniRef50_B1VSH7 NADH-quinone oxidoreductase subunit D 2 n=6 Tax=Actinomycetales RepID=NUOD2_STRGG Length = 394 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 133/397 (33%), Positives = 216/397 (54%), Gaps = 24/397 (6%) Query: 201 GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 G+ E+ D M LN+GP HPS HG R+ + LDGE + P IGY HRGAEK+ E + Sbjct: 21 GIGGAAESTD-MVLNIGPQHPSTHGVLRLRIVLDGERVQHAEPVIGYMHRGAEKLFEARD 79 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 320 + I +R ++L NE+ V+AVE++ G+ VP+R R +L+EL R+ +HL+++ Sbjct: 80 YRQIIMLANRHDWLSAFSNELGVVMAVERMLGMEVPERAVWTRTLLAELNRVLNHLMFLG 139 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 ++ ++G +TPVF AF +R+++ ++E ++G RMH + R+GG+ D+P GW +R+ + Sbjct: 140 SYPLELGGITPVFHAFREREELQAVMEEVSGGRMHYMFNRVGGLKEDVPAGWAGRVRDAV 199 Query: 381 DWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPY 440 + R+ YE L N I +GR++ V A +G +G RA+G+DFD+R+ PY Sbjct: 200 ASVRSRMDVYENLVLGNEIFRGRTRDVGVLSAAAVHAYGVSGPIARASGVDFDLRRDEPY 259 Query: 441 SGY-ENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 Y E D V DC R +E+ SL + + CL+ M L P Sbjct: 260 LAYGELRDTLKVVTRTEGDCLARFECLLEQTLNSLDLADACLDRMAH--------LAPGP 311 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 +R + ++ P ++ E G+N YYL S G YR ++R+ Sbjct: 312 INQRLPKVLKA--------------PEGHTYAWTENPLGVNGYYLVSKGEKTPYRLKLRS 357 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SF ++Q + + G+LV+D++ LGS+ FV+ D+D+ Sbjct: 358 ASFNNIQALTELLPGTLVADMVAILGSLFFVVGDIDK 394 >UniRef50_A4XCQ7 NADH-quinone oxidoreductase subunit D 2 n=22 Tax=Actinomycetales RepID=NUOD2_SALTO Length = 388 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 139/416 (33%), Positives = 227/416 (54%), Gaps = 28/416 (6%) Query: 181 LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVD 240 +T D ++ LT G + GT+ M LN+GP HPS HG R+ L LDGE +V Sbjct: 1 MTGMTTDADLRELTVGTGAGGEQLGTD----MVLNIGPQHPSTHGVLRLRLVLDGERVVS 56 Query: 241 CVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVN 300 P +GY HRGAEK+ E + + I +R ++L NE+ VLAVE+L G+ VP+R Sbjct: 57 AEPVVGYMHRGAEKLFEVRDYRQIIVLANRHDWLSAFANELGVVLAVERLLGMEVPERAT 116 Query: 301 VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFR 360 +R+ L+EL R+ +HL+++ ++ ++GA+TP+F+AF +R+ + +E ++G R+H + R Sbjct: 117 WLRMALAELNRVLNHLMFLGSYPLEIGAITPMFYAFRERETLQTALEEVSGGRIHYMFNR 176 Query: 361 IGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGT 420 +GG+ ++P GW R + + + L + +N I R+ GV A +A +G Sbjct: 177 VGGLKEEVPAGWTGRARAAIGEVRRSLPDLDNLIRRNEIFLARTVGVGVLSAAQAAAYGA 236 Query: 421 TGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQC 480 +G RA+G+D D+R+ PY Y+ D + V DC++R + ++++ SL + EQC Sbjct: 237 SGPVARASGLDLDLRRDEPYLAYDQLDVPV-VTRTAGDCHSRFEVLLDQVYVSLDLAEQC 295 Query: 481 LNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGIN 540 L+ + LT P I T + L+ P ++ E GIN Sbjct: 296 LDRVDR--------LTGP---------INTRLPKVLKA------PEGHTYAWTENPLGIN 332 Query: 541 SYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YYL S G +R ++RT S+A++Q + + G LV DL+ LGS+ FV+ D+D+ Sbjct: 333 GYYLVSRGEKTPWRLKLRTASYANVQALATLLPGCLVPDLVAILGSMFFVVGDIDK 388 >UniRef50_A0B812 F420H2 dehydrogenase subunit C n=6 Tax=Archaea RepID=A0B812_METTP Length = 390 Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 137/401 (34%), Positives = 208/401 (51%), Gaps = 32/401 (7%) Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 EE +K +E M +++GP H G F + L ++GE + D+GY H+G EK+ E Sbjct: 20 EEAEIKSDSE----MIMHMGPQHAIVPGPFLLDLLIEGERVKKAFLDVGYIHKGIEKIME 75 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 +++ I YTDR+ YL N Y AVEKL GIT P+R IRV+L+EL RI SHLL Sbjct: 76 NRTYLQGIVYTDRMCYLASITNNEAYCGAVEKLLGITPPERAQYIRVILAELSRIQSHLL 135 Query: 318 YISTFIQDVGAMT--PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL 375 F+ +GA T P + DR+ I L+E+ITG R+ + R GGV +DLP G+ Sbjct: 136 GTGEFLTLLGAATYSPFQYMIIDREDIVYLMESITGARITHTFVRFGGVRNDLPDGFADK 195 Query: 376 LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR 435 R L M +R Y + I R +G+ +A G +G LRA+ +D+R Sbjct: 196 ARPILKRMRERTEEYMDLLHSDPIYTRRMRGIGVLSPGDARRLGVSGPPLRASDTPYDMR 255 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPL 495 + P Y + DF++ V D RV +++EE+ +S+ I+EQCL+ +P+GP + P Sbjct: 256 REDPILVYPDLDFKV-VTRKAGDAEARVEVRLEEILESIHIIEQCLDQIPDGPIQEKLPK 314 Query: 496 TTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT 555 P E++ +E +G +Y+ SDGS YR Sbjct: 315 KIKP-------------------------EPGEAYYRVEDPRGEMGFYVVSDGSEKPYRV 349 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +VR P +A++Q +P + G+ V+D++ GS+D S+VDR Sbjct: 350 KVRGPVYAYMQALPPLLEGAYVADVVAIAGSMDACTSEVDR 390 >UniRef50_A6LMC4 NADH-quinone oxidoreductase subunit D n=14 Tax=cellular organisms RepID=NUOD_THEM4 Length = 367 Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 137/384 (35%), Positives = 207/384 (53%), Gaps = 23/384 (5%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 L GPNHP HG F + + ++G+ +V P G+ HRG EK+ ER+ W+ + RI Sbjct: 6 LFFGPNHPGMHGNFSVHMYVEGDTVVKARPLPGFLHRGFEKLMERRLWYQNLALIPRICV 65 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 +NE+ Y LAVEK+A I VP+R IR+++ EL RI +HL S +G T F Sbjct: 66 PEPDINELCYALAVEKIAKIDVPERAQWIRMIVLELARIANHLWSFSGIGGPIGLYTGSF 125 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + DR +I D+ E +TG R++ + GGV DL ++++ E LD++ RL YEK Sbjct: 126 WGTADRDRILDIFENLTGARVYHMYIVPGGVRKDLTPKIEKMILETLDYIESRLPDYEKL 185 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 L+N I+ R +G+A + ALE G TG GLRATG+ +D+RK PY Y+ DFE+P Sbjct: 186 ILKNRIVHTRLKGIAKLDRETALEMGVTGVGLRATGVPYDIRKVDPYLFYDKVDFEVPFS 245 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D + RV LK E+ QS++I++Q L MP G K + P++ E Sbjct: 246 TD-GDAFARVYLKFREIFQSIKIVKQALEKMPVG--KVNTPIS------------EGSAL 290 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH-LQQIPAAI 572 F +P +++ IE+T+G YY+ SDG YR VR S+ + + Sbjct: 291 RFR-------VPKGQAYVHIESTRGEYGYYMVSDGGEKPYRVVVRGASYPQTFIGVEKYL 343 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 G+ + D+ ++L ++D +VDR Sbjct: 344 PGTRIEDVPIWLSTMDVCAPEVDR 367 >UniRef50_Q9KGW7 NADH dehydrogenase I subunit C n=3 Tax=cellular organisms RepID=Q9KGW7_PSEFL Length = 200 Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 105/152 (69%), Positives = 128/152 (84%), Gaps = 1/152 (0%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMD 77 D V+ EL NRFGP+AFT Q TRTG+PV+W+ R +L+EV FL+ LPKPYVML+DLHG+D Sbjct: 16 DQDVVVELNNRFGPEAFTAQPTRTGMPVLWVARAKLVEVLTFLRNLPKPYVMLYDLHGVD 75 Query: 78 ERLRTHREGLP-AADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 ERLRT R+GLP DF+VFYHL+SI+RN D+M+KVAL+E+DL VPT T ++PNANWYERE Sbjct: 76 ERLRTKRQGLPDGVDFTVFYHLMSIERNSDVMIKVALSESDLSVPTVTGIWPNANWYERE 135 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKD 168 WD+FGI F GHP+L RIMMP TW+GHPLRKD Sbjct: 136 VWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKD 167 >UniRef50_A3ZL03 NADH dehydrogenase (Ubiquinone) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL03_9PLAN Length = 418 Score = 230 bits (587), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 129/408 (31%), Positives = 208/408 (50%), Gaps = 44/408 (10%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 D M +N+GP HPS HG R+VL+ DGE + + P IGY HR AEK+GE + +IPYTD Sbjct: 34 DEMLVNMGPQHPSTHGVLRLVLRTDGEVVSEATPHIGYLHRCAEKIGENLTPRQWIPYTD 93 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R++YL G + + LAVEKL +P++ +RV+++EL RI SHL+ + T+ D+G+ Sbjct: 94 RMDYLAGMNMNLGWALAVEKLIDYDLPEKARHLRVIIAELNRIASHLVGMGTYGLDLGSF 153 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 +P +AF +R++I DL+E G R+ ++ GG DLP GW + L FLD + Sbjct: 154 SPFLYAFRERERILDLLEDACGARLTYSYLTPGGATADLPPGWLQKLTGFLDQFEPVILD 213 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK---ARPYSGYENF 446 Y N I R+ + A+ A+++G +G LR +G+D+D+R+ R S Y + Sbjct: 214 YHALLTNNAIFIKRTANIGVMSAEMAIDYGCSGPVLRGSGVDYDLRRDGEERYTSLYAGY 273 Query: 447 DFE-----------------IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPF 489 FE +P + DC+ R +++ E+ Q++ +L Q + + Sbjct: 274 AFEVIVEKNGSYPRDHEYPPVPSDAVLGDCWHRFYVRMLEVIQAIDLLRQGIEKYSQATG 333 Query: 490 KADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS 549 P + +P E++ E +G +Y+ SDGS Sbjct: 334 DWGTP-----------------------IKLATKLPKGEAYLETECPRGQMGFYIVSDGS 370 Query: 550 -TMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++ R R R+ F +L P R L++D+ +GS+D VM ++DR Sbjct: 371 GSIPLRARARSSCFCNLSVAPELCRDCLIADVPAIIGSLDIVMGEIDR 418 >UniRef50_D2R4P3 NADH dehydrogenase (Quinone) n=3 Tax=Planctomycetaceae RepID=D2R4P3_9PLAN Length = 401 Score = 228 bits (580), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 128/409 (31%), Positives = 207/409 (50%), Gaps = 47/409 (11%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 D M +N+GP HPS HG R+VL+ DGE + P +GY HR AEK+GE + +IPYTD Sbjct: 18 DEMLVNMGPQHPSTHGVLRLVLRTDGEIVSQVEPHLGYLHRCAEKIGENLTPRQWIPYTD 77 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R++YL + + L VEKL G + ++ +RV+++E+ RI SHL+ + + D+G Sbjct: 78 RMDYLAAMNMNLGWALTVEKLLGHQISEKARHLRVIIAEMGRIASHLVGMGAYGLDLGTF 137 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 +P +AF +R+KI DL E G R+ ++ GG DLP+GW + EFL + Sbjct: 138 SPFLYAFREREKILDLFEEACGARLTYSYLTPGGATADLPKGWLQKCEEFLKQFEPVIQE 197 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK---ARPYSGYENF 446 Y N+I R+ + A+ A+++G TG LR +G+D+D+R+ R Y+ + Sbjct: 198 YHALLTTNSIFVKRTAAIGIMSAEMAIDYGCTGPVLRGSGVDYDLRRDGEERYTEMYDGY 257 Query: 447 DFE-----------------IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLN--NMPEG 487 FE +P + DC+ R +++ E+ QS+ ++ Q + + G Sbjct: 258 AFEVIVSRNGHYPADHDYPPVPKEAVLGDCWHRFYVRMLEVVQSIDLVRQAIERYSTASG 317 Query: 488 PFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD 547 + LTT PK E++ E +G +Y+ SD Sbjct: 318 DWGQPIKLTTKLPK-------------------------GEAYLETECPRGQMGFYIVSD 352 Query: 548 GSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G+ + +R R R+ SF +L RG L++D+ +GS+D VM ++DR Sbjct: 353 GNAIPWRVRARSSSFCNLSITADLCRGCLIADVPAIVGSLDIVMGEIDR 401 >UniRef50_UPI00019012E4 NADH dehydrogenase subunit D n=1 Tax=Mycobacterium tuberculosis T92 RepID=UPI00019012E4 Length = 424 Score = 227 bits (579), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 132/358 (36%), Positives = 201/358 (56%), Gaps = 19/358 (5%) Query: 204 RGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHS 263 R + + + +N+GP HPS HG R++L+++GE +V+ IGY H G EK E + W Sbjct: 31 RSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGIGYLHTGIEKNLEYRYWTQ 90 Query: 264 YIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRINSHLLYIST 321 + + R++YL NE Y L VEKL GIT +P+RVNVIRV++ EL RI+SHL+ ++T Sbjct: 91 GVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVLMMELNRISSHLVALAT 150 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 ++GAMTP+F F R+ + L E ITG RM+ A+ R GGVA DLP + E L Sbjct: 151 GGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGGVAQDLPPNAATEIAEALK 210 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + + L + +N I K R+QGV + G TG LR+TG+ D+RK+ PY Sbjct: 211 QLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGPILRSTGLPHDLRKSEPYC 270 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGP-FKADHPLTTPPP 500 GY++++F++ + D Y R M++V+E+ +S++I+EQCL+ + GP +D L P Sbjct: 271 GYQHYEFDV-ITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKLRPGPTMISDRKLAWPAD 329 Query: 501 KE-------RTLQHI--------ETLITHFLQVSWGPVMPANESFQMIEATKGINSYY 543 + + +HI E LI HF V+ G +PA + ++S Y Sbjct: 330 LQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGPGLRRGGVPPVVSSAY 387 >UniRef50_B3ES55 NADH-quinone oxidoreductase subunit D n=19 Tax=Bacteroidetes/Chlorobi group RepID=NUOD_AMOA5 Length = 403 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 130/394 (32%), Positives = 209/394 (53%), Gaps = 29/394 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + +N+GP HP+ HG R+ + LDGE +VD VP +GY HR EK ++ IP+ DR+ Sbjct: 30 VLINIGPQHPATHGILRLEVILDGEIVVDVVPHLGYLHRCFEKHAATLPYNQTIPFVDRL 89 Query: 272 EYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 +YL +E + + VE + G+T +P RV IRV+++EL R+ SH + I T+ D+GA Sbjct: 90 DYLAAMNSEHAFAMGVEHMLGLTGKLPRRVEYIRVLMAELNRLASHFMAIGTYGIDLGAF 149 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 T + DR+ I L E +G RM + IGG+ +DLP G++ EF+ ++ +L Sbjct: 150 TSFLWLMRDREYILRLFEWASGARMLYNYIWIGGLYYDLPVGFEERCLEFITYLKPKLEE 209 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 + + NT+ R+ V A+ G +G LRA+G+ D+R+ YS Y F+ Sbjct: 210 INQLLIDNTLFIKRTANVGVLPLATAINHGVSGPILRASGLRLDLRRIDGYSIYPELSFD 269 Query: 450 IPVG----GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFK-AD-HPLTTPPPKER 503 IP+G G V DC+ R +K +E ++S++I EQCL + + AD +P P K R Sbjct: 270 IPIGEGLMGHVGDCWDRTWVKFQECKESIKITEQCLVRLTSDLKRTADFNPQKMVPKKVR 329 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKG-INSYYLTSDGSTMSYRTRVRTPSF 562 T A + + E +G + ++ SD R + R+ SF Sbjct: 330 T--------------------KAQDCYIRAENPRGELGFFFRASDNGDKPIRCKARSSSF 369 Query: 563 AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++L I + +G +++DLI +GSID V+ ++DR Sbjct: 370 SNLSVISSIAKGQVLADLIAIIGSIDIVLGEIDR 403 >UniRef50_D2PDB9 NADH dehydrogenase (Ubiquinone) n=10 Tax=Sulfolobaceae RepID=D2PDB9_SULIS Length = 410 Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 131/386 (33%), Positives = 208/386 (53%), Gaps = 8/386 (2%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 LN+GP HP + G RI ++L+G+ I D D+GY HR EK+ E +++ IP +R Sbjct: 30 LNVGPQHPGS-GHMRIFVKLNGDIIEDVDLDVGYVHRTVEKLSENRNYMHLIPLVERPAI 88 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 L + Y++AVEK+ G+ VP+R +R +E+ RI SHL + +G T Sbjct: 89 LDSIHMNLGYIIAVEKILGVDVPERAQYLRSFAAEVNRIASHLYGLGILSIFLGHSTGFM 148 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + F DR+ ++EA+TG R+ ++ GGV D+ + + + + + +RL ++K Sbjct: 149 WGFGDREVWVTILEALTGARVTNSYVIPGGVRRDISQEIKDMTLKAISYQRRRLEDWKKI 208 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 N ++ R + V + A++WG G LRA+G+ +DVRK PY Y+ DFEIPV Sbjct: 209 FFYNPSIRARLENVGVMSKENAIKWGAVGPNLRASGVYYDVRKIEPYGAYDKLDFEIPVY 268 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET--- 510 D R ++++EE+ QS+RILEQ + N+PEG +D PP R ++ ET Sbjct: 269 KE-GDGLARGLVRLEEIEQSMRILEQIIKNIPEGNILSDRFFKQIPPT-RLKKYWETYRR 326 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 ++ S+ P P E+ +EA +G YY+ SDGS YR R+ TPS+ + Sbjct: 327 IVLPGYYASFRP--PKGEAISRVEAGRGELVYYVVSDGSPKPYRLRMITPSYRSIYVFKE 384 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 +GS +DL+ GS+D+ + DR Sbjct: 385 LCKGSRYADLVSIYGSLDYFPPEADR 410 >UniRef50_B6YWP8 Hydrogenase 4, subunit 5 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWP8_THEON Length = 540 Score = 221 bits (562), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 159/526 (30%), Positives = 238/526 (45%), Gaps = 62/526 (11%) Query: 75 GMDERLRTHREGLPAADFSVFYHLISID-RNRDIMLKVALAENDLHVPTFTKLFPNANWY 133 G+DER P YH+ + D R ++LK+ E VP+ T + A W Sbjct: 47 GVDER--------PINGRFAMYHIFNCDTEGRYVVLKITSPEGSPEVPSITPVIKGAEWS 98 Query: 134 ERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEME 191 ERE D+ GI F GHP R+++P W +PLRKD+P Sbjct: 99 EREAMDMLGIVFSGHPKPERLILPDDWPEGVYPLRKDFPYNKK----------------- 141 Query: 192 ALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYH-HR 250 P + K +D M + LGP HPS H L + G+++VD G+H HR Sbjct: 142 ---LPPSKPIEKEREHKKDVMEIPLGPYHPSLHEPEYFELYVKGDKVVDAEYR-GFHIHR 197 Query: 251 GAEKMGERQSWHSYIPY-TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSEL 309 G EK+ E + + IP+ +RI + GC + Y AVE AGI VP+R IR ++ E+ Sbjct: 198 GMEKLAESRMTINQIPFLAERICGICGCTHSAAYCQAVEDAAGIYVPERAQYIRTIMLEV 257 Query: 310 FRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP 369 RI+SHLL+ +G + + R+ I D+ E ITG R +GGV D+ Sbjct: 258 ERIHSHLLWFGVVCHLLGFDSGFMHIWRAREYIMDIAELITGNRKTYGINIVGGVRRDIT 317 Query: 370 RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATG 429 + LD + K + L+ R +GV KEA E G G R++G Sbjct: 318 EDKKEKTLKLLDMVEKESREVLDNIAEMKELRERMEGVGVLPKKEAREIGVVGPMARSSG 377 Query: 430 IDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPF 489 ID DVR+ PY+ Y++ DF++PV D + R +++ EE+ +S ++ Q L NMP G Sbjct: 378 IDTDVRRDHPYAAYKDLDFKVPVYKE-GDVFARFLVRYEEIFESFNMIRQALENMPPGEL 436 Query: 490 KADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS 549 D PP ++ G + EA +G N + + + G Sbjct: 437 INDE-YEIPP----------------FKLGIG----------VTEAPRGENIHAVITWGE 469 Query: 550 TMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 M YR R ++ +L +P +RG+ V+D + + SID S D Sbjct: 470 NMIYRWHPRAATYNNLPAVPIMLRGNDVADAPLIIASIDPCFSCTD 515 >UniRef50_P15689 NADH-ubiquinone oxidoreductase 49 kDa subunit n=10 Tax=cellular organisms RepID=NDUS2_PARTE Length = 400 Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 132/398 (33%), Positives = 210/398 (52%), Gaps = 18/398 (4%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +N GP HP+AHG R++LQL+GE + IG HRG+EK+ E + + +PY DR++Y Sbjct: 6 VNFGPQHPAAHGVLRLILQLNGEVVEKMDIHIGLLHRGSEKLMETKPYLQSMPYFDRLDY 65 Query: 274 LGGCVNEMPYVLAVEKLAGIT-VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 + V E Y LA+E L T ++R M EL RI +H+L I+ D+G+M+ + Sbjct: 66 VSMMVQEHAYCLAIEALLNTTNYTANFVLVRTMFDELTRILNHMLAIACHALDIGSMSSI 125 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 F+AF +R+KI + E + G RMH A++R V +L +LL + L++ L + + Sbjct: 126 FWAFEEREKIMEFYERVCGRRMHAAFYRPNEV--NLNFLSVKLLTDILEFNNNCLTTLSE 183 Query: 393 A---ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR--PYSGYENFD 447 N I K R + + K+ L++G TG R+TGI D+R Y+ Y + Sbjct: 184 MHNILTYNKIWKQRLVNIGSISYKDCLDFGLTGVMARSTGIKRDLRMDAFDTYANYYYLN 243 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM--------PEGPFKA-DHPLTTP 498 F G D Y R ++++ E+ +S+ I+ Q + + P KA + Sbjct: 244 FR-SYTGQAGDSYDRFLIRMNEMSESINIISQAIFKLTTSKNTCSPASILKALNKKKFIS 302 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 + +E LITHF S G + +N ++Q +E+ KG L SDGS YR +VR Sbjct: 303 QTYKNEYSSMEKLITHFKYWSEGFKIQSNWTYQAVESPKGEFGVTLVSDGSNKPYRCKVR 362 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P++ HLQ +P +G L++DL +G+ID V ++DR Sbjct: 363 SPAYHHLQVLPKMSKGHLLADLSALIGTIDIVFGEIDR 400 >UniRef50_B7R5K6 Hydrogenase-4 component G n=1 Tax=Thermococcus sp. AM4 RepID=B7R5K6_9EURY Length = 545 Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 158/526 (30%), Positives = 245/526 (46%), Gaps = 62/526 (11%) Query: 75 GMDERLRTHREGLPAADFSVFYHLISID-RNRDIMLKVALAENDLHVPTFTKLFPNANWY 133 G+DER P YH+ + + R ++LK+ N+L +P+ T + A+W Sbjct: 47 GVDER--------PVNMRFAMYHVFNCEAERRHVILKLTTPTNELTLPSITPVIEGASWS 98 Query: 134 ERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEME 191 ERE D+ GI F+GHP R+++P+ W +PLRKD+P +L AK Sbjct: 99 EREAMDMLGIIFEGHPEPERLILPEDWPEGVYPLRKDFPYNK------KLPPAK------ 146 Query: 192 ALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYH-HR 250 P+E R D + + LGP HP+ H L + G++IVD G+H HR Sbjct: 147 -----PKE---GRKKPRPDIIEVPLGPYHPTLHEPEYFELYVKGDKIVD-AKYRGFHIHR 197 Query: 251 GAEKMGERQSWHSYIPY-TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSEL 309 G EK+ E + + +P+ +RI + GC + Y AVE I VP+R IR ++ E+ Sbjct: 198 GMEKLAESRMTLNQVPFLAERICGICGCTHSTAYCQAVEDATNIYVPERARYIRTIMLEV 257 Query: 310 FRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP 369 R++SHLL+ +G + + R+ I D+ E ITG R IGGV D+P Sbjct: 258 ERLHSHLLWFGVACHLLGFDSGFMHLWRAREYIMDIAELITGNRKTYGINLIGGVRRDIP 317 Query: 370 RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATG 429 R + E LD K ++ LK R + V K+ E G G RA+G Sbjct: 318 EEKKRKVLELLDLAEKDSREILDNVVKMGELKERMENVGVLPKKKGREIGVVGPVARASG 377 Query: 430 IDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPF 489 ID DVR+ PY+ Y + DFE+PV G D +R +++ +E QS ++ Q L+NMPEG Sbjct: 378 IDTDVRRDHPYAAYGDLDFEVPVYKG-EDVLSRFLVRYDETFQSFSMIRQALDNMPEG-- 434 Query: 490 KADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS 549 LI ++ + + EA +G + + + + G Sbjct: 435 --------------------ELINEDYEIPGFKL-----GLGVTEAPRGEDVHVVITWGE 469 Query: 550 TMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 YR R ++ +L +P +RG+ ++D + + SID S D Sbjct: 470 NKVYRWHPRASTYNNLPAVPVMLRGNDIADAPIIIASIDPCFSCTD 515 >UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 Tax=Archaea RepID=Q64DY8_9ARCH Length = 788 Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 150/510 (29%), Positives = 246/510 (48%), Gaps = 43/510 (8%) Query: 115 ENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLR-RIMMPQTWKGHPLRKDYPARA 173 E + +P+ T L+ +AN+ ERE D FG+ F G+ ++ + ++ PLRKD+ Sbjct: 294 EAEPEIPSLTSLWESANYSERELHDFFGVKFKGNEGMKGKFLLAPDTPDTPLRKDFKLEE 353 Query: 174 TEFSPFE----------------------LTKAKQDLEMEALTFKPEEWGMKRGTENEDF 211 +++ E +DL+M A E +K +N++F Sbjct: 354 EQYTIEEGVPLTPTITPPHYMPPSSSLSYSESELEDLKMPAY-----EDVLKEAEKNDEF 408 Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + +GP+H S G R V+++ G+ I D +PD GY HR EK+ E + + +P T+R Sbjct: 409 VAF-IGPHH-SGSGHLRWVMRMKGDIIKDVIPDPGYVHRSMEKIAENRLYIQNVPLTERP 466 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + YV A+E GI VP+R IR +++EL RI + + F +G T Sbjct: 467 NISDPINMNLGYVRAIENALGIEVPERAKYIRTIMAELSRIGAFFYDMGIFPLFMGHSTG 526 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 ++F R+ + +L+ +TG R P++ GG+ D+P R+F + KRL YE Sbjct: 527 FMYSFAIREMVLELMVRMTGSRCTPSFIVPGGIRRDIPDDVLDRTRKFTTAIHKRLKKYE 586 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + N +L R + V +EA+ G G LRA+G+++DVRKA PY Y+ D+E Sbjct: 587 NIFVYNPVLISRMKEVGVLTREEAIRCGIVGPFLRASGVEYDVRKAEPYEVYDKLDWEAT 646 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLN---NMPEGPFKADHPLTTPPPKERTLQHI 508 G DC R+ ++EE++QS+ I+ Q ++ MP G ++ L + Sbjct: 647 TGDA-GDCLGRIFGRLEEMKQSVEIVRQAVDAVQEMPRGGVISEEILG-------DYKEA 698 Query: 509 ETLITHFLQVSWGP-VMPANESFQMIEATKGINSYYLTSDG-STMSYRTRVRTPSFAHLQ 566 I +L +G V+P E + EA +G Y + SDG S + YR R+ TP + +L+ Sbjct: 699 SDDIRGYLYNVYGDLVLPKGEWTSVTEAARGTVLYSIISDGESNVPYRVRIITPCWMNLR 758 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 I A +G V+D S + + DR Sbjct: 759 GIIEASKGERVADFWTVYASFGYFPPEADR 788 >UniRef50_C0SF51 NADH-ubiquinone oxidoreductase 49 kDa subunit n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SF51_PARBP Length = 447 Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 127/384 (33%), Positives = 193/384 (50%), Gaps = 35/384 (9%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +N GP HP+AHG R++L+L+GEEIV P +G HRG EK+ E +++ +PY DR++Y Sbjct: 98 VNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYMQALPYFDRLDY 157 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + NE + LAVEKL I +P+R IR M E+ RI +HL+ + + DVGA+TP Sbjct: 158 VSMMTNEQCFSLAVEKLLNIEIPERAKWIRTMFGEITRILNHLMSVLSHAMDVGALTPFL 217 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + F +R+K+ + E ++G R+H A+ R GGV D+P G LL + W + Sbjct: 218 WGFEEREKLMEFYERVSGARLHAAYIRPGGVHQDIPLG---LLDDIYQWA-------THS 267 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE-NFDFEIPV 452 A +T LK S + + + L T + A + G N + Sbjct: 268 ATASTKLKNCSPKIVSGKLEPRNRRRFLPQRLSITALAESCSVAPLFHGMSANPNLRRLR 327 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 G + Y ++VE+ + S PPP+ +++E LI Sbjct: 328 PGRIRRAYAAGPVRVEDYKIS------------------------PPPRAAMKENMEALI 363 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 HFL + G +P E++ IEA KG +L SDGS YR ++R P FAHL Sbjct: 364 HHFLLFTKGYAVPPGETYSAIEAPKGEMGVFLVSDGSERPYRCKIRAPGFAHLSCFDQIS 423 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 RG L++D + +G++D V +VDR Sbjct: 424 RGHLLADAVAIIGTMDLVFGEVDR 447 >UniRef50_B6YTW8 Hydrogenase 4, component G or formate hydrogen lyase, subunit 5 n=5 Tax=Thermococcaceae RepID=B6YTW8_THEON Length = 584 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 168/601 (27%), Positives = 264/601 (43%), Gaps = 75/601 (12%) Query: 6 AQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK 65 E A TR++LD E+ +FG V+ ++ ++RE L E+ + P+ Sbjct: 19 GDEKAKVTREYLD-----EIIEKFGEKIRDVKQAAYNQWIITVEREDLPEIVLYFLNHPE 73 Query: 66 -PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVA--LAENDLHVPT 122 L + DER + FS+ Y L + D L V L E+D + Sbjct: 74 WKETQLSSMVATDERPLNGK-------FSITYWLSVNGKAGDFYLGVRAYLPEDDPRFTS 126 Query: 123 FTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARAT----EF 176 ANWYERE ++ G+T +GHP+ RR+++P W +PLRKD+ + +F Sbjct: 127 IAAKHRGANWYEREAMEMLGLTAEGHPDPRRLVLPDDWPSCVYPLRKDFHYSNSPPGEKF 186 Query: 177 SPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGE 236 P++ K +D + + GP H + A L + GE Sbjct: 187 YPYKEPK-------------------------KDEIVVPYGPYHVALEEAAHFRLYVKGE 221 Query: 237 EIVDCVPDIGYHHRGAEKMGE-RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITV 295 I D Y HRG EK+ E R ++ +RI + GC + Y AVE GI V Sbjct: 222 TITDVDYRGFYAHRGIEKISEGRLTYDQVCFIAERICGICGCTHSTAYCQAVENAGGIEV 281 Query: 296 PDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMH 355 P+R IR ++ E+ R++SHLL VG A+ R+ + L E +TG R Sbjct: 282 PERAEYIRTIVLEIERLHSHLLNFGIVSHLVGYDYGFMKAWRIREHVMWLAERLTGNRKT 341 Query: 356 PAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEA 415 +GGV DL L+ + L + + A+ + R +GV K A Sbjct: 342 YGMLLVGGVRRDLLEYRKSLIEDVLKKIKTEFSELVDEAISTSTFVKRLEGVGVLPYKVA 401 Query: 416 LEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLR 475 EW G R +G DFDVR+ PY+ Y+ DF++PV D R ++++EE+ +S+ Sbjct: 402 KEWDVDGPLGRGSGRDFDVRRDHPYAAYKYLDFKVPVYKE-GDVLARALVRIEEVFESIW 460 Query: 476 ILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEA 535 I+EQ L+ MP G A++ KE + P +E+ M EA Sbjct: 461 IIEQALDQMPGGDILAEY-------KE--------------------IPPYSEAIGMTEA 493 Query: 536 TKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +G N +Y+ + + YR R R ++ +L +P +RG ++D + + SID S + Sbjct: 494 PRGENIHYVMTGENNKVYRYRARAATYNNLPAVPDMMRGYTIADAPLIVASIDPCYSCTE 553 Query: 596 R 596 R Sbjct: 554 R 554 >UniRef50_A7C1S4 NADH-ubiquinone oxidoreductase subunit n=3 Tax=cellular organisms RepID=A7C1S4_9GAMM Length = 380 Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 129/391 (32%), Positives = 193/391 (49%), Gaps = 37/391 (9%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 L GPNHP G + + ++L G+E+V D GY HRG EK+ E + W + RI Sbjct: 19 LYFGPNHPGIEGNYALKVRLSGDEVVGVKADAGYLHRGFEKIMEERLWIQNVALVPRI-- 76 Query: 274 LGGCVNEMP-----YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 CV + P Y AVE L G+ VP+R IRVM+ E+ RI +HL G Sbjct: 77 ---CVPDPPPMEETYARAVEMLGGLEVPERAQWIRVMMLEMSRIAAHLFIAGGTSATTGQ 133 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 + +F+ DR I DL E +TG R++ + GGV D+P G+ L + LD++ RL Sbjct: 134 YSNMFWGIADRDLILDLFEELTGARIYNMFITPGGVRRDIPDGFLDRLGQVLDFLEARLP 193 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 Y+ N + R++G+ ++AL WG TG LRA G+ FDVR+ PY YE DF Sbjct: 194 EYDDLFFDNPVFHRRAEGIGKMTQEQALAWGVTGPNLRACGLPFDVRRNDPYLVYEQLDF 253 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP--EGPFKADHPLTTPPPKERTLQ 506 +IP G D R+ ++ E+ +S +IL Q + +P +GP + P P Sbjct: 254 DIPTETG-GDVLDRIRVRRSEIIESTKILRQVIQRLPHVKGPIRCHLP--NP-------- 302 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH-L 565 ++W +P +++ EA KG +Y S G T +R VR PS H + Sbjct: 303 -----------LAWN--VPEGDAYARTEAQKGELGFYAVSTGGTKPWRVHVRGPSCMHAV 349 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Q + G+ + D+ + + S+D +VDR Sbjct: 350 QVLEKLCLGARIEDIAMIMFSLDACPPEVDR 380 >UniRef50_A1RZ50 NADH dehydrogenase (Ubiquinone) n=6 Tax=Archaea RepID=A1RZ50_THEPD Length = 404 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 132/391 (33%), Positives = 195/391 (49%), Gaps = 7/391 (1%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 +E L +GP HPS+ G R +++L G+ IV PDIGY HR EK+ E + IP Sbjct: 19 DESVYELFIGPQHPSS-GHMRFIVRLQGDVIVSVDPDIGYVHRTMEKLAEGREAIKAIPL 77 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R+ + + V A+E+L + P R +R +LSE+ RI SHL + + Sbjct: 78 LERLTIIDSHNATVGLVTAMERLLDVEPPPRALYLRTLLSEINRIASHLYGMGIAGIMLN 137 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T +AF DR+ L E +TG R+ + GGV DLP+G+ + +M +RL Sbjct: 138 HSTMFMWAFGDREVWLQLAEELTGARLTHTYSVPGGVRRDLPQGFGEKFEKAARYMERRL 197 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y + L+N + R +GV EA G G LRA+G+ +D R A Y Y++ + Sbjct: 198 QDYMRIFLENPQVVARYEGVGVLKKSEASRLGVVGPNLRASGVKYDARLADDYGAYKDLE 257 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK--ERTL 505 FE+P DC R++++VEE++QS+ I+ Q L MP+GP ++ L PPK ER L Sbjct: 258 FEVPTREE-GDCMARMLVRVEEIKQSISIIRQVLRKMPDGPILSEKYLKLLPPKTRERVL 316 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 Q F + +PA E+ E G Y++T DGS YR RV TPSF ++ Sbjct: 317 QEGR---VKFPALFASLKLPAGEAVARAEMGHGEIFYHITGDGSAKPYRLRVVTPSFRNV 373 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G D GS+D+ + DR Sbjct: 374 ILFRYLAPGHRFMDFPAIYGSLDYFPPEADR 404 >UniRef50_A1RZ40 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ40_THEPD Length = 537 Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 151/523 (28%), Positives = 247/523 (47%), Gaps = 49/523 (9%) Query: 82 THREGLPAADFS----VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERET 137 H + A D + YH R + +K+ A L P+ ++ P A++YE+E Sbjct: 30 AHLTAITAVDLQDSIELIYHFDGGGGYRHVSVKLPRANPTL--PSIAQVVPGADYYEKEV 87 Query: 138 WDLFGITFDGHPNLRRIMMPQTWKGH---PLRKDY-PARATEFSPFELTKAKQDLEMEAL 193 DLFG+ F RR ++P+ + PL KD PA + + L EA Sbjct: 88 RDLFGVNFQDGAEKRRFILPECYPPDAPPPLLKDVDPA------------SVKALVAEAP 135 Query: 194 TFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAE 253 T + + G+ E + + +GP HP+ L +DGE IV IG+ HRG E Sbjct: 136 TCQVDAVGLHAPLSPESVV-VPVGPYHPAFKEPEYFSLVVDGERIVKAFVRIGFVHRGIE 194 Query: 254 KMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRIN 313 K E +S+ I +RI + + +V AVE+L + VP R +R +++EL RI+ Sbjct: 195 KAAESRSFFRDIFLVERICGICSTSHAWCFVEAVERLLNMEVPRRAAYLRTLVAELERIH 254 Query: 314 SHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWD 373 SH L++ G T + + R+ I DL+E I+G R+H ++ IGGV D+P Sbjct: 255 SHALWLGLVGYWTGFETMFMWVWGLRETIMDLLEEISGNRVHKSFVTIGGVRRDVPDALL 314 Query: 374 RLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFD 433 R + E ++ + S ++ + + R++G+ Y +A ++ G RA G FD Sbjct: 315 RRVSERVETFRREFESLLESLSYSEEIISRTKGIGRYSLDDARKYCAVGPVRRAAGDPFD 374 Query: 434 VRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH 493 VR+ PY Y +FE+P D Y + ++V+E+ +S I++Q + MP G + Sbjct: 375 VRRIEPYGAYPEVEFEVPTSNE-GDVYNLIRVRVKEVVESASIIQQLVEKMPSG-----N 428 Query: 494 PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSY 553 P+ PPK + +P E++ IEA +G YY+ ++ + Y Sbjct: 429 PV---PPK-----------------PFMGTVPEGEAYSRIEAPRGELFYYVKANNTHNPY 468 Query: 554 RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R +VRTP+ A++Q + G +SD V + SID S +DR Sbjct: 469 RVKVRTPTLANIQLAAKILEGQTLSDFPVVVTSIDPCFSCMDR 511 >UniRef50_A8MBT0 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MBT0_CALMQ Length = 424 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 129/403 (32%), Positives = 206/403 (51%), Gaps = 4/403 (0%) Query: 195 FKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEK 254 F P M D + +GP HP + G RI+L+L G+ IV+ VPD GY HR EK Sbjct: 25 FLPIPKNMVEEAYKSDEYLVLIGPAHPGS-GHMRIILRLKGDYIVEAVPDPGYVHRSVEK 83 Query: 255 MGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINS 314 + E + + IP +R + + YV A+E+L + VP R +RV++ EL RI Sbjct: 84 LAETRLFVHNIPLVERPTIAESSIMDHGYVRAIEELGQLDVPPRAQYLRVIMDELSRIGD 143 Query: 315 HLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDR 374 HL +G T + F R+ I D + +TG R+ ++ GV D+ R Sbjct: 144 HLYDTGILAVFLGHSTGYMWGFGLRELIVDALARMTGARITVSFVIPSGVRWDVHPDVLR 203 Query: 375 LLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDV 434 + ++ K++ +N + R + V + ++ G G LRA G+++D Sbjct: 204 YIYNMTFFIEKKIDELGTIFTKNPVTVSRMKDVGVLTKDQCIKLGAVGPFLRACGVEYDN 263 Query: 435 RKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHP 494 R+ARPY+ Y+ ++EIPV D Y+R +++VEE+RQSL I+ Q + N+PEGP + Sbjct: 264 RRARPYAVYDQLEWEIPVADE-GDAYSRFLVRVEEIRQSLNIIRQAVKNIPEGPVIGNKL 322 Query: 495 LTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDG-STMSY 553 +T PPKER + + + + ++ G +P E+ + EA +G Y L SDG S + Y Sbjct: 323 MTRVPPKERE-KVAKDIRNYLFRLLIGLTLPEGEATTLTEAARGTLLYSLVSDGKSNVPY 381 Query: 554 RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R R+ TPS+ +L+ ++RG + DL GS + + DR Sbjct: 382 RLRMITPSWYNLKPFMESLRGYRLMDLPAIYGSWGYFPPEADR 424 >UniRef50_B3TC54 Putative Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC54_9ZZZZ Length = 363 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 123/391 (31%), Positives = 191/391 (48%), Gaps = 31/391 (7%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 E + LN GP HP G FR+++ +DG+ V P IGY HRG EK+ E + + IP Sbjct: 2 TEGLVTLNWGPQHPVT-GHFRMIMTIDGDLCVGAEPTIGYTHRGIEKLLENRQFLVGIPM 60 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R + Y AVE L P R +R ++SE+ R++SHL ++ + +G Sbjct: 61 IERFNMTDTAPMSLSYTKAVESLMDFEAPPRAQYLRTIISEICRLSSHLYNLALYTVALG 120 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 TP +A DR+ L E ++G R+ + GGV D+P + + + + RL Sbjct: 121 MYTPFMWAIGDREHFLKLGEILSGVRLAYNYPIPGGVYKDMPPDFPHQATKTIKYFRNRL 180 Query: 388 -ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 Y+K T +K R + V +EAL+WG TG LRA+G+ D+RK PY Y Sbjct: 181 LKDYKKFIYDTTAVKSRGEDVGIMSKEEALKWGVTGPVLRASGVKKDMRKVEPYGAYNEV 240 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 DF++ + D + R++++ EE+ QSL ILEQC+ ++P G + Sbjct: 241 DFDV-ITKNEGDSHARMLVRYEEMEQSLNILEQCIKDIPAGDY----------------- 282 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKG-INSYYLTSDGSTMSYRTRVRTPSFAHL 565 F +V P +PA E+F +EA +G + Y + M YRT+ PSF + Sbjct: 283 --------FTKVR--PAVPAGETFTRVEAARGEVGVYLFNKETRNMPYRTKFSNPSFKNG 332 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P GS+++D SID ++DR Sbjct: 333 YVLPKLFVGSVIADCAAIYHSIDVWALEMDR 363 >UniRef50_D1LDT9 NADH dehydrogenase subunit 7 (Fragment) n=2 Tax=Euplotidae RepID=D1LDT9_EUPCR Length = 462 Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 135/417 (32%), Positives = 210/417 (50%), Gaps = 30/417 (7%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 + + + + FM +N GP HP++HG R VLQL+GE I +IG+ HRG EK+ E++++ Sbjct: 53 LNKLEQTQTFM-MNFGPQHPASHGVLRFVLQLEGEYIRHADANIGFLHRGTEKLIEQRTY 111 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNV-IRVMLSELFRINSHLLYIS 320 +PY DR++Y+ E Y LA+E L G + V +R + EL R+ +H L IS Sbjct: 112 LKSLPYFDRLDYVSMMSQEHAYCLAIENLLGSSTFTSFFVQVRALFDELTRLMNHFLGIS 171 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL----- 375 T DVG M+P F+AF +R+++ + E ++G RMH A++R +DL W L Sbjct: 172 THSLDVGNMSPAFWAFEERERLMEFYERVSGARMHAAFYR----PNDLD--WTGLNYQFF 225 Query: 376 --LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFD 433 L FL+ K + N I + R + + + +G R+ G D Sbjct: 226 IDLLFFLNNTYKSITEMFVILATNNIWRSRLVRIGVVDNAQVPLFAASGVVSRSAGFKKD 285 Query: 434 VR--KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM------- 484 +R K YS Y G + DCY R ++++ E+ +S+ I+ Q ++N+ Sbjct: 286 LRILKTSTYSYYWFLKLR-SFLGKMGDCYDRFIIRIREMLESVFIIYQIISNLLVVFEST 344 Query: 485 PEGPFKAD-----HPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGI 539 PF + T + +E LITHF S G +PA +Q +EA KG Sbjct: 345 TALPFWYNTESYVSATFTKSQFNKKSTSMEALITHFKHYSEGIKVPAGLVYQSVEAPKGE 404 Query: 540 NSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 L SDGS+ +R ++RTP++ HLQ + + IRG +D+I LGS D V +V R Sbjct: 405 FGVSLISDGSSKPFRCKIRTPAYHHLQFMSSQIRGHFFADMITILGSQDIVFGEVIR 461 >UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET0_ARCPR Length = 709 Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 149/510 (29%), Positives = 252/510 (49%), Gaps = 41/510 (8%) Query: 92 FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL 151 F V + L + + + + L ++ + V + + +FP++++ ERE + FG+ F+G+ + Sbjct: 236 FIVEFTLHNYENYKLVTLAKRISRKNPKVESLSDIFPSSDYMEREMHEFFGVVFEGNKWM 295 Query: 152 -RRIMMPQTWKGHPLRKDYPARAT---EFSPFELTKAKQDLEMEALTFKPEEWGMKRGTE 207 R ++ + PLRKD+ + E PF L +L++ L P+E+ +G E Sbjct: 296 GRNFLLDVSTPKFPLRKDFRLESQSIEEERPF-LQDFDGNLDVTKL---PDEF--VKGDE 349 Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 L +GP HP + G R++++LDG+ I D +PD GY HRG EK+ E + + IP Sbjct: 350 ----YILVVGPQHPGS-GHMRLIVKLDGDIIKDVIPDPGYVHRGVEKIAESRIYIKNIPL 404 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R ++ YV A+E+ GI V +R IR +L+EL RI +HL +G Sbjct: 405 VERPCITDFANYDICYVKAIEEALGIEVSERAKYIRTILAELCRIGTHLYDAGILSIFLG 464 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T +AF R+ + + + +TG R+ ++ GGV D+ R +RE + M +RL Sbjct: 465 HSTGFMWAFGLREFVCEALTILTGARVTGSFIVPGGVRWDVSDEKLRRVREIVLAMRRRL 524 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 +EK ++N + R + V K+A E G G LRA+ + D R + Y Y+ D Sbjct: 525 EKFEKMFVKNPTVVARLENVGILSKKDAKELGIVGPFLRASNVRHDWR-LKGYEAYDCVD 583 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 +++ V D Y R++++VEE+ QS++I++Q + ++P G K D T Sbjct: 584 WDV-VTAEEGDSYARLLVRVEEINQSIKIIDQLVRDLPSGETKVDMWKLT---------- 632 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDG-STMSYRTRVRTPSFAHLQ 566 V+P E +E +G + SDG ST YR R+ TPS+ +L+ Sbjct: 633 -------------DLVLPLGEFVSCVEGARGTIYMSIVSDGESTTPYRFRIVTPSWYNLR 679 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 A +G ++DL GS + + DR Sbjct: 680 GFVEACKGERLADLQAIYGSFGYFPPEADR 709 >UniRef50_C7DI97 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI97_9EURY Length = 387 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 116/392 (29%), Positives = 195/392 (49%), Gaps = 25/392 (6%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 +EN M +N+GP HPS HG R+++ +DG+ I + IG+ HRG EK+ E + + Sbjct: 20 SENMPVMRINVGPIHPSTHGVLRLLVDVDGDTIENMTCHIGFLHRGVEKLMENRMYMQSP 79 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 YT++++Y+ + YV VE V + RV++ E RI SHL +I D Sbjct: 80 SYTEKLDYVAPLGWDDLYVHTVELALQKEVKETAKYARVIIMEFQRIASHLFFIGALCND 139 Query: 326 VGAMTPVFF-AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 +G M +F AF +R + +E I+G RM R+GG+ LP + + +++ Sbjct: 140 IGQMFTMFMWAFRERDAVLKFLEDISGSRMFYVNMRVGGLMRPLPDDFYDRAYKLTEYIE 199 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 ++ Y+ N+I R++G+ KEA+++G +G LRA+G+++DVRK PY Y+ Sbjct: 200 YKVKGYKDVIDDNSIFMERTKGIGTISKKEAIDFGLSGPNLRASGVEYDVRKEYPYYAYD 259 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 F++P D Y R ++ EE+ +S++I+ Q L+ MP P+ P+ + Sbjct: 260 RLKFKVPTSNA-GDGYARYKMRYEEIFESIKIIRQALDKMPRDNDVVGLPIKLIGPEAKP 318 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 + +I H E +G Y+ D YR R+R+P F Sbjct: 319 ----DIVINHH------------------ELPRGEGIIYMVPDKQK-PYRIRLRSPVFIS 355 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 L + +G+ +DL G++D VM++VDR Sbjct: 356 LSALEHICKGAKFADLFSIAGTLDVVMAEVDR 387 >UniRef50_B5YKR2 Hydrogenase-4 component G n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKR2_THEYD Length = 541 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 151/555 (27%), Positives = 260/555 (46%), Gaps = 61/555 (10%) Query: 45 VVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRN 104 +V+ K Q+ EV L + L + ++++ + + + F+ LI D + Sbjct: 23 IVYSKPSQIKEVAKLLVMQGARFAHLTAIDFINQKNQI--------ELNYFFSLI--DDS 72 Query: 105 RDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW--KG 162 ++++K+ L ++L + + +++ P W ERE DLFGI F+GHP+ RR+++P W + Sbjct: 73 MNVIVKIPLEASELSISSISEIIPAVIWSERECNDLFGINFEGHPDPRRLVLPDNWPQEV 132 Query: 163 HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS 222 HPLRK++ + ++KQ ++ KPEE + +GP +PS Sbjct: 133 HPLRKNFSYNSKP------PESKQPAPLK----KPEEGKT----------VIPIGPFYPS 172 Query: 223 AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY-TDRIEYLGGCVNEM 281 L +DGEEI D Y HRG EK+ E + IP+ +RI + G V+ Sbjct: 173 LEEPAYFRLIVDGEEIADFDYRGFYVHRGIEKLAESVLNYQQIPFLAERICGICGFVHSC 232 Query: 282 PYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQK 341 Y AVEK AGI +P R IR + EL R++SHLL++ VG T A+ R+ Sbjct: 233 AYCQAVEKAAGIEIPLRAKFIRSLFLELERLHSHLLWVGLAAHIVGFDTLFMQAWRIREP 292 Query: 342 IYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILK 401 + + E ITG R +GGV D+ + + + + + K + + L + +++ Sbjct: 293 VMYICEIITGNRKTYGINIVGGVTIDVHNQHLKDIDKVISQIEKEVRELREIILDDEVIQ 352 Query: 402 GRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYT 461 R + V +A ++ G R +GI+ D+R PY+ Y + IP+ D + Sbjct: 353 LRFKNVGVLKYDDAKKYCVCGPVARGSGINIDMRTNFPYAAYPMLNIRIPLNKS-GDVWA 411 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWG 521 R ++++EE+ S+ I+ Q L N+PEGP + Sbjct: 412 RTIVRLEEILISINIIRQILENIPEGP---------------------------TSIKIS 444 Query: 522 PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLI 581 + P E+ IEA +G +Y+ + YR VR PS+ + Q + ++G+ ++D Sbjct: 445 KIEPWKEAVSYIEAPRGQLFHYVMTGPEGRPYRWSVRAPSYQNYQALSVMLKGASIADAP 504 Query: 582 VYLGSIDFVMSDVDR 596 + +GSID S +R Sbjct: 505 LIIGSIDPCFSCTER 519 >UniRef50_A9A347 NADH dehydrogenase (Quinone) n=3 Tax=Thaumarchaeota RepID=A9A347_NITMS Length = 378 Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 124/397 (31%), Positives = 200/397 (50%), Gaps = 27/397 (6%) Query: 201 GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 G+ +E M LN+GP HP + G RIV+Q+DG+ IV C PD GY HRG EKM E ++ Sbjct: 8 GLALKKVDERIMTLNVGPQHPGS-GHMRIVVQIDGDYIVACDPDPGYVHRGEEKMAEYRN 66 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 320 + + +P+ +R C PYVL E++ GI VP+R +RV+ SEL R + +++ Sbjct: 67 YITNVPHLERPVIHDSCNVLYPYVLGAEEILGIEVPERAKYVRVICSELNRCIYTMYWLA 126 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 + +G T + DR+ + DL+E ++G R+ A F GGV +DLP ++ + + Sbjct: 127 IYGIFLGHSTMFMWPAGDRELLIDLMEKVSGARVTHAHFIPGGVRNDLPANFEDVCLRQV 186 Query: 381 DWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPY 440 ++ KR+ Y N IL R+Q + A+ +GTTG+ LRA+G+D+D+R PY Sbjct: 187 NYFEKRIKEYAAVFYDNPILISRTQDTGVLSRENAIRYGTTGSVLRASGVDYDLRVKAPY 246 Query: 441 SGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE-GPFKADHPLTTPP 499 Y+ D V D Y R + ++ +S I+ Q L MP+ G + P Sbjct: 247 DVYDELDVHTNVLKE-GDSYARSKVPWLDMMESCNIIRQALQKMPKSGSVRTK---LKPN 302 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 PK + GP ++ +E+ +G Y+ SDG T YR ++ Sbjct: 303 PKTK-----------------GPAT----VYKRVESGRGSLGCYIVSDGKTEPYRVKMSV 341 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PSF +L +P + G + ++ S+++ + DR Sbjct: 342 PSFRNLLAMPNLLIGEKLGNMPSVYWSLNYWPVEADR 378 >UniRef50_A9BJL6 NADH dehydrogenase (Quinone) n=3 Tax=Thermotogaceae RepID=A9BJL6_PETMO Length = 369 Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 123/385 (31%), Positives = 194/385 (50%), Gaps = 23/385 (5%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 L LGPNHP HG F + + +DG+ IV P G HRG EK+ ER+ W + + RI Sbjct: 6 LYLGPNHPGMHGNFSVHMYVDGDTIVRARPMPGMLHRGFEKLMERRLWMNNLALIPRICV 65 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 +NEM Y +A+E+L GI VP++ + IR+++ EL RI +HL+ + VG T Sbjct: 66 PEPDINEMVYAMAIEELTGIEVPEKAHWIRMIILELARIANHLMSLGGIGGPVGLYTGPN 125 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + DR I D+ E ITG R++ + GGV DL ++ FLD++ RL YE Sbjct: 126 WGLADRDLILDIFEEITGARIYHMYIVPGGVRKDLREETIEKIKSFLDYLENRLPEYEDL 185 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR-ATGIDFDVRKARPYSGYENFDFEIPV 452 L+N++ + R++ A+ E G TG G+R A G +D+RK PY+ Y+ +F +P Sbjct: 186 ILKNSLFQRRTKDKLLLPAEVVWELGVTGIGMRSAVGEAYDIRKVDPYARYDQVEFYVPT 245 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 SD YTRV K E QS++I+ Q L MP+ + I Sbjct: 246 -ANYSDGYTRVYFKYLETYQSIKIIRQVLEKMPQK------------------GKVWNKI 286 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH-LQQIPAA 571 ++ + W +P + + +E +G YY+ S+G YR VR S+ L + Sbjct: 287 SNGSALRWR--VPKGQVYTHVECARGEYGYYMVSEGEDKPYRVAVRGASYPQGLLGVEKY 344 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 + G+ + D +++ ++ ++DR Sbjct: 345 LPGTRIEDAALWMDTMGVCPPEIDR 369 >UniRef50_A1RWL3 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=2 Tax=Archaea RepID=A1RWL3_THEPD Length = 567 Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 144/513 (28%), Positives = 232/513 (45%), Gaps = 59/513 (11%) Query: 95 FYHLISIDRNRD------IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGH 148 Y++ SI+ + +++ + +D + T P A+WYERE DL G+ + H Sbjct: 72 LYYVFSIEEGYEDGKKPWVVVVTNIPPHDTKFSSVTPKIPAASWYEREVRDLLGLVPENH 131 Query: 149 PNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGT 206 P+ RR+++P W HPLRK++ TE P K + F+P Sbjct: 132 PDPRRLVLPDDWPEGVHPLRKEF--TYTERPPSVARKCE---------FRP-------SV 173 Query: 207 ENEDFMFLNLGPNHPSAH--GAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 E E M + +GP H A G FR+ L DGE++VD + Y HRG EK+ E + ++ Sbjct: 174 EGEGIMQVPIGPVHAVADEPGQFRVFL--DGEKVVDVDYRMFYVHRGIEKLAESRLTYNQ 231 Query: 265 IPY-TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI 323 +P+ +RI + G + Y AVE+ GI VP+R IR ++ E+ R++SHLL + Sbjct: 232 VPFIAERICGICGYAHSCAYCQAVEQALGIEVPERALYIRTLMLEVERLHSHLLNLGLAC 291 Query: 324 QDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWM 383 G F R+K+ + E +TG R +GGV D+ + E L + Sbjct: 292 HLAGFDWGFMAFFKAREKVMYMAELLTGGRKTYGMNVVGGVRRDITEDRAKKALEILKEV 351 Query: 384 PKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 K + A L + L R++ V A + G R + I D RK PY+ Y Sbjct: 352 EKEYKAVLDAVLSTSTLVSRAKDVGVLPRDVARKVSVVGPVARGSSIKRDTRKDHPYAAY 411 Query: 444 ENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKER 503 DF++PV D R+ ++ EE +++ I+ Q L NMP GP +A+ Sbjct: 412 SEVDFKVPVHSE-GDVLARLSVRAEETFETISIIRQVLENMPGGPIQAE----------- 459 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFA 563 + + P +EA +G + +++ + + YR RVR ++ Sbjct: 460 --------VKEY--------RPYARGLGYVEAPRGEDVHFVITGPHSKVYRWRVRASTYN 503 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + IP RG ++DL + +GSID S +R Sbjct: 504 NWPAIPYMCRGYTLADLPLIIGSIDPCYSCTER 536 >UniRef50_B3T914 Putative Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=2 Tax=environmental samples RepID=B3T914_9ARCH Length = 384 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 118/396 (29%), Positives = 203/396 (51%), Gaps = 26/396 (6%) Query: 201 GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 G++ ++ M LN+GP HP + G RI+L++DG+ IV C PD GY HRG EKM E ++ Sbjct: 15 GLQLEKVDDRIMTLNVGPQHPGS-GHMRIILKVDGDYIVHCDPDPGYVHRGEEKMAEYRN 73 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 320 + + IP+ +R C PY L VE+L G+ VP+R IRV+ +EL R +++ Sbjct: 74 YITNIPHLERPVIHDSCNILYPYCLGVEELLGLEVPERAKYIRVIAAELNRCVYTQYWLA 133 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 + +G T + DR+ + DL++ +TG R+ ++F GGV +D+P ++ + + Sbjct: 134 IYGIFLGHSTMFMWPMGDRELVIDLLDKMTGARVTHSYFVPGGVRNDIPPNFEDVCLRQV 193 Query: 381 DWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPY 440 ++ KRL Y N IL R++ ++A++ GTTG+ LRA+G+DFD+RK PY Sbjct: 194 NYFEKRLKEYADMFYDNPILISRTKDTGILSREDAIKLGTTGSVLRASGVDFDIRKKEPY 253 Query: 441 SGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPP 500 YE DF+ V D Y R + ++ +S RI+ L M P Sbjct: 254 DVYEELDFQTNVLKE-GDSYARSKIPWLDMFESCRIIRDALKKM---------------P 297 Query: 501 KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP 560 K +++ +++ P E ++ +E+ +G ++ S G YR ++ Sbjct: 298 KSGSVR---------VKLKPNPKGGDTEVYRRVESGRGSLGMHIISRGKPQPYRLKISVG 348 Query: 561 SFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SF +L +P + G ++ ++ S+++ + DR Sbjct: 349 SFRNLIAMPHLLTGEMLGNMPAVYWSLNYWPVEADR 384 >UniRef50_Q2RXM4 NADH-ubiquinone oxidoreductase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM4_RHORT Length = 561 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 134/484 (27%), Positives = 222/484 (45%), Gaps = 47/484 (9%) Query: 116 NDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGH--PLRKDYPARA 173 D VPT T L P A+W+ERE +D+ G+ +GHPN RR+++ + W P+RKD+P Sbjct: 93 KDPKVPTLTDLIPGADWHERENYDMLGVVAEGHPNPRRLLLSEDWPEDLFPMRKDFPH-- 150 Query: 174 TEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQL 233 +F P + K L G E++ +++GP P+ L Sbjct: 151 -DFKPPKAEKITTPLRDPL------------GNESK-ATIISVGPFFPTLDEPAYFRLFC 196 Query: 234 DGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY-TDRIEYLGGCVNEMPYVLAVEKLAG 292 +GEEI+ + HRG EK+ + ++ +P+ +R+ + G V+ Y +AVE AG Sbjct: 197 EGEEIIGSDYRGFFSHRGIEKLSDTVLDYNQVPFMAERVCGICGFVHSACYCMAVEDAAG 256 Query: 293 ITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGF 352 I +P R IR ++ EL R++SHLL++ +G T + ++ R+ I LVE ITG Sbjct: 257 IEIPPRAKYIRSIMMELERLHSHLLWLGLAGHYLGFDTVLMQSWRIREPIMWLVEEITGN 316 Query: 353 RMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGA 412 R +GGV DL + + + A + LK R V Sbjct: 317 RKTYGMNLVGGVRRDLDSAICDKIMAAVTKIGIECEELISAVAGDESLKMRMVKVGVLSH 376 Query: 413 KEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQ 472 ++A G RA+G+ D R PY+ + + DF+ G D + R +++V+E+R Sbjct: 377 EDARGICVVGPTARASGVHIDARADYPYAAFPDLDFKPSFHEG-GDIWARTLVRVDEVRS 435 Query: 473 SLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQM 532 S+ +++Q + +PEG A +GP+ E + + Sbjct: 436 SVDLIKQMITKLPEGEIMA---------------------------GFGPIPAWREGYGI 468 Query: 533 IEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMS 592 EA +G +Y+ + YR RVR ++ LQ +P ++G + D + +GSID S Sbjct: 469 AEAPRGECVHYVQTGKDNRPYRWRVRAATYPQLQAVPLMLKGMSIGDFPIIIGSIDPCFS 528 Query: 593 DVDR 596 +R Sbjct: 529 CTER 532 >UniRef50_A1ASR5 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR5_PELPD Length = 557 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 143/511 (27%), Positives = 228/511 (44%), Gaps = 57/511 (11%) Query: 94 VFYHLISIDRNRDIM-LKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLR 152 + +H + D+ + + + L + + + + + P ANW ERE DL GI GHP + Sbjct: 68 LVFHQFAFDKEKILFSIICQLPGENPRIDSISGIIPAANWAERELKDLLGIEPVGHPYPK 127 Query: 153 RIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENED 210 R+++P W HPLRKD+ A PE + +R + ++ Sbjct: 128 RLVLPDAWPDGHHPLRKDF----------------------AWNKIPEGYDEEREFDFDE 165 Query: 211 ----FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 + GP HP+ L +DGE + C HRG EK+ E ++ +P Sbjct: 166 TPPGCTAVPFGPFHPTLDEPEHFRLYVDGEFVRGCEYRGFMVHRGIEKLSESVLGYNDVP 225 Query: 267 Y-TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 +RI + GCV+ + + AVE AG+ VP R IR ++ E+ R++SH +++ Sbjct: 226 MMAERICGICGCVHSLAFCQAVENGAGVIVPPRAEFIRTIMLEIERLHSHPMWVGLACHL 285 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 VG T A+ R+ I L E ITG R IGGV D R LD + Sbjct: 286 VGFDTLFMQAWRIREPIMWLAEKITGNRKTYGLGIIGGVRWDFTPELIAETRAVLDKLES 345 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 A ++ + R+ GV E G G R G+D D R+ PY+ Y+ Sbjct: 346 EWRQVVAAVSKDKNIMARTSGVGMADKALCKEMGLVGPVARGGGVDIDARRDHPYAAYDR 405 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 DF++ + +D + RV++++ E+ +S+ I+ QC + MP+GP AD +TT P R Sbjct: 406 VDFKV-ITHNTADVWGRVVVRMLEVFESINIIRQCFDKMPQGPLVAD--ITTELPAGRV- 461 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 + IEA +G + ++ + R R R P++ +L Sbjct: 462 -----------------------GYTSIEAPRGESHHFAITGDDNRPRRWRARAPTYQNL 498 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Q IPA I+ ++D+ + LG ID MS DR Sbjct: 499 QGIPAMIKDQRIADMQISLGGIDPCMSCTDR 529 >UniRef50_B9L625 NADH-ubiquinone oxidoreductase n=3 Tax=Epsilonproteobacteria RepID=B9L625_NAUPA Length = 549 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 142/511 (27%), Positives = 237/511 (46%), Gaps = 30/511 (5%) Query: 92 FSVFYHLISIDRNRDIMLKVALAEN--DLHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 V Y L + +++ LKV + + + + + T L P+ANW+E E + FG+ F GHP Sbjct: 63 IEVNYFLEDLFGKKNVWLKVDIERDLENCEIDSITPLMPSANWHELEAYSTFGVKFKGHP 122 Query: 150 NLRRIMMPQTWKGH-PLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTEN 208 +LR ++ + + G P RKD+ +A E + L + D+ E E K G E Sbjct: 123 DLRYFLISRDYYGKFPFRKDFDWKAHEEN---LIQNINDITEEYFEEYEEH-EEKLGHEG 178 Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 + LN GP HP A G R+ + +GE I PDIGY R E + ER+ + I Sbjct: 179 SRTV-LNWGPTHP-ASGPIRLKVYTNGENIEKIEPDIGYVWRALEHLAERKDFIGTIVAV 236 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +RI ++ + Y AVE++AG + + +RV+L E RI SHL+ + F +G Sbjct: 237 ERICFMDNPNPMICYSQAVEEIAGKEITEFAKYMRVILGETGRIASHLISLGGFFGTMGL 296 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP--RGWDRLLREFLDWMPKR 386 T + + R+ D++E +G R+ A GGV + L + W + + + Sbjct: 297 HTFMMWCLDIREYFLDVLEDYSGARIATACVEPGGVRYPLNDYKAWFEGINKAIKKFEDT 356 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 A ++N ++ R++G + + E+ G RA+G DVR PY+ Y+ Sbjct: 357 KADITDIFMKNPLMNTRAKGNGVFTLDDVAEYYLAGPIARASGAKIDVRIDEPYAAYDKL 416 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 + E D R+ + +EL Q++ +++Q + + EG + PK+ L Sbjct: 417 EMEYATCEN-GDARDRLYIIFKELEQAMDLIKQAMAKIEEGIEAGEM-----DPKKDHL- 469 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKG-INSYYLTSDGSTMSYRTRVRTPSFAHL 565 V MPA E+ IE +G I + +T + ST YR +++ PS H Sbjct: 470 -----------VKMPKRMPAGEAVSRIEWARGEILMHLVTQEKSTSPYRLKIKAPSVNHT 518 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + +RG +SD+ + GS+ D+DR Sbjct: 519 MMLDKLLRGKTLSDIPLLYGSMHICQGDLDR 549 >UniRef50_A1AUU6 Ech hydrogenase subunit E n=3 Tax=Bacteria RepID=A1AUU6_PELPD Length = 409 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 107/381 (28%), Positives = 191/381 (50%), Gaps = 28/381 (7%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 +GP HP+ + + GE+IV +GY+HRG EK E +S+ + +RI + Sbjct: 8 IGPQHPALKEPANFSITVTGEKIVTTSMRLGYNHRGIEKACEERSYLQCLYLLERICGIC 67 Query: 276 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 + Y+ AVE++AG+T+P R N IR ++ EL RI+SHLL++ ++G T + ++ Sbjct: 68 SHTHSTAYIQAVEEIAGLTIPPRANYIRSLVGELERIHSHLLWLGVAGHEIGFDTLLMYS 127 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 + DR+ + D++ + G R++ +GGV D+ ++R ++ + +R Y + A Sbjct: 128 WRDRELVMDILAELGGNRVNYGINTLGGVRRDITPEQIEMIRNSVNTLEERTKYYIEVAT 187 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGG 455 + L R GV ++AL G LRA+ +D D+R+ PY+ Y + DF + + Sbjct: 188 EEPTLAARLAGVGYLSHEDALLLSAVGPTLRASNVDRDIRRDDPYAAYGSLDFRV-ITDD 246 Query: 456 VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHF 515 D Y R +++V EL +S R++ Q LN +PEG P Sbjct: 247 HCDVYGRTLVRVGELMESFRMIRQILNELPEGEVSVKAPRK------------------- 287 Query: 516 LQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGS 575 +PA E+ EA +G +Y+ ++G+ R +VR +FA++Q + + + Sbjct: 288 --------IPAGEACSRYEAPRGECFHYIRANGTDKPERVKVRASTFANIQAVAKMMENN 339 Query: 576 LVSDLIVYLGSIDFVMSDVDR 596 ++D+ + + +ID S DR Sbjct: 340 NLADVPIIVAAIDPCFSCADR 360 >UniRef50_C6WGH3 NADH dehydrogenase (Quinone) n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WGH3_ACTMD Length = 358 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 115/385 (29%), Positives = 185/385 (48%), Gaps = 46/385 (11%) Query: 213 FLNLGPNHPSAHGAFRIVLQL-DGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 ++LGP HPSAHGA+R+ L + D E I P +G+ HRGAEK+ E + + + +R Sbjct: 19 VVDLGPLHPSAHGAYRLRLTVRDDEVITSAEPLVGHLHRGAEKLFEVRDYRQVLTLANRH 78 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 ++L NE+ LAVE++ G+ VP R +R +L EL R+ +HL++++ V A Sbjct: 79 DWLAAFCNELAVALAVERMTGMDVPPRAQWLRALLCELNRVMAHLVFLAPLTDPVAAA-- 136 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 R+ + ++E +G R+H RIGG+ D+P GW + LD Sbjct: 137 -----RGREAVQAVLEEASGGRIHFMANRIGGLREDVPAGWAERVAGALD---------- 181 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 A++ + G+ +AL G TG RA+G+D D+R+ P Y D Sbjct: 182 --AVEVPEVPTGLAGLGVLSRADALARGVTGPIGRASGVDLDLRRDDPLPAYRELDVRPS 239 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 V G D + RV V++L Q++ + +CL +P GP P P+ Sbjct: 240 VRDG-GDAHARVACMVDDLAQAVALARECLRRLPGGPVNLRLPKAVKAPE---------- 288 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 + +EA G++ +L S G +R ++RTPSF ++Q + A Sbjct: 289 ---------------GSVYTRVEAPLGVSGVHLASRGEKTPWRLKLRTPSFNNVQALSAL 333 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 + G+ V+ L + LGS V+ D+DR Sbjct: 334 LPGTPVAQLPLVLGSFAVVVGDIDR 358 >UniRef50_C5A3D4 Formate hydrogenlyase I subunit F (Mhy1F) n=2 Tax=Thermococcus RepID=C5A3D4_THEGJ Length = 601 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 142/503 (28%), Positives = 221/503 (43%), Gaps = 55/503 (10%) Query: 100 SIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQT 159 ++D N + LK + +D P+ P A W ERE DL G GHP+ RR+++P+ Sbjct: 118 NMDENYWVFLKAYMPADDPSFPSVAAKLPAALWIEREVKDLLGFNPVGHPDPRRLILPED 177 Query: 160 WKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLG 217 W +PLRKD R SP K + E T P +G Sbjct: 178 WPEGVYPLRKDMDYR---HSPMAEVKTEYRETPEGTTLVP------------------MG 216 Query: 218 PNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE-RQSWHSYIPYTDRIEYLGG 276 P H L + GEEIVD Y HRG EK GE R +++ + +RI + G Sbjct: 217 PVHAGIEEPAHFRLFVKGEEIVDVDYRGFYSHRGIEKTGEGRLTYNQVLFLAERICGICG 276 Query: 277 CVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAF 336 + + Y +AVE+LA + +PDR IR ++ EL RI++HLL++ VG T A+ Sbjct: 277 YQHSVSYAMAVERLADVDIPDRARYIRTLMLELERIHNHLLWVGIAAHLVGYDTGFMHAW 336 Query: 337 TDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQ 396 R+ + LVE +TG R +GGV D+ + + + + + + AL Sbjct: 337 RIREPVMWLVERLTGNRKQYGMNIVGGVRRDILDYRKEEILKVVKQIREETKKFLDIALN 396 Query: 397 NTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR---KARPYSGYENFDFEIPVG 453 R++GV K A + G RA+G D R + Y DF++PV Sbjct: 397 TNTFIKRAEGVGILPYKVAKAYSVLGPTARASGRRIDTRLDQATKTAMAYNEVDFKVPVY 456 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D RV+++++EL +SL I+EQ ++ MP G Sbjct: 457 KE-GDVLARVLVRMDELFESLWIVEQLIDQMPGGD------------------------- 490 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 + V G + E+ EA +G +Y+ + YR +VR P++ +L +P ++ Sbjct: 491 --IMVPIGDLPEYEEALGFTEAHRGEVVHYVMTGEKNKVYRWKVRAPTYNNLPAVPEMLK 548 Query: 574 GSLVSDLIVYLGSIDFVMSDVDR 596 G V+D + + SID S +R Sbjct: 549 GYHVADAPLIIASIDPCYSCTER 571 >UniRef50_A4WMP9 NADH dehydrogenase (Ubiquinone) n=5 Tax=Thermoproteaceae RepID=A4WMP9_PYRAR Length = 407 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 119/409 (29%), Positives = 206/409 (50%), Gaps = 12/409 (2%) Query: 189 EMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYH 248 E L K E+ KR + + GP HPS+ G R ++++DG+ +V+ PD GY Sbjct: 10 EQYGLVLKEEQLEGKR-----RILDIFWGPQHPSS-GHTRFIVEVDGDIVVNVTPDPGYV 63 Query: 249 HRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSE 308 HR EK+GE + W IP +R+ Y +AVE++A + V R +RV+++E Sbjct: 64 HRTMEKLGETRHWIQNIPLFERLSLPDAINVTWAYAMAVERVAKLDVSPRAQYLRVIMAE 123 Query: 309 LFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDL 368 L RI++HL + +G+ T + F R+ + L ++G R P W GGV Sbjct: 124 LSRISTHLYDLGLHAIMIGSSTGFMWGFGLRELLVQLWAMVSGSRTTPTWVLPGGVRTAP 183 Query: 369 PRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRAT 428 P + + FLD++ K++ + + ++N + R + V ++A TG G R + Sbjct: 184 PDAFYEQTKGFLDYLEKKIDEFVRLVVKNPVGYYRLKDVGYLSKEDAARLMATGPGARGS 243 Query: 429 GIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EG 487 GID+D R+ Y Y+ F++++ V D R M+++ E++QS +I+ Q L+ +P +G Sbjct: 244 GIDWDARRVYKYGIYDEFEWDVCVEDA-GDSLARTMVRICEIQQSAKIIRQALDRVPKDG 302 Query: 488 PFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD 547 P + L PPK+R + +I L + ++P E + E +G +++ D Sbjct: 303 PLVGEAVLHRIPPKQR--EKANEIIR--LGALYTTMLPQGEGVGVTEGGRGRYFFHVFGD 358 Query: 548 GSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G+ YR R+ TPS+ +L+ + A G+ + DL GS + + DR Sbjct: 359 GTEKPYRVRISTPSWQNLRAMIRAFIGARLMDLPAIYGSFGYFPPEQDR 407 >UniRef50_Q0W6T4 [NiFe]-hydrogenase, large subunit (EchE-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T4_UNCMA Length = 486 Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 129/489 (26%), Positives = 214/489 (43%), Gaps = 50/489 (10%) Query: 108 MLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRK 167 +L+ L + + + T L P A+W ERE + G+ + HP+ R + +P W+ + Sbjct: 31 ILRTFLDRENPVLKSVTTLTPQADWSEREMIEFLGVRAEEHPDPRHLWLPLNWEQMHTDE 90 Query: 168 DYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAF 227 P + KP+ + GP HP+ + Sbjct: 91 AAPEK-----------------------KPQSIQASDHITTMPVSTIPYGPYHPAFIESN 127 Query: 228 RIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAV 287 + ++ E + +G++HR K+ ER+ ++ I +R+ L + + + LAV Sbjct: 128 YFKMAVEDEVVKKADLKLGFNHRSIIKLMERRDYYKDIYLAERVCGLCNAHHALSFCLAV 187 Query: 288 EKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVE 347 E + +TVP R ++IR M+ E+ RI SHL+ I VG T + R+ I D +E Sbjct: 188 ENIGQVTVPKRADIIRTMICEMERIQSHLMAIGILGDLVGYKTMLMQFLRIREDIQDSLE 247 Query: 348 AITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGV 407 ++G R+ +GGV D+ ++ L + K + + L N +L GR + V Sbjct: 248 LVSGQRVTHGLITLGGVRRDITPAQSNFVKRKLASLKKGVQTLYDEMLSNNVLIGRLKNV 307 Query: 408 AAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKV 467 +EA+ G G R +G DVRK PY+ YEN D++I G D RV +K+ Sbjct: 308 GVLPPEEAVRLGAVGPTARGSGQRLDVRKNTPYAYYENLDWDIVTDNG-CDSLARVEVKM 366 Query: 468 EELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPAN 527 E S+ I+EQCL L+T PP+ +IT + +P Sbjct: 367 REALVSISIVEQCLEK-----------LSTVPPE---------IITKLEE------LPCA 400 Query: 528 ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSI 587 E+ E +G Y++ S+G+ R+R P+F + + GS V+D+ +GSI Sbjct: 401 EALGKTEPPRGELLYHVASNGTNTPEFVRIRVPTFMTAYIMLKLLHGSYVADVPAIMGSI 460 Query: 588 DFVMSDVDR 596 D S DR Sbjct: 461 DPCYSCTDR 469 >UniRef50_Q1PZL4 Similar to membrane-bound [NiFe]-hydrogenase-3, large subunit (Chain E) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZL4_9BACT Length = 531 Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 147/556 (26%), Positives = 240/556 (43%), Gaps = 65/556 (11%) Query: 46 VWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDER-LRTHREGLPAADFSVFYHLISIDRN 104 V K+E LL V ++K + +L + DER L H F ++Y + S+ R Sbjct: 34 VSTKKENLLNVCLYIKDIFN--AVLSSMICNDERTLDKH--------FKIYY-VFSLQRE 82 Query: 105 RD-IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW--K 161 +++ + ++E P+ T P A+WYERE D+FG+ GHP +++ + Sbjct: 83 DTFLIVTIPVSEQQPEFPSITPQIPAAHWYEREIKDMFGLIPVGHPRPETLVLHGNFPEN 142 Query: 162 GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHP 221 +PLRKD F++ LE + F+ E E + +GP H Sbjct: 143 TYPLRKD----------FDIQTRIPHLESKLPFFR---------VEGEGVFEIPVGPIHA 183 Query: 222 SA--HGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 G FR G+ I + + H+G EK+ E + + +RI + + Sbjct: 184 GVIEPGHFR--FSAVGDSIFYLDAKLFFTHKGTEKIFETMPYTKALFLAERICGVCAASH 241 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDR 339 Y A+EK+A I +P R IR ++ EL RI +H+ + + + F R Sbjct: 242 ATGYCQAIEKVAEIEIPPRARFIRTIVMELERIYNHIGDVGNICAGTAFLLGIAHGFRIR 301 Query: 340 QKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTI 399 + + L E ITG R IGGV D+ ++ + L+ + K K +++ Sbjct: 302 EYLQQLNETITGNRYLRGMLAIGGVRFDINDDLEKHILSLLNHVKKDFKDLTKMMFKSSS 361 Query: 400 LKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDC 459 L R + + A G G RA+GI D R PY+ YE DF+IPV D Sbjct: 362 LLDRLETTGRLSEEIARGLGVVGVAARASGIVQDTRVNHPYAAYEEVDFDIPVFHYEGDV 421 Query: 460 YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVS 519 R+ ++V+E+ QS+ I+EQC M GP K P+ PP ++ L ++E+ Sbjct: 422 LARIRVRVDEVYQSIYIIEQCFEKMRPGPLKT--PIKELPPYKQALSYVES--------- 470 Query: 520 WGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSD 579 +G N Y++ + +R +VR+PSF + IP A+ G++V D Sbjct: 471 ----------------PRGENIYWIMTAPGNKLFRYKVRSPSFCNWPAIPFAVPGNIVPD 514 Query: 580 LIVYLGSIDFVMSDVD 595 + S + S D Sbjct: 515 FPLINKSFELCYSCTD 530 >UniRef50_UPI000186E11F NADH-ubiquinone oxidoreductase 49 kDa subunit, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E11F Length = 369 Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 90/210 (42%), Positives = 125/210 (59%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + LN GP HP+AHG R++L+L GE + C P IG HRG EK+ E +++ +PY DR+ Sbjct: 87 VVLNFGPQHPAAHGVLRLILELRGERVAKCDPHIGLLHRGTEKLIEYKTYTQALPYFDRL 146 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ NE Y LAVEKL I VP R IR M +EL RI +HL+ I T I DVGA+TP Sbjct: 147 DYVSMMCNEQCYSLAVEKLLNIEVPLRAKYIRTMFAELTRILNHLMGIGTHILDVGALTP 206 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 F+ F +R+K+ + E ++G RMH A+ R GGV+ DLP G + +FL L + Sbjct: 207 FFWFFEEREKLMEFYERVSGARMHAAYIRPGGVSQDLPLGLMDDIHQFLTKFGSILDDVD 266 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTT 421 N I R+Q + A++AL +G T Sbjct: 267 DVLTNNRIWVDRTQNIGVISAEDALNYGYT 296 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 48/79 (60%) Query: 518 VSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLV 577 +++G +P ++ IEA KG YL SDGS+ YR +++ P FAHL + +G + Sbjct: 291 LNYGYTVPPGATYTAIEAPKGEFGVYLVSDGSSKPYRCKIKAPGFAHLAALDKIGKGLFL 350 Query: 578 SDLIVYLGSIDFVMSDVDR 596 +D++ +G++D V +VDR Sbjct: 351 ADIVAIIGTLDIVFGEVDR 369 >UniRef50_B5Y915 EchE n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y915_COPPD Length = 360 Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 114/381 (29%), Positives = 188/381 (49%), Gaps = 27/381 (7%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 LGP HP+ I LQL+GE +VD IG+ HR EK ++++ + +R + Sbjct: 7 LGPYHPAFEEGEYIELQLEGEMVVDAEIKIGFIHRAIEKSATKRTFIRDLGLVERTCGIC 66 Query: 276 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 + Y LAVEK AG+ VP+R IRV+ +EL RI+SHL+Y+ +G T F Sbjct: 67 SFHHSWAYCLAVEKAAGLEVPERAEYIRVLTAELERIHSHLMYLGAMAHKMGFDTLFMFT 126 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 ++ R+ + D++E ++G R++ A +GGV D+ ++ L+ + + Sbjct: 127 WSGREAVMDMLELLSGNRVNYAINTLGGVRRDVDESISSQIKAALETLEDLGLKLKDTWS 186 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGG 455 ++ + R++ V KEA G G R +GI D+RK PY+ Y DF++ V Sbjct: 187 KDASILARTKNVGIVSRKEAHLLGVVGPTARGSGIREDLRKTAPYAVYPLLDFDLVVLDD 246 Query: 456 VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHF 515 D ++R ++V E+ +S++I+ Q L+ MP G K P+ P Sbjct: 247 -GDVWSRTFVRVLEVLESIKIIRQVLDKMPAGQIKNPKPVLKIEP--------------- 290 Query: 516 LQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGS 575 N+ +EA +G +Y+L +DG+ R ++RTP+ +L +RGS Sbjct: 291 -----------NDVIGRVEAPRGELAYHLITDGTDKPGRLKIRTPTLINLPASEHMMRGS 339 Query: 576 LVSDLIVYLGSIDFVMSDVDR 596 ++D V +G ID MS +DR Sbjct: 340 NLADAPVIVGHIDPCMSCMDR 360 >UniRef50_A3DNE9 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=2 Tax=Desulfurococcaceae RepID=A3DNE9_STAMF Length = 548 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 134/507 (26%), Positives = 240/507 (47%), Gaps = 61/507 (12%) Query: 96 YHLISIDR-NRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRI 154 Y++ +D + +I++K + ++ +P+ + P A+WYE E WDL GI F+ + R Sbjct: 73 YYIFGLDAAHLNIIVKTHTSADEPVLPSIIDIVPAADWYELEAWDLLGIKFENR-KVHRF 131 Query: 155 MMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFM 212 ++P W +PLRKD E+ T++P+ + R + Sbjct: 132 VLPDEWPEGIYPLRKD-----VEY-----------------TYRPKPRKVPR--QPPTGQ 167 Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYH-HRGAEKMGERQSW-HSYIPY-TD 269 + +GP HP+ H L ++GE++VD V G+H HRG EK+ E + + IP+ + Sbjct: 168 RIPIGPYHPALHEPEYFELYVEGEKVVD-VEYNGFHVHRGIEKLAEAPRFNYQKIPFLAE 226 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 RI + G V+ + Y ++VE+ A I VP+R IR ++ E+ R++SHLL+I +G Sbjct: 227 RICGICGFVHSVSYTMSVERAAKIDVPERAEYIRSIILEIERLHSHLLWIGVVCHLLGYD 286 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 + R+K+ L E +TG R +GGV D+ ++ ++++ Sbjct: 287 AGFMHTWRIREKVMVLAELLTGSRKTYGINLVGGVRKDINMDKIEAVKNTIEYIRSEFKH 346 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 + + R+ G +A + G R +G+D DVR+ PY+ Y + F+ Sbjct: 347 LSDLITSISQIVKRASGTGILSRDDARKLSVVGPVARGSGLDRDVRRDYPYAAYRDVYFK 406 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 +PV D R++++++E+ +S+ ILEQ ++ +P GP A+ Sbjct: 407 VPVYNE-GDNLARLLVRIDEVFESIYILEQLIDKLPGGPIMAEK---------------- 449 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 L+V G + N +EA +G ++T G YR RVR P++ ++ + Sbjct: 450 ------LEVPEGVIGIGN-----VEAPRG-EVIHVTITGHGRPYRWRVRAPTYQNIPALK 497 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +R + ++D + + SID S DR Sbjct: 498 IMLRDAPLADAPLTIASIDPCFSCTDR 524 >UniRef50_C7NUN7 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN7_HALUD Length = 419 Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 109/381 (28%), Positives = 185/381 (48%), Gaps = 22/381 (5%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 +GP HPS L +DGE I + Y+HRG E+ +S+ I +RI + Sbjct: 12 VGPQHPSLKEPANFTLTVDGEVITGADLKLSYNHRGIEQAVLSKSYLENIYLLERICGIC 71 Query: 276 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 + + + VE L + VP R N IR ++ EL RI+SH+L++ ++G T +A Sbjct: 72 SHAHTTSFAIGVEDLLDLDVPRRANYIRTLIGELERIHSHMLWLGVAGHEIGFDTLWQYA 131 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 + DR+ + DL+E ITG R+H + IGGV DL + E +D + +R+ Y + Sbjct: 132 WRDREIVLDLLEEITGNRIHYSINTIGGVRQDLTAEQRETVLEKMDELEERIDFYLETVP 191 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGG 455 ++ R + V A+ A E+ G RA+G+ DVR+ PY+ Y+ DF++ + Sbjct: 192 NEETVRMRCENVGTVSAELAREYCAAGPVGRASGLPVDVRRDAPYAAYDEMDFDV-ITDT 250 Query: 456 VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHF 515 D R +++ E+ +S+ I+ Q ++P+G KA +P P + L I Sbjct: 251 AGDLLARTTVRIREIAESISIIRQAAADIPDGDLKA-----SPKPVQALLAQI------- 298 Query: 516 LQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGS 575 P ++ EA +G +Y+ +DG+ R +R P+ A+ + A+RGS Sbjct: 299 ---------PEDDVVSRYEAPRGELIHYIRADGTDTPERVHIRVPTLANWPTVVEALRGS 349 Query: 576 LVSDLIVYLGSIDFVMSDVDR 596 ++D + + ID +S R Sbjct: 350 YIADTPIVVAGIDPCISCTSR 370 >UniRef50_Q0W2B9 Hydrogenase, large subunit-like protein (HycE-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B9_UNCMA Length = 524 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 144/579 (24%), Positives = 246/579 (42%), Gaps = 65/579 (11%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 + E+ FG + + + V V ++ L V F+ K + L LH D R Sbjct: 6 ITNEITAAFGEEMASARDVGNNV-FVRAGKDALPYVASFVAK--RYGASLATLHVADTRQ 62 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 T ++++ + N + ++ + E+ + T + +ANW+ERE D+ Sbjct: 63 MT-------GGYTMYAVMPVASENLIVSIEAEVPESPGTFQSLTPMIYSANWFEREIADM 115 Query: 141 FGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 FG+T GHP+LR +++ TW HPLRKD P R + T+ P Sbjct: 116 FGLTPVGHPDLRPLVLYDTWPEDYHPLRKDAPGRPPKVD----------------TYYPY 159 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSA--HGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 E E + +GP H G FR + GE ++ +GY H+G EK+ Sbjct: 160 HR-----VEGEGVFEIPVGPVHAGVIEPGHFR--FSVAGEPVLMLEIRMGYVHKGIEKIS 212 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 E ++ + ++R G + Y AVE+LAGI VPDR IR + E+ RI +HL Sbjct: 213 ESMTYDKGVFLSERTSGDNGMAHSTAYCQAVEQLAGIEVPDRARYIRTVFLEMERIYNHL 272 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 + D A+ R+++ L E ITG R+ + +IGGV DL R + Sbjct: 273 GDVGGISLDTAYNVGAQHAYILRERMLQLNECITGSRLLRSVNKIGGVRQDLTREDIEKI 332 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 R + + + T + R++ + A+ G G RA+G+ DVR+ Sbjct: 333 RTAIIKAKLDFKDFVDLVNRQTSILDRTETTGKLPLEAAVSLNIVGPGARASGVSRDVRR 392 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 PY+ Y + +F + + D R+ +K+ E+ +S+ I+EQ L+ +P G +A Sbjct: 393 DHPYAAYSDLNFAVHIRKE-GDVNARMQVKIGEIYESMSIIEQALDRLPAGKIRA----- 446 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 + G + ++EA +G +++ S + +R + Sbjct: 447 ----------------------ATGNIPQGRVGISLVEAPRGELLHWILSGENDRPFRHK 484 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +R PSF + + A G++V D + S + S D Sbjct: 485 IRDPSFCNWLAMEIATPGNIVPDFPLVNKSFNLSYSGND 523 >UniRef50_P21301 NADH-ubiquinone oxidoreductase 49 kDa subunit homolog n=3 Tax=Trypanosomatidae RepID=NDUS2_TRYBB Length = 386 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 112/384 (29%), Positives = 179/384 (46%), Gaps = 13/384 (3%) Query: 215 NLGPNHPSAHGAFRIVLQLDGEEIV--DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 GP HP+AHG +L GE IV DC+ IGY HRG EK+ E +S +PY DR++ Sbjct: 14 TFGPQHPAAHGVLCCLLYFCGEFIVYIDCI--IGYLHRGTEKLCEYKSVEQCLPYFDRLD 71 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y+ C NE L E + + R +R+++ E R + LL IS + D+G ++P+ Sbjct: 72 YVSVCCNEHLLSLCFEYMLRCCLSLRCAFMRLLIVEFTRSFNGLLCISCMVLDLGCLSPL 131 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 ++F +R K+ + G RMH A+ + G+ D G+ L + + Y+ Sbjct: 132 LWSFEERDKLMTFFDLCCGCRMHLAFMVLLGILDDFVFGFVDFLLLLIISCLFVMDCYDL 191 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 + N + R +G++ + + + +G R+ G+ +D R Y Y F ++ Sbjct: 192 LFVGNRLFYLRLRGLSFFDLYDLVFNSLSGVLSRSLGMVWDCRLFSCYELYFMFCYDYCF 251 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 + D + R+ L++ ++R SL I +QC L + T IET+I Sbjct: 252 -CFIGDAFDRLFLRLFDMRMSLLICKQCFFVGFFV--FGFVCLFDYLYCDIT---IETII 305 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 F + W +P SF +E KG L S R R+R F H+ + + Sbjct: 306 MLFYSL-WCCCLPGI-SFACVEHPKGEYCLLLCFCVGLCS-RLRLRCADFLHICLLDVCL 362 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 RG L+ DL+ LG+ID V VDR Sbjct: 363 RGFLLHDLVAVLGNIDVVFGSVDR 386 >UniRef50_Q5DUX5 NADH-ubiquinone oxidoreductase 49 kDa subunit n=3 Tax=Nyctotherus ovalis RepID=NDUS2_NYCOV Length = 412 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 117/393 (29%), Positives = 197/393 (50%), Gaps = 13/393 (3%) Query: 211 FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDR 270 + LN GP HP++HG R+V+ + GE + P IG+ HRG E++ E S+ + + DR Sbjct: 26 ILILNFGPQHPASHGVLRLVIVIIGEVVTKLDPHIGFLHRGTERLVEEHSYMNAAVFMDR 85 Query: 271 IEYLGGCVNEMPYVLAVEK-LAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 ++Y Y LAVE+ LA + R ++R + EL RI +HLL I+T D+G M Sbjct: 86 LDYTTVLTQTHAYCLAVEQALAKSRLCIRTQLLRTIFDELSRILNHLLSIATHALDIGTM 145 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPA-WFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 +F+AF DR++I +L E I+G RMH A ++ + H L + LL + L + Sbjct: 146 AMLFWAFEDRERIMELYEYISGARMHTALYYPNQTLDHILT---NELLAKILIFSRNSEK 202 Query: 389 SYEK---AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 +Y + A N + + R G+ + + +G R+TG+ D+R Y Sbjct: 203 TYTEIYIALYNNRVWRLRLCGIGVVSTEISTSTTISGPVARSTGLQLDMRSGENYQYGYY 262 Query: 446 FDFEIPVGGGVS-DCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 + + G+S D + R ++++ EL +S R++ L + + + + + Sbjct: 263 ASLTLRIFLGISGDSFDRFIIRLRELFESTRLIYNSLIELSAYINISVYNMCSYSNNPHL 322 Query: 505 LQHIETLITHFLQVSWGP-VMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFA 563 IE+LI F + S G ++ + +E+ KGI L ++ + YR +R+P++ Sbjct: 323 --KIESLIELF-RYSLGEYLLNISLVSGFVESGKGIFGIMLAANNTNRPYRLYIRSPAYM 379 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 HLQ +P G ++DL LGSID V +VDR Sbjct: 380 HLQLLPKLGAGHHIADLATLLGSIDVVFGEVDR 412 >UniRef50_B1YB08 NADH dehydrogenase (Quinone) n=5 Tax=Thermoproteaceae RepID=B1YB08_THENV Length = 407 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 117/392 (29%), Positives = 186/392 (47%), Gaps = 14/392 (3%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 E + + +GP HP + G R+ + LDG+ I + VPD G+ HRG EK+ E + + + IP Sbjct: 27 GERGLVVVVGPQHPGS-GHMRLFVVLDGDIIKEVVPDPGFVHRGVEKLAENRPYWTLIPL 85 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 ++ + +P LA+EK G+ P R +R ++EL RI +HL ++ +G Sbjct: 86 VEKASIMDSMNITLPITLALEKALGLEPPPRAKYLRTAMAELSRIRTHLYDLALLGIFLG 145 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T + F ++ ITG R A+ GGV D+ R + + L ++L Sbjct: 146 HSTAFMWGFALMDLYAEVFAKITGARTTVAYPVPGGVRRDVKREHIEAVEKLLRKTEEKL 205 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 ++ L N + K R +GV AK A E G G RA GID DVRKA PY Y D Sbjct: 206 RDFKTVFLDNPVTKARLEGVGVVDAKRAAELGVVGPFARAAGIDHDVRKAAPYDAYPELD 265 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT--L 505 FE+ V D RV+++ E+ S+ I+ Q L N+PEG D L P+ R + Sbjct: 266 FEV-VTEKAGDAMARVLVRWREMYVSMDIVRQALKNLPEGDV-IDQALLFKNPEYRREGM 323 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSY-YLTSDGSTMSYRTRVRTPSFAH 564 + + T+ + P + + +Y +L + G+ YR R TPS+ + Sbjct: 324 GGVLGVYTY--------MYPEPGEYAAVAEAARGATYIHLWTTGTQRVYRMRYVTPSWRN 375 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 L+ + A+RG ++D+ S + + DR Sbjct: 376 LKAMAEAMRGERLADMPAVYMSFGYFPPEADR 407 >UniRef50_B3VS74 NADH-ubiquinone oxidoreductase chain 49kDa n=4 Tax=Bacteria RepID=B3VS74_DESVM Length = 358 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 106/384 (27%), Positives = 183/384 (47%), Gaps = 30/384 (7%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 + GP HP + L ++ E IV+ +P +GY HRG E + + ++ + +R+ Sbjct: 5 IIPFGPQHPVLPEPLHLKLVVEDETIVEAIPALGYVHRGLETLASIRDYNQMVYIVERVC 64 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 + C++ M Y +E + + VP R +RV+ SEL RI+SHLL++ F G + Sbjct: 65 GICSCIHAMCYCQGLETMMNVEVPSRAKYLRVIWSELHRIHSHLLWLGLFADGFGFESLF 124 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 + R+++ D+ EA G R+ + +GGV DL + R + + LD + K L K Sbjct: 125 MQFWKIRERVMDINEATAGNRVVISVNVVGGVRRDLDKTQQRWILDELDKLEKELRQLMK 184 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 L + +K R+ GV A++A++ G G LR +G+ D R+ Y+ ++ DFE PV Sbjct: 185 TMLDDYTVKKRTVGVGVLTAEQAIQLGAVGPTLRGSGVAQDARQL-GYAAFDELDFE-PV 242 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 D + R ++ E QS+ I+ Q ++ +P+ A P Sbjct: 243 TSPEGDSWARSKVRFMETLQSMDIVRQAISRLPDSELAAKVPGK---------------- 286 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 P E +E +G YYL +GS R R+RTP+FA++ + A + Sbjct: 287 ------------PTGEVVCRVEQPRGELLYYLKGNGSKNMERVRIRTPTFANIPPLLAML 334 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 G+ ++D+ + +ID +S +R Sbjct: 335 PGAQLADVPIAALTIDPCISCTER 358 >UniRef50_C5CEV3 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV3_KOSOT Length = 402 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 111/387 (28%), Positives = 190/387 (49%), Gaps = 35/387 (9%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 L +GP HP A ++LDGE +VD + G+ HRG EK+ E ++ I +RI Sbjct: 7 LPVGPFHPLLEEAEYFKIKLDGERVVDIEMETGWMHRGIEKISEESTFDQSIFVVERI-- 64 Query: 274 LGGCVNEMPYVL--AVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 G C P+ A E + I VP + IR ++ EL R++SHLL++ +G T Sbjct: 65 CGICSASHPFACINAFEDIGEIEVPLKARYIRSLIGELERVHSHLLWLGLAGHFIGYDTL 124 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +A+ R+ + +++E ITG R H F+IGGV D + ++ E LD++ K+L Sbjct: 125 WMWAWKYREPVLEVIEMITGNRNHYGTFKIGGVRRDYDVSLNSVVHEKLDFLEKKLTMVA 184 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 KA + +++ R GV +EA+ + G RA+G+ DVRK PY+ Y+ DF + Sbjct: 185 KAVANDPVVRSRLCGVGVLTKEEAISYCAVGPTARASGVAIDVRKDEPYAAYDLLDFGVV 244 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM--PEGPFKADHPLTTPPPKERTLQHIE 509 V D + + ++++ E+ +S++++ Q + + +GP D KE Sbjct: 245 VREE-GDIFAKTVVRILEVFESIKMIRQIIEKLRKVKGPIYND-------VKE------- 289 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 +PA E EA +G +Y+ +DGS R ++R PS+ ++ Sbjct: 290 --------------IPAGEGIGRHEAPRGEVFHYIRTDGSNRPVRHKIRAPSYVNIPTYK 335 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 A+ G ++D+++ L S+D +R Sbjct: 336 ASCIGENLADVLITLASVDPCYCCTER 362 >UniRef50_C6A3Z3 Membrane-bound hydrogenase MBH 2, subunit Mbh2L (NiFe hydrogenase catalytic subunit) n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A3Z3_THESM Length = 412 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 113/392 (28%), Positives = 194/392 (49%), Gaps = 30/392 (7%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 ++ +GP HP+ R+ +++GE+IV G+ HRG E MG +++ + ++RI Sbjct: 7 YVPIGPIHPALKEPIRVEAEVEGEKIVKVDVKRGFAHRGIEYMGMKRNAIQTLYLSERI- 65 Query: 273 YLGGCVNEMPY--VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 G C PY V+ EK GI P R IR +++EL RI+SH+L++ ++G + Sbjct: 66 -CGICSISHPYAFVIGSEKALGIEAPPRAQYIRTIIAELERIHSHILWLGVIAHEIGFDS 124 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 +F+ + R+K+ D++EAITG R++ + + IGGV DL R+L++ + + + Sbjct: 125 LLFWTWKGREKVLDILEAITGNRINYSMYMIGGVRRDLKESHIRVLKDMITYYWEFTEHM 184 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE- 449 ++ L + + K R++GVA AL+ G RA G+ D+R+ PY Y + D + Sbjct: 185 KEVFLSDPVYKARTRGVAQVSKDVALKLNLVGPTARAAGLRMDIRQDIPYDAYADIDVKA 244 Query: 450 -IP---VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 +P VG D Y M+++ E+ QSL I+E C++N+PEG A Sbjct: 245 VVPQDIVGEARGDAYDVTMVRIYEIEQSLDIIEYCIDNLPEGKILA-------------- 290 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT-RVRTPSFAH 564 I +++ + E EA +G +Y DG+ +V PS+ + Sbjct: 291 ------IPNYIALLNKIKKTEGEGIGAHEAPRGEVVHYFRYDGTRDGPAVWKVIAPSYNN 344 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G+ V+D+ V + ID M DR Sbjct: 345 INSWGYCLLGAEVADIPVVVAYIDPCMCCNDR 376 >UniRef50_B5IS38 Respiratory-chain NADH dehydrogenase, 49 Kd subunit domain protein n=1 Tax=Thermococcus barophilus MP RepID=B5IS38_9EURY Length = 409 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 112/391 (28%), Positives = 193/391 (49%), Gaps = 29/391 (7%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 ++ +GP HP+ R+ +++GE+IV G+ HRG E MG +++ + ++RI Sbjct: 7 YIPIGPIHPALKEPIRVEAEVEGEKIVRVDVKRGFAHRGIEYMGMKRNAIQTLYLSERI- 65 Query: 273 YLGGCVNEMPY--VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 G C PY V+ EK GI P R IR +++EL RI+SH+L++ ++G + Sbjct: 66 -CGICSISHPYAFVVTAEKALGIEAPPRAQYIRPIIAELERIHSHILWLGVIAHEMGFDS 124 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 +F+ + R+K+ DL+E +TG R++ + + IGGV DL + +++ + + K Sbjct: 125 LLFWTWKGREKVLDLLELLTGNRINYSVYMIGGVRRDLKESHIKAIKDAITYYWKFTEQM 184 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE- 449 ++ L + + K R++GVA + AL+ G RA GI D+R+ PY Y + D Sbjct: 185 KEIILSDPVYKARTRGVAQLSKEMALKLNVVGPVARAAGIRMDIRQDMPYDAYADIDVRA 244 Query: 450 -IP---VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 +P VG D Y M+++ E+ QSL I+E C++N+PEG A + Sbjct: 245 VVPQDIVGEAKGDAYDITMVRIYEIEQSLDIIEYCVDNLPEGKILA-------------I 291 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 + L+ + E+ EA +G +YL DG +V PS+ ++ Sbjct: 292 PNYPALLAKIRRTK-------GEAIGAHEAPRGEVVHYLKFDGRDGPSVWKVIAPSYNNI 344 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G+ V+D+ + + ID M DR Sbjct: 345 NSWAPLLLGAEVADIPIVVAYIDPCMCCNDR 375 >UniRef50_Q1WLV6 Mitochondrial NADH:ubiquinone oxidoreductase 49kD subunit 7 (Fragment) n=1 Tax=Chlamydomonas incerta RepID=Q1WLV6_CHLIN Length = 277 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 85/194 (43%), Positives = 123/194 (63%), Gaps = 6/194 (3%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 LN GP HP+AHG R+VL++ GE I+ P IG HRG EK+ E +++ +PY DR++Y Sbjct: 86 LNFGPQHPAAHGVLRLVLEMQGEIIMRADPHIGLLHRGTEKLLEYKTYLQGLPYFDRLDY 145 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + E YVLA+E+L ++VP R IRV+ SE+ R+ +HLL I+ DVGA+TP Sbjct: 146 VSMMCMEHSYVLAIEQLLNLSVPLRGQYIRVLFSEITRVLNHLLAITCHSMDVGALTPFL 205 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK---RLASY 390 +AF +R+K+++ E ++G RMH +FR+GGV+ DLP G LLR+ DW + RL Sbjct: 206 WAFEEREKLFEFYERVSGARMHAGYFRVGGVSQDLPIG---LLRDVYDWARQFGLRLDEM 262 Query: 391 EKAALQNTILKGRS 404 E+ N I K R+ Sbjct: 263 EELLTGNRIWKERT 276 >UniRef50_D1Z1Z0 Putative [NiFe]-hydrogenase large subunit n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Z0_METPS Length = 530 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 118/489 (24%), Positives = 205/489 (41%), Gaps = 42/489 (8%) Query: 108 MLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRK 167 +L+ L + V + T + A+W ERE + G+ GHPN + +P W L Sbjct: 56 ILRTYLDRENPVVQSITPITDQADWSERELIEFLGVKVQGHPNPTHLWLPLNWDDMYLNG 115 Query: 168 DYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAF 227 + + D E E + P + + GP HP+ + Sbjct: 116 ---------------RPEADHETERINAAPPATTPRDNIVTLPVTAIPYGPYHPAFIESN 160 Query: 228 RIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAV 287 + + ++ E + +G++HR K+ ER+ ++ I +RI + + + +V Sbjct: 161 FLKMSVEDEVVKKVDLKLGFNHRSVIKLMERRDYYKDIFLAERICGFCNSHHALSFARSV 220 Query: 288 EKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVE 347 E +A I +P + + R +L E+ RI SHLL + G T + + R+++ D +E Sbjct: 221 EDIASIDIPPKAKLARTLLCEMERIQSHLLAVGLIGDLTGFRTMLMHSLRVREEMQDSLE 280 Query: 348 AITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGV 407 ++G R+ IGG+ D+ + L M K + + AL N +L GR + V Sbjct: 281 VVSGQRVTHGLITIGGIRRDITPAQADFILNKLRIMKKSVPEFFDQALSNDVLVGRLENV 340 Query: 408 AAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKV 467 + +++ G G R +G+ DVRK PY YE+ D++I G D R+ +K+ Sbjct: 341 GVLSLENSVKLGAVGPTARGSGLRIDVRKNSPYEAYEDVDWDIVTENG-GDSLARMKVKM 399 Query: 468 EELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPAN 527 E+ S+ I EQC + P + T + +P Sbjct: 400 REVLMSMHIAEQCCEKIKTAP-----------------AGLATKVNE---------LPCG 433 Query: 528 ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSI 587 E+ E +G Y++ S+G+ R+R P+F + I+G V D+ +GSI Sbjct: 434 EAISKSEPPRGELLYHVASNGTNTPDFVRIRVPTFLTAHIMLRLIQGGWVGDVPAIIGSI 493 Query: 588 DFVMSDVDR 596 D S DR Sbjct: 494 DPCFSCTDR 502 >UniRef50_A0L9R4 Membrane bound protein complex subunit mbxL n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R4_MAGSM Length = 391 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 114/355 (32%), Positives = 164/355 (46%), Gaps = 25/355 (7%) Query: 211 FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDR 270 ++ L GP HP G + L L G+EIVD +GY HRG EK+ ER+++ P R Sbjct: 28 YLKLWHGPQHPGITGNMSVELTLCGDEIVDAKTHVGYLHRGFEKLMERRTFIQCFPIVCR 87 Query: 271 IEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 + NE Y AVE+LAGI P+R IR ++ E+ RINS+L+Y+ G Sbjct: 88 VCVPEPDFNEYCYAAAVEELAGIECPERARWIRTLILEMGRINSYLMYLGGQSGAFGMGV 147 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 + R + D E +TG R++ + GGV LP G+++ + E L + + Sbjct: 148 IGQWTTYIRDLMLDRFEELTGARIYHMFILPGGVRDGLPEGFEQRMEETLRELESTMKDV 207 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 N + K RS GV +G TG RA G+ DVR +PY Y +E Sbjct: 208 RDVLFHNAVFKKRSVGVGVIDPAWLEPYGVTGPNARAAGVAKDVRIDQPYLVYPELSYEA 267 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQHIE 509 VG SD YTR ++ +L QS+ ++ Q L MP EGP A P Sbjct: 268 IVGKD-SDIYTRADVRYRDLLQSVDLIRQILARMPHEGPVMAKLPNV------------- 313 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 + W +P E++ E ++G YY+ +DGS R VR PS+ H Sbjct: 314 --------LHWK--IPQGETYIRGECSRGEYGYYVVTDGSGYPRRINVRGPSYTH 358 >UniRef50_D1HPS0 Whole genome shotgun sequence of line PN40024, scaffold_116.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HPS0_VITVI Length = 441 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 125/205 (60%), Gaps = 1/205 (0%) Query: 286 AVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDL 345 A E+L I VP R + IRV++ EL RI SHLL++ F+ D+G TP F+ F +R+ +YDL Sbjct: 10 APEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGVQTPFFYIFRERELVYDL 69 Query: 346 VEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQ 405 EA TG RM +FRIGGV DLP GW +F D+ +A Y+K ++N I R + Sbjct: 70 FEATTGMRMMHNYFRIGGVVVDLPHGWIDKCLDFCDYFLTGVAEYQKLIMRNPIFLERVE 129 Query: 406 GVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVML 465 GV G +EA+ WG +G L+A+GI +D+ K Y Y+ FD+E+ D +R ++ Sbjct: 130 GVGIIGVEEAINWGLSGPMLQASGIQWDLLKVDHYECYDEFDWEVQ-WQKEGDSLSRYLV 188 Query: 466 KVEELRQSLRILEQCLNNMPEGPFK 490 ++ E+ ++I++Q L +P GP++ Sbjct: 189 RIGEMMAFIKIIQQALKGIPGGPYE 213 >UniRef50_Q8U0Z6 Mbh12 membrane bound hydrogenase alpha (NADH dehydrogenase) n=3 Tax=Pyrococcus RepID=Q8U0Z6_PYRFU Length = 427 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 116/395 (29%), Positives = 195/395 (49%), Gaps = 26/395 (6%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E ++ + GP HP + ++ LDGE IV+ +GY+ RG + +G R+++ + Sbjct: 5 EYWVKIPFGPIHPGLEEPEKFIITLDGERIVNVDVKLGYNLRGVQWIGMRRNYVQIMYLA 64 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +R+ + + YV AVE++AGI VP+R IRV++ EL RI+SHLL + D+G Sbjct: 65 ERMCGICSFSHNHTYVRAVEEMAGIEVPERAEYIRVIVGELERIHSHLLNLGVVGHDIGY 124 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T + + R+++ D++EA++G R++ + IGGV D+ RL+ + + + + L Sbjct: 125 DTVLHLTWLARERVMDVLEAVSGNRVNYSMVTIGGVRRDIGEKQKRLILDMIKYYREVLP 184 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 E L ++ ++ R + VA K A+E G G R +GI D R + Y + Sbjct: 185 QIEDVFLHDSTIEARLRDVAVVPKKLAIEMGAVGPTARGSGIKEDSRWSEQLGVYPDLGI 244 Query: 449 EIPVGGGVS------DCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE 502 + V+ D Y R+ +++ EL SL +LE L+ MPEG K PK+ Sbjct: 245 KPVTPEDVTGEKARGDVYDRMAVRIGELWMSLDLLEHALDQMPEGKIKTF-------PKD 297 Query: 503 RTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD-GSTMSYRTRVRTPS 561 L V+ ++ E EA +G +Y+ G R + R P+ Sbjct: 298 NIL------------VAKLKLLGDGEGIGRYEAPRGELVHYVRGQKGRDGPVRWKPREPT 345 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +L I A+ G+ ++DL+V + SID +S DR Sbjct: 346 FPNLFTIAKALEGNELADLVVAIASIDPCLSCTDR 380 >UniRef50_Q2FTW4 Membrane bound hydrogenase subunit mbhL n=3 Tax=Euryarchaeota RepID=Q2FTW4_METHJ Length = 409 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 110/391 (28%), Positives = 189/391 (48%), Gaps = 30/391 (7%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGE--EIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L +GP HP+ Q++GE E VD P G HRG E MG R++ + DRI Sbjct: 10 LPIGPIHPALKEPINFTFQMNGEVIEKVDFAP--GRAHRGIEWMGMRRNPVQILHLCDRI 67 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + G + + + AVE++A I VPDR +R +++E RI SH+L+ ++G T Sbjct: 68 CGICGVHHALVFAQAVEQIADIEVPDRAYYVRTIIAEFERIQSHILWAGVAAHELGFDTL 127 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + A+ R++ D++E ITG R++ +GG D+ L + L + L Sbjct: 128 FYLAWQIREESVDVIEYITGNRVNYGIMMLGGTRRDITADMFPRLEQALQYYEGLLEKMV 187 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 L + + R + + ALE T G RA+G+ DVR PY+ Y + DF+I Sbjct: 188 NLFLNDKTIAMRCKDTGILTKRRALELATVGPTSRASGLAMDVRIDSPYAAYGDLDFDIV 247 Query: 452 V-----GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 + G D Y R+++++ E++QS+ I+ QC+ MPEGP A+ + Sbjct: 248 LPDVYNSEGNGDVYDRIIVRIFEIKQSIDIIRQCMKQMPEGPVLAE-------------E 294 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT-RVRTPSFAHL 565 L+ + + S E+F +EA +G + +Y+ +G + +V+ ++++ Sbjct: 295 KYAKLLMNLKKAS-------GEAFARVEAPRGEDMHYVRMNGKQEAPEMWKVKASTYSNQ 347 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++G ++D+ + + SID MS DR Sbjct: 348 MAWVEILQGEQIADIPIIVASIDPCMSCTDR 378 >UniRef50_UPI000190D906 bifunctional NADH:ubiquinone oxidoreductase subunit C/D n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-0664 RepID=UPI000190D906 Length = 79 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 76/79 (96%), Positives = 78/79 (98%) Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 AL+NTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK RPYSGYENFDFE+PVG Sbjct: 1 ALRNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKWRPYSGYENFDFEVPVG 60 Query: 454 GGVSDCYTRVMLKVEELRQ 472 GGVSDCYTRVMLKVEELRQ Sbjct: 61 GGVSDCYTRVMLKVEELRQ 79 >UniRef50_P31895 Carbon monoxide-induced hydrogenase n=14 Tax=Bacteria RepID=COOH_RHORU Length = 361 Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 108/386 (27%), Positives = 184/386 (47%), Gaps = 37/386 (9%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 +GP H + +++DGE++V G+ HRG E + +++ + I T+R+ L Sbjct: 8 VGPLHVALEEPMYFRIEVDGEKVVSVDITAGHVHRGIEYLATKRNIYQNIVLTERVCSL- 66 Query: 276 GCVNEMP--YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 C N P Y +A+E + G+ VP R +RV+ E R+ SH+ ++ VG + Sbjct: 67 -CSNSHPQTYCMALESITGMVVPPRAQYLRVIADETKRVASHMFNVAILAHIVGFDSLFM 125 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPR-GWDRLLREFLDWMPKRLASYEK 392 R+ + D EA+ G RM A IGGV +DL + G D + + P Sbjct: 126 HVMEAREIMQDTKEAVFGNRMDIAAMAIGGVKYDLDKDGRDYFIGQLDKLEPTLRDEIIP 185 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 N + R++G+ A + +++G G R +G +DVRK PY+ Y+ DFE+ + Sbjct: 186 LYQTNPSIVDRTRGIGVLSAADCVDYGLMGPVARGSGHAYDVRKQAPYAVYDRLDFEMAL 245 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 G D ++R M++ +E S+ ++ QCL +MP+GP KA Sbjct: 246 GEH-GDVWSRAMVRWQEALTSIGLIRQCLRDMPDGPTKA--------------------- 283 Query: 513 THFLQVSWGPV--MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 GPV +PA E+ EA +G YYL ++G+ R + R P++ + + Sbjct: 284 --------GPVPPIPAGEAVAKTEAPRGELIYYLKTNGTDRPERLKWRVPTYMNWDALNV 335 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G+ +SD+ + + SID +S +R Sbjct: 336 MMAGARISDIPLIVNSIDPCISCTER 361 >UniRef50_C4PZT7 NADH-ubiquinone oxidoreductase fe-s protein 2 (Ndufs2), putative n=1 Tax=Schistosoma mansoni RepID=C4PZT7_SCHMA Length = 538 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 77/190 (40%), Positives = 114/190 (60%), Gaps = 1/190 (0%) Query: 397 NTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGV 456 N I R++ V A++AL+ G +G LR +GI +D+RK +PY YE+ DF++PVG Sbjct: 136 NPIWITRTKDVGIVSAEDALDLGFSGVMLRGSGIKWDLRKTQPYDAYEDMDFDVPVGVH- 194 Query: 457 SDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFL 516 DCY R ++++EE+RQSLRI+EQCLN MP+G K D PP + +E LI HF Sbjct: 195 GDCYDRFIVRMEEMRQSLRIMEQCLNKMPKGEIKVDDAKICPPKRAEMKSSMEALIHHFK 254 Query: 517 QVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSL 576 S G ++P ++ +EA KG YL SDG+ YR +++ P FAH+ I RG + Sbjct: 255 LFSEGYLVPPGSTYTAVEAPKGEFGVYLVSDGTNKPYRCKIKAPGFAHMAAIDKLCRGFM 314 Query: 577 VSDLIVYLGS 586 + D++ + S Sbjct: 315 LPDVVAVIVS 324 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 24/48 (50%), Positives = 35/48 (72%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 LN GP HP+AHG R++++LDGE+I+ P IG HRG EK+ E +++ Sbjct: 79 LNFGPQHPAAHGVLRLIMELDGEKIIRLDPHIGLLHRGTEKLIEYKTY 126 >UniRef50_B6YU98 Membrane bound hydrogenase, NiFe-hydrogenase large subunit 2 n=5 Tax=Euryarchaeota RepID=B6YU98_THEON Length = 426 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 111/395 (28%), Positives = 188/395 (47%), Gaps = 26/395 (6%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E ++ + GP HP + +L LDGE IV+ +GY+ RG + + R+++ + Sbjct: 6 EYWIKIPFGPIHPGLEEPEKFILTLDGERIVNVDVKLGYNLRGLQWIAYRRNYVQIMYLA 65 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +RI + + Y AVE+ AGI VP+R IR ++ EL R++SHLL + D+G Sbjct: 66 ERICGICSFSHNHTYTRAVEEAAGIEVPERAEYIRAIIGELERVHSHLLNLGVLGHDIGY 125 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T + + R+++ D++EAI+G R++ + IGGV D+ RL+ + + + + Sbjct: 126 DTVLHLTWLARERVMDVLEAISGNRVNYSMVTIGGVRRDIDEKGKRLILDMIKYYRSIMP 185 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 E+ L + ++ R + A + ALE G G RA+G+ D R + Y + Sbjct: 186 QIEEVFLHDPTIEARLRDCAVISKRVALEQGAVGPTARASGLKVDARWSERLGVYPDLGV 245 Query: 449 EIPVGGGVS------DCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE 502 + + V+ D + R +++ E+ QSL +LE L+ MPEG K PK+ Sbjct: 246 KPVMPQDVTGEKPHGDVFDRAAVRIGEIYQSLDMLEHALDQMPEGKIKTF-------PKD 298 Query: 503 RTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG-INSYYLTSDGSTMSYRTRVRTPS 561 L V+ +M E EA +G + Y GS R + R P+ Sbjct: 299 NIL------------VAKLKIMVDGEGIGRYEAPRGELVHYVRGKKGSDKPLRWKPREPT 346 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +L + + G V+D ++ + SID +S DR Sbjct: 347 FPNLFAVAKGVTGDQVADFVLAVASIDPCLSCTDR 381 >UniRef50_B8I2P5 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=2 Tax=Clostridium RepID=B8I2P5_CLOCE Length = 530 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 133/497 (26%), Positives = 219/497 (44%), Gaps = 58/497 (11%) Query: 92 FSVFYHLISIDRNRDIMLKVALAEND--LHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 +V+Y N I L L END V + P A+ YERE D++GI F+ P Sbjct: 68 LTVYYTFAVRSSNTLITLYSKL-ENDGSAKVDSIALEVPAASLYEREIHDMYGIVFEELP 126 Query: 150 NLRRIMMPQTW--KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTE 207 + R ++ + HPLR+++ ++ PF+ +++LE +T Sbjct: 127 DSRELVHHGNFPLDVHPLRRNF--KSNTHLPFQ----QRELEFSTIT------------- 167 Query: 208 NEDFMFLNLGPNHPS--AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 E + +GP H G FR + GE I++ + Y HRG EK+ E Q + + Sbjct: 168 GEGVFEVPVGPVHAGIIEPGHFR--FSVAGEPIINLEAKLYYVHRGLEKLCENQHYMKVL 225 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGIT-VPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 +++RI N + + A+EKL GIT +P+R RV+ +EL RI HL I Sbjct: 226 LFSERISGDETFTNSLAFCQAIEKLNGITYIPERAVYSRVLFAELERICGHLGDIQGLCV 285 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 D + P R+ I L E +TG R + GG+ D R ++++ E ++ + Sbjct: 286 DTAYIFPSGQFAMMRRWIQLLNEQLTGSRFLRNTNKPGGLRRDFVRSNEKIILECINKLD 345 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 K N + R + A++ G G RA+G+ DVRK PY+ Y Sbjct: 346 KEFKETVAIIKNNGMFIDRVEHTGILENSIAVDLNVVGPGGRASGVKTDVRKEFPYAAYS 405 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE-GPFKADHPLTTPPPKER 503 F +P D R+ +K+EE+ +S+ I++Q L MPE GP D Sbjct: 406 KLKFNVPEHSNC-DVNCRMNVKIEEVIESINIIKQVLEKMPEEGPVSVD----------- 453 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFA 563 G + P + +F M E+ +G N +++ + + +R +VRTPSF Sbjct: 454 ----------------IGELKPYSYAFGMTESPRGENLHFVMTGENNTIFRYKVRTPSFC 497 Query: 564 HLQQIPAAIRGSLVSDL 580 + + A+ + ++D Sbjct: 498 NWPALCHAVNTNTLTDF 514 >UniRef50_A3DM94 Membrane bound protein complex subunit mbxL n=2 Tax=Desulfurococcaceae RepID=A3DM94_STAMF Length = 375 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 112/390 (28%), Positives = 180/390 (46%), Gaps = 34/390 (8%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 LGP HP A G L LDGE ++D G+ HRG EKM E + W + + RI Sbjct: 11 LGPQHPGAPGNVGFKLLLDGERVLDIDLIPGFLHRGFEKMMEYRRWDMDLVMSARI---- 66 Query: 276 GCVN-----EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 CV E+ Y A+E++ GI P++ +RV+++E R+ SHLL++ F + A Sbjct: 67 -CVEDPDHIELTYTHAMEQIFGIEPPEKAKYVRVIVAEFSRLASHLLWMMYFAGPIAARY 125 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 +A R++I + ++G R++ + GGV D+P + + L + + Sbjct: 126 ATSWAIAAREEILKWFDYVSGHRIYHHYIFPGGVRWDIPSDFKEKTLKVLKVIKPLIDDI 185 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 + I + R++ + +A+ G TG LR +G+ FD+RK Y Y DFEI Sbjct: 186 RDGFFYHPIFEKRARDMGRLKPGDAIRLGATGPTLRGSGVKFDLRKVLKYDAYGEIDFEI 245 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQHIE 509 P G D Y R ++++ E+ S+ I+ Q + MP EGP++ P T P + +E Sbjct: 246 P-SGEYGDSYDRALVRLREMYISMEIIRQAVEKMPTEGPYRYRLPATI--PAGEGIGRVE 302 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 + FL +++ G Y YR + R P+ AHL + Sbjct: 303 SARGEFLA-------------HILQRPPGARRY----SKPLSPYRIKFRGPTMAHLTTVL 345 Query: 570 AAIRGS---LVSDLIVYLGSIDFVMSDVDR 596 I + ++DL V +GS D D+DR Sbjct: 346 KHIVHNEEITIADLPVLIGSFDPCPPDIDR 375 >UniRef50_P16431 Formate hydrogenlyase subunit 5 n=104 Tax=Bacteria RepID=HYCE_ECOLI Length = 569 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 145/563 (25%), Positives = 244/563 (43%), Gaps = 72/563 (12%) Query: 46 VWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDER-LRTHREGLPAADFSVFYHLISIDRN 104 V +K L EV +FL ++ + L G DER L H ++V+Y ++S+++ Sbjct: 35 VTVKVNYLPEVVEFLYYKQGGWLSV--LFGNDERKLNGH--------YAVYY-VLSMEKG 83 Query: 105 RD--IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG 162 I ++V + N P+ T P A W ERE D++G+ G P+ RR+++P W Sbjct: 84 TKCWITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPD 143 Query: 163 --HPLRKDY------PARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL 214 +PLRKD PA T+ +E E G K+ + Sbjct: 144 ELYPLRKDSMDYRQRPAPTTDAETYEFIN---------------ELGDKKNN------VV 182 Query: 215 NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE-RQSWHSYIPYTDRIEY 273 +GP H ++ L +DGE I+D + Y HRG EK+ E R ++ +DR+ Sbjct: 183 PIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCG 242 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + G + Y +VE GI VP+R +IR +L E+ R++SHLL + G + Sbjct: 243 ICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFM 302 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 F R+ + E +TG R IGG+ DL + R+ M + + Sbjct: 303 QFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELVDV 362 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 L ++ R+ G+ + A ++ G +RA+G D R P+ GY E+ Sbjct: 363 LLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVHSE 422 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 G D +R+ +++ E+ +L +++ L+N+P GP Sbjct: 423 QG-CDVISRLKVRINEVYTALNMIDYGLDNLPGGP------------------------- 456 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 L V +P + EA +G + ++ + + YR R R ++A+ + +R Sbjct: 457 --LMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLR 514 Query: 574 GSLVSDLIVYLGSIDFVMSDVDR 596 G+ VSD + +GS+D S DR Sbjct: 515 GNTVSDAPLIIGSLDPCYSCTDR 537 >UniRef50_D2LAG1 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2LAG1_9DELT Length = 409 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 117/414 (28%), Positives = 192/414 (46%), Gaps = 39/414 (9%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 L GP HP + L ++ E +++ +P +GY HRG E++ E + ++ I +R+ Sbjct: 5 ILPFGPQHPVLPEPLHLKLTIENETVIEALPTLGYVHRGLERLCEIRDFNQMIQIVERVC 64 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 + C++ + Y VE++ G+ VP R +R + EL R++SHLL++ F G + Sbjct: 65 GICSCLHALCYCEGVEQIMGVEVPRRAKYLRTIWGELHRMHSHLLWLGLFADAFGFESLF 124 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 + R++I D++EA G R+ + IGGV DL E W+ ++LA EK Sbjct: 125 MQFWRVRERIMDIMEATCGNRVVVSVNVIGGVRRDLS-------PEQCLWIEQQLALSEK 177 Query: 393 --AALQNTIL-----KGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 LQ TIL K R+ G+ ++A + G G LR +G D R+ Y+ ++ Sbjct: 178 EIKQLQTTILNDYTVKKRTVGIGVLSKEKAYQLGAVGPMLRGSGWAQDARQT-GYAAFDE 236 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP--------EGPFKADHPLTT 497 FE PV D Y R ++ E QS+ I+ + MP EG + D P Sbjct: 237 LGFE-PVVEYGGDSYARCAVRFRETLQSIDIVRLAIARMPAGETSVNVEGAMEDDTPRPV 295 Query: 498 PPPKERTLQHIETLITHF---------LQVSWGPVM------PANESFQMIEATKGINSY 542 + R + H L + G V P E+ +E +G Y Sbjct: 296 VAGERRDIMQAYNRDKHHKITAAPPPNLDLPTGLVAAKVKGKPDGEAVTRVEQPRGELMY 355 Query: 543 YLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Y+ +GS R R+RTP+FA++ + A + G ++D+ V + SID +S +R Sbjct: 356 YIKGNGSKNMERVRIRTPTFANIPPLLAILPGCELADVPVIVLSIDPCISCTER 409 >UniRef50_C8W240 Hydrogenase, large subunit-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W240_DESAS Length = 525 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 140/547 (25%), Positives = 232/547 (42%), Gaps = 74/547 (13%) Query: 60 LKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVAL-AENDL 118 +K+L L + G+DER FSV+ + K+ L AEN Sbjct: 43 VKRLKAEGAYLLTMTGVDERDYN-------GHFSVYSVFGLPGDTTLVETKIVLNAEN-- 93 Query: 119 HVPTFTKL---FPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGH--PLRKDYPARA 173 PTFT + P+A+W ERE D+ GI GHP+LRR+ + W P+RKD+ A Sbjct: 94 --PTFTSISPVMPSAHWLEREIKDMLGIVPYGHPDLRRVAVHPDWPQDVFPMRKDFIAGR 151 Query: 174 TEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS--AHGAFRIVL 231 ++ + + +++ + E E + +GP H G FR Sbjct: 152 ------QVPRVQGEMQFCKV-------------EGEGLYQVPVGPVHAGIIEPGHFRFFT 192 Query: 232 QLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLA 291 GE++++ + Y HRG EK E + + + +R+ + + + Y A+E LA Sbjct: 193 F--GEDVINLQAQLFYTHRGIEKTAEGKHFLDAVLVAERVCGVCSASHAVSYAQAIESLA 250 Query: 292 GITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITG 351 GI P R IR +L E+ R+ +H+ I +G + ++++ + + G Sbjct: 251 GINAPLRARYIRTVLLEMERLYNHVGDIGNMCAGIGFSFGISRGAELKERLMRMNMKLAG 310 Query: 352 FRMHPAWFRIGGVAHDLP--RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAA 409 R GGV DL G R LD + + L L + L R Q Sbjct: 311 HRYLRGTVVPGGVKIDLKDTEGIGRA----LDTVKRELKELTDTMLSSQSLLDRMQTTGV 366 Query: 410 YGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEE 469 A + G TG RA+G++ D+R+ PY+ Y F++P+ D Y R++ ++EE Sbjct: 367 LPTDAARDLGATGPAARASGVNRDLRREFPYAAYRRVSFQVPIQHE-GDVYCRLIQRIEE 425 Query: 470 LRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANES 529 QS I+ Q NN+P G +A P+T +LQ P + + Sbjct: 426 SEQSFDIIRQVFNNLPAGELQA--PIT------------------YLQ-------PYHTA 458 Query: 530 FQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDF 589 E+ +G N +++ S YR VR+ S + +P + G++V D + S + Sbjct: 459 VGYTESARGANVHWVMSGPDNTVYRYMVRSASHCNWPVVPLCLPGNIVPDFPLINKSFEL 518 Query: 590 VMSDVDR 596 + +DR Sbjct: 519 CYACLDR 525 >UniRef50_Q24ST8 Formate hydrogenlyase subunit 5 n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST8_DESHY Length = 554 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 153/608 (25%), Positives = 257/608 (42%), Gaps = 69/608 (11%) Query: 4 LTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGD--FLK 61 + + E + R++ ++ V+ + P+ F+ +VW+K L EV + +LK Sbjct: 1 MGSMESSASLRNYFEERVLKQ------PEGFSFGLWTKNEGLVWLKPACLPEVMEQLWLK 54 Query: 62 KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVP 121 +P +M G DER H V Y L+ + + L E P Sbjct: 55 VPSRPLLMTHV--GNDERSLGHG--------FVIYLLLHFPGDFTLTLGARGIEKSF--P 102 Query: 122 TFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPF 179 + T L P NW ERE DL G+ DGHP+ R +++ W G +PLRK P +P Sbjct: 103 SLTLLCPALNWPEREVRDLLGLHPDGHPDPRPLVLHPGWTGGFYPLRKPCPE-----TPA 157 Query: 180 ELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIV 239 + ++ ++F P+ E E + +GP H Q GE ++ Sbjct: 158 SIGGECPGEALKEVSFNPQPLSFTE-AEGEGTFEIPVGPVHAGIIEPGHFRFQTIGETVL 216 Query: 240 DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRV 299 + Y H+G EK+ E + + +R+ + + + Y AVEKL G+ VP + Sbjct: 217 HLDAQLFYTHKGIEKLLEGKDLEEGLKIVERVCGVCAVSHALAYCEAVEKLKGMEVPRWI 276 Query: 300 NVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWF 359 R +L+EL R+ +H+ I VG A +++++ L + G R Sbjct: 277 LGWRTVLAELERLYNHVGDIGNLCAGVGFALGNVNALQNKEQLQRLNHQLFGHRFLRGNI 336 Query: 360 RIGGVAHDLPRGWDR---------LLREFLDWMP--KRLASYEKAALQNTILKGRSQGVA 408 GGV +P+G +R L ++F +W+P + + + A+ +L +S Sbjct: 337 TPGGV-KKIPQGEERAYLQRRLAELEQDFEEWLPLIQEHDGFRQRAITTGVLSKQS---- 391 Query: 409 AYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVE 468 AL+ G TG RA+GI D R+ + YE E P D ++R+M++V Sbjct: 392 ------ALDLGVTGPAARASGISQDWRERHAHLLYEELKME-PQVEQEGDVWSRLMVRVR 444 Query: 469 ELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 528 E++QS +L + L EG F D T + L +WG Sbjct: 445 EVKQSFALLAELL----EGDFLQD----TVEQGDFDLNGSGAFSPQPYSFAWG------- 489 Query: 529 SFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSID 588 E+ +G + +L D YR R+R+ S+A+ +P A++G++V D + S + Sbjct: 490 ---CAESPRGTDVIWLMLDDEGKIYRCRIRSASYANWAAVPLAVQGNIVPDFPLINKSFE 546 Query: 589 FVMSDVDR 596 S DR Sbjct: 547 LCYSCCDR 554 >UniRef50_A3DKH4 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 Tax=Desulfurococcaceae RepID=A3DKH4_STAMF Length = 406 Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 106/381 (27%), Positives = 180/381 (47%), Gaps = 24/381 (6%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 +GP HP+ H + DGEEIV+ + GY+HRG EK+GE+ +++ I R+ + Sbjct: 17 VGPQHPALHEPVLLKAYADGEEIVNVEINTGYNHRGIEKLGEKNTFYRDIFIVARVCGIC 76 Query: 276 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 V+ YV A+E++ + +R +RV+ E R++SH+L + + +G + Sbjct: 77 NLVHANCYVRALEEILDMHPNERAKYLRVLAMEFERVHSHMLINAVMAEIIGFDSLFMNI 136 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 DR+ I E ITG R+ + IGGV D+ L + +D + RL Y+K + Sbjct: 137 MLDRENIMKAKEIITGNRVLSDYMMIGGVRRDIDSVKKDKLLKIIDKVLPRLHYYKKLFM 196 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGG 455 ++ + R V + + G RA+G+ DVR + Y Y + F + V Sbjct: 197 EDDTILKRLVDVGVIKRSDVTRYTFVGPPARASGVKIDVRVSEKYEVYGDIPFNM-VTRN 255 Query: 456 VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHF 515 D + R++++ +E +SL + + L ++P P P ER L Sbjct: 256 EGDSWARMIVRWDEAIESLNMAKYILEHLPND--------GNPVPDERRLPR-------- 299 Query: 516 LQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGS 575 P E+F +EA +G +YY+ SDG YR +++TPSF ++ G Sbjct: 300 -------RFPPGEAFTRVEAPRGELTYYVMSDGKPKPYRLKIKTPSFTNIINSGYLYVGH 352 Query: 576 LVSDLIVYLGSIDFVMSDVDR 596 ++DL V L S+D +S ++R Sbjct: 353 TIADLPVILVSLDPCISCMER 373 >UniRef50_C7N626 Ech hydrogenase subunit E n=25 Tax=cellular organisms RepID=C7N626_SLAHD Length = 362 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 106/382 (27%), Positives = 175/382 (45%), Gaps = 31/382 (8%) Query: 217 GPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGG 276 GP HP + L + E++++ +P IG+ HRG EK+ E++ H +I +RI + Sbjct: 10 GPQHPVLPEPLHLDLVVQDEKVIEVIPQIGFIHRGLEKLVEKKDIHQFIYVAERICGICS 69 Query: 277 CVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAF 336 + + Y VEKL G+ VP R +RV+L EL RI+SHLL++ G ++ Sbjct: 70 FGHSLGYAETVEKLMGVEVPRRAEYLRVILHELSRIHSHLLWLGLAADAFGFEALFMHSW 129 Query: 337 TDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQ 396 R+++ D+ EA TG R+ + +IGGV D+ + + LD M A L Sbjct: 130 RIRERVLDIFEATTGGRVILSAVQIGGVIRDIDDEELKQISATLDGMRSEYAELMATFLN 189 Query: 397 NTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR--KARPYSGYENFDFEIPVGG 454 +T ++ R V +A + G RA+ + FD R Y ENF P+ Sbjct: 190 DTSVRSRLVNVGRLTQTQAEDLCMVGPFARASNVKFDCRMLGNGAYGELENFQ---PILD 246 Query: 455 GVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITH 514 DCY RV ++ +E+ QS+ I+++ + +P LT P Sbjct: 247 DEGDCYARVRVRCKEVIQSIDIIQELIAKIPHDGIGERSKLTPP---------------- 290 Query: 515 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRG 574 ++ ++E +G YY +GS R R+RTP+ +L + AA G Sbjct: 291 ----------DGAQAANVLEQPRGECYYYARGNGSKNLERMRMRTPTSQNLAGLVAACEG 340 Query: 575 SLVSDLIVYLGSIDFVMSDVDR 596 + ++D+ L +ID +S +R Sbjct: 341 AELADVPNILLTIDPCISCTER 362 >UniRef50_A6DAC0 Carbon monoxide-induced hydrogenase, large subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC0_9PROT Length = 358 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 109/393 (27%), Positives = 187/393 (47%), Gaps = 48/393 (12%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDI-GYHHRGAEKMGERQSWHSYIPYTDRIE 272 +N+GP S L +D EIV V + G+ HRG E + ++++ + T+R+ Sbjct: 4 INIGPFLASLEEPIYFKLDVDDNEIVRDVEIVNGFVHRGLEALTMQKNFFQNLILTERLC 63 Query: 273 YLGGCVNEMP--YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 L C N P Y LA+EK+A I V R + +RV+ E+ RI S++ +S V Sbjct: 64 AL--CSNNHPFSYCLALEKIAEIEVSKRADYLRVIADEVKRIASNMFNLSMLAHLVHDYE 121 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL-------DWM 383 + R+ + D+ E I G RM + IGGV ++L + + L D + Sbjct: 122 LMRDTMDTREIMQDVKETIWGNRMDLSAVTIGGVKYNLDKQKSEFILNSLEKIEPLVDKL 181 Query: 384 PKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 +R + EK +++G+ ++ALE+G +G R +GI+ DVR PY+ Y Sbjct: 182 FERFCNSEKIK--------KTKGIGVLTKQQALEFGVSGPVARGSGINNDVRVKAPYAAY 233 Query: 444 ENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKER 503 + + + + D Y+R+ ++ +++ +++IL+ +NN+P GP Sbjct: 234 DELEVRVDLESD-GDVYSRMKVRWYDIKNAIKILKNAINNLPSGPI-------------- 278 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFA 563 H+E P +PA E+ EA +G YY+ +DG R R R P++ Sbjct: 279 ---HLEK----------RPHIPAGEATVRTEAPRGELIYYVKTDGGQKPKRMRWRVPTYM 325 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + Q + I+G+ SD+++ L SID +S DR Sbjct: 326 NFQALEEMIKGNRASDVVLILNSIDPCVSCTDR 358 >UniRef50_P77329 Hydrogenase-4 component G n=130 Tax=Bacteria RepID=HYFG_ECOLI Length = 555 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 140/493 (28%), Positives = 216/493 (43%), Gaps = 63/493 (12%) Query: 107 IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW--KGHP 164 I++K + + P+ T P A W ERE D++G+ G P+ RR+++P W HP Sbjct: 91 IVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHP 150 Query: 165 LRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAH 224 LRKD A P T + E F E N D + +GP H ++ Sbjct: 151 LRKD--AMDYRLRPEPTTDS------ETYPFINEG--------NSDARVIPVGPLHITSD 194 Query: 225 GAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE-RQSWHSYIPYTDRIEYLGGCVNEMPY 283 L +DGE+IVD + Y HRG EK+ E R ++ +DR+ + G + + Y Sbjct: 195 EPGHFRLFVDGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAY 254 Query: 284 VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIY 343 +VE GI VP R + IR +L E+ R++SHLL + VG T F R+K Sbjct: 255 TNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSM 314 Query: 344 DLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGR 403 + E + G R IGGV D+ L+E +RL + + L + Sbjct: 315 TMAELLIGSRKTYGLNLIGGVRRDI-------LKE------QRLQTLK---LVREMRADV 358 Query: 404 SQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRV 463 S+ V A +E T G G+ I D+R PY+ Y N + G D ++RV Sbjct: 359 SELVEMLLATPNMEQRTQGIGILDRQIARDLRFDHPYADYGNIPKTLFTFTG-GDVFSRV 417 Query: 464 MLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPV 523 M++V+E SL +LE L+NMP+ P L+T Sbjct: 418 MVRVKETFDSLAMLEFALDNMPDTP----------------------LLTEGFSYK---- 451 Query: 524 MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVY 583 P + +EA +G + ++ + +R R R ++A+ + +RG+ VSD + Sbjct: 452 -PHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLI 510 Query: 584 LGSIDFVMSDVDR 596 +GS+D S DR Sbjct: 511 IGSLDPCYSCTDR 523 >UniRef50_C0AVB2 Putative uncharacterized protein n=4 Tax=Enterobacteriaceae RepID=C0AVB2_9ENTR Length = 101 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 70/98 (71%), Positives = 81/98 (82%), Gaps = 3/98 (3%) Query: 1 MTDLTAQE---PAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVG 57 MTD AQ+ PAW+T DH+DD V+ ELR +FGPDAFT Q TRTG+PVVW+KREQL+EV Sbjct: 1 MTDQIAQKGARPAWETTDHIDDQVVNELRQKFGPDAFTFQPTRTGMPVVWVKREQLIEVM 60 Query: 58 DFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVF 95 +LK LPKPYVMLFD+HG DERLRTHR+GLPAADF F Sbjct: 61 QYLKSLPKPYVMLFDMHGFDERLRTHRQGLPAADFFPF 98 >UniRef50_B2V8R2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=3 Tax=Aquificales RepID=B2V8R2_SULSY Length = 524 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 118/482 (24%), Positives = 207/482 (42%), Gaps = 59/482 (12%) Query: 122 TFTKLFPNANWYERETWDLFGITFDGHPNLR-RIMMPQTWKG--HPLRKDYPARAT-EFS 177 + + P NWYERE D+FG+ HP+ R ++ P+ + HPLRKD+ + EF Sbjct: 93 SLANIIPALNWYEREIRDMFGLVPLNHPDPRPLVLFPENFPSDLHPLRKDFDIKTRPEFK 152 Query: 178 PFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS--AHGAFRIVLQLDG 235 + + K+ E E + +GP H G FR L G Sbjct: 153 SYGKYEYKE-------------------VEGEGVFNILVGPIHAGIIEPGHFR--FSLAG 191 Query: 236 EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITV 295 E I+ + HRG EK+ E ++ + ++ + + YV A+EKL+ + Sbjct: 192 EHILQLEIRHFWKHRGVEKLAEGKTAEEVLEIVPKVSGDHSYAHTLAYVQAIEKLSNTEI 251 Query: 296 PDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMH 355 P R IRV+ +EL R+ +L ++ QDV F ++++ L +A+TG R + Sbjct: 252 PKRAKYIRVLFAELERLMCNLNDVAWLFQDVAYSFGAQGMFILKEEVMRLNKALTGNRFN 311 Query: 356 PAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEA 415 +IGGV+ DL + L+ + L ++ + Y+K + + R + + Sbjct: 312 KNVLKIGGVSVDLNQEKINLIIDKLGYITDKFEFYKKIIFDSASILDRFETTGRILYETV 371 Query: 416 LEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLR 475 E G RA+ + D+RK PY Y+ F DC+ R+ ++ ++ S+ Sbjct: 372 KELSCIGYTARASDLKSDIRKEHPYLIYDKLTFTSQTFEE-GDCFARLKCRLSDIEDSIS 430 Query: 476 ILEQCLNNMPEGP-FKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE-SFQMI 533 I+++ L+++P+G F +PL PAN + Sbjct: 431 IIKEVLSDLPDGEIFTQSNPL-----------------------------PANRWTLGYS 461 Query: 534 EATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSD 593 E +G Y++ +D R ++R PSF + Q I A+ G +V+D + S++ + Sbjct: 462 EGQRGNIMYFVKTDKEGKIDRLKIRDPSFNNWQAIQWAVLGDIVADFPLVNKSLNLSYAG 521 Query: 594 VD 595 D Sbjct: 522 TD 523 >UniRef50_C6A407 Membrane-bound hydrogenase MBH 1, subunit Mbh1L (NiFe hydrogenase catalytic subunit) n=4 Tax=Thermococcus RepID=C6A407_THESM Length = 430 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 105/396 (26%), Positives = 188/396 (47%), Gaps = 29/396 (7%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E ++ + +GP HP+ + ++ LDGE I+ +GY+ RG E + R+++ + Sbjct: 6 EYWVKIPIGPIHPALEEPEKFIITLDGERIIHVDIKLGYNLRGLEWIAMRRNYIQLLYLV 65 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +RI + + Y AVE++AGI VP+R IR ++ EL RI+SHLL + +G Sbjct: 66 ERICGICSFSHNHTYTRAVEEMAGIEVPERAEYIRAIIGELERIHSHLLNLGVVGHAIGY 125 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD-WMPKRL 387 T + ++ R+++ D++EAI G R++ A IGGV D+ R++ + + + + + Sbjct: 126 DTVLHLSWLARERVMDILEAIGGNRVNYAMNTIGGVRRDIEEKHKRMILDMIKHYREEVM 185 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 E+ L + ++ R + + ALE+ G R +GI DVR Y Sbjct: 186 PKVEEIFLYDPTVEARLRDAGVIPKRIALEYSAQGPTARGSGIKKDVRYNERLGVYPELG 245 Query: 448 FEIPV------GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 + P+ G D + R++++V EL QS+ I+E+ + MPEG K Sbjct: 246 IK-PITPKEFTGVIKGDVFDRMVVRVGELWQSMEIIEKAFDQMPEGKIK----------- 293 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD-GSTMSYRTRVRTP 560 T +T + EA +G +Y+ ++ G+ + + R P Sbjct: 294 --TFSKDNVTLTKLKKAE-------GAGIGRYEAPRGETIHYVRANPGTDTPAKWKAREP 344 Query: 561 SFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +F +L + A+ G ++D+ V + SID +S DR Sbjct: 345 TFPNLFAVARALVGEQLADVPVAIASIDPCLSCTDR 380 >UniRef50_B1ZSF2 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSF2_OPITP Length = 531 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 126/510 (24%), Positives = 210/510 (41%), Gaps = 49/510 (9%) Query: 89 AADFSVFYHLISIDRNRD-IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDG 147 A F V+Y L ++D ++++V + + + T NW ERE DLFG+ G Sbjct: 69 GAGFYVYY-LYAVDAAHGFVLVRVVVPAERPELISLTNAVHAVNWQEREIQDLFGLKLVG 127 Query: 148 HPNLRRIMMPQTW-KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGT 206 HPN RR ++ W + PLRKD+ + T+ PF + K R Sbjct: 128 HPNPRRCVLHDDWPEVFPLRKDFDLQ-TQLPPFSGERHK-----------------FREV 169 Query: 207 ENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 E + +GP H + + GE ++ + Y H+G EK+ E + Sbjct: 170 AGEGVFQVPVGPVHAGVIEPGHFLFSVAGEPVLYLQLRMFYVHKGTEKLFESLPITHGVR 229 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 + I + + A+E+ AG+ P R +R + EL RI++H+ I DV Sbjct: 230 LAESISGDSAFAHATAFCHAIERAAGVAAPPRGRALRTLCLELERISNHVADIGAICTDV 289 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 +T A ++++ E +TG R+ +GGV D L F+D + ++ Sbjct: 290 AFVTAQMHALRLKEQVLRWNEQLTGNRLLRGMACLGGVRFDFDSAQLDALAAFVDTLEQQ 349 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + ++ + R + A + G G RA+GID D+R+ P Y+ Sbjct: 350 FKDLVELIRSHSGTRDRLETTGVLAPAVARDLGIVGIAGRASGIDHDLRRDCPTDFYDQV 409 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 F +PV D R++++ EEL QSL I+ Q L MP G P+ P L Sbjct: 410 QFTVPVFTE-GDVQRRMVVRREELFQSLGIIRQVLAKMPGGAIAT--PVGDVPADRIALG 466 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 ++E W E F + T+ G+ ++ R +++ PS + Sbjct: 467 YVE---------GW-----RGEIFHWVH----------TAPGNRLA-RCKIKDPSLQNWP 501 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + AI G+++ D V S + S DR Sbjct: 502 ALSEAILGNIIPDFPVVNKSFNLSYSGTDR 531 >UniRef50_D1Y9R2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=3 Tax=Propionibacterium acnes RepID=D1Y9R2_PROAC Length = 382 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 109/392 (27%), Positives = 175/392 (44%), Gaps = 39/392 (9%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 + +L+LG HPS G I +D + I ++G HRG EK+ E + + Sbjct: 25 EVTWLDLGHLHPSRPGLVTITTTVDDDVITSSQVNVGNLHRGDEKLFEARGYRQIPMLAS 84 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF---IQDV 326 R ++ + E A+E GIT+P RV IR +L+E RI SH ++S D Sbjct: 85 RHDWTAPFIGETGAAHAIEDAMGITIPTRVAWIRTLLAEFSRITSHFTFLSWVGHHCDDA 144 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 G + A + ++I+ + +G R+HP RIGG+ W L E+LD Sbjct: 145 GLENAIATAIENARRIW---QRCSGNRIHPMITRIGGLRIHPESEWQPTLGEWLD-DANA 200 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 L ++ + AL T+ +GVA +G +G RA+G+D D R R + Y+ Sbjct: 201 LVTWLRTALDATV---GVRGVAVIPTNMIDRYGLSGPVSRASGVDLDTR--RRTAVYDEL 255 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP--EGPFKADHPLTTPPPKERT 504 + V D Y+R+ + S + Q L+ +P +GP + P T P+ RT Sbjct: 256 KWPEVVIEPRGDAYSRLATLCNDAAVSSSLCRQILDRLPNLDGPLETRLPTTIKAPRGRT 315 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 + IEA G Y L S GST +R +RTP+FA+ Sbjct: 316 -------------------------WTTIEAPWGRAGYLLESRGSTTPWRMALRTPTFAN 350 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +Q + A + G+ V D+ + S+ + + D+D+ Sbjct: 351 VQVLEAVLPGTRVDDVEATIASLGWTLGDLDK 382 >UniRef50_D1YVS8 Ech hydrogenase subunit E n=1 Tax=Methanocella paludicola SANAE RepID=D1YVS8_METPS Length = 360 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 104/384 (27%), Positives = 171/384 (44%), Gaps = 29/384 (7%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + GP HP R+ L DGE I D + GY HRG EK E ++ ++R+ Sbjct: 5 IQFGPQHPVWIEPLRLKLTTDGELIKDVDLEAGYVHRGLEKKFE-WDYNKAAYLSERVCA 63 Query: 274 LGGCVNEMPYVLAVE-KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 + + + L VE +AG+ +P R +IR ++ EL R++SH L I ++ +G Sbjct: 64 ICTQHHSTCFCLGVEGTMAGLELPRRAAIIRTIMLELERLHSHFLAIGLTLEAIGFENMF 123 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 F R+++ D+ E TG R+ +GGV ++ + + +F D + KR E+ Sbjct: 124 MLCFRHREQVLDVFERTTGNRVLHGINIVGGVTRNIGPEMAKEILDFCDDIEKRAHEIER 183 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 + + +K R QGV K A E G G R + + +DVR A P+ Y P+ Sbjct: 184 IIVSSYTIKQRMQGVGVMTEKMAKELGVVGPVARGSNVPYDVRHAAPHLLYREVKV-TPI 242 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 DC+ R +++V EL QS+ ++ Q + PL P E Sbjct: 243 VEKDGDCWARSLVRVRELFQSIDLIRQLV------------PLLDGTPDE---------- 280 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 + MP E+ +EA +G YY+ S R +VRT ++ + I I Sbjct: 281 ----LFAKSKAMPEGENIARVEAPRGELFYYVRGKKSKELDRVKVRTSTYGNGLGIAPLI 336 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 +GS ++D+ + + D + DR Sbjct: 337 KGSHIADVGLITITFDPCIGCFDR 360 >UniRef50_Q8TY43 Ni,Fe-hydrogenase III large subunit n=1 Tax=Methanopyrus kandleri RepID=Q8TY43_METKA Length = 409 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/383 (26%), Positives = 177/383 (46%), Gaps = 34/383 (8%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 +GPNHP RI L + GEE+VDC ++GY HRG EK+ E W +R+ + Sbjct: 31 VGPNHPILKEPLRIKLAVRGEEVVDCKVEMGYCHRGIEKIMEGMPWQKAAFLAERVCGIC 90 Query: 276 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 + M ++ VEKLA R +RV++ EL RI SHL+ + + + T + Sbjct: 91 SHAHNMCFIGGVEKLAEGDPAPRGLFLRVLVQELDRIQSHLIANAAYFYSIEHETMFVWN 150 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 R+++ D +E ITG R+ W +GGV D+ + E LD + + +Y + A Sbjct: 151 MNTRERVLDCIEEITGNRILTGWNVVGGVRMDVTEDQLNNVLETLDAIRDDVITYRRIAK 210 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI-DFDVRKARPYSGYENFDFEIPVGG 454 + +K RS+GV ++ G RA+G+ + D+R P Y F+ PV Sbjct: 211 NDPFIKLRSRGVGVITKDHIRKYRVVGPQARASGVPESDMRLQEPV--YPELGFK-PVYR 267 Query: 455 GVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITH 514 D R++++ +E QS+ ++E+ ++ +PEG + + Sbjct: 268 KEGDNLARILVRYDECLQSIELIERIVDELPEGRHRRE---------------------- 305 Query: 515 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRG 574 L+V+ G V +EA +G Y + + R +RTPS +++ + A G Sbjct: 306 -LEVNAGHV------DNRVEAPRGELVYDMELAPGGVVKRVTIRTPSVPNIRVLEAIAPG 358 Query: 575 S-LVSDLIVYLGSIDFVMSDVDR 596 S ++D + S+D ++ +R Sbjct: 359 SPSIADAVATYASLDPCVACNER 381 >UniRef50_C1TPP0 Ni,Fe-hydrogenase III large subunit n=2 Tax=Synergistaceae RepID=C1TPP0_9BACT Length = 413 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/389 (26%), Positives = 186/389 (47%), Gaps = 26/389 (6%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 L +GP H L ++GE I D V G HRG E M ++ I +R+ Sbjct: 9 LPIGPVHVGLKEPITAWLDIEGEHIKDAVIRPGAIHRGVEFMARERNPIQVIYLAERVCG 68 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + + + +V AVE A I VP R IR M+ EL RI+SH+L+ +G + Sbjct: 69 ICSFSHAIAFVKAVEDAAQIEVPIRAQYIRSMVLELERIHSHILWSGVACYTIGFDSAFH 128 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 R+K+ D++EA++G R++ A +GGV D+ R + + + + AS+ +A Sbjct: 129 LGMMLREKVMDVLEALSGNRVNYAVTTVGGVRWDVTPAVVRTVMDMIHYYRNEFASFYEA 188 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE--IP 451 A+ + ++K R + V ++A+++ G R +G+ DVR + PY Y + E +P Sbjct: 189 AINDPVVKARLRDVGVLTTEQAIKYCALGPTSRGSGVRADVRWSAPYDAYCDIHVEPVVP 248 Query: 452 ---VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 G D Y R +++V E+ QSL ILE+ + +PEG +T P + L Sbjct: 249 QDYTGEVHGDVYDRFLVRVYEVLQSLDILEKIMEGLPEG------SITFEPKVNKLL--- 299 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYR-TRVRTPSFAHLQQ 567 T++ V +G IEA +G +++ + + + +VR P++++ Sbjct: 300 -TVLKKAEGVGYG----------CIEAPRGDDTHAVGLKAQQENVQWWKVRAPTYSNAVS 348 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 P + + ++D + + SID +S ++R Sbjct: 349 WPLMFKDNELADAPLIINSIDPCISCMER 377 >UniRef50_A5GBN1 Ech hydrogenase subunit E n=20 Tax=cellular organisms RepID=A5GBN1_GEOUR Length = 359 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 93/384 (24%), Positives = 176/384 (45%), Gaps = 30/384 (7%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 + +GP HP L + E+++D +P I Y HRG E++ E++ + + DRI Sbjct: 6 IIPIGPQHPILPEPIHFDLVTEDEKVIDAIPSISYVHRGLERLVEKRDFIDFAHVADRIC 65 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 L ++ + Y AVE++ I VP R +R + +EL RI+SH+ ++ G + Sbjct: 66 GLCSFMHSLGYCQAVEEIMSIEVPQRALYLRSIWAELSRIHSHIFWLGAAADAFGFESLF 125 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 A R+ + D+ E TG R+ ++GGV D+ + + L + L Sbjct: 126 MQAMRLREPVLDIFEETTGGRVILGVCKVGGVRRDIDGDSLKGIVNRLTTLKGALEELSN 185 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 L + ++ R GV ++A G G RA+G+ D+R A Y+ Y+ + E PV Sbjct: 186 VFLNDYSVQHRLAGVGFLSREDAYTLGCVGPMARASGLAIDMR-ALGYAAYKYLEVE-PV 243 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 DC+ R +++ E+ ++ ++ Q + +P GP ++ + Sbjct: 244 VESAGDCHARCRVRIREIFHAIDLIRQAVGKIPAGP-------------------VDVKV 284 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 T P E + +E +G +Y+ +G+ R RVR P+F+++ + + Sbjct: 285 TG---------TPDGEYYSRVEQPRGEVIHYVKGNGARFLQRFRVRVPTFSNIPAMVKVL 335 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 +GS ++D+ + ++D +S +R Sbjct: 336 KGSQLADVPNIILTLDPCISCTER 359 >UniRef50_D1ICJ9 Whole genome shotgun sequence of line PN40024, scaffold_246.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1ICJ9_VITVI Length = 765 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/272 (34%), Positives = 135/272 (49%), Gaps = 23/272 (8%) Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y+ E + AVE+L VP R IRV+ E+ RI++H L ++T DVGA TP Sbjct: 51 YVSTMAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPS 110 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL--DWMPKRLASY 390 +A +R+K+ + E ++G RMH ++ R GGVA DLP G + L DW + Sbjct: 111 LWASEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCHVTCTELVADWA---FSLI 167 Query: 391 EKAALQNTILKGRSQGVA------AYGAKEALE----WGTTGAGLRATGIDFDVRKARPY 440 + L + K RS GA A E W GLR + +D R+A PY Sbjct: 168 KADPLAFLLSKSRSNRACPSPYPLCLGAGSAQERPVLWWYGRHGLRER-VCWDSRRAAPY 226 Query: 441 SGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPP 500 ++ D ++PVG D Y R +++EE+RQS+RI+ QC N MP G KAD PP Sbjct: 227 DVHDQSDPDVPVGTR-GDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPS 285 Query: 501 KERTLQHIETLITHFLQVSWGPVMPANESFQM 532 + + T I+ F VS+ PV P S + Sbjct: 286 RS-----LGTPISFFGAVSF-PVPPPRHSASL 311 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 8/104 (7%) Query: 501 KERTLQHI--------ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMS 552 K RTL+ I T I HF + G +PA ++ +EA KG +L S+GS Sbjct: 662 KPRTLRLIYRSRSSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEIGVFLVSNGSNRP 721 Query: 553 YRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR ++R P AH Q + + + + +D++ +G+ D V +VDR Sbjct: 722 YRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 765 >UniRef50_Q0W3I1 Ech hydrogenase, subunit E n=2 Tax=Euryarchaeota RepID=Q0W3I1_UNCMA Length = 359 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/383 (26%), Positives = 169/383 (44%), Gaps = 28/383 (7%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + GP HP R+ L LDGE + D + GY HRG EK E ++ +R+ Sbjct: 5 VQFGPQHPVWIEPIRLKLALDGELVKDVELEAGYVHRGLEKKFE-WDYNKAAYLAERVCG 63 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + + + LAVE + +P R VIR ++ EL R++SHLL I ++ +G Sbjct: 64 ICTQHHSTCFCLAVESTMKLEIPRRAAVIRNIMLELERLHSHLLAIGLTLEAIGFENLFM 123 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 F +R+ + D+ E TG R+ +GGV ++ + + +F D + KR E Sbjct: 124 LCFRNREIVLDVFERTTGNRVLHGINLVGGVTRNIGPEMAQEIMDFCDTIEKRCRDLEDM 183 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 + + +K R +GV + AL++ G R +GI +DVR PY Y + V Sbjct: 184 IVHSRTIKDRMKGVGILSKQTALDYSVVGPIARGSGIPYDVRIDAPYLLYGELKMKHVVE 243 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 G D + R +++V EL QS+ ++ Q + P+ P + Sbjct: 244 EG-CDVWARSIVRVRELFQSIDLIRQLV------------PMLEGLPDD----------- 279 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 ++ MP + F +E +G Y++ S R +VRT ++A+ + I+ Sbjct: 280 ---ILAKSKTMPDGDGFARVEPPRGELFYFVRGKKSKELDRVKVRTSTYANGPALIPVIK 336 Query: 574 GSLVSDLIVYLGSIDFVMSDVDR 596 G ++D+ S D + DR Sbjct: 337 GCQLADVGPITISYDPCIGCFDR 359 >UniRef50_A7I7D0 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=6 Tax=cellular organisms RepID=A7I7D0_METB6 Length = 526 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 131/509 (25%), Positives = 207/509 (40%), Gaps = 65/509 (12%) Query: 94 VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRR 153 VF H SI L ++ A N + +FP+A W ERE D++GI F+G + RR Sbjct: 75 VFSHAGSI-------LVLSRALNRKQATSIATIFPSATWPERECRDMYGIKFEGAFDTRR 127 Query: 154 IMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDF 211 +++ +T +PL K + + +P K T P E R + Sbjct: 128 LVLHETCPAGFYPLEK-----SVKNAPVATKK----------TVPPAEEYPFRTVSGDGV 172 Query: 212 MFLNLGPNHPS--AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 + +GP H G FR + GE + + + Y HRG EK+ E + + + + Sbjct: 173 YQVPVGPVHAGIIEPGHFR--FSVIGETVFNLEIRLFYTHRGIEKLAEGKDPAACVRVAE 230 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG-A 328 + N +A+E+L+GITVPDR IR +L E RI SHL +S + DV A Sbjct: 231 AVSGDESAANATGLCMAIERLSGITVPDRAWHIRTVLCESERICSHLGDLSGMLTDVAFA 290 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 + FA R++ + E ++G R GG++ D+P REFL K Sbjct: 291 LGASHFAVL-REEFFREQEKLSGSRFLRGMILPGGISRDIPVETLARYREFLARFAKEFR 349 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 + L + R TG RA+G DVR PY Y+ F Sbjct: 350 AGLAIVLSTPSVIDRFTQTGIIRKPLLGPLNITGPVARASGSGRDVRVDSPYGMYDRF-I 408 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGP-FKADHPLTTPPPKERTLQH 507 +P D R +K E+ SL ++E+ + MPEGP AD Sbjct: 409 PVPHPLNDGDVLARFTVKAAEVLDSLSLIEKVIAGMPEGPVISADG-------------- 454 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYL-TSDGSTMSYRTRVRTPSFAHLQ 566 + + ++E +G N ++ +G +R +VRT S+ + Sbjct: 455 ----------------VGDGAALALVEGPRGENLCWVEIREGRV--FRYKVRTASYCNWL 496 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 I A G++++D V S++ + D Sbjct: 497 AIEHAAPGNIIADFPVINKSLNLSYAGTD 525 >UniRef50_C7I0C0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Thiomonas intermedia K12 RepID=C7I0C0_THIIN Length = 532 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 114/491 (23%), Positives = 203/491 (41%), Gaps = 64/491 (13%) Query: 116 NDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRK----DYPA 171 D +P+ P WYERE DL+G+ F+GHP +++ + P D A Sbjct: 96 EDRTLPSLANKLPLLGWYEREMMDLYGLRFEGHPEPNPLVLHEGEPRDPAPLASGFDPAA 155 Query: 172 RATEFSPF-ELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIV 230 A +++P + Q +++ L F P + E+ F+F + Sbjct: 156 PARDYAPLPPIVPQVQGPDIQRLPFGPVRADI---VESAQFLFFYI-------------- 198 Query: 231 LQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKL 290 GE I+ P + Y HR E + + + +R+ + + + + AVE Sbjct: 199 ----GEGILHYHPRLFYKHRAMEGRFQGATLATGAVLAERVSGIDSVAHALAFAQAVEGA 254 Query: 291 AGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAIT 350 G P R +RV+L+EL R+ +HL Y+ + +++ + +T Sbjct: 255 MGWRAPPRARYLRVVLAELERLYNHLHYLGHLSKTTTLKVGEAEGHLLEERVKQINGRLT 314 Query: 351 GFRMHPAWFRIGGVAHDLP-RGWDRLLREFLDWMPKRLASYE--KAALQNTILKGRSQGV 407 G R GG+ DL G D+ L D + + L E ++ L + GR + Sbjct: 315 GSRFLRGLITPGGLRRDLDITGLDKALDSVNDEIDRYLQRLENTRSHLDRLMTTGRLERQ 374 Query: 408 AAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKV 467 A+ + G G RA+ +D D+R+ PY+ YE F +PV G D + R M+++ Sbjct: 375 VAF------DQGACGPIERASNLDRDLRRDHPYANYEKVRFSVPVQQG-GDAHARSMVRM 427 Query: 468 EELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPAN 527 EE+R+SL I+ Q + G E L ++ + P Sbjct: 428 EEIRESLAIIRQTIGRTKPG---------------------EVLRFDVMEDA----DPQG 462 Query: 528 ESFQMIEATKG--INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLG 585 E +EAT+G + + +L+ D + + R +++ PSF++ + P + S + D + Sbjct: 463 EGLGWVEATRGGLLYAVHLSEDRTRLQ-RVKIKEPSFSNWRVFPFTVEDSNMMDYAINEA 521 Query: 586 SIDFVMSDVDR 596 S ++ DR Sbjct: 522 SFGLSIAGADR 532 >UniRef50_Q609T9 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T9_METCA Length = 527 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 127/502 (25%), Positives = 197/502 (39%), Gaps = 68/502 (13%) Query: 107 IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW--KGHP 164 ++L+ L +P+ T FP A ER T DL G+ F GHP+ RR + Q W + P Sbjct: 80 LLLRTVLPPGRTGLPSHTPHFPGAARPERHTRDLLGLKFIGHPDDRRWVRHQAWGEREFP 139 Query: 165 LRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS-- 222 LR D+P + A+T +G + + +GP H Sbjct: 140 LRPDFPLAG---------------QPPAVTAPDRSYGFA-SAHGPEVNEIPVGPVHAGII 183 Query: 223 AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMP 282 G FR + GE +++ +GY H+G EK+ + R+ + Sbjct: 184 EPGHFRFLAL--GETVLNLEERLGYVHKGIEKLAVGRDPEGLARLAGRVSGDTTVGHAWA 241 Query: 283 YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKI 342 A+E AG+ P+R +R + E R+ +HL I D T F + ++ Sbjct: 242 ACQAMEHAAGVAPPERALWLRAIFIERERVANHLNDIGAICND----TAFAFGHSQFSRL 297 Query: 343 YDLVEAITGFRMHPAWF-------RI--GGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 +L R + WF RI GGVA DLP + + + L + Sbjct: 298 RELW-----LRDNLRWFGHRLLMDRIVPGGVAVDLPAEATSAMPAAMAALRSELEELKPI 352 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 ++TI + R G + E G G RA GI DVR+ P++ Y+ + V Sbjct: 353 LDESTIFQDRVVGAGVLSERIVRELGCLGYVARACGIGRDVRERAPHAPYDRLGVKA-VT 411 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 G D R+ ++ EEL SL IL+QCL + GP +AD TPP Sbjct: 412 RGDGDVAARLYVRYEELLASLDILDQCLRRIEPGPLRAD--WRTPPANA----------- 458 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 E ++E +G + Y+ DG+ R R PS + + I Sbjct: 459 --------------EGLGLVEGWRGEIATYVRFDGAGSIVRFFPRDPSVFNWPALEKLIL 504 Query: 574 GSLVSDLIVYLGSIDFVMSDVD 595 G++V D + S++ S D Sbjct: 505 GNIVPDFPLCNKSVNGSYSGHD 526 >UniRef50_Q57935 Uncharacterized protein MJ0515 n=17 Tax=Euryarchaeota RepID=Y515_METJA Length = 380 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 28/292 (9%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 +E+ + +GP HP RI L LDGE+ VD ++GY HRG EK+ E + H I Sbjct: 2 SENMATIPIGPIHPVLKEPLRIKLVLDGEKPVDAEIEMGYVHRGIEKIMEGKHCHKGIHL 61 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R+ + V+ M + +E ++ I +PD+ +RV+ EL RI+SHL+ + + + Sbjct: 62 AERVCGICSYVHTMTFAECIEHISKIEIPDKAKYLRVVTCELERIHSHLIASAVYNLSIE 121 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T + R+ I DL+E ITG R++ + IGGV D+ RE +D + K+L Sbjct: 122 HETLAMWLLNVREIIMDLMEMITGNRVNMGYNVIGGVRRDIN-------REMMDEIYKKL 174 Query: 388 ASYEKAALQNTI----------LKGRSQGVAAYGAKEALEWGTTGAGLRATGI---DFDV 434 +E L+N I L+ + G+ Y E + G R +G+ D+ + Sbjct: 175 DIFED-ELKNIIEVFETGPLIALRSKEIGILPY--HEVMRTRAVGPICRGSGLPESDWRL 231 Query: 435 RKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE 486 R +S Y+ F+ PV D + R+M++ EE+ +S+R++ + L + E Sbjct: 232 R----HSTYQELKFK-PVWREEGDNFARMMVRHEEIIESVRLIREALEHYEE 278 >UniRef50_UPI0001C42022 energy-converting hydrogenase B subunit N EhbN n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C42022 Length = 391 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 102/391 (26%), Positives = 183/391 (46%), Gaps = 45/391 (11%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + +G HP+A +R+ ++ E I D IG +HRG E++ E T++I Sbjct: 16 IQMGTVHPAALEPYRVRFFVEDEIIKDAEITIGVNHRGIERVMEGLPVEKANMLTEKI-- 73 Query: 274 LGGCVNEMPY--VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 G C N + V EK G+ VPDR IRV++ EL R++SHLLY+ + + T Sbjct: 74 CGICSNSHTWNSVRTAEKGLGVEVPDRAVYIRVIVGELERLHSHLLYLGHGCETLAHETF 133 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR--EFLDWMPKRLAS 389 F R+ I DL+ I G R+ IGGV +R+ R + +D + K + Sbjct: 134 SMRVFYIRETIMDLLAMIGGNRVQYGCSIIGGVRPRCELDDNRIQRILDGMDLVEKNVLD 193 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 + ++++++ R G ++AL+ +G LRATG+ D+R Y+NFD++ Sbjct: 194 FANRFVKDSVVASRISGTGYIPQEQALKLAVSGPTLRATGVKRDLRT--DMYEYDNFDYD 251 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 I + D +++++V E+ ++++I+ Q + ++PEG +R+ + I+ Sbjct: 252 I-ITQDTCDVQAQLLMRVFEIFEAIKIVRQAIRDLPEGKI-----------TDRSWEMID 299 Query: 510 T-LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR---VRTPSFAHL 565 T LI +++V G + + Y DG R R +RTPS +++ Sbjct: 300 TDLIESYIEVPRGTLYHS----------------YAIEDG-----RVRHCIIRTPSMSNI 338 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + A + ++D + + D + DR Sbjct: 339 GAMQYACIDNHITDGQLCIVQCDPCFTCSDR 369 >UniRef50_B9L8U2 Ech Hydrogenase, Subunit n=3 Tax=Epsilonproteobacteria RepID=B9L8U2_NAUPA Length = 361 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 94/382 (24%), Positives = 163/382 (42%), Gaps = 30/382 (7%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY-TDRIEYL 274 G H + + + E I D +IGY HRG EK + ++ +PY R+ L Sbjct: 9 FGSQHVALPEPVSFLFETQNEVITDVTVNIGYVHRGIEKAAITRFEYTQLPYLVARVCGL 68 Query: 275 GGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFF 334 + Y +EKL GI +++ +R+++ EL RI+SH+L + VG Sbjct: 69 CSITHAGAYTHGIEKLLGIETNKKIDYLRMLVVELDRIHSHMLANGHVAEVVGYENLFMQ 128 Query: 335 AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAA 394 F R+ + D++E ITG R+ + IGGVA D + + RE L + + Sbjct: 129 TFRYREDVMDILERITGNRVQYDYQIIGGVARDFDKETEDFAREKLLTLKANTEKLIEFF 188 Query: 395 LQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGG 454 + +++GV + A ++ G RA+G++ D R Y +E +++ Sbjct: 189 ENDYTFALKTKGVGTISKEMAEKFNAAGPIARASGLETDARAEYDYLPFEEVGYKLQTRT 248 Query: 455 GVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITH 514 D + R M++ +E+ S+ + L+ +PEG H Sbjct: 249 E-GDVWARNMVRFDEIMNSIEMCLNILDGIPEGE-------------------------H 282 Query: 515 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRG 574 ++V P E+F +EA +G YYL + + + R R+R P++A++ + G Sbjct: 283 RVKVKG---RPDGETFVRVEAPRGECFYYLKGNKTKVLERVRIRVPTYANIPVLKELFVG 339 Query: 575 SLVSDLIVYLGSIDFVMSDVDR 596 SD + S D MS R Sbjct: 340 EKYSDAQAIVLSFDPCMSCTAR 361 >UniRef50_B3DZF5 Formate hydrogenlyase subunit 5 n=8 Tax=Bacteria RepID=B3DZF5_METI4 Length = 535 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 104/400 (26%), Positives = 163/400 (40%), Gaps = 30/400 (7%) Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 +L +DR + L + P+ +P+A ER +DLFG+ G + R + Sbjct: 88 YLALLDRGGSKISLFGLQVPEGKFPSVAVAYPSAARLERALYDLFGLQAQGSLDSRPWLD 147 Query: 157 PQTWKGH-PLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLN 215 W P+ YP D E + +F P E + Sbjct: 148 HGKWGVRFPMGDSYP----------------DGEEKLYSFFP--------ARGESLHQVP 183 Query: 216 LGPNHPS--AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +GP H G FR + GE +V +GY H+G E + S + RI Sbjct: 184 VGPVHAGIIEPGHFRFTMS--GEIVVRMEERLGYTHKGIESLFSGASIDKGMEIAGRISG 241 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 Y LAVE+ GI+ P R IR +++EL R+ +H + D + Sbjct: 242 DSTVAYAYGYALAVEEALGISPPPRAEWIRALMAELERMANHFGDVGAICNDAAFPRILS 301 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 R+KI ++ G R+ +GGV DL +RE L+ + + + + Sbjct: 302 RCALLREKILRCAQSCFGHRLMRDKIVVGGVKEDLNAEGLSRIRELLETIKEEVVCLKDF 361 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 L+ R+ G + A +G G RA+G +FD RKA Y Y++ FE+PV Sbjct: 362 YDSKNSLQDRTVGTGVLDRRLAELFGAGGFIGRASGRNFDSRKAFAYKPYDSLSFEVPVL 421 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH 493 D RV +++ E+ QS+++LEQ L MP G A+ Sbjct: 422 ED-GDVNARVWIRILEIEQSVKLLEQILEGMPPGSICAER 460 >UniRef50_A3CUR5 NADH dehydrogenase (Ubiquinone) n=3 Tax=Methanomicrobiales RepID=A3CUR5_METMJ Length = 362 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 86/352 (24%), Positives = 159/352 (45%), Gaps = 33/352 (9%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 LGP HP R+ + GE ++ ++GY +G E++ + W + +R+ + Sbjct: 11 LGPMHPCWKEPVRLKCETAGERVLKTELELGYMKKGIERIMRGRPWQEVMFLAERVCGIC 70 Query: 276 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 V+ M ++ +E+++ I VP R +RV+++EL R+ SH+L ++ + T + Sbjct: 71 SVVHNMVFIETMEEISDIPVPPRAAYLRVVVNELDRMASHILANFSYCYTIEHETLAMYL 130 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 R+ + D +E ITG R++ A+ GGV DL L L + + + Y + Sbjct: 131 LNIRETVLDNLERITGSRINTAYMIPGGVRFDLLPEDAAALLADLAKVEEEMKRYVRIFE 190 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI-DFDVRKARPYSGYENFDFEIPVGG 454 ++ RS+G+ +EA+ T G RA+G+ D D+R P Y F + Sbjct: 191 TGPLIALRSKGIGYMSREEAIRAHTVGPTARASGVEDSDLRLRHPT--YRELGF-TQITR 247 Query: 455 GVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITH 514 D + RVM++ +E+ QS+ ++ +C+ +PEGP + Sbjct: 248 TEGDNFARVMVRFQEVFQSIDLIRKCVETLPEGPIRG----------------------- 284 Query: 515 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 G + A E+ EA +G +Y + +D +RTPS +++ Sbjct: 285 ------GGLCKAGEASYAGEAPRGELTYTIKTDEYGRVVDIAIRTPSIMNIE 330 >UniRef50_A7NIW0 NADH-quinone oxidoreductase subunit C n=6 Tax=Chloroflexi (class) RepID=NUOC_ROSCS Length = 174 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 94/162 (58%), Gaps = 8/162 (4%) Query: 17 LDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHG 75 LD+P + PDA + G V ++ E++++V FL+ P+ Y L +L G Sbjct: 3 LDNPTVLARLQAALPDALLGSSEFRGDLSVHVRPERIVDVARFLRDDPELRYHFLENLCG 62 Query: 76 MDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYER 135 +D R R F V YHL+S I LKV ++E + VP+ T+L+P AN++ER Sbjct: 63 VDYLGREPR-------FEVVYHLLSFANRHRICLKVGVSERNPSVPSLTELWPGANYHER 115 Query: 136 ETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 177 ET+D+FGI F GHP L RI+MP+ W+GHPLRKD P A E + Sbjct: 116 ETFDMFGIVFTGHPCLDRILMPEDWEGHPLRKDVPLGAEEVA 157 >UniRef50_C1XWY7 Ni,Fe-hydrogenase III large subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY7_9DEIN Length = 426 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 118/480 (24%), Positives = 198/480 (41%), Gaps = 67/480 (13%) Query: 121 PTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE 180 P+ + FP +W+ERE W+ G+ +GHP+L+ PLR + + + P Sbjct: 8 PSLAEEFPALDWFERELWEDHGLVPEGHPSLK-----------PLRNHHSVYSRQAVPKG 56 Query: 181 LTKAKQDLE-MEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS--AHGAFRIVLQLDGEE 237 + + + +E L P +GP H G FR + GE Sbjct: 57 IVRLPYPFDRVEGLHEVP------------------VGPVHAGIIEPGHFR--FSVLGER 96 Query: 238 IVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGG--CVNEMPYVLAVEKLAGITV 295 I+ +GY HRG E++ + +S + +R GG + + + AVE G+ V Sbjct: 97 ILHLEVRLGYQHRGVEQLFQGKSLEQALLLAERA---GGEPVAHALAFCQAVEAALGVEV 153 Query: 296 PDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMH 355 P R +R +L EL R+ HL +++ D+G R + +E +TG R Sbjct: 154 PPRAYRLRRVLLELERLFGHLGHLAGLFTDIGYAYAATQVGKVRALLQGQLERLTGHRYG 213 Query: 356 PAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEA 415 +GGV D+ +R L + ++ AAL++ ++ R + V +A Sbjct: 214 RNALTVGGVGFDIDPETQVEVRGALAKLAAEAETHLAAALKHPMVLDRLRYVGTLTQAQA 273 Query: 416 LEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLR 475 G G RA G+ D+R+ Y+ F + GG D R + EELRQ Sbjct: 274 RWLGLVGPAARACGLGRDLRQDDAL--YQTFTPVVRSGG---DVLARAQVYAEELRQGFV 328 Query: 476 ILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEA 535 L++ L +P+G A+ P TTP PV E++ +EA Sbjct: 329 YLDRFLGALPQGEV-ANGP-TTP--------------------RVDPVPATAEAYSRVEA 366 Query: 536 TKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +G Y++ G+ + R ++ PSF + + + A+RG + D + S D + D Sbjct: 367 GRGELFYWVRLRGNRVE-RVKIVDPSFKNWRALELAVRGMGLPDFPIINKSFDLSYAGCD 425 >UniRef50_Q2NED9 EhbN n=5 Tax=Methanobacteriaceae RepID=Q2NED9_METST Length = 383 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 97/389 (24%), Positives = 177/389 (45%), Gaps = 41/389 (10%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +N+G HP+A +R+ L ++ E + D +G +HRG E++ E T+++ Sbjct: 23 INMGTVHPAALEPYRVRLFVEDEIVKDAEITVGLNHRGIERIMEGLPVEKANALTEKV-- 80 Query: 274 LGGCVNEMPY--VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 G C N Y E GI +P+R +RV+ EL R++SH+LY+ + + T Sbjct: 81 CGICSNGHIYNSCRVGEGALGIEIPERAVYLRVLAEELERLHSHMLYLGHGSEVLCHETF 140 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA--HDLPRGWDRLLREFLDWMPKRLAS 389 F R+ + DL+ + G R+ +GGV DL + + + +D++ +++A Sbjct: 141 AMRIFYIRESVMDLLYMMGGNRVQYGISVLGGVRPRADLNLKEQQRVLDTMDYIDEKVAD 200 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 + + + + ++ R G K+AL+ TG LRATG ++D R YE F+F+ Sbjct: 201 FAERFIADPMVMHRITGTGELSQKQALDLHVTGPSLRATGYEYDFRT--EMFEYEPFEFD 258 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 I G D ++++ E+ +S +I+ Q + N+P+GP Sbjct: 259 IITQDG-GDVRANILMRATEIFESTKIIRQVIKNLPKGP--------------------- 296 Query: 510 TLITHFLQVSWGPV-MPANESFQMIEATKGINSY-YLTSDGSTMSYRTRVRTPSFAHLQQ 567 + W V P +S+ IE +G+ + Y DG + +RTPS +++ Sbjct: 297 -----IVTRDWDLVDSPVYKSY--IEVPRGVCYHSYGLEDGKVR--HSIIRTPSMSNIGA 347 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G + D + + S D + DR Sbjct: 348 MQESCIGHPIQDAQLAIVSCDPCFTCTDR 376 >UniRef50_Q7G6A6 NAD, putative n=3 Tax=Magnoliophyta RepID=Q7G6A6_ORYSJ Length = 352 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 7/225 (3%) Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 +R LR L +RL +Y +N I R +GV +EA+ WG +G LRA+GI + Sbjct: 132 ERGLRRLLG-KRQRLLAYLAKKNRNPIFLERVEGVGFISGEEAVNWGLSGPMLRASGIQW 190 Query: 433 DVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD 492 D+RK Y Y FD+++ D R ++++ E+R+S++I++Q + +P GP++ Sbjct: 191 DLRKVDLYESYNQFDWKVQWQK-EGDSLARYLVRIGEMRESIKIIQQAVEKIPGGPYENL 249 Query: 493 HPLTTPPPKERTLQHIETLITHFLQVSWGP--VMPANESFQMIEATKGINSYYLTSDGST 550 K E FL P + E + +EA KG YL D S Sbjct: 250 EVRCFKKAKNSEWNDFEY---RFLGKKPSPNFELSKQELYARVEAPKGELGIYLVGDDSL 306 Query: 551 MSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +R ++R P F +LQ +P ++ ++D++ LGSID +M +VD Sbjct: 307 FPWRWKIRPPGFINLQILPQLVKKMKLADIMTILGSIDIIMGEVD 351 >UniRef50_Q0F384 Hydrogenase subunit n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F384_9PROT Length = 532 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 123/497 (24%), Positives = 197/497 (39%), Gaps = 54/497 (10%) Query: 104 NRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW--K 161 +R +L+ LA + +P+ + + A ER D+FGI P+ R + + W + Sbjct: 84 HRHTLLRTPLAAENPELPSISGHYIAACRMERHMQDMFGIHITDIPDPRPWIKHEHWPRE 143 Query: 162 GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHP 221 +PLR D+ AR P L +A D + ++ G+E + +GP H Sbjct: 144 AYPLRVDFDAR-----PPLLAEAHGDYDY-----------VRSGSEG--VYEIPVGPVHA 185 Query: 222 S--AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 G FR + GE I++ +GY H+G E+ + +S + RI + Sbjct: 186 GIIEPGHFRFLAV--GEHILNMEERLGYVHKGIERAMQSKSAEEGLKVASRISGDSTVAH 243 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDR 339 + A E I VP R + IR +L E RI +H+ I D + R Sbjct: 244 AWAFAQACEYAGQIDVPRRASFIRAILCERERIANHIGDIGAVCNDAAFAFMLHQMHRLR 303 Query: 340 QKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTI 399 + + L + G R+ GGV DL LLRE + + + Sbjct: 304 EDMARLHLELFGHRLLMNTLIPGGVLVDLGERAIGLLREQTLAIANEVEHLRAIYADHPS 363 Query: 400 LKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDC 459 ++GR G ++A + G G RA+G D R Y+ Y+ + +P G + D Sbjct: 364 IQGRVIGSGMVPVEDAQDIGLLGYVGRASGHYPDERIEEAYAPYDELEVNVP-QGKLGDV 422 Query: 460 YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVS 519 TRV ++ EE+ +S R++ + L MPEGP A+ Sbjct: 423 ATRVWVRFEEIAESSRLISELLEKMPEGPIVAN--------------------------- 455 Query: 520 WGPVMPANESFQMIEATKG-INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVS 578 W P P F IE +G I ++ +G + R VR PS + + A+R V Sbjct: 456 WLPPEPGVSGFAAIEGWRGEIAAWVRFGEGGQID-RCFVRDPSVINWLGLELAVREVPVP 514 Query: 579 DLIVYLGSIDFVMSDVD 595 D + S + S D Sbjct: 515 DFPLNNKSFNCSYSGND 531 >UniRef50_C6PUG2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG2_9CLOT Length = 526 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 123/489 (25%), Positives = 194/489 (39%), Gaps = 64/489 (13%) Query: 119 HVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW--KGHPLRKDYPARATEF 176 + TF + ++ +ERE DLFG+ + R+I+ + W +PLRK +P Sbjct: 91 EIKTFQDILFQSHLFEREMCDLFGLKIKDGIDTRKIVKHEKWPEDVYPLRKSFPY----- 145 Query: 177 SPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAH--GAFRIVLQLD 234 AK + + E L +K +E + +++GP H G FR + Sbjct: 146 ------GAKLEEKNEILPYKCKEAFGDGAYQ------ISVGPVHAGIIEPGHFR--FSVI 191 Query: 235 GEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT 294 GE I + + Y HRG EK+ E +R+ Y L VEKL Sbjct: 192 GEAIENLELRLNYKHRGIEKICENVDASKLNLVFERMACESSAAYAESYALLVEKLLSYD 251 Query: 295 VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV--FFAFTDRQKIYDLVEAITGF 352 P + +RV+L EL RI + L IS D+G P F AF ++I+ L E ITG Sbjct: 252 TPQEIKALRVVLLELERIYNFLGDISGICVDIGFSYPAKRFGAFG--EQIHKLCERITGS 309 Query: 353 RMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGA 412 R G+ D + +++ L+ M KR+ + L + R + Sbjct: 310 RFMRNVIIPCGINIDFTKEHIEDIKKTLNGMKKRMDKIIEITLDSVSFLDRVENTGIVRN 369 Query: 413 KEALEWGTTGAGLRATGIDFDVRKARPYSGY-----ENFDFEIPVGGGVSDCYTRVMLKV 467 K A + TG RA+GI++DVRK+ PY Y N EI GGV + R LK+ Sbjct: 370 KTAKKLYMTGITGRASGINYDVRKSFPYEIYGILKKNNNTLEI---GGV---FERYKLKI 423 Query: 468 EELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPAN 527 +E+ + + L+ + + K T F ++ Sbjct: 424 KEIYDAYNFIFASLDFINKDILKTK--------------------TEF------KLVEET 457 Query: 528 ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSI 587 E+ +E KG Y R +TPS + + A+ G +V D + S Sbjct: 458 EALAAVETVKGELIVYGKVGKDNKFNRIYFKTPSVTNWNGLTYAVLGEIVPDFPLCNKSF 517 Query: 588 DFVMSDVDR 596 + S+ D+ Sbjct: 518 NMSYSENDK 526 >UniRef50_Q1PWG9 NADH-quinone oxidoreductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWG9_9BACT Length = 166 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 13/156 (8%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKK---LPKPYVMLFDLH 74 +D +I +++ F P+A T G IK+E +++V +F KK L Y L D+ Sbjct: 3 NDSIITLVKSHF-PEAITDCYDFRGELTFVIKKEHIMQVAEFFKKNEELECDY--LSDVC 59 Query: 75 GMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYE 134 G+D + G+ F V YHL S+ + + LKV + ++ + T T ++ ANW+E Sbjct: 60 GVD---KIETNGV----FEVVYHLYSMQKKHRVRLKVPVPSDNPTISTVTHIWKTANWHE 112 Query: 135 RETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 RET+D+FGI F GHP+LR+I+MP+ ++GHPLRKDYP Sbjct: 113 RETYDMFGIQFQGHPDLRKILMPEDFEGHPLRKDYP 148 >UniRef50_C1RIP5 NADH dehydrogenase subunit C n=2 Tax=Actinomycetales RepID=C1RIP5_9CELL Length = 309 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 7/124 (5%) Query: 48 IKREQLLEVGDFLKKLPKPYVMLFDLH-GMDERLRTHREGLPAADFSVFYHLISIDRNRD 106 + RE L+EV L+ P + F+L G+ H G + Y ++S+ R Sbjct: 169 VAREHLVEVVQQLRDDPD---LRFELSLGVSGVHFPHDAGR---ELHAVYQIVSVTHGRR 222 Query: 107 IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLR 166 + L+VA+ E D HVP+ T ++P +W+ERETWD FGI FDGHP L RI MP W GHP R Sbjct: 223 LRLEVAVPEGDPHVPSTTAVYPANDWHERETWDFFGIVFDGHPGLARIQMPDDWPGHPQR 282 Query: 167 KDYP 170 KDYP Sbjct: 283 KDYP 286 >UniRef50_Q3ZW31 Hydrogenase, group 4, HycE subunit n=3 Tax=Dehalococcoides RepID=Q3ZW31_DEHSC Length = 526 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 114/489 (23%), Positives = 194/489 (39%), Gaps = 52/489 (10%) Query: 111 VALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 V + D V + +FP+A ++ERE D +G F+ + RR+ + +T YP Sbjct: 85 VIIRRADSPVSSIAAIFPSACYFEREIRDGYGCEFENAFDRRRLFLHET---------YP 135 Query: 171 ARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS--AHGAFR 228 A F P + Q L + A + K+ E + +GP H G FR Sbjct: 136 A---NFHPLANSFKNQPLSLPAGVENEALYPFKK-ISGEGVYEVGVGPVHAGIIEPGHFR 191 Query: 229 IVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVE 288 GE I++ + Y HRG EK+ + + + I N Y AVE Sbjct: 192 --FSAIGEPILNLEVRLFYTHRGLEKLAMGKDIDFGLKIAEGISGDESAANTYAYSSAVE 249 Query: 289 KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEA 348 + P R +R++L E+ R+ SHL +S + DVG R+++ + Sbjct: 250 HICSSRPPRRAEQLRLILLEMERLYSHLADLSGMLTDVGYPVGAASLSALREELMRWNKR 309 Query: 349 ITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVA 408 +TG R GG+ D+P L ++L R + + AL T + R + Sbjct: 310 LTGSRFLKGIIAPGGLLKDIPGELITELADYLYAFEGRFSEQVEKALAKTSVVDRFETTG 369 Query: 409 AYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVE 468 + + TG RA+G D R +PY Y F++PV D R +++ Sbjct: 370 IVNNRLLIPLNITGVTARASGEAIDTRLNQPYGFYPELSFKLPV-LPEGDVMARFRVRLS 428 Query: 469 ELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 528 E++ SL ++ + + G + P+ P N Sbjct: 429 EVQTSLGLILKTAAKLSAGEYAI------------------------------PLKPVNG 458 Query: 529 -SFQMIEATKGINSYYL-TSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 S ++E+ +G + ++L DG Y +VRT S+ + Q I A+ G ++ D + S Sbjct: 459 YSLVLVESPRGQSLHWLWLRDGKIERY--KVRTASYCNWQAIEHAVLGDIIPDFPLINKS 516 Query: 587 IDFVMSDVD 595 ++ + D Sbjct: 517 LNLSYAGTD 525 >UniRef50_B2HHH7 Formate hydrogenase HycE n=3 Tax=Actinomycetales RepID=B2HHH7_MYCMM Length = 498 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 119/504 (23%), Positives = 203/504 (40%), Gaps = 77/504 (15%) Query: 92 FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL 151 V Y L++ +R + L + + VP+ +L A +ERE DL+GI+ GHP Sbjct: 41 LRVVYLLVAGQPDRRVELTLRTGAANPSVPSLAELSIPAGRFEREMMDLYGISPVGHPQP 100 Query: 152 RRIMM----PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTE 207 RR++ PQ W HP+R+D A + PF+ + + E Sbjct: 101 RRLVRHAHWPQDW--HPMRRD----AGDPPPFDAVGRFPFVTV----------------E 138 Query: 208 NEDFMFLNLGPNHPS--AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS---WH 262 + +GP H G FR + GE I+ + + HRG EK+ E ++ Sbjct: 139 GPGVYEIPVGPVHAGLIEPGHFR--FSVIGESILRLKARLWFVHRGVEKLFEGRNALGAR 196 Query: 263 SYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF 322 + +RI + + + LAVE G+ VP+ V+ +R +L EL R+ +H+ + Sbjct: 197 EAVELAERISGDSSAAHSLAHCLAVEDALGLDVPEPVHRLRALLVELERLYNHVTDLGAL 256 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA-HDLPRGWDRLLREFLD 381 DVG A R+++ + +TG R+ A GGV +LP + L Sbjct: 257 ANDVGFALANAHAQGIRERVLRINRRVTGHRLLRAAMAPGGVVLQELPDPAE------LH 310 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + +A + L+N+++ R A +++A G G RA+GI D R P + Sbjct: 311 AVAAEVAEISELTLRNSVVYDRFAETAVLHSEDARALGCLGYVARASGIATDARLDHPTA 370 Query: 442 GYENFDFEIP---VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT-- 496 E+P V G D R ++ +E S+ + + N H T Sbjct: 371 -------ELPVTAVAAGGGDVLARYTIRRDEFAASVALACHLVEN--------HHGRTRF 415 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 PPP + T ++E +G + + DG+ R + Sbjct: 416 APPPAANGARSAVT-----------------SGVGIVEGWRGAVLHRVEVDGAGRITRCK 458 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDL 580 + PS+ + +P A+ ++V D Sbjct: 459 IVDPSWFNWPALPVAMADTIVPDF 482 >UniRef50_A1SE29 NADH-quinone oxidoreductase subunit C n=166 Tax=Bacteria RepID=NUOC_NOCSJ Length = 250 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 72/132 (54%), Gaps = 23/132 (17%) Query: 48 IKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLR---------THREGLPAADFSVFYHL 98 ++RE LL V L+ DERLR H + YHL Sbjct: 110 LRREDLLPVAQVLRD--------------DERLRFEFCAGVSGVHYPDETGRELHAVYHL 155 Query: 99 ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQ 158 +S+ NR I L+VA+ + D H+P+ ++P +W+ERET+D+FGI FDGHP L RI+MP Sbjct: 156 LSMTHNRRIRLEVAVPDADPHIPSIVPVYPTNDWHERETYDMFGIIFDGHPALTRILMPD 215 Query: 159 TWKGHPLRKDYP 170 W GHP RKDYP Sbjct: 216 DWPGHPQRKDYP 227 >UniRef50_B5YKI4 NADH-quinone oxidoreductase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKI4_THEYD Length = 177 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 8/154 (5%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDER 79 +I +R++F + R +V +K+E++ ++ LK P+ + L DL +D Sbjct: 6 IIKRIRDKFSDEVLWFICFRDECSIV-VKKEKIKDILSHLKNTPELEFDYLIDLTAVDYL 64 Query: 80 LRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWD 139 G F V YHL+SI I +K + E + + L+ ANW+ERE +D Sbjct: 65 ------GFREPRFDVVYHLMSIKHKHRIRIKAQVPEQGCCIDSVADLWATANWFERECYD 118 Query: 140 LFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARA 173 +FGI F GHP+LRRI+MP+ W G PLRKDYP ++ Sbjct: 119 MFGIEFTGHPDLRRILMPEDWNGFPLRKDYPVKS 152 >UniRef50_C8XAS3 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAS3_NAKMY Length = 506 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 115/496 (23%), Positives = 194/496 (39%), Gaps = 63/496 (12%) Query: 94 VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRR 153 V Y ++ + L + D H+P+ L A +ERE DLFGI DGHP R Sbjct: 49 VVYVFTRAGTDQRVELTLRCDPADPHLPSLAGLSFPAGRFEREIRDLFGIVPDGHPMPSR 108 Query: 154 IMM----PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENE 209 ++ P+ W HP+R+D A PF R E Sbjct: 109 LVRHFHWPRGW--HPMRRD----AGPPPPFGDVDGPYPF---------------RTVEGP 147 Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 + +GP H G + GE +++ + + HRG EK+ ++ + + + Sbjct: 148 GVYEIPVGPVHAGMIGPGHFRFSVVGETVLNLKARLWFVHRGLEKLFAGRAVAAGVELAE 207 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R+ + + YV AVE +G+T+ IR +L EL R+ +H+ I DVG Sbjct: 208 RVSGDTTVGHALAYVRAVEDASGVTLDPAAQRIRAILLELERLYNHIGDIGALANDVGHG 267 Query: 330 TPVFFAFTDRQKIYDLVEAITGFR-MHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 A R+++ + +A+TG R M A G LP + L + A Sbjct: 268 ILNNHALRIRERLLRINDAVTGHRLMRGAIVVGGVRVRVLPDAGE------LAAVAADCA 321 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 AL +++++ R G A ++A++ GT G RA+G+ D R P G Sbjct: 322 EVVDLALGHSVVRDRFTGTAMLSHRQAVDLGTLGYVARASGVAVDARFDHPVPGLVYDPA 381 Query: 449 EI----PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 E P G D +R +++ +E++ S+R++ + T P+E Sbjct: 382 ERLSTHPTDG---DVASRFLVRAQEIQSSVRMIAALAGQ-----------VDTTAPRE-- 425 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 + S ++E +G + + D R R+ PSF + Sbjct: 426 -----------VGGSTSSAAGVRAGVGIVEGWRGTIVHRVELDADGRLTRVRIVDPSFFN 474 Query: 565 LQQIPAAIRGSLVSDL 580 +P A+ ++V D Sbjct: 475 WPALPLAMADTIVPDF 490 >UniRef50_Q0EZQ7 NADH-quinone oxidoreductase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZQ7_9PROT Length = 210 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 8/173 (4%) Query: 1 MTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFL 60 MT+ Q+ T + P + LR RFG V+A P V + RE + E +L Sbjct: 6 MTEEKLQDDIGVTAETALPPEVDGLRKRFGDQVLDVEAG-LDCPSVTLARECIAEACHYL 64 Query: 61 KKLPKPYVMLFDLHGMDERLRTHREGLPA--ADFSVFYHLISIDRNRDIMLKVALAENDL 118 K + + D+ G+D R+ G PA F V Y L+S+ RN I LKV E DL Sbjct: 65 KG-EHSFEQVMDICGVD---RSDYRGWPADAPRFQVVYQLLSVSRNCRIRLKVGANERDL 120 Query: 119 HVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPA 171 V + T+++P ANW+ERE +D++GI F+ HP+LRR++ ++G+PLRKD+P Sbjct: 121 -VDSVTEVWPTANWFEREAFDMYGIIFNHHPDLRRLLTDYGFEGYPLRKDFPV 172 >UniRef50_Q1IS34 NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IS34_ACIBL Length = 165 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 88/168 (52%), Gaps = 14/168 (8%) Query: 8 EPAWQTRDHLDD-PVIGELRNRFGPDAFTVQATR--TGVPVVWIKREQLLEVGDFLKKLP 64 EPA + L D P + +L D+ V+ + +W+ RE L++ L+ Sbjct: 4 EPAITDVEQLKDKPALAKL---LASDSIVVEQVKWDRDELSIWVSRESLVDAVKLLRDSS 60 Query: 65 KP-YVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTF 123 + + L D+ D R F V YH +SI R + LKV L +D V + Sbjct: 61 ETQFTFLSDVTCTDWYPSEPR-------FEVSYHFLSIPRKDRVRLKVKLLGDDAQVDSL 113 Query: 124 TKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPA 171 +FP+ N++ERE +DLFG+ F GHPNL RIMMP+ WKGHPLRKDYP Sbjct: 114 FSVFPSCNFFEREVFDLFGVRFHGHPNLARIMMPEDWKGHPLRKDYPV 161 >UniRef50_D2QGQ3 NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGQ3_9SPHI Length = 166 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 7/123 (5%) Query: 49 KREQLLEVGDFLKKLPKPYV-MLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDI 107 R+Q++ + FLK+ P + L D+ + H +F V YHL S+ +N I Sbjct: 34 SRDQIVSLVKFLKEHPTLQISFLTDITAI------HYPDSAGKEFCVVYHLHSLTKNFRI 87 Query: 108 MLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRK 167 +KV L +DLH+PT LF ANW ERET+DLFGI FDGHP+LRRI+ + HP+RK Sbjct: 88 RIKVYLTTDDLHIPTLIPLFAGANWMERETFDLFGILFDGHPDLRRILNMEEMDYHPMRK 147 Query: 168 DYP 170 +YP Sbjct: 148 EYP 150 >UniRef50_Q9G4B8 NADH-ubiquinone oxidoreductase n=1 Tax=Thraustochytrium aureum RepID=Q9G4B8_9STRA Length = 194 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 9/139 (6%) Query: 48 IKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRD 106 IK+E+LLEV FL K Y +L D+ +D +R F + Y+L+S+ N Sbjct: 30 IKKEKLLEVLVFLAKHTNCNYTILSDITVVDYPKNNNR-------FEIIYNLLSLTNNHR 82 Query: 107 IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLR 166 + +K+ N VP+ LF NANWYERE +D+FGI F GHP+LRRI+ ++GHPLR Sbjct: 83 LFVKIQTNSN-WFVPSMVTLFSNANWYEREAFDIFGIFFSGHPDLRRILTDYGFEGHPLR 141 Query: 167 KDYPARATEFSPFELTKAK 185 KD+P F+ K + Sbjct: 142 KDFPLNGFNEVRFDFEKKR 160 >UniRef50_B9L171 NADH-quinone oxidoreductase n=2 Tax=Thermomicrobia (class) RepID=B9L171_THERP Length = 204 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 91/165 (55%), Gaps = 9/165 (5%) Query: 11 WQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVM 69 W D P + +R RF PDAF + + R L +V DFL+ P+ Y Sbjct: 22 WGPTDPEQHPAVRLVRERF-PDAFEEATVFRDEMTIRVARPALRDVVDFLRLHPELRYNH 80 Query: 70 LFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPN 129 L D+ +D L RE F V HL SI R + + +K + + ++ VP+ +F Sbjct: 81 LTDITAVD--LLYLRE---RPRFDVVVHLYSIPRRQRLRVKCGVDDGEM-VPSLVPIFAG 134 Query: 130 ANWYERETWDLFGITFDGHPNLRRIMMPQTW-KGHPLRKDYPARA 173 ANW ERE +D+FGI F+GHP+LRRI++P+ W +GHPLRKDYP R Sbjct: 135 ANWLERECYDMFGIVFEGHPDLRRILLPEDWDEGHPLRKDYPLRG 179 >UniRef50_D2L9H0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9H0_9DELT Length = 494 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 106/462 (22%), Positives = 176/462 (38%), Gaps = 60/462 (12%) Query: 121 PTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE 180 P+ T P +W+ERE ++ +GI DGHP L+ P+R P A P Sbjct: 75 PSLTPDCPQCHWFERELYEQWGILPDGHPWLK-----------PIRFTTPPGAGRPRPAP 123 Query: 181 LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVD 240 ++ RG E + + +GP H Q GEE+ Sbjct: 124 GVT---------------DYFQVRGEEVHE---VAVGPVHAGIIEPGHFRFQCFGEEVFH 165 Query: 241 CVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVN 300 +G+ HRG E M + + + + + + +E L+G T P R Sbjct: 166 LEISLGFQHRGIEAMLAGGPDPRTVHFMETAAGDTSIGHSLAHAAVIEALSGRTAPPRGR 225 Query: 301 VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFR 360 I EL R+ +H + DVG + + + R ++ + G R R Sbjct: 226 AIGRAALELERLANHTGDLGALAGDVGFLPTLSYCGRIRGDFLNMTALLCGNRFGRGLVR 285 Query: 361 IGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGT 420 GG A D+ G R+L L+ + + ++ + R +G A++AL+ G Sbjct: 286 PGGTAFDVDTGLLRVLAGRLEAARRAAFGAAELLFASSTVLARFEGTGKLTAEKALDLGL 345 Query: 421 TGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQC 480 G RA G+ D R+ P G D + + D Y R +++ E+ SL L+ Sbjct: 346 VGPPARACGLARDARRTFPQPGAGARDIALSL-HDFGDVYARGLVRRLEMEASLDFLDGL 404 Query: 481 LNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG-I 539 L ++P+GP + P P P + +IE +G I Sbjct: 405 LADLPDGPTRELLPGRLP--------------------------PGRLAVGLIEGWRGEI 438 Query: 540 NSYYLTS-DGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDL 580 +T DG ++Y ++ PSF + + A+RG +SD Sbjct: 439 RHVAVTGPDGRFLAY--KIIDPSFHNWFGLAQALRGQQISDF 478 >UniRef50_UPI0001985C72 PREDICTED: similar to NADH dehydrogenase subunit 7 n=1 Tax=Vitis vinifera RepID=UPI0001985C72 Length = 238 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 82/155 (52%) Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y+ E + AVE+L VP R IRV+ E+ RI++H L ++T DVGA TP Sbjct: 81 YVSTMAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPS 140 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 +A +R+K+ + E ++G RMH ++ R GGVA DLP G R + R+ E+ Sbjct: 141 LWASEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSSTQQFASRIDELEE 200 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRA 427 + N I K R + A++A +WG +G LR Sbjct: 201 MSTGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 235 >UniRef50_Q6APF2 Related to hydrogenase, component E-formate hydrogenlyase subunit 5 n=1 Tax=Desulfotalea psychrophila RepID=Q6APF2_DESPS Length = 509 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 115/490 (23%), Positives = 196/490 (40%), Gaps = 60/490 (12%) Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTKLFPNA-NWYERETWDLFGITFDGHPNLRRIM 155 HL+++ RNRD L V E + T + +ERE + +GIT DGHP L+ + Sbjct: 58 HLLAVVRNRD--LYVIGTEVGKSFQSLTGAVSEKFHMFEREIAEQYGITPDGHPWLKMVR 115 Query: 156 MPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLN 215 + + G KD F K+++ F E E + Sbjct: 116 YHKNYAG---AKDV---------FGNNYGKENIPGNYPFFS---------VEGESIHEVA 154 Query: 216 LGPNHPS--AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +GP H G FR Q GEE++ +GY HRG EKM + + I Sbjct: 155 VGPVHAGIIEPGHFR--FQCAGEEVLHLEIQLGYQHRGIEKMLPTLPQKRFPIICESIAG 212 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + + A+E LAGI+V +IR EL RI +H+ + D P Sbjct: 213 DTSIGHGLSMCQAIEGLAGISVDRGAKIIRTTALELERICNHIGDLGALAGDAAFNPPAA 272 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + R + +L++ ++G R R GGV H + +L+RE L + + + Sbjct: 273 YFGRIRGEFLNLLQVLSGNRFGKGLVRPGGVTHIMREEQRKLIREKLLEVTGEIENICDL 332 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 ++ R + + A + G G RA+GI +DVR + P Y E+P Sbjct: 333 IFSAHTVQARFEHTGTVQHEMAKDLGLVGYSGRASGIAYDVRNSFPTECYR----ELPAN 388 Query: 454 GG---VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 D +R M++VEE+ SL+++ + ++++ + +++ L Sbjct: 389 ENRVTNGDVNSRGMVRVEEIMHSLKLINILIE-------ESENTASEVHMQDQILAPNAF 441 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 +IT L W +G S+ + +D R +++ PSF + + Sbjct: 442 IIT--LNEGW----------------RGEISHCILTDKKGKVQRYKIKDPSFHNWTGLAM 483 Query: 571 AIRGSLVSDL 580 ++R +SD Sbjct: 484 SLRNQEISDF 493 >UniRef50_C6XG24 NADH-quinone oxidoreductase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG24_LIBAP Length = 202 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 93/165 (56%), Gaps = 20/165 (12%) Query: 52 QLLEVGDFLKKLPKP-YVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLK 110 L+ + FL+ P +V + DL G+D R++R F V YH +S NR + +K Sbjct: 38 DLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLSPKYNRRLRVK 90 Query: 111 VALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 +A+AE VP+ ++P A+W+ERE WD++GI F+GHP+LRRI+ ++GHPLRKD+P Sbjct: 91 IAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGFEGHPLRKDFP 149 Query: 171 ARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLN 215 + D +++ + ++P E E+ D+ FL+ Sbjct: 150 VTG-------FVELHYDDKVKKVVYRPVEL----MQEHRDYDFLS 183 >UniRef50_D0L1P0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=2 Tax=Gammaproteobacteria RepID=D0L1P0_HALNC Length = 518 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 105/478 (21%), Positives = 179/478 (37%), Gaps = 46/478 (9%) Query: 120 VPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPF 179 +P+ + P WYERE DL+GITF HP +++ + + P + P T F P Sbjct: 86 LPSLANVLPLLGWYEREIQDLYGITFTDHPEPYPLILHEGFI--PAK---PPLQTGFDP- 139 Query: 180 ELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIV 239 + E + + E + + +D L GP + + V GE I+ Sbjct: 140 ---------KAEPIRGQAEPFA-EANMVGDDIQRLPFGPIRADVVESAQFVFHYIGEGIL 189 Query: 240 DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRV 299 P + Y HR E E + +R+ + + + + A+E G P R Sbjct: 190 HYHPRLFYKHRAMEARFEGVPISAACVLAERVSGVDSVAHVLAFSQAMEAALGWQAPLRA 249 Query: 300 NVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWF 359 RV+L+EL R+ +HL + + +++ + +TG R Sbjct: 250 QAWRVVLAELERLYNHLQFFGHLAKTTTLKVAEAEGIWLEEQVKQINGRLTGSRFLRGVI 309 Query: 360 RIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWG 419 GG+ DL L L+ + ++ Y R + A + G Sbjct: 310 VPGGLRRDLDA---TALIADLNALQPQIEDYLDTLANTRSYLDRLLTTGVLPRQVAFDQG 366 Query: 420 TTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQ 479 TG RA+ +D D+R+ Y+ Y F +P D R ++ +E+RQSL ++ Q Sbjct: 367 ATGPIERASDLDRDLRRDHGYALYPELQFAVPTATE-GDADARARVRDQEIRQSLHLIRQ 425 Query: 480 CLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGI 539 LN + GP PP + + W EA +G Sbjct: 426 ALNKLEPGPICRTESTIDPP-------------MEGMGLGWA------------EAVRGG 460 Query: 540 NSYYLTSDGSTMSY-RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Y + D T R +++ PSF++ + P + S + D + S ++ DR Sbjct: 461 LIYAVHWDAKTERLTRVKIKEPSFSNWRVFPFTVNDSNMMDYAINEASFGLSVAGADR 518 >UniRef50_A0LSU1 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU1_ACIC1 Length = 499 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/396 (22%), Positives = 152/396 (38%), Gaps = 22/396 (5%) Query: 109 LKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMP-QTWKGHPLRK 167 + VA+ P + + P A+WYER+ DLFG+ GHP L +++P + + PL Sbjct: 54 IDVAVPRGSTSYPALSAVVPAASWYERKIHDLFGLEPLGHPRLDPLILPLREAQPRPL-- 111 Query: 168 DYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAF 227 P + + P P+E + + GP + + Sbjct: 112 --PGQRSAIPP----------------LTPDEAAIPSRVLGHGVFTIPHGPVRSGVYESV 153 Query: 228 RIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAV 287 +++ GE+I + HRG E+ E + +R+E + + + + AV Sbjct: 154 EYLVETPGEDIPYVGIRVFAKHRGIERRFEDLDVSDGVLLAERVEGIASVAHALAFCHAV 213 Query: 288 EKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVE 347 E LAG+ R +RV+ +EL RI +HL G V +++I L+ Sbjct: 214 EDLAGVIPSPRDRSVRVIFAELERIANHLDVALKLADAAGLAVAVSRFGYHKERILRLIG 273 Query: 348 AITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGV 407 A G R GG+ + + LL D + + A + +Q R +G Sbjct: 274 AACGSRFGRGVVVPGGIGCEPAISPNALLTRLDDILREVFADADL-LMQTPSFLDRLRGT 332 Query: 408 AAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKV 467 A G G RA+G D D R RPY Y + V G D R+ ++ Sbjct: 333 GPLDPALARRHGALGPIGRASGFDDDDRWHRPYDEYSDLPQFPAVSSGSGDALARLEIRW 392 Query: 468 EELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKER 503 E+R S ++ Q + ++ P P +R Sbjct: 393 SEIRSSAELIRQAVAHIAALSAPTAEPADVPAAIDR 428 >UniRef50_B8J7E4 NADH-ubiquinone oxidoreductase chain 49kDa n=14 Tax=Bacteria RepID=B8J7E4_ANAD2 Length = 521 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 110/477 (23%), Positives = 179/477 (37%), Gaps = 53/477 (11%) Query: 121 PTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE 180 P+ P A +ERE + +G+ +GHP L+ PLR + P RA PF Sbjct: 95 PSIAAELPAAQAFERELAEQWGLRPEGHPWLK-----------PLRFEPPRRAAP-DPFG 142 Query: 181 LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS--AHGAFRIVLQLDGEEI 238 + + E F+ E E+ + +GP H G FR Q GE + Sbjct: 143 RQDPRATIPGEYPFFR---------VEGEEVHEVAVGPVHAGIIEPGHFR--FQCHGERV 191 Query: 239 VDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDR 298 +GY HRG E++ + + I + + Y AVE LAG+ R Sbjct: 192 FHLEIVLGYQHRGVERLLRGGPDRRSMALAESIAGDTAVGHGLAYAKAVESLAGVAPTAR 251 Query: 299 VNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAW 358 +R + EL RI +H+ + DVG + + R + + V I G R + Sbjct: 252 AMSLRGIGLELERIANHVGDLGALAGDVGFLPTASYCGALRAEFLNAVAEICGNRFGRSL 311 Query: 359 FRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEW 418 GGV HDL R L + ++ ++ ++ R +G A Sbjct: 312 VCPGGVKHDLDAEAARALAARVRAAWEKTRRAASLMFESPSVRARFEGTGTVPTALAQAL 371 Query: 419 GTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILE 478 G G RA+G+D DVR+ + Y F D R ++++ E +S+ + Sbjct: 372 GMVGPAARASGVDRDVRRDHAFGIY-RFSHVAVTTAENGDVLARALIRLLEAERSVEFVL 430 Query: 479 QCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG 538 L +P GP + T P GP+ P M+E +G Sbjct: 431 DQLERLPGGPSR-----TAP----------------------GPLAPGALVVSMVEGWRG 463 Query: 539 INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 ++ +D +V+ PSF + + A+R +SD + S + + D Sbjct: 464 EIAHVAVTDAQGRLEAYKVKDPSFHNWFGLAMALRDGQISDFPLCNKSFNLSYAGHD 520 >UniRef50_Q2S5J1 NADH-quinone oxidoreductase n=3 Tax=Rhodothermaceae RepID=Q2S5J1_SALRD Length = 234 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 9/150 (6%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 VI LR FG V+ +++++ ++ EV FLK+ + + DL G+D Sbjct: 48 VIDALREEFGAAVLDVERY-ANEDTIYVEKNRIREVCRFLKEE-EGFDYFVDLGGIDNFT 105 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 R + VFY+L+S +R + + LKV + E D+ VP+ T+++ ANW ERE +D+ Sbjct: 106 AEDR-------YEVFYNLVSTERQKRLRLKVQVDEGDMQVPSVTEVYRAANWNEREAYDM 158 Query: 141 FGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 FG +F HP+ RR+ MP+ + HPLRK++P Sbjct: 159 FGFSFVDHPDPRRMYMPEDFDYHPLRKEFP 188 >UniRef50_B5YL31 NADH-quinone oxidoreductase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL31_THEYD Length = 201 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 9/153 (5%) Query: 24 ELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTH 83 +L+ +F + ++ R V V+ +K ++ E+ +LK + + L DL G+D Sbjct: 41 KLKEQFPEEVIEIKEFRGQVSVI-VKSNKIKEILKYLKN-QQGFNHLQDLCGVDYSPEKP 98 Query: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143 R F + Y+L SI R I ++ + E + + T L+ ANW+ERE +D+FGI Sbjct: 99 R-------FEIVYNLYSIWRRLHIRVRAKVNEETPELDSVTDLWEGANWHERECFDMFGI 151 Query: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYPARATEF 176 F GHP+LRRI+MP+ W G+PLRKDYP + E Sbjct: 152 RFIGHPDLRRILMPEDWNGYPLRKDYPLKGKEL 184 >UniRef50_A8M620 NADH-quinone oxidoreductase subunit C n=14 Tax=Actinomycetales RepID=NUOC_SALAI Length = 245 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 55/85 (64%) Query: 86 GLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITF 145 G A Y L S+ R I L+ A++ D H+P+ T ++P A+W ERE +D+FGI F Sbjct: 138 GADARRLHAVYQLTSMTYRRQIRLEAAVSVEDPHLPSVTGVYPTADWQEREAYDMFGIVF 197 Query: 146 DGHPNLRRIMMPQTWKGHPLRKDYP 170 DGHP L RI+MP W+GHP RKDYP Sbjct: 198 DGHPGLTRILMPDDWEGHPQRKDYP 222 >UniRef50_C0VVL4 NADH dehydrogenase subunit C n=1 Tax=Corynebacterium glucuronolyticum ATCC 51867 RepID=C0VVL4_9CORY Length = 233 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 40/80 (50%), Positives = 52/80 (65%) Query: 90 ADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 A+ YH S N + +V ND H+P+ T ++P N++ERETWD+FGI FDGHP Sbjct: 130 AELHAVYHFYSFTHNHRVRFEVVCPVNDPHIPSLTGIYPGVNFHERETWDMFGIIFDGHP 189 Query: 150 NLRRIMMPQTWKGHPLRKDY 169 +L RI+MP W GHP RKDY Sbjct: 190 SLTRILMPDDWSGHPQRKDY 209 >UniRef50_B0TH79 Proton-translocating NADH-ubiquinone oxidoreductase, chain c n=2 Tax=Heliobacteriaceae RepID=B0TH79_HELMI Length = 149 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 11/136 (8%) Query: 36 VQATRTGVP-VVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFS 93 V+ T GV V + +EQLL V + L++ P + ML DL +D + A F Sbjct: 17 VEVTGEGVSRAVVVPKEQLLAVMEKLRREPDFAFDMLSDLTAVDRK---------DAGFE 67 Query: 94 VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRR 153 V Y L S+ D+ +K A + VP+ T ++P A+W ERE +DL G+TF GHPN+ R Sbjct: 68 VVYQLFSLKHRLDLRVKTRTAAEEAQVPSVTGIWPGADWMEREVFDLMGVTFAGHPNMAR 127 Query: 154 IMMPQTWKGHPLRKDY 169 +++P ++GHPLRKD+ Sbjct: 128 LLLPDEFEGHPLRKDF 143 >UniRef50_Q58433 Uncharacterized protein MJ1027 n=12 Tax=Methanococcales RepID=Y1027_METJA Length = 377 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 94/385 (24%), Positives = 167/385 (43%), Gaps = 28/385 (7%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + +GP HP+ R+ L ++ E I + IG ++RG E + E +++I Sbjct: 10 IAIGPVHPTMLEPHRLRLFIEDEIIKEAELVIGVNYRGIELIMEGLPPEKISILSEKICG 69 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + ++ V E+ I VP+R IR ++ EL R++SH+L + +G T F Sbjct: 70 ICSHIHVWCNVTVTERGCDIEVPERAEYIRAIVEELERLHSHMLLFGHAFEVLGFETMAF 129 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGV--AHDLPRGWDRLLREFLDWMPKRLASYE 391 AF R+ I ++ ITG R + IGG+ ++ L E L+ + L Sbjct: 130 RAFMIREPIMQILGEITGGRAQYSCPIIGGIRPRCNIKESKIPALLERLEKFEENLKKLL 189 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + + + ++ R + V K A + G R +GI D+RK Y+NF+FE Sbjct: 190 ERTVNDPMIMSRIKDVGVLDKKTAKKLHALGPTARGSGIHSDMRKMGQVPVYDNFEFEEI 249 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 V D ++R+ ++ E +S++I+ Q L ++P D + P Sbjct: 250 VFDD-GDVFSRLAVRFYECFESVKIIRQGLKDLP----NLDKRIYNP------------- 291 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 ++ + P+ N EA +G Y D + + ++RTP+ +L + A Sbjct: 292 --NYELKEFKPIDVYN------EAQRGQVYYSYGLDENGRVRQVKIRTPTATNLACMEAI 343 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 + G VSD + + S D + DR Sbjct: 344 LPGHHVSDAELIIASCDPCFTCTDR 368 >UniRef50_D0LPX5 NADH-quinone oxidoreductase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX5_HALO1 Length = 163 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 83/157 (52%), Gaps = 21/157 (13%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFD-------L 73 + L +FG DA ++ G V +KRE+L+EV +L+ P M FD + Sbjct: 5 TLDALTKKFG-DAIEATSSDCGDEVAVVKREKLVEVAQWLRDDP---AMAFDSPVFCTCI 60 Query: 74 HGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWY 133 + E R F V Y L S+ I LKV LAE D PT TKL+P +W Sbjct: 61 DNLGEEPR----------FEVCYQLRSMKLRHRIRLKVRLAEEDPVCPTLTKLWPGFDWQ 110 Query: 134 ERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 ERET+D++GI F H +LRRI M + + G+PLRKDYP Sbjct: 111 ERETYDMYGIEFKDHHDLRRIYMYEEFVGYPLRKDYP 147 >UniRef50_A5G9B7 NADH-quinone oxidoreductase subunit C n=9 Tax=Desulfuromonadales RepID=NUOC_GEOUR Length = 164 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 9/157 (5%) Query: 24 ELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTH 83 +LR +F V+ R V V+ +++E ++ + FLK+ + Y +L D+ +D + Sbjct: 13 KLREKFASSILEVKEFRGEVTVI-VRKEDIVALCKFLKEELR-YNLLTDVTAVDYLGKDP 70 Query: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143 R F V Y++ SI + +K + E + + T ++ ANW ERE +DL GI Sbjct: 71 R-------FMVVYNIYSIPNKDRLRIKAPVTEGECTIDTVCGVWTTANWLEREAYDLMGI 123 Query: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE 180 F HP+LRRIMM W GHPLRKDYP + + P++ Sbjct: 124 IFKNHPDLRRIMMTDDWVGHPLRKDYPLQGPDREPYK 160 >UniRef50_B3CSH0 NADH-quinone oxidoreductase n=2 Tax=Orientia tsutsugamushi RepID=B3CSH0_ORITI Length = 196 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 20/167 (11%) Query: 48 IKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRD 106 I +EQL+EV LK + + +L D+ D R R F + Y+L+SI +N Sbjct: 36 IHKEQLIEVLKLLKNDKELKFTILTDIFAADFPDRNKR-------FEIVYNLLSIIKNIR 88 Query: 107 IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLR 166 +++K+ L +N+L + + T +F NANWYERE +DLFGI F HP+L+RI+ + GHPLR Sbjct: 89 LIVKINLNDNEL-IQSATPVFSNANWYEREIYDLFGIKFANHPHLKRILTDYGFVGHPLR 147 Query: 167 KDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMF 213 KD+ ++ K D ++E + ++P +K E +F F Sbjct: 148 KDFALSG-------YSQVKYDDKLEKVVYEP----VKLDQEYRNFNF 183 >UniRef50_C1F9E1 NADH-quinone oxidoreductase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9E1_ACIC5 Length = 159 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 42/79 (53%), Positives = 56/79 (70%) Query: 92 FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL 151 F V YHL+S + + L V + +D V + T ++P AN+YERE WDLFG+ F GHP+L Sbjct: 76 FQVTYHLLSHRLKQRVRLCVMVDSSDPSVESITSIWPAANYYEREVWDLFGVRFHGHPDL 135 Query: 152 RRIMMPQTWKGHPLRKDYP 170 RRIMMP+ W+GHPL+K YP Sbjct: 136 RRIMMPEEWEGHPLQKTYP 154 >UniRef50_UPI0000D52FC7 NADH Dehydrogenase I Chain C n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52FC7 Length = 163 Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 47/138 (34%), Positives = 83/138 (60%), Gaps = 3/138 (2%) Query: 39 TRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGMDERLRTHREGLPAADFSVFYH 97 T++G+ + +K+E +LE+ +K+ Y L D+ +D L + +++ Y Sbjct: 18 TKSGLLSMLVKKELVLEIIQKIKEDDNSLYDQLIDITVIDNVLSN--QNYSNQRYTIVYS 75 Query: 98 LISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMP 157 +S+ N+ +++ ++E+D + + T++F +ANW+ERE +DLFGI F HPNL+RIM Sbjct: 76 FLSLSFNKRLLVYSNVSEDDQSIDSITQIFESANWFEREIYDLFGIAFKNHPNLQRIMND 135 Query: 158 QTWKGHPLRKDYPARATE 175 ++GHPLRKD+P E Sbjct: 136 YNFQGHPLRKDFPLTGYE 153 >UniRef50_A8IHL3 NADH:ubiquinone oxidoreductase ND9 subunit n=2 Tax=Chlamydomonas reinhardtii RepID=A8IHL3_CHLRE Length = 282 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 9/128 (7%) Query: 44 PVVWIKREQLLEVGDFLKK-LPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISID 102 P ++ E L+ + FL+ + L D+ +D R AA F V YHL+S Sbjct: 122 PTIYTTPESLVPLMVFLRDHTNTQFKCLLDVTAVDFPER-------AARFEVVYHLLSPR 174 Query: 103 RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG 162 N I +KV + E VPT K+F ANW+ERETWD+FG+ F GHP+LRRI+ + G Sbjct: 175 WNNRIRVKVCVDEVT-AVPTLCKVFNTANWFERETWDMFGVFFSGHPDLRRILTDYGFTG 233 Query: 163 HPLRKDYP 170 HPLRKD+P Sbjct: 234 HPLRKDFP 241 >UniRef50_A4GJ20 NADH-quinone oxidoreductase n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ20_9DELT Length = 161 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 12/156 (7%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGM 76 D +I ++ ++ R G V +K++ E FL+ + ++ L D+ + Sbjct: 3 DKKIIERIKEQYASAVIDSHDFR-GDQTVTMKKDCGNEFFQFLRDDSELAFIFLMDITAV 61 Query: 77 DERLRTHREGLPAAD--FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYE 134 D L D F V YH S+ N + +K+ +AE D + T + ANWYE Sbjct: 62 D--------YLSKKDERFEVVYHFYSLKYNHRLRVKIPVAEEDCVAESITPFWKTANWYE 113 Query: 135 RETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 RE WD++GI F HPNLRRI+M + +KGHPLRKDYP Sbjct: 114 REIWDMYGIKFRNHPNLRRILMYEEFKGHPLRKDYP 149 >UniRef50_A0LRI3 NADH-quinone oxidoreductase subunit C n=4 Tax=Frankineae RepID=NUOC_ACIC1 Length = 192 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 7/141 (4%) Query: 31 PDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPA 89 PDA G ++RE L E+ L+ + + +L L G+ RE Sbjct: 35 PDAIERTDVDRGELTFHVRREYLRELALVLRDDERLRFELLNSLSGVHYPTDVGRE---- 90 Query: 90 ADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 V Y L S+ R I L+VA + D H+P+ ++P A++ ERETWD+FG+ FDGHP Sbjct: 91 --LHVVYELTSMTYRRHIRLEVAAPDADPHIPSVVDVWPTADFQERETWDMFGVIFDGHP 148 Query: 150 NLRRIMMPQTWKGHPLRKDYP 170 L RI+MP W GHP RKDYP Sbjct: 149 ALTRILMPDDWPGHPQRKDYP 169 >UniRef50_B4UIA8 NADH (Or F420H2) dehydrogenase, subunit C n=4 Tax=Anaeromyxobacter RepID=B4UIA8_ANASK Length = 175 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 27/178 (15%) Query: 21 VIGELRNRFGPDAFTVQATRTGV---PVVWIKREQLLEVGDFLKKLPK------PYVMLF 71 VI L RF PDA V A GV +++R ++++V FLK+ P PY+ Sbjct: 5 VIAALVERF-PDA--VHAPYEGVGGDDCAFVERSRIVDVCRFLKEDPSLAFNMSPYITAV 61 Query: 72 DLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEN-DLHVPTFTKLFPNA 130 D G R F V Y+L+S N + L+V + E + VP+ T L+ A Sbjct: 62 DYLGASPR------------FEVVYNLLSTVHNTRVRLRVKVPEGPEGVVPSVTGLWRGA 109 Query: 131 NWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDL 188 +W+ER WD++GI F GHP++RR++M ++GHPLRKDYP R + P + + D+ Sbjct: 110 DWFERYCWDMYGIPFSGHPDMRRLLMYDEFEGHPLRKDYPLRGRQ--PLVVEREVHDI 165 >UniRef50_B4UIA3 NADH-quinone oxidoreductase n=4 Tax=Anaeromyxobacter RepID=B4UIA3_ANASK Length = 196 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 79/146 (54%), Gaps = 10/146 (6%) Query: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYV-MLFDLHGMDERLRTH 83 L+ RFG D + + V +K E+++EV FL P + L DL +D R Sbjct: 10 LKARFGDDVGPLSEPKIDAFCV-VKAERIVEVSRFLATEPGLEMDFLEDLTAVDWPKRNV 68 Query: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143 E V YHL+S I+LKV VPT ++ ANW+ERE +DLFG+ Sbjct: 69 IE--------VVYHLLSYRHRHSIVLKVEADRAAPVVPTVEGVWKTANWFEREVYDLFGV 120 Query: 144 TFDGHPNLRRIMMPQTWKGHPLRKDY 169 +F GHP+LRR+M+P W GHPLRKDY Sbjct: 121 SFPGHPDLRRLMLPDDWVGHPLRKDY 146 >UniRef50_UPI0001693946 NADH dehydrogenase subunit C n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693946 Length = 249 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 10/100 (10%) Query: 70 LFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPN 129 L +L G+D++ + + YHL SI R+ M+KV + +P+ T ++P Sbjct: 153 LSNLTGIDQK----------SHLEMVYHLRSIPSGREYMVKVKTDRDRPSIPSVTPIWPT 202 Query: 130 ANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDY 169 ANW ERE +DL G+ F GHP+LRRIMMP W GHPLRKDY Sbjct: 203 ANWNEREVYDLLGVDFPGHPDLRRIMMPDDWVGHPLRKDY 242 >UniRef50_C9RJJ7 NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJJ7_FIBSS Length = 200 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%) Query: 69 MLFDLHGMDERLRTHREGLPAADFSVFYHLISIDR-NRDIMLKVALAENDLHVPTFTKLF 127 ML D+ G+D + EG F+V Y S+ I LKV ++E L VPT + L+ Sbjct: 52 MLVDIAGIDYLTYPNHEG---PRFAVSYAFKSMKNPGARIRLKVLVSEESLKVPTISDLY 108 Query: 128 PNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEF 176 NANWYERE +D FG+ F+GHP+LRR++ + GHPLRKDYPA+ ++ Sbjct: 109 ANANWYEREVYDQFGVIFEGHPDLRRLLNHVEFVGHPLRKDYPAQKRQW 157 >UniRef50_Q2W3I6 NADH-quinone oxidoreductase subunit C n=6 Tax=cellular organisms RepID=NUOC_MAGSA Length = 199 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 9/140 (6%) Query: 32 DAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGMDERLRTHREGLPAA 90 D + R G + +K +++V +LK + L D+ G+D R R Sbjct: 19 DVLGTEVNRCGELSLTVKAASIVKVMTYLKDDAGCLFKQLVDVCGVDWPGREQR------ 72 Query: 91 DFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPN 150 F V YHL+S+ N+ + +KVA E + VP+ T +F +A W+ERE WD++G+ F HP+ Sbjct: 73 -FDVVYHLLSMKHNQRVRVKVATDE-ETAVPSVTGVFSSAGWFEREVWDMYGVLFSDHPD 130 Query: 151 LRRIMMPQTWKGHPLRKDYP 170 LRRI+ ++GHPLRKD+P Sbjct: 131 LRRILTDYGFEGHPLRKDFP 150 >UniRef50_B8J1D5 NADH-quinone oxidoreductase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1D5_DESDA Length = 186 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 9/180 (5%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 + LR F + V+ R + V+ ++ ++LE+ +L+ + L L G+D Sbjct: 6 IADRLRGFFPEEVLDVREFRGQLAVL-VRSGRILELLAYLRDVLD-MRHLQALCGVDNS- 62 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 R + GL + F V YHL SI + I L+ + + + + + L+ ANW ERETWDL Sbjct: 63 RRNEPGL--SPFEVVYHLYSIRQRHGIRLRAMVDDPEEGIDSAVPLWTGANWLERETWDL 120 Query: 141 FGITFDGHPNLRRIMMPQTWKGHPLRKDY----PARATEFSPFELTKAKQDLEMEALTFK 196 GI F GHP+LRRI++P W+GHPLRK+Y PAR E K+ E++AL+++ Sbjct: 121 VGIHFRGHPDLRRILLPDDWQGHPLRKEYPVKIPARGHEEWEGLTALRKRAAELDALSWQ 180 >UniRef50_Q2G5Y5 NADH-quinone oxidoreductase subunit C n=36 Tax=Alphaproteobacteria RepID=NUOC_NOVAD Length = 309 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 8/104 (7%) Query: 67 YVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKL 126 Y L D+ G+D R R F V Y L+S+ +N +++KV+ E VPT T L Sbjct: 60 YQQLMDIAGVDYPQRAER-------FDVCYCLLSVTKNHRVIVKVSTDEA-TPVPTVTTL 111 Query: 127 FPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 +PNA WYERE +D+FG+ F G+P+LRRI+ ++GHP RKD+P Sbjct: 112 WPNAGWYEREVYDMFGVLFAGNPDLRRILTDYGFQGHPFRKDFP 155 >UniRef50_Q0CI54 NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial n=7 Tax=Eukaryota RepID=Q0CI54_ASPTN Length = 688 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 23/200 (11%) Query: 45 VVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDR 103 V+++ ++ V FLK Y + D+ +D R R F V Y+L+S+ Sbjct: 56 VIYVPPTGVIPVMSFLKYHTAAEYTQISDITAVDFPTRDQR-------FEVVYNLLSVRY 108 Query: 104 NRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGH 163 N I +K A+ VP+ T LF A WYERE +D+FG+ F GHP+LRRIM + GH Sbjct: 109 NSRIRVKT-YADEARPVPSVTGLFEGALWYEREVYDMFGVFFSGHPDLRRIMTDYGFDGH 167 Query: 164 PLRKDYPARA-TEF-----------SPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDF 211 PLRKD+P TE P ELT+A ++ E ++P G R E+ + Sbjct: 168 PLRKDFPLTGYTELRYDEEKKRIVIEPLELTQAFRNFEGGTAAWEPVGLGQDRKPES--Y 225 Query: 212 MFLNLGPNHPSAHGAFRIVL 231 M + + PS A RI+ Sbjct: 226 MRKFVCGDSPSPVLARRILF 245 >UniRef50_Q02CU1 NADH-quinone oxidoreductase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CU1_SOLUE Length = 157 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 42/83 (50%), Positives = 56/83 (67%) Query: 92 FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL 151 F + YHL SI+RN+ + LK L D + + T ++ A WYERE +DLFG+ F HP+L Sbjct: 73 FEIVYHLHSIERNQRVRLKALLPGADPVIESVTGVWRGAGWYEREVFDLFGVRFLNHPDL 132 Query: 152 RRIMMPQTWKGHPLRKDYPARAT 174 RRI+MP W+G+PLRKDYP T Sbjct: 133 RRILMPDDWEGYPLRKDYPVTGT 155 >UniRef50_Q1D8S6 NADH dehydrogenase I, C subunit n=2 Tax=Cystobacterineae RepID=Q1D8S6_MYXXD Length = 156 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 77/134 (57%), Gaps = 5/134 (3%) Query: 40 RTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTH-REGLPAADFSVFYHL 98 RTG I + L +V FLK P+ LF +D R H E P F V Y L Sbjct: 3 RTGGAWAVIHADSLPKVAAFLKNDPELEFKLFG--SIDAVDRLHLAENDPR--FEVVYFL 58 Query: 99 ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQ 158 S+ R+ + LKV ++E + VPT LF ANW+ER T+D +GI FDGHP+LRRI++ Sbjct: 59 YSLKRHEHVRLKVRVSEANPVVPTLVPLFRGANWWERLTFDFYGIRFDGHPDLRRILLYD 118 Query: 159 TWKGHPLRKDYPAR 172 ++GHPLRKDY R Sbjct: 119 EFEGHPLRKDYALR 132 >UniRef50_D1CCD3 NADH-quinone oxidoreductase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCD3_THET1 Length = 179 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 11/153 (7%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDE 78 P+I L+ P A G + + ++L+++ L+ P + L D+ +D Sbjct: 21 PIINTLQEII-PGAIEEVTVFRGETTIVVPVDRLIDIARTLRDNPAMQFNYLVDVTAVDW 79 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 RT R F V YHL SI N I +KV + ++ HVP+ T L+ ANW ERET+ Sbjct: 80 LGRTPR-------FDVVYHLYSIPLNHAIRMKVRV-DDGQHVPSLTGLWELANWGERETY 131 Query: 139 DLFGITFDGHPNLRRIMMPQTWK-GHPLRKDYP 170 D+FGI F+GHP+LRRI++P+ W+ G PLRKD+P Sbjct: 132 DMFGIVFEGHPDLRRILLPEDWQDGFPLRKDFP 164 >UniRef50_Q6KZ65 NADH-quinone oxidoreductase chain C n=4 Tax=Thermoplasmatales RepID=Q6KZ65_PICTO Length = 151 Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 15/135 (11%) Query: 42 GVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISI 101 G + IK+E L+E F+++ + L + G+D ++++ E V YH+ + Sbjct: 13 GRKIYKIKKEDLIE---FMEQKKRDGYYLSAITGVD--MKSYIE--------VVYHIYNY 59 Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 D+N + +KV D HVP+ T L+ A+W ERE +DL GI FDGH NLRRI++P W Sbjct: 60 DKNEYLEIKVD--TEDSHVPSLTGLWKAADWDEREQYDLMGIIFDGHENLRRILLPDEWV 117 Query: 162 GHPLRKDYPARATEF 176 GHPLRKDY + ++ Sbjct: 118 GHPLRKDYDLKKVQY 132 >UniRef50_UPI0001C31274 NADH (or F420H2) dehydrogenase, subunit C n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31274 Length = 169 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 7/106 (6%) Query: 65 KPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFT 124 K Y L LHG+D R SV Y L+ +D I +KV + +D HVP+ Sbjct: 51 KGYRFLASLHGVDYYPEEPR-------LSVHYQLLDMDTVDRIAVKVRMPLDDAHVPSVV 103 Query: 125 KLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 L+P AN ERE +D+FG+ FDGHP++RRI+MP+ ++GHP R+D+P Sbjct: 104 DLWPGANHPEREVFDMFGVVFDGHPDMRRILMPEDYEGHPQRRDFP 149 >UniRef50_B3QUS1 NADH-quinone oxidoreductase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUS1_CHLT3 Length = 177 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 8/123 (6%) Query: 48 IKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDI 107 +K+E + E+ FLK+ + + D+ G D R + E F V Y+L++++ N I Sbjct: 31 VKKENIREISQFLKE-ELGFNLCVDICGAD---RFNEE----PRFEVIYNLMNLEHNTRI 82 Query: 108 MLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRK 167 LKV L E H+P+ ++P A+WYERET+D+FGI F HP++RRI MP+ ++ P+RK Sbjct: 83 RLKVWLEEAKPHLPSVISVWPAADWYERETYDMFGIVFVNHPDMRRIYMPEDFEYFPMRK 142 Query: 168 DYP 170 ++P Sbjct: 143 EFP 145 >UniRef50_D1RAG7 NADH-quinone oxidoreductase n=2 Tax=Parachlamydiaceae RepID=D1RAG7_9CHLA Length = 173 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 12/149 (8%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLR 81 I L+N P+A Q G + +++E L++V +LK Y +L DL G+D Sbjct: 7 IENLKNH-CPEAILAQKQFLGETTLEVQKENLIKVLSYLKH---DYEVLMDLTGVD---- 58 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 + ++ + + +N + + + E + +P+ T L+ A WYERE +DLF Sbjct: 59 ----YVDPTPYTKVVYWLHNPKNFERIRVIVFVEREEPIPSVTCLWDGAAWYERELFDLF 114 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 G+ +GHP+L+RI+MP WKGHPLR+DYP Sbjct: 115 GVPIEGHPDLKRILMPDDWKGHPLRRDYP 143 >UniRef50_A9GUY8 NADH-quinone oxidoreductase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GUY8_SORC5 Length = 217 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 102/219 (46%), Gaps = 37/219 (16%) Query: 4 LTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKL 63 LTAQ P + E ++FG D + P VW R+ L FL+ Sbjct: 9 LTAQFPG----------AVLETHSQFGDDTAVLD------PAVW--RDAAL----FLRND 46 Query: 64 PKPYVMLF-DLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAE---NDLH 119 P+ + +F DL +D R F V HL S++RN I +K + + N Sbjct: 47 PRTLMNMFVDLTAVDYLWRGD-----VPRFEVVCHLRSLERNHRIRIKARVGDEEGNGAE 101 Query: 120 VPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPA-RATEFSP 178 + + ++ ANW+ERE +DL GI F GHP+LRRI+M ++GHPLRKDYPA R P Sbjct: 102 IDSIVPVWKGANWFERECYDLLGIVFKGHPDLRRILMYPEFEGHPLRKDYPANRIQPLIP 161 Query: 179 FELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLG 217 F L F P+E GM G ++ DF G Sbjct: 162 FRDVPNTGKLP----PFGPDE-GMSFGRQSHDFALRGPG 195 >UniRef50_A4ITI5 NADH-quinone oxidoreductase chain C n=73 Tax=Bacillaceae RepID=A4ITI5_GEOTN Length = 514 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 14/149 (9%) Query: 25 LRNRFGPDAFT---VQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERL 80 + GPD + VP + + +E +V +FLK + + L +LHG D Sbjct: 369 IEEHLGPDVLEDAYINRLAKDVPTLVVNKEAYYKVAEFLKYNEQLRFDYLSELHGTD--F 426 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 +TH E V+ HL S + + + LKV + ++ + + L+P ANW E E +DL Sbjct: 427 QTHME--------VYVHLYSYPKRQPVALKVKIDRDNPEIDSLVPLWPGANWPECEAYDL 478 Query: 141 FGITFDGHPNLRRIMMPQTWKGHPLRKDY 169 GI F GHPNL RI + + W GHPLRKDY Sbjct: 479 LGIRFRGHPNLIRIFLGEQWVGHPLRKDY 507 >UniRef50_A9MAI1 NADH-quinone oxidoreductase subunit C n=86 Tax=cellular organisms RepID=NUOC_BRUC2 Length = 202 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 19/191 (9%) Query: 23 GELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKK-LPKPYVMLFDLHGMDERLR 81 G +R R G DA G + + L+ V FL+ + +V L D+ G+D R Sbjct: 11 GYIRERLG-DAIEEANLAYGELTLCVPVASLIGVLTFLRDDVQCQFVNLTDISGVDYPQR 69 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 R F V Y L+S +N+ I +KV A+ D VP+ +F A WYERE +D++ Sbjct: 70 EKR-------FDVVYQLLSPRQNQRIRVKVQ-ADEDTLVPSAVPVFFGAEWYEREAYDMY 121 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWG 201 GI F GHP+LRRI+ ++GHPLRKD+P + + + E++ + ++P + Sbjct: 122 GILFSGHPDLRRILTDYGFEGHPLRKDFPLTG-------FVEVRYNDELKRVVYEPVQ-- 172 Query: 202 MKRGTENEDFM 212 +++ N DF+ Sbjct: 173 LRQEFRNFDFL 183 >UniRef50_A9W1N1 NADH-quinone oxidoreductase subunit C n=9 Tax=Alphaproteobacteria RepID=NUOC_METEP Length = 219 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 10/143 (6%) Query: 29 FGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLF-DLHGMDERLRTHREGL 87 GP A T A G + ++ ++ +L+ P F D+ G+D R R Sbjct: 35 LGP-AVTEWAITRGELTLVVQGSDIVYALTYLRDEPACAFRCFIDICGVDYPQRARR--- 90 Query: 88 PAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDG 147 F V YHL+S+ N + +KV + VP+ +FP ANWYERET+DL+GI F G Sbjct: 91 ----FDVVYHLLSLRHNMRVRVKVQ-TDAATPVPSAIPVFPAANWYERETYDLYGILFSG 145 Query: 148 HPNLRRIMMPQTWKGHPLRKDYP 170 HP+LRR++ ++GHPLRKD+P Sbjct: 146 HPDLRRLLTDYGFEGHPLRKDFP 168 >UniRef50_A8LIT7 NADH-quinone oxidoreductase subunit C n=51 Tax=Alphaproteobacteria RepID=NUOC_DINSH Length = 215 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 15/131 (11%) Query: 67 YVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKL 126 + L D+ +D R R F V YH +S+ +N I ++V + E+D+ VP+ Sbjct: 63 FSTLIDITAVDYPERAQR-------FDVVYHFLSMYQNHRIRIRVPVREDDI-VPSIISE 114 Query: 127 FPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQ 186 P+ANW+ERE +D+FGI F GHP+LRRI+ ++G+PLRKD+P T+ + Sbjct: 115 HPSANWFEREVFDMFGILFSGHPDLRRILTDYGFRGYPLRKDFPTTG-------YTEVRY 167 Query: 187 DLEMEALTFKP 197 D E + + ++P Sbjct: 168 DEEKKRVVYEP 178 >UniRef50_C0Z771 NADH-quinone oxidoreductase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z771_BREBN Length = 424 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 11/128 (8%) Query: 43 VPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISI 101 VP + I+ E+ +V FL+ + + L DLHG+D R V+YH S Sbjct: 300 VPTLTIQNERWHQVAQFLRDDEQLSFEYLSDLHGVDYEDR----------LEVYYHFYSY 349 Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 + + +KV + + V + L+ ANW ERET+DL GI F GH +LRRI++P W Sbjct: 350 KNRQSLAVKVKTSREESKVASVMDLWHGANWNERETFDLLGIHFPGHKDLRRILLPDDWV 409 Query: 162 GHPLRKDY 169 G+PLRKDY Sbjct: 410 GYPLRKDY 417 >UniRef50_B3ET79 NADH-quinone oxidoreductase n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ET79_AMOA5 Length = 166 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 15/168 (8%) Query: 21 VIGELRNRFGPDAFTVQATRTGVP-VVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDER 79 ++ L+ + P A ++ P + + + ++ L++ P M FD Sbjct: 6 IVKLLQEKLKP-AVNIETDMGATPQAIIVPAAHIAQICQILQENPS---MYFDYLACITA 61 Query: 80 LRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDL-----HVPTFTKLFPNANWYE 134 L G A V Y+L SI N +M+KV++ N +PT + L+ ANW+E Sbjct: 62 LDN---GFEAGTLEVIYNLYSISYNFQLMIKVSVTRNKPGEPLPSIPTVSHLWQAANWHE 118 Query: 135 RETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDY--PARATEFSPFE 180 RE ++L GI F GHP+LRRI++P W+GHPLR DY PA S +E Sbjct: 119 REAYELVGIHFTGHPDLRRILLPVDWEGHPLRTDYVEPASYHGISTYE 166 >UniRef50_D2LH96 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LH96_RHOVA Length = 504 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 93/401 (23%), Positives = 146/401 (36%), Gaps = 42/401 (10%) Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 D + V+L+ P+ P A ER DL+G DG P+ RR + W Sbjct: 71 DAQENCRAIVSLSLKAGAYPSVGLHHPPALRLERAMRDLYGAIPDGIPDERRWLDHGVWP 130 Query: 162 GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHP 221 G Y F P E Q + +GP H Sbjct: 131 GREHEPGY-----HFLPVEGNGLHQ---------------------------IPVGPVHA 158 Query: 222 S--AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 G FR +GE + +GY H+G E + + S R+ Sbjct: 159 GIIEPGHFR--FTANGETVARLEARLGYVHKGVEALAQGASIEKAAKLAARMSGDSTVAY 216 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDR 339 + AVE G +P R ++R +++EL R++ H+ + D + R Sbjct: 217 SFAFSRAVEAALGWEIPPRAQILRGVMAELERLSHHVSDVGGICNDAAVAVLLARCSLIR 276 Query: 340 QKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTI 399 + I A+ G RM GGVA D+ + L+ + +A Q+ Sbjct: 277 EDILRTQAALFGHRMMMDAIVPGGVARDIDAAGATAILALLERIEIGFHRVVRAYDQSPS 336 Query: 400 LKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDC 459 ++ R+ G ++ G RA G FD R + PY Y F++P SD Sbjct: 337 IQNRTHGTGIVQLDFIRQFAAGGFVGRAGGRAFDARASFPYPPYNAVAFKVPTRE-ESDV 395 Query: 460 YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPP 500 R+ +++EE+ +S I+ Q L + +GP A PPP Sbjct: 396 DARIWIRIEEIAESAGIIRQLLAKLEDGPIHA-----APPP 431 >UniRef50_P23710 NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial n=65 Tax=Eukaryota RepID=NDUS3_NEUCR Length = 283 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 21/177 (11%) Query: 45 VVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDR 103 ++I ++ V FLK Y + D+ +D + R F V Y+L+S+ Sbjct: 99 TIYISPAGVIPVFSFLKYNTAAEYTQVSDITAVDFPTKDQR-------FEVVYNLLSVRH 151 Query: 104 NRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGH 163 N I +K A+ VP+ T L+ ANWYERE +DLFG+ F GHP+LRRIM + GH Sbjct: 152 NSRIRVKT-YADEVSPVPSITPLYDGANWYEREVYDLFGVFFTGHPDLRRIMTDYGFDGH 210 Query: 164 PLRKDYPARA-TEF-----------SPFELTKAKQDLEMEALTFKPEEWGMKRGTEN 208 PLRKD+P TE P E+T+A ++ E + ++ G+ R E+ Sbjct: 211 PLRKDFPMTGYTEIRYDEEKKRIVTEPLEMTQAFRNFEGGSSAWEQVGAGIDRKPES 267 >UniRef50_D2R5G8 NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5G8_9PLAN Length = 166 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/79 (49%), Positives = 54/79 (68%) Query: 92 FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL 151 F + Y L + I ++V L E +L +P+ L+ ANW ERE +D+FGI F+GHP+L Sbjct: 70 FGLVYLLANTVTAERITVRVYLNEPELTIPSMVPLYAGANWLEREAFDMFGIVFEGHPDL 129 Query: 152 RRIMMPQTWKGHPLRKDYP 170 RRIMMP+ ++ HPLRKDYP Sbjct: 130 RRIMMPEEFEAHPLRKDYP 148 >UniRef50_Q5WT22 NADH-quinone oxidoreductase subunit C n=4 Tax=Legionella pneumophila RepID=NUOC_LEGPL Length = 227 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 57/79 (72%) Query: 92 FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL 151 F+V YHL+S +N + +K+ + E+ L VP+ L+ +ANW+ERE +DL+GI FDGHP+L Sbjct: 101 FAVVYHLLSTKKNHRLRVKLFVEESHLIVPSVHHLWKSANWFEREAYDLYGILFDGHPDL 160 Query: 152 RRIMMPQTWKGHPLRKDYP 170 RR++ + GHP RKD+P Sbjct: 161 RRLLTDYGFIGHPFRKDFP 179 >UniRef50_B3PY58 NADH-quinone oxidoreductase subunit C 2 n=9 Tax=Rhizobiaceae RepID=NUOC2_RHIE6 Length = 187 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 12/158 (7%) Query: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 83 + RFG D T G+ V + E+++E FLK+ P + L D+ G+D T Sbjct: 12 IMERFG-DTIEDLGTAHGIDVFAVPPERIVEFCRFLKEHPAMQFNFLSDICGVDHYPETP 70 Query: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143 R F YHL S+ + +K L + VP+ T ++ ANW+ERE WD++GI Sbjct: 71 R-------FEAVYHLYSLPNRWRVRIKCRLGDPP-EVPSVTGVWRTANWHEREAWDMYGI 122 Query: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYPARA--TEFSPF 179 F GHP+LRRI M + ++G P RKD+P R + +PF Sbjct: 123 RFAGHPDLRRIYMWEGFEGFPQRKDFPLRGYKDKLNPF 160 >UniRef50_Q28T74 NADH-quinone oxidoreductase subunit C n=7 Tax=Alphaproteobacteria RepID=NUOC_JANSC Length = 207 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 16/174 (9%) Query: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMDERLRTH 83 L + D + G V + Q++ +FLK + L D+ +D R Sbjct: 12 LSEKRSDDVVSTDVNAMGELSVTVAPAQMVGFIEFLKTDRTCRFSTLIDITAVDYPSRDR 71 Query: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143 R F V YH +S+ +N + ++ A+ E D +P+ + + P A WYERE +D+FGI Sbjct: 72 R-------FDVVYHFLSMYQNHRVRVRAAIREEDT-LPSISGVHPGAGWYEREIYDMFGI 123 Query: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKP 197 F GH +LRR++ ++GHPLRKD+P T+ + D E++ + ++P Sbjct: 124 LFTGHADLRRLLTDYGFRGHPLRKDFPTTG-------YTEVRYDEELKRVVYEP 170 >UniRef50_Q04YA6 NADH dehydrogenase (Ubiquinone), C chain n=6 Tax=Leptospira RepID=Q04YA6_LEPBL Length = 177 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 11/149 (7%) Query: 25 LRNRFGPDAFTVQA-TRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRT 82 L+ +F P VQ + VPV ++K E ++ V + LK P Y L DL +D Sbjct: 9 LKEKF-PHFLDVQEPVISNVPVFYLKAEGIVPVLNALKGHPTLNYNFLNDLTAVDWL--- 64 Query: 83 HREGLPAADFSVFYHLISIDRNRD-IMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 G F V Y L S +++ I +KV L + + +P+ T ++ ANW ERE +DLF Sbjct: 65 ---GKKEPRFEVNYLLRSANQSSSKIRIKVRLEDGEA-IPSVTNVYKGANWPEREIYDLF 120 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 GI+F GHPNL RI+MP ++GHPLRKD+P Sbjct: 121 GISFIGHPNLDRILMPDNFQGHPLRKDFP 149 >UniRef50_A9VS96 NADH (Or F420H2) dehydrogenase, subunit C n=15 Tax=cellular organisms RepID=A9VS96_BACWK Length = 485 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 4/87 (4%) Query: 87 LPAADF----SVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFG 142 L A DF V+ HL S + + + +KV L V + T L+ A+W ERET+DL G Sbjct: 392 LHATDFVTHMEVYVHLFSYGKKQSVAVKVKLDREAPQVKSVTPLWKGADWPERETYDLLG 451 Query: 143 ITFDGHPNLRRIMMPQTWKGHPLRKDY 169 I F+GHPNL RI+MP W G+PLRKDY Sbjct: 452 IVFEGHPNLSRILMPDDWVGYPLRKDY 478 >UniRef50_B2UPT7 NADH-quinone oxidoreductase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UPT7_AKKM8 Length = 194 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 11/161 (6%) Query: 26 RNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHRE 85 +NRFG D T + G + + R+ + +V +L+ + ML +L +D + R Sbjct: 16 QNRFGKDIITDRYEFRGDITLTVARQAVADVVRWLRD-SAGFDMLVNLSSVDNMGESPR- 73 Query: 86 GLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITF 145 F V Y L + ++ LK + + + VP+ T++F +ANW+ERE WDL GI F Sbjct: 74 ------FEVNYTLTQSETGANLSLKTKVDDGE-EVPSVTEIFQSANWHEREAWDLMGIKF 126 Query: 146 DGHPNLRRIMMPQTWKGHPLRKDYPARA--TEFSPFELTKA 184 GHP+LRRI+M + + PLRKD+P + TE T+A Sbjct: 127 SGHPDLRRILMWEGYPYFPLRKDFPVQGVPTELPGVAFTEA 167 >UniRef50_C0QBF7 HyfG n=3 Tax=Bacteria RepID=C0QBF7_DESAH Length = 503 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 106/486 (21%), Positives = 172/486 (35%), Gaps = 60/486 (12%) Query: 98 LISIDRNRDI-MLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 LI + N D ++V A+ D + T P +ERE ++ + + GHP L+ + Sbjct: 59 LICVLANDDAGSVEVVAADTDPAFQSLTPDCPQVQAFEREIYEQWNVLPQGHPWLKSV-- 116 Query: 157 PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNL 216 + HP P K F + E+ + + Sbjct: 117 ----RSHP-------------PVVAAHGKAAHAGTTDFFS---------IDGEEAHEVAV 150 Query: 217 GPNHPS--AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYL 274 GP H G FR Q GE + +GY HRG E + + Y + + Sbjct: 151 GPVHAGIIEPGHFR--FQCHGETVYHLEISLGYQHRGVEPALKDGPDKRTLHYFETLAGD 208 Query: 275 GGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFF 334 + +E LAGI VP R IR + +EL RI +H+ + DVG + + + Sbjct: 209 TSIGHGTAGCCMIEALAGIDVPPRGQAIRAIAAELERIANHIGDLGAISGDVGFLPTMSY 268 Query: 335 AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAA 394 R +L I G R GG A D+ L LD + S + Sbjct: 269 CGRIRGDALNLTAMICGNRFGRGLVIPGGTAWDITHAQTGELLRRLDEIHADAHSAIELM 328 Query: 395 LQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGG 454 L + R + + A E G G RA+G+ DVR + PY Y + + Sbjct: 329 LNTPSVLARLENTGQVPTQTAREIGLVGLAARASGLKQDVRTSHPYENYRLTPLPV-ITR 387 Query: 455 GVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITH 514 DC R ++ E++ S + + L ++P G PP K T+ Sbjct: 388 KTGDCLARAQIRWGEIQASFKFIRTLLADLPGGEVANLWEGKLPPQKMATI--------- 438 Query: 515 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRG 574 ++E +G + +D + ++ PSF + + A+R Sbjct: 439 -----------------LVEGWRGEICHTAATDSAGKFSFYKIVDPSFHNWFGVSLALRN 481 Query: 575 SLVSDL 580 +SD Sbjct: 482 QQISDF 487 >UniRef50_B3DXN6 NADH-quinone oxidoreductase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXN6_METI4 Length = 213 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 48/131 (36%), Positives = 78/131 (59%), Gaps = 10/131 (7%) Query: 55 EVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALA 114 +V +LK+ K + +L D+ G+D R F V YH ++ + + +K ++ Sbjct: 41 QVARYLKE-EKGFGLLLDISGVDHWGEEPR-------FEVVYHFYNLQKATLLRVKGRVS 92 Query: 115 ENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP--AR 172 E + VPT + ++P ANW+ERE +D+FGI F+GHP+LRRI+M + + +PLRKD+P + Sbjct: 93 EANPIVPTLSFIYPTANWHEREAYDMFGIIFEGHPDLRRILMWEGYPYYPLRKDFPVEGK 152 Query: 173 ATEFSPFELTK 183 T+ SP K Sbjct: 153 ETDQSPVAFAK 163 >UniRef50_A5UWP3 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 Tax=Roseiflexus RepID=A5UWP3_ROSS1 Length = 358 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 146/349 (41%), Gaps = 33/349 (9%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 L LGP HP+ G R +L + + +VD G++ RG + R + RI Sbjct: 5 LALGPFHPAWLGPQRFILHIADDRVVDVEYQNGFNERGCAERLPRLPLPDALHLVARI-- 62 Query: 274 LGGC--VNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 G C + + + A+E++ V R ++RV ++EL R +HL + +G Sbjct: 63 CGECSFAHSLAFCQAIEQVQRRKVGARAALLRVAIAELERTAAHLYTARAVLDAIGMEQR 122 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 Q+ D++ +TG R+ P GG+ DL + + L M L + Sbjct: 123 GAILDHFCQQSRDMLALVTGGRIPPPVCAPGGLLRDLTPVERQEVLAMLPGMSADLYRFI 182 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + L R+ V A ++G G RA+GI DVR +PY+ Y D + P Sbjct: 183 DRLIDQRFLLMRTVEVGVLPRAAAEQFGVRGPLARASGIRRDVRVDQPYAAYSMLDVQ-P 241 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 + D Y R++L + E + ++++E L +PE + P+ P + Sbjct: 242 IIQEGGDVYARLLLLLLEAYEGVKLVESALQRLPE-----EDPIVELPHE---------- 286 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP 560 +P ++ ++E +G Y L SDG ++ R ++ TP Sbjct: 287 ------------LPRGQASSVVEGPRGAIRYTLESDGVRLT-RVQIDTP 322 >UniRef50_A9B5Q0 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5Q0_HERA2 Length = 368 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/296 (25%), Positives = 123/296 (41%), Gaps = 23/296 (7%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 L LGP HP R+VL+++GE+I D GY +RG + R + + I Sbjct: 15 LPLGPFHPDWQTPMRMVLRVEGEQIADVEFRDGYTNRGISERLTRTTIPQGLHLVSHICA 74 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + + + LA+E+L I +R +R++ E+ R HL + + +G Sbjct: 75 ADSHAHSLGFCLALEQLLKINASERAAALRLLACEVERATVHLSTMKEVLTILGLQRDAE 134 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP-----------RGWDRLLREFLDW 382 ++++++ + G P + GGV DL R +RL+ F+D Sbjct: 135 HVQKLHHGLFEVMQHLCGTSSPPNYIVPGGVRQDLSSTEQESMALQFRRLERLMYRFVDR 194 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 +L+ R GV + A ++G G RA GI FD R R Y Sbjct: 195 FID----------HRGVLR-RCVGVGVLSREAAEQFGVRGPMARAAGIGFDARIDRAYGA 243 Query: 443 YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 Y F V D Y R+++ E +SL++ + L N+P G + + P + P Sbjct: 244 YAQFPPS-RVTQERGDVYARLVIFSLEAFESLKLAIRVLANLPSGDWAGNAPDSVP 298 >UniRef50_B0C6C5 NAD(P)H-quinone oxidoreductase subunit J n=1 Tax=Acaryochloris marina MBIC11017 RepID=NDHJ_ACAM1 Length = 182 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 19/159 (11%) Query: 20 PVI--GELRNRFGPDAFTVQA---TRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLH 74 P+I G + FTV+A GV ++ + +QL++V L Y+M Sbjct: 22 PIIEAGPVAKHLTQAGFTVEALGADHLGVEMIKVTADQLVDVATTLVNDGYNYLMC---- 77 Query: 75 GMDERLRTHREGLPAADFSVFYHLISI----DRNRDIMLKVALAENDLHVPTFTKLFPNA 130 + + P + YHL+ + DR ++ +KV L+ D VP+ ++ + Sbjct: 78 ------QGGYDSGPGQELVSMYHLLKLSDDADRPPEVRIKVFLSREDPRVPSLYWVWKAS 131 Query: 131 NWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDY 169 +W ERE++D++GI ++GHPNL RI+MP+ W G PLRKDY Sbjct: 132 DWQERESYDMYGIVYEGHPNLTRILMPEDWVGWPLRKDY 170 >UniRef50_C6W0T5 NADH-quinone oxidoreductase n=2 Tax=Flexibacteraceae RepID=C6W0T5_DYAFD Length = 180 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 11/147 (7%) Query: 31 PDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAA 90 P+ V TR P + + + + FL + + Y FD + G A Sbjct: 15 PEYTIVPDTRNPQPALMVPAAGIAAICSFLHEDERLY---FDFLAC---ITAIDNGAAAD 68 Query: 91 DFSVFYHLISIDRNRDIMLKVALAENDL-----HVPTFTKLFPNANWYERETWDLFGITF 145 + Y+L SI D+ LK N +PT + ++ A+W+ERE +DL GI F Sbjct: 69 SMELIYNLTSIPYGIDLTLKTVFPRNTEGVALPSIPTVSHIWRTADWHEREAYDLIGIRF 128 Query: 146 DGHPNLRRIMMPQTWKGHPLRKDYPAR 172 +GHP+LRRI++P+ W+GHPLRKDY A+ Sbjct: 129 EGHPDLRRILLPEDWEGHPLRKDYDAQ 155 >UniRef50_C7LSU9 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LSU9_DESBD Length = 493 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 116/521 (22%), Positives = 195/521 (37%), Gaps = 87/521 (16%) Query: 86 GLPAADFSVFYHLISIDRNRDIMLKVALAEN-DLHVPTFTKLFPNANWYERETWDLFGIT 144 G+P D ++ ++++D + +L VA +E P+ T P A+ +ERE W+ G+ Sbjct: 48 GVPDHDGTILVAVLALDS--ESILGVARSEPISGSYPSLTPKHPQAHLFEREVWEQHGLV 105 Query: 145 FDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKR 204 GHP L+ P+R + A +PF F+ Sbjct: 106 PVGHPWLK-----------PVRHTF-ENAPANAPF---------------FR-------- 130 Query: 205 GTENEDFMFLNLGPNHPSA--HGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWH 262 E + + +GP H G FR Q GEE++ +GY HRG E + Sbjct: 131 -VEGGEVHEVAVGPVHAGVIEPGHFR--FQCAGEEVLHLEIALGYQHRGIEDALQNGP-- 185 Query: 263 SYIPYTDRIEYLGG---CVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYI 319 + ++IE + G + + +E L G+ P R +R M EL R+ +H + Sbjct: 186 -HPATMNQIETVAGDTTIAHATAHASVLEALGGVETPLRAQWLRAMALELERLANHTGDM 244 Query: 320 STFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREF 379 DV + R +L + G R R GG HDL + L+ Sbjct: 245 GALAMDVAFLPTSAACGKIRGDFLNLTALLCGNRFGRGLIRPGGCRHDLE---EERLKTL 301 Query: 380 LDWMPKRLASYEKAAL---QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 + + +A E+A ++ R + V +A + G G RA G+ DVR Sbjct: 302 TERLKAHMADVEQAMAWFWDAASVRVRFRNVGVVHPSQATDIGLVGPAARACGLVRDVRF 361 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 P +G+ F D + R ++ E+++S R L L P D Sbjct: 362 DHP-AGWHRFSHSPVAVWPSGDIFARARVRSLEIQRSGRYLFDQL----AAPVDGDITAA 416 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD--GSTMSYR 554 P P+ +L + ++E +G + +D G SY Sbjct: 417 LPAPQPESL-----------------------AVALVEGWRGEVCHVALTDYFGRFRSY- 452 Query: 555 TRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 ++ PSF + + ++RG+ VSD + S + D Sbjct: 453 -KITDPSFHNWTGLALSLRGTAVSDFPICNKSFNLSYCGFD 492 >UniRef50_Q67KN8 NADH-quinone oxidoreductase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KN8_SYMTH Length = 156 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 1/69 (1%) Query: 105 RDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK-GH 163 R+I +KV L H+P+ L+P ANW+ERET+D++GI FDGHPN RRI++P W+ GH Sbjct: 74 RNIHIKVDLPRQGAHIPSIANLYPGANWHERETYDMYGIRFDGHPNHRRILLPDNWQGGH 133 Query: 164 PLRKDYPAR 172 PL KD+ R Sbjct: 134 PLLKDFADR 142 >UniRef50_Q2RU38 NADH-quinone oxidoreductase subunit C n=18 Tax=Alphaproteobacteria RepID=NUOC_RHORT Length = 213 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 66/104 (63%), Gaps = 8/104 (7%) Query: 67 YVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKL 126 + L D+ G+D R R F V Y+++S+ N+ I +K++ +E D VP+ T++ Sbjct: 61 FSQLVDIAGVDYPSREER-------FEVVYNMLSMHHNQRIRVKISASE-DTPVPSVTRV 112 Query: 127 FPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 F +ANW+ERE WD++GI F HP+LRR++ ++GH RKD+P Sbjct: 113 FSSANWFEREAWDMYGIFFSEHPDLRRLLSDYGFEGHAQRKDFP 156 >UniRef50_C6NX38 Ni,Fe-hydrogenase III large subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX38_9GAMM Length = 527 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/396 (23%), Positives = 155/396 (39%), Gaps = 27/396 (6%) Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 H + + + + L N P+ + +FP A ER DL G+ G+P++R + Sbjct: 73 HAFFLTESGYLWCTLPLPANLREFPSLSSVFPTACRQERAIRDLLGLEPLGNPDMRPWLR 132 Query: 157 PQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL 214 W HPL A D+ + L+ E R +D + Sbjct: 133 HAAWPANIHPL------------------AMSDIPEDILSCAGEIDYSYRAPAGQDLHEI 174 Query: 215 NLGPNHPSA--HGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 +GP H G FR GE+IV +GY H+G E++ Q + + R+ Sbjct: 175 PVGPVHAGTIEPGHFRFTCL--GEQIVQLEERLGYCHKGIERLFVGQPPDAALRLAGRVS 232 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y +AVE +A I + R +R + E R+ +HL + D G + Sbjct: 233 GDSSVAYAWSYAMAVESVAEIELSQRALALRGLCLERERLANHLGDLGALGNDAGLAFAL 292 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP-RGWDRLLREFLDWMPKRLASYE 391 ++++ I G R ++GGVA DL R + + W +RL + + Sbjct: 293 TQLLAIKEELLRENAEIFGHRYLMDVVQLGGVAVDLDGRALQHIEQSSKAWR-RRLETLD 351 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 ++ L+ R A+ A WG G RA+G +D+R Y+ + EI Sbjct: 352 LLLQEHAGLRDRLVATGPITAERAAYWGMAGLSGRASGQAWDLRTHFAPPPYDRYPMEIS 411 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEG 487 + D R ++ E+ + LR E + N+P G Sbjct: 412 L-ARRGDVAARWAVRFAEVFRCLRWQENVVANLPGG 446 >UniRef50_A1HPT3 NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT3_9FIRM Length = 155 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 52/80 (65%) Query: 90 ADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 A F V YHL S+ +K +A++D VP+ L+P AN+ ERE +DL G+ F GHP Sbjct: 67 AYFEVVYHLYSLPLGHRATVKTRVAKDDPQVPSIADLWPTANFQEREVYDLLGVVFTGHP 126 Query: 150 NLRRIMMPQTWKGHPLRKDY 169 L RI++P+ + GHPLRKDY Sbjct: 127 GLTRILLPEGFDGHPLRKDY 146 >UniRef50_Q9G8U3 NADH dehydrogenase subunit 9 n=1 Tax=Rhodomonas salina RepID=Q9G8U3_RHDSA Length = 188 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 51/127 (40%), Positives = 72/127 (56%), Gaps = 9/127 (7%) Query: 45 VVWIKREQLLEVGDFLKKLP-KPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDR 103 VV I + +L E+ FLK + ML D++ +D R +R F + Y L S+ Sbjct: 32 VVKIVKSKLKEILSFLKNNEFCCFKMLLDIYAIDFLQRANR-------FVLNYLLRSLKY 84 Query: 104 NRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGH 163 N + L+ +L EN V + T L+ N NW ERE WD+ GI FD HP+LRRI+ ++G Sbjct: 85 NYFLTLQFSLNENS-SVDSITYLYKNGNWVEREVWDMNGIFFDNHPDLRRILTDYGFEGF 143 Query: 164 PLRKDYP 170 PLRKD+P Sbjct: 144 PLRKDFP 150 >UniRef50_C1ZK67 NADH-quinone oxidoreductase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZK67_PLALI Length = 179 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 10/88 (11%) Query: 92 FSVFYHLISIDRNRDIMLKVALAE---NDL-------HVPTFTKLFPNANWYERETWDLF 141 F V YHL+S+ R + + LKV L ++L +P+ L+ ANW+ERE +D+F Sbjct: 80 FEVVYHLLSLSRRQTLTLKVILPRPGGDELSKDAELPEIPSIADLWLAANWHEREAFDMF 139 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDY 169 GI F GHP+LRRI+ P+ W+G+PLRKDY Sbjct: 140 GIRFKGHPDLRRILCPEDWEGYPLRKDY 167 >UniRef50_Q01UP0 NADH-quinone oxidoreductase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01UP0_SOLUE Length = 168 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 12/153 (7%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMD 77 D + EL+ RFG + + +T G + + + ++ + ++LK L + L D+ +D Sbjct: 7 DSDLARELKERFG-EGISETSTYLGQNFLVARPDSVIPILEYLK-LEADFDYLVDVTAVD 64 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVP-TFTKLFPNANWYERE 136 R R F + Y L S RN + +K +A D + P T + ANW ERE Sbjct: 65 WPKRAER-------FDLVYILYSFSRNERVRVKAFIA--DGYKPETAVGVHLTANWLERE 115 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDY 169 +D+FGI F GHP++RRI+MP+ W+G+PLRKDY Sbjct: 116 VFDMFGIEFAGHPDMRRILMPEEWQGYPLRKDY 148 >UniRef50_B3E6C1 NADH-ubiquinone oxidoreductase chain 49kDa n=2 Tax=Deltaproteobacteria RepID=B3E6C1_GEOLS Length = 506 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 108/516 (20%), Positives = 186/516 (36%), Gaps = 62/516 (12%) Query: 86 GLPAADFSVFYHLIS--IDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143 G PA Y L++ D IM + N P+ P +ERE + GI Sbjct: 46 GFPADGAITLYCLLASPADGVLGIMQTIC---NGTEFPSIAVQCPQLQLFEREIAEQCGI 102 Query: 144 TFDGHPNLRRI-MMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGM 202 F GHP + + + +GH D RA + Q +++ + + Sbjct: 103 RFVGHPWFKPVRFVHSAVRGH----DAWGRADD----------QPIQVGVMEYYR----- 143 Query: 203 KRGTENEDFMFLNLGPNHPSA--HGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 E E+ + +GP H G FR Q GE++ +GY HRG E++ Sbjct: 144 ---VEGEEIHEVAVGPVHAGVIEPGHFR--FQCHGEQVFHLEISLGYQHRGIEQLLLNGP 198 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 320 + + I + + Y + +E L+ P + +R + EL R+ +H + Sbjct: 199 HPQTLRQMEAIAGDTSIGHGLAYCMVLESLSKSHPPATAHALRGIALELERLANHTGDLG 258 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 DVG + F R ++ I G R + GG L + L+ L Sbjct: 259 AIAGDVGYLPTASFCGRIRGDFLNMSAFICGSRFGRGLLKPGGTVFGLDQAQREELQNRL 318 Query: 381 DWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPY 440 L S + + R +G A+ A+E G G RA G+ DVR P+ Sbjct: 319 ATGRAELTSAIELLWNTPSVMSRLEGTGVVSAESAVEMGLVGPAARACGLKRDVRSDYPF 378 Query: 441 SGYENFDFEIPVGGG-VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 Y ++P+ D +R ++ EE ++SL + L +P+G A+ Sbjct: 379 GIYRM--AQVPIATAHHGDVCSRSSVRWEECQKSLDFCVEQLRQLPKGAHAAE------- 429 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 P+ + + E +G + +D + + ++ Sbjct: 430 --------------------LKPLQGDQLTVALTEGWRGEICHLAITDSAGRFRQYKITD 469 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 PSF + Q + A+R +SD + S + D Sbjct: 470 PSFHNWQGLAMALRNEQISDFPLCNKSFNLSYCGFD 505 >UniRef50_Q1CRZ9 NADH-quinone oxidoreductase n=15 Tax=Helicobacter RepID=Q1CRZ9_HELPH Length = 266 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 17/182 (9%) Query: 41 TGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLI- 99 T V W+K++ + V L+ L Y L ++ +D + F +FY + Sbjct: 58 TNTAVFWVKKDDIFSVATTLRHLG--YECLSEMSAIDLCAKK-------GHFELFYQFVG 108 Query: 100 ---SIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 S R + +K L N+ V + + L+ +ANW ERE +DL GI FD HP L+R++M Sbjct: 109 FSDSCKNRRRVRVKCILLPNE-SVDSLSFLYRSANWSEREAYDLLGIVFDKHPYLKRLIM 167 Query: 157 PQTWKGHPLRKDYPARATEFSP-FELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLN 215 P W GHPL + YP + EF+ +E+ K E + E+ R E + F F Sbjct: 168 PHDWVGHPLLRSYPLKGDEFAQWYEVDKIFGKEYREVVG--KEQRDSARVDEKDTFNFAK 225 Query: 216 LG 217 +G Sbjct: 226 IG 227 >UniRef50_Q21TB4 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TB4_RHOFD Length = 498 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 112/489 (22%), Positives = 178/489 (36%), Gaps = 67/489 (13%) Query: 112 ALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPA 171 A A+ H T P A +ERE W+ G+ D HP L+ Sbjct: 71 ATAQRGEHYRCLTAQHPAAQIFERELWEQTGLFPDDHPWLK------------------- 111 Query: 172 RATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSA--HGAFRI 229 P +Q +E FK RG E + + +GP H S G FR Sbjct: 112 ------PVRFEGERQQRMLEYPFFK------VRGQEVHE---VGVGPIHASVIEPGHFRF 156 Query: 230 VLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEK 289 + GE + +GY HRG E + R+ P + I Y A+E Sbjct: 157 MCL--GENVHHLEIQLGYQHRGVEGLLLRRPVWQLTPLVESICGDSAVAYAWGYGAALEL 214 Query: 290 LAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAI 349 ++ V + R + E+ RI HL + D+ + R I + + + Sbjct: 215 MSNQPVAPAIQASRAIALEMERIAMHLATLGGMATDIAFLQGGATYGRLRTAIINASQRV 274 Query: 350 TGFRMHPAWFRIGG---VAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQG 406 G R W R G ++ L + R LR F + L ++ R G Sbjct: 275 CGNRFGRGWIRPGQAKPLSEALQQDLTRTLRAF----APDFTQINQLMLAARSVQARLHG 330 Query: 407 VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLK 466 + AL+ G TG RA+G+ D R P + Y + + V DC+ R+ L+ Sbjct: 331 TGTVSQQAALDLGLTGPVARASGVALDHRTQWPGAAYGHAPLPM-VTEPDGDCWARMRLR 389 Query: 467 VEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPA 526 + E+ SL L Q L + +A ++ P + E L ++ + GPV+ Sbjct: 390 MREVDASLAWLLQLLGDTTLNLSQAGQAQSSTPAALQA----EALCVSLVEGTRGPVLQV 445 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 E+ + KG +Y +V+ PS A+ + A+R + +SD + S Sbjct: 446 LET-----SAKGELRHY------------KVQDPSTANWFGLAFAMRDNAISDFPICNKS 488 Query: 587 IDFVMSDVD 595 D D Sbjct: 489 FDLSYCGND 497 >UniRef50_A5FW46 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW46_ACICJ Length = 476 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 85/380 (22%), Positives = 151/380 (39%), Gaps = 54/380 (14%) Query: 120 VPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPF 179 VP+ ++P WYERET D GI F G P P P RA E + Sbjct: 64 VPSIATIWPLLGWYERETADHRGIAFSGQPE-------------PFSLIAPLRADEEADL 110 Query: 180 ELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIV 239 ++ L F P G+ E+ +F F +G E I+ Sbjct: 111 RRLPGLSGDAVQVLPFGPVRAGV---VESAEFSFFYVG------------------EAIL 149 Query: 240 DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRV 299 VP + HRG E Q+ + + +R+ +G + + Y A+E A + VP R Sbjct: 150 HYVPHLFLKHRGMEDRFVDQTPETGLVLAERVSGVGSVAHALAYAQAMEAAAQVAVPGRA 209 Query: 300 NVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWF 359 RV+++EL R+ +HL Y+ +++ + +TG R Sbjct: 210 RYQRVIVAELERLYNHLHYLGHLADTTTLKVAHAEGALLAERVKQIGARVTGSRFLRGVI 269 Query: 360 RIGGVAHD-----LPRGWDRL---LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYG 411 GG+ + L D L +R ++ + + +++ A + + Sbjct: 270 APGGLRRELRVEGLAGALDALRAPIRRYIARLDASESHFDRLATTGVLPR---------- 319 Query: 412 AKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGV-SDCYTRVMLKVEEL 470 + A + G TG RA+G+D D+R+ Y+ Y++ D + V G D + R +++ E+ Sbjct: 320 -EVAFDQGATGPVARASGLDRDLRRDHAYAAYDDPDLALAVATGTDGDAHARARVRIAEI 378 Query: 471 RQSLRILEQCLNNMPEGPFK 490 +L ++ + + P G + Sbjct: 379 ENALLMIVRAIALTPGGAIR 398 >UniRef50_Q7VFS4 Donor-ubiquinone reductase I n=2 Tax=Helicobacter RepID=Q7VFS4_HELHP Length = 247 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 5/116 (4%) Query: 67 YVMLFDLHGMDERLRTHREGL----PAADFSVFYHLISIDRNRDIMLKVALA-ENDLHVP 121 + ++ +LH + + T + +F +FY L+ ++ LK+ + + Sbjct: 66 FALIKELHSLGYEILTEMSAIDKLEECNEFELFYLLLKLEDTSSKRLKIKTKIKKGQQIS 125 Query: 122 TFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 177 + T LF +ANW ERE +D+FGI F+GHP L+R++MP+ W GHPL K YP + E++ Sbjct: 126 SLTPLFKSANWSERECYDMFGIIFNGHPYLQRLIMPKDWVGHPLLKSYPLQGDEYA 181 >UniRef50_A9KBK6 NADH-quinone oxidoreductase subunit C n=7 Tax=Coxiellaceae RepID=NUOC_COXBN Length = 227 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 37/79 (46%), Positives = 55/79 (69%) Query: 92 FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL 151 F+V YHL+S+ N I LK + + VP+ K++ +A+WYERE +DL+GI F+GHP+L Sbjct: 102 FAVVYHLLSLRHNHRIRLKTYVEGDPPLVPSVIKIWSSADWYEREAFDLYGIVFEGHPDL 161 Query: 152 RRIMMPQTWKGHPLRKDYP 170 RR++ + GHP RKD+P Sbjct: 162 RRLLTDYGFVGHPFRKDFP 180 >UniRef50_B2WTG3 NADH dehydrogenase subunit 9 n=2 Tax=unclassified Blastocystis RepID=B2WTG3_9STRA Length = 196 Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 9/116 (7%) Query: 56 VGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALA 114 V +FLKK Y + D+ +D +T+R F V Y L+S+ N + +K L Sbjct: 50 VLNFLKKYTNGQYKTMSDMCAIDYPYKTYR-------FEVIYTLLSLVFNSRVKIKTYLT 102 Query: 115 ENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 E D + + T +F ANW+ERE +D FGI F+ + +LRRI+ +KGHPLRKD+P Sbjct: 103 ELD-SIESITSIFSGANWWEREIYDFFGIYFNNNKDLRRILTDYGFKGHPLRKDFP 157 >UniRef50_Q30PI0 NADH-quinone oxidoreductase n=9 Tax=Epsilonproteobacteria RepID=Q30PI0_SULDN Length = 268 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 65/95 (68%), Gaps = 2/95 (2%) Query: 90 ADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 +F VFY ++S+++ + + +K+ + + + + + KLF +A+W ERE +D+FGI +GHP Sbjct: 98 GEFEVFYQMLSMNKRKRLRIKMFIKKGEA-INSVEKLFRSADWSEREMFDMFGIEANGHP 156 Query: 150 NLRRIMMPQTWKGHPLRKDYPARATEFSP-FELTK 183 ++RI+MP W+GHPL K YP + EF+ +E+ K Sbjct: 157 FMKRILMPYDWQGHPLLKTYPLQGDEFAAWYEVDK 191 >UniRef50_P34944 NADH-ubiquinone oxidoreductase 27 kDa subunit n=97 Tax=Embryophyta RepID=NDUS3_MARPO Length = 195 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 8/104 (7%) Query: 67 YVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKL 126 + +L D+ G+D R R F V Y+L+SID N I + ++ E + + + Sbjct: 52 FKVLIDICGVDYPSRKRR-------FEVVYNLLSIDYNTRIRILTSVDE-ITPICSVVSI 103 Query: 127 FPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 FP+A W+ERETWD+FG+ F HP+LRRI+ ++GHPLRKD+P Sbjct: 104 FPSAGWWERETWDMFGVYFSNHPDLRRILTDYGFEGHPLRKDFP 147 >UniRef50_C3XE99 NADH-quinone oxidoreductase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XE99_9HELI Length = 268 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 21/200 (10%) Query: 45 VVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAAD--FSVFYHLISID 102 V ++ +E + + LK + Y ++ ++ +D A+D F +FY L S + Sbjct: 61 VFYVPKEDVCRALEILKSMK--YNIMSEMSAIDNL---------ASDGTFELFYQLTSHE 109 Query: 103 RN----RDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQ 158 ++ R + +K AL EN+ +P+ + +F ANW ERE +D+FGI F HP L+RI+MP Sbjct: 110 KSHKDRRRLRVKCALKENEA-MPSVSGIFACANWSERECYDMFGIKFLNHPFLKRILMPI 168 Query: 159 TWKGHPLRKDYPARATEFSP-FELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLG 217 W G+PL K YP + EF+ +E+ K + + PE+ R N+ F +G Sbjct: 169 DWVGNPLLKTYPLKGDEFASWYEVDKIFGREYRDVVG--PEQRDSARIDRNDSINFSRIG 226 Query: 218 PNHPSAHGAFRIVLQLDGEE 237 P +V ++ +E Sbjct: 227 KEVPKGATPSDVVHEISYQE 246 >UniRef50_A1KEQ8 Possible formate hydrogenase hycQ (FHL) n=14 Tax=Actinomycetales RepID=A1KEQ8_MYCBP Length = 492 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 113/490 (23%), Positives = 185/490 (37%), Gaps = 60/490 (12%) Query: 94 VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRR 153 V Y ++ +R + L+ + ++ + + L A +ERE DL+GI GHP RR Sbjct: 44 VVYLFLAGYPDRRVELEYVVPADNPEIRSLAYLSFPAGRFEREMADLYGIRPVGHPKPRR 103 Query: 154 IMMPQTWKG-HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFM 212 ++ W HP+R D A EF+ + A F E Sbjct: 104 LVRHAHWPDWHPMRTD-AGPAPEFT-----------DTGAFPFL--------AVEGPGVY 143 Query: 213 FLNLGPNHPS--AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDR 270 + +GP H G FR + GE IV + + HRG EK+ + + + +R Sbjct: 144 EIPVGPVHAGLIEPGHFR--FSVAGETIVRLKARLWFVHRGIEKLFHGRPATAAVDLAER 201 Query: 271 IEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 I + + + LA+E GI +P ++ +R ++ EL R+ +H + DVG Sbjct: 202 ISGDTSAAHALAHSLAIEDALGIELPHEIHRLRALIVELERLYNHAADLGALANDVGYSL 261 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 A R+ + A+TG R+ R GGVA D L +D LA Sbjct: 262 ANAHAQRIRENLLRRNAAVTGHRLLRGAIRAGGVALRALPDTDELAALAVD-----LAEV 316 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 L N+++ R G A +A G G RA+G+ D R P + Sbjct: 317 ATLTLANSVVYDRFAGTAVLHPDDASALGCLGYVARASGLRSDARVEHPTIVLPITEIGA 376 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 P G D R ++ +E S + + + + T P TL Sbjct: 377 PDG----DVLARYTVRRDEFAASAALAQHIVESH-----------TGPIEYAATLH---- 417 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 PV + ++E +G + + D R +V PS+ + +P Sbjct: 418 -----------PVGAPSSGIGIVEGWRGTIVHRVEIDVDGRITRAKVVDPSWFNWPALPV 466 Query: 571 AIRGSLVSDL 580 A+ ++V D Sbjct: 467 AMADTIVPDF 476 >UniRef50_Q56219 NADH-quinone oxidoreductase subunit 5 n=5 Tax=Thermaceae RepID=NQO5_THET8 Length = 207 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/88 (46%), Positives = 59/88 (67%), Gaps = 5/88 (5%) Query: 92 FSVFYHLISIDRNRD-----IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFD 146 F+V Y L+S+ +D ++V + E D +PT T L+ +AN+ ERE +DLFGI F+ Sbjct: 68 FAVVYELVSLPGWKDGDGSRFFVRVYVPEEDPRLPTVTDLWGSANFLEREVYDLFGIVFE 127 Query: 147 GHPNLRRIMMPQTWKGHPLRKDYPARAT 174 GHP+LR+I+ P+ +GHPLRKDYP T Sbjct: 128 GHPDLRKILTPEDLEGHPLRKDYPLGET 155 >UniRef50_A6FCN4 NADH-quinone oxidoreductase n=1 Tax=Moritella sp. PE36 RepID=A6FCN4_9GAMM Length = 180 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 11/148 (7%) Query: 35 TVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFS 93 ++ +P V + + L+E+ FL+ + + D+ G+D T R + Sbjct: 21 SIDPNVIDMPCVVVSPKDLVELCLFLRDDDAFKFNFMADIGGIDFHPNTPR-------YQ 73 Query: 94 VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRR 153 + YHL SI + +K L ++ PT T L+ ANW+ERE +D+FGI F+GHP+LRR Sbjct: 74 LVYHLYSISLGWRLRIKCPL-KDPPKAPTITHLWTTANWHEREAYDMFGIVFEGHPDLRR 132 Query: 154 IMMPQTWKGHPLRKDYPARA--TEFSPF 179 I M Q ++G P+RKD+P R +++PF Sbjct: 133 IYMWQEFEGWPMRKDFPLRGYKDKYNPF 160 >UniRef50_C7M2T9 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2T9_ACIFD Length = 146 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 7/126 (5%) Query: 48 IKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRD- 106 + RE LE + L+ +VML DL +D L RE LP + ++++ R D Sbjct: 8 VAREDWLETAEGLRA--DGFVMLADLTCVD-YLEGVREDLPEEVVRERFEVVAVLRRMDP 64 Query: 107 ---IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGH 163 + L+ + ++D + + ++P +ERE +DLFGI F GHP+L RI+MP+ W+GH Sbjct: 65 PAMVRLRAQVPDDDPVIDSLWSVYPGVEAFEREVFDLFGIHFRGHPDLSRILMPEDWEGH 124 Query: 164 PLRKDY 169 PLRKDY Sbjct: 125 PLRKDY 130 >UniRef50_Q5GT42 NADH-quinone oxidoreductase subunit C n=19 Tax=Rickettsiales RepID=NUOC_WOLTR Length = 190 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 15/131 (11%) Query: 67 YVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKL 126 + +L D+ G+D R R F + Y+L+SI N + +K+ L E+D+ P+ ++ Sbjct: 48 FELLVDIFGVDYPDREKR-------FELIYNLLSIVHNIRVHIKLQLYEDDMP-PSVVRI 99 Query: 127 FPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQ 186 F A+W+ERE +D++GI F HP+LRRI+ +KGHP+ KD+P E + + Sbjct: 100 FNTASWFEREVFDMYGIEFSNHPDLRRILTDYGFKGHPMLKDFPLTGYE-------EVRY 152 Query: 187 DLEMEALTFKP 197 D+E + + + P Sbjct: 153 DIEAKKVVYNP 163 >UniRef50_Q11XR7 NADH-quinone oxidoreductase n=4 Tax=Sphingobacteriales RepID=Q11XR7_CYTH3 Length = 168 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 13/151 (8%) Query: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYV-MLFDLHGMDERLRTH 83 + RFG A T + P + +++ L ++ FL+ + + L L G+D Sbjct: 12 IAERFGEAAITGEQAALAQPQLLVQKAFLKDICFFLRDDERFFFDQLSCLTGLDN----- 66 Query: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAEND-----LHVPTFTKLFPNANWYERETW 138 G V YHL SI + +++KV D +P+ +++ A+W+ERE + Sbjct: 67 --GPVKNTVEVIYHLYSIPFHLFLVIKVEAERGDGKDILPEIPSVEQVWRTADWHEREAF 124 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDY 169 DL+GI F GHP+LRRI++P W+G+PLRKDY Sbjct: 125 DLYGIRFSGHPDLRRILLPADWEGYPLRKDY 155 >UniRef50_A9G9T0 NADH-quinone oxidoreductase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G9T0_SORC5 Length = 182 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 52/80 (65%) Query: 94 VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRR 153 V YH+ S + ++LKV L V T ++ ANW ERE +DL G+ F+GHP+LRR Sbjct: 75 VVYHIYSYAKKHRVVLKVFLDRESPAVSTLVDVWSAANWQERECFDLLGVRFEGHPDLRR 134 Query: 154 IMMPQTWKGHPLRKDYPARA 173 +++P W+GHPLRKD+ +A Sbjct: 135 LLLPDDWEGHPLRKDWQEKA 154 >UniRef50_Q31HF8 NADH-quinone oxidoreductase subunit C n=4 Tax=Proteobacteria RepID=NUOC_THICR Length = 223 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 1/80 (1%) Query: 92 FSVFYHLISIDRNRDIMLKVALAENDL-HVPTFTKLFPNANWYERETWDLFGITFDGHPN 150 F+V YHL+S++ NR + +KV + + V + ++ A+W+ERE +DLFGI F+GHP+ Sbjct: 103 FAVVYHLLSVENNRRVRVKVYPEDTQMPMVDSVVSVWNCADWFEREAFDLFGILFNGHPD 162 Query: 151 LRRIMMPQTWKGHPLRKDYP 170 LRRI+ + GHPLRKD+P Sbjct: 163 LRRILTDYGFVGHPLRKDFP 182 >UniRef50_Q3BRN1 NADH-quinone oxidoreductase subunit C n=30 Tax=Gammaproteobacteria RepID=NUOC_XANC5 Length = 250 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 5/87 (5%) Query: 87 LPAADFSVFYHLISIDRNRDIMLKVALAENDLHVP---TFTKLFPNANWYERETWDLFGI 143 LP F+V LIS N+ L+V D VP + T ++P NW+ERE +DLFGI Sbjct: 112 LPKQRFAVVAQLISYQHNQ--RLRVRCYAPDEQVPVVASLTDIWPGVNWFEREAFDLFGI 169 Query: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYP 170 FDGHP+LRRI+ + GHP RKD+P Sbjct: 170 VFDGHPDLRRILTDYGFVGHPFRKDFP 196 >UniRef50_Q1RJI7 NADH-quinone oxidoreductase subunit C n=15 Tax=Rickettsia RepID=NUOC_RICBR Length = 196 Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 19/143 (13%) Query: 59 FLKKLPKP----YVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALA 114 FLK L + + +L DL G D + R F V Y+L+S+ N+ +++K ++ Sbjct: 39 FLKALKESEELRFTVLTDLFGSDFPEKAKR-------FEVVYNLLSLKLNKRLIIKTYVS 91 Query: 115 ENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARAT 174 E++ +P+ +F WYERE +D+FGI FDG+ + RRI+ ++GHPLRKD+P Sbjct: 92 EHE-SIPSAMSIFNATCWYEREVYDMFGINFDGNDDKRRILTDYEFEGHPLRKDFPLTG- 149 Query: 175 EFSPFELTKAKQDLEMEALTFKP 197 T+ K D + + + ++P Sbjct: 150 ------YTQVKYDEQTKKVAYEP 166 >UniRef50_Q95748 NADH-ubiquinone oxidoreductase 27 kDa subunit n=23 Tax=Eukaryota RepID=NDUS3_ARATH Length = 190 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 23/154 (14%) Query: 32 DAFTVQATRTGVPVVWIKREQLLEVGD--------------FLKKLPKPYV-MLFDLHGM 76 + F + + +P W+K+ + E G+ FLK V +L D+ G+ Sbjct: 3 NQFIFKYSWETLPKKWVKKMERSEHGNRFDTNTDYLFQLLCFLKLHTYTRVQVLIDICGV 62 Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D R R F V Y+L+S N I ++ + A+ + + LFP+A W+ERE Sbjct: 63 DYPSRKRR-------FEVVYNLLSTRYNSRIRVQTS-ADEVTRISSVVSLFPSAGWWERE 114 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 WD+FG++F HP+LRRI+ ++GHPLRKD+P Sbjct: 115 VWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFP 148 >UniRef50_Q1V2T1 NADH-quinone oxidoreductase n=4 Tax=Bacteria RepID=Q1V2T1_PELUB Length = 202 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 57/82 (69%), Gaps = 1/82 (1%) Query: 89 AADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGH 148 A F V Y +S + N+ I+L ++EN++ +P+ T ++P ANW ERE +D++G+ F H Sbjct: 68 AQRFKVVYLFLSHEFNQRIILSYLISENEV-IPSLTPIYPAANWMEREVFDMYGVKFKDH 126 Query: 149 PNLRRIMMPQTWKGHPLRKDYP 170 P++RRI+ ++GHPLRKD+P Sbjct: 127 PDMRRILTDYGFEGHPLRKDFP 148 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D2U4G0 NADH-quinone oxidoreductase chain C/D n=1 Tax=Ar... 766 0.0 UniRef50_Q2YAA3 NADH-quinone oxidoreductase subunit C/D n=259 Ta... 711 0.0 UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 ... 680 0.0 UniRef50_D2MJM9 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 663 0.0 UniRef50_Q2C5T4 NADH dehydrogenase I, B/C/D subunits n=2 Tax=Pho... 610 e-173 UniRef50_Q6MIR5 NADH-quinone oxidoreductase subunit C/D n=1 Tax=... 605 e-171 UniRef50_C6NSM4 NADH dehydrogenase I, B/C/D subunits n=1 Tax=Aci... 576 e-163 UniRef50_B2V8J2 NADH-quinone oxidoreductase subunit C/D n=15 Tax... 574 e-162 UniRef50_B6YTW8 Hydrogenase 4, component G or formate hydrogen l... 560 e-158 UniRef50_B6YWP8 Hydrogenase 4, subunit 5 n=1 Tax=Thermococcus on... 556 e-157 UniRef50_A0RMD1 NADH-quinone oxidoreductase subunit C/D n=5 Tax=... 555 e-156 UniRef50_B7R5K6 Hydrogenase-4 component G n=1 Tax=Thermococcus s... 543 e-153 UniRef50_Q5LH50 NADH-quinone oxidoreductase subunit C/D n=34 Tax... 542 e-152 UniRef50_A1RWL3 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 541 e-152 UniRef50_C9LCY9 NADH dehydrogenase I, C/D subunit n=9 Tax=Bacter... 540 e-152 UniRef50_B5YKR2 Hydrogenase-4 component G n=1 Tax=Thermodesulfov... 537 e-151 UniRef50_Q1PZL4 Similar to membrane-bound [NiFe]-hydrogenase-3, ... 535 e-150 UniRef50_C5A3D4 Formate hydrogenlyase I subunit F (Mhy1F) n=2 Ta... 526 e-147 UniRef50_Q0W2B9 Hydrogenase, large subunit-like protein (HycE-li... 518 e-145 UniRef50_Q2RXM4 NADH-ubiquinone oxidoreductase n=1 Tax=Rhodospir... 515 e-144 UniRef50_B0R3U3 NADH dehydrogenase-like complex subunit CD n=16 ... 511 e-143 UniRef50_O75306 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 507 e-142 UniRef50_Q2K3U2 NADH-quinone oxidoreductase subunit D 2 n=7 Tax=... 505 e-141 UniRef50_A1RZ40 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 504 e-141 UniRef50_P16431 Formate hydrogenlyase subunit 5 n=104 Tax=Bacter... 502 e-140 UniRef50_A3DNE9 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 500 e-140 UniRef50_A9B4Z7 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=... 500 e-140 UniRef50_B1ZRT0 NADH-quinone oxidoreductase subunit D 1 n=16 Tax... 499 e-139 UniRef50_Q4P4N9 Putative uncharacterized protein n=1 Tax=Ustilag... 498 e-139 UniRef50_Q2S5J0 NADH-quinone oxidoreductase subunit D n=5 Tax=Ba... 497 e-139 UniRef50_A1ASR5 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 495 e-138 UniRef50_D1C6X3 NADH dehydrogenase I, D subunit n=1 Tax=Sphaerob... 494 e-138 UniRef50_C1XJB2 NADH dehydrogenase subunit D n=1 Tax=Meiothermus... 493 e-138 UniRef50_B9L172 NADH dehydrogenase I, D subunit n=1 Tax=Thermomi... 491 e-137 UniRef50_B1ZSF2 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 491 e-137 UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=A... 490 e-137 UniRef50_B5YKI5 NADH-quinone oxidoreductase subunit D 1 n=12 Tax... 489 e-136 UniRef50_B5YL34 NADH-quinone oxidoreductase subunit D 2 n=1 Tax=... 486 e-135 UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 ... 483 e-135 UniRef50_Q6MDR3 NADH-quinone oxidoreductase subunit D n=2 Tax=Pa... 482 e-134 UniRef50_C8W240 Hydrogenase, large subunit-like protein n=1 Tax=... 482 e-134 UniRef50_C1D0H4 Putative NADH dehydrogenase (Quinone), subunit D... 482 e-134 UniRef50_Q1QP34 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=... 481 e-134 UniRef50_B1W516 NADH-quinone oxidoreductase subunit D 1 n=24 Tax... 480 e-134 UniRef50_Q24ST8 Formate hydrogenlyase subunit 5 n=2 Tax=Desulfit... 480 e-134 UniRef50_Q1IS59 NADH-quinone oxidoreductase subunit D 1 n=2 Tax=... 480 e-134 UniRef50_B4SJH6 NADH-quinone oxidoreductase subunit D 1 n=211 Ta... 480 e-134 UniRef50_P77329 Hydrogenase-4 component G n=130 Tax=Bacteria Rep... 475 e-132 UniRef50_Q2JFL7 NADH-quinone oxidoreductase subunit D n=81 Tax=B... 473 e-132 UniRef50_D2R5G7 NADH dehydrogenase (Quinone) n=2 Tax=Planctomyce... 472 e-131 UniRef50_C9LVK3 Proton-translocating NADH-quinone oxidoreductase... 470 e-131 UniRef50_Q7NI12 NAD(P)H-quinone oxidoreductase subunit H 1 n=3 T... 469 e-130 UniRef50_UPI0001C31275 NADH dehydrogenase I, D subunit n=1 Tax=C... 468 e-130 UniRef50_C0Z770 NADH-quinone oxidoreductase chain D n=2 Tax=Baci... 467 e-130 UniRef50_A8VSQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 465 e-129 UniRef50_Q979M3 NADH dehydrogenase I chain D n=6 Tax=Thermoplasm... 464 e-129 UniRef50_Q2RJU4 NADH-quinone oxidoreductase subunit D n=94 Tax=F... 462 e-128 UniRef50_A5UXK3 NADH-quinone oxidoreductase subunit D 1 n=20 Tax... 461 e-128 UniRef50_Q0W6T4 [NiFe]-hydrogenase, large subunit (EchE-like) n=... 461 e-128 UniRef50_Q30PI1 NADH-quinone oxidoreductase subunit D n=45 Tax=E... 460 e-127 UniRef50_Q67P19 NADH-quinone oxidoreductase subunit D 1 n=1 Tax=... 458 e-127 UniRef50_B8I2P5 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 458 e-127 UniRef50_P56753 NAD(P)H-quinone oxidoreductase subunit H, chloro... 457 e-127 UniRef50_A8A9X2 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 454 e-126 UniRef50_C6X0Z4 NADH-ubiquinone oxidoreductase chain D n=1 Tax=F... 454 e-126 UniRef50_UPI00016C492D NADH dehydrogenase subunit D n=1 Tax=Gemm... 453 e-126 UniRef50_A5FKI7 NADH-quinone oxidoreductase subunit D n=17 Tax=B... 453 e-126 UniRef50_D1Z1Z0 Putative [NiFe]-hydrogenase large subunit n=1 Ta... 451 e-125 UniRef50_A7H9V5 NADH-quinone oxidoreductase subunit D 2 n=8 Tax=... 448 e-124 UniRef50_B2V8R2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 447 e-124 UniRef50_B8DS05 NADH dehydrogenase (Quinone) n=7 Tax=Deltaproteo... 445 e-123 UniRef50_D2PDB9 NADH dehydrogenase (Ubiquinone) n=10 Tax=Sulfolo... 444 e-123 UniRef50_A1ALP2 NADH-quinone oxidoreductase subunit D n=1 Tax=Pe... 444 e-123 UniRef50_B9L625 NADH-ubiquinone oxidoreductase n=3 Tax=Epsilonpr... 442 e-122 UniRef50_B5Y915 EchE n=1 Tax=Coprothermobacter proteolyticus DSM... 438 e-121 UniRef50_C2BU22 NADH dehydrogenase (Quinone) n=4 Tax=cellular or... 437 e-121 UniRef50_A1AUU6 Ech hydrogenase subunit E n=3 Tax=Bacteria RepID... 437 e-121 UniRef50_Q1AVI6 NADH-quinone oxidoreductase subunit D n=1 Tax=Ru... 437 e-121 UniRef50_C1AB36 NADH-quinone oxidoreductase chain D n=1 Tax=Gemm... 436 e-120 UniRef50_A1RZ50 NADH dehydrogenase (Ubiquinone) n=6 Tax=Archaea ... 433 e-120 UniRef50_A9G9T3 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=... 432 e-119 UniRef50_A0B812 F420H2 dehydrogenase subunit C n=6 Tax=Archaea R... 428 e-118 UniRef50_Q8U0Z6 Mbh12 membrane bound hydrogenase alpha (NADH deh... 426 e-117 UniRef50_B6YU98 Membrane bound hydrogenase, NiFe-hydrogenase lar... 426 e-117 UniRef50_D2LAG1 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 425 e-117 UniRef50_B3VS74 NADH-ubiquinone oxidoreductase chain 49kDa n=4 T... 424 e-117 UniRef50_C7NUN7 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus... 424 e-117 UniRef50_Q609T9 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 423 e-117 UniRef50_B1ZUJ2 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=... 421 e-116 UniRef50_A7I7D0 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 421 e-116 UniRef50_B5IS38 Respiratory-chain NADH dehydrogenase, 49 Kd subu... 420 e-116 UniRef50_Q2FTW4 Membrane bound hydrogenase subunit mbhL n=3 Tax=... 420 e-116 UniRef50_A8MBT0 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga ... 419 e-115 UniRef50_D2R4P3 NADH dehydrogenase (Quinone) n=3 Tax=Planctomyce... 419 e-115 UniRef50_C6A3Z3 Membrane-bound hydrogenase MBH 2, subunit Mbh2L ... 418 e-115 UniRef50_C9RKY1 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 418 e-115 UniRef50_C5CEV3 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 416 e-114 UniRef50_C6A407 Membrane-bound hydrogenase MBH 1, subunit Mbh1L ... 413 e-113 UniRef50_A6LMC4 NADH-quinone oxidoreductase subunit D n=14 Tax=c... 411 e-113 UniRef50_P15689 NADH-ubiquinone oxidoreductase 49 kDa subunit n=... 411 e-113 UniRef50_Q0F384 Hydrogenase subunit n=1 Tax=Mariprofundus ferroo... 411 e-113 UniRef50_B3ES55 NADH-quinone oxidoreductase subunit D n=19 Tax=B... 410 e-113 UniRef50_C0QBF7 HyfG n=3 Tax=Bacteria RepID=C0QBF7_DESAH 409 e-112 UniRef50_A3ZL03 NADH dehydrogenase (Ubiquinone) n=1 Tax=Blastopi... 409 e-112 UniRef50_A5GBN1 Ech hydrogenase subunit E n=20 Tax=cellular orga... 406 e-111 UniRef50_A4WMP9 NADH dehydrogenase (Ubiquinone) n=5 Tax=Thermopr... 405 e-111 UniRef50_B1VSH7 NADH-quinone oxidoreductase subunit D 2 n=6 Tax=... 404 e-111 UniRef50_P31895 Carbon monoxide-induced hydrogenase n=14 Tax=Bac... 404 e-111 UniRef50_B3DZF5 Formate hydrogenlyase subunit 5 n=8 Tax=Bacteria... 403 e-111 UniRef50_B3T914 Putative Respiratory-chain NADH dehydrogenase, 4... 400 e-110 UniRef50_Q3ZW31 Hydrogenase, group 4, HycE subunit n=3 Tax=Dehal... 399 e-109 UniRef50_A7C1S4 NADH-ubiquinone oxidoreductase subunit n=3 Tax=c... 396 e-109 UniRef50_B2HHH7 Formate hydrogenase HycE n=3 Tax=Actinomycetales... 396 e-108 UniRef50_Q0W3I1 Ech hydrogenase, subunit E n=2 Tax=Euryarchaeota... 396 e-108 UniRef50_C7N626 Ech hydrogenase subunit E n=25 Tax=cellular orga... 395 e-108 UniRef50_B3E6C1 NADH-ubiquinone oxidoreductase chain 49kDa n=2 T... 395 e-108 UniRef50_A3DKH4 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 ... 395 e-108 UniRef50_C1TPP0 Ni,Fe-hydrogenase III large subunit n=2 Tax=Syne... 395 e-108 UniRef50_B3TC54 Putative Respiratory-chain NADH dehydrogenase, 4... 393 e-107 UniRef50_Q6APF2 Related to hydrogenase, component E-formate hydr... 393 e-107 UniRef50_A9A347 NADH dehydrogenase (Quinone) n=3 Tax=Thaumarchae... 392 e-107 UniRef50_B8IYV5 NAD-dependent dehydrogenase subunit n=1 Tax=Desu... 391 e-107 UniRef50_B8J7E4 NADH-ubiquinone oxidoreductase chain 49kDa n=14 ... 391 e-107 UniRef50_D1YVS8 Ech hydrogenase subunit E n=1 Tax=Methanocella p... 391 e-107 UniRef50_D0L1P0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 391 e-107 UniRef50_C7I0C0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 390 e-107 UniRef50_C7DI97 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus ... 388 e-106 UniRef50_A4XCQ7 NADH-quinone oxidoreductase subunit D 2 n=22 Tax... 386 e-105 UniRef50_C8XAS3 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 383 e-105 UniRef50_B1YB08 NADH dehydrogenase (Quinone) n=5 Tax=Thermoprote... 383 e-105 UniRef50_B6AS24 Putative NADH-ubiquinone oxidoreductase, 49 kDa ... 380 e-104 UniRef50_C6PUG2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 379 e-103 UniRef50_D1LDT9 NADH dehydrogenase subunit 7 (Fragment) n=2 Tax=... 378 e-103 UniRef50_A6DAC0 Carbon monoxide-induced hydrogenase, large subun... 377 e-103 UniRef50_A9BJL6 NADH dehydrogenase (Quinone) n=3 Tax=Thermotogac... 376 e-102 UniRef50_D2L9H0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 376 e-102 UniRef50_C1XWY7 Ni,Fe-hydrogenase III large subunit n=1 Tax=Meio... 375 e-102 UniRef50_C6NX38 Ni,Fe-hydrogenase III large subunit n=1 Tax=Acid... 375 e-102 UniRef50_D2LH96 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 373 e-101 UniRef50_B9L8U2 Ech Hydrogenase, Subunit n=3 Tax=Epsilonproteoba... 371 e-101 UniRef50_Q2WAW4 Ni,Fe-hydrogenase III large subunit n=11 Tax=Alp... 371 e-101 UniRef50_C0SF51 NADH-ubiquinone oxidoreductase 49 kDa subunit n=... 369 e-100 UniRef50_C7LSU9 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 369 e-100 UniRef50_UPI00019012E4 NADH dehydrogenase subunit D n=1 Tax=Myco... 366 1e-99 UniRef50_A1KEQ8 Possible formate hydrogenase hycQ (FHL) n=14 Tax... 360 1e-97 UniRef50_A3DM94 Membrane bound protein complex subunit mbxL n=2 ... 359 1e-97 UniRef50_A0L9R4 Membrane bound protein complex subunit mbxL n=1 ... 359 2e-97 UniRef50_Q3JMD7 Hydrogenase subunit n=33 Tax=Burkholderia RepID=... 356 1e-96 UniRef50_C6HVM5 Putative hydrogenase-3 subunit (HycE) n=1 Tax=Le... 353 1e-95 UniRef50_Q8TY43 Ni,Fe-hydrogenase III large subunit n=1 Tax=Meth... 352 3e-95 UniRef50_Q57935 Uncharacterized protein MJ0515 n=17 Tax=Euryarch... 351 7e-95 UniRef50_Q21TB4 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 351 7e-95 UniRef50_UPI0001C42022 energy-converting hydrogenase B subunit N... 345 3e-93 UniRef50_Q58433 Uncharacterized protein MJ1027 n=12 Tax=Methanoc... 343 1e-92 UniRef50_A0LSU1 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 341 3e-92 UniRef50_C6WGH3 NADH dehydrogenase (Quinone) n=1 Tax=Actinosynne... 340 1e-91 UniRef50_A3CUR5 NADH dehydrogenase (Ubiquinone) n=3 Tax=Methanom... 337 9e-91 UniRef50_A9FF67 NAD-dependent dehydrogenase subunit n=1 Tax=Sora... 336 2e-90 UniRef50_Q5DUX5 NADH-ubiquinone oxidoreductase 49 kDa subunit n=... 333 1e-89 UniRef50_Q2NED9 EhbN n=5 Tax=Methanobacteriaceae RepID=Q2NED9_METST 331 5e-89 UniRef50_A5FW46 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 313 1e-83 UniRef50_A6Q6W4 Ni-Fe hydrogenase, large subunit HycE n=3 Tax=Ep... 307 8e-82 UniRef50_B0SCU7 Metal (Ni/Fe) hydrogenase, large subunit n=2 Tax... 301 6e-80 UniRef50_D1Y9R2 Respiratory-chain NADH dehydrogenase, 49 Kd subu... 293 1e-77 UniRef50_UPI000186E11F NADH-ubiquinone oxidoreductase 49 kDa sub... 292 3e-77 UniRef50_P21301 NADH-ubiquinone oxidoreductase 49 kDa subunit ho... 285 4e-75 UniRef50_Q0BPG8 Formate hydrogenlyase subunit 5 n=1 Tax=Granulib... 282 2e-74 UniRef50_D1HPS0 Whole genome shotgun sequence of line PN40024, s... 282 3e-74 UniRef50_A9B5Q0 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 274 5e-72 UniRef50_Q056K8 Metal (Ni/Fe) hydrogenase, large subunit n=4 Tax... 274 6e-72 UniRef50_C4PZT7 NADH-ubiquinone oxidoreductase fe-s protein 2 (N... 271 5e-71 UniRef50_C7JEU8 NADH-ubiquinone oxidoreductase 49kDa subunit n=8... 269 2e-70 UniRef50_A5UWP3 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 ... 264 5e-69 UniRef50_Q1WLV6 Mitochondrial NADH:ubiquinone oxidoreductase 49k... 252 3e-65 UniRef50_D1ICJ9 Whole genome shotgun sequence of line PN40024, s... 229 2e-58 UniRef50_Q7G6A6 NAD, putative n=3 Tax=Magnoliophyta RepID=Q7G6A6... 228 5e-58 UniRef50_Q978D6 Formate hydrogenlyase subunit 3 n=1 Tax=Thermopl... 227 7e-58 UniRef50_UPI000038DF6E Ni,Fe-hydrogenase III large subunit n=1 T... 221 7e-56 UniRef50_D1ICJ3 Whole genome shotgun sequence of line PN40024, s... 220 1e-55 UniRef50_Q9KGW7 NADH dehydrogenase I subunit C n=3 Tax=cellular ... 212 5e-53 UniRef50_UPI0001985C72 PREDICTED: similar to NADH dehydrogenase ... 194 8e-48 UniRef50_Q1PWG9 NADH-quinone oxidoreductase n=1 Tax=Candidatus K... 184 9e-45 UniRef50_Q0CI54 NADH-ubiquinone oxidoreductase 30.4 kDa subunit,... 183 1e-44 UniRef50_Q0EZQ7 NADH-quinone oxidoreductase n=1 Tax=Mariprofundu... 181 7e-44 UniRef50_B5YKI4 NADH-quinone oxidoreductase n=1 Tax=Thermodesulf... 180 1e-43 UniRef50_Q2W3I6 NADH-quinone oxidoreductase subunit C n=6 Tax=ce... 179 2e-43 UniRef50_A4GJ20 NADH-quinone oxidoreductase n=1 Tax=uncultured m... 178 7e-43 UniRef50_A7NIW0 NADH-quinone oxidoreductase subunit C n=6 Tax=Ch... 177 9e-43 UniRef50_B5YL31 NADH-quinone oxidoreductase n=1 Tax=Thermodesulf... 175 4e-42 UniRef50_P23710 NADH-ubiquinone oxidoreductase 30.4 kDa subunit,... 171 6e-41 UniRef50_A5G9B7 NADH-quinone oxidoreductase subunit C n=9 Tax=De... 169 3e-40 UniRef50_B3PY58 NADH-quinone oxidoreductase subunit C 2 n=9 Tax=... 168 4e-40 UniRef50_B8GAR8 NADH-ubiquinone oxidoreductase chain 49kDa n=3 T... 168 5e-40 UniRef50_A8IHL3 NADH:ubiquinone oxidoreductase ND9 subunit n=2 T... 167 9e-40 UniRef50_UPI0001926F1C PREDICTED: similar to NADH dehydrogenase ... 166 2e-39 UniRef50_Q28T74 NADH-quinone oxidoreductase subunit C n=7 Tax=Al... 165 3e-39 UniRef50_D1CCD3 NADH-quinone oxidoreductase n=1 Tax=Thermobaculu... 165 4e-39 UniRef50_A9W1N1 NADH-quinone oxidoreductase subunit C n=9 Tax=Al... 165 5e-39 UniRef50_Q2G5Y5 NADH-quinone oxidoreductase subunit C n=36 Tax=A... 164 1e-38 UniRef50_B3QUS1 NADH-quinone oxidoreductase n=1 Tax=Chloroherpet... 163 2e-38 UniRef50_A9MAI1 NADH-quinone oxidoreductase subunit C n=86 Tax=c... 163 2e-38 UniRef50_A1SE29 NADH-quinone oxidoreductase subunit C n=166 Tax=... 162 3e-38 UniRef50_C6XG24 NADH-quinone oxidoreductase n=1 Tax=Candidatus L... 162 3e-38 UniRef50_Q1IS34 NADH (Or F420H2) dehydrogenase, subunit C n=1 Ta... 162 4e-38 UniRef50_B9L171 NADH-quinone oxidoreductase n=2 Tax=Thermomicrob... 162 4e-38 UniRef50_Q9G4B8 NADH-ubiquinone oxidoreductase n=1 Tax=Thraustoc... 161 5e-38 UniRef50_B3RJ43 Putative uncharacterized protein n=1 Tax=Trichop... 161 5e-38 UniRef50_Q2S5J1 NADH-quinone oxidoreductase n=3 Tax=Rhodothermac... 160 1e-37 UniRef50_A8LIT7 NADH-quinone oxidoreductase subunit C n=51 Tax=A... 160 1e-37 UniRef50_B3DXN6 NADH-quinone oxidoreductase n=1 Tax=Methylacidip... 160 2e-37 UniRef50_D0LPX5 NADH-quinone oxidoreductase n=1 Tax=Haliangium o... 159 3e-37 UniRef50_C0Z771 NADH-quinone oxidoreductase n=1 Tax=Brevibacillu... 159 3e-37 UniRef50_B4UIA3 NADH-quinone oxidoreductase n=4 Tax=Anaeromyxoba... 158 6e-37 UniRef50_A6FCN4 NADH-quinone oxidoreductase n=1 Tax=Moritella sp... 158 6e-37 UniRef50_A0LDS5 NADH-quinone oxidoreductase n=1 Tax=Magnetococcu... 157 9e-37 UniRef50_UPI0000D52FC7 NADH Dehydrogenase I Chain C n=1 Tax=Psyc... 157 1e-36 UniRef50_B4UIA8 NADH (Or F420H2) dehydrogenase, subunit C n=4 Ta... 157 1e-36 UniRef50_A8M620 NADH-quinone oxidoreductase subunit C n=14 Tax=A... 156 2e-36 UniRef50_A8XGA9 C. briggsae CBR-NUO-2 protein n=2 Tax=Caenorhabd... 156 2e-36 UniRef50_A9GUY8 NADH-quinone oxidoreductase n=1 Tax=Sorangium ce... 156 3e-36 UniRef50_Q11XR7 NADH-quinone oxidoreductase n=4 Tax=Sphingobacte... 156 3e-36 UniRef50_B9S1B1 NADH-plastoquinone oxidoreductase 49 kD subunit,... 156 3e-36 UniRef50_D1RAG7 NADH-quinone oxidoreductase n=2 Tax=Parachlamydi... 155 3e-36 UniRef50_A9KBK6 NADH-quinone oxidoreductase subunit C n=7 Tax=Co... 155 4e-36 UniRef50_P34944 NADH-ubiquinone oxidoreductase 27 kDa subunit n=... 155 6e-36 UniRef50_O75489 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 155 6e-36 UniRef50_C1ZK67 NADH-quinone oxidoreductase n=1 Tax=Planctomyces... 155 7e-36 UniRef50_Q1V2T1 NADH-quinone oxidoreductase n=4 Tax=Bacteria Rep... 153 2e-35 UniRef50_B2UPT7 NADH-quinone oxidoreductase n=1 Tax=Akkermansia ... 153 2e-35 UniRef50_A3ERJ5 NADH-quinone oxidoreductase n=3 Tax=Leptospirill... 153 2e-35 UniRef50_Q2RU38 NADH-quinone oxidoreductase subunit C n=18 Tax=A... 152 3e-35 UniRef50_C1F9E1 NADH-quinone oxidoreductase n=1 Tax=Acidobacteri... 152 3e-35 UniRef50_B3CSH0 NADH-quinone oxidoreductase n=2 Tax=Orientia tsu... 152 4e-35 UniRef50_D2QGQ3 NADH (Or F420H2) dehydrogenase, subunit C n=1 Ta... 151 6e-35 UniRef50_C6W0T5 NADH-quinone oxidoreductase n=2 Tax=Flexibactera... 151 7e-35 UniRef50_Q02CU1 NADH-quinone oxidoreductase n=1 Tax=Candidatus S... 151 8e-35 UniRef50_Q04YA6 NADH dehydrogenase (Ubiquinone), C chain n=6 Tax... 151 9e-35 UniRef50_B0TH79 Proton-translocating NADH-ubiquinone oxidoreduct... 151 9e-35 UniRef50_C9RJJ7 NADH (Or F420H2) dehydrogenase, subunit C n=1 Ta... 150 1e-34 UniRef50_A9II05 NADH-quinone oxidoreductase subunit C n=138 Tax=... 150 2e-34 UniRef50_B3ET79 NADH-quinone oxidoreductase n=1 Tax=Candidatus A... 150 2e-34 UniRef50_B8J1D5 NADH-quinone oxidoreductase n=1 Tax=Desulfovibri... 149 2e-34 UniRef50_B1ZRT1 NADH-quinone oxidoreductase n=3 Tax=Verrucomicro... 149 2e-34 Sequences not found previously or not previously below threshold: UniRef50_Q5P2H0 Subunit of formate hydrogenlyase-like membrane c... 328 4e-88 UniRef50_A6UVJ6 Hydrogenase, component E-formate hydrogenlyase s... 307 8e-82 UniRef50_B5ZIZ9 Ni Fe-hydrogenase III large subunit-like protein... 192 3e-47 UniRef50_D2PJN4 Formate hydrogenlyase subunit 5 (HycE) n=10 Tax=... 188 5e-46 UniRef50_Q6L0U1 Formate hydrogenlyase subunit 5 n=1 Tax=Picrophi... 176 2e-42 UniRef50_Q5FU77 Putative uncharacterized protein n=1 Tax=Glucono... 165 4e-39 UniRef50_B5I9E7 Ni Fe-hydrogenase III large subunit-like protein... 152 4e-35 >UniRef50_D2U4G0 NADH-quinone oxidoreductase chain C/D n=1 Tax=Arsenophonus nasoniae RepID=D2U4G0_9ENTR Length = 614 Score = 766 bits (1979), Expect = 0.0, Method: Composition-based stats. Identities = 506/599 (84%), Positives = 545/599 (90%), Gaps = 4/599 (0%) Query: 1 MTDLTAQE---PAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVG 57 +TD QE P WQT DH DDP+I LRN+F PDAFT+Q+TRTG+ V+WIKREQLL V Sbjct: 17 ITDQITQESVRPVWQTYDHCDDPIILALRNQFSPDAFTIQSTRTGMLVIWIKREQLLAVI 76 Query: 58 DFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEND 117 +FLKK PKPYVMLFDLHG+DER R +R GLP ADFSVFYHLISI+RNRDIMLKVAL+E D Sbjct: 77 EFLKKQPKPYVMLFDLHGVDERQRVYRHGLPDADFSVFYHLISIERNRDIMLKVALSEKD 136 Query: 118 LHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 177 L+VP+ LFPNANWYERE WD+FGITF GHPNLRR++MP TW+GHPL KDYPARATEF Sbjct: 137 LNVPSLVSLFPNANWYEREVWDMFGITFTGHPNLRRLLMPVTWQGHPLCKDYPARATEFD 196 Query: 178 PFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEE 237 PF LTK K DLEME+LTFKPEEWGM RG E+EDFMFLNLGPNHPS+HGAFRIVLQLDGEE Sbjct: 197 PFVLTKQKLDLEMESLTFKPEEWGMARGNEHEDFMFLNLGPNHPSSHGAFRIVLQLDGEE 256 Query: 238 IVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPD 297 I+DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGI VP+ Sbjct: 257 IIDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIDVPE 316 Query: 298 RVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPA 357 RV IRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYD++EAITGFRMHPA Sbjct: 317 RVMTIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDIIEAITGFRMHPA 376 Query: 358 WFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALE 417 WFRIGGVAHDLP+GW +LL+EFLDWMPKRL SY KAALQN+ILKGRS GVAAY KEAL+ Sbjct: 377 WFRIGGVAHDLPQGWQKLLQEFLDWMPKRLDSYVKAALQNSILKGRSVGVAAYTTKEALD 436 Query: 418 WGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRIL 477 WG TGAGLRATG+DFD+RK RPYSGYENF+FE+P+G DCY RVMLKVEELRQSL IL Sbjct: 437 WGVTGAGLRATGLDFDIRKWRPYSGYENFEFEVPIG-NNGDCYDRVMLKVEELRQSLHIL 495 Query: 478 EQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATK 537 +QCLNNMP GPFKADHPLTTPPPKERTLQHIET+I HFLQVSWGPVMPANE+FQMIEATK Sbjct: 496 KQCLNNMPAGPFKADHPLTTPPPKERTLQHIETMINHFLQVSWGPVMPANEAFQMIEATK 555 Query: 538 GINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 GINSYYLTSDG+TMSYRTRVRTPSFAHLQQIPA IRGSLVSDLIVYLGSIDFVMSDVDR Sbjct: 556 GINSYYLTSDGNTMSYRTRVRTPSFAHLQQIPAVIRGSLVSDLIVYLGSIDFVMSDVDR 614 >UniRef50_Q2YAA3 NADH-quinone oxidoreductase subunit C/D n=259 Tax=cellular organisms RepID=NUOCD_NITMU Length = 608 Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 368/587 (62%), Positives = 450/587 (76%), Gaps = 10/587 (1%) Query: 19 DPVIGELRNRFGPDAFT--------VQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVM 69 V+ EL+NRFGP VQ T +P W+ R ++ EV +LK K +PY M Sbjct: 23 SDVLEELKNRFGPPGTDNPGGPMGVVQKTGDDLPTQWVSRNRVHEVLHYLKLKAERPYRM 82 Query: 70 LFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPN 129 L+DL +DER R HRE PA+ F+V YHL+S +RN D+ LKVAL + DL +PT T ++P Sbjct: 83 LYDLTAIDERTRVHREDQPASRFTVIYHLLSFERNADVCLKVALTDTDLRMPTITDIWPA 142 Query: 130 ANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLE 189 ANWYERE WD+FGI FDGHP+LRRI++P W+GH LRKD+PARATE PF L+ K++ E Sbjct: 143 ANWYEREIWDMFGIVFDGHPHLRRILLPPWWQGHALRKDHPARATEMEPFHLSTEKEEAE 202 Query: 190 MEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHH 249 E L F PEEWGM+R + DFMFLNLGPNHPS HG FRIVLQLDGEEI+D VP+IG+HH Sbjct: 203 QETLRFHPEEWGMRRTHDGTDFMFLNLGPNHPSVHGVFRIVLQLDGEEIIDAVPEIGFHH 262 Query: 250 RGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSEL 309 RGAEKMGERQSWH+YIPYTDRI+YLGG +N +PYVLAVEKLAGI VPDRV V+RVM++E Sbjct: 263 RGAEKMGERQSWHTYIPYTDRIDYLGGVMNNLPYVLAVEKLAGIEVPDRVKVMRVMMAEF 322 Query: 310 FRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP 369 FRI SHL++ TF QD+GA++PVFF FTDR++++D+VEAI G RMHP+W+RIGGVA DLP Sbjct: 323 FRIASHLVFYGTFTQDLGALSPVFFMFTDRERVFDVVEAICGGRMHPSWYRIGGVAQDLP 382 Query: 370 RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATG 429 GWDR++R+FLD+MP RL Y+K A+ N ILK R++GV Y EA+EWG TG LRA G Sbjct: 383 NGWDRMVRDFLDYMPARLDEYDKIAVGNRILKARTRGVGGYSIDEAIEWGVTGPNLRACG 442 Query: 430 IDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPF 489 ++D RKARPYSGY+ F+F++P G DCY R ++V+E+RQSLRI++QCL NMP G Sbjct: 443 FEWDFRKARPYSGYDQFEFDVPTGQH-GDCYDRCAVRVQEIRQSLRIIDQCLENMPAGAH 501 Query: 490 KADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS 549 KADHPLTTPP K+ TL IETLI HFL VSWGPV+P E+F IEATKG N YYL SDG+ Sbjct: 502 KADHPLTTPPLKKHTLHDIETLIDHFLGVSWGPVIPPGEAFVGIEATKGNNGYYLISDGN 561 Query: 550 TMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 T +YR R+RTPSF HLQ IP RG ++SDLI LGSIDFVM+DVDR Sbjct: 562 TTAYRVRIRTPSFPHLQMIPLISRGLMISDLIAILGSIDFVMADVDR 608 >UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 Tax=cellular organisms RepID=NUBCD_PELCD Length = 794 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 274/578 (47%), Positives = 374/578 (64%), Gaps = 11/578 (1%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMDE 78 P++ +LR RFG D Q +P + Q+ E+ FLK + +PY L DL +DE Sbjct: 227 PLLEQLRERFGDDV--RQEEGADMPTLVADPAQVPELLRFLKQDIDQPYERLEDLTAIDE 284 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R+ R PA D ++ YHL+S +R + +K L + VP+ T L+P ANWYERE + Sbjct: 285 TARSQR---PAHDLTMVYHLLSFERAGYLRVKAPLRNDRAEVPSITGLWPAANWYEREAF 341 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 D+FG+ F GHP+LRRI+MP+ W+GHPLRK +P+RAT+ PF A + E F Sbjct: 342 DMFGVRFAGHPDLRRILMPEGWQGHPLRKSHPSRATDMPPFTRDTATTMVPPEGSHF--- 398 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 + + +N+ LNLGP HP HG R++LQL GEEIVD +IGYHHRGAEK+ ER Sbjct: 399 -FSNRAPVDNQSLSILNLGPQHPGTHGILRVILQLAGEEIVDLDSEIGYHHRGAEKIAER 457 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY 318 Q W+ YIPYTDRI+YL G +N + Y+ +VE L G+ VP R IRV+LSELFRI SHL++ Sbjct: 458 QHWNQYIPYTDRIDYLAGSLNNLAYLYSVETLCGVEVPPRARYIRVLLSELFRIASHLVW 517 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 + TF DVGAMTPVF+AF R+KI+D++E ITG RMHPAWFRIGGV DLP GW + Sbjct: 518 LGTFAHDVGAMTPVFYAFDSREKIFDIIELITGGRMHPAWFRIGGVPDDLPDGWLAAVEA 577 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 F R+ +++ I + R++G+ ++A+E G +G LRATG+ +D+RK+ Sbjct: 578 FTRDFEARIDEFDRLLTGGPIFRARTEGIGTVSRQQAVELGFSGPNLRATGLAWDLRKSM 637 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY GY+ FDF++ V G DC+ R ++++ ELRQSLRI+ Q MP+G + +D Sbjct: 638 PYGGYDEFDFDV-VTAGGGDCFARYLVRLGELRQSLRIVRQAAEGMPQGRWISDQYRYAY 696 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 P +E LQ IE+LI HFL VS GP P E ++ IE++KG YY SDG T +YR R+R Sbjct: 697 PKREDGLQDIESLIHHFLHVSRGPAAPRGECYRAIESSKGECGYYAVSDGGTGAYRLRIR 756 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 TPSF HLQ +P RG LV+D+I LGS+D+V++D+DR Sbjct: 757 TPSFPHLQALPQLSRGRLVADVITILGSLDYVLADLDR 794 >UniRef50_D2MJM9 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJM9_9BACT Length = 583 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 217/590 (36%), Positives = 321/590 (54%), Gaps = 20/590 (3%) Query: 19 DPVIGELRNRFGPDAFTVQAT-RTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGM 76 V+ L RF +V+ + G ++ + L+EV FL P + L D+ Sbjct: 2 HRVLETLHERFPEAVLSVREDPQRGDLSAQVRAQDLVEVARFLHDDPGMAFDHLTDICSA 61 Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D R F V YH +S+ N I LK + E + T T ++ AN+ ERE Sbjct: 62 DYPDDLER-------FEVIYHFLSLPHNTRIRLKTRVTEEQPTLGTVTSIWKGANFLERE 114 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWK-GHPLRKDYPARATEFSPFELTKAKQDLEMEALTF 195 +DL GITF+GHP+LRRI++P+ ++ GHPLRKD+P + + D T Sbjct: 115 VYDLMGITFEGHPDLRRILLPEDYEEGHPLRKDFPTEGKGWRSTFDFIPRLDEPESEWTE 174 Query: 196 KPEEWGM---------KRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIG 246 + + + LN+GP HPS HG R+VL+LDGE + VPD+G Sbjct: 175 REIPQDQRHMFLAGDAPESAKRTTELLLNMGPQHPSTHGVLRVVLELDGERVAKAVPDMG 234 Query: 247 YHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVML 306 Y HRG EK+ E + IP+TDR++Y+ N YV AVEKL G+T+P+R +R ++ Sbjct: 235 YLHRGVEKLAEGLHYMQVIPHTDRLDYVCAMTNNYAYVRAVEKLVGVTIPERAEYVRTIV 294 Query: 307 SELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAH 366 +E+ RI HL ++ T D+GAMT F+ F +R+ + D E + G R+ ++RIGGV Sbjct: 295 AEVQRIVGHLFWLGTQALDIGAMTVFFWTFREREVLLDFFEQLCGARLTLNYYRIGGVDG 354 Query: 367 DLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR 426 DL LR FL P+ + Y+ +N I R++ VA A++A+ +G TG LR Sbjct: 355 DLTPALIERLRGFLKTFPEHVQEYDTLLQRNRIWVARTKNVAVISAEDAINFGLTGPTLR 414 Query: 427 ATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE 486 +G+ +DVRK PY Y+ ++++PVG G D Y R ++VEE++QS RI+EQCL+ +PE Sbjct: 415 GSGVAYDVRKLEPYGVYDRVEWDVPVGKG-GDTYDRYWIRVEEMKQSARIIEQCLDQLPE 473 Query: 487 GPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS 546 GP AD P PP K ++ +E+LI HF+ + G P E++ E KG ++L S Sbjct: 474 GPIMADMPQVIPPAKPNVMRDMESLIHHFIIFTQGFKPPKGETYCGTEVPKGELGFFLIS 533 Query: 547 DGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 DGS YR ++R+PSF H+ RG L+SD+I G+ D VM + DR Sbjct: 534 DGSPRPYRMKIRSPSFVHMGAFDFMARGYLISDIITIFGTYDIVMGECDR 583 >UniRef50_Q2C5T4 NADH dehydrogenase I, B/C/D subunits n=2 Tax=Photobacterium RepID=Q2C5T4_9GAMM Length = 565 Score = 610 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 254/575 (44%), Positives = 357/575 (62%), Gaps = 21/575 (3%) Query: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKL-PKPYVMLFDLHGMDERLRTH 83 L RF A + G +K+E L++ FLK + MLFDL +DE R Sbjct: 9 LIERFDAKAPNHE--IIGCESFEVKKEHLIDTLHFLKNEASSRFEMLFDLSAIDECER-- 64 Query: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143 SVFY+L+S+ + I ++ +A + + VPT L+PNANWYERE +D+FGI Sbjct: 65 -----GGGLSVFYYLLSVKNKQFISIRTHIANDTIEVPTVVGLWPNANWYEREVYDMFGI 119 Query: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS-PFELTKAKQDLEMEALTFKPEEWGM 202 F HP+LRRI+ WKGHPLRK YP RAT PF+L D M++ + ++ Sbjct: 120 KFTDHPDLRRILTFDFWKGHPLRKSYPCRATLMDEPFDLEGPDFDDVMKSYDIQGKQ--- 176 Query: 203 KRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWH 262 ++ M LN+GPNHP G R+ +++ GE I D +IG+HHRGAEK+ ER ++H Sbjct: 177 -----DDGSMVLNIGPNHPGTDGVIRLKVKMKGEFIEDLDQEIGFHHRGAEKIAERHTFH 231 Query: 263 SYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF 322 +YIPYTDRI+YLGG E+PY+L +E + GI VP+R +R+ML ELFRI+SHL++ + Sbjct: 232 NYIPYTDRIDYLGGVAGELPYLLGLEAMTGIEVPERAKTMRIMLCELFRISSHLVWFGSI 291 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDW 382 ++G M P F+AFT+R+KI+D++E I G RMHPA+FRIGGV+ DLP GW + Sbjct: 292 THNLGGMAPAFYAFTEREKIFDVIELICGGRMHPAFFRIGGVSQDLPDGWQDKVEHACQG 351 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 + + + EK + I K R+Q +A Y AL+WG TG LRATGI+FD+RK PY G Sbjct: 352 IEQLVPDLEKLMTHSMIFKIRTQNIAVYSQSMALDWGLTGPNLRATGINFDMRKDFPYMG 411 Query: 443 YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH-PLTTPPPK 501 YE++DF++PVG D YTR +L+V+E+ +SL+I+ Q MPEGP AD+ P P K Sbjct: 412 YEDYDFDVPVGQD-GDAYTRTVLRVQEVVESLKIIRQAAARMPEGPILADNAPSFGFPRK 470 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 + L+ IETLI F+ G P E+F E KG+ SY+ S+G+ YR R+RTPS Sbjct: 471 QNALRDIETLIHSFVDTGRGFNFPVAETFYATETAKGVTSYHTISNGTGCPYRVRIRTPS 530 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F H Q + A +G L+S++I +GSID+V++D+DR Sbjct: 531 FTHFQSVKAVSKGDLLSNIICLIGSIDYVLADIDR 565 >UniRef50_Q6MIR5 NADH-quinone oxidoreductase subunit C/D n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOCD_BDEBA Length = 560 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 194/555 (34%), Positives = 297/555 (53%), Gaps = 21/555 (3%) Query: 42 GVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISI 101 G V+ + +E + FL++ + L D+ G D R R F V Y+L + Sbjct: 27 GDDVIEVPKEDAPALLLFLRE-SGQFDFLMDVCGADYPSREKR-------FDVVYNLFNS 78 Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 + + +K + E + + T + A+W+ERE +D+FGI F+GHPNLR+I+ + Sbjct: 79 KDSSRLRVKAQVGEGE-SIGTAIPAYRGADWFEREAYDMFGIIFEGHPNLRKILTHHQFV 137 Query: 162 GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHP 221 GHPLRKDY A + E G N+ ++ LN+GP+H Sbjct: 138 GHPLRKDYDANNQQACT-----------NSLPIHFNNEPGSPGDVLNDKYLPLNIGPSHT 186 Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEM 281 + HG R++ ++DGE IV C +IGY HR EKM E ++ IPYTDR+ Y +N + Sbjct: 187 AMHGTLRVMAEMDGETIVRCNNEIGYLHRCFEKMAETHPYNQVIPYTDRLNYCSAPMNNI 246 Query: 282 PYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQK 341 Y AVE+L G+ +P + +RV+L+EL RI H + I T D+GA+T F+ F R+K Sbjct: 247 GYCKAVERLLGVEIPPKAQAMRVILAELSRIIDHTIAIGTGAMDLGALTSFFYMFGMREK 306 Query: 342 IYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILK 401 +Y L E + G R+ + RIGG+A D P GW + + + K + N I Sbjct: 307 VYGLFEKLCGARLTVSMTRIGGMAQDAPEGWFDEVLALVKEIRKGTDEMANMVIDNKIFI 366 Query: 402 GRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYT 461 R++ V A +A++WG TG LRA G++ D+RKA+PY GY+ DF++PVG D Y Sbjct: 367 QRTKNVCPVSAADAIQWGYTGPMLRACGVNLDLRKAQPYYGYDALDFDVPVGTN-GDIYD 425 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWG 521 R +++ EE+RQS+RI+EQ N+P G + P K+ +IE L+ HF+ + G Sbjct: 426 RYLVRFEEMRQSVRIIEQVCKNVPGGDYTIRDKGIVLPEKKDVYGNIEGLMNHFMLIIKG 485 Query: 522 PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLI 581 P E + EA G +YL SDGS YR +VR P FA Q P ++G++++D I Sbjct: 486 LRPPVGEVYDATEAANGELGFYLVSDGSANPYRLKVRPPCFAIYQSFPTVVKGAMLADAI 545 Query: 582 VYLGSIDFVMSDVDR 596 + S++ + ++DR Sbjct: 546 ATVASMNLIAGELDR 560 >UniRef50_C6NSM4 NADH dehydrogenase I, B/C/D subunits n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSM4_9GAMM Length = 565 Score = 576 bits (1485), Expect = e-163, Method: Composition-based stats. Identities = 240/577 (41%), Positives = 334/577 (57%), Gaps = 15/577 (2%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDER 79 + L+ F A A + L +L+ + PY L+DL MDER Sbjct: 3 LAEALQKEFS--ATPFTAACDDCLDFSLPTANLKPCLRYLRDDWRSPYRCLWDLTAMDER 60 Query: 80 LRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWD 139 F++ YHL + + L+V L P+ T L+ NANWYERE +D Sbjct: 61 P-------SGGGFTLIYHLFNYAVGELLRLRVPLPAGQETAPSLTDLYANANWYEREVYD 113 Query: 140 LFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEE 199 LFG+ F GHP+LRRI++P W+GHPLRK+ RATE P + + + P+ Sbjct: 114 LFGLRFAGHPDLRRILLPPQWRGHPLRKEEAIRATERPPIVIDREHLQERLGEYQRSPDG 173 Query: 200 WGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ 259 + G + M LN+GP+HP HG R +L+L GEEIV PDIGYHHRG EK+ E Sbjct: 174 QALDDG----ETMVLNVGPHHPGTHGILRYILRLRGEEIVAVDPDIGYHHRGVEKIAEGH 229 Query: 260 SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYI 319 S+H++IPYTDR++YLGG + E PY+ A+EKLA I VP+R IR +L+EL RI+SHL+++ Sbjct: 230 SYHNFIPYTDRVDYLGGVLGEWPYLRAIEKLAAIHVPERAEGIRTLLAELCRISSHLVWL 289 Query: 320 STFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREF 379 ++ D+G M P F+AF DR + +L+E TG R+HP +FRIGGVA DLP GW L Sbjct: 290 GSYGNDLGTMGPAFYAFRDRAWLLELMERFTGGRLHPQFFRIGGVADDLPEGWRSDLLAL 349 Query: 380 LDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARP 439 L + K L E+ ++N I + R++GV A++A W T LR+TG FD+RKA P Sbjct: 350 LRRIEKGLPDSERLTVENPIFRARTEGVGVVTAEQAERWCATSILLRSTGRAFDLRKAAP 409 Query: 440 YSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 Y Y+ DFE+PV D ++R L + E+R+S+RIL Q + +PEGP A Sbjct: 410 YGLYDRVDFEVPVTT-AGDAWSRTWLHIAEIRESIRILRQLADILPEGPTLACDAPLALM 468 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 PK RTL IETLI HF Q++ P + + E+ +G+ Y++ SDG YR RVRT Sbjct: 469 PKSRTLLDIETLIHHFEQMADAFGPPPGSALGLGESARGLLGYFVVSDGGPKPYRLRVRT 528 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SFAH+Q I RG + D I +GS+D+V++D+DR Sbjct: 529 GSFAHVQMITELGRGLRLPDFIATIGSLDYVLADLDR 565 >UniRef50_B2V8J2 NADH-quinone oxidoreductase subunit C/D n=15 Tax=Aquificales RepID=NUOCD_SULSY Length = 576 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 193/590 (32%), Positives = 298/590 (50%), Gaps = 37/590 (6%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERL 80 +L RFG + + GV V + +++ +E FLK+ P+ + M DL +D Sbjct: 9 AKKLEERFG---YPKVSEGKGVLSVEVPKDKFIEFLTFLKEDPEYQFKMFIDLTIIDHGE 65 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 + + F L S I++K + +PT T L+ A W ERE WD+ Sbjct: 66 KENP------RFQGVVILFSPKNQERIIVKTW--AENETLPTLTNLWKGAKWAEREAWDM 117 Query: 141 FGITFDGHPNLRRIMMPQTWKGHPLRKDYPARA--TEFSPFELTKAKQDLEMEALTFKPE 198 FGI F+GH NL R+++ +T+ HPLRKD+P P + + + Sbjct: 118 FGIKFEGHENLVRMLLWETYPYHPLRKDFPLEGIKDTELPSLNETLRGENLEGLFNYDRM 177 Query: 199 EWGMKRGTENE-----------DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGY 247 + + E + LN GP HP HG + LDGE + C IG Sbjct: 178 HTALPTMEDLEITQKKRMPVKTSQIVLNWGPLHPGTHGTIWFLFDLDGEYVKQCDIIIGQ 237 Query: 248 HHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLS 307 HRG EK+GE +W +IPYTDR++Y+ YVLA EK+ GI VP++ IR M++ Sbjct: 238 LHRGVEKLGENVNWQQFIPYTDRMDYIAAINENHAYVLAAEKMLGIEVPEKAKWIRTMMA 297 Query: 308 ELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHD 367 EL RINSHLL++ T+ D+GA+T + F +R+KI D++E ITG R +FRIGGV D Sbjct: 298 ELSRINSHLLWLGTYALDLGALTMFLYTFREREKIMDIIEGITGARFTINYFRIGGVFAD 357 Query: 368 LPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRA 427 LP G + + +P+R+ YE +N + R++ V ++ ++G TGA R Sbjct: 358 LPYGALDAIEHLIKDLPQRINDYETLLTRNRVWLSRNKDVCVITEEDVYQYGLTGAVARG 417 Query: 428 TGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEG 487 +G+ +DVRK Y Y +F+IPVG D Y R ++++EE+RQS+RI+EQC+ + Sbjct: 418 SGVPYDVRKIDKYDAYGEVEFDIPVGEK-GDSYDRYLVRMEEMRQSIRIIEQCIAKL--R 474 Query: 488 PFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD 547 D P P E+ L+ G +PA E++ + +G +Y+ + Sbjct: 475 KMSKDDPYFFQTPDEKKLKV--------TIDGRGMKLPAGETYASSDNPRGELGFYIYNK 526 Query: 548 GST-MSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++R R+R+ +F +LQ AI G ++D I L +ID V+ + DR Sbjct: 527 KDGLKAHRMRIRSGAFYNLQVFTKAIIGRPIADAITLLSTIDPVVGETDR 576 >UniRef50_B6YTW8 Hydrogenase 4, component G or formate hydrogen lyase, subunit 5 n=5 Tax=Thermococcaceae RepID=B6YTW8_THEON Length = 584 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 164/597 (27%), Positives = 258/597 (43%), Gaps = 67/597 (11%) Query: 6 AQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLE-VGDFLKKLP 64 E A TR++LD E+ +FG V+ ++ ++RE L E V FL Sbjct: 19 GDEKAKVTREYLD-----EIIEKFGEKIRDVKQAAYNQWIITVEREDLPEIVLYFLNHPE 73 Query: 65 KPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRD--IMLKVALAENDLHVPT 122 L + DER + FS+ Y L + D + ++ L E+D + Sbjct: 74 WKETQLSSMVATDERPLNGK-------FSITYWLSVNGKAGDFYLGVRAYLPEDDPRFTS 126 Query: 123 FTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFE 180 ANWYERE ++ G+T +GHP+ RR+++P W +PLRKD+ + Sbjct: 127 IAAKHRGANWYEREAMEMLGLTAEGHPDPRRLVLPDDWPSCVYPLRKDFHYSNSP----- 181 Query: 181 LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVD 240 P E +D + + GP H + A L + GE I D Sbjct: 182 ----------------PGEKFYPYKEPKKDEIVVPYGPYHVALEEAAHFRLYVKGETITD 225 Query: 241 CVPDIGYHHRGAEKMGERQ-SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRV 299 Y HRG EK+ E + ++ +RI + GC + Y AVE GI VP+R Sbjct: 226 VDYRGFYAHRGIEKISEGRLTYDQVCFIAERICGICGCTHSTAYCQAVENAGGIEVPERA 285 Query: 300 NVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWF 359 IR ++ E+ R++SHLL VG A+ R+ + L E +TG R Sbjct: 286 EYIRTIVLEIERLHSHLLNFGIVSHLVGYDYGFMKAWRIREHVMWLAERLTGNRKTYGML 345 Query: 360 RIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWG 419 +GGV DL L+ + L + + A+ + R +GV K A EW Sbjct: 346 LVGGVRRDLLEYRKSLIEDVLKKIKTEFSELVDEAISTSTFVKRLEGVGVLPYKVAKEWD 405 Query: 420 TTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQ 479 G R +G DFDVR+ PY+ Y+ DF++PV D R ++++EE+ +S+ I+EQ Sbjct: 406 VDGPLGRGSGRDFDVRRDHPYAAYKYLDFKVPVYKE-GDVLARALVRIEEVFESIWIIEQ 464 Query: 480 CLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGI 539 L+ MP G A+ + + P +E+ M EA +G Sbjct: 465 ALDQMPGGDILAE---------------------------YKEIPPYSEAIGMTEAPRGE 497 Query: 540 NSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 N +Y+ + + YR R R ++ +L +P +RG ++D + + SID S +R Sbjct: 498 NIHYVMTGENNKVYRYRARAATYNNLPAVPDMMRGYTIADAPLIVASIDPCYSCTER 554 >UniRef50_B6YWP8 Hydrogenase 4, subunit 5 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWP8_THEON Length = 540 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 155/557 (27%), Positives = 240/557 (43%), Gaps = 63/557 (11%) Query: 43 VPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISID 102 + V + + E+ L + Y G+DER P YH+ + D Sbjct: 18 MTVAEVGASNIREIARALFERGYYYSSGM---GVDER--------PINGRFAMYHIFNCD 66 Query: 103 RNRD-IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 ++LK+ E VP+ T + A W ERE D+ GI F GHP R+++P W Sbjct: 67 TEGRYVVLKITSPEGSPEVPSITPVIKGAEWSEREAMDMLGIVFSGHPKPERLILPDDWP 126 Query: 162 G--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPN 219 +PLRKD+P + K ++ +D M + LGP Sbjct: 127 EGVYPLRKDFPYNKKLPPSKPIEKERE--------------------HKKDVMEIPLGPY 166 Query: 220 HPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ-SWHSYIPYTDRIEYLGGCV 278 HPS H L + G+++VD + HRG EK+ E + + + +RI + GC Sbjct: 167 HPSLHEPEYFELYVKGDKVVDAEYRGFHIHRGMEKLAESRMTINQIPFLAERICGICGCT 226 Query: 279 NEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTD 338 + Y AVE AGI VP+R IR ++ E+ RI+SHLL+ +G + + Sbjct: 227 HSAAYCQAVEDAAGIYVPERAQYIRTIMLEVERIHSHLLWFGVVCHLLGFDSGFMHIWRA 286 Query: 339 RQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNT 398 R+ I D+ E ITG R +GGV D+ + LD + K + Sbjct: 287 REYIMDIAELITGNRKTYGINIVGGVRRDITEDKKEKTLKLLDMVEKESREVLDNIAEMK 346 Query: 399 ILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSD 458 L+ R +GV KEA E G G R++GID DVR+ PY+ Y++ DF++PV D Sbjct: 347 ELRERMEGVGVLPKKEAREIGVVGPMARSSGIDTDVRRDHPYAAYKDLDFKVPVYKE-GD 405 Query: 459 CYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQV 518 + R +++ EE+ +S ++ Q L NMP G D Sbjct: 406 VFARFLVRYEEIFESFNMIRQALENMPPGELINDEY------------------------ 441 Query: 519 SWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVS 578 + P + EA +G N + + + G M YR R ++ +L +P +RG+ V+ Sbjct: 442 ---EIPPFKLGIGVTEAPRGENIHAVITWGENMIYRWHPRAATYNNLPAVPIMLRGNDVA 498 Query: 579 DLIVYLGSIDFVMSDVD 595 D + + SID S D Sbjct: 499 DAPLIIASIDPCFSCTD 515 >UniRef50_A0RMD1 NADH-quinone oxidoreductase subunit C/D n=5 Tax=Bacteria RepID=NUOCD_CAMFF Length = 561 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 182/575 (31%), Positives = 299/575 (52%), Gaps = 21/575 (3%) Query: 27 NRFGPDA-FTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHRE 85 +F +T G+ V I + E F++ + +L D+ +D Sbjct: 3 EKFSSKFNVLKHSTTNGLLSVQINPNDIYEAVLFVRDN-IGFEILADIVCVDNLYID--- 58 Query: 86 GLPAADFSVFYHLISID-RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGIT 144 FS++Y I N I + + + + V + ++ +ANW ERE +D FG+ Sbjct: 59 --KEKRFSLYYIFRKISSENLCIYIDIDI---NQSVKSVESIYKSANWGERECFDQFGVK 113 Query: 145 FDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKR 204 F+ HPNL+RI+ + ++G+PLRKDYP + + D + + + + G+ Sbjct: 114 FENHPNLKRILNHKDFQGYPLRKDYPITKYQ------VLYESDDLVGEMKNEMQRAGLAS 167 Query: 205 GTENE---DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 +E + FLN+GP+HP+ HG R + LDGE+I+ CV +IGY HRG EK E S+ Sbjct: 168 EENDEFKTKYTFLNIGPSHPATHGTIRNFVALDGEKIISCVTEIGYLHRGFEKACENHSY 227 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 IPYTDR+ Y +N + Y AVE+ G+ +PDR +RV+L EL RI H + + Sbjct: 228 AQIIPYTDRLNYCSAMLNNVGYAKAVEEALGLNLPDRGIFMRVILGELARIIDHEVCLGA 287 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 D+G +T ++ + R++IY+ + +TG R ++ RIGG+A+D GW L L Sbjct: 288 MFVDMGGLTNYWYLYNPRERIYNFLSKLTGARFTNSFARIGGMANDFYDGWKEELLAHLK 347 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + K + +N I R Q + A +AL +G +G LRA+G+ FD+RK +PY Sbjct: 348 DVEKGVDDTMILIEKNRIFLDRVQNICKINANDALSYGFSGPNLRASGVSFDLRKDKPYY 407 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y++FDF +PVG D Y R+ ++ E+R+S+ I+ Q + +PEG D P K Sbjct: 408 YYDSFDFSVPVGSE-GDIYDRMFVRFFEMRESISIIRQAIKLIPEGKISVDDKDVFLPSK 466 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 ++ +IE+LI HF + G +P + E G +++ S+ YR ++R P Sbjct: 467 DQVYSNIESLINHFKLIFDGIKLPNGHFYSASEGANGELGFFIFSNSEPNPYRVKLRPPC 526 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F L + ++GSL++D I+ LGS++ + ++DR Sbjct: 527 FYALNAFSSMVQGSLIADSILNLGSLNIIAGELDR 561 >UniRef50_B7R5K6 Hydrogenase-4 component G n=1 Tax=Thermococcus sp. AM4 RepID=B7R5K6_9EURY Length = 545 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 156/557 (28%), Positives = 243/557 (43%), Gaps = 63/557 (11%) Query: 43 VPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISID 102 V V + E++ E+ L Y G+DER P YH+ + + Sbjct: 18 VTVAEVSPERVREIAKGLFNAGCYYSCGM---GVDER--------PVNMRFAMYHVFNCE 66 Query: 103 -RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 R ++LK+ N+L +P+ T + A+W ERE D+ GI F+GHP R+++P+ W Sbjct: 67 AERRHVILKLTTPTNELTLPSITPVIEGASWSEREAMDMLGIIFEGHPEPERLILPEDWP 126 Query: 162 G--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPN 219 +PLRKD+P K+ D + + LGP Sbjct: 127 EGVYPLRKDFPYNKKLPPAKPKEGRKKP--------------------RPDIIEVPLGPY 166 Query: 220 HPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ-SWHSYIPYTDRIEYLGGCV 278 HP+ H L + G++IVD + HRG EK+ E + + + +RI + GC Sbjct: 167 HPTLHEPEYFELYVKGDKIVDAKYRGFHIHRGMEKLAESRMTLNQVPFLAERICGICGCT 226 Query: 279 NEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTD 338 + Y AVE I VP+R IR ++ E+ R++SHLL+ +G + + Sbjct: 227 HSTAYCQAVEDATNIYVPERARYIRTIMLEVERLHSHLLWFGVACHLLGFDSGFMHLWRA 286 Query: 339 RQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNT 398 R+ I D+ E ITG R IGGV D+P R + E LD K ++ Sbjct: 287 REYIMDIAELITGNRKTYGINLIGGVRRDIPEEKKRKVLELLDLAEKDSREILDNVVKMG 346 Query: 399 ILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSD 458 LK R + V K+ E G G RA+GID DVR+ PY+ Y + DFE+PV G D Sbjct: 347 ELKERMENVGVLPKKKGREIGVVGPVARASGIDTDVRRDHPYAAYGDLDFEVPVYKGE-D 405 Query: 459 CYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQV 518 +R +++ +E QS ++ Q L+NMPEG + I F Sbjct: 406 VLSRFLVRYDETFQSFSMIRQALDNMPEGELINED----------------YEIPGFKL- 448 Query: 519 SWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVS 578 + EA +G + + + + G YR R ++ +L +P +RG+ ++ Sbjct: 449 ----------GLGVTEAPRGEDVHVVITWGENKVYRWHPRASTYNNLPAVPVMLRGNDIA 498 Query: 579 DLIVYLGSIDFVMSDVD 595 D + + SID S D Sbjct: 499 DAPIIIASIDPCFSCTD 515 >UniRef50_Q5LH50 NADH-quinone oxidoreductase subunit C/D n=34 Tax=Bacteroidetes RepID=NUOCD_BACFN Length = 530 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 162/558 (29%), Positives = 263/558 (47%), Gaps = 33/558 (5%) Query: 43 VPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE-RLRTHREGLPAADFSVFYHLISI 101 + +I+ L + L+ K L L GMD V YHL S Sbjct: 2 EEIKYIEPAALHDEMLRLRN-EKQMDFLESLTGMDWGVADEGDAPNVTRGLGVVYHLEST 60 Query: 102 DRNRDIMLKVALA-ENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW 160 I +K + +P+ + ++ A++ ERE +D +GI F GHP++RR+ + W Sbjct: 61 VTGERIAIKTSTNNRETPEIPSVSDIWKAADFNEREVFDYYGIVFIGHPDMRRLYLRNDW 120 Query: 161 KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTE--NEDFMFLNLGP 218 GHP+RKD + +P + + + P+ + ++ +N+GP Sbjct: 121 VGHPMRKD--NNPEKDNPLRMDNEETYDTTREIELNPDGTYQTQENVIFDDREYVVNIGP 178 Query: 219 NHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCV 278 HP+ HG R + L+GE I + GY HRG EKM E ++ + TDR++YLG Sbjct: 179 QHPATHGVMRFRVSLEGETIKKLDANCGYIHRGIEKMNESLTYPQTLALTDRLDYLGAHQ 238 Query: 279 NEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTD 338 N + +EK GI V +RV IR ++ EL RI+SHLL+ S D+GA+T F+ F D Sbjct: 239 NRHALCMCIEKAMGIEVSERVKYIRTIMDELQRIDSHLLFYSCLAMDLGALTAFFYGFRD 298 Query: 339 RQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNT 398 R+ I D+ E G R+ + IGGV DL + +++F+ ++ + Y N Sbjct: 299 REMILDMFEETCGGRLIMNYNTIGGVQADLHPNFIPRVKKFIPYLRGIIHEYHDVFTGNV 358 Query: 399 ILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSD 458 I + R +GV ++A+ +G TG RA+G DVRK PY Y+ DF+ V D Sbjct: 359 IARQRLKGVGVLSREDAISFGCTGGTGRASGWACDVRKRMPYGVYDKVDFKEIVYTE-GD 417 Query: 459 CYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQV 518 + R M++++E+ +SL I+EQ ++N+PEGP + Sbjct: 418 SFARYMVRMDEIMESLNIIEQLIDNIPEGPIQEKMKPII--------------------- 456 Query: 519 SWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVS 578 +P + +E ++G +L S G YR R+ + + RG+ ++ Sbjct: 457 ----RVPEGSYYTAVEGSRGEFGVFLESHGDKTPYRLHYRSTGLPLVSAVDTICRGAKIA 512 Query: 579 DLIVYLGSIDFVMSDVDR 596 DLI G++D+V+ D+DR Sbjct: 513 DLIAIGGTLDYVVPDIDR 530 >UniRef50_A1RWL3 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=2 Tax=Archaea RepID=A1RWL3_THEPD Length = 567 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 150/583 (25%), Positives = 248/583 (42%), Gaps = 65/583 (11%) Query: 23 GELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRT 82 ++R G V+ ++++R +L EV ++ + L + G DER Sbjct: 10 EKIRKEIGGLLLGVEKPYPDQLYLYVERTKLPEVCSYVYYELGGF--LSTMAGSDERSL- 66 Query: 83 HREGLPAADFSVFYHLISIDRNRD------IMLKVALAENDLHVPTFTKLFPNANWYERE 136 Y++ SI+ + +++ + +D + T P A+WYERE Sbjct: 67 -------HGAYRLYYVFSIEEGYEDGKKPWVVVVTNIPPHDTKFSSVTPKIPAASWYERE 119 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALT 194 DL G+ + HP+ RR+++P W HPLRK++ TE P K + Sbjct: 120 VRDLLGLVPENHPDPRRLVLPDDWPEGVHPLRKEF--TYTERPPSVARKCE--------- 168 Query: 195 FKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEK 254 + E E M + +GP H A + + LDGE++VD + Y HRG EK Sbjct: 169 -------FRPSVEGEGIMQVPIGPVHAVADEPGQFRVFLDGEKVVDVDYRMFYVHRGIEK 221 Query: 255 MGERQ-SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRIN 313 + E + +++ +RI + G + Y AVE+ GI VP+R IR ++ E+ R++ Sbjct: 222 LAESRLTYNQVPFIAERICGICGYAHSCAYCQAVEQALGIEVPERALYIRTLMLEVERLH 281 Query: 314 SHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWD 373 SHLL + G F R+K+ + E +TG R +GGV D+ Sbjct: 282 SHLLNLGLACHLAGFDWGFMAFFKAREKVMYMAELLTGGRKTYGMNVVGGVRRDITEDRA 341 Query: 374 RLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFD 433 + E L + K + A L + L R++ V A + G R + I D Sbjct: 342 KKALEILKEVEKEYKAVLDAVLSTSTLVSRAKDVGVLPRDVARKVSVVGPVARGSSIKRD 401 Query: 434 VRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH 493 RK PY+ Y DF++PV D R+ ++ EE +++ I+ Q L NMP GP +A+ Sbjct: 402 TRKDHPYAAYSEVDFKVPV-HSEGDVLARLSVRAEETFETISIIRQVLENMPGGPIQAEV 460 Query: 494 PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSY 553 P +EA +G + +++ + + Y Sbjct: 461 KEYR---------------------------PYARGLGYVEAPRGEDVHFVITGPHSKVY 493 Query: 554 RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R RVR ++ + IP RG ++DL + +GSID S +R Sbjct: 494 RWRVRASTYNNWPAIPYMCRGYTLADLPLIIGSIDPCYSCTER 536 >UniRef50_C9LCY9 NADH dehydrogenase I, C/D subunit n=9 Tax=Bacteroidales RepID=C9LCY9_9BACT Length = 558 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 167/552 (30%), Positives = 263/552 (47%), Gaps = 40/552 (7%) Query: 47 WIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRD 106 ++ E L LK + L L GMD V Y+L S +N+ Sbjct: 45 YLAPEDLHAEMQRLKDEEH-FDFLETLTGMDWG---------EDGLGVVYNLWSTTQNKR 94 Query: 107 IMLKV-ALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPL 165 I LK + +PT + L+ AN YERE +D FGI F GHP++RRI + + W G+P+ Sbjct: 95 ISLKTATTDRENPFLPTVSDLWNIANIYEREVFDFFGIKFLGHPDMRRIFLREDWNGYPM 154 Query: 166 RKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTEN-EDFMFLNLGPNHPSAH 224 RKD + E +P + K T ED +N+GP HPS H Sbjct: 155 RKD--DKPEEENPLRMDNEPLADVTTQYDRPDGSITTKENTIFTEDDYVVNIGPQHPSTH 212 Query: 225 GAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYV 284 G + L+GE I P +GY HRG EK+ E ++ + T+R++YLG N Sbjct: 213 GVLHFRVALEGERIRKIDPILGYIHRGIEKLNESLTYPQTLALTERLDYLGAMQNRHALC 272 Query: 285 LAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYD 344 + +EK AGI V +RV IR ++ E RI+SH+L+ S QD+GA + + F DR++I D Sbjct: 273 MCIEKAAGIEVSERVQYIRTIMDEFQRIDSHILFFSCLCQDMGATSAFLYGFRDREQILD 332 Query: 345 LVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRS 404 + E G R+ + IGGV D+ + R ++EF+ +M L Y + N I R Sbjct: 333 IFEETCGGRLILNYNTIGGVMADIHPNFVRRVKEFIPYMRHNLQEYYDIFVNNVIAHNRL 392 Query: 405 QGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVM 464 +GV ++ + +G TG RA G D+RK +PY+ Y+ DF+ D + R+M Sbjct: 393 EGVGVLNKEQVISFGCTGGTGRAAGWSNDLRKHQPYAAYDKVDFQEITYTE-GDSFARLM 451 Query: 465 LKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVM 524 ++++E+ +SL+I+EQ ++ +PEGPF+ + Sbjct: 452 VRMKEIEESLKIIEQLIDGIPEGPFQTKTKPII-------------------------KI 486 Query: 525 PANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYL 584 PA + +E ++G L S G R R+ + + R + ++DL+ Sbjct: 487 PAGTYYSAVEGSRGEFGVLLESKGDKFPSRLHYRSTGLPLVAAMDTICRDNFIADLMAIG 546 Query: 585 GSIDFVMSDVDR 596 G++D+V+ D+DR Sbjct: 547 GTVDYVVPDIDR 558 >UniRef50_B5YKR2 Hydrogenase-4 component G n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKR2_THEYD Length = 541 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 145/568 (25%), Positives = 252/568 (44%), Gaps = 61/568 (10%) Query: 32 DAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAAD 91 + T +V+ K Q+ EV L + L + ++++ + Sbjct: 10 NITDKVETTDENLIVYSKPSQIKEVAKLLVMQGARFAHLTAIDFINQKNQ---------- 59 Query: 92 FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL 151 + Y ID + ++++K+ L ++L + + +++ P W ERE DLFGI F+GHP+ Sbjct: 60 IELNYFFSLIDDSMNVIVKIPLEASELSISSISEIIPAVIWSERECNDLFGINFEGHPDP 119 Query: 152 RRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENE 209 RR+++P W HPLRK++ + + K+ E + + Sbjct: 120 RRLVLPDNWPQEVHPLRKNFSYNSKPPESKQPAPLKKPEEGKTV---------------- 163 Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER-QSWHSYIPYT 268 + +GP +PS L +DGEEI D Y HRG EK+ E ++ Sbjct: 164 ----IPIGPFYPSLEEPAYFRLIVDGEEIADFDYRGFYVHRGIEKLAESVLNYQQIPFLA 219 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +RI + G V+ Y AVEK AGI +P R IR + EL R++SHLL++ VG Sbjct: 220 ERICGICGFVHSCAYCQAVEKAAGIEIPLRAKFIRSLFLELERLHSHLLWVGLAAHIVGF 279 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T A+ R+ + + E ITG R +GGV D+ + + + + + K + Sbjct: 280 DTLFMQAWRIREPVMYICEIITGNRKTYGINIVGGVTIDVHNQHLKDIDKVISQIEKEVR 339 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 + L + +++ R + V +A ++ G R +GI+ D+R PY+ Y + Sbjct: 340 ELREIILDDEVIQLRFKNVGVLKYDDAKKYCVCGPVARGSGINIDMRTNFPYAAYPMLNI 399 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 IP+ D + R ++++EE+ S+ I+ Q L N+PEGP Sbjct: 400 RIPL-NKSGDVWARTIVRLEEILISINIIRQILENIPEGP-------------------- 438 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI 568 + + P E+ IEA +G +Y+ + YR VR PS+ + Q + Sbjct: 439 -------TSIKISKIEPWKEAVSYIEAPRGQLFHYVMTGPEGRPYRWSVRAPSYQNYQAL 491 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++G+ ++D + +GSID S +R Sbjct: 492 SVMLKGASIADAPLIIGSIDPCFSCTER 519 >UniRef50_Q1PZL4 Similar to membrane-bound [NiFe]-hydrogenase-3, large subunit (Chain E) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZL4_9BACT Length = 531 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 139/576 (24%), Positives = 234/576 (40%), Gaps = 57/576 (9%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLR 81 I +L +F + ++ V K+E LL V ++K + +L + DER Sbjct: 10 IDKLSGQFKGNITISRSFLENEIYVSTKKENLLNVCLYIKDIFN--AVLSSMICNDERTL 67 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 F ++Y + +++ + ++E P+ T P A+WYERE D+F Sbjct: 68 D-------KHFKIYYVFSLQREDTFLIVTIPVSEQQPEFPSITPQIPAAHWYEREIKDMF 120 Query: 142 GITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEE 199 G+ GHP +++ + +PLRKD+ + LE + F Sbjct: 121 GLIPVGHPRPETLVLHGNFPENTYPLRKDFDIQT----------RIPHLESKLPFF---- 166 Query: 200 WGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ 259 E E + +GP H G+ I + + H+G EK+ E Sbjct: 167 -----RVEGEGVFEIPVGPIHAGVIEPGHFRFSAVGDSIFYLDAKLFFTHKGTEKIFETM 221 Query: 260 SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYI 319 + + +RI + + Y A+EK+A I +P R IR ++ EL RI +H+ + Sbjct: 222 PYTKALFLAERICGVCAASHATGYCQAIEKVAEIEIPPRARFIRTIVMELERIYNHIGDV 281 Query: 320 STFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREF 379 + + F R+ + L E ITG R IGGV D+ ++ + Sbjct: 282 GNICAGTAFLLGIAHGFRIREYLQQLNETITGNRYLRGMLAIGGVRFDINDDLEKHILSL 341 Query: 380 LDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARP 439 L+ + K K +++ L R + + A G G RA+GI D R P Sbjct: 342 LNHVKKDFKDLTKMMFKSSSLLDRLETTGRLSEEIARGLGVVGVAARASGIVQDTRVNHP 401 Query: 440 YSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 Y+ YE DF+IPV D R+ ++V+E+ QS+ I+EQC M GP K Sbjct: 402 YAAYEEVDFDIPVFHYEGDVLARIRVRVDEVYQSIYIIEQCFEKMRPGPLKT-------- 453 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 + P ++ +E+ +G N Y++ + +R +VR+ Sbjct: 454 -------------------PIKELPPYKQALSYVESPRGENIYWIMTAPGNKLFRYKVRS 494 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 PSF + IP A+ G++V D + S + S D Sbjct: 495 PSFCNWPAIPFAVPGNIVPDFPLINKSFELCYSCTD 530 >UniRef50_C5A3D4 Formate hydrogenlyase I subunit F (Mhy1F) n=2 Tax=Thermococcus RepID=C5A3D4_THEGJ Length = 601 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 150/582 (25%), Positives = 241/582 (41%), Gaps = 57/582 (9%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERL 80 + E F + G + I RE L + + P+ L G DER Sbjct: 40 LKEFYEAFKEHIRECKRMTYGQYMFVIDREVLPDAVLWWHNHPEFKETHLSTAVGTDERP 99 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 + +V ++D N + LK + +D P+ P A W ERE DL Sbjct: 100 LNGKFVY-MPFLNVQVEPQNMDENYWVFLKAYMPADDPSFPSVAAKLPAALWIEREVKDL 158 Query: 141 FGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 G GHP+ RR+++P+ W +PLRKD R + + + + Sbjct: 159 LGFNPVGHPDPRRLILPEDWPEGVYPLRKDMDYRHSPMAEVKTEYRETP----------- 207 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 E + +GP H L + GEEIVD Y HRG EK GE Sbjct: 208 ----------EGTTLVPMGPVHAGIEEPAHFRLFVKGEEIVDVDYRGFYSHRGIEKTGEG 257 Query: 259 Q-SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 + +++ + +RI + G + + Y +AVE+LA + +PDR IR ++ EL RI++HLL Sbjct: 258 RLTYNQVLFLAERICGICGYQHSVSYAMAVERLADVDIPDRARYIRTLMLELERIHNHLL 317 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 ++ VG T A+ R+ + LVE +TG R +GGV D+ + Sbjct: 318 WVGIAAHLVGYDTGFMHAWRIREPVMWLVERLTGNRKQYGMNIVGGVRRDILDYRKEEIL 377 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 + + + + + AL R++GV K A + G RA+G D R Sbjct: 378 KVVKQIREETKKFLDIALNTNTFIKRAEGVGILPYKVAKAYSVLGPTARASGRRIDTRLD 437 Query: 438 RPY---SGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHP 494 + Y DF++PV D RV+++++EL +SL I+EQ ++ MP G Sbjct: 438 QATKTAMAYNEVDFKVPVYKE-GDVLARVLVRMDELFESLWIVEQLIDQMPGGDIM---- 492 Query: 495 LTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYR 554 V G + E+ EA +G +Y+ + YR Sbjct: 493 -----------------------VPIGDLPEYEEALGFTEAHRGEVVHYVMTGEKNKVYR 529 Query: 555 TRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +VR P++ +L +P ++G V+D + + SID S +R Sbjct: 530 WKVRAPTYNNLPAVPEMLKGYHVADAPLIIASIDPCYSCTER 571 >UniRef50_Q0W2B9 Hydrogenase, large subunit-like protein (HycE-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B9_UNCMA Length = 524 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 139/579 (24%), Positives = 241/579 (41%), Gaps = 61/579 (10%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 + E+ FG + + + V V ++ L V F+ K + L LH D Sbjct: 4 KNITNEITAAFGEEMASARDVGNNV-FVRAGKDALPYVASFVAK--RYGASLATLHVADT 60 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R T ++++ + N + ++ + E+ + T + +ANW+ERE Sbjct: 61 RQMT-------GGYTMYAVMPVASENLIVSIEAEVPESPGTFQSLTPMIYSANWFEREIA 113 Query: 139 DLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 D+FG+T GHP+LR +++ TW HPLRKD P R + + Sbjct: 114 DMFGLTPVGHPDLRPLVLYDTWPEDYHPLRKDAPGRPPKVDTY----------------- 156 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 E E + +GP H + GE ++ +GY H+G EK+ Sbjct: 157 ----YPYHRVEGEGVFEIPVGPVHAGVIEPGHFRFSVAGEPVLMLEIRMGYVHKGIEKIS 212 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 E ++ + ++R G + Y AVE+LAGI VPDR IR + E+ RI +HL Sbjct: 213 ESMTYDKGVFLSERTSGDNGMAHSTAYCQAVEQLAGIEVPDRARYIRTVFLEMERIYNHL 272 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 + D A+ R+++ L E ITG R+ + +IGGV DL R + Sbjct: 273 GDVGGISLDTAYNVGAQHAYILRERMLQLNECITGSRLLRSVNKIGGVRQDLTREDIEKI 332 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 R + + + T + R++ + A+ G G RA+G+ DVR+ Sbjct: 333 RTAIIKAKLDFKDFVDLVNRQTSILDRTETTGKLPLEAAVSLNIVGPGARASGVSRDVRR 392 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 PY+ Y + +F + + D R+ +K+ E+ +S+ I+EQ L+ +P G +A Sbjct: 393 DHPYAAYSDLNFAVHI-RKEGDVNARMQVKIGEIYESMSIIEQALDRLPAGKIRA----- 446 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 + G + ++EA +G +++ S + +R + Sbjct: 447 ----------------------ATGNIPQGRVGISLVEAPRGELLHWILSGENDRPFRHK 484 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +R PSF + + A G++V D + S + S D Sbjct: 485 IRDPSFCNWLAMEIATPGNIVPDFPLVNKSFNLSYSGND 523 >UniRef50_Q2RXM4 NADH-ubiquinone oxidoreductase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM4_RHORT Length = 561 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 140/581 (24%), Positives = 241/581 (41%), Gaps = 56/581 (9%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 ++ ++ RF A + + E + + ++ K + + G+ Sbjct: 5 QTILDDINARFPGCVTRGLAPQPDRLYLRTTTEHIRTLAAYVFNDLKGRL----VTGV-- 58 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 G ++ + Y + L D VPT T L P A+W+ERE + Sbjct: 59 ---CTDMGPVTGEYDIIYAFSLDAEGILLTLTEPTDPKDPKVPTLTDLIPGADWHERENY 115 Query: 139 DLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 D+ G+ +GHPN RR+++ + W P+RKD+P +F P + K L Sbjct: 116 DMLGVVAEGHPNPRRLLLSEDWPEDLFPMRKDFPH---DFKPPKAEKITTPLR------- 165 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 +++GP P+ L +GEEI+ + HRG EK+ Sbjct: 166 ------DPLGNESKATIISVGPFFPTLDEPAYFRLFCEGEEIIGSDYRGFFSHRGIEKLS 219 Query: 257 ER-QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH 315 + ++ +R+ + G V+ Y +AVE AGI +P R IR ++ EL R++SH Sbjct: 220 DTVLDYNQVPFMAERVCGICGFVHSACYCMAVEDAAGIEIPPRAKYIRSIMMELERLHSH 279 Query: 316 LLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL 375 LL++ +G T + ++ R+ I LVE ITG R +GGV DL Sbjct: 280 LLWLGLAGHYLGFDTVLMQSWRIREPIMWLVEEITGNRKTYGMNLVGGVRRDLDSAICDK 339 Query: 376 LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR 435 + + + A + LK R V ++A G RA+G+ D R Sbjct: 340 IMAAVTKIGIECEELISAVAGDESLKMRMVKVGVLSHEDARGICVVGPTARASGVHIDAR 399 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPL 495 PY+ + + DF+ P D + R +++V+E+R S+ +++Q + +PEG A Sbjct: 400 ADYPYAAFPDLDFK-PSFHEGGDIWARTLVRVDEVRSSVDLIKQMITKLPEGEIMA---- 454 Query: 496 TTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT 555 +GP+ E + + EA +G +Y+ + YR Sbjct: 455 -----------------------GFGPIPAWREGYGIAEAPRGECVHYVQTGKDNRPYRW 491 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 RVR ++ LQ +P ++G + D + +GSID S +R Sbjct: 492 RVRAATYPQLQAVPLMLKGMSIGDFPIIIGSIDPCFSCTER 532 >UniRef50_B0R3U3 NADH dehydrogenase-like complex subunit CD n=16 Tax=Halobacteriaceae RepID=B0R3U3_HALS3 Length = 562 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 173/578 (29%), Positives = 281/578 (48%), Gaps = 52/578 (8%) Query: 27 NRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREG 86 D + P I+ + + +V LK + L + + Sbjct: 29 EALIEDHVLEREDHLNAPGFVIRADAVQDVLSTLK-TEAGFDHLSCVTAEEH-------- 79 Query: 87 LPAADFSVFYHLISIDRN-RDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITF 145 F YHL D +++ + V + ++ T +F A+W+ERE +DL G+ + Sbjct: 80 --EDRFESIYHLRKYDDPTQEVSIIVPTSRDNPVSETAEPVFRTADWHEREAYDLVGVEY 137 Query: 146 DGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRG 205 D HPNL RI++P TW+GHPL DY + F+ K G ++ Sbjct: 138 DDHPNLERILLPDTWQGHPLGLDYNQNKPQIVTFDEHK-------------NPLEGHEQA 184 Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW-HSY 264 ++ D MFLN+GP+HP+ HG + LDGE++ D PDIGY HR E+M ++ ++ H Sbjct: 185 ADDSDTMFLNIGPHHPATHGVLHVETVLDGEQVADVNPDIGYLHRCEEQMAQKGTYRHQI 244 Query: 265 IPYTDRIEY-LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI 323 +PY DR +Y GG +NE Y E LA I VP+ ++R M EL RI H+L + TF Sbjct: 245 MPYPDRWDYGPGGILNEWAYARTAEDLADIDVPEYAQILRTMGGELCRIACHMLALGTFC 304 Query: 324 QDV-GAMTP-VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPR---GWDRLLRE 378 D+ G T +A DR+ + +++E +TG RM + R+GGV D+P + +R+ Sbjct: 305 LDIYGDFTAIFMYAMRDREVVQNILEDLTGQRMMLNYLRLGGVVWDIPEPRAEFFESVRD 364 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 FLD +P+RL Y N I + R+ + A ++G TG R +G+D+DVR+ Sbjct: 365 FLDELPERLDEYSDLITSNEIFQARTVNTGVLDYETAKDYGVTGPVARGSGVDYDVRRDD 424 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY Y D+++ V D Y+R+++++EE+ QS RI+EQC++ + P Sbjct: 425 PYGYYPELDWDV-VTEDGGDNYSRLLVRMEEVEQSARIIEQCVDLLEGWPEDERDIQANV 483 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 P + E+++ +E KG Y+ +DG+ R ++R Sbjct: 484 PRTLKPEAGT-------------------ETYRTVEGAKGELGVYIRADGTEKPGRFKIR 524 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P F++L + G + DL+ LGS+D ++ +VDR Sbjct: 525 SPCFSNLSALKEMSTGEYIPDLVATLGSLDVILGEVDR 562 >UniRef50_O75306 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial n=570 Tax=cellular organisms RepID=NDUS2_HUMAN Length = 463 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 163/435 (37%), Positives = 243/435 (55%), Gaps = 3/435 (0%) Query: 164 PLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDF--MFLNLGPNHP 221 P R + + A E +KP W ++ + LN GP HP Sbjct: 30 PSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKDTIVKNITLNFGPQHP 89 Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEM 281 +AHG R+V++L GE + C P IG HRG EK+ E +++ +PY DR++Y+ NE Sbjct: 90 AAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQ 149 Query: 282 PYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQK 341 Y LAVEKL I P R IRV+ E+ R+ +H++ ++T D+GAMTP F+ F +R+K Sbjct: 150 AYSLAVEKLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREK 209 Query: 342 IYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILK 401 +++ E ++G RMH A+ R GGV DLP G + +F RL E+ N I + Sbjct: 210 MFEFYERVSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWR 269 Query: 402 GRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYT 461 R+ + A+EAL +G +G LR +GI +D+RK +PY Y+ +F++PVG DCY Sbjct: 270 NRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSR-GDCYD 328 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWG 521 R + +VEE+RQSLRI+ QCLN MP G K D +PP + +E+LI HF + G Sbjct: 329 RYLCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEG 388 Query: 522 PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLI 581 +P ++ IEA KG YL SDGS+ YR +++ P FAHL + +G +++D++ Sbjct: 389 YQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVV 448 Query: 582 VYLGSIDFVMSDVDR 596 +G+ D V +VDR Sbjct: 449 AIIGTQDIVFGEVDR 463 >UniRef50_Q2K3U2 NADH-quinone oxidoreductase subunit D 2 n=7 Tax=Proteobacteria RepID=NUOD2_RHIEC Length = 404 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 167/396 (42%), Positives = 241/396 (60%), Gaps = 2/396 (0%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 + N + LNLGP HPS HG R+VL+LDGE + P IGY HRG EK+ E ++ Sbjct: 10 PEGEALNTREVLLNLGPQHPSTHGVLRLVLELDGEFVERVDPHIGYLHRGTEKLAESFTY 69 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 P TDR++YL N + + LAVEKL GI P R IRVM++EL RI+ HLL Sbjct: 70 TQIFPLTDRLDYLCPPSNNLAFALAVEKLLGIEAPIRAQYIRVMMAELARISGHLLITGA 129 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 D+GAMT + + +R+ I DL+E ITG RMH ++ R+GGV DLP G+ +REF D Sbjct: 130 LPMDLGAMTALLYVMREREMIMDLLEMITGARMHTSFCRVGGVREDLPDGFFPKIREFCD 189 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 P R+ YE+ N + R++G+ A++A++ G +G LRA+G+D+D+R+ PY Sbjct: 190 IFPNRIRDYERLLEDNRVFLNRTKGIGVISAEDAVDLGLSGPNLRASGVDWDIRRDEPYE 249 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHP-LTTPPP 500 Y+ DF + + DCY R +V+E+R+S+RI+EQC++ MPEGPF+ D P + P Sbjct: 250 IYDRLDFNV-ITRDEGDCYARWRCRVDEMRESMRIIEQCIDQMPEGPFQIDMPTIAFPLD 308 Query: 501 KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP 560 K+R +E LI HF ++G +P E + IEA KG +Y+ SDGS +R +VR P Sbjct: 309 KDRVHCSMEALIQHFDLSAYGFKVPKGEVYSAIEAPKGELGFYIISDGSPKPFRMKVRAP 368 Query: 561 SFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SF +LQ + ++D+I LGS+D VM++VD+ Sbjct: 369 SFVNLQALFGVTNARYLADMIAVLGSLDPVMAEVDK 404 >UniRef50_A1RZ40 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ40_THEPD Length = 537 Score = 504 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 150/554 (27%), Positives = 250/554 (45%), Gaps = 55/554 (9%) Query: 46 VWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNR 105 V + E + E + + + Y L + +D + YH R Sbjct: 10 VQVPPEGIREAVR--RLVAEGYAHLTAITAVDL----------QDSIELIYHFDGGGGYR 57 Query: 106 DIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--- 162 + +K L + +P+ ++ P A++YE+E DLFG+ F RR ++P+ + Sbjct: 58 HVSVK--LPRANPTLPSIAQVVPGADYYEKEVRDLFGVNFQDGAEKRRFILPECYPPDAP 115 Query: 163 HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS 222 PL KD + + L EA T + + G+ E + + +GP HP+ Sbjct: 116 PPLLKDVDPASVK-----------ALVAEAPTCQVDAVGLHAPLSPESVV-VPVGPYHPA 163 Query: 223 AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMP 282 L +DGE IV IG+ HRG EK E +S+ I +RI + + Sbjct: 164 FKEPEYFSLVVDGERIVKAFVRIGFVHRGIEKAAESRSFFRDIFLVERICGICSTSHAWC 223 Query: 283 YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKI 342 +V AVE+L + VP R +R +++EL RI+SH L++ G T + + R+ I Sbjct: 224 FVEAVERLLNMEVPRRAAYLRTLVAELERIHSHALWLGLVGYWTGFETMFMWVWGLRETI 283 Query: 343 YDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKG 402 DL+E I+G R+H ++ IGGV D+P R + E ++ + S ++ + + Sbjct: 284 MDLLEEISGNRVHKSFVTIGGVRRDVPDALLRRVSERVETFRREFESLLESLSYSEEIIS 343 Query: 403 RSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTR 462 R++G+ Y +A ++ G RA G FDVR+ PY Y +FE+P D Y Sbjct: 344 RTKGIGRYSLDDARKYCAVGPVRRAAGDPFDVRRIEPYGAYPEVEFEVPTS-NEGDVYNL 402 Query: 463 VMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGP 522 + ++V+E+ +S I++Q + MP G PPK Sbjct: 403 IRVRVKEVVESASIIQQLVEKMPSG--------NPVPPKPFMGT---------------- 438 Query: 523 VMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIV 582 +P E++ IEA +G YY+ ++ + YR +VRTP+ A++Q + G +SD V Sbjct: 439 -VPEGEAYSRIEAPRGELFYYVKANNTHNPYRVKVRTPTLANIQLAAKILEGQTLSDFPV 497 Query: 583 YLGSIDFVMSDVDR 596 + SID S +DR Sbjct: 498 VVTSIDPCFSCMDR 511 >UniRef50_P16431 Formate hydrogenlyase subunit 5 n=104 Tax=Bacteria RepID=HYCE_ECOLI Length = 569 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 141/587 (24%), Positives = 239/587 (40%), Gaps = 58/587 (9%) Query: 15 DHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLH 74 + L + L F V +K L EV +FL + L L Sbjct: 4 EKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGW--LSVLF 61 Query: 75 GMDERLRTHREGLPAADFSVFYHLISIDRN--RDIMLKVALAENDLHVPTFTKLFPNANW 132 G DER Y+++S+++ I ++V + N P+ T P A W Sbjct: 62 GNDERKL--------NGHYAVYYVLSMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVW 113 Query: 133 YERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEM 190 ERE D++G+ G P+ RR+++P W +PLRKD +P + Sbjct: 114 GEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTT--------DA 165 Query: 191 EALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHR 250 E F E K + +GP H ++ L +DGE I+D + Y HR Sbjct: 166 ETYEFINELGDKKNNV-------VPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR 218 Query: 251 GAEKMGERQS-WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSEL 309 G EK+ E + ++ +DR+ + G + Y +VE GI VP+R +IR +L E+ Sbjct: 219 GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEV 278 Query: 310 FRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP 369 R++SHLL + G + F R+ + E +TG R IGG+ DL Sbjct: 279 ERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLL 338 Query: 370 RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATG 429 + R+ M + + L ++ R+ G+ + A ++ G +RA+G Sbjct: 339 KDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASG 398 Query: 430 IDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPF 489 D R P+ GY E+ G D +R+ +++ E+ +L +++ L+N+P GP Sbjct: 399 HARDTRADHPFVGYGLLPMEVHSEQG-CDVISRLKVRINEVYTALNMIDYGLDNLPGGPL 457 Query: 490 KADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS 549 + +P + EA +G + ++ + + Sbjct: 458 MVEGFTY---------------------------IPHRFALGFAEAPRGDDIHWSMTGDN 490 Query: 550 TMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR R R ++A+ + +RG+ VSD + +GS+D S DR Sbjct: 491 QKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537 >UniRef50_A3DNE9 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=2 Tax=Desulfurococcaceae RepID=A3DNE9_STAMF Length = 548 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 137/582 (23%), Positives = 248/582 (42%), Gaps = 67/582 (11%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 D V + + G + ++ I R L + D + Y + +DE Sbjct: 6 DSVRQHIIEKLGDIVKETKYIGDQALMLRIDRNYLRKAVDIIHNDLNAYFR--TMVAVDE 63 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R F+ +Y + +I++K + ++ +P+ + P A+WYE E W Sbjct: 64 RSLN-------GTFASYYIFGLDAAHLNIIVKTHTSADEPVLPSIIDIVPAADWYELEAW 116 Query: 139 DLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 DL GI F+ + R ++P W +PLRKD + + Sbjct: 117 DLLGIKFENR-KVHRFVLPDEWPEGIYPLRKD------------------------VEYT 151 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 K + + +GP HP+ H L ++GE++VD + + HRG EK+ Sbjct: 152 YRPKPRKVPRQPPTGQRIPIGPYHPALHEPEYFELYVEGEKVVDVEYNGFHVHRGIEKLA 211 Query: 257 E--RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINS 314 E R ++ +RI + G V+ + Y ++VE+ A I VP+R IR ++ E+ R++S Sbjct: 212 EAPRFNYQKIPFLAERICGICGFVHSVSYTMSVERAAKIDVPERAEYIRSIILEIERLHS 271 Query: 315 HLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDR 374 HLL+I +G + R+K+ L E +TG R +GGV D+ Sbjct: 272 HLLWIGVVCHLLGYDAGFMHTWRIREKVMVLAELLTGSRKTYGINLVGGVRKDINMDKIE 331 Query: 375 LLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDV 434 ++ ++++ + + R+ G +A + G R +G+D DV Sbjct: 332 AVKNTIEYIRSEFKHLSDLITSISQIVKRASGTGILSRDDARKLSVVGPVARGSGLDRDV 391 Query: 435 RKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHP 494 R+ PY+ Y + F++PV D R++++++E+ +S+ ILEQ ++ +P GP A+ Sbjct: 392 RRDYPYAAYRDVYFKVPVY-NEGDNLARLLVRIDEVFESIYILEQLIDKLPGGPIMAEK- 449 Query: 495 LTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYR 554 L+V G + +EA +G + +T G YR Sbjct: 450 ---------------------LEVPEGVI-----GIGNVEAPRGEVIH-VTITGHGRPYR 482 Query: 555 TRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 RVR P++ ++ + +R + ++D + + SID S DR Sbjct: 483 WRVRAPTYQNIPALKIMLRDAPLADAPLTIASIDPCFSCTDR 524 >UniRef50_A9B4Z7 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=Bacteria RepID=NUOD1_HERA2 Length = 422 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 155/420 (36%), Positives = 239/420 (56%), Gaps = 5/420 (1%) Query: 181 LTKAKQDLEMEALT-FKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIV 239 A D+E+ + + E M L++GP HPS HG R+ ++L+GE +V Sbjct: 4 HAHAYPDIEIPTPSQIAAVALNNEPDENGEQSMVLSMGPQHPSTHGVLRLAVELNGENVV 63 Query: 240 DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRV 299 PD+G+ H G EK E +++ I TDR++YL N M YV A+EKL VP+R Sbjct: 64 QLAPDVGFLHTGIEKTIETKTYTKSIVLTDRMDYLAPMSNNMVYVAAIEKLMQQDVPERA 123 Query: 300 NVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWF 359 +RV+L EL RINSHL+++ T D+ AM+ F+A +R+ I D+ E +TG RM ++F Sbjct: 124 QTLRVLLLELTRINSHLVWLGTHALDLAAMSVFFYAMREREYILDIFEMLTGARMMTSYF 183 Query: 360 RIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWG 419 R+GG+A D+P + + +FL ++ YE N + K R++GV A +A+ G Sbjct: 184 RVGGLAWDIPADFIPTVEDFLTHFLPKVDEYEDLLTNNLLWKQRTKGVGVVNAADAIALG 243 Query: 420 TTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQ 479 +GA LRA+G+D+D+RK PYSGYE + F++PVG D Y R +V+E+R+S++I Q Sbjct: 244 LSGANLRASGVDWDLRKTMPYSGYETYQFDVPVGQ-AGDIYDRYRCRVQEMRESVKIARQ 302 Query: 480 CLNN---MPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEAT 536 + M P+ ++ PPPK +E+LI HF + G P ++ IE+ Sbjct: 303 AIERVKQMHGQPYVTENRKVAPPPKSEITYSMESLIHHFKLWTEGFRPPRGSAYAAIESP 362 Query: 537 KGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +G Y+ SDG+ +R R PSF +LQ +P +G L++DL+ + SID V+ +VDR Sbjct: 363 RGEIGCYVVSDGTPKPWRVHFRAPSFINLQALPHIAKGKLMADLVALIASIDPVLGEVDR 422 >UniRef50_B1ZRT0 NADH-quinone oxidoreductase subunit D 1 n=16 Tax=Bacteria RepID=NUOD1_OPITP Length = 426 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 170/420 (40%), Positives = 246/420 (58%), Gaps = 2/420 (0%) Query: 178 PFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEE 237 P + + T + G + D M L++GP+HPS HG RI ++L+GE Sbjct: 8 PDSAARIATAQQAGGGTPVRSGPPDEGGEFSGDRMSLSMGPSHPSTHGVLRIQMELEGEI 67 Query: 238 IVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPD 297 + P IGY HRG EK+ E +++ ++PYTDR++YL N M YV+AVEKLAG+TVP Sbjct: 68 LTKADPIIGYLHRGDEKIAENMTYNQFVPYTDRLDYLAPLANNMAYVIAVEKLAGLTVPP 127 Query: 298 RVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPA 357 R IRV+ +EL RI+SHL+ + F DVGA T + + R+ +Y+L E +TG R + Sbjct: 128 RCQAIRVITAELARISSHLMGLGAFGLDVGAWTVLVLSLNQREFLYNLFEDLTGARFTTS 187 Query: 358 WFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALE 417 + RIGGV D+P GW + F D L +N I R+ GV ++A+ Sbjct: 188 YTRIGGVTRDVPPGWLENVGTFCDKFLPALEEILSLLTRNKIFLDRTVGVGVISKEDAIA 247 Query: 418 WGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRIL 477 +G TG R +GI D+RK RPYSGYE ++F++PVG DCY R +++ EE+RQS+RI+ Sbjct: 248 YGITGPNARGSGIATDLRKDRPYSGYEQYEFDVPVGTK-GDCYDRYLVRGEEMRQSVRII 306 Query: 478 EQCLNNMPEGPFKA-DHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEAT 536 Q + N P G + A + PPK + L +E LI F+ V+ GP MPA E + E Sbjct: 307 RQVIKNFPGGDWYATEAKKVFLPPKGKVLSSMEELIQQFMLVTEGPQMPAGEVYFEAENP 366 Query: 537 KGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 KGI +Y+ S G + YR ++R+PSF +L +P +G L+SD++ LGS+DFVM + DR Sbjct: 367 KGILGFYIVSKGGGVPYRLKIRSPSFCNLSLVPKLCQGVLISDVVAILGSLDFVMGECDR 426 >UniRef50_Q4P4N9 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P4N9_USTMA Length = 498 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 168/465 (36%), Positives = 249/465 (53%), Gaps = 35/465 (7%) Query: 166 RKDYPARATEFSPF----ELTKAKQDLEMEALTFKPEEWGMKRGTENED----FMFLNLG 217 R+ A + +P + A +E L K ++ G +D +N G Sbjct: 35 RRSLATEAQDTTPSAKAAPTSPATSAFTVEELHDKSAHEILREGGSRKDRSLRHFTVNFG 94 Query: 218 PNHPSAHGAFRIVLQLDGEEIVDCV--------------------------PDIGYHHRG 251 P HP+AHG R++L+L+GEEI+ P +G HRG Sbjct: 95 PQHPAAHGVLRLILELNGEEILRTDLAICKANIADSIQSCLFWPSGVCILQPHVGLLHRG 154 Query: 252 AEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFR 311 EK+ E +++ +PY DR++Y+ NE+ Y AVEKL I VP+R IR M E+ R Sbjct: 155 TEKLIEYKTYTQALPYFDRLDYVSMMTNELCYSRAVEKLLNIEVPERAKWIRTMFGEITR 214 Query: 312 INSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRG 371 I +H + + + + DVG +TP +AF +R+K+ + E ++G R+H A+ R GGVA+DLP G Sbjct: 215 ILNHCMAVLSHVMDVGGLTPFLWAFEEREKLMEFYERVSGARLHAAYVRPGGVAYDLPPG 274 Query: 372 WDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGID 431 + ++ R+ E+ N I KGR+ G+ A+EAL++G +G LR +GI Sbjct: 275 LLDDIHKWATQFGSRVDEIEEVVTGNRIWKGRTIGIGKVTAQEALDYGFSGVMLRGSGIP 334 Query: 432 FDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKA 491 +D+RK PY Y+ +F++PVG DCY R + +VEE RQSLRI+EQCLN MP G K Sbjct: 335 WDIRKVAPYDAYDQVEFDVPVGKN-GDCYDRYLCRVEEFRQSLRIIEQCLNKMPAGQIKV 393 Query: 492 DHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM 551 D PPP+ + +E+LI HF S G +P E++ IEA KG YL SDG+ Sbjct: 394 DDHKLVPPPRATMKESMESLIHHFKLFSEGYAVPPGETYSAIEAPKGEMGVYLVSDGTNR 453 Query: 552 SYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR ++R P FAHL R + D++ +G++D V +VDR Sbjct: 454 PYRCKIRAPGFAHLAGADFMARHHYIPDMVAIIGTLDLVFGEVDR 498 >UniRef50_Q2S5J0 NADH-quinone oxidoreductase subunit D n=5 Tax=Bacteria RepID=NUOD_SALRD Length = 451 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 167/445 (37%), Positives = 253/445 (56%), Gaps = 17/445 (3%) Query: 168 DYPAR----ATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTEN-----------EDFM 212 D+P F P K + LE + + + + + E+ M Sbjct: 8 DFPGNDLGDQFRFWPKHNEKIYERLENKHAWLEEKRAAAQGDGKPPATQRSEVDPLENEM 67 Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 LN+GP HP+ HG R V+++DGE I V DIGY HRG EK+ E +++ ++PYTDR++ Sbjct: 68 ILNIGPQHPATHGVLRCVVKMDGETIEKSVLDIGYLHRGIEKLAEHKTYQEFMPYTDRMD 127 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 YL N + + LAVEKLA I VP+R IR+++SEL RI+SH L++ + D GA++ Sbjct: 128 YLSPYSNNVAWCLAVEKLADIEVPERAQWIRMIMSELARISSHCLWLGVGMMDAGAVSGF 187 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 + F +R++IY +++ + G R + RIGGVA+D ++R+F+D P R+A +E Sbjct: 188 VWTFQEREEIYSIMDEVAGARFTVSHSRIGGVANDFSPRAIEMIRDFVDTFPDRIAGWEG 247 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 +N I R++GV +EALE G TG LR +G+ +DVR+ PY Y+ DF IPV Sbjct: 248 LLNKNRIWVERNKGVGRVTKEEALELGLTGPNLRGSGVPYDVRRFEPYLKYDEVDFTIPV 307 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 DC R L+++E++QS+RI+EQCL+ M EGP ++D P KE +E +I Sbjct: 308 -REEGDCLARYFLRLDEMKQSVRIIEQCLDRMTEGPIRSDDAKEAYPSKEEVYYSMEGMI 366 Query: 513 THFLQVSWGPVMPAN-ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 F+ G V P S+ IE KG +YLTSDG+ +R R+ PSF +LQ + Sbjct: 367 HDFMYTDVGTVPPKGAHSYHAIEGPKGELGFYLTSDGTGRPWRVRINAPSFTNLQAMEHM 426 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 + G +V+D +V +GS+D VM + D+ Sbjct: 427 LEGEMVADTVVIIGSLDPVMGEADK 451 >UniRef50_A1ASR5 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR5_PELPD Length = 557 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 146/579 (25%), Positives = 236/579 (40%), Gaps = 59/579 (10%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFL-KKLPKPYVMLFDLHGMDERL 80 + +L+++FG +V+I + + ++ + + YV + D Sbjct: 6 LQQLKDKFGSAIQQADVVNDMRLLVYIDPASVKPICQYIFRDMDARYV--ISIGSDDRPY 63 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 + F VF+ + L + + + + + P ANW ERE DL Sbjct: 64 --------SGKFLVFHQFAFDKEKILFSIICQLPGENPRIDSISGIIPAANWAERELKDL 115 Query: 141 FGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 GI GHP +R+++P W HPLRKD+ + E Sbjct: 116 LGIEPVGHPYPKRLVLPDAWPDGHHPLRKDFAWN------------------KIPEGYDE 157 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 E + GP HP+ L +DGE + C HRG EK+ E Sbjct: 158 EREFDFDETPPGCTAVPFGPFHPTLDEPEHFRLYVDGEFVRGCEYRGFMVHRGIEKLSES 217 Query: 259 -QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 ++ +RI + GCV+ + + AVE AG+ VP R IR ++ E+ R++SH + Sbjct: 218 VLGYNDVPMMAERICGICGCVHSLAFCQAVENGAGVIVPPRAEFIRTIMLEIERLHSHPM 277 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 ++ VG T A+ R+ I L E ITG R IGGV D R Sbjct: 278 WVGLACHLVGFDTLFMQAWRIREPIMWLAEKITGNRKTYGLGIIGGVRWDFTPELIAETR 337 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 LD + A ++ + R+ GV E G G R G+D D R+ Sbjct: 338 AVLDKLESEWRQVVAAVSKDKNIMARTSGVGMADKALCKEMGLVGPVARGGGVDIDARRD 397 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 PY+ Y+ DF++ + +D + RV++++ E+ +S+ I+ QC + MP+GP AD Sbjct: 398 HPYAAYDRVDFKV-ITHNTADVWGRVVVRMLEVFESINIIRQCFDKMPQGPLVADITTEL 456 Query: 498 PPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV 557 P + + IEA +G + ++ + R R Sbjct: 457 PAGRV--------------------------GYTSIEAPRGESHHFAITGDDNRPRRWRA 490 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R P++ +LQ IPA I+ ++D+ + LG ID MS DR Sbjct: 491 RAPTYQNLQGIPAMIKDQRIADMQISLGGIDPCMSCTDR 529 >UniRef50_D1C6X3 NADH dehydrogenase I, D subunit n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6X3_SPHTD Length = 410 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 161/397 (40%), Positives = 237/397 (59%), Gaps = 2/397 (0%) Query: 201 GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 ++ ++ M LN+GP HPS HG R+ L L+GE I C P IGY HRG EK+GE + Sbjct: 15 EERQISDTRREMVLNMGPQHPSTHGVLRVRLTLEGETITACDPVIGYLHRGVEKIGESKR 74 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 320 + + P+TDR +Y+ N + YVLAVEKL GI P+R R+++ EL RI SHL+++ Sbjct: 75 YAQFTPWTDRTDYVAAPSNNLGYVLAVEKLLGIEAPERAQYWRMIMGELARIASHLVWLG 134 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 T D+GA++ + F +R+ I D+ E G R+ IGG + +P G ++R+FL Sbjct: 135 THALDIGALSMSLYCFRERELILDIFEKFCGARLTTNMMEIGGFSRPIPAGLPEMIRDFL 194 Query: 381 DWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPY 440 P+R YE N I R++GV A+ +G TGA LR +G+++DVRKA+PY Sbjct: 195 KVFPQRQREYEDLLSANPIWLARTRGVGVIEPDVAINYGLTGACLRGSGVNYDVRKAQPY 254 Query: 441 SGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPP 499 Y+ DFE+P+G D Y R ++++EE+RQSL+I+EQCL+ +P +GP K P Sbjct: 255 LLYDRIDFEVPLGTQ-GDVYDRYLVRMEEMRQSLKIIEQCLDQVPTDGPLKLAESNYVIP 313 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 P E L E + HF+ V G P E + IE +KG YY+ SDGS + YR R+RT Sbjct: 314 PHETVLTTAEDMQRHFIWVIKGFSPPKGEVYMSIEHSKGELGYYIVSDGSPVPYRLRIRT 373 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 P F +LQ +P G++++D++ +G+ID V+ VDR Sbjct: 374 PDFVNLQSLPYLAEGAMLADVVALIGTIDIVLGSVDR 410 >UniRef50_C1XJB2 NADH dehydrogenase subunit D n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XJB2_MEIRU Length = 415 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 158/397 (39%), Positives = 242/397 (60%), Gaps = 4/397 (1%) Query: 203 KRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWH 262 + M LN+GP HPS HG R+V+ L GE+I+ P IGY H G EK E +++ Sbjct: 20 DAPELKSEVMTLNVGPQHPSTHGVLRVVVDLSGEQILRLTPHIGYLHTGFEKNMEHRTYT 79 Query: 263 SYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF 322 I YT R++YL +++ Y L+VEKL G VP R IRVML+EL RI SHL+++ T Sbjct: 80 QCITYTPRMDYLHSFSHDLAYALSVEKLVGAQVPPRAQAIRVMLNELSRIASHLVFLGTG 139 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDW 382 + D GA+TP F+AF +R+ + DL E ++G R H + RIGG+ DLP + +++F+ Sbjct: 140 LLDFGALTPFFYAFREREAVLDLFEWVSGQRFHHNYIRIGGLKEDLPPEFLGEVKKFIAQ 199 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 MP R+ YE ++ I R++GVA + A+ TG LRA+G+++DVRKA PY+G Sbjct: 200 MPARIDEYEALFRESPIFYERARGVAVIPPEVAINLSLTGGSLRASGVNYDVRKAYPYAG 259 Query: 443 YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP---EGPFKADHPLTTPP 499 YE +DF++PV G D + R+++++ E+R+S++I+ Q + + GP + +P + P Sbjct: 260 YETYDFDVPVLTG-GDVFDRMVIRILEMRESVKIIRQAVERLEALGPGPIRDPNPQISLP 318 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 P+ +E +I HF V+ G E + E+ +G YY+ SDG +M YR +VR Sbjct: 319 PRHLLETSMEAVIYHFKLVTEGFHPALGEVYVPTESARGELGYYIVSDGGSMPYRVKVRA 378 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PSF +LQ +P A +G ++D++V + S+D VM DVDR Sbjct: 379 PSFVNLQSLPYACKGVQMADMVVVIASLDPVMGDVDR 415 >UniRef50_B9L172 NADH dehydrogenase I, D subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L172_THERP Length = 409 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 156/395 (39%), Positives = 238/395 (60%), Gaps = 2/395 (0%) Query: 203 KRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWH 262 ++ T + LN+GP HPS HG R+ L L+GE ++ C P IGY HRG EK+GE + Sbjct: 16 RQITPTRRELVLNMGPQHPSTHGVLRVRLTLEGETVIACDPVIGYLHRGVEKLGESHRYA 75 Query: 263 SYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF 322 ++P+TDR +Y+ N + YVLAVEKL GI P+R R++++EL RI SHL+++ T Sbjct: 76 QFVPWTDRTDYVAAPSNNLGYVLAVEKLCGIQAPERAQYWRMIMAELTRIASHLVWLGTH 135 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDW 382 D+GA++ + F DR+ I D+ E G R+ IGG + ++P ++REF + Sbjct: 136 ALDIGALSVSLYTFRDRELILDIFEKFCGARLTTNMMEIGGFSREIPPDLPEMVREFCRY 195 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 PK + YE +N I R++GV A+ +G TGA LR +G+++DVRKA PY Sbjct: 196 FPKAIRQYEDLLTENPIWLARTKGVGVIEPDVAINYGLTGACLRGSGVNYDVRKAMPYLL 255 Query: 443 YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPK 501 Y+ +FE+P+G D Y R ++++EE+RQ+LRI+EQCL +P +GP A PP Sbjct: 256 YDRVEFEVPLGTH-GDVYDRYLVRIEEMRQALRIIEQCLEQVPTDGPLMAYESPYVIPPH 314 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 + + E + HF+ V G P E + +E +KG YY+ SDGS + YR R+RTP Sbjct: 315 KTVMTTAEDMQRHFIWVIKGFSPPKGEVYHAVEHSKGELGYYIVSDGSPIPYRVRIRTPD 374 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +LQ +P +G++++D++ +G+ID V+ VDR Sbjct: 375 FVNLQSLPYMAQGAMLADIVALIGTIDIVLGSVDR 409 >UniRef50_B1ZSF2 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSF2_OPITP Length = 531 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 131/579 (22%), Positives = 220/579 (37%), Gaps = 58/579 (10%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDER 79 PV EL+ RF V A++ + E + L + L + D Sbjct: 9 PVFDELQQRFEGQLQRVDASQPDELHLHAPLELASALCSTLYRKSGG--RLVSVFAED-- 64 Query: 80 LRTHREGLPAADFSVFYHLISIDRNRD-IMLKVALAENDLHVPTFTKLFPNANWYERETW 138 G Y+L ++D ++++V + + + T NW ERE Sbjct: 65 ------GRAGGAGFYVYYLYAVDAAHGFVLVRVVVPAERPELISLTNAVHAVNWQEREIQ 118 Query: 139 DLFGITFDGHPNLRRIMMPQTWKG-HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKP 197 DLFG+ GHPN RR ++ W PLRKD+ + T+ PF + K Sbjct: 119 DLFGLKLVGHPNPRRCVLHDDWPEVFPLRKDFDLQ-TQLPPFSGERHK------------ 165 Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 R E + +GP H + + GE ++ + Y H+G EK+ E Sbjct: 166 -----FREVAGEGVFQVPVGPVHAGVIEPGHFLFSVAGEPVLYLQLRMFYVHKGTEKLFE 220 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 + + I + + A+E+ AG+ P R +R + EL RI++H+ Sbjct: 221 SLPITHGVRLAESISGDSAFAHATAFCHAIERAAGVAAPPRGRALRTLCLELERISNHVA 280 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 I DV +T A ++++ E +TG R+ +GGV D L Sbjct: 281 DIGAICTDVAFVTAQMHALRLKEQVLRWNEQLTGNRLLRGMACLGGVRFDFDSAQLDALA 340 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 F+D + ++ + ++ + R + A + G G RA+GID D+R+ Sbjct: 341 AFVDTLEQQFKDLVELIRSHSGTRDRLETTGVLAPAVARDLGIVGIAGRASGIDHDLRRD 400 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 P Y+ F +PV D R++++ EEL QSL I+ Q L MP G Sbjct: 401 CPTDFYDQVQFTVPVFTE-GDVQRRMVVRREELFQSLGIIRQVLAKMPGGAIAT------ 453 Query: 498 PPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV 557 G V + +E +G +++ + R ++ Sbjct: 454 ---------------------PVGDVPADRIALGYVEGWRGEIFHWVHTAPGNRLARCKI 492 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + PS + + AI G+++ D V S + S DR Sbjct: 493 KDPSLQNWPALSEAILGNIIPDFPVVNKSFNLSYSGTDR 531 >UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET0_ARCPR Length = 709 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 153/584 (26%), Positives = 268/584 (45%), Gaps = 40/584 (6%) Query: 16 HLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHG 75 +++P + R D GV V + ++ D +K+ + L G Sbjct: 163 RVENPAVVPNVERGRDDYAKTLEDVLGVRVYTVGKDHYYAFVDDVKRSAEILAHL----G 218 Query: 76 MDERLRTHREGLPAAD-FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYE 134 D + +P D F V + L + + + + L ++ + V + + +FP++++ E Sbjct: 219 FDNVKDVNVLDVPHEDTFIVEFTLHNYENYKLVTLAKRISRKNPKVESLSDIFPSSDYME 278 Query: 135 RETWDLFGITFDGHPNL-RRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEAL 193 RE + FG+ F+G+ + R ++ + PLRKD+ + ++ ++ Sbjct: 279 REMHEFFGVVFEGNKWMGRNFLLDVSTPKFPLRKDFRLESQSI-------EEERPFLQDF 331 Query: 194 TFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAE 253 + + D L +GP HP + G R++++LDG+ I D +PD GY HRG E Sbjct: 332 DGNLDVTKLPDEFVKGDEYILVVGPQHPGS-GHMRLIVKLDGDIIKDVIPDPGYVHRGVE 390 Query: 254 KMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRIN 313 K+ E + + IP +R ++ YV A+E+ GI V +R IR +L+EL RI Sbjct: 391 KIAESRIYIKNIPLVERPCITDFANYDICYVKAIEEALGIEVSERAKYIRTILAELCRIG 450 Query: 314 SHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWD 373 +HL +G T +AF R+ + + + +TG R+ ++ GGV D+ Sbjct: 451 THLYDAGILSIFLGHSTGFMWAFGLREFVCEALTILTGARVTGSFIVPGGVRWDVSDEKL 510 Query: 374 RLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFD 433 R +RE + M +RL +EK ++N + R + V K+A E G G LRA+ + D Sbjct: 511 RRVREIVLAMRRRLEKFEKMFVKNPTVVARLENVGILSKKDAKELGIVGPFLRASNVRHD 570 Query: 434 VRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH 493 R + Y Y+ D+++ V D Y R++++VEE+ QS++I++Q + ++P G K D Sbjct: 571 WRL-KGYEAYDCVDWDV-VTAEEGDSYARLLVRVEEINQSIKIIDQLVRDLPSGETKVDM 628 Query: 494 PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDG-STMS 552 T V+P E +E +G + SDG ST Sbjct: 629 WKLT-----------------------DLVLPLGEFVSCVEGARGTIYMSIVSDGESTTP 665 Query: 553 YRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR R+ TPS+ +L+ A +G ++DL GS + + DR Sbjct: 666 YRFRIVTPSWYNLRGFVEACKGERLADLQAIYGSFGYFPPEADR 709 >UniRef50_B5YKI5 NADH-quinone oxidoreductase subunit D 1 n=12 Tax=Bacteria RepID=NUOD1_THEYD Length = 397 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 146/387 (37%), Positives = 226/387 (58%), Gaps = 4/387 (1%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 +N+GP HP+ HG R+VL+L+GE I C+P IGY HRG EK+ E ++ +P TDR++ Sbjct: 12 TVNMGPQHPATHGVLRLVLELEGEVIKKCIPYIGYLHRGVEKLSEDLTYVQSLPITDRMD 71 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 YL VN + + +AVEKL GI +P+R IR ++ E+ RI SHL++I+T D+GAMT Sbjct: 72 YLSSMVNNVGFCVAVEKLMGIQIPERAKFIRTIMGEMARICSHLVWIATHALDIGAMTVF 131 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 +A DR+ + +L E +TG R+ ++ R+GGV D+ + +F++ P+++ YE Sbjct: 132 LYAMRDREYLLELFEMVTGARLTVSYPRVGGVRCDVNNEFLDKTYKFIEEFPRKVEEYET 191 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 +N + R++GV A+EA+ WG TG LR +G+ +DVRK PY Y+ DFE+P+ Sbjct: 192 LIDRNRVWLKRTKGVGVISAEEAINWGLTGPTLRGSGVYYDVRKFFPYDAYDKVDFEVPL 251 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 G D Y R ++ E RQS +I++QC+ +P+G A++ L P+ + +I Sbjct: 252 GKN-GDIYDRYKCRMLEFRQSAKIIKQCIERLPDGSILAENALRIRMPESPLKIDKKDII 310 Query: 513 THFLQVSW---GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 + E + +EA +G +Y+ D S+ YR RVR PSF H +P Sbjct: 311 FDVYIEDKQIQEFIQKFTEVYASVEAPRGELGFYIVCDNSSKPYRMRVRAPSFVHAGVLP 370 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 GSLV+D+I +GSID V+ + DR Sbjct: 371 KLCEGSLVADVIANIGSIDIVLGECDR 397 >UniRef50_B5YL34 NADH-quinone oxidoreductase subunit D 2 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=NUOD2_THEYD Length = 401 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 147/396 (37%), Positives = 231/396 (58%), Gaps = 5/396 (1%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 ++ L +GP+HP+ HG +++ + +GE +++ PD+GY HRG EK+ E +++ Sbjct: 7 EKVSDTTFVLQMGPHHPATHGVLKLLCEFEGERVINIKPDVGYLHRGVEKLSESKTYPGA 66 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 + TDR++Y+ N + Y LAVE+L GI P R IR M+SE+ R++SHLL+++T Sbjct: 67 MTLTDRLDYISSMTNNIGYCLAVERLMGIEPPPRAKFIRTMVSEMTRLSSHLLWLATHAL 126 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 D+GAMT +AF +R++I E I G R+ ++ RIGGV D+ + +F+D M Sbjct: 127 DIGAMTVFLYAFREREQILQFFEKICGARLTVSYPRIGGVRVDIKEHVLDEIYKFMDLML 186 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 R+ YE +N I R++GV ++A+ G TG LR +G+ +D+RK PY Y Sbjct: 187 IRVDEYETLLTENRIWIARTRGVGVIAPEDAVLLGLTGPALRGSGVYYDIRKQIPYDAYS 246 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHP--LTTPPPKE 502 DFE+P+G D Y R + ++ E+RQS+ I++QC+ MPEG +D + P + Sbjct: 247 EIDFEVPLGEK-GDTYDRYLCRIREMRQSVLIVKQCIEKMPEGKILSDKSPDIDLPHQAK 305 Query: 503 RTLQHIETLITHFLQVSWGP--VMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP 560 R ++ ++L F+ S +MP E + IEA KG +Y+ SDGS YR RVR P Sbjct: 306 RKIEPGDSLWNGFIAFSEEKQEIMPKGEIYSAIEAPKGELGFYIVSDGSGRPYRMRVRAP 365 Query: 561 SFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SF H+ IP G L++D+I +G++D VM + DR Sbjct: 366 SFIHISAIPKLCEGHLLADVIAIIGTLDIVMGEADR 401 >UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 Tax=Archaea RepID=Q64DY8_9ARCH Length = 788 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 155/604 (25%), Positives = 262/604 (43%), Gaps = 44/604 (7%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 ++ L+ + ++ T + E L+E L D G+D Sbjct: 203 KDLVKNLKAQLNGLYTSITVTDKNRIAIKTSPENLVETSRKL----------SDTMGVDH 252 Query: 79 RLRTHREGLPAAD-FSVFYHLISIDRNRD-IMLKVALA---ENDLHVPTFTKLFPNANWY 133 + +P F V Y + ++L + E + +P+ T L+ +AN+ Sbjct: 253 VKSVNVIDVPHERKFMVEYMVSGYTEELMPVILTIFTEIGREAEPEIPSLTSLWESANYS 312 Query: 134 ERETWDLFGITFDGHPNLR-RIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEA 192 ERE D FG+ F G+ ++ + ++ PLRKD+ +++ E + Sbjct: 313 ERELHDFFGVKFKGNEGMKGKFLLAPDTPDTPLRKDFKLEEEQYTIEEGVPLTPTITPPH 372 Query: 193 LTFKPEEW----------------GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGE 236 + + E D +GP+H + G R V+++ G+ Sbjct: 373 YMPPSSSLSYSESELEDLKMPAYEDVLKEAEKNDEFVAFIGPHHSGS-GHLRWVMRMKGD 431 Query: 237 EIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVP 296 I D +PD GY HR EK+ E + + +P T+R + YV A+E GI VP Sbjct: 432 IIKDVIPDPGYVHRSMEKIAENRLYIQNVPLTERPNISDPINMNLGYVRAIENALGIEVP 491 Query: 297 DRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHP 356 +R IR +++EL RI + + F +G T ++F R+ + +L+ +TG R P Sbjct: 492 ERAKYIRTIMAELSRIGAFFYDMGIFPLFMGHSTGFMYSFAIREMVLELMVRMTGSRCTP 551 Query: 357 AWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEAL 416 ++ GG+ D+P R+F + KRL YE + N +L R + V +EA+ Sbjct: 552 SFIVPGGIRRDIPDDVLDRTRKFTTAIHKRLKKYENIFVYNPVLISRMKEVGVLTREEAI 611 Query: 417 EWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRI 476 G G LRA+G+++DVRKA PY Y+ D+E G DC R+ ++EE++QS+ I Sbjct: 612 RCGIVGPFLRASGVEYDVRKAEPYEVYDKLDWE-ATTGDAGDCLGRIFGRLEEMKQSVEI 670 Query: 477 LEQCLN---NMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMI 533 + Q ++ MP G ++ L ++ V V+P E + Sbjct: 671 VRQAVDAVQEMPRGGVISEEILGDYKEASDDIRGY------LYNVYGDLVLPKGEWTSVT 724 Query: 534 EATKGINSYYLTSDG-STMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMS 592 EA +G Y + SDG S + YR R+ TP + +L+ I A +G V+D S + Sbjct: 725 EAARGTVLYSIISDGESNVPYRVRIITPCWMNLRGIIEASKGERVADFWTVYASFGYFPP 784 Query: 593 DVDR 596 + DR Sbjct: 785 EADR 788 >UniRef50_Q6MDR3 NADH-quinone oxidoreductase subunit D n=2 Tax=Parachlamydiaceae RepID=NUOD_PARUW Length = 402 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 148/395 (37%), Positives = 231/395 (58%), Gaps = 1/395 (0%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 +K E+ D M LNLGP HPS HG R+ L+L+GE ++ C P IGY H G EK E +++ Sbjct: 9 LKELEESGDVMELNLGPQHPSTHGVLRLKLRLEGEVVLSCDPVIGYLHTGVEKECESRTY 68 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 H DR++YL G E + A+E+L I VP+R IR++L EL RI SHLL+ T Sbjct: 69 HQVFTLVDRLDYLSGPAEEQAFAGALERLMNIEVPERAQTIRIILLELSRIASHLLWAGT 128 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 ++ + ++F +R+KI DL E ++G RM P+ +RIGG+A DL + L+EF+ Sbjct: 129 SALELNMSSVFMYSFAEREKILDLFEQVSGARMFPSLWRIGGLAKDLNSDFISHLKEFIS 188 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 K ++ N + R QGVA + ++ TG LRA+GI +D+RKA PY Sbjct: 189 GFQKIWKELDRLLTDNFVWCKRLQGVAVIDQEICKQYMCTGPVLRASGISYDIRKAYPYL 248 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 GYEN++F+IP D Y R ++++EE+ QS+ I+EQ + + G + PP+ Sbjct: 249 GYENYNFDIPT-HIDGDSYARYLVRMEEMLQSISIIEQAIARLKPGVVLTNDRKVALPPR 307 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 + + +E +I F +S G P + +E+ +G +Y+ SDG+ YR RVR+PS Sbjct: 308 KELARSMEAVIHQFKLISEGLHPPVGSVYNCVESARGELGHYVISDGTPKPYRLRVRSPS 367 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F+H++ + +RG ++SD++V + S+D ++ DVDR Sbjct: 368 FSHVEVLKKVLRGHVISDVVVAIASVDPILGDVDR 402 >UniRef50_C8W240 Hydrogenase, large subunit-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W240_DESAS Length = 525 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 125/551 (22%), Positives = 219/551 (39%), Gaps = 61/551 (11%) Query: 48 IKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDI 107 + +E LK L + G+DER FSV+ + Sbjct: 34 VPAASFMETVKRLKAEGA---YLLTMTGVDERDYN-------GHFSVYSVFGLPGDTTLV 83 Query: 108 MLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPL 165 K+ L + + + + P+A+W ERE D+ GI GHP+LRR+ + W P+ Sbjct: 84 ETKIVLNAENPTFTSISPVMPSAHWLEREIKDMLGIVPYGHPDLRRVAVHPDWPQDVFPM 143 Query: 166 RKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHG 225 RKD+ A + + + +++ + E E + +GP H Sbjct: 144 RKDFIAGRQ------VPRVQGEMQFCKV-------------EGEGLYQVPVGPVHAGIIE 184 Query: 226 AFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVL 285 GE++++ + Y HRG EK E + + + +R+ + + + Y Sbjct: 185 PGHFRFFTFGEDVINLQAQLFYTHRGIEKTAEGKHFLDAVLVAERVCGVCSASHAVSYAQ 244 Query: 286 AVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDL 345 A+E LAGI P R IR +L E+ R+ +H+ I +G + ++++ + Sbjct: 245 AIESLAGINAPLRARYIRTVLLEMERLYNHVGDIGNMCAGIGFSFGISRGAELKERLMRM 304 Query: 346 VEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQ 405 + G R GGV DL + LD + + L L + L R Q Sbjct: 305 NMKLAGHRYLRGTVVPGGVKIDLKD--TEGIGRALDTVKRELKELTDTMLSSQSLLDRMQ 362 Query: 406 GVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVML 465 A + G TG RA+G++ D+R+ PY+ Y F++P+ D Y R++ Sbjct: 363 TTGVLPTDAARDLGATGPAARASGVNRDLRREFPYAAYRRVSFQVPI-QHEGDVYCRLIQ 421 Query: 466 KVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMP 525 ++EE QS I+ Q NN+P G +A + P Sbjct: 422 RIEESEQSFDIIRQVFNNLPAGELQA---------------------------PITYLQP 454 Query: 526 ANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLG 585 + + E+ +G N +++ S YR VR+ S + +P + G++V D + Sbjct: 455 YHTAVGYTESARGANVHWVMSGPDNTVYRYMVRSASHCNWPVVPLCLPGNIVPDFPLINK 514 Query: 586 SIDFVMSDVDR 596 S + + +DR Sbjct: 515 SFELCYACLDR 525 >UniRef50_C1D0H4 Putative NADH dehydrogenase (Quinone), subunit D (NADH-quinone oxidoreductase, subunit D) n=1 Tax=Deinococcus deserti VCD115 RepID=C1D0H4_DEIDV Length = 412 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 152/389 (39%), Positives = 229/389 (58%), Gaps = 1/389 (0%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + + M LN+GP HPS HG R+V+ +DGE + VP +GY H G EK E +++ + Y Sbjct: 25 HTEVMSLNVGPQHPSTHGVLRLVVDMDGEYVRKVVPHMGYLHTGFEKTFEHRTYQQGVTY 84 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 R +YL +E+ YVL+VEKL VPDR ++IRV+L EL RI+SHL+++ T + D+G Sbjct: 85 APRTDYLHCFGHELAYVLSVEKLMQAQVPDRASMIRVILHELGRIHSHLVFVGTGLLDLG 144 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 A+TP F+AF +++ DL E TG+RM+ +FR+GG++ D+P W + +FLD M + + Sbjct: 145 ALTPFFYAFREKESCVDLFEEATGYRMNQGFFRVGGLSRDVPEDWPGHVAQFLDQMERGV 204 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y N I R++GV AL+ G TG LRA+G+ DVRKA PY GYE +D Sbjct: 205 DEYTNLFANNPIFLDRARGVGVIPTDVALDLGLTGPNLRASGVPLDVRKAHPYCGYEAYD 264 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F + + D R +++ E +S++I+ Q L + G K + + PP+ Sbjct: 265 FNV-ISSTDGDSLARFTMRLLEFSESIKIIRQALARLKPGLIKDPNRKISLPPRHELETS 323 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +E +I HF V+ G P E + +E +G YY+ SDG ++ YR ++R PSF +LQ Sbjct: 324 MEAVIHHFKLVTEGFHPPTGEVYVPVEGARGEVGYYIVSDGGSVPYRVKIRAPSFVNLQA 383 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + A G+ +DLI L +ID V+ DVDR Sbjct: 384 LEYACVGAQFADLITILATIDPVLGDVDR 412 >UniRef50_Q1QP34 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=cellular organisms RepID=NUOD1_NITHX Length = 396 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 153/389 (39%), Positives = 226/389 (58%), Gaps = 5/389 (1%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 +N GP HP+AHG R+VL+LDGE + P IG HRG EK+ E +++ +PY DR+ Sbjct: 9 FTINFGPQHPAAHGVLRLVLELDGEVVRRVDPHIGLLHRGTEKLIEHKTYLQALPYFDRL 68 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ E + LA EKL IT+P R +IRV+ E+ R+ SHLL ++T DVGA+TP Sbjct: 69 DYVAPMNQEHAFCLATEKLLNITIPKRGQLIRVLYCEIGRLLSHLLNVTTQAMDVGALTP 128 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + F +R+K+ E +G RMH +FR+GGV DLP + +F D K E Sbjct: 129 PLWGFEEREKLMVFYERASGARMHANYFRVGGVHQDLPSKLLDDIWDFCDPFLKVCDDLE 188 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 +N I K R+ G+A +A WG +G +R +G +D+RKA+PY Y DF+IP Sbjct: 189 GLLTENRIFKQRNVGIAEVKLADAWGWGFSGVMVRGSGAAWDLRKAQPYECYSELDFDIP 248 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLN--NMPE--GPFKADHPLTTPPPKERTLQH 507 +G DCY R ++++EE+RQS+RI++QCL +PE GP PP + + Sbjct: 249 IGKH-GDCYDRYLVRMEEMRQSVRIMKQCLEKLRLPEGQGPVATRDHKIVPPSRAEMKRS 307 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +E +I HF + G +PA E + +EA KG YL SDG+ Y+ ++R PSFAHL Sbjct: 308 MEAMIEHFKLYTEGHRVPAGEVYVAVEAPKGEFGVYLVSDGTNQPYKCKIRAPSFAHLSA 367 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + RG +++D+ +GS+D V ++DR Sbjct: 368 MDFLTRGHMLADVSAIIGSLDIVFGEIDR 396 >UniRef50_B1W516 NADH-quinone oxidoreductase subunit D 1 n=24 Tax=Actinomycetales RepID=NUOD1_STRGG Length = 440 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 161/419 (38%), Positives = 228/419 (54%), Gaps = 19/419 (4%) Query: 196 KPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKM 255 +E +++ + +N+GP HPS HG R++L++DGE + + IGY H G EK Sbjct: 23 DWDEVVESAVKSDDERIIVNMGPQHPSTHGVLRLILEIDGETVTEARCGIGYLHTGIEKN 82 Query: 256 GERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRIN 313 E ++W + R++YL NE Y L VEKL GI +PDR V+RV+L EL R++ Sbjct: 83 LEFRNWTQGTTFVTRMDYLTPFFNETAYCLGVEKLLGIEDQIPDRATVLRVLLMELNRLS 142 Query: 314 SHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWD 373 SHL+ I+T ++GA T + + F DR+ + DL E TG RM+ A+ R GG+A DLP G Sbjct: 143 SHLVCIATGGMELGATTIMIYGFRDRELVLDLFELFTGLRMNHAFVRPGGLAQDLPPGAV 202 Query: 374 RLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFD 433 LREF+ M K L Y+K A N I K R Q V + G TG LR+ G+ D Sbjct: 203 DRLREFIKTMKKNLPEYDKLATGNPIFKARMQDVGYLDLTGCMALGATGPVLRSAGLPHD 262 Query: 434 VRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH 493 +RK+ PY GYE +DFE+P D Y R ++++EE+RQSLRI+EQC++ + GP Sbjct: 263 LRKSDPYCGYETYDFEVPTA-DTCDSYGRFLIRLEEMRQSLRIIEQCIDRLEPGPVMVAD 321 Query: 494 PLTTPPP----------------KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATK 537 P + +E LI HF V+ G +P + + +E+ K Sbjct: 322 KKIAWPAQLALGPDGLGNSLDHIRNIMGTSMEALIHHFKLVTEGFRVPPGQVYTAVESPK 381 Query: 538 GINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G ++ SDG T YR R PSF +LQ + A G V+D+IV + SID VM VDR Sbjct: 382 GELGVHVVSDGGTRPYRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVASIDPVMGGVDR 440 >UniRef50_Q24ST8 Formate hydrogenlyase subunit 5 n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST8_DESHY Length = 554 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 143/597 (23%), Positives = 242/597 (40%), Gaps = 47/597 (7%) Query: 4 LTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGD--FLK 61 + + E + R++ ++ V+ + P+ F+ +VW+K L EV + +LK Sbjct: 1 MGSMESSASLRNYFEERVLKQ------PEGFSFGLWTKNEGLVWLKPACLPEVMEQLWLK 54 Query: 62 KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVP 121 +P +L G DER H V Y L+ + + L E P Sbjct: 55 VPSRP--LLMTHVGNDERSLGHG--------FVIYLLLHFPGDFTLTLGARGIEK--SFP 102 Query: 122 TFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPF 179 + T L P NW ERE DL G+ DGHP+ R +++ W G +PLRK P P Sbjct: 103 SLTLLCPALNWPEREVRDLLGLHPDGHPDPRPLVLHPGWTGGFYPLRKPCPET-----PA 157 Query: 180 ELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIV 239 + ++ ++F P+ E E + +GP H Q GE ++ Sbjct: 158 SIGGECPGEALKEVSFNPQPLSFTE-AEGEGTFEIPVGPVHAGIIEPGHFRFQTIGETVL 216 Query: 240 DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRV 299 + Y H+G EK+ E + + +R+ + + + Y AVEKL G+ VP + Sbjct: 217 HLDAQLFYTHKGIEKLLEGKDLEEGLKIVERVCGVCAVSHALAYCEAVEKLKGMEVPRWI 276 Query: 300 NVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWF 359 R +L+EL R+ +H+ I VG A +++++ L + G R Sbjct: 277 LGWRTVLAELERLYNHVGDIGNLCAGVGFALGNVNALQNKEQLQRLNHQLFGHRFLRGNI 336 Query: 360 RIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWG 419 GGV L+ L + + + ++ + R+ + AL+ G Sbjct: 337 TPGGVKKIPQGEERAYLQRRLAELEQDFEEWLPLIQEHDGFRQRAITTGVLSKQSALDLG 396 Query: 420 TTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQ 479 TG RA+GI D R+ + YE E P D ++R+M++V E++QS +L + Sbjct: 397 VTGPAARASGISQDWRERHAHLLYEELKME-PQVEQEGDVWSRLMVRVREVKQSFALLAE 455 Query: 480 CLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGI 539 L D T + L +WG E+ +G Sbjct: 456 LLE--------GDFLQDTVEQGDFDLNGSGAFSPQPYSFAWG----------CAESPRGT 497 Query: 540 NSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + +L D YR R+R+ S+A+ +P A++G++V D + S + S DR Sbjct: 498 DVIWLMLDDEGKIYRCRIRSASYANWAAVPLAVQGNIVPDFPLINKSFELCYSCCDR 554 >UniRef50_Q1IS59 NADH-quinone oxidoreductase subunit D 1 n=2 Tax=Acidobacteria RepID=NUOD1_ACIBL Length = 381 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 140/395 (35%), Positives = 224/395 (56%), Gaps = 26/395 (6%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 + + + + LN+GP HPS HG R++L+LDGE ++ IGY HRG EK+ E +++ Sbjct: 13 ENKTFLDSNELVLNMGPQHPSTHGVLRVILKLDGERVLGTECVIGYLHRGVEKIAENRTY 72 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 + PY DR++Y+ N + Y AVEKL + P R +RV+L+EL R+ SH++++ T Sbjct: 73 VQFNPYVDRMDYVAAVSNGLGYCEAVEKLIDVQAPPRAQFLRVILTELNRLASHMVWLGT 132 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 D+GA+TP+F+ F DR+++ + E G R+ FRIGG ++ G+++ + ++ D Sbjct: 133 HALDIGALTPLFYTFRDREEVLKIFEKYCGARLTTHAFRIGGCIYEAYEGFEKDVLDYCD 192 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + R+ YE N I R++G+ A + G TG LRA G+ +D+RKA+PY+ Sbjct: 193 KLGPRIDEYEGLLTGNRIWLQRTKGIGILNAADCKALGVTGPVLRAAGVKWDLRKAQPYA 252 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y+ DF++P G D + R M++++E+RQS+RIL Q + +P GP A P P Sbjct: 253 AYDQVDFDVPTGEN-GDTFDRYMVRMQEMRQSIRILRQAVEKLPAGPTMAKVPKVLKP-- 309 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 P + IEA KG Y++ SDGS YR RVR PS Sbjct: 310 -----------------------PVGRIYHSIEAPKGELGYFIVSDGSLQPYRVRVRPPS 346 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +LQ + +RG+L++D++ +G++D V+ +VDR Sbjct: 347 FVNLQALDKMVRGALIADVVAVIGTLDIVLGEVDR 381 >UniRef50_B4SJH6 NADH-quinone oxidoreductase subunit D 1 n=211 Tax=Proteobacteria RepID=NUOD1_STRM5 Length = 436 Score = 480 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 154/412 (37%), Positives = 225/412 (54%), Gaps = 28/412 (6%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 +NLGP HP+AHG R+VL++DGE +V P +G HRG EK+ E + ++ I Y DR+ Sbjct: 26 YVMNLGPQHPAAHGVLRLVLEMDGETVVRADPHVGLLHRGTEKLAESKPFNQSIGYMDRL 85 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ NE YV A+E L GI P R IR M E+ RI +HL+ I T D+GAM Sbjct: 86 DYVSMMCNEHAYVRAIETLLGIEAPIRAQYIRTMFDEITRILNHLMNIGTGALDLGAMAV 145 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPR--------------------- 370 + +AF +R+++ D EA++G RMH ++R GGV +LP Sbjct: 146 MLYAFREREELMDCYEAVSGARMHATYYRPGGVYRELPEQMPKYKESRWKTGKQLRRLNA 205 Query: 371 ----GWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR 426 + F P R+ YE N I K R+ G+ ++A+EWG TG LR Sbjct: 206 AREGSLLDFIENFTREFPNRIDEYETLLTDNRIWKQRTVGIGVVSPQQAMEWGMTGVMLR 265 Query: 427 ATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLN--NM 484 +G+ +D+RK RPY+ Y+ DF+IPVG DCY R + +V E+RQS RI+ QC++ Sbjct: 266 GSGVAWDLRKKRPYAKYDAVDFDIPVGT-AGDCYDRYLCRVAEMRQSNRIIRQCVDWLRA 324 Query: 485 PEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYL 544 GP + PP ++ +E LI HF S G +PA E++ +EA KG YL Sbjct: 325 NPGPVMLHNFKVAPPSRQEMKSDMEALIHHFKLFSEGYQVPAGETYAAVEAPKGEFGCYL 384 Query: 545 TSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SDG+ +R +R P FAHL + +RG +++D++ +G+ D V +VDR Sbjct: 385 ISDGANKPFRVHLRAPGFAHLSSLDEIVRGHMLADVVAMIGTYDIVFGEVDR 436 >UniRef50_P77329 Hydrogenase-4 component G n=130 Tax=Bacteria RepID=HYFG_ECOLI Length = 555 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 143/581 (24%), Positives = 237/581 (40%), Gaps = 75/581 (12%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 ++ L+ +F + + +K L +V +L + L L G DER Sbjct: 13 ILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHDGW--LPVLFGNDERT 70 Query: 81 RTHREGLPAADFSVFYHLISID--RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 Y+ +S++ I++K + + P+ T P A W ERE Sbjct: 71 L--------NGHYAVYYALSMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIR 122 Query: 139 DLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 D++G+ G P+ RR+++P W HPLRKD P T + E F Sbjct: 123 DMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDA--MDYRLRPEPTT------DSETYPFI 174 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 E N D + +GP H ++ L +DGE+IVD + Y HRG EK+ Sbjct: 175 NEG--------NSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEKLA 226 Query: 257 ERQS-WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH 315 E + ++ +DR+ + G + + Y +VE GI VP R + IR +L E+ R++SH Sbjct: 227 ETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSH 286 Query: 316 LLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL 375 LL + VG T F R+K + E + G R IGGV D+ + Sbjct: 287 LLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDILKEQRLQ 346 Query: 376 LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR 435 + + M ++ + L ++ R+QG+ + I D+R Sbjct: 347 TLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQ----------------IARDLR 390 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPL 495 PY+ Y N + G D ++RVM++V+E SL +LE L+NMP+ P + Sbjct: 391 FDHPYADYGNIPKTLFTFTG-GDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFS 449 Query: 496 TTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT 555 P + +EA +G + ++ + +R Sbjct: 450 YK---------------------------PHAFALGFVEAPRGEDVHWSMLGDNQKLFRW 482 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R R ++A+ + +RG+ VSD + +GS+D S DR Sbjct: 483 RCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 523 >UniRef50_Q2JFL7 NADH-quinone oxidoreductase subunit D n=81 Tax=Bacteria RepID=NUOD_FRASC Length = 482 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 161/426 (37%), Positives = 240/426 (56%), Gaps = 19/426 (4%) Query: 189 EMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYH 248 + +T E + G E + + +N+GP HPS HG R+VL+++GE + + IGY Sbjct: 58 RVYTVTGSDWEQILGVGEEENERIVVNMGPQHPSTHGVLRLVLEIEGETVTETRLVIGYL 117 Query: 249 HRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVML 306 H G EK E ++W + + R +YL NE Y L+VE+L GIT VP+R VIRVM+ Sbjct: 118 HTGIEKSCEYRTWTQAVTFLTRADYLSPLFNEAAYCLSVERLLGITEQVPERATVIRVMV 177 Query: 307 SELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAH 366 EL RI SHL++++T ++GA T + F F +R+K+ DL+E ITG RM+ A+ R GG+A Sbjct: 178 MELQRIASHLVWLATGGMELGATTAMIFGFREREKVLDLLELITGLRMNHAYIRPGGLAQ 237 Query: 367 DLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR 426 DLP G +R +R FL MPKR+ Y + K R V A + GTTG LR Sbjct: 238 DLPDGAERAIRAFLADMPKRIREYHALLTGQPVWKARMVDVNVLDAAGCIALGTTGPVLR 297 Query: 427 ATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE 486 A G+ +D+RK PY GYE ++F++P D + R ++++EE+ +SL+I++QCL+ + Sbjct: 298 AAGLPWDLRKTMPYCGYETYEFDVPTALE-GDSFARYLVRLEEMGESLKIVDQCLDRLRP 356 Query: 487 GPFKADHPLTTPPP----------------KERTLQHIETLITHFLQVSWGPVMPANESF 530 GP P ++ +E LI HF V+ G +PA + + Sbjct: 357 GPVMVADKKIAWPSQLSVGSDGTGNSLAYIRKIMGTSMEALIHHFKLVTEGFRVPAGQVY 416 Query: 531 QMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFV 590 IE+ +G Y++ SDG T +R VR PSF +LQ +PA G V+D+IV + S+D V Sbjct: 417 TQIESPRGELGYHVVSDGGTRPFRVHVRDPSFVNLQAVPALTEGGQVADVIVGVASVDPV 476 Query: 591 MSDVDR 596 + VDR Sbjct: 477 LGGVDR 482 >UniRef50_D2R5G7 NADH dehydrogenase (Quinone) n=2 Tax=Planctomycetaceae RepID=D2R5G7_9PLAN Length = 404 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 148/403 (36%), Positives = 213/403 (52%), Gaps = 4/403 (0%) Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 E + LN GP HP+ H R+VL+LDGE +VD VPDIGY H G EK+G Sbjct: 3 TIEKPSSTVKSEDYLWTLNFGPQHPATHTTLRLVLKLDGERVVDAVPDIGYLHSGFEKIG 62 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 E ++ Y+ TDR+ Y+ N + + AVEKL GI + R IR ++ EL RI+ HL Sbjct: 63 EHLDFNQYVTVTDRMNYISPMANNVAWHGAVEKLMGIEITPRCKYIRTIICELARISDHL 122 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 L D GA T +AF R++IYD+ E + G R ++ R+GG++ D+ + Sbjct: 123 LSTGAMGLDTGAFTFFLYAFYQRERIYDIFETLCGARFTNSYTRVGGLSQDMTPLVIEKI 182 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 R+FL P+ + E+ +N I R +GV + A TG RA+G+ D+RK Sbjct: 183 RDFLRTFPQTIDDMERLVNRNRIFVDRMKGVGLLSKERATNMSATGPVARASGVTRDLRK 242 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD-HPL 495 PY Y + DF++ DC+ R +++ E+R+SL+I+ Q L N+P GP Sbjct: 243 DEPYLAYGDLDFQVCCAT-AGDCFARYYVRMAEMRESLKIVAQALENLPAGPVNVGMDDR 301 Query: 496 TTPPPKERTLQHIETLITHFLQVS--WGPVMPANESFQMIEATKGINSYYLTSDGSTMSY 553 P K Q IE ITHF V G +P E + IEA G +YL DGS ++Y Sbjct: 302 AALPSKAEVYQTIEGTITHFELVMLNRGFTVPNEEVYSAIEAPNGELGFYLVGDGSDVAY 361 Query: 554 RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R R R PSF H P IRG +SD++ LGS++ + +++DR Sbjct: 362 RARCRPPSFIHFSLFPELIRGHTLSDVVAVLGSLNIIAAELDR 404 >UniRef50_C9LVK3 Proton-translocating NADH-quinone oxidoreductase, D subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVK3_9FIRM Length = 365 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 144/388 (37%), Positives = 218/388 (56%), Gaps = 26/388 (6%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + LN+GP HPS HG ++ L+L GE I P +GY HRG EK+ E +++ +PY Sbjct: 3 EKSTYILNMGPQHPSTHGVLQVELELSGERIERAKPILGYLHRGIEKLMESRTYAQCLPY 62 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 TD+++Y+ N + + AVEKLAGI VP R +RV+ +EL RI SHL++I T + D+G Sbjct: 63 TDKLDYVSSMNNNLAWCTAVEKLAGIRVPLRAEYLRVIAAELNRIASHLVFIGTLLNDLG 122 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 A T +AF DR+K+ DL + I G RM ++ R+GGVA D + + FLD++P+ L Sbjct: 123 AATAFVYAFRDREKVLDLFDLICGARMSTSYIRLGGVAFDATEEFIEKTQAFLDYVPEML 182 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y+ N I R +GV+ A+EA +GA LRATG+ +D+R+ PYS Y+ D Sbjct: 183 EEYDNLITGNEIFYARMKGVSPMTAEEAKALSLSGANLRATGVAYDIRRVEPYSVYDRLD 242 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 FE+PVG + D + R ++++E+ +S +I+ Q L MPEG + Sbjct: 243 FEVPVGT-LGDDWDRYEVRLKEIGESAKIIRQALKEMPEGSCR----------------- 284 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 VS P + +E T+G +Y+ SDG+ YR +R PSF +LQ Sbjct: 285 --------KVVSPNLRPPKGSVYHRVENTRGELGFYIVSDGTAKPYRVHIRRPSFVNLQA 336 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + RG+LV+D +V ++D +M +VD Sbjct: 337 LDPLCRGTLVADSVVVYSTLDPLMGEVD 364 >UniRef50_Q7NI12 NAD(P)H-quinone oxidoreductase subunit H 1 n=3 Tax=cellular organisms RepID=NDHH1_GLOVI Length = 393 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 152/392 (38%), Positives = 235/392 (59%), Gaps = 4/392 (1%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 + M +NLGP+HPS HG R+++ LDGE +VDCVP +GY HR EK+ E ++ Y+ Sbjct: 5 ETRAERMVINLGPHHPSMHGVLRLIVTLDGENVVDCVPVLGYLHRSMEKIAESRTIIQYL 64 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 PY R +YL E V A E+LAG+ VP R IRV++ EL RI SHLL++ F+ D Sbjct: 65 PYVTRWDYLATMFTEAITVNAPEQLAGVQVPRRARYIRVIMLELSRIASHLLWLGPFMAD 124 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 +GA +P F+ F +R+ IYDL EA TG RM +FR+GGVA DLP GW R+F +++P Sbjct: 125 IGATSPFFYIFREREMIYDLFEAATGMRMMHNYFRVGGVAVDLPYGWVDKARDFCNYLPP 184 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 ++ YE+ N I +GR +G+ G ++A+ WG +G LRA+G+++D+RK Y Y+ Sbjct: 185 KIDEYERLITNNPIFRGRVEGLGYIGREDAINWGLSGPMLRASGVNWDLRKVDHYEIYDE 244 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKA-DHPLTTPPPKERT 504 D+ + G D R +++++E+R+S++++ Q L+ +P GP++ + + PK Sbjct: 245 LDWNVAWDTG-GDTLARYVVRIQEMRESVKMIRQALDQLPGGPYENLEAQRLSGGPKSEW 303 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 I + S MP E + +EA KG YL D ST +R ++R P F + Sbjct: 304 NGFDYQFI--GKKSSPTFKMPRGEHYVRVEAPKGELGVYLIGDDSTFPWRWKIRPPGFIN 361 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 L +P ++G+ ++DL+ LGS+D +M +VDR Sbjct: 362 LAVLPKLVQGTKLADLMAILGSVDIIMGEVDR 393 >UniRef50_UPI0001C31275 NADH dehydrogenase I, D subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31275 Length = 413 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 150/411 (36%), Positives = 227/411 (55%), Gaps = 4/411 (0%) Query: 186 QDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDI 245 E++++ E GM E M +N+GP+HPS HG R++L L+GE + D P I Sbjct: 7 YRRREESISYSAEPAGMGLEQE---LMTVNMGPHHPSTHGVLRLILTLEGEMVRDVKPII 63 Query: 246 GYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVM 305 GY H G EK E++++ IP +R++YL N + AVEKL + VP R +RV+ Sbjct: 64 GYVHTGIEKTAEQKAYWKVIPVVERMDYLSYYFNAYAFCGAVEKLLEVDVPKRAQYLRVI 123 Query: 306 LSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA 365 EL RI SHL+++ T D+GA+ ++ F +R+++ DL E +G RMH +F++GGV Sbjct: 124 HMELNRIMSHLVWLGTSCIDLGAIGVWWYCFREREQVLDLFEMSSGQRMHTRYFQVGGVI 183 Query: 366 HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGL 425 D+PRGW ++ F M +R Y +N I R + + L G TG L Sbjct: 184 EDIPRGWTERVKRFTKTMRERSEQYSALLDRNEIFLQRMRHTGTVDEETLLGLGVTGPLL 243 Query: 426 RATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP 485 RATG +D+RKA PY Y++F F IPVG D Y R ++ E+ +S I++Q ++ +P Sbjct: 244 RATGNPWDLRKAAPYCSYDDFRFRIPVGTE-GDNYDRYRVRHAEILESCAIIDQAIDGLP 302 Query: 486 EGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT 545 EGPF + PP+ +E LI HF V+ G +P E + IE+ +G ++ Sbjct: 303 EGPFITEDRKVALPPRHELATSMEALIHHFKLVTEGFRVPPGEVYHPIESPRGELGCFVR 362 Query: 546 SDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SDGS+ R +R PSF +LQ AA R + ++DL+ L +D ++ VDR Sbjct: 363 SDGSSKPARVHMRDPSFVNLQATAAATRDTYIADLVATLAMLDPILGGVDR 413 >UniRef50_C0Z770 NADH-quinone oxidoreductase chain D n=2 Tax=Bacillales RepID=C0Z770_BREBN Length = 382 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 145/389 (37%), Positives = 215/389 (55%), Gaps = 27/389 (6%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + M LN+GP HPS HG FR+V+++DGE I + +P +GY HRG EK+ E ++ IPY Sbjct: 19 RTEEMLLNVGPQHPSTHGVFRLVVKIDGETIKEAIPVMGYLHRGTEKLAENLTYTQIIPY 78 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 TDR++Y+ N AVE + G+ +P+R +R++ EL R+ SHL++ TF+ D+G Sbjct: 79 TDRMDYVSAMTNNYVLCHAVETMMGLEIPERAQFLRLIAMELNRVASHLVWWGTFLLDIG 138 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 AM P +AF DR+ I DL + G RM + R+GGV D P GW +EF+ +M K L Sbjct: 139 AMGPFLYAFRDRETILDLFNELCGARMTFNYMRVGGVKWDAPPGWVDKAKEFVQYMKKEL 198 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 +Y + N I R G+ + K AL++ +G LR+TG+ +D+RK PY Y+ F+ Sbjct: 199 NNYHQLVTGNEIFINRLIGIGKFDTKTALDYSLSGVMLRSTGVKWDLRKDEPYCIYDRFE 258 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQ 506 F++P DC R L++ E+ QSLRILEQ L P EG P P Sbjct: 259 FDVPTATE-GDCMARYHLRMAEIEQSLRILEQALEQFPSEGEVMGKVPRVIRP------- 310 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 PA E++ IE+ +G Y+ S G +R + R PSF +LQ Sbjct: 311 ------------------PAGETYVRIESPRGEIGCYIASQGKDKPWRLKFRRPSFTNLQ 352 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +P ++G +S+++ LGSID V+ +VD Sbjct: 353 ILPKLLQGENLSNMVAILGSIDIVLGEVD 381 >UniRef50_A8VSQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A8VSQ7_9BACI Length = 371 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 136/392 (34%), Positives = 209/392 (53%), Gaps = 23/392 (5%) Query: 204 RGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHS 263 + M LN+GP HPS HG FR+ L++DGE I P +GY HRG+EK+ E + Sbjct: 2 PNELKTESMTLNMGPQHPSTHGVFRLQLEVDGETIQKATPIMGYLHRGSEKLAEGFLYTQ 61 Query: 264 YIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI 323 +IPYTDR++Y+ N Y +EKL VP+R +RV+ EL RI SHL++ T++ Sbjct: 62 FIPYTDRLDYMNAMTNNYVYCQTIEKLLDWEVPERAEYLRVITMELNRIASHLVWWGTYL 121 Query: 324 QDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWM 383 D+GAM+P +AF DR+ I D + I+G RM + RIGGV D P GW + E ++ + Sbjct: 122 LDIGAMSPFLYAFRDRETILDRLNEISGARMTFNYHRIGGVKWDAPEGWIDNVLETVEEL 181 Query: 384 PKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 ++ ++ N + + R+ GV ++ L WG +G R +G++ DVRK PYS Y Sbjct: 182 KHNISEFDTLVSGNEVFQARTIGVGVLSKEKVLNWGLSGPLARGSGVEVDVRKTEPYSVY 241 Query: 444 ENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKER 503 ++FDF++PV D Y R +++ E+ +SL+I+EQ N+PEG Sbjct: 242 DHFDFDVPVEQE-GDVYARYKVRIREMHESLKIIEQACKNLPEGDI-------------- 286 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFA 563 I + P E + EA+KG Y S+G YR ++R PSF Sbjct: 287 --------IHKKGKKIMMIKPPEGEVYTRAEASKGEIGVYAISNGKNKPYRVKLRRPSFV 338 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 ++ + + G + +L+ GS+D V+ +VD Sbjct: 339 NVSILQDMLIGESIQNLVAIFGSLDVVLGEVD 370 >UniRef50_Q979M3 NADH dehydrogenase I chain D n=6 Tax=Thermoplasmatales RepID=Q979M3_THEVO Length = 369 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 138/389 (35%), Positives = 212/389 (54%), Gaps = 22/389 (5%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 E++ +N GP HPS HG R+ ++LDGE + D P IGY HR AEK+ E Q + + Y Sbjct: 3 MEEWTEVNFGPQHPSMHGVLRLKVKLDGEIVKDVEPIIGYLHRNAEKICELQFYCDNMIY 62 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 DR++Y+ E+ Y+ A EKL + P R IRVM+ EL RI SHL+++ F D+G Sbjct: 63 FDRMDYVAAMNMEIGYLEAAEKLLDVEPPGRAKWIRVMMGELNRIASHLVWLGAFGLDLG 122 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 +TP F+ F +R+KI + ++G R + IGGV D+ +++F+ PK L Sbjct: 123 MLTPFFYCFKEREKILKIFTEVSGSRQQLNYMSIGGVYQDVTDEALDHIKQFITEFPKEL 182 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 ++N I R++GV + A+++G TG LRA+G+++DVRKA PY Y+ + Sbjct: 183 NMIANLFVKNDIFLSRTKGVGILSKEMAIDYGVTGPMLRASGVEYDVRKAEPYLVYDKVN 242 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F+IPV D R ++++EE+RQS++I++Q + +P GP+ + R Sbjct: 243 FDIPVS-FKGDNLARFLVRIEEMRQSVKIIDQTIQKLPAGPYFNQKAKKPLMIRLRG--- 298 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 E + E+ KG Y+ DGS YR RVR+P+F +L Sbjct: 299 ------------------QGEVYARTESPKGEFGVYIVGDGSLRPYRVRVRSPTFKNLSV 340 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +PA +G +++DLI GSID V +VDR Sbjct: 341 LPALAKGQMIADLISIGGSIDLVFGEVDR 369 >UniRef50_Q2RJU4 NADH-quinone oxidoreductase subunit D n=94 Tax=Firmicutes RepID=NUOD_MOOTA Length = 371 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 151/389 (38%), Positives = 220/389 (56%), Gaps = 26/389 (6%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + + LN+GP HPS HG +R +L LDGE++V IGY HRG EK+ E +++ IPY Sbjct: 9 RTEEIQLNMGPQHPSTHGVYRALLTLDGEKVVGVENIIGYLHRGIEKLAEDRTYTQVIPY 68 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 TDR++YL G +N + YV VEKL G+ VP+R +RV+++EL R+ SH++ +++ D+ Sbjct: 69 TDRLDYLAGMLNNLGYVQTVEKLLGLEVPERAEYLRVIMAELSRLASHMVMVASMALDLS 128 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T F F +R++I DL E G R+ ++ RIGGVA D+P G+ L FL+ +P+ + Sbjct: 129 GWTAWFPPFRERERILDLFEMTCGSRLTVSYMRIGGVAADIPPGFLPALESFLNDLPRMI 188 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 A N I K R QGV + AL +G TG LRA G+ FD+RKARPYS Y+ FD Sbjct: 189 AEMNGLITGNEIFKARCQGVGKIDLETALAYGITGPNLRACGLPFDLRKARPYSIYDRFD 248 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F+IP D Y R ++++ E+ QS RI+ Q + +P+GP +A P Sbjct: 249 FDIPTL-NNGDSYDRFVIRLLEMEQSARIIRQAMEQLPDGPVQAKVPRVL---------- 297 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +P E + IE KGI +YL SDG + YR + +PSF +L Sbjct: 298 ---------------KLPRGEVYHQIEGAKGILGFYLVSDGGSKPYRLHIHSPSFVNLGA 342 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P G + D +V + SID V+ +VDR Sbjct: 343 LPRISVGGTIQDFVVNIASIDIVLGEVDR 371 >UniRef50_A5UXK3 NADH-quinone oxidoreductase subunit D 1 n=20 Tax=cellular organisms RepID=NUOD1_ROSS1 Length = 374 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 153/385 (39%), Positives = 220/385 (57%), Gaps = 19/385 (4%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 +N+GP HPS HG FR+++ +DGE IVD P GY HR E++ E ++ +PYTDR++ Sbjct: 8 QINIGPQHPSTHGVFRMIVTVDGETIVDLKPVFGYLHRNHEQLAEVSTYIQSMPYTDRLD 67 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA-MTP 331 Y N LAVEKLAGI+VP R IRV++ EL RI +H + + D+GA TP Sbjct: 68 YFNSMANNHALALAVEKLAGISVPQRAEYIRVLMVELTRILNHASAVGFLLNDMGAWQTP 127 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + F +R+KI DL E +G RM +FR GGV DLP + L+E + +P +E Sbjct: 128 LMFGMREREKILDLFEMASGARMMCNYFRFGGVWRDLPPEFIPQLKELMQGLPSFFDEFE 187 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + +N IL R+ V + A+ + TG LRA+GI +DVR+A PYS Y+ DF+IP Sbjct: 188 RLLKENEILLSRTINVGVLPKEVAVSYSVTGPVLRASGIPYDVRRAEPYSVYDELDFDIP 247 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 +G V D Y R ++++EE+RQS RIL+Q + +P+ +P K++ L Sbjct: 248 IGS-VGDVYDRFLIRIEEMRQSYRILQQVIERLPDTTGGHINPAMANIGKQKAL------ 300 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 P +++ IE+ KG +YL SDGS YR +VR PSF +L + Sbjct: 301 -----------RPPPGDAYARIESPKGELGFYLVSDGSERPYRYKVRAPSFINLTPLGDM 349 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 RG V+D++V LGSID VM +VD+ Sbjct: 350 CRGHKVADVVVILGSIDIVMGEVDK 374 >UniRef50_Q0W6T4 [NiFe]-hydrogenase, large subunit (EchE-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T4_UNCMA Length = 486 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 127/523 (24%), Positives = 219/523 (41%), Gaps = 57/523 (10%) Query: 74 HGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWY 133 G+D +G+ ++ ++ +L+ L + + + T L P A+W Sbjct: 4 TGVD-------KGVAGIRVDYYFGFDHLEPGCHTILRTFLDRENPVLKSVTTLTPQADWS 56 Query: 134 ERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEAL 193 ERE + G+ + HP+ R + +P W+ + P + + Sbjct: 57 EREMIEFLGVRAEEHPDPRHLWLPLNWEQMHTDEAAPEKKPQ------------------ 98 Query: 194 TFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAE 253 + GP HP+ + + ++ E + +G++HR Sbjct: 99 -----SIQASDHITTMPVSTIPYGPYHPAFIESNYFKMAVEDEVVKKADLKLGFNHRSII 153 Query: 254 KMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRIN 313 K+ ER+ ++ I +R+ L + + + LAVE + +TVP R ++IR M+ E+ RI Sbjct: 154 KLMERRDYYKDIYLAERVCGLCNAHHALSFCLAVENIGQVTVPKRADIIRTMICEMERIQ 213 Query: 314 SHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWD 373 SHL+ I VG T + R+ I D +E ++G R+ +GGV D+ Sbjct: 214 SHLMAIGILGDLVGYKTMLMQFLRIREDIQDSLELVSGQRVTHGLITLGGVRRDITPAQS 273 Query: 374 RLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFD 433 ++ L + K + + L N +L GR + V +EA+ G G R +G D Sbjct: 274 NFVKRKLASLKKGVQTLYDEMLSNNVLIGRLKNVGVLPPEEAVRLGAVGPTARGSGQRLD 333 Query: 434 VRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH 493 VRK PY+ YEN D++I V D RV +K+ E S+ I+EQCL + Sbjct: 334 VRKNTPYAYYENLDWDI-VTDNGCDSLARVEVKMREALVSISIVEQCLEKL--------- 383 Query: 494 PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSY 553 +T PP ++ +P E+ E +G Y++ S+G+ Sbjct: 384 --STVPP---------------EIITKLEELPCAEALGKTEPPRGELLYHVASNGTNTPE 426 Query: 554 RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R+R P+F + + GS V+D+ +GSID S DR Sbjct: 427 FVRIRVPTFMTAYIMLKLLHGSYVADVPAIMGSIDPCYSCTDR 469 >UniRef50_Q30PI1 NADH-quinone oxidoreductase subunit D n=45 Tax=Epsilonproteobacteria RepID=NUOD_SULDN Length = 412 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 143/395 (36%), Positives = 215/395 (54%), Gaps = 7/395 (1%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 ++ M LN GP HPSAHG R++L L E IV PDIGY HRG EKM E ++ ++P Sbjct: 19 EDNEMILNFGPQHPSAHGQLRLMLHLQQEMIVKAHPDIGYLHRGMEKMAENMIYNEFMPT 78 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 TDR++Y+ N + LAVE+L G+ VP R VIR+ML E+ R+ SHL +++T D+G Sbjct: 79 TDRMDYIASSANNYGFALAVERLIGLEVPRRAKVIRMMLLEINRLMSHLFWLATTALDIG 138 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 AMT FAF +R+ + D++E G R+ A RIGGV D+ + L+ FLD +P+ + Sbjct: 139 AMTVFLFAFREREYLMDIMEGYCGARLTHAAIRIGGVPLDIQDTFITQLKTFLDKLPQNI 198 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 YE N I R + V + AL WG +G LRA+G+ +D+RK PY Y+ + Sbjct: 199 KDYEDLLDTNRIWLMRMEEVGVISKEMALSWGCSGPMLRASGVAWDIRKEEPYELYDEVE 258 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLN------NMPEGPFKADHPLTTPPPK 501 F +P D + R + +EE+R+S +IL Q ++ + A P PK Sbjct: 259 FRVP-YSDKGDNFARYRIYMEEMRESAKILYQTIDMYEKCVKDNQTELMAHAPKYISAPK 317 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 + +L+ HF+ V+ G P E + E+ KG +Y+ S G YR ++R PS Sbjct: 318 LDIMTQNYSLMQHFVLVTQGMRPPVGEVYVATESPKGELGFYINSQGGPYPYRLKLRAPS 377 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F H + + G + D++ +G+ + V +VDR Sbjct: 378 FWHTGILTDILPGHYIPDVVSIIGTTNIVFGEVDR 412 >UniRef50_Q67P19 NADH-quinone oxidoreductase subunit D 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOD1_SYMTH Length = 404 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 155/400 (38%), Positives = 236/400 (59%), Gaps = 5/400 (1%) Query: 201 GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 + + + M L++GP+HP+ HG R+ L+L+GE +V P+ G+ H G EK E + Sbjct: 6 DLHLEEQRPERMTLSIGPHHPATHGVLRVKLELEGETVVKAEPETGFLHTGIEKTAEHLT 65 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRINSHLLY 318 W+ DR++YL N YV+AVEKL GI +P++ V RV+L EL R+ SHL+ Sbjct: 66 WNQATTVMDRMDYLSPISNNTGYVMAVEKLLGIEDRIPEKARVTRVILLELNRVASHLVG 125 Query: 319 ISTFIQDVGAM-TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 + T D G + TP+F+AF R +I D+ E TG RM+P++ R+GG+A+DLP + ++ Sbjct: 126 LGTGGLDYGNIGTPIFWAFELRDRILDIFEHTTGQRMNPSYMRVGGLAYDLPHNFKEMVE 185 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 +FL P R+ + L N I R++GV+ ++AL +G TG LR TG D+DVRK Sbjct: 186 DFLKVAPGRIQELKDVMLHNPIFVDRAKGVSVITYEQALRYGLTGRNLRVTGSDYDVRKY 245 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLT 496 PY GYEN+DF++PV D ++RV + +E+ +SL+I+ Q L+N+P + + D Sbjct: 246 YPYLGYENYDFKVPVYTD-GDSWSRVAITFDEMFESLKIIRQALDNLPWDDRYIIDDRKL 304 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 PPK+ +E LI HF V G +PA E + IE+ +G +Y+ SDG R R Sbjct: 305 VLPPKQEVKHSMEALIHHFKLVHHGFDVPAGEVYVSIESPRGEIGFYVVSDGGNKPMRVR 364 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 VR PSF + +P + G L+SD++ + +ID V +VDR Sbjct: 365 VRPPSFYAVYSLPVLLEGHLLSDMVGAIATIDPVFGEVDR 404 >UniRef50_B8I2P5 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=2 Tax=Clostridium RepID=B8I2P5_CLOCE Length = 530 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 130/580 (22%), Positives = 226/580 (38%), Gaps = 61/580 (10%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 ++ ++ + I + E + ++ + L Sbjct: 6 ILDTIKRLLSSHILESRLINENEIYFCISPSTVKE---------DCINVYKNIECVLVGL 56 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEN-DLHVPTFTKLFPNANWYERETWD 139 + +V+Y N I L L + V + P A+ YERE D Sbjct: 57 FANDTTPIDNKLTVYYTFAVRSSNTLITLYSKLENDGSAKVDSIALEVPAASLYEREIHD 116 Query: 140 LFGITFDGHPNLRRIMMPQTWK--GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKP 197 ++GI F+ P+ R ++ + HPLR+++ + L F+ Sbjct: 117 MYGIVFEELPDSRELVHHGNFPLDVHPLRRNFKSNTH------------------LPFQQ 158 Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 E E + +GP H + GE I++ + Y HRG EK+ E Sbjct: 159 RELEF-STITGEGVFEVPVGPVHAGIIEPGHFRFSVAGEPIINLEAKLYYVHRGLEKLCE 217 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT-VPDRVNVIRVMLSELFRINSHL 316 Q + + +++RI N + + A+EKL GIT +P+R RV+ +EL RI HL Sbjct: 218 NQHYMKVLLFSERISGDETFTNSLAFCQAIEKLNGITYIPERAVYSRVLFAELERICGHL 277 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 I D + P R+ I L E +TG R + GG+ D R ++++ Sbjct: 278 GDIQGLCVDTAYIFPSGQFAMMRRWIQLLNEQLTGSRFLRNTNKPGGLRRDFVRSNEKII 337 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 E ++ + K N + R + A++ G G RA+G+ DVRK Sbjct: 338 LECINKLDKEFKETVAIIKNNGMFIDRVEHTGILENSIAVDLNVVGPGGRASGVKTDVRK 397 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPL 495 PY+ Y F +P D R+ +K+EE+ +S+ I++Q L MP EGP D Sbjct: 398 EFPYAAYSKLKFNVP-EHSNCDVNCRMNVKIEEVIESINIIKQVLEKMPEEGPVSVD--- 453 Query: 496 TTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT 555 G + P + +F M E+ +G N +++ + + +R Sbjct: 454 ------------------------IGELKPYSYAFGMTESPRGENLHFVMTGENNTIFRY 489 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +VRTPSF + + A+ + ++D + S + + D Sbjct: 490 KVRTPSFCNWPALCHAVNTNTLTDFPLINKSFNLSYAGND 529 >UniRef50_P56753 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic n=201 Tax=cellular organisms RepID=NDHH_ARATH Length = 393 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 149/395 (37%), Positives = 225/395 (56%), Gaps = 2/395 (0%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 MKR +D M +N+GP+HPS HG R+++ LDGE++VDC P +GY HRG EK+ E ++ Sbjct: 1 MKRPVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAI 60 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 Y+PY R +YL E V E+L I VP R + IRV++ EL RI SHLL++ Sbjct: 61 IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP 120 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 F+ D+GA TP F+ F +R+ +YDL EA TG RM +FRIGG+A DLP GW +F D Sbjct: 121 FMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCD 180 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + + Y+K +N I R +GV G +EA+ WG +G LRA+GI +D+RK Y Sbjct: 181 YFLTEVVEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRKIDRYE 240 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y+ F++EI D R ++++ E+ +S++I++Q L +P GP++ + Sbjct: 241 SYDEFEWEIQ-WQKQGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFDRKR 299 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 E + S + E + +EA KG +L D S +R ++R P Sbjct: 300 NPEWNDFEYRFIS-KKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPG 358 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +LQ +P ++ ++D++ LGSID +M +VDR Sbjct: 359 FINLQILPELVKRMKLADIMTILGSIDIIMGEVDR 393 >UniRef50_A8A9X2 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X2_IGNH4 Length = 540 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 161/573 (28%), Positives = 280/573 (48%), Gaps = 54/573 (9%) Query: 37 QATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFY 96 + + V ++ + E LK + Y+ L +D VF+ Sbjct: 9 RKEWSNALYVEVEPQYWYENAARLKD--QGYLFPSMLTAVDWPA--------EKKVQVFF 58 Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPN------ 150 + I ++L + + +P+ + L+P W+E ET+++FGI F GHP+ Sbjct: 59 LVHRIRDASSVVLSTKVDRENRELPSLSSLYPGVEWHENETYEMFGINFTGHPDYERWGR 118 Query: 151 LRRIMMPQTWKGHPLRKD-YPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENE 209 +R++++ + + P KD +P +L K + E +R E Sbjct: 119 IRKLLLSEDPRLFP--KDRFPLLKDSGGYKDLPKVNWA--------EIEGTDQEREGLRE 168 Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 D ++ +GP HP+ HG +L L GE + D +P +GY HRG E + E++ + IP D Sbjct: 169 DLTYVYVGPQHPATHGPVGFLLGLKGEIVEDVIPRLGYVHRGVEWIYEQKEYLKVIPLLD 228 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R Y+ G E PYV+A+E++ + V R ++R++ +EL RI SHLLYI +F ++V + Sbjct: 229 RQCYIDGIGWEWPYVMALEEIMDVKVDRRAQLLRILAAELSRIQSHLLYIGSFAENVNHL 288 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 T + DR+ +L+E +TG RM + R GGVA DLP+G+ + + + K Sbjct: 289 TAFAWTVRDREVFINLLEMLTGQRMTFNYLRPGGVAFDLPQGFKDVYEKVVARFHKHFEK 348 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN-FDF 448 + L N + R++GVA A++A+++G +G LRA+G+ +D+R +PY GY++ DF Sbjct: 349 LIETTLDNPTVAMRAEGVAQVSAEDAIKYGWSGPNLRASGVAWDLRINKPYGGYDDGIDF 408 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 E VG V D R++++ EE+RQSL+I+ Q L + E + Sbjct: 409 EGAVGS-VGDNLDRMLVRFEEIRQSLKIIRQVLRELTE-------------------RGQ 448 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST-----MSYRTRVRTPSFA 563 L TH +V P P ++ ++ +G N L ++ S +R +R+P F Sbjct: 449 NELGTHLKRVPPFPRKP-GIAYGYHDSPRGENGILLVANPSDPKWRTRPWRVHMRSPVFV 507 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 H + +G L+ D + + S+D ++++DR Sbjct: 508 HTMSLKYLGKGLLLQDFLAFYISLDTCVAEMDR 540 >UniRef50_C6X0Z4 NADH-ubiquinone oxidoreductase chain D n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0Z4_FLAB3 Length = 420 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 148/386 (38%), Positives = 212/386 (54%), Gaps = 1/386 (0%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 LNLGP HP+ HG F+ VL +DGE I+ IGY HR EK+ ER+++ TD Sbjct: 35 QLYTLNLGPTHPATHGIFQNVLTMDGERILHSEQTIGYIHRAYEKISERRNFTQITTLTD 94 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R+ Y +N + + L VEKL G VP RV+ +RV++ EL RI H++ D GA+ Sbjct: 95 RMNYCSAPINNIGWHLTVEKLIGCEVPKRVDYMRVIMMELARIADHMVCNGVIAMDAGAI 154 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 T + + F +R+KIY++ E + G RM RIGG D + LL+ +L PK + Sbjct: 155 TGLTYLFQEREKIYEMYEQVCGARMTTNMGRIGGFERDFNDKFHELLQTWLKRFPKIWSE 214 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 + +N I R+ V A+ AL +G TG LRA G+D+DVR A PYS Y +FDF Sbjct: 215 FCALNERNRIFMDRTINVGPISAERALSYGFTGPNLRAAGVDYDVRVASPYSSYNDFDFI 274 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 IPVG D Y R M++ +E+ +SL+I+ Q N+P+GPF AD P P K ++E Sbjct: 275 IPVGS-AGDTYDRFMVRQQEVWESLKIINQAYKNLPDGPFHADVPEFYLPEKADVYNNME 333 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 LI HF V +P E + +E G +YL SDG YR R P F + Q P Sbjct: 334 ALIYHFKIVMGETDVPIGEVYNCVEGGNGELGFYLVSDGGRTPYRLHFRRPCFIYYQAYP 393 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVD 595 I+G ++SD +V + S++ + ++D Sbjct: 394 EMIKGGMISDAVVTMCSMNVIAGELD 419 >UniRef50_UPI00016C492D NADH dehydrogenase subunit D n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C492D Length = 409 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 141/406 (34%), Positives = 216/406 (53%), Gaps = 6/406 (1%) Query: 196 KPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKM 255 G + E LN GP HP+ H R++L LDGE IV VPDIGY H G EK+ Sbjct: 5 TAAPVEDIAGADQEFLYTLNFGPQHPATHTTLRLILTLDGETIVKAVPDIGYLHSGFEKL 64 Query: 256 GERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH 315 GE ++ Y+ DR+ Y+ NE + VEKL GI + R +R +L+EL RI+ H Sbjct: 65 GEDLDFNQYVTIVDRMNYISPFANECAWFTTVEKLIGIELTPRCKYLRTILAELARISDH 124 Query: 316 LLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL 375 LL + D+GA+T +AF R+K+Y+++EA +G R HP++ R+GG+ D+ L Sbjct: 125 LLCVGAAALDLGALTGFLYAFNAREKVYNIMEAASGQRFHPSYCRVGGLMADVNDDVVAL 184 Query: 376 LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR 435 +R+F+ K A + +N I R++G+ ++A+ +G RA+G+ D+R Sbjct: 185 IRDFVKTFRKVHADICRLLNRNRIFIDRTKGIGVLSKEDAINTSCSGPVARASGVVRDLR 244 Query: 436 KARPYSGYENFD--FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD- 492 K PY Y+ F+I G G DCY R ++++ E+ +S +I+ + N+P GP D Sbjct: 245 KDEPYLAYKELSGAFKIVCGKG-GDCYNRYLVRMGEMLESWKIINAAVENLPSGPVNVDL 303 Query: 493 HPLTTPPPKERTLQHIETLITHFLQVSWGPV--MPANESFQMIEATKGINSYYLTSDGST 550 + T P K T + IE LI HF W P E + E G +YL +DG+ Sbjct: 304 NDKLTIPDKNATYRSIEGLIQHFELFMWNRRWETPVEEVYGANETANGELGFYLVADGTG 363 Query: 551 MSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++R R R PSF H P + G +SD+ LGS++ + +++DR Sbjct: 364 KAFRARTRPPSFIHFAVFPMMMEGHQISDVPAVLGSLNIIAAELDR 409 >UniRef50_A5FKI7 NADH-quinone oxidoreductase subunit D n=17 Tax=Bacteria RepID=NUOD_FLAJ1 Length = 412 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 149/392 (38%), Positives = 214/392 (54%), Gaps = 2/392 (0%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + + LNLGP HP+ HG F+ +L +DGE I++ P IGY HR EK+ E + ++ Sbjct: 21 NEDGSELSVLNLGPTHPATHGIFQNILLMDGERILEAEPTIGYIHRAFEKIAENRPFYQI 80 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 P TDR+ Y +N M + + +EKL GI VP R +RV++ EL RI H++ S Sbjct: 81 TPLTDRMNYCSSPINNMGWWMTLEKLLGIEVPKRAQYLRVIVMELARITDHIICNSILGV 140 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 D GA T + F R+KIY++ E I G R+ RIGG D R L +FL+ P Sbjct: 141 DTGAYTGFLYVFQFREKIYEIYEEICGARLTTNMGRIGGFERDWSPEAFRKLDKFLEEFP 200 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 +E +N I R+ V A++A+ +G TG LRA G+D+DVR A PYS YE Sbjct: 201 PAWKEFENLFERNRIFLDRTVNVGGITAEKAMAYGFTGPNLRAAGVDYDVRVAHPYSSYE 260 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEG-PFKADHPLTTPPPKER 503 +FDF +PVG D Y R ++ E+ +SL I+ Q L MP G + A+ P PPKE Sbjct: 261 DFDFIVPVGK-SGDTYDRFCVRNAEVWESLSIIRQALEKMPAGNEYHAEVPDYYLPPKED 319 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFA 563 +E+LI HF V +P +E + +E G +YL +DGS YR R P F Sbjct: 320 VYNSMESLIYHFKIVMGEVPVPVSEIYHAVEGGNGELGFYLATDGSRTPYRLHFRRPCFI 379 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + Q P I+G+L+SD I+ L S++ + ++D Sbjct: 380 YYQAFPEMIKGALLSDAIIILSSLNVIAGELD 411 >UniRef50_D1Z1Z0 Putative [NiFe]-hydrogenase large subunit n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Z0_METPS Length = 530 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 126/553 (22%), Positives = 225/553 (40%), Gaps = 54/553 (9%) Query: 45 VVWIKREQLLE-VGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDR 103 +V I+ + + + V + LK L G+D G+ + ++ + Sbjct: 3 IVEIRPDAISDNVTELLK----RGARLIYASGVD-------MGVRGIKVNYYFCFDMKEP 51 Query: 104 NRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGH 163 + +L+ L + V + T + A+W ERE + G+ GHPN + +P W Sbjct: 52 SEHTILRTYLDRENPVVQSITPITDQADWSERELIEFLGVKVQGHPNPTHLWLPLNWDDM 111 Query: 164 PLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSA 223 L + + D E E + P + + GP HP+ Sbjct: 112 YL---------------NGRPEADHETERINAAPPATTPRDNIVTLPVTAIPYGPYHPAF 156 Query: 224 HGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPY 283 + + + ++ E + +G++HR K+ ER+ ++ I +RI + + + Sbjct: 157 IESNFLKMSVEDEVVKKVDLKLGFNHRSVIKLMERRDYYKDIFLAERICGFCNSHHALSF 216 Query: 284 VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIY 343 +VE +A I +P + + R +L E+ RI SHLL + G T + + R+++ Sbjct: 217 ARSVEDIASIDIPPKAKLARTLLCEMERIQSHLLAVGLIGDLTGFRTMLMHSLRVREEMQ 276 Query: 344 DLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGR 403 D +E ++G R+ IGG+ D+ + L M K + + AL N +L GR Sbjct: 277 DSLEVVSGQRVTHGLITIGGIRRDITPAQADFILNKLRIMKKSVPEFFDQALSNDVLVGR 336 Query: 404 SQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRV 463 + V + +++ G G R +G+ DVRK PY YE+ D++I V D R+ Sbjct: 337 LENVGVLSLENSVKLGAVGPTARGSGLRIDVRKNSPYEAYEDVDWDI-VTENGGDSLARM 395 Query: 464 MLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPV 523 +K+ E+ S+ I EQC + P + Sbjct: 396 KVKMREVLMSMHIAEQCCEKIKTAPA--------------------------GLATKVNE 429 Query: 524 MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVY 583 +P E+ E +G Y++ S+G+ R+R P+F + I+G V D+ Sbjct: 430 LPCGEAISKSEPPRGELLYHVASNGTNTPDFVRIRVPTFLTAHIMLRLIQGGWVGDVPAI 489 Query: 584 LGSIDFVMSDVDR 596 +GSID S DR Sbjct: 490 IGSIDPCFSCTDR 502 >UniRef50_A7H9V5 NADH-quinone oxidoreductase subunit D 2 n=8 Tax=Myxococcales RepID=NUOD2_ANADF Length = 431 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 146/384 (38%), Positives = 208/384 (54%), Gaps = 1/384 (0%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M +NLGP+HP+ HG R V++LDGE I DIG+ HRG EK E +W PYTDR+ Sbjct: 48 MTVNLGPSHPAMHGVTRAVVELDGEMIRSMKLDIGFLHRGFEKSCENVTWTQCFPYTDRL 107 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 Y+ +N + + LAVEKL + VP+R +RV+ SE+ RI HL + ++GAMT Sbjct: 108 NYVSSIMNNVGFALAVEKLCKLDVPERAKYLRVVTSEIHRICDHLTLVGAMAMELGAMTV 167 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +A R IYD + + G R+ + RIGGVA D P GW + LD + + + Sbjct: 168 FLYAIEARDIIYDRLAELCGARLTSNYGRIGGVARDTPDGWIEKTEKTLDRVKGYVDEID 227 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + +N I R++G +A+E G TG LRA+G +D+RKA PY Y+ DF+IP Sbjct: 228 QLVSRNRIFIDRTRGTGVVPRADAIELGFTGPCLRASGEPYDLRKAAPYLVYDRIDFDIP 287 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 VG D + R +++EE+RQS RI+ QC M G PPK IE L Sbjct: 288 VGTN-GDNFDRFQMRMEEMRQSDRIIRQCFAQMEPGEIAVQDFRYVLPPKPLVYGTIEGL 346 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 + HF + G +PA E++ EA G +Y+ SDG Y+ +R P + L +P Sbjct: 347 MAHFKIIMEGIQVPAGEAYGYTEAANGELGFYVVSDGGGRPYKLGLRAPGWPMLAALPFM 406 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVD 595 GSL+SDLI SI+ + +V+ Sbjct: 407 SVGSLLSDLIPTFDSINMIGGEVE 430 >UniRef50_B2V8R2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=3 Tax=Aquificales RepID=B2V8R2_SULSY Length = 524 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 122/578 (21%), Positives = 225/578 (38%), Gaps = 58/578 (10%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 ++ EL V+ L +V +L + L + D+ Sbjct: 1 MVEELLKPIKDLITDYSFNTENEIVIHTSDFNLAKVSQYLFRDLDCE--LATVVATDDDD 58 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 R + + YH +N +++ + E + + P NWYERE D+ Sbjct: 59 RFSDDRCFTIRYVYSYH----KKNVFFIVENKVKE---RFNSLANIIPALNWYEREIRDM 111 Query: 141 FGITFDGHPNLRRIMM-PQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKP 197 FG+ HP+ R +++ P+ + HPLRKD+ + FK Sbjct: 112 FGLVPLNHPDPRPLVLFPENFPSDLHPLRKDFDIKTRP------------------EFKS 153 Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 + E E + +GP H L GE I+ + HRG EK+ E Sbjct: 154 YGKYEYKEVEGEGVFNILVGPIHAGIIEPGHFRFSLAGEHILQLEIRHFWKHRGVEKLAE 213 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 ++ + ++ + + YV A+EKL+ +P R IRV+ +EL R+ +L Sbjct: 214 GKTAEEVLEIVPKVSGDHSYAHTLAYVQAIEKLSNTEIPKRAKYIRVLFAELERLMCNLN 273 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 ++ QDV F ++++ L +A+TG R + +IGGV+ DL + L+ Sbjct: 274 DVAWLFQDVAYSFGAQGMFILKEEVMRLNKALTGNRFNKNVLKIGGVSVDLNQEKINLII 333 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 + L ++ + Y+K + + R + + E G RA+ + D+RK Sbjct: 334 DKLGYITDKFEFYKKIIFDSASILDRFETTGRILYETVKELSCIGYTARASDLKSDIRKE 393 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 PY Y+ F DC+ R+ ++ ++ S+ I+++ L+++P+G Sbjct: 394 HPYLIYDKLTFTSQTFEE-GDCFARLKCRLSDIEDSISIIKEVLSDLPDGEIFTQS---- 448 Query: 498 PPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV 557 P+ + E +G Y++ +D R ++ Sbjct: 449 -----------------------NPLPANRWTLGYSEGQRGNIMYFVKTDKEGKIDRLKI 485 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 R PSF + Q I A+ G +V+D + S++ + D Sbjct: 486 RDPSFNNWQAIQWAVLGDIVADFPLVNKSLNLSYAGTD 523 >UniRef50_B8DS05 NADH dehydrogenase (Quinone) n=7 Tax=Deltaproteobacteria RepID=B8DS05_DESVM Length = 406 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 141/389 (36%), Positives = 214/389 (55%), Gaps = 24/389 (6%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + + LN+GP HPS HG R++L+LDGE IV P +GY HR EKM E ++ ++P Sbjct: 42 RPESLILNMGPQHPSTHGVLRVLLELDGEYIVRAEPVLGYLHRMHEKMAEVKTPAQFMPN 101 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 R++YL YV AVEKLAGI +P+R +RV+ EL RI+SHLL+ ++ D+G Sbjct: 102 MGRVDYLHALAWNWAYVGAVEKLAGIEIPERAEYLRVITCELNRISSHLLWWGAYLLDLG 161 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 A TP+ +AF DR+ + DL++ +TG R+ + FR GGV D + + +R+F+ + RL Sbjct: 162 AFTPIMYAFDDREMLLDLLQLMTGSRLTYSSFRFGGVYTDASPAFVQGVRQFIPHLRSRL 221 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y +N IL+ R + V +G +G R +GI +DVR+A PYS Y+ FD Sbjct: 222 PMYTALVTENIILRRRIEEVGVIPQDMVTRYGASGPVARGSGIAYDVRRAEPYSVYDRFD 281 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 +EIPV R M+++ E+ QSLRI+EQ + N+P+G Sbjct: 282 YEIPVRHEEC-SMARYMVRMAEIEQSLRIVEQAIENLPDGEHM----------------- 323 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 H +PA ES+ +E +G ++ SDG YR ++R P F++L Sbjct: 324 ------HPKAPKPSFKLPAGESYFAVEGARGKIGVWIASDGGKTPYRVKLRAPGFSNLAL 377 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 RG+L++D + LGS+D V+ ++DR Sbjct: 378 FAECARGTLLADAVAILGSLDMVIPEIDR 406 >UniRef50_D2PDB9 NADH dehydrogenase (Ubiquinone) n=10 Tax=Sulfolobaceae RepID=D2PDB9_SULIS Length = 410 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 126/384 (32%), Positives = 198/384 (51%), Gaps = 2/384 (0%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 LN+GP HP + G RI ++L+G+ I D D+GY HR EK+ E +++ IP +R Sbjct: 29 ELNVGPQHPGS-GHMRIFVKLNGDIIEDVDLDVGYVHRTVEKLSENRNYMHLIPLVERPA 87 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 L + Y++AVEK+ G+ VP+R +R +E+ RI SHL + +G T Sbjct: 88 ILDSIHMNLGYIIAVEKILGVDVPERAQYLRSFAAEVNRIASHLYGLGILSIFLGHSTGF 147 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 + F DR+ ++EA+TG R+ ++ GGV D+ + + + + + +RL ++K Sbjct: 148 MWGFGDREVWVTILEALTGARVTNSYVIPGGVRRDISQEIKDMTLKAISYQRRRLEDWKK 207 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 N ++ R + V + A++WG G LRA+G+ +DVRK PY Y+ DFEIPV Sbjct: 208 IFFYNPSIRARLENVGVMSKENAIKWGAVGPNLRASGVYYDVRKIEPYGAYDKLDFEIPV 267 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 D R ++++EE+ QS+RILEQ + N+PEG +D PP Sbjct: 268 YKE-GDGLARGLVRLEEIEQSMRILEQIIKNIPEGNILSDRFFKQIPPTRLKKYWETYRR 326 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 P E+ +EA +G YY+ SDGS YR R+ TPS+ + Sbjct: 327 IVLPGYYASFRPPKGEAISRVEAGRGELVYYVVSDGSPKPYRLRMITPSYRSIYVFKELC 386 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 +GS +DL+ GS+D+ + DR Sbjct: 387 KGSRYADLVSIYGSLDYFPPEADR 410 >UniRef50_A1ALP2 NADH-quinone oxidoreductase subunit D n=1 Tax=Pelobacter propionicus DSM 2379 RepID=NUOD_PELPD Length = 403 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 142/404 (35%), Positives = 217/404 (53%), Gaps = 1/404 (0%) Query: 193 LTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGA 252 + +K T + + + +N+GP+HP+ HG +I+ LDGE + GY HRG Sbjct: 1 MEYKSPVRSNLEQTADPNHVLVNMGPSHPATHGTIQIIAALDGERVAKADIHCGYLHRGF 60 Query: 253 EKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRI 312 EK E ++H IP+TDR+ Y N YV VEKL GI + R +R +L+E R+ Sbjct: 61 EKESEHHTYHKIIPFTDRLNYCSALNNNFAYVEGVEKLLGIELTPRCIYLRTLLAEYNRV 120 Query: 313 NSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGW 372 H+ ++ + ++GAMT + T R I++ + +TG R+ ++ R+GG+ +DLP GW Sbjct: 121 ADHVTCVAATVMEMGAMTAFLYLMTIRDYIFEHLNQLTGARLTYSFARVGGLKNDLPDGW 180 Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 L E L + K +N I R++ V A + AL WG TG LR+TG Sbjct: 181 LERLEEILQFTEKYCGRIHGLLDRNRIFIDRTRDVGAMSPEHALNWGYTGPILRSTGAKI 240 Query: 433 DVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD 492 D+RK PY Y + DFE+PVG D Y R +++ E+ +S+ ++ QC+ +P+GP D Sbjct: 241 DIRKDNPYLAYADLDFEVPVGIK-GDNYDRYYVRMREIDESISMVRQCMKKLPDGPVNID 299 Query: 493 HPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMS 552 P K++ IE LI+HF V G +PA E + EA G +YL SDGS Sbjct: 300 DRRIMYPTKDKVYTKIEYLISHFKLVIDGIQVPAGEIYVSHEAPNGELGFYLISDGSGRP 359 Query: 553 YRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Y+ VR+PSFAH+ + + G V+D+I GS++ + + DR Sbjct: 360 YKLHVRSPSFAHMGGMHTLLEGYQVADVIATFGSMNMIGGECDR 403 >UniRef50_B9L625 NADH-ubiquinone oxidoreductase n=3 Tax=Epsilonproteobacteria RepID=B9L625_NAUPA Length = 549 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 140/546 (25%), Positives = 241/546 (44%), Gaps = 33/546 (6%) Query: 60 LKKLPKPYVMLFDL--HGMDERLRTHREG-LPAADFSVFYHLISIDRNRDIMLKVALAEN 116 LK ++ DL G+ + V Y L + +++ LKV + + Sbjct: 28 LKNKDDLLNVIKDLKQAGVKTCSTVSPTDFIDENKIEVNYFLEDLFGKKNVWLKVDIERD 87 Query: 117 --DLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG-HPLRKDYPARA 173 + + + T L P+ANW+E E + FG+ F GHP+LR ++ + + G P RKD+ +A Sbjct: 88 LENCEIDSITPLMPSANWHELEAYSTFGVKFKGHPDLRYFLISRDYYGKFPFRKDFDWKA 147 Query: 174 TEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQL 233 E + + + E E+ G + LN GP HP++ G R+ + Sbjct: 148 HEENLIQNINDITEEYFEEYEEHEEKLGHEG-----SRTVLNWGPTHPAS-GPIRLKVYT 201 Query: 234 DGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGI 293 +GE I PDIGY R E + ER+ + I +RI ++ + Y AVE++AG Sbjct: 202 NGENIEKIEPDIGYVWRALEHLAERKDFIGTIVAVERICFMDNPNPMICYSQAVEEIAGK 261 Query: 294 TVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFR 353 + + +RV+L E RI SHL+ + F +G T + + R+ D++E +G R Sbjct: 262 EITEFAKYMRVILGETGRIASHLISLGGFFGTMGLHTFMMWCLDIREYFLDVLEDYSGAR 321 Query: 354 MHPAWFRIGGVAHDLPR--GWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYG 411 + A GGV + L W + + + A ++N ++ R++G + Sbjct: 322 IATACVEPGGVRYPLNDYKAWFEGINKAIKKFEDTKADITDIFMKNPLMNTRAKGNGVFT 381 Query: 412 AKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELR 471 + E+ G RA+G DVR PY+ Y+ + E D R+ + +EL Sbjct: 382 LDDVAEYYLAGPIARASGAKIDVRIDEPYAAYDKLEMEYATCEN-GDARDRLYIIFKELE 440 Query: 472 QSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQ 531 Q++ +++Q + + EG + P K+ V MPA E+ Sbjct: 441 QAMDLIKQAMAKIEEGIEAGEMD----PKKDH-------------LVKMPKRMPAGEAVS 483 Query: 532 MIEATKGINSYYLTS-DGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFV 590 IE +G +L + + ST YR +++ PS H + +RG +SD+ + GS+ Sbjct: 484 RIEWARGEILMHLVTQEKSTSPYRLKIKAPSVNHTMMLDKLLRGKTLSDIPLLYGSMHIC 543 Query: 591 MSDVDR 596 D+DR Sbjct: 544 QGDLDR 549 >UniRef50_B5Y915 EchE n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y915_COPPD Length = 360 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 113/385 (29%), Positives = 187/385 (48%), Gaps = 27/385 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 LGP HP+ I LQL+GE +VD IG+ HR EK ++++ + +R Sbjct: 3 YKFPLGPYHPAFEEGEYIELQLEGEMVVDAEIKIGFIHRAIEKSATKRTFIRDLGLVERT 62 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + Y LAVEK AG+ VP+R IRV+ +EL RI+SHL+Y+ +G T Sbjct: 63 CGICSFHHSWAYCLAVEKAAGLEVPERAEYIRVLTAELERIHSHLMYLGAMAHKMGFDTL 122 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 F ++ R+ + D++E ++G R++ A +GGV D+ ++ L+ + + Sbjct: 123 FMFTWSGREAVMDMLELLSGNRVNYAINTLGGVRRDVDESISSQIKAALETLEDLGLKLK 182 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 ++ + R++ V KEA G G R +GI D+RK PY+ Y DF++ Sbjct: 183 DTWSKDASILARTKNVGIVSRKEAHLLGVVGPTARGSGIREDLRKTAPYAVYPLLDFDLV 242 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 V D ++R ++V E+ +S++I+ Q L+ MP G K P+ P + Sbjct: 243 VLDD-GDVWSRTFVRVLEVLESIKIIRQVLDKMPAGQIKNPKPVLKIEPND--------- 292 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 +EA +G +Y+L +DG+ R ++RTP+ +L Sbjct: 293 -----------------VIGRVEAPRGELAYHLITDGTDKPGRLKIRTPTLINLPASEHM 335 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 +RGS ++D V +G ID MS +DR Sbjct: 336 MRGSNLADAPVIVGHIDPCMSCMDR 360 >UniRef50_C2BU22 NADH dehydrogenase (Quinone) n=4 Tax=cellular organisms RepID=C2BU22_9ACTO Length = 457 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 149/430 (34%), Positives = 221/430 (51%), Gaps = 22/430 (5%) Query: 188 LEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGY 247 E + + + D + +NLGP HPS HG R++++L+GE + DC GY Sbjct: 29 PEFSVHDGEWSAMSADLESAHNDRIAVNLGPVHPSTHGVLRVIVELEGETVKDCRLGTGY 88 Query: 248 HHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVM 305 H G EK E ++++ + Y R++Y+ +E+ + LAVEK G+T VP R + IRV+ Sbjct: 89 LHTGIEKSMEYRTYNQGVAYCSRMDYVAPFFSEVAWCLAVEKALGVTDQVPRRASEIRVL 148 Query: 306 LSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA 365 L EL RI SHL+ + T ++GA T + F R++I + E ITG RM+ + R GGV+ Sbjct: 149 LMELNRIASHLVAVGTGANELGATTMLTTGFRGREEILRIFEHITGLRMNNTYMRPGGVS 208 Query: 366 HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGL 425 +DL ++RE L + + + + + N I GR + V + TG L Sbjct: 209 NDLLDDTIDMIREKLPLVKRDIGEMQDLIMANPIFIGRMKNVGWLPLSTMMALSLTGPCL 268 Query: 426 RATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP 485 RA G+ D+RK +PY GYE + F++P SDCYTR ++ EE+ QSLRI+ Q L+ + Sbjct: 269 RAGGLPLDMRKLQPYCGYEAYTFDVPT-RDHSDCYTRTEVRFEEMYQSLRIVYQVLDRLE 327 Query: 486 EG---PFKADHPLTTPPPKERT----------------LQHIETLITHFLQVSWGPVMPA 526 + P P P K +E LI HF V+ G +P Sbjct: 328 QSEGEPVMIADPKFAYPSKLTIGADGQGQDPEHVSHILGHSMEELIHHFKLVTEGFRIPP 387 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 + + +E KGI +L +DG T YR R PS+A+LQ G L+SDL+V +GS Sbjct: 388 GQVYAQVEHAKGIQGVHLVTDGGTHPYRAHFRDPSYANLQSASMMCEGGLISDLVVSIGS 447 Query: 587 IDFVMSDVDR 596 ID V VDR Sbjct: 448 IDPVFGGVDR 457 >UniRef50_A1AUU6 Ech hydrogenase subunit E n=3 Tax=Bacteria RepID=A1AUU6_PELPD Length = 409 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 107/385 (27%), Positives = 193/385 (50%), Gaps = 28/385 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + + +GP HP+ + + GE+IV +GY+HRG EK E +S+ + +RI Sbjct: 4 VTIPIGPQHPALKEPANFSITVTGEKIVTTSMRLGYNHRGIEKACEERSYLQCLYLLERI 63 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + Y+ AVE++AG+T+P R N IR ++ EL RI+SHLL++ ++G T Sbjct: 64 CGICSHTHSTAYIQAVEEIAGLTIPPRANYIRSLVGELERIHSHLLWLGVAGHEIGFDTL 123 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + +++ DR+ + D++ + G R++ +GGV D+ ++R ++ + +R Y Sbjct: 124 LMYSWRDRELVMDILAELGGNRVNYGINTLGGVRRDITPEQIEMIRNSVNTLEERTKYYI 183 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + A + L R GV ++AL G LRA+ +D D+R+ PY+ Y + DF + Sbjct: 184 EVATEEPTLAARLAGVGYLSHEDALLLSAVGPTLRASNVDRDIRRDDPYAAYGSLDFRV- 242 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 + D Y R +++V EL +S R++ Q LN +PEG P Sbjct: 243 ITDDHCDVYGRTLVRVGELMESFRMIRQILNELPEGEVSVKAPR---------------- 286 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 +PA E+ EA +G +Y+ ++G+ R +VR +FA++Q + Sbjct: 287 -----------KIPAGEACSRYEAPRGECFHYIRANGTDKPERVKVRASTFANIQAVAKM 335 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 + + ++D+ + + +ID S DR Sbjct: 336 MENNNLADVPIIVAAIDPCFSCADR 360 >UniRef50_Q1AVI6 NADH-quinone oxidoreductase subunit D n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=NUOD_RUBXD Length = 396 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 138/388 (35%), Positives = 209/388 (53%), Gaps = 27/388 (6%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 + + +N+GP HP+ HG R++L+LDGE IV C P +GY HR EK+ E +++ + IP TD Sbjct: 35 ETLDMNMGPQHPAMHGLLRLILELDGETIVRCDPVMGYLHRCQEKIAENRTYPAVIPLTD 94 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R++Y NE Y LAVE L G+ +P R IRV++ EL RI SHL I + ++GA Sbjct: 95 RLDYFANMHNEHGYCLAVEDLLGVEIPPRAEYIRVLMCELMRIASHLPSIGFLLLELGAF 154 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA- 388 TP+ +AF +R++I + EA+TG RM + RIGGV DLP + E+++ + KR+ Sbjct: 155 TPILYAFRERERIQNFFEAVTGARMMFHYIRIGGVKADLPPDIPEKIWEYVEGLEKRIKP 214 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 + N I R++G++ +EA+E G TG LR TG+ FDVR+ PYS Y DF Sbjct: 215 DFIDLIEGNEIFIERTRGISRLTQEEAIELGLTGPPLRCTGVAFDVRRDYPYSVYPELDF 274 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 E+ V D ++++E+ +S++I+ QCL MPEG D P Sbjct: 275 EV-VTDTAGDVEASYRVRIKEVYESIKIIRQCLEKMPEGEVMGDVGRRVRP--------- 324 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI 568 P E F +E +G + ++ SDGS YR R PSF ++Q + Sbjct: 325 ----------------PEGEGFGRVEGPRGEFAVHVVSDGSDTPYRVHYRDPSFVNMQLL 368 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G + D++ +G +D V D+ Sbjct: 369 QEKMPGHYLPDIMPIMGLVDPVSGGWDK 396 >UniRef50_C1AB36 NADH-quinone oxidoreductase chain D n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB36_GEMAT Length = 412 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 136/404 (33%), Positives = 213/404 (52%), Gaps = 1/404 (0%) Query: 193 LTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGA 252 L G +D + +N+GP+HP+ HG +I+ +LDGE+++ GY HRG Sbjct: 10 LPPIANPVRAAFGPSRDDTVVVNIGPSHPATHGTVQIIAELDGEKVLRTDVHCGYLHRGF 69 Query: 253 EKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRI 312 EK E +WH+ IPY DR+ Y +N Y VE+L GI + R +R +LSE R+ Sbjct: 70 EKECEDHTWHNLIPYVDRLNYCSALINNFAYCDGVEQLMGIEITPRTKYLRTLLSEYSRL 129 Query: 313 NSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGW 372 HL ++ + ++GAMT + T R +Y+ + A+TG R+ ++ RIGG+A D+P GW Sbjct: 130 ADHLTCVAASLMELGAMTAFLYLVTVRDSMYEHLAALTGARVTYSYGRIGGLAADVPDGW 189 Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 + L E L + +N I R + V +AL WG TG LR+TG Sbjct: 190 FKRLGEILRDYEQYAERVHGLVDRNRIFIDRLRNVGTINTADALHWGFTGPVLRSTGAKR 249 Query: 433 DVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD 492 D+RK PY Y DF++PVG D Y R +++ E+ +S+ ++ Q ++ +P+GP D Sbjct: 250 DLRKDTPYLAYAELDFDVPVG-IFGDNYDRYYVRMREMDESVYMIRQLMDMIPDGPINVD 308 Query: 493 HPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMS 552 P K+ IE+LI HF V GP +PA +++ E G +Y+ S G + Sbjct: 309 DRRCVFPEKQLVYSEIESLINHFKLVMEGPAVPAGDAYVAHEGANGELGFYIVSTGEGVP 368 Query: 553 YRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Y+ VR+PSF H+ + G ++D++ GSI+ + + DR Sbjct: 369 YKVHVRSPSFVHMGGAHRMLDGYQLADIVTSFGSINMIGGECDR 412 >UniRef50_A1RZ50 NADH dehydrogenase (Ubiquinone) n=6 Tax=Archaea RepID=A1RZ50_THEPD Length = 404 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 130/389 (33%), Positives = 194/389 (49%), Gaps = 3/389 (0%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 +E L +GP HPS+ G R +++L G+ IV PDIGY HR EK+ E + IP Sbjct: 19 DESVYELFIGPQHPSS-GHMRFIVRLQGDVIVSVDPDIGYVHRTMEKLAEGREAIKAIPL 77 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R+ + + V A+E+L + P R +R +LSE+ RI SHL + + Sbjct: 78 LERLTIIDSHNATVGLVTAMERLLDVEPPPRALYLRTLLSEINRIASHLYGMGIAGIMLN 137 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T +AF DR+ L E +TG R+ + GGV DLP+G+ + +M +RL Sbjct: 138 HSTMFMWAFGDREVWLQLAEELTGARLTHTYSVPGGVRRDLPQGFGEKFEKAARYMERRL 197 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y + L+N + R +GV EA G G LRA+G+ +D R A Y Y++ + Sbjct: 198 QDYMRIFLENPQVVARYEGVGVLKKSEASRLGVVGPNLRASGVKYDARLADDYGAYKDLE 257 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 FE+P DC R++++VEE++QS+ I+ Q L MP+GP ++ L PPK R Sbjct: 258 FEVPT-REEGDCMARMLVRVEEIKQSISIIRQVLRKMPDGPILSEKYLKLLPPKTRERVL 316 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 E + F + +PA E+ E G Y++T DGS YR RV TPSF ++ Sbjct: 317 QEGRV-KFPALFASLKLPAGEAVARAEMGHGEIFYHITGDGSAKPYRLRVVTPSFRNVIL 375 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G D GS+D+ + DR Sbjct: 376 FRYLAPGHRFMDFPAIYGSLDYFPPEADR 404 >UniRef50_A9G9T3 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=Myxococcales RepID=NUOD2_SORC5 Length = 388 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 149/411 (36%), Positives = 219/411 (53%), Gaps = 27/411 (6%) Query: 190 MEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHH 249 M + F + G + G E +D M LN+GP+HPS HG R V+ DGE I VPD+GY H Sbjct: 1 MSQVIFSVDRGGAEPGAEMDDEMTLNMGPHHPSTHGVLRFVISTDGEIIRKAVPDVGYLH 60 Query: 250 RGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSEL 309 R EK+GER ++ ++PYTDR++Y+ + A EKL GI VP R +RV+ EL Sbjct: 61 RSIEKIGERCTYSGFMPYTDRVDYIAAMFANEAWASACEKLMGIEVPKRAQYLRVISCEL 120 Query: 310 FRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP 369 RI SH++ + DVGA+TP +A +R+ I D +E + G R+ + RIGGV+ D+P Sbjct: 121 NRIGSHMIALGAMAMDVGAVTPFPWALREREYINDFIEELCGARLTFNYHRIGGVSFDMP 180 Query: 370 RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATG 429 +GW ++ +LD + +++ N I R VA A+EA +WG G LR +G Sbjct: 181 KGWADKVKHWLDRFEPIMVEFDRLISLNDIFIKRLANVAVVTAEEAKDWGLVGPNLRGSG 240 Query: 430 IDFDVRKARPYSGYENFDFEIPVGGGV----SDCYTRVMLKVEELRQSLRILEQCLNNMP 485 + +D+RK YS Y +F++PVG G DC+ R ++VEE R+S +IL Q L+ + Sbjct: 241 VKWDLRKEDAYSVYPELEFDVPVGRGRYGTVGDCWDRFYVRVEECRESAKILRQALDKID 300 Query: 486 EGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT 545 E P D L P K R P E++ IE+ +G Y+ Sbjct: 301 EHP--EDDILGKLPKKMR---------------------PDGEAYARIESARGDMGCYVI 337 Query: 546 SDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G+ +YR R RT SF + I A G ++DL+ + S D V ++DR Sbjct: 338 GRGAEEAYRARFRTGSFTAMAMIEAKSPGLFLADLVALIASFDVVAPEIDR 388 >UniRef50_A0B812 F420H2 dehydrogenase subunit C n=6 Tax=Archaea RepID=A0B812_METTP Length = 390 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 135/414 (32%), Positives = 210/414 (50%), Gaps = 28/414 (6%) Query: 185 KQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPD 244 K + E + + +++ M +++GP H G F + L ++GE + D Sbjct: 3 KAGVVPERPKYPTFREREEAEIKSDSEMIMHMGPQHAIVPGPFLLDLLIEGERVKKAFLD 62 Query: 245 IGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRV 304 +GY H+G EK+ E +++ I YTDR+ YL N Y AVEKL GIT P+R IRV Sbjct: 63 VGYIHKGIEKIMENRTYLQGIVYTDRMCYLASITNNEAYCGAVEKLLGITPPERAQYIRV 122 Query: 305 MLSELFRINSHLLYISTFIQDVGAMT--PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIG 362 +L+EL RI SHLL F+ +GA T P + DR+ I L+E+ITG R+ + R G Sbjct: 123 ILAELSRIQSHLLGTGEFLTLLGAATYSPFQYMIIDREDIVYLMESITGARITHTFVRFG 182 Query: 363 GVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTG 422 GV +DLP G+ R L M +R Y + I R +G+ +A G +G Sbjct: 183 GVRNDLPDGFADKARPILKRMRERTEEYMDLLHSDPIYTRRMRGIGVLSPGDARRLGVSG 242 Query: 423 AGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLN 482 LRA+ +D+R+ P Y + DF++ V D RV +++EE+ +S+ I+EQCL+ Sbjct: 243 PPLRASDTPYDMRREDPILVYPDLDFKV-VTRKAGDAEARVEVRLEEILESIHIIEQCLD 301 Query: 483 NMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSY 542 +P+GP + P P E++ +E +G + Sbjct: 302 QIPDGPIQEKLPKKIKPE-------------------------PGEAYYRVEDPRGEMGF 336 Query: 543 YLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Y+ SDGS YR +VR P +A++Q +P + G+ V+D++ GS+D S+VDR Sbjct: 337 YVVSDGSEKPYRVKVRGPVYAYMQALPPLLEGAYVADVVAIAGSMDACTSEVDR 390 >UniRef50_Q8U0Z6 Mbh12 membrane bound hydrogenase alpha (NADH dehydrogenase) n=3 Tax=Pyrococcus RepID=Q8U0Z6_PYRFU Length = 427 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 115/399 (28%), Positives = 194/399 (48%), Gaps = 26/399 (6%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + E ++ + GP HP + ++ LDGE IV+ +GY+ RG + +G R+++ Sbjct: 1 MKKVEYWVKIPFGPIHPGLEEPEKFIITLDGERIVNVDVKLGYNLRGVQWIGMRRNYVQI 60 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 + +R+ + + YV AVE++AGI VP+R IRV++ EL RI+SHLL + Sbjct: 61 MYLAERMCGICSFSHNHTYVRAVEEMAGIEVPERAEYIRVIVGELERIHSHLLNLGVVGH 120 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 D+G T + + R+++ D++EA++G R++ + IGGV D+ RL+ + + + Sbjct: 121 DIGYDTVLHLTWLARERVMDVLEAVSGNRVNYSMVTIGGVRRDIGEKQKRLILDMIKYYR 180 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 + L E L ++ ++ R + VA K A+E G G R +GI D R + Y Sbjct: 181 EVLPQIEDVFLHDSTIEARLRDVAVVPKKLAIEMGAVGPTARGSGIKEDSRWSEQLGVYP 240 Query: 445 NFDFEIPVGGG------VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 + + D Y R+ +++ EL SL +LE L+ MPEG K Sbjct: 241 DLGIKPVTPEDVTGEKARGDVYDRMAVRIGELWMSLDLLEHALDQMPEGKIKTF------ 294 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS-DGSTMSYRTRV 557 PK+ L V+ ++ E EA +G +Y+ G R + Sbjct: 295 -PKDNIL------------VAKLKLLGDGEGIGRYEAPRGELVHYVRGQKGRDGPVRWKP 341 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R P+F +L I A+ G+ ++DL+V + SID +S DR Sbjct: 342 REPTFPNLFTIAKALEGNELADLVVAIASIDPCLSCTDR 380 >UniRef50_B6YU98 Membrane bound hydrogenase, NiFe-hydrogenase large subunit 2 n=5 Tax=Euryarchaeota RepID=B6YU98_THEON Length = 426 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 110/399 (27%), Positives = 188/399 (47%), Gaps = 26/399 (6%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + E ++ + GP HP + +L LDGE IV+ +GY+ RG + + R+++ Sbjct: 2 TKKVEYWIKIPFGPIHPGLEEPEKFILTLDGERIVNVDVKLGYNLRGLQWIAYRRNYVQI 61 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 + +RI + + Y AVE+ AGI VP+R IR ++ EL R++SHLL + Sbjct: 62 MYLAERICGICSFSHNHTYTRAVEEAAGIEVPERAEYIRAIIGELERVHSHLLNLGVLGH 121 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 D+G T + + R+++ D++EAI+G R++ + IGGV D+ RL+ + + + Sbjct: 122 DIGYDTVLHLTWLARERVMDVLEAISGNRVNYSMVTIGGVRRDIDEKGKRLILDMIKYYR 181 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 + E+ L + ++ R + A + ALE G G RA+G+ D R + Y Sbjct: 182 SIMPQIEEVFLHDPTIEARLRDCAVISKRVALEQGAVGPTARASGLKVDARWSERLGVYP 241 Query: 445 NFDFEIPVGGG------VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 + + + D + R +++ E+ QSL +LE L+ MPEG K Sbjct: 242 DLGVKPVMPQDVTGEKPHGDVFDRAAVRIGEIYQSLDMLEHALDQMPEGKIKTF------ 295 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS-DGSTMSYRTRV 557 PK+ L V+ +M E EA +G +Y+ GS R + Sbjct: 296 -PKDNIL------------VAKLKIMVDGEGIGRYEAPRGELVHYVRGKKGSDKPLRWKP 342 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R P+F +L + + G V+D ++ + SID +S DR Sbjct: 343 REPTFPNLFAVAKGVTGDQVADFVLAVASIDPCLSCTDR 381 >UniRef50_D2LAG1 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2LAG1_9DELT Length = 409 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 107/408 (26%), Positives = 185/408 (45%), Gaps = 25/408 (6%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L GP HP + L ++ E +++ +P +GY HRG E++ E + ++ I +R+ Sbjct: 4 TILPFGPQHPVLPEPLHLKLTIENETVIEALPTLGYVHRGLERLCEIRDFNQMIQIVERV 63 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + C++ + Y VE++ G+ VP R +R + EL R++SHLL++ F G + Sbjct: 64 CGICSCLHALCYCEGVEQIMGVEVPRRAKYLRTIWGELHRMHSHLLWLGLFADAFGFESL 123 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + R++I D++EA G R+ + IGGV DL + + L K + + Sbjct: 124 FMQFWRVRERIMDIMEATCGNRVVVSVNVIGGVRRDLSPEQCLWIEQQLALSEKEIKQLQ 183 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 L + +K R+ G+ ++A + G G LR +G D R+ Y+ ++ FE P Sbjct: 184 TTILNDYTVKKRTVGIGVLSKEKAYQLGAVGPMLRGSGWAQDARQT-GYAAFDELGFE-P 241 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP--------EGPFKADHPLTTPPPKER 503 V D Y R ++ E QS+ I+ + MP EG + D P + R Sbjct: 242 VVEYGGDSYARCAVRFRETLQSIDIVRLAIARMPAGETSVNVEGAMEDDTPRPVVAGERR 301 Query: 504 TLQHIETLITHFLQVSWGPV---------------MPANESFQMIEATKGINSYYLTSDG 548 + H + P P E+ +E +G YY+ +G Sbjct: 302 DIMQAYNRDKHHKITAAPPPNLDLPTGLVAAKVKGKPDGEAVTRVEQPRGELMYYIKGNG 361 Query: 549 STMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 S R R+RTP+FA++ + A + G ++D+ V + SID +S +R Sbjct: 362 SKNMERVRIRTPTFANIPPLLAILPGCELADVPVIVLSIDPCISCTER 409 >UniRef50_B3VS74 NADH-ubiquinone oxidoreductase chain 49kDa n=4 Tax=Bacteria RepID=B3VS74_DESVM Length = 358 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 106/388 (27%), Positives = 183/388 (47%), Gaps = 30/388 (7%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 + GP HP + L ++ E IV+ +P +GY HRG E + + ++ + Sbjct: 1 MSRTIIPFGPQHPVLPEPLHLKLVVEDETIVEAIPALGYVHRGLETLASIRDYNQMVYIV 60 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +R+ + C++ M Y +E + + VP R +RV+ SEL RI+SHLL++ F G Sbjct: 61 ERVCGICSCIHAMCYCQGLETMMNVEVPSRAKYLRVIWSELHRIHSHLLWLGLFADGFGF 120 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 + + R+++ D+ EA G R+ + +GGV DL + R + + LD + K L Sbjct: 121 ESLFMQFWKIRERVMDINEATAGNRVVISVNVVGGVRRDLDKTQQRWILDELDKLEKELR 180 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 K L + +K R+ GV A++A++ G G LR +G+ D R+ Y+ ++ DF Sbjct: 181 QLMKTMLDDYTVKKRTVGVGVLTAEQAIQLGAVGPTLRGSGVAQDARQL-GYAAFDELDF 239 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 E PV D + R ++ E QS+ I+ Q ++ +P+ A P Sbjct: 240 E-PVTSPEGDSWARSKVRFMETLQSMDIVRQAISRLPDSELAAKVPGK------------ 286 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI 568 P E +E +G YYL +GS R R+RTP+FA++ + Sbjct: 287 ----------------PTGEVVCRVEQPRGELLYYLKGNGSKNMERVRIRTPTFANIPPL 330 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 A + G+ ++D+ + +ID +S +R Sbjct: 331 LAMLPGAQLADVPIAALTIDPCISCTER 358 >UniRef50_C7NUN7 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN7_HALUD Length = 419 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 110/392 (28%), Positives = 189/392 (48%), Gaps = 22/392 (5%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 +E+ + +GP HPS L +DGE I + Y+HRG E+ +S+ Sbjct: 1 MSEDVSGTEIPVGPQHPSLKEPANFTLTVDGEVITGADLKLSYNHRGIEQAVLSKSYLEN 60 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 I +RI + + + + VE L + VP R N IR ++ EL RI+SH+L++ Sbjct: 61 IYLLERICGICSHAHTTSFAIGVEDLLDLDVPRRANYIRTLIGELERIHSHMLWLGVAGH 120 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 ++G T +A+ DR+ + DL+E ITG R+H + IGGV DL + E +D + Sbjct: 121 EIGFDTLWQYAWRDREIVLDLLEEITGNRIHYSINTIGGVRQDLTAEQRETVLEKMDELE 180 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 +R+ Y + ++ R + V A+ A E+ G RA+G+ DVR+ PY+ Y+ Sbjct: 181 ERIDFYLETVPNEETVRMRCENVGTVSAELAREYCAAGPVGRASGLPVDVRRDAPYAAYD 240 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 DF++ + D R +++ E+ +S+ I+ Q ++P+G KA +P P + Sbjct: 241 EMDFDV-ITDTAGDLLARTTVRIREIAESISIIRQAAADIPDGDLKA-----SPKPVQAL 294 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 L I P ++ EA +G +Y+ +DG+ R +R P+ A+ Sbjct: 295 LAQI----------------PEDDVVSRYEAPRGELIHYIRADGTDTPERVHIRVPTLAN 338 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + A+RGS ++D + + ID +S R Sbjct: 339 WPTVVEALRGSYIADTPIVVAGIDPCISCTSR 370 >UniRef50_Q609T9 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T9_METCA Length = 527 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 117/496 (23%), Positives = 182/496 (36%), Gaps = 46/496 (9%) Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW- 160 ++L+ L +P+ T FP A ER T DL G+ F GHP+ RR + Q W Sbjct: 75 KSGDYLLLRTVLPPGRTGLPSHTPHFPGAARPERHTRDLLGLKFIGHPDDRRWVRHQAWG 134 Query: 161 -KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPN 219 + PLR D+P A+T +G + + +GP Sbjct: 135 EREFPLRPDFPLAGQP---------------PAVTAPDRSYGF-ASAHGPEVNEIPVGPV 178 Query: 220 HPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 H GE +++ +GY H+G EK+ + R+ + Sbjct: 179 HAGIIEPGHFRFLALGETVLNLEERLGYVHKGIEKLAVGRDPEGLARLAGRVSGDTTVGH 238 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDR 339 A+E AG+ P+R +R + E R+ +HL I D R Sbjct: 239 AWAACQAMEHAAGVAPPERALWLRAIFIERERVANHLNDIGAICNDTAFAFGHSQFSRLR 298 Query: 340 QKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTI 399 + G R+ GGVA DLP + + + L + ++TI Sbjct: 299 ELWLRDNLRWFGHRLLMDRIVPGGVAVDLPAEATSAMPAAMAALRSELEELKPILDESTI 358 Query: 400 LKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDC 459 + R G + E G G RA GI DVR+ P++ Y+ + V G D Sbjct: 359 FQDRVVGAGVLSERIVRELGCLGYVARACGIGRDVRERAPHAPYDRLGVK-AVTRGDGDV 417 Query: 460 YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVS 519 R+ ++ EEL SL IL+QCL + GP +AD Sbjct: 418 AARLYVRYEELLASLDILDQCLRRIEPGPLRAD--------------------------- 450 Query: 520 WGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSD 579 W E ++E +G + Y+ DG+ R R PS + + I G++V D Sbjct: 451 WRTPPANAEGLGLVEGWRGEIATYVRFDGAGSIVRFFPRDPSVFNWPALEKLILGNIVPD 510 Query: 580 LIVYLGSIDFVMSDVD 595 + S++ S D Sbjct: 511 FPLCNKSVNGSYSGHD 526 >UniRef50_B1ZUJ2 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=Bacteria RepID=NUOD2_OPITP Length = 399 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 139/389 (35%), Positives = 210/389 (53%), Gaps = 25/389 (6%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + +NLGP HP+AHG R+++++DGE + + P IGY HR EKMGE ++W ++P Sbjct: 36 PHETFTINLGPQHPAAHGVLRVLMRMDGEWVENAEPVIGYIHRMHEKMGENRTWAKFLPN 95 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 T RI+YL +V VE+ I VP+R IRV+ SEL RI SH ++ + D+G Sbjct: 96 TSRIDYLSAMHYTHAWVGVVERGLKIEVPERAEYIRVITSELNRIASHQVWWGALLLDLG 155 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 TP+ +AF DR+KI DL+E + G R+ ++R GG+ +D + + REF+ +M RL Sbjct: 156 GFTPILYAFDDREKILDLLEGLCGARLTYCYYRFGGLYNDADDDFLKGTREFVKYMRPRL 215 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y N IL+ R G+ A ++G TG +R +G+ +DVR+A PYS Y Sbjct: 216 KMYRDLVTDNVILRQRLTGIGPISADTCRKYGATGPVIRGSGVAYDVRRAEPYSVYPKLQ 275 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F+IP D R +++++E+ +SL I+EQCL+ + GPF A Sbjct: 276 FKIPTY-PECDSMARYLVRMDEMEESLNIIEQCLDLIQPGPFMAP--------------- 319 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +V +PA + +EA +G + SDG YR R+RTPSF +L Sbjct: 320 ---------KVPRVIRLPAGDYTYAVEAARGRFMVRVVSDGKENPYRARLRTPSFGNLSL 370 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 RG L+ D + +GS+D V+ D+DR Sbjct: 371 FEETSRGMLLPDALAMMGSLDLVIPDIDR 399 >UniRef50_A7I7D0 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=6 Tax=cellular organisms RepID=A7I7D0_METB6 Length = 526 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 119/502 (23%), Positives = 197/502 (39%), Gaps = 48/502 (9%) Query: 96 YHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIM 155 Y L + + +L ++ A N + +FP+A W ERE D++GI F+G + RR++ Sbjct: 70 YILRYVFSHAGSILVLSRALNRKQATSIATIFPSATWPERECRDMYGIKFEGAFDTRRLV 129 Query: 156 MPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMF 213 + +T +PL K + + +P K T P E R + Sbjct: 130 LHETCPAGFYPLEK-----SVKNAPVATKK----------TVPPAEEYPFRTVSGDGVYQ 174 Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + +GP H + GE + + + Y HRG EK+ E + + + + + Sbjct: 175 VPVGPVHAGIIEPGHFRFSVIGETVFNLEIRLFYTHRGIEKLAEGKDPAACVRVAEAVSG 234 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 N +A+E+L+GITVPDR IR +L E RI SHL +S + DV Sbjct: 235 DESAANATGLCMAIERLSGITVPDRAWHIRTVLCESERICSHLGDLSGMLTDVAFALGAS 294 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 R++ + E ++G R GG++ D+P REFL K + Sbjct: 295 HFAVLREEFFREQEKLSGSRFLRGMILPGGISRDIPVETLARYREFLARFAKEFRAGLAI 354 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 L + R TG RA+G DVR PY Y+ F +P Sbjct: 355 VLSTPSVIDRFTQTGIIRKPLLGPLNITGPVARASGSGRDVRVDSPYGMYDRF-IPVPHP 413 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D R +K E+ SL ++E+ + MPEGP + Sbjct: 414 LNDGDVLARFTVKAAEVLDSLSLIEKVIAGMPEGPVISADG------------------- 454 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 + + ++E +G N ++ +R +VRT S+ + I A Sbjct: 455 ----------VGDGAALALVEGPRGENLCWVEIR-EGRVFRYKVRTASYCNWLAIEHAAP 503 Query: 574 GSLVSDLIVYLGSIDFVMSDVD 595 G++++D V S++ + D Sbjct: 504 GNIIADFPVINKSLNLSYAGTD 525 >UniRef50_B5IS38 Respiratory-chain NADH dehydrogenase, 49 Kd subunit domain protein n=1 Tax=Thermococcus barophilus MP RepID=B5IS38_9EURY Length = 409 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 108/394 (27%), Positives = 192/394 (48%), Gaps = 25/394 (6%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + ++ +GP HP+ R+ +++GE+IV G+ HRG E MG +++ + Sbjct: 2 PKTAYYIPIGPIHPALKEPIRVEAEVEGEKIVRVDVKRGFAHRGIEYMGMKRNAIQTLYL 61 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 ++RI + + +V+ EK GI P R IR +++EL RI+SH+L++ ++G Sbjct: 62 SERICGICSISHPYAFVVTAEKALGIEAPPRAQYIRPIIAELERIHSHILWLGVIAHEMG 121 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 + +F+ + R+K+ DL+E +TG R++ + + IGGV DL + +++ + + K Sbjct: 122 FDSLLFWTWKGREKVLDLLELLTGNRINYSVYMIGGVRRDLKESHIKAIKDAITYYWKFT 181 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 ++ L + + K R++GVA + AL+ G RA GI D+R+ PY Y + D Sbjct: 182 EQMKEIILSDPVYKARTRGVAQLSKEMALKLNVVGPVARAAGIRMDIRQDMPYDAYADID 241 Query: 448 FE--IP---VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE 502 +P VG D Y M+++ E+ QSL I+E C++N+PEG A Sbjct: 242 VRAVVPQDIVGEAKGDAYDITMVRIYEIEQSLDIIEYCVDNLPEGKILA----------- 290 Query: 503 RTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSF 562 I ++ + E+ EA +G +YL DG +V PS+ Sbjct: 291 ---------IPNYPALLAKIRRTKGEAIGAHEAPRGEVVHYLKFDGRDGPSVWKVIAPSY 341 Query: 563 AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++ + G+ V+D+ + + ID M DR Sbjct: 342 NNINSWAPLLLGAEVADIPIVVAYIDPCMCCNDR 375 >UniRef50_Q2FTW4 Membrane bound hydrogenase subunit mbhL n=3 Tax=Euryarchaeota RepID=Q2FTW4_METHJ Length = 409 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 105/391 (26%), Positives = 183/391 (46%), Gaps = 26/391 (6%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L +GP HP+ Q++GE I G HRG E MG R++ + DRI Sbjct: 8 YELPIGPIHPALKEPINFTFQMNGEVIEKVDFAPGRAHRGIEWMGMRRNPVQILHLCDRI 67 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + G + + + AVE++A I VPDR +R +++E RI SH+L+ ++G T Sbjct: 68 CGICGVHHALVFAQAVEQIADIEVPDRAYYVRTIIAEFERIQSHILWAGVAAHELGFDTL 127 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + A+ R++ D++E ITG R++ +GG D+ L + L + L Sbjct: 128 FYLAWQIREESVDVIEYITGNRVNYGIMMLGGTRRDITADMFPRLEQALQYYEGLLEKMV 187 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 L + + R + + ALE T G RA+G+ DVR PY+ Y + DF+I Sbjct: 188 NLFLNDKTIAMRCKDTGILTKRRALELATVGPTSRASGLAMDVRIDSPYAAYGDLDFDIV 247 Query: 452 VG-----GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 + G D Y R+++++ E++QS+ I+ QC+ MPEGP A+ Sbjct: 248 LPDVYNSEGNGDVYDRIIVRIFEIKQSIDIIRQCMKQMPEGPVLAEEK------------ 295 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM-SYRTRVRTPSFAHL 565 + ++ + E+F +EA +G + +Y+ +G +V+ ++++ Sbjct: 296 --------YAKLLMNLKKASGEAFARVEAPRGEDMHYVRMNGKQEAPEMWKVKASTYSNQ 347 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++G ++D+ + + SID MS DR Sbjct: 348 MAWVEILQGEQIADIPIIVASIDPCMSCTDR 378 >UniRef50_A8MBT0 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MBT0_CALMQ Length = 424 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 129/403 (32%), Positives = 206/403 (51%), Gaps = 4/403 (0%) Query: 195 FKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEK 254 F P M D + +GP HP + G RI+L+L G+ IV+ VPD GY HR EK Sbjct: 25 FLPIPKNMVEEAYKSDEYLVLIGPAHPGS-GHMRIILRLKGDYIVEAVPDPGYVHRSVEK 83 Query: 255 MGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINS 314 + E + + IP +R + + YV A+E+L + VP R +RV++ EL RI Sbjct: 84 LAETRLFVHNIPLVERPTIAESSIMDHGYVRAIEELGQLDVPPRAQYLRVIMDELSRIGD 143 Query: 315 HLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDR 374 HL +G T + F R+ I D + +TG R+ ++ GV D+ R Sbjct: 144 HLYDTGILAVFLGHSTGYMWGFGLRELIVDALARMTGARITVSFVIPSGVRWDVHPDVLR 203 Query: 375 LLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDV 434 + ++ K++ +N + R + V + ++ G G LRA G+++D Sbjct: 204 YIYNMTFFIEKKIDELGTIFTKNPVTVSRMKDVGVLTKDQCIKLGAVGPFLRACGVEYDN 263 Query: 435 RKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHP 494 R+ARPY+ Y+ ++EIPV D Y+R +++VEE+RQSL I+ Q + N+PEGP + Sbjct: 264 RRARPYAVYDQLEWEIPVADE-GDAYSRFLVRVEEIRQSLNIIRQAVKNIPEGPVIGNKL 322 Query: 495 LTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDG-STMSY 553 +T PPKER + + + + ++ G +P E+ + EA +G Y L SDG S + Y Sbjct: 323 MTRVPPKERE-KVAKDIRNYLFRLLIGLTLPEGEATTLTEAARGTLLYSLVSDGKSNVPY 381 Query: 554 RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R R+ TPS+ +L+ ++RG + DL GS + + DR Sbjct: 382 RLRMITPSWYNLKPFMESLRGYRLMDLPAIYGSWGYFPPEADR 424 >UniRef50_D2R4P3 NADH dehydrogenase (Quinone) n=3 Tax=Planctomycetaceae RepID=D2R4P3_9PLAN Length = 401 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 123/409 (30%), Positives = 202/409 (49%), Gaps = 43/409 (10%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 D M +N+GP HPS HG R+VL+ DGE + P +GY HR AEK+GE + +IPY Sbjct: 16 RTDEMLVNMGPQHPSTHGVLRLVLRTDGEIVSQVEPHLGYLHRCAEKIGENLTPRQWIPY 75 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 TDR++YL + + L VEKL G + ++ +RV+++E+ RI SHL+ + + D+G Sbjct: 76 TDRMDYLAAMNMNLGWALTVEKLLGHQISEKARHLRVIIAEMGRIASHLVGMGAYGLDLG 135 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 +P +AF +R+KI DL E G R+ ++ GG DLP+GW + EFL + Sbjct: 136 TFSPFLYAFREREKILDLFEEACGARLTYSYLTPGGATADLPKGWLQKCEEFLKQFEPVI 195 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA--RPY-SGYE 444 Y N+I R+ + A+ A+++G TG LR +G+D+D+R+ Y Y+ Sbjct: 196 QEYHALLTTNSIFVKRTAAIGIMSAEMAIDYGCTGPVLRGSGVDYDLRRDGEERYTEMYD 255 Query: 445 NFDFEIPVGGGV-----------------SDCYTRVMLKVEELRQSLRILEQCLNNMPEG 487 + FE+ V DC+ R +++ E+ QS+ ++ Q + Sbjct: 256 GYAFEVIVSRNGHYPADHDYPPVPKEAVLGDCWHRFYVRMLEVVQSIDLVRQAIER---- 311 Query: 488 PFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD 547 + + +P E++ E +G +Y+ SD Sbjct: 312 -------------------YSTASGDWGQPIKLTTKLPKGEAYLETECPRGQMGFYIVSD 352 Query: 548 GSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G+ + +R R R+ SF +L RG L++D+ +GS+D VM ++DR Sbjct: 353 GNAIPWRVRARSSSFCNLSITADLCRGCLIADVPAIVGSLDIVMGEIDR 401 >UniRef50_C6A3Z3 Membrane-bound hydrogenase MBH 2, subunit Mbh2L (NiFe hydrogenase catalytic subunit) n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A3Z3_THESM Length = 412 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 109/394 (27%), Positives = 194/394 (49%), Gaps = 26/394 (6%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 + ++ +GP HP+ R+ +++GE+IV G+ HRG E MG +++ + + Sbjct: 3 KTTYYVPIGPIHPALKEPIRVEAEVEGEKIVKVDVKRGFAHRGIEYMGMKRNAIQTLYLS 62 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +RI + + +V+ EK GI P R IR +++EL RI+SH+L++ ++G Sbjct: 63 ERICGICSISHPYAFVIGSEKALGIEAPPRAQYIRTIIAELERIHSHILWLGVIAHEIGF 122 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 + +F+ + R+K+ D++EAITG R++ + + IGGV DL R+L++ + + + Sbjct: 123 DSLLFWTWKGREKVLDILEAITGNRINYSMYMIGGVRRDLKESHIRVLKDMITYYWEFTE 182 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 ++ L + + K R++GVA AL+ G RA G+ D+R+ PY Y + D Sbjct: 183 HMKEVFLSDPVYKARTRGVAQVSKDVALKLNLVGPTARAAGLRMDIRQDIPYDAYADIDV 242 Query: 449 E--IP---VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKER 503 + +P VG D Y M+++ E+ QSL I+E C++N+PEG A Sbjct: 243 KAVVPQDIVGEARGDAYDVTMVRIYEIEQSLDIIEYCIDNLPEGKILA------------ 290 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM-SYRTRVRTPSF 562 I +++ + E EA +G +Y DG+ +V PS+ Sbjct: 291 --------IPNYIALLNKIKKTEGEGIGAHEAPRGEVVHYFRYDGTRDGPAVWKVIAPSY 342 Query: 563 AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++ + G+ V+D+ V + ID M DR Sbjct: 343 NNINSWGYCLLGAEVADIPVVVAYIDPCMCCNDR 376 >UniRef50_C9RKY1 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKY1_FIBSS Length = 379 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 141/401 (35%), Positives = 217/401 (54%), Gaps = 29/401 (7%) Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 N + F+N+GP HPS HGA R+ L++DGE IV+ VP GY HRG EK E Sbjct: 6 PPGFRLERKSNTEEFFINMGPQHPSTHGALRLTLRMDGETIVEVVPHFGYIHRGMEKQAE 65 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 S+ YI +DR +YL N + V+A+EK + VP R IRVML EL RI SHL+ Sbjct: 66 SMSYLQYIAMSDRQDYLTAIQNNLGVVIALEKGMNVGVPLRGEYIRVMLQELGRIASHLV 125 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 + F D+G T + F F +R+ I+D++E +TG R+ +FR GG +D+P + ++ Sbjct: 126 FYGCFGGDLGGQTCLLFGFKEREMIHDILEEVTGSRLTTNFFRPGGSRYDVPDTFIPRVK 185 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 FLD M + YE+ +N I+ RS G+ ++A+ +G +G LRA+G++FDVR+A Sbjct: 186 AFLDHMEDTMKDYERFLSKNIIVLERSIGIGVLSKEDAIAYGCSGPVLRASGVNFDVRRA 245 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLT 496 PYS Y+ DF++PV DCY R +++ E+ +S++IL QC+ P EGP+++ Sbjct: 246 NPYSIYDQLDFDVPVFHN-GDCYDRYKIRIAEIHESMKILRQCVEKFPTEGPWRSKEKPV 304 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST-MSYRT 555 +P + IE KG+ + Y+ + + YR Sbjct: 305 --------------------------RLPVGRYYSEIETAKGLYATYVVAATTGEKPYRI 338 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R PSF H+ I +G +SDL+ + ++D V+ ++DR Sbjct: 339 HTRGPSFPHIAAINKMAQGHKISDLVTIMATLDPVIPEIDR 379 >UniRef50_C5CEV3 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV3_KOSOT Length = 402 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 106/391 (27%), Positives = 187/391 (47%), Gaps = 31/391 (7%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 L +GP HP A ++LDGE +VD + G+ HRG EK+ E ++ I Sbjct: 1 MSKEFNLPVGPFHPLLEEAEYFKIKLDGERVVDIEMETGWMHRGIEKISEESTFDQSIFV 60 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +RI + + + A E + I VP + IR ++ EL R++SHLL++ +G Sbjct: 61 VERICGICSASHPFACINAFEDIGEIEVPLKARYIRSLIGELERVHSHLLWLGLAGHFIG 120 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T +A+ R+ + +++E ITG R H F+IGGV D + ++ E LD++ K+L Sbjct: 121 YDTLWMWAWKYREPVLEVIEMITGNRNHYGTFKIGGVRRDYDVSLNSVVHEKLDFLEKKL 180 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 KA + +++ R GV +EA+ + G RA+G+ DVRK PY+ Y+ D Sbjct: 181 TMVAKAVANDPVVRSRLCGVGVLTKEEAISYCAVGPTARASGVAIDVRKDEPYAAYDLLD 240 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP--EGPFKADHPLTTPPPKERTL 505 F + V D + + ++++ E+ +S++++ Q + + +GP D Sbjct: 241 FGVVV-REEGDIFAKTVVRILEVFESIKMIRQIIEKLRKVKGPIYNDVK----------- 288 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 +PA E EA +G +Y+ +DGS R ++R PS+ ++ Sbjct: 289 -----------------EIPAGEGIGRHEAPRGEVFHYIRTDGSNRPVRHKIRAPSYVNI 331 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 A+ G ++D+++ L S+D +R Sbjct: 332 PTYKASCIGENLADVLITLASVDPCYCCTER 362 >UniRef50_C6A407 Membrane-bound hydrogenase MBH 1, subunit Mbh1L (NiFe hydrogenase catalytic subunit) n=4 Tax=Thermococcus RepID=C6A407_THESM Length = 430 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 102/399 (25%), Positives = 182/399 (45%), Gaps = 27/399 (6%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + E ++ + +GP HP+ + ++ LDGE I+ +GY+ RG E + R+++ Sbjct: 2 NSRIEYWVKIPIGPIHPALEEPEKFIITLDGERIIHVDIKLGYNLRGLEWIAMRRNYIQL 61 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 + +RI + + Y AVE++AGI VP+R IR ++ EL RI+SHLL + Sbjct: 62 LYLVERICGICSFSHNHTYTRAVEEMAGIEVPERAEYIRAIIGELERIHSHLLNLGVVGH 121 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 +G T + ++ R+++ D++EAI G R++ A IGGV D+ R++ + + Sbjct: 122 AIGYDTVLHLSWLARERVMDILEAIGGNRVNYAMNTIGGVRRDIEEKHKRMILDMIKHYR 181 Query: 385 KR-LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 + + E+ L + ++ R + + ALE+ G R +GI DVR Y Sbjct: 182 EEVMPKVEEIFLYDPTVEARLRDAGVIPKRIALEYSAQGPTARGSGIKKDVRYNERLGVY 241 Query: 444 ENFDFEIPVGGG-----VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 + D + R++++V EL QS+ I+E+ + MPEG K Sbjct: 242 PELGIKPITPKEFTGVIKGDVFDRMVVRVGELWQSMEIIEKAFDQMPEGKIKTFSKDNVT 301 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD-GSTMSYRTRV 557 K EA +G +Y+ ++ G+ + + Sbjct: 302 LTK--------------------LKKAEGAGIGRYEAPRGETIHYVRANPGTDTPAKWKA 341 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R P+F +L + A+ G ++D+ V + SID +S DR Sbjct: 342 REPTFPNLFAVARALVGEQLADVPVAIASIDPCLSCTDR 380 >UniRef50_A6LMC4 NADH-quinone oxidoreductase subunit D n=14 Tax=cellular organisms RepID=NUOD_THEM4 Length = 367 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 133/389 (34%), Positives = 202/389 (51%), Gaps = 23/389 (5%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 + L GPNHP HG F + + ++G+ +V P G+ HRG EK+ ER+ W+ + Sbjct: 1 MGEVKLFFGPNHPGMHGNFSVHMYVEGDTVVKARPLPGFLHRGFEKLMERRLWYQNLALI 60 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 RI +NE+ Y LAVEK+A I VP+R IR+++ EL RI +HL S +G Sbjct: 61 PRICVPEPDINELCYALAVEKIAKIDVPERAQWIRMIVLELARIANHLWSFSGIGGPIGL 120 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T F+ DR +I D+ E +TG R++ + GGV DL ++++ E LD++ RL Sbjct: 121 YTGSFWGTADRDRILDIFENLTGARVYHMYIVPGGVRKDLTPKIEKMILETLDYIESRLP 180 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 YEK L+N I+ R +G+A + ALE G TG GLRATG+ +D+RK PY Y+ DF Sbjct: 181 DYEKLILKNRIVHTRLKGIAKLDRETALEMGVTGVGLRATGVPYDIRKVDPYLFYDKVDF 240 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 E+P D + RV LK E+ QS++I++Q L MP G Sbjct: 241 EVPFSTD-GDAFARVYLKFREIFQSIKIVKQALEKMPVGKVNTPIS-------------- 285 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH-LQQ 567 + +P +++ IE+T+G YY+ SDG YR VR S+ Sbjct: 286 -------EGSALRFRVPKGQAYVHIESTRGEYGYYMVSDGGEKPYRVVVRGASYPQTFIG 338 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G+ + D+ ++L ++D +VDR Sbjct: 339 VEKYLPGTRIEDVPIWLSTMDVCAPEVDR 367 >UniRef50_P15689 NADH-ubiquinone oxidoreductase 49 kDa subunit n=10 Tax=cellular organisms RepID=NDUS2_PARTE Length = 400 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 131/396 (33%), Positives = 206/396 (52%), Gaps = 14/396 (3%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +N GP HP+AHG R++LQL+GE + IG HRG+EK+ E + + +PY DR++Y Sbjct: 6 VNFGPQHPAAHGVLRLILQLNGEVVEKMDIHIGLLHRGSEKLMETKPYLQSMPYFDRLDY 65 Query: 274 LGGCVNEMPYVLAVEKLAGIT-VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 + V E Y LA+E L T ++R M EL RI +H+L I+ D+G+M+ + Sbjct: 66 VSMMVQEHAYCLAIEALLNTTNYTANFVLVRTMFDELTRILNHMLAIACHALDIGSMSSI 125 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHD-LPRGWDRLLREFLDWMPKRLASYE 391 F+AF +R+KI + E + G RMH A++R V + L + EF + L+ Sbjct: 126 FWAFEEREKIMEFYERVCGRRMHAAFYRPNEVNLNFLSVKLLTDILEFNNNCLTTLSEMH 185 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA--RPYSGYENFDFE 449 N I K R + + K+ L++G TG R+TGI D+R Y+ Y +F Sbjct: 186 NILTYNKIWKQRLVNIGSISYKDCLDFGLTGVMARSTGIKRDLRMDAFDTYANYYYLNFR 245 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM--------PEGPFKADHPLTTPPP- 500 G D Y R ++++ E+ +S+ I+ Q + + P KA + Sbjct: 246 -SYTGQAGDSYDRFLIRMNEMSESINIISQAIFKLTTSKNTCSPASILKALNKKKFISQT 304 Query: 501 KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP 560 + +E LITHF S G + +N ++Q +E+ KG L SDGS YR +VR+P Sbjct: 305 YKNEYSSMEKLITHFKYWSEGFKIQSNWTYQAVESPKGEFGVTLVSDGSNKPYRCKVRSP 364 Query: 561 SFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++ HLQ +P +G L++DL +G+ID V ++DR Sbjct: 365 AYHHLQVLPKMSKGHLLADLSALIGTIDIVFGEIDR 400 >UniRef50_Q0F384 Hydrogenase subunit n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F384_9PROT Length = 532 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 115/502 (22%), Positives = 186/502 (37%), Gaps = 48/502 (9%) Query: 96 YHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIM 155 Y + +R +L+ LA + +P+ + + A ER D+FGI P+ R + Sbjct: 76 YMAFAHPEHRHTLLRTPLAAENPELPSISGHYIAACRMERHMQDMFGIHITDIPDPRPWI 135 Query: 156 MPQTW--KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMF 213 + W + +PLR D+ AR L + + +E Sbjct: 136 KHEHWPREAYPLRVDFDARPP------------------LLAEAHGDYDYVRSGSEGVYE 177 Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + +GP H GE I++ +GY H+G E+ + +S + RI Sbjct: 178 IPVGPVHAGIIEPGHFRFLAVGEHILNMEERLGYVHKGIERAMQSKSAEEGLKVASRISG 237 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + + A E I VP R + IR +L E RI +H+ I D + Sbjct: 238 DSTVAHAWAFAQACEYAGQIDVPRRASFIRAILCERERIANHIGDIGAVCNDAAFAFMLH 297 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 R+ + L + G R+ GGV DL LLRE + + Sbjct: 298 QMHRLREDMARLHLELFGHRLLMNTLIPGGVLVDLGERAIGLLREQTLAIANEVEHLRAI 357 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 + ++GR G ++A + G G RA+G D R Y+ Y+ + +P Sbjct: 358 YADHPSIQGRVIGSGMVPVEDAQDIGLLGYVGRASGHYPDERIEEAYAPYDELEVNVP-Q 416 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 G + D TRV ++ EE+ +S R++ + L MPEGP A+ Sbjct: 417 GKLGDVATRVWVRFEEIAESSRLISELLEKMPEGPIVAN--------------------- 455 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 W P P F IE +G + ++ R VR PS + + A+R Sbjct: 456 ------WLPPEPGVSGFAAIEGWRGEIAAWVRFGEGGQIDRCFVRDPSVINWLGLELAVR 509 Query: 574 GSLVSDLIVYLGSIDFVMSDVD 595 V D + S + S D Sbjct: 510 EVPVPDFPLNNKSFNCSYSGND 531 >UniRef50_B3ES55 NADH-quinone oxidoreductase subunit D n=19 Tax=Bacteroidetes/Chlorobi group RepID=NUOD_AMOA5 Length = 403 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 124/394 (31%), Positives = 202/394 (51%), Gaps = 25/394 (6%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 + + +N+GP HP+ HG R+ + LDGE +VD VP +GY HR EK ++ IP+ D Sbjct: 28 EEVLINIGPQHPATHGILRLEVILDGEIVVDVVPHLGYLHRCFEKHAATLPYNQTIPFVD 87 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 R++YL +E + + VE + G+T +P RV IRV+++EL R+ SH + I T+ D+G Sbjct: 88 RLDYLAAMNSEHAFAMGVEHMLGLTGKLPRRVEYIRVLMAELNRLASHFMAIGTYGIDLG 147 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 A T + DR+ I L E +G RM + IGG+ +DLP G++ EF+ ++ +L Sbjct: 148 AFTSFLWLMRDREYILRLFEWASGARMLYNYIWIGGLYYDLPVGFEERCLEFITYLKPKL 207 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 + + NT+ R+ V A+ G +G LRA+G+ D+R+ YS Y Sbjct: 208 EEINQLLIDNTLFIKRTANVGVLPLATAINHGVSGPILRASGLRLDLRRIDGYSIYPELS 267 Query: 448 FEIPVGGG----VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKER 503 F+IP+G G V DC+ R +K +E ++S++I EQCL + + Sbjct: 268 FDIPIGEGLMGHVGDCWDRTWVKFQECKESIKITEQCLVRLTSDLKRTADFNPQ------ 321 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT-SDGSTMSYRTRVRTPSF 562 V A + + E +G ++ SD R + R+ SF Sbjct: 322 ------------KMVPKKVRTKAQDCYIRAENPRGELGFFFRASDNGDKPIRCKARSSSF 369 Query: 563 AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++L I + +G +++DLI +GSID V+ ++DR Sbjct: 370 SNLSVISSIAKGQVLADLIAIIGSIDIVLGEIDR 403 >UniRef50_C0QBF7 HyfG n=3 Tax=Bacteria RepID=C0QBF7_DESAH Length = 503 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 109/559 (19%), Positives = 181/559 (32%), Gaps = 84/559 (15%) Query: 62 KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIM------------- 108 PK + L D +D + ADF L + N I Sbjct: 3 NSPKKSLTLSDWTAIDYNDC---PVVSMADFRTT-ILDDVRNNYRICSFFGTPNPEEKIR 58 Query: 109 ------------LKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 ++V A+ D + T P +ERE ++ + + GHP L+ + Sbjct: 59 LICVLANDDAGSVEVVAADTDPAFQSLTPDCPQVQAFEREIYEQWNVLPQGHPWLKSV-- 116 Query: 157 PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNL 216 + HP + + E+ + + Sbjct: 117 ----RSHP----------------------PVVAAHGKAAHAGTTDFFSIDGEEAHEVAV 150 Query: 217 GPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGG 276 GP H Q GE + +GY HRG E + + Y + + Sbjct: 151 GPVHAGIIEPGHFRFQCHGETVYHLEISLGYQHRGVEPALKDGPDKRTLHYFETLAGDTS 210 Query: 277 CVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAF 336 + +E LAGI VP R IR + +EL RI +H+ + DVG + + + Sbjct: 211 IGHGTAGCCMIEALAGIDVPPRGQAIRAIAAELERIANHIGDLGAISGDVGFLPTMSYCG 270 Query: 337 TDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQ 396 R +L I G R GG A D+ L LD + S + L Sbjct: 271 RIRGDALNLTAMICGNRFGRGLVIPGGTAWDITHAQTGELLRRLDEIHADAHSAIELMLN 330 Query: 397 NTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGV 456 + R + + A E G G RA+G+ DVR + PY Y + + Sbjct: 331 TPSVLARLENTGQVPTQTAREIGLVGLAARASGLKQDVRTSHPYENYRLTPLPV-ITRKT 389 Query: 457 SDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFL 516 DC R ++ E++ S + + L ++P G PP K T+ Sbjct: 390 GDCLARAQIRWGEIQASFKFIRTLLADLPGGEVANLWEGKLPPQKMATI----------- 438 Query: 517 QVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSL 576 ++E +G + +D + ++ PSF + + A+R Sbjct: 439 ---------------LVEGWRGEICHTAATDSAGKFSFYKIVDPSFHNWFGVSLALRNQQ 483 Query: 577 VSDLIVYLGSIDFVMSDVD 595 +SD + S + D Sbjct: 484 ISDFPLCNKSFNLSYCGHD 502 >UniRef50_A3ZL03 NADH dehydrogenase (Ubiquinone) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL03_9PLAN Length = 418 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 131/440 (29%), Positives = 211/440 (47%), Gaps = 44/440 (10%) Query: 178 PFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEE 237 EA+ G+ D M +N+GP HPS HG R+VL+ DGE Sbjct: 2 TVSFKHPCWHQRNEAVMEMAPTSGIVEIDVRTDEMLVNMGPQHPSTHGVLRLVLRTDGEV 61 Query: 238 IVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPD 297 + + P IGY HR AEK+GE + +IPYTDR++YL G + + LAVEKL +P+ Sbjct: 62 VSEATPHIGYLHRCAEKIGENLTPRQWIPYTDRMDYLAGMNMNLGWALAVEKLIDYDLPE 121 Query: 298 RVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPA 357 + +RV+++EL RI SHL+ + T+ D+G+ +P +AF +R++I DL+E G R+ + Sbjct: 122 KARHLRVIIAELNRIASHLVGMGTYGLDLGSFSPFLYAFRERERILDLLEDACGARLTYS 181 Query: 358 WFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALE 417 + GG DLP GW + L FLD + Y N I R+ + A+ A++ Sbjct: 182 YLTPGGATADLPPGWLQKLTGFLDQFEPVILDYHALLTNNAIFIKRTANIGVMSAEMAID 241 Query: 418 WGTTGAGLRATGIDFDVRKA--RPY-SGYENFDFEIPVGGGV-----------------S 457 +G +G LR +G+D+D+R+ Y S Y + FE+ V Sbjct: 242 YGCSGPVLRGSGVDYDLRRDGEERYTSLYAGYAFEVIVEKNGSYPRDHEYPPVPSDAVLG 301 Query: 458 DCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQ 517 DC+ R +++ E+ Q++ +L Q + + + Sbjct: 302 DCWHRFYVRMLEVIQAIDLLRQGIEK-----------------------YSQATGDWGTP 338 Query: 518 VSWGPVMPANESFQMIEATKGINSYYLTSDGST-MSYRTRVRTPSFAHLQQIPAAIRGSL 576 + +P E++ E +G +Y+ SDGS + R R R+ F +L P R L Sbjct: 339 IKLATKLPKGEAYLETECPRGQMGFYIVSDGSGSIPLRARARSSCFCNLSVAPELCRDCL 398 Query: 577 VSDLIVYLGSIDFVMSDVDR 596 ++D+ +GS+D VM ++DR Sbjct: 399 IADVPAIIGSLDIVMGEIDR 418 >UniRef50_A5GBN1 Ech hydrogenase subunit E n=20 Tax=cellular organisms RepID=A5GBN1_GEOUR Length = 359 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 93/389 (23%), Positives = 173/389 (44%), Gaps = 30/389 (7%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + +GP HP L + E+++D +P I Y HRG E++ E++ + + Sbjct: 1 MAQRNIIPIGPQHPILPEPIHFDLVTEDEKVIDAIPSISYVHRGLERLVEKRDFIDFAHV 60 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 DRI L ++ + Y AVE++ I VP R +R + +EL RI+SH+ ++ G Sbjct: 61 ADRICGLCSFMHSLGYCQAVEEIMSIEVPQRALYLRSIWAELSRIHSHIFWLGAAADAFG 120 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 + A R+ + D+ E TG R+ ++GGV D+ + + L + L Sbjct: 121 FESLFMQAMRLREPVLDIFEETTGGRVILGVCKVGGVRRDIDGDSLKGIVNRLTTLKGAL 180 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 L + ++ R GV ++A G G RA+G+ D+R A Y+ Y+ + Sbjct: 181 EELSNVFLNDYSVQHRLAGVGFLSREDAYTLGCVGPMARASGLAIDMR-ALGYAAYKYLE 239 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 E PV DC+ R +++ E+ ++ ++ Q + +P GP T Sbjct: 240 VE-PVVESAGDCHARCRVRIREIFHAIDLIRQAVGKIPAGPVDVKVTGT----------- 287 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 P E + +E +G +Y+ +G+ R RVR P+F+++ Sbjct: 288 -----------------PDGEYYSRVEQPRGEVIHYVKGNGARFLQRFRVRVPTFSNIPA 330 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + ++GS ++D+ + ++D +S +R Sbjct: 331 MVKVLKGSQLADVPNIILTLDPCISCTER 359 >UniRef50_A4WMP9 NADH dehydrogenase (Ubiquinone) n=5 Tax=Thermoproteaceae RepID=A4WMP9_PYRAR Length = 407 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 7/390 (1%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + + GP HPS+ G R ++++DG+ +V+ PD GY HR EK+GE + W IP Sbjct: 24 KRRILDIFWGPQHPSS-GHTRFIVEVDGDIVVNVTPDPGYVHRTMEKLGETRHWIQNIPL 82 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R+ Y +AVE++A + V R +RV+++EL RI++HL + +G Sbjct: 83 FERLSLPDAINVTWAYAMAVERVAKLDVSPRAQYLRVIMAELSRISTHLYDLGLHAIMIG 142 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 + T + F R+ + L ++G R P W GGV P + + FLD++ K++ Sbjct: 143 SSTGFMWGFGLRELLVQLWAMVSGSRTTPTWVLPGGVRTAPPDAFYEQTKGFLDYLEKKI 202 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 + + ++N + R + V ++A TG G R +GID+D R+ Y Y+ F+ Sbjct: 203 DEFVRLVVKNPVGYYRLKDVGYLSKEDAARLMATGPGARGSGIDWDARRVYKYGIYDEFE 262 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQ 506 +++ V D R M+++ E++QS +I+ Q L+ +P +GP + L PPK+R Sbjct: 263 WDVCV-EDAGDSLARTMVRICEIQQSAKIIRQALDRVPKDGPLVGEAVLHRIPPKQREKA 321 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 + L + ++P E + E +G +++ DG+ YR R+ TPS+ +L+ Sbjct: 322 NEIIR----LGALYTTMLPQGEGVGVTEGGRGRYFFHVFGDGTEKPYRVRISTPSWQNLR 377 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + A G+ + DL GS + + DR Sbjct: 378 AMIRAFIGARLMDLPAIYGSFGYFPPEQDR 407 >UniRef50_B1VSH7 NADH-quinone oxidoreductase subunit D 2 n=6 Tax=Actinomycetales RepID=NUOD2_STRGG Length = 394 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 129/389 (33%), Positives = 206/389 (52%), Gaps = 29/389 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M LN+GP HPS HG R+ + LDGE + P IGY HRGAEK+ E + + I +R Sbjct: 31 MVLNIGPQHPSTHGVLRLRIVLDGERVQHAEPVIGYMHRGAEKLFEARDYRQIIMLANRH 90 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 ++L NE+ V+AVE++ G+ VP+R R +L+EL R+ +HL+++ ++ ++G +TP Sbjct: 91 DWLSAFSNELGVVMAVERMLGMEVPERAVWTRTLLAELNRVLNHLMFLGSYPLELGGITP 150 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 VF AF +R+++ ++E ++G RMH + R+GG+ D+P GW +R+ + + R+ YE Sbjct: 151 VFHAFREREELQAVMEEVSGGRMHYMFNRVGGLKEDVPAGWAGRVRDAVASVRSRMDVYE 210 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF-DFEI 450 L N I +GR++ V A +G +G RA+G+DFD+R+ PY Y D Sbjct: 211 NLVLGNEIFRGRTRDVGVLSAAAVHAYGVSGPIARASGVDFDLRRDEPYLAYGELRDTLK 270 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM---PEGPFKADHPLTTPPPKERTLQH 507 V DC R +E+ SL + + CL+ M GP P Sbjct: 271 VVTRTEGDCLARFECLLEQTLNSLDLADACLDRMAHLAPGPINQRLPKVLKA-------- 322 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 P ++ E G+N YYL S G YR ++R+ SF ++Q Sbjct: 323 -----------------PEGHTYAWTENPLGVNGYYLVSKGEKTPYRLKLRSASFNNIQA 365 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G+LV+D++ LGS+ FV+ D+D+ Sbjct: 366 LTELLPGTLVADMVAILGSLFFVVGDIDK 394 >UniRef50_P31895 Carbon monoxide-induced hydrogenase n=14 Tax=Bacteria RepID=COOH_RHORU Length = 361 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 29/389 (7%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 + +GP H + +++DGE++V G+ HRG E + +++ + I T Sbjct: 1 MSTYTIPVGPLHVALEEPMYFRIEVDGEKVVSVDITAGHVHRGIEYLATKRNIYQNIVLT 60 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +R+ L + Y +A+E + G+ VP R +RV+ E R+ SH+ ++ VG Sbjct: 61 ERVCSLCSNSHPQTYCMALESITGMVVPPRAQYLRVIADETKRVASHMFNVAILAHIVGF 120 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL- 387 + R+ + D EA+ G RM A IGGV +DL + LD + L Sbjct: 121 DSLFMHVMEAREIMQDTKEAVFGNRMDIAAMAIGGVKYDLDKDGRDYFIGQLDKLEPTLR 180 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 N + R++G+ A + +++G G R +G +DVRK PY+ Y+ D Sbjct: 181 DEIIPLYQTNPSIVDRTRGIGVLSAADCVDYGLMGPVARGSGHAYDVRKQAPYAVYDRLD 240 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 FE+ +G D ++R M++ +E S+ ++ QCL +MP+GP KA Sbjct: 241 FEMALGEH-GDVWSRAMVRWQEALTSIGLIRQCLRDMPDGPTKA---------------- 283 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 P +PA E+ EA +G YYL ++G+ R + R P++ + Sbjct: 284 -----------GPVPPIPAGEAVAKTEAPRGELIYYLKTNGTDRPERLKWRVPTYMNWDA 332 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G+ +SD+ + + SID +S +R Sbjct: 333 LNVMMAGARISDIPLIVNSIDPCISCTER 361 >UniRef50_B3DZF5 Formate hydrogenlyase subunit 5 n=8 Tax=Bacteria RepID=B3DZF5_METI4 Length = 535 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 106/480 (22%), Positives = 177/480 (36%), Gaps = 54/480 (11%) Query: 117 DLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW-KGHPLRKDYPARATE 175 + P+ +P+A ER +DLFG+ G + R + W P+ YP + Sbjct: 108 EGKFPSVAVAYPSAARLERALYDLFGLQAQGSLDSRPWLDHGKWGVRFPMGDSYPDGEEK 167 Query: 176 FSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDG 235 F E + +GP H + G Sbjct: 168 LYSF------------------------FPARGESLHQVPVGPVHAGIIEPGHFRFTMSG 203 Query: 236 EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITV 295 E +V +GY H+G E + S + RI Y LAVE+ GI+ Sbjct: 204 EIVVRMEERLGYTHKGIESLFSGASIDKGMEIAGRISGDSTVAYAYGYALAVEEALGISP 263 Query: 296 PDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMH 355 P R IR +++EL R+ +H + D + R+KI ++ G R+ Sbjct: 264 PPRAEWIRALMAELERMANHFGDVGAICNDAAFPRILSRCALLREKILRCAQSCFGHRLM 323 Query: 356 PAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEA 415 +GGV DL +RE L+ + + + + L+ R+ G + A Sbjct: 324 RDKIVVGGVKEDLNAEGLSRIRELLETIKEEVVCLKDFYDSKNSLQDRTVGTGVLDRRLA 383 Query: 416 LEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLR 475 +G G RA+G +FD RKA Y Y++ FE+PV D RV +++ E+ QS++ Sbjct: 384 ELFGAGGFIGRASGRNFDSRKAFAYKPYDSLSFEVPVLED-GDVNARVWIRILEIEQSVK 442 Query: 476 ILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEA 535 +LEQ L MP G A+ + + ++E+ Sbjct: 443 LLEQILEGMPPGSICAERIGGE---------------------------GSGKGLSVVES 475 Query: 536 TKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +G ++ + R R PS+ + I G +++D + S + S D Sbjct: 476 FRGDILTWIEIY-NGKIIRCHPRDPSWFQWPLLEKVIVGGVIADFPLCNKSFNCSYSGHD 534 >UniRef50_B3T914 Putative Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=2 Tax=environmental samples RepID=B3T914_9ARCH Length = 384 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 117/397 (29%), Positives = 200/397 (50%), Gaps = 26/397 (6%) Query: 200 WGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ 259 G++ ++ M LN+GP HP + G RI+L++DG+ IV C PD GY HRG EKM E + Sbjct: 14 PGLQLEKVDDRIMTLNVGPQHPGS-GHMRIILKVDGDYIVHCDPDPGYVHRGEEKMAEYR 72 Query: 260 SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYI 319 ++ + IP+ +R C PY L VE+L G+ VP+R IRV+ +EL R ++ Sbjct: 73 NYITNIPHLERPVIHDSCNILYPYCLGVEELLGLEVPERAKYIRVIAAELNRCVYTQYWL 132 Query: 320 STFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREF 379 + + +G T + DR+ + DL++ +TG R+ ++F GGV +D+P ++ + Sbjct: 133 AIYGIFLGHSTMFMWPMGDRELVIDLLDKMTGARVTHSYFVPGGVRNDIPPNFEDVCLRQ 192 Query: 380 LDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARP 439 +++ KRL Y N IL R++ ++A++ GTTG+ LRA+G+DFD+RK P Sbjct: 193 VNYFEKRLKEYADMFYDNPILISRTKDTGILSREDAIKLGTTGSVLRASGVDFDIRKKEP 252 Query: 440 YSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 Y YE DF+ V D Y R + ++ +S RI+ L MP+ Sbjct: 253 YDVYEELDFQTNVLKE-GDSYARSKIPWLDMFESCRIIRDALKKMPKSGSVR-------- 303 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 +++ P E ++ +E+ +G ++ S G YR ++ Sbjct: 304 ----------------VKLKPNPKGGDTEVYRRVESGRGSLGMHIISRGKPQPYRLKISV 347 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SF +L +P + G ++ ++ S+++ + DR Sbjct: 348 GSFRNLIAMPHLLTGEMLGNMPAVYWSLNYWPVEADR 384 >UniRef50_Q3ZW31 Hydrogenase, group 4, HycE subunit n=3 Tax=Dehalococcoides RepID=Q3ZW31_DEHSC Length = 526 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 101/487 (20%), Positives = 181/487 (37%), Gaps = 48/487 (9%) Query: 111 VALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKD 168 V + D V + +FP+A ++ERE D +G F+ + RR+ + +T+ HPL Sbjct: 85 VIIRRADSPVSSIAAIFPSACYFEREIRDGYGCEFENAFDRRRLFLHETYPANFHPLANS 144 Query: 169 YPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFR 228 + + +A + E + +GP H Sbjct: 145 FKNQPLSLPAGVENEALYPF---------------KKISGEGVYEVGVGPVHAGIIEPGH 189 Query: 229 IVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVE 288 GE I++ + Y HRG EK+ + + + I N Y AVE Sbjct: 190 FRFSAIGEPILNLEVRLFYTHRGLEKLAMGKDIDFGLKIAEGISGDESAANTYAYSSAVE 249 Query: 289 KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEA 348 + P R +R++L E+ R+ SHL +S + DVG R+++ + Sbjct: 250 HICSSRPPRRAEQLRLILLEMERLYSHLADLSGMLTDVGYPVGAASLSALREELMRWNKR 309 Query: 349 ITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVA 408 +TG R GG+ D+P L ++L R + + AL T + R + Sbjct: 310 LTGSRFLKGIIAPGGLLKDIPGELITELADYLYAFEGRFSEQVEKALAKTSVVDRFETTG 369 Query: 409 AYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVE 468 + + TG RA+G D R +PY Y F++PV D R +++ Sbjct: 370 IVNNRLLIPLNITGVTARASGEAIDTRLNQPYGFYPELSFKLPVL-PEGDVMARFRVRLS 428 Query: 469 ELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 528 E++ SL ++ + + G + Sbjct: 429 EVQTSLGLILKTAAKLSAGEYAIPL-----------------------------KPVNGY 459 Query: 529 SFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSID 588 S ++E+ +G + ++L R +VRT S+ + Q I A+ G ++ D + S++ Sbjct: 460 SLVLVESPRGQSLHWLWLR-DGKIERYKVRTASYCNWQAIEHAVLGDIIPDFPLINKSLN 518 Query: 589 FVMSDVD 595 + D Sbjct: 519 LSYAGTD 525 >UniRef50_A7C1S4 NADH-ubiquinone oxidoreductase subunit n=3 Tax=cellular organisms RepID=A7C1S4_9GAMM Length = 380 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 125/388 (32%), Positives = 186/388 (47%), Gaps = 27/388 (6%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L GPNHP G + + ++L G+E+V D GY HRG EK+ E + W + RI Sbjct: 17 YELYFGPNHPGIEGNYALKVRLSGDEVVGVKADAGYLHRGFEKIMEERLWIQNVALVPRI 76 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 E Y AVE L G+ VP+R IRVM+ E+ RI +HL G + Sbjct: 77 CVPDPPPMEETYARAVEMLGGLEVPERAQWIRVMMLEMSRIAAHLFIAGGTSATTGQYSN 136 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +F+ DR I DL E +TG R++ + GGV D+P G+ L + LD++ RL Y+ Sbjct: 137 MFWGIADRDLILDLFEELTGARIYNMFITPGGVRRDIPDGFLDRLGQVLDFLEARLPEYD 196 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 N + R++G+ ++AL WG TG LRA G+ FDVR+ PY YE DF+IP Sbjct: 197 DLFFDNPVFHRRAEGIGKMTQEQALAWGVTGPNLRACGLPFDVRRNDPYLVYEQLDFDIP 256 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP--EGPFKADHPLTTPPPKERTLQHIE 509 G D R+ ++ E+ +S +IL Q + +P +GP + P Sbjct: 257 TETG-GDVLDRIRVRRSEIIESTKILRQVIQRLPHVKGPIRCHLPN-------------- 301 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH-LQQI 568 +P +++ EA KG +Y S G T +R VR PS H +Q + Sbjct: 302 ---------PLAWNVPEGDAYARTEAQKGELGFYAVSTGGTKPWRVHVRGPSCMHAVQVL 352 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G+ + D+ + + S+D +VDR Sbjct: 353 EKLCLGARIEDIAMIMFSLDACPPEVDR 380 >UniRef50_B2HHH7 Formate hydrogenase HycE n=3 Tax=Actinomycetales RepID=B2HHH7_MYCMM Length = 498 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 113/539 (20%), Positives = 199/539 (36%), Gaps = 59/539 (10%) Query: 63 LPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPT 122 + + +L RL V Y L++ +R + L + + VP+ Sbjct: 12 DAELAESVAELLAEGYRLALVAAHDDGDALRVVYLLVAGQPDRRVELTLRTGAANPSVPS 71 Query: 123 FTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFE 180 +L A +ERE DL+GI+ GHP RR++ W HP+R+D Sbjct: 72 LAELSIPAGRFEREMMDLYGISPVGHPQPRRLVRHAHWPQDWHPMRRDA----------- 120 Query: 181 LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVD 240 + F E + +GP H + GE I+ Sbjct: 121 ---------GDPPPFDAVGRFPFVTVEGPGVYEIPVGPVHAGLIEPGHFRFSVIGESILR 171 Query: 241 CVPDIGYHHRGAEKMGERQSW---HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPD 297 + + HRG EK+ E ++ + +RI + + + LAVE G+ VP+ Sbjct: 172 LKARLWFVHRGVEKLFEGRNALGAREAVELAERISGDSSAAHSLAHCLAVEDALGLDVPE 231 Query: 298 RVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPA 357 V+ +R +L EL R+ +H+ + DVG A R+++ + +TG R+ A Sbjct: 232 PVHRLRALLVELERLYNHVTDLGALANDVGFALANAHAQGIRERVLRINRRVTGHRLLRA 291 Query: 358 WFRIGGVA-HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEAL 416 GGV +LP + L + +A + L+N+++ R A +++A Sbjct: 292 AMAPGGVVLQELPDPAE------LHAVAAEVAEISELTLRNSVVYDRFAETAVLHSEDAR 345 Query: 417 EWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRI 476 G G RA+GI D R P + V G D R ++ +E S+ + Sbjct: 346 ALGCLGYVARASGIATDARLDHPTA---ELPVT-AVAAGGGDVLARYTIRRDEFAASVAL 401 Query: 477 LEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEAT 536 + N PPP + T ++E Sbjct: 402 ACHLVEN------HHGRTRFAPPPAANGARSAVTS-----------------GVGIVEGW 438 Query: 537 KGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +G + + DG+ R ++ PS+ + +P A+ ++V D + S + + D Sbjct: 439 RGAVLHRVEVDGAGRITRCKIVDPSWFNWPALPVAMADTIVPDFPLANKSFNLSYAGND 497 >UniRef50_Q0W3I1 Ech hydrogenase, subunit E n=2 Tax=Euryarchaeota RepID=Q0W3I1_UNCMA Length = 359 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 99/388 (25%), Positives = 167/388 (43%), Gaps = 34/388 (8%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + GP HP R+ L LDGE + D + GY HRG EK E ++ +R+ Sbjct: 3 STVQFGPQHPVWIEPIRLKLALDGELVKDVELEAGYVHRGLEKKFE-WDYNKAAYLAERV 61 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + + LAVE + +P R VIR ++ EL R++SHLL I ++ +G Sbjct: 62 CGICTQHHSTCFCLAVESTMKLEIPRRAAVIRNIMLELERLHSHLLAIGLTLEAIGFENL 121 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 F +R+ + D+ E TG R+ +GGV ++ + + +F D + KR E Sbjct: 122 FMLCFRNREIVLDVFERTTGNRVLHGINLVGGVTRNIGPEMAQEIMDFCDTIEKRCRDLE 181 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + + +K R +GV + AL++ G R +GI +DVR PY Y + Sbjct: 182 DMIVHSRTIKDRMKGVGILSKQTALDYSVVGPIARGSGIPYDVRIDAPYLLYGELKMK-H 240 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQC---LNNMPEGPFKADHPLTTPPPKERTLQHI 508 V D + R +++V EL QS+ ++ Q L +P+ Sbjct: 241 VVEEGCDVWARSIVRVRELFQSIDLIRQLVPMLEGLPDD--------------------- 279 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI 568 ++ MP + F +E +G Y++ S R +VRT ++A+ + Sbjct: 280 --------ILAKSKTMPDGDGFARVEPPRGELFYFVRGKKSKELDRVKVRTSTYANGPAL 331 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 I+G ++D+ S D + DR Sbjct: 332 IPVIKGCQLADVGPITISYDPCIGCFDR 359 >UniRef50_C7N626 Ech hydrogenase subunit E n=25 Tax=cellular organisms RepID=C7N626_SLAHD Length = 362 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 103/385 (26%), Positives = 174/385 (45%), Gaps = 27/385 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + GP HP + L + E++++ +P IG+ HRG EK+ E++ H +I +RI Sbjct: 5 TVIPFGPQHPVLPEPLHLDLVVQDEKVIEVIPQIGFIHRGLEKLVEKKDIHQFIYVAERI 64 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + + Y VEKL G+ VP R +RV+L EL RI+SHLL++ G Sbjct: 65 CGICSFGHSLGYAETVEKLMGVEVPRRAEYLRVILHELSRIHSHLLWLGLAADAFGFEAL 124 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 ++ R+++ D+ EA TG R+ + +IGGV D+ + + LD M A Sbjct: 125 FMHSWRIRERVLDIFEATTGGRVILSAVQIGGVIRDIDDEELKQISATLDGMRSEYAELM 184 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 L +T ++ R V +A + G RA+ + FD R Y + P Sbjct: 185 ATFLNDTSVRSRLVNVGRLTQTQAEDLCMVGPFARASNVKFDCR-MLGNGAYGELENFQP 243 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 + DCY RV ++ +E+ QS+ I+++ + +P LT P Sbjct: 244 ILDDEGDCYARVRVRCKEVIQSIDIIQELIAKIPHDGIGERSKLTPPD------------ 291 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 ++ ++E +G YY +GS R R+RTP+ +L + AA Sbjct: 292 --------------GAQAANVLEQPRGECYYYARGNGSKNLERMRMRTPTSQNLAGLVAA 337 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 G+ ++D+ L +ID +S +R Sbjct: 338 CEGAELADVPNILLTIDPCISCTER 362 >UniRef50_B3E6C1 NADH-ubiquinone oxidoreductase chain 49kDa n=2 Tax=Deltaproteobacteria RepID=B3E6C1_GEOLS Length = 506 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 104/535 (19%), Positives = 188/535 (35%), Gaps = 53/535 (9%) Query: 62 KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVP 121 + + ++ G R+ + G PA Y L++ + + + + N P Sbjct: 23 DQDRFLQTILEMTGRGWRVSS-YCGFPADGAITLYCLLASPADGVLGI-MQTICNGTEFP 80 Query: 122 TFTKLFPNANWYERETWDLFGITFDGHPNLRRI-MMPQTWKGHPLRKDYPARATEFSPFE 180 + P +ERE + GI F GHP + + + +GH D RA + Sbjct: 81 SIAVQCPQLQLFEREIAEQCGIRFVGHPWFKPVRFVHSAVRGH----DAWGRADD----- 131 Query: 181 LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVD 240 Q +++ + + E E+ + +GP H Q GE++ Sbjct: 132 -----QPIQVGVMEY--------YRVEGEEIHEVAVGPVHAGVIEPGHFRFQCHGEQVFH 178 Query: 241 CVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVN 300 +GY HRG E++ + + I + + Y + +E L+ P + Sbjct: 179 LEISLGYQHRGIEQLLLNGPHPQTLRQMEAIAGDTSIGHGLAYCMVLESLSKSHPPATAH 238 Query: 301 VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFR 360 +R + EL R+ +H + DVG + F R ++ I G R + Sbjct: 239 ALRGIALELERLANHTGDLGAIAGDVGYLPTASFCGRIRGDFLNMSAFICGSRFGRGLLK 298 Query: 361 IGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGT 420 GG L + L+ L L S + + R +G A+ A+E G Sbjct: 299 PGGTVFGLDQAQREELQNRLATGRAELTSAIELLWNTPSVMSRLEGTGVVSAESAVEMGL 358 Query: 421 TGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQC 480 G RA G+ DVR P+ Y I D +R ++ EE ++SL + Sbjct: 359 VGPAARACGLKRDVRSDYPFGIYRMAQVPIATAHH-GDVCSRSSVRWEECQKSLDFCVEQ 417 Query: 481 LNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGIN 540 L +P+G A+ P+ + + E +G Sbjct: 418 LRQLPKGAHAAELK---------------------------PLQGDQLTVALTEGWRGEI 450 Query: 541 SYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + +D + + ++ PSF + Q + A+R +SD + S + D Sbjct: 451 CHLAITDSAGRFRQYKITDPSFHNWQGLAMALRNEQISDFPLCNKSFNLSYCGFD 505 >UniRef50_A3DKH4 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 Tax=Desulfurococcaceae RepID=A3DKH4_STAMF Length = 406 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 103/396 (26%), Positives = 181/396 (45%), Gaps = 24/396 (6%) Query: 201 GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 + + E + + +GP HP+ H + DGEEIV+ + GY+HRG EK+GE+ + Sbjct: 2 AITKVIEVPYALEIPVGPQHPALHEPVLLKAYADGEEIVNVEINTGYNHRGIEKLGEKNT 61 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 320 ++ I R+ + V+ YV A+E++ + +R +RV+ E R++SH+L + Sbjct: 62 FYRDIFIVARVCGICNLVHANCYVRALEEILDMHPNERAKYLRVLAMEFERVHSHMLINA 121 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 + +G + DR+ I E ITG R+ + IGGV D+ L + + Sbjct: 122 VMAEIIGFDSLFMNIMLDRENIMKAKEIITGNRVLSDYMMIGGVRRDIDSVKKDKLLKII 181 Query: 381 DWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPY 440 D + RL Y+K +++ + R V + + G RA+G+ DVR + Y Sbjct: 182 DKVLPRLHYYKKLFMEDDTILKRLVDVGVIKRSDVTRYTFVGPPARASGVKIDVRVSEKY 241 Query: 441 SGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPP 500 Y + F + V D + R++++ +E +SL + + L ++P P Sbjct: 242 EVYGDIPFNM-VTRNEGDSWARMIVRWDEAIESLNMAKYILEHLPNDGNPVPDERRLP-- 298 Query: 501 KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP 560 P E+F +EA +G +YY+ SDG YR +++TP Sbjct: 299 ---------------------RRFPPGEAFTRVEAPRGELTYYVMSDGKPKPYRLKIKTP 337 Query: 561 SFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SF ++ G ++DL V L S+D +S ++R Sbjct: 338 SFTNIINSGYLYVGHTIADLPVILVSLDPCISCMER 373 >UniRef50_C1TPP0 Ni,Fe-hydrogenase III large subunit n=2 Tax=Synergistaceae RepID=C1TPP0_9BACT Length = 413 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 101/391 (25%), Positives = 179/391 (45%), Gaps = 26/391 (6%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L +GP H L ++GE I D V G HRG E M ++ I +R+ Sbjct: 7 YKLPIGPVHVGLKEPITAWLDIEGEHIKDAVIRPGAIHRGVEFMARERNPIQVIYLAERV 66 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + + +V AVE A I VP R IR M+ EL RI+SH+L+ +G + Sbjct: 67 CGICSFSHAIAFVKAVEDAAQIEVPIRAQYIRSMVLELERIHSHILWSGVACYTIGFDSA 126 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 R+K+ D++EA++G R++ A +GGV D+ R + + + + AS+ Sbjct: 127 FHLGMMLREKVMDVLEALSGNRVNYAVTTVGGVRWDVTPAVVRTVMDMIHYYRNEFASFY 186 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 +AA+ + ++K R + V ++A+++ G R +G+ DVR + PY Y + E Sbjct: 187 EAAINDPVVKARLRDVGVLTTEQAIKYCALGPTSRGSGVRADVRWSAPYDAYCDIHVEPV 246 Query: 452 VGGG-----VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 V D Y R +++V E+ QSL ILE+ + +PEG T P + L Sbjct: 247 VPQDYTGEVHGDVYDRFLVRVYEVLQSLDILEKIMEGLPEGSI------TFEPKVNKLLT 300 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYR-TRVRTPSFAHL 565 + + IEA +G +++ + + + +VR P++++ Sbjct: 301 VL--------------KKAEGVGYGCIEAPRGDDTHAVGLKAQQENVQWWKVRAPTYSNA 346 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 P + + ++D + + SID +S ++R Sbjct: 347 VSWPLMFKDNELADAPLIINSIDPCISCMER 377 >UniRef50_B3TC54 Putative Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC54_9ZZZZ Length = 363 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 122/391 (31%), Positives = 189/391 (48%), Gaps = 31/391 (7%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 E + LN GP HP G FR+++ +DG+ V P IGY HRG EK+ E + + IP Sbjct: 2 TEGLVTLNWGPQHPVT-GHFRMIMTIDGDLCVGAEPTIGYTHRGIEKLLENRQFLVGIPM 60 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R + Y AVE L P R +R ++SE+ R++SHL ++ + +G Sbjct: 61 IERFNMTDTAPMSLSYTKAVESLMDFEAPPRAQYLRTIISEICRLSSHLYNLALYTVALG 120 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR- 386 TP +A DR+ L E ++G R+ + GGV D+P + + + + R Sbjct: 121 MYTPFMWAIGDREHFLKLGEILSGVRLAYNYPIPGGVYKDMPPDFPHQATKTIKYFRNRL 180 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 L Y+K T +K R + V +EAL+WG TG LRA+G+ D+RK PY Y Sbjct: 181 LKDYKKFIYDTTAVKSRGEDVGIMSKEEALKWGVTGPVLRASGVKKDMRKVEPYGAYNEV 240 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 DF++ + D + R++++ EE+ QSL ILEQC+ ++P G + Sbjct: 241 DFDV-ITKNEGDSHARMLVRYEEMEQSLNILEQCIKDIPAGDYFTKVR------------ 287 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS-TMSYRTRVRTPSFAHL 565 P +PA E+F +EA +G YL + + M YRT+ PSF + Sbjct: 288 ---------------PAVPAGETFTRVEAARGEVGVYLFNKETRNMPYRTKFSNPSFKNG 332 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P GS+++D SID ++DR Sbjct: 333 YVLPKLFVGSVIADCAAIYHSIDVWALEMDR 363 >UniRef50_Q6APF2 Related to hydrogenase, component E-formate hydrogenlyase subunit 5 n=1 Tax=Desulfotalea psychrophila RepID=Q6APF2_DESPS Length = 509 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 109/500 (21%), Positives = 184/500 (36%), Gaps = 50/500 (10%) Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTKLFPNA-NWYERETWDLFGITFDGHPNLRRIM 155 HL+++ RNRD L V E + T + +ERE + +GIT DGHP L+ + Sbjct: 58 HLLAVVRNRD--LYVIGTEVGKSFQSLTGAVSEKFHMFEREIAEQYGITPDGHPWLKMVR 115 Query: 156 MPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLN 215 + + G KD F K+++ F E E + Sbjct: 116 YHKNYAG---AKDV---------FGNNYGKENIPGNYPFFS---------VEGESIHEVA 154 Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 +GP H Q GEE++ +GY HRG EKM + + I Sbjct: 155 VGPVHAGIIEPGHFRFQCAGEEVLHLEIQLGYQHRGIEKMLPTLPQKRFPIICESIAGDT 214 Query: 276 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 + + A+E LAGI+V +IR EL RI +H+ + D P + Sbjct: 215 SIGHGLSMCQAIEGLAGISVDRGAKIIRTTALELERICNHIGDLGALAGDAAFNPPAAYF 274 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 R + +L++ ++G R R GGV H + +L+RE L + + + Sbjct: 275 GRIRGEFLNLLQVLSGNRFGKGLVRPGGVTHIMREEQRKLIREKLLEVTGEIENICDLIF 334 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGG 455 ++ R + + A + G G RA+GI +DVR + P Y Sbjct: 335 SAHTVQARFEHTGTVQHEMAKDLGLVGYSGRASGIAYDVRNSFPTECYRELPANENRVTN 394 Query: 456 VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHF 515 D +R M++VEE+ SL+++ + + P Sbjct: 395 -GDVNSRGMVRVEEIMHSLKLINILIEESENTASEVHMQDQILAPNAFI----------- 442 Query: 516 LQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGS 575 + E +G S+ + +D R +++ PSF + + ++R Sbjct: 443 --------------ITLNEGWRGEISHCILTDKKGKVQRYKIKDPSFHNWTGLAMSLRNQ 488 Query: 576 LVSDLIVYLGSIDFVMSDVD 595 +SD + S + D Sbjct: 489 EISDFPLCNKSFNLSYCGFD 508 >UniRef50_A9A347 NADH dehydrogenase (Quinone) n=3 Tax=Thaumarchaeota RepID=A9A347_NITMS Length = 378 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 120/398 (30%), Positives = 194/398 (48%), Gaps = 25/398 (6%) Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 G+ +E M LN+GP HP + G RIV+Q+DG+ IV C PD GY HRG EKM E Sbjct: 6 PPGLALKKVDERIMTLNVGPQHPGS-GHMRIVVQIDGDYIVACDPDPGYVHRGEEKMAEY 64 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY 318 +++ + +P+ +R C PYVL E++ GI VP+R +RV+ SEL R + + Sbjct: 65 RNYITNVPHLERPVIHDSCNVLYPYVLGAEEILGIEVPERAKYVRVICSELNRCIYTMYW 124 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 ++ + +G T + DR+ + DL+E ++G R+ A F GGV +DLP ++ + Sbjct: 125 LAIYGIFLGHSTMFMWPAGDRELLIDLMEKVSGARVTHAHFIPGGVRNDLPANFEDVCLR 184 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 +++ KR+ Y N IL R+Q + A+ +GTTG+ LRA+G+D+D+R Sbjct: 185 QVNYFEKRIKEYAAVFYDNPILISRTQDTGVLSRENAIRYGTTGSVLRASGVDYDLRVKA 244 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY Y+ D V D Y R + ++ +S I+ Q L MP+ P Sbjct: 245 PYDVYDELDVHTNVLKE-GDSYARSKVPWLDMMESCNIIRQALQKMPKSGSVRTKLKPNP 303 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 K ++ +E+ +G Y+ SDG T YR ++ Sbjct: 304 KTKGPAT-----------------------VYKRVESGRGSLGCYIVSDGKTEPYRVKMS 340 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PSF +L +P + G + ++ S+++ + DR Sbjct: 341 VPSFRNLLAMPNLLIGEKLGNMPSVYWSLNYWPVEADR 378 >UniRef50_B8IYV5 NAD-dependent dehydrogenase subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IYV5_DESDA Length = 565 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 113/568 (19%), Positives = 198/568 (34%), Gaps = 17/568 (2%) Query: 38 ATRTGVPVVWIKREQLLEVGDFLKKLPKPY---VMLFDLHGMDERLRTHREGLPAADFSV 94 R V + + R + E+ D L+ + F + MD L H + P +V Sbjct: 4 DYREAVTLNKLGRHSVSELRDILRHALAGGWRVLAFFGIPDMDAPLDAHNDDTPEQPRAV 63 Query: 95 F-YHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL-- 151 +++ D R +M + + T P +++ERE ++ +G+ GHP L Sbjct: 64 SLCCILAHDGTRRLMARCTPPV--TAFVSMTPELPQLHYFEREIYEQWGVEPVGHPWLKS 121 Query: 152 -RRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENED 210 RRI P + + ++ E + + A E D Sbjct: 122 VRRI--PDSAEAAARNAAESQTSSAAPAQESAEVVPSPALTASARPQTLPYPFYRVEGAD 179 Query: 211 FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDR 270 + +GP H Q GE ++ +GY HRG E M + + + Sbjct: 180 VHEVAVGPVHAGIIEPGHFRFQCYGENVLHLEIALGYQHRGLEAMITQGPAGRRLHLLEC 239 Query: 271 IEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 + + + +E++ G +R ++R + EL R+ +H + D G + Sbjct: 240 AAGDSTVAHATAHCVLLERMTGQQPDERAQLLRRIGLELERLANHTGDLGAIAGDTGFLP 299 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 + R ++ ++ G R R GGVA+DL + + Sbjct: 300 TASWNGRIRGDFLNITASLCGNRFGRGLLRPGGVAYDLAPSECADMLARVRAAWHDARGS 359 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE- 449 L ++ R A E G G RA G+D D R P S + E Sbjct: 360 VDVMLDAVTVRNRLADTGMVEPATARELGLVGVAARACGLDVDARFHMPLS---DLPCEG 416 Query: 450 -IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT-TPPPKERTLQH 507 P D R +++ EL SLR+LE L + P + + T Sbjct: 417 CAPRLEITGDVMARTLVRSRELDDSLRLLEFDLARLGALPHTKNAATAESTVSAPATAAA 476 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 T T S+ + P + ++E +G + +D +V PSF + Sbjct: 477 TNTSGTAAEAASFDALPPDTLAVALVEGWRGEVCHVGLTDSRGRLLVYKVVDPSFHNWAG 536 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + A+RG+ +SD + S + D Sbjct: 537 LAMALRGNQISDFPLCNKSFNLSYCGHD 564 >UniRef50_B8J7E4 NADH-ubiquinone oxidoreductase chain 49kDa n=14 Tax=Bacteria RepID=B8J7E4_ANAD2 Length = 521 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 110/507 (21%), Positives = 182/507 (35%), Gaps = 52/507 (10%) Query: 89 AADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGH 148 V L R +L +A+ P+ P A +ERE + +G+ +GH Sbjct: 66 GGGVLVTAVLADDPEGRLALLATRVADA---FPSIAAELPAAQAFERELAEQWGLRPEGH 122 Query: 149 PNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTEN 208 P L+ PLR + P RA PF + + E F E Sbjct: 123 PWLK-----------PLRFEPPRRAAP-DPFGRQDPRATIPGEYPFF---------RVEG 161 Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E+ + +GP H Q GE + +GY HRG E++ + Sbjct: 162 EEVHEVAVGPVHAGIIEPGHFRFQCHGERVFHLEIVLGYQHRGVERLLRGGPDRRSMALA 221 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 + I + + Y AVE LAG+ R +R + EL RI +H+ + DVG Sbjct: 222 ESIAGDTAVGHGLAYAKAVESLAGVAPTARAMSLRGIGLELERIANHVGDLGALAGDVGF 281 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 + + R + + V I G R + GGV HDL R L + ++ Sbjct: 282 LPTASYCGALRAEFLNAVAEICGNRFGRSLVCPGGVKHDLDAEAARALAARVRAAWEKTR 341 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 ++ ++ R +G A G G RA+G+D DVR+ + Y F Sbjct: 342 RAASLMFESPSVRARFEGTGTVPTALAQALGMVGPAARASGVDRDVRRDHAFGIY-RFSH 400 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 D R ++++ E +S+ + L +P GP + Sbjct: 401 VAVTTAENGDVLARALIRLLEAERSVEFVLDQLERLPGGPSRT----------------- 443 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI 568 + GP+ P M+E +G ++ +D +V+ PSF + + Sbjct: 444 ----------APGPLAPGALVVSMVEGWRGEIAHVAVTDAQGRLEAYKVKDPSFHNWFGL 493 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVD 595 A+R +SD + S + + D Sbjct: 494 AMALRDGQISDFPLCNKSFNLSYAGHD 520 >UniRef50_D1YVS8 Ech hydrogenase subunit E n=1 Tax=Methanocella paludicola SANAE RepID=D1YVS8_METPS Length = 360 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 101/386 (26%), Positives = 169/386 (43%), Gaps = 29/386 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + GP HP R+ L DGE I D + GY HRG EK E ++ ++R+ Sbjct: 3 TTIQFGPQHPVWIEPLRLKLTTDGELIKDVDLEAGYVHRGLEKKFE-WDYNKAAYLSERV 61 Query: 272 EYLGGCVNEMPYVLAVE-KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 + + + L VE +AG+ +P R +IR ++ EL R++SH L I ++ +G Sbjct: 62 CAICTQHHSTCFCLGVEGTMAGLELPRRAAIIRTIMLELERLHSHFLAIGLTLEAIGFEN 121 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 F R+++ D+ E TG R+ +GGV ++ + + +F D + KR Sbjct: 122 MFMLCFRHREQVLDVFERTTGNRVLHGINIVGGVTRNIGPEMAKEILDFCDDIEKRAHEI 181 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 E+ + + +K R QGV K A E G G R + + +DVR A P+ Y Sbjct: 182 ERIIVSSYTIKQRMQGVGVMTEKMAKELGVVGPVARGSNVPYDVRHAAPHLLYREVKVT- 240 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 P+ DC+ R +++V EL QS+ ++ Q + + P Sbjct: 241 PIVEKDGDCWARSLVRVRELFQSIDLIRQLVPLLDGTP---------------------- 278 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 + MP E+ +EA +G YY+ S R +VRT ++ + I Sbjct: 279 ----DELFAKSKAMPEGENIARVEAPRGELFYYVRGKKSKELDRVKVRTSTYGNGLGIAP 334 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 I+GS ++D+ + + D + DR Sbjct: 335 LIKGSHIADVGLITITFDPCIGCFDR 360 >UniRef50_D0L1P0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=2 Tax=Gammaproteobacteria RepID=D0L1P0_HALNC Length = 518 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 118/572 (20%), Positives = 203/572 (35%), Gaps = 63/572 (11%) Query: 31 PDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAA 90 P++ T + ++ ++LLE L L D R++ A Sbjct: 4 PESSTERPIELLFETQTLRPDKLLEAAQSLLDD------LGDTPSAHGRIQCAYALRDAE 57 Query: 91 D-FSVFYHLISIDRNR--DIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDG 147 FSV Y +IS N+ I ++ + +P+ + P WYERE DL+GITF Sbjct: 58 GKFSVRY-IISQGANQPWGIW---SVDASSGTLPSLANVLPLLGWYEREIQDLYGITFTD 113 Query: 148 HPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRG 205 HP +++ + + PL+ + +A E + Sbjct: 114 HPEPYPLILHEGFIPAKPPLQTGFDPKAEPIR------------------GQAEPFAEAN 155 Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 +D L GP + + V GE I+ P + Y HR E E + Sbjct: 156 MVGDDIQRLPFGPIRADVVESAQFVFHYIGEGILHYHPRLFYKHRAMEARFEGVPISAAC 215 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 +R+ + + + + A+E G P R RV+L+EL R+ +HL + + Sbjct: 216 VLAERVSGVDSVAHVLAFSQAMEAALGWQAPLRAQAWRVVLAELERLYNHLQFFGHLAKT 275 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 +++ + +TG R GG+ DL L L+ + Sbjct: 276 TTLKVAEAEGIWLEEQVKQINGRLTGSRFLRGVIVPGGLRRDLDA---TALIADLNALQP 332 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 ++ Y R + A + G TG RA+ +D D+R+ Y+ Y Sbjct: 333 QIEDYLDTLANTRSYLDRLLTTGVLPRQVAFDQGATGPIERASDLDRDLRRDHGYALYPE 392 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 F +P D R ++ +E+RQSL ++ Q LN + GP PP Sbjct: 393 LQFAVPTATE-GDADARARVRDQEIRQSLHLIRQALNKLEPGPICRTESTIDPPM----- 446 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD-GSTMSYRTRVRTPSFAH 564 EA +G Y + D + R +++ PSF++ Sbjct: 447 --------------------EGMGLGWAEAVRGGLIYAVHWDAKTERLTRVKIKEPSFSN 486 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + P + S + D + S ++ DR Sbjct: 487 WRVFPFTVNDSNMMDYAINEASFGLSVAGADR 518 >UniRef50_C7I0C0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Thiomonas intermedia K12 RepID=C7I0C0_THIIN Length = 532 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 106/486 (21%), Positives = 183/486 (37%), Gaps = 46/486 (9%) Query: 112 ALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPA 171 + D +P+ P WYERE DL+G+ F+GHP +++ + P Sbjct: 92 RVRPEDRTLPSLANKLPLLGWYEREMMDLYGLRFEGHPEPNPLVLHEGEPRDP-----AP 146 Query: 172 RATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVL 231 A+ F P + L + + D L GP + + + Sbjct: 147 LASGFDPAAPARDYAPLP-----------PIVPQVQGPDIQRLPFGPVRADIVESAQFLF 195 Query: 232 QLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLA 291 GE I+ P + Y HR E + + + +R+ + + + + AVE Sbjct: 196 FYIGEGILHYHPRLFYKHRAMEGRFQGATLATGAVLAERVSGIDSVAHALAFAQAVEGAM 255 Query: 292 GITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITG 351 G P R +RV+L+EL R+ +HL Y+ + +++ + +TG Sbjct: 256 GWRAPPRARYLRVVLAELERLYNHLHYLGHLSKTTTLKVGEAEGHLLEERVKQINGRLTG 315 Query: 352 FRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYG 411 R GG+ DL L + LD + + Y + R Sbjct: 316 SRFLRGLITPGGLRRDLD---ITGLDKALDSVNDEIDRYLQRLENTRSHLDRLMTTGRLE 372 Query: 412 AKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELR 471 + A + G G RA+ +D D+R+ PY+ YE F +PV G D + R M+++EE+R Sbjct: 373 RQVAFDQGACGPIERASNLDRDLRRDHPYANYEKVRFSVPVQQG-GDAHARSMVRMEEIR 431 Query: 472 QSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQ 531 +SL I+ Q + G + P E Sbjct: 432 ESLAIIRQTIGRTKPGEVLRFDVMED-------------------------ADPQGEGLG 466 Query: 532 MIEATKGINSYYL-TSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFV 590 +EAT+G Y + S+ T R +++ PSF++ + P + S + D + S Sbjct: 467 WVEATRGGLLYAVHLSEDRTRLQRVKIKEPSFSNWRVFPFTVEDSNMMDYAINEASFGLS 526 Query: 591 MSDVDR 596 ++ DR Sbjct: 527 IAGADR 532 >UniRef50_C7DI97 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI97_9EURY Length = 387 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 115/400 (28%), Positives = 195/400 (48%), Gaps = 25/400 (6%) Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 + +EN M +N+GP HPS HG R+++ +DG+ I + IG+ HRG EK+ E Sbjct: 12 RGARTTQKSENMPVMRINVGPIHPSTHGVLRLLVDVDGDTIENMTCHIGFLHRGVEKLME 71 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 + + YT++++Y+ + YV VE V + RV++ E RI SHL Sbjct: 72 NRMYMQSPSYTEKLDYVAPLGWDDLYVHTVELALQKEVKETAKYARVIIMEFQRIASHLF 131 Query: 318 YISTFIQDVG-AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 +I D+G T +AF +R + +E I+G RM R+GG+ LP + Sbjct: 132 FIGALCNDIGQMFTMFMWAFRERDAVLKFLEDISGSRMFYVNMRVGGLMRPLPDDFYDRA 191 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 + +++ ++ Y+ N+I R++G+ KEA+++G +G LRA+G+++DVRK Sbjct: 192 YKLTEYIEYKVKGYKDVIDDNSIFMERTKGIGTISKKEAIDFGLSGPNLRASGVEYDVRK 251 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 PY Y+ F++P D Y R ++ EE+ +S++I+ Q L+ MP P+ Sbjct: 252 EYPYYAYDRLKFKVPTS-NAGDGYARYKMRYEEIFESIKIIRQALDKMPRDNDVVGLPIK 310 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 P+ + + +I H E +G Y+ D YR R Sbjct: 311 LIGPEAKP----DIVINH------------------HELPRGEGIIYMVPD-KQKPYRIR 347 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +R+P F L + +G+ +DL G++D VM++VDR Sbjct: 348 LRSPVFISLSALEHICKGAKFADLFSIAGTLDVVMAEVDR 387 >UniRef50_A4XCQ7 NADH-quinone oxidoreductase subunit D 2 n=22 Tax=Actinomycetales RepID=NUOD2_SALTO Length = 388 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 136/418 (32%), Positives = 222/418 (53%), Gaps = 32/418 (7%) Query: 181 LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVD 240 +T D ++ LT G + GT+ M LN+GP HPS HG R+ L LDGE +V Sbjct: 1 MTGMTTDADLRELTVGTGAGGEQLGTD----MVLNIGPQHPSTHGVLRLRLVLDGERVVS 56 Query: 241 CVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVN 300 P +GY HRGAEK+ E + + I +R ++L NE+ VLAVE+L G+ VP+R Sbjct: 57 AEPVVGYMHRGAEKLFEVRDYRQIIVLANRHDWLSAFANELGVVLAVERLLGMEVPERAT 116 Query: 301 VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFR 360 +R+ L+EL R+ +HL+++ ++ ++GA+TP+F+AF +R+ + +E ++G R+H + R Sbjct: 117 WLRMALAELNRVLNHLMFLGSYPLEIGAITPMFYAFRERETLQTALEEVSGGRIHYMFNR 176 Query: 361 IGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGT 420 +GG+ ++P GW R + + + L + +N I R+ GV A +A +G Sbjct: 177 VGGLKEEVPAGWTGRARAAIGEVRRSLPDLDNLIRRNEIFLARTVGVGVLSAAQAAAYGA 236 Query: 421 TGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQC 480 +G RA+G+D D+R+ PY Y+ D + V DC++R + ++++ SL + EQC Sbjct: 237 SGPVARASGLDLDLRRDEPYLAYDQLDVPV-VTRTAGDCHSRFEVLLDQVYVSLDLAEQC 295 Query: 481 LNNMPE--GPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG 538 L+ + GP P P ++ E G Sbjct: 296 LDRVDRLTGPINTRLPKVLKA-------------------------PEGHTYAWTENPLG 330 Query: 539 INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 IN YYL S G +R ++RT S+A++Q + + G LV DL+ LGS+ FV+ D+D+ Sbjct: 331 INGYYLVSRGEKTPWRLKLRTASYANVQALATLLPGCLVPDLVAILGSMFFVVGDIDK 388 >UniRef50_C8XAS3 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAS3_NAKMY Length = 506 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 109/511 (21%), Positives = 195/511 (38%), Gaps = 53/511 (10%) Query: 89 AADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGH 148 V Y ++ + L + D H+P+ L A +ERE DLFGI DGH Sbjct: 44 GGTLRVVYVFTRAGTDQRVELTLRCDPADPHLPSLAGLSFPAGRFEREIRDLFGIVPDGH 103 Query: 149 PNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGT 206 P R++ W HP+R+D A PF Sbjct: 104 PMPSRLVRHFHWPRGWHPMRRD----AGPPPPFGDVDGPYPFR---------------TV 144 Query: 207 ENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 E + +GP H G + GE +++ + + HRG EK+ ++ + + Sbjct: 145 EGPGVYEIPVGPVHAGMIGPGHFRFSVVGETVLNLKARLWFVHRGLEKLFAGRAVAAGVE 204 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 +R+ + + YV AVE +G+T+ IR +L EL R+ +H+ I DV Sbjct: 205 LAERVSGDTTVGHALAYVRAVEDASGVTLDPAAQRIRAILLELERLYNHIGDIGALANDV 264 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 G A R+++ + +A+TG R+ +GGV + L + Sbjct: 265 GHGILNNHALRIRERLLRINDAVTGHRLMRGAIVVGGVRVRVLPDAGE-----LAAVAAD 319 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG--YE 444 A AL +++++ R G A ++A++ GT G RA+G+ D R P G Y+ Sbjct: 320 CAEVVDLALGHSVVRDRFTGTAMLSHRQAVDLGTLGYVARASGVAVDARFDHPVPGLVYD 379 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 + + D +R +++ +E++ S+R++ Sbjct: 380 PAE-RLSTHPTDGDVASRFLVRAQEIQSSVRMI------------------------AAL 414 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 ++T + S ++E +G + + D R R+ PSF + Sbjct: 415 AGQVDTTAPREVGGSTSSAAGVRAGVGIVEGWRGTIVHRVELDADGRLTRVRIVDPSFFN 474 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +P A+ ++V D + S + + D Sbjct: 475 WPALPLAMADTIVPDFPLANKSFNLSYAGND 505 >UniRef50_B1YB08 NADH dehydrogenase (Quinone) n=5 Tax=Thermoproteaceae RepID=B1YB08_THENV Length = 407 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 115/388 (29%), Positives = 180/388 (46%), Gaps = 8/388 (2%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E + + +GP HP + G R+ + LDG+ I + VPD G+ HRG EK+ E + + + IP Sbjct: 28 ERGLVVVVGPQHPGS-GHMRLFVVLDGDIIKEVVPDPGFVHRGVEKLAENRPYWTLIPLV 86 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 ++ + +P LA+EK G+ P R +R ++EL RI +HL ++ +G Sbjct: 87 EKASIMDSMNITLPITLALEKALGLEPPPRAKYLRTAMAELSRIRTHLYDLALLGIFLGH 146 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T + F ++ ITG R A+ GGV D+ R + + L ++L Sbjct: 147 STAFMWGFALMDLYAEVFAKITGARTTVAYPVPGGVRRDVKREHIEAVEKLLRKTEEKLR 206 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 ++ L N + K R +GV AK A E G G RA GID DVRKA PY Y DF Sbjct: 207 DFKTVFLDNPVTKARLEGVGVVDAKRAAELGVVGPFARAAGIDHDVRKAAPYDAYPELDF 266 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 E+ V D RV+++ E+ S+ I+ Q L N+PEG L P R Sbjct: 267 EV-VTEKAGDAMARVLVRWREMYVSMDIVRQALKNLPEGDVIDQALLFKNPEYRREGMGG 325 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI 568 + ++ G E+ + +L + G+ YR R TPS+ +L+ + Sbjct: 326 VLGVYTYMYPEPGEYAAVAEAARG------ATYIHLWTTGTQRVYRMRYVTPSWRNLKAM 379 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 A+RG ++D+ S + + DR Sbjct: 380 AEAMRGERLADMPAVYMSFGYFPPEADR 407 >UniRef50_B6AS24 Putative NADH-ubiquinone oxidoreductase, 49 kDa subunit n=2 Tax=Leptospirillum sp. Group II RepID=B6AS24_9BACT Length = 499 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 101/489 (20%), Positives = 166/489 (33%), Gaps = 52/489 (10%) Query: 107 IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLR 166 +L+ +++ P+ T LFP A+ ER D++G +G + R + GH Sbjct: 62 FVLRSPVSKESGTFPSLTALFPLASRPERAVRDVYGWIPEGLSDTRPWIRQDDHGGHGSG 121 Query: 167 KDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGA 226 K+ PF + E + +GP H Sbjct: 122 KERSPEGGRDYPFV------------------------RVDGEGVHEIPVGPVHAGIIEP 157 Query: 227 FRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLA 286 Q+ GE+++ +GY H+G + + + RI + + A Sbjct: 158 GHFRFQVVGEKVLRMEERLGYTHKGIRGLLAHRPVGDVTRLSSRISGDSAVAFQWAWAQA 217 Query: 287 VEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLV 346 VE + P+R +R +L E RI +HL + D G + ++ + Sbjct: 218 VECATQTSPPERAVWLRAILLERERIANHLGDLGALGNDAGFAFGLVQFGRLKEDLLRTN 277 Query: 347 EAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQG 406 I G R GGVA D G LR L + + + + ++ L+ R G Sbjct: 278 GQIFGHRYLMDTICPGGVAVDPGDGALSRLRSELPRLQEEIHVLKTIYDEHGGLQDRFAG 337 Query: 407 VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLK 466 A WG G RA+G D+R P Y+ + + D RV ++ Sbjct: 338 TGVLDPLLAGAWGLGGVVGRASGQLLDLRHDHPVRPYDIERVPVALAKR-GDVGARVQVR 396 Query: 467 VEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPA 526 +E+R SL LE L + P GP + P Sbjct: 397 FQEIRHSLAFLESVLASFPPGPAR---------------------------RGLVCRSPK 429 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 E F IE +G ++ D PS+ + A+ G+LV+D + S Sbjct: 430 AEGFGWIEGFRGEVLAWVRLDRDGNVEDAHFHDPSWLLWPALERAVPGNLVADFPLINKS 489 Query: 587 IDFVMSDVD 595 + S D Sbjct: 490 FNLSYSGHD 498 >UniRef50_C6PUG2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG2_9CLOT Length = 526 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 123/578 (21%), Positives = 213/578 (36%), Gaps = 57/578 (9%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGD-FLKKLPKPYVMLFDLHGMDERL 80 I + + + V ++ + + FL K ++ F +D Sbjct: 3 IDLFKEELSNLKYNSEIKNKNEIYVDVEISHVKSLISLFLVKYKLKFIAQF---CVDNSN 59 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 + + DF + L + + ++++ E + TF + ++ +ERE DL Sbjct: 60 EENAQ----NDFMINIILSNSKKRYFVIVRYKTQEE---IKTFQDILFQSHLFEREMCDL 112 Query: 141 FGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 FG+ + R+I+ + W +PLRK +P AK + + E L +K + Sbjct: 113 FGLKIKDGIDTRKIVKHEKWPEDVYPLRKSFPY-----------GAKLEEKNEILPYKCK 161 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 E + +++GP H + GE I + + Y HRG EK+ E Sbjct: 162 EAF------GDGAYQISVGPVHAGIIEPGHFRFSVIGEAIENLELRLNYKHRGIEKICEN 215 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY 318 +R+ Y L VEKL P + +RV+L EL RI + L Sbjct: 216 VDASKLNLVFERMACESSAAYAESYALLVEKLLSYDTPQEIKALRVVLLELERIYNFLGD 275 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 IS D+G P ++I+ L E ITG R G+ D + +++ Sbjct: 276 ISGICVDIGFSYPAKRFGAFGEQIHKLCERITGSRFMRNVIIPCGINIDFTKEHIEDIKK 335 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 L+ M KR+ + L + R + K A + TG RA+GI++DVRK+ Sbjct: 336 TLNGMKKRMDKIIEITLDSVSFLDRVENTGIVRNKTAKKLYMTGITGRASGINYDVRKSF 395 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY Y + + + R LK++E+ + + L+ + + K Sbjct: 396 PYEIYGILK-KNNNTLEIGGVFERYKLKIKEIYDAYNFIFASLDFINKDILKTK------ 448 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 T F V E+ +E KG Y R + Sbjct: 449 --------------TEFKLVEE------TEALAAVETVKGELIVYGKVGKDNKFNRIYFK 488 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 TPS + + A+ G +V D + S + S+ D+ Sbjct: 489 TPSVTNWNGLTYAVLGEIVPDFPLCNKSFNMSYSENDK 526 >UniRef50_D1LDT9 NADH dehydrogenase subunit 7 (Fragment) n=2 Tax=Euplotidae RepID=D1LDT9_EUPCR Length = 462 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 131/413 (31%), Positives = 202/413 (48%), Gaps = 31/413 (7%) Query: 207 ENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 E +N GP HP++HG R VLQL+GE I +IG+ HRG EK+ E++++ +P Sbjct: 57 EQTQTFMMNFGPQHPASHGVLRFVLQLEGEYIRHADANIGFLHRGTEKLIEQRTYLKSLP 116 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAG--------ITVPDRVNVIRVMLSELFRINSHLLY 318 Y DR++Y+ E Y LA+E L G + V R + EL R+ +H L Sbjct: 117 YFDRLDYVSMMSQEHAYCLAIENLLGSSTFTSFFVQV-------RALFDELTRLMNHFLG 169 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAH-DLPRGWDRLLR 377 IST DVG M+P F+AF +R+++ + E ++G RMH A++R + L + L Sbjct: 170 ISTHSLDVGNMSPAFWAFEERERLMEFYERVSGARMHAAFYRPNDLDWTGLNYQFFIDLL 229 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR-- 435 FL+ K + N I + R + + + +G R+ G D+R Sbjct: 230 FFLNNTYKSITEMFVILATNNIWRSRLVRIGVVDNAQVPLFAASGVVSRSAGFKKDLRIL 289 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM-------PEGP 488 K YS Y G + DCY R ++++ E+ +S+ I+ Q ++N+ P Sbjct: 290 KTSTYSYYWFLKLR-SFLGKMGDCYDRFIIRIREMLESVFIIYQIISNLLVVFESTTALP 348 Query: 489 FKADH-----PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYY 543 F + T + +E LITHF S G +PA +Q +EA KG Sbjct: 349 FWYNTESYVSATFTKSQFNKKSTSMEALITHFKHYSEGIKVPAGLVYQSVEAPKGEFGVS 408 Query: 544 LTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 L SDGS+ +R ++RTP++ HLQ + + IRG +D+I LGS D V +V R Sbjct: 409 LISDGSSKPFRCKIRTPAYHHLQFMSSQIRGHFFADMITILGSQDIVFGEVIR 461 >UniRef50_A6DAC0 Carbon monoxide-induced hydrogenase, large subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC0_9PROT Length = 358 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 99/385 (25%), Positives = 180/385 (46%), Gaps = 30/385 (7%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDG-EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 +N+GP S L +D E + D G+ HRG E + ++++ + T+R+ Sbjct: 3 KINIGPFLASLEEPIYFKLDVDDNEIVRDVEIVNGFVHRGLEALTMQKNFFQNLILTERL 62 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 L + Y LA+EK+A I V R + +RV+ E+ RI S++ +S V Sbjct: 63 CALCSNNHPFSYCLALEKIAEIEVSKRADYLRVIADEVKRIASNMFNLSMLAHLVHDYEL 122 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + R+ + D+ E I G RM + IGGV ++L + + L+ + + Sbjct: 123 MRDTMDTREIMQDVKETIWGNRMDLSAVTIGGVKYNLDKQKSEFILNSLEKIEPLVDKLF 182 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + + +K ++G+ ++ALE+G +G R +GI+ DVR PY+ Y+ + + Sbjct: 183 ERFCNSEKIKK-TKGIGVLTKQQALEFGVSGPVARGSGINNDVRVKAPYAAYDELEVRVD 241 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 + D Y+R+ ++ +++ +++IL+ +NN+P GP + Sbjct: 242 L-ESDGDVYSRMKVRWYDIKNAIKILKNAINNLPSGPIHLEKR----------------- 283 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 P +PA E+ EA +G YY+ +DG R R R P++ + Q + Sbjct: 284 ----------PHIPAGEATVRTEAPRGELIYYVKTDGGQKPKRMRWRVPTYMNFQALEEM 333 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 I+G+ SD+++ L SID +S DR Sbjct: 334 IKGNRASDVVLILNSIDPCVSCTDR 358 >UniRef50_A9BJL6 NADH dehydrogenase (Quinone) n=3 Tax=Thermotogaceae RepID=A9BJL6_PETMO Length = 369 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 123/386 (31%), Positives = 194/386 (50%), Gaps = 23/386 (5%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 L LGPNHP HG F + + +DG+ IV P G HRG EK+ ER+ W + + RI Sbjct: 5 KLYLGPNHPGMHGNFSVHMYVDGDTIVRARPMPGMLHRGFEKLMERRLWMNNLALIPRIC 64 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 +NEM Y +A+E+L GI VP++ + IR+++ EL RI +HL+ + VG T Sbjct: 65 VPEPDINEMVYAMAIEELTGIEVPEKAHWIRMIILELARIANHLMSLGGIGGPVGLYTGP 124 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 + DR I D+ E ITG R++ + GGV DL ++ FLD++ RL YE Sbjct: 125 NWGLADRDLILDIFEEITGARIYHMYIVPGGVRKDLREETIEKIKSFLDYLENRLPEYED 184 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR-ATGIDFDVRKARPYSGYENFDFEIP 451 L+N++ + R++ A+ E G TG G+R A G +D+RK PY+ Y+ +F +P Sbjct: 185 LILKNSLFQRRTKDKLLLPAEVVWELGVTGIGMRSAVGEAYDIRKVDPYARYDQVEFYVP 244 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 SD YTRV K E QS++I+ Q L MP+ + Sbjct: 245 TA-NYSDGYTRVYFKYLETYQSIKIIRQVLEKMPQ------------------KGKVWNK 285 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH-LQQIPA 570 I++ + W +P + + +E +G YY+ S+G YR VR S+ L + Sbjct: 286 ISNGSALRW--RVPKGQVYTHVECARGEYGYYMVSEGEDKPYRVAVRGASYPQGLLGVEK 343 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G+ + D +++ ++ ++DR Sbjct: 344 YLPGTRIEDAALWMDTMGVCPPEIDR 369 >UniRef50_D2L9H0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9H0_9DELT Length = 494 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 101/477 (21%), Positives = 170/477 (35%), Gaps = 56/477 (11%) Query: 119 HVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSP 178 P+ T P +W+ERE ++ +GI DGHP L+ I R P A P Sbjct: 73 RYPSLTPDCPQCHWFERELYEQWGILPDGHPWLKPI-----------RFTTPPGAGRPRP 121 Query: 179 FELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEI 238 E+ + +GP H Q GEE+ Sbjct: 122 APGVT------------------DYFQVRGEEVHEVAVGPVHAGIIEPGHFRFQCFGEEV 163 Query: 239 VDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDR 298 +G+ HRG E M + + + + + + +E L+G T P R Sbjct: 164 FHLEISLGFQHRGIEAMLAGGPDPRTVHFMETAAGDTSIGHSLAHAAVIEALSGRTAPPR 223 Query: 299 VNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAW 358 I EL R+ +H + DVG + + + R ++ + G R Sbjct: 224 GRAIGRAALELERLANHTGDLGALAGDVGFLPTLSYCGRIRGDFLNMTALLCGNRFGRGL 283 Query: 359 FRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEW 418 R GG A D+ G R+L L+ + + ++ + R +G A++AL+ Sbjct: 284 VRPGGTAFDVDTGLLRVLAGRLEAARRAAFGAAELLFASSTVLARFEGTGKLTAEKALDL 343 Query: 419 GTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILE 478 G G RA G+ D R+ P G D + + D Y R +++ E+ SL L+ Sbjct: 344 GLVGPPARACGLARDARRTFPQPGAGARDIALSL-HDFGDVYARGLVRRLEMEASLDFLD 402 Query: 479 QCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG 538 L ++P+GP + P G + P + +IE +G Sbjct: 403 GLLADLPDGPTRELLP--------------------------GRLPPGRLAVGLIEGWRG 436 Query: 539 INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + + ++ PSF + + A+RG +SD + S + D Sbjct: 437 EIRHVAVTGPDGRFLAYKIIDPSFHNWFGLAQALRGQQISDFPLCNKSFNLSYCGHD 493 >UniRef50_C1XWY7 Ni,Fe-hydrogenase III large subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY7_9DEIN Length = 426 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 107/481 (22%), Positives = 184/481 (38%), Gaps = 57/481 (11%) Query: 115 ENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARAT 174 E P+ + FP +W+ERE W+ G+ +GHP+L+ PLR + + Sbjct: 2 EAQGSFPSLAEEFPALDWFERELWEDHGLVPEGHPSLK-----------PLRNHHSVYSR 50 Query: 175 EFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLD 234 + P + + + E + +GP H + Sbjct: 51 QAVPKGIVRLPYPFD-----------------RVEGLHEVPVGPVHAGIIEPGHFRFSVL 93 Query: 235 GEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT 294 GE I+ +GY HRG E++ + +S + +R + + + AVE G+ Sbjct: 94 GERILHLEVRLGYQHRGVEQLFQGKSLEQALLLAER-AGGEPVAHALAFCQAVEAALGVE 152 Query: 295 VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRM 354 VP R +R +L EL R+ HL +++ D+G R + +E +TG R Sbjct: 153 VPPRAYRLRRVLLELERLFGHLGHLAGLFTDIGYAYAATQVGKVRALLQGQLERLTGHRY 212 Query: 355 HPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKE 414 +GGV D+ +R L + ++ AAL++ ++ R + V + Sbjct: 213 GRNALTVGGVGFDIDPETQVEVRGALAKLAAEAETHLAAALKHPMVLDRLRYVGTLTQAQ 272 Query: 415 ALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSL 474 A G G RA G+ D+R+ + Y+ F PV D R + EELRQ Sbjct: 273 ARWLGLVGPAARACGLGRDLRQDD--ALYQTF---TPVVRSGGDVLARAQVYAEELRQGF 327 Query: 475 RILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIE 534 L++ L +P+G P T E++ +E Sbjct: 328 VYLDRFLGALPQGEVANGPTTPRVDPVPATA----------------------EAYSRVE 365 Query: 535 ATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 A +G Y++ G R ++ PSF + + + A+RG + D + S D + Sbjct: 366 AGRGELFYWVRLRG-NRVERVKIVDPSFKNWRALELAVRGMGLPDFPIINKSFDLSYAGC 424 Query: 595 D 595 D Sbjct: 425 D 425 >UniRef50_C6NX38 Ni,Fe-hydrogenase III large subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX38_9GAMM Length = 527 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 102/501 (20%), Positives = 180/501 (35%), Gaps = 49/501 (9%) Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 H + + + + L N P+ + +FP A ER DL G+ G+P++R + Sbjct: 73 HAFFLTESGYLWCTLPLPANLREFPSLSSVFPTACRQERAIRDLLGLEPLGNPDMRPWLR 132 Query: 157 PQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL 214 W HPL A D+ + L+ E R +D + Sbjct: 133 HAAWPANIHPL------------------AMSDIPEDILSCAGEIDYSYRAPAGQDLHEI 174 Query: 215 NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYL 274 +GP H GE+IV +GY H+G E++ Q + + R+ Sbjct: 175 PVGPVHAGTIEPGHFRFTCLGEQIVQLEERLGYCHKGIERLFVGQPPDAALRLAGRVSGD 234 Query: 275 GGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFF 334 Y +AVE +A I + R +R + E R+ +HL + D G + Sbjct: 235 SSVAYAWSYAMAVESVAEIELSQRALALRGLCLERERLANHLGDLGALGNDAGLAFALTQ 294 Query: 335 AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAA 394 ++++ I G R ++GGVA DL + + + +RL + + Sbjct: 295 LLAIKEELLRENAEIFGHRYLMDVVQLGGVAVDLDGRALQHIEQSSKAWRRRLETLDLLL 354 Query: 395 LQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGG 454 ++ L+ R A+ A WG G RA+G +D+R Y+ + EI + Sbjct: 355 QEHAGLRDRLVATGPITAERAAYWGMAGLSGRASGQAWDLRTHFAPPPYDRYPMEISLAR 414 Query: 455 GVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITH 514 D R ++ E+ + LR E + N+P G + Sbjct: 415 R-GDVAARWAVRFAEVFRCLRWQENVVANLPGGSPR------------------------ 449 Query: 515 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRG 574 V+ E + E +G L + ++ R PS++ + A+ Sbjct: 450 ---VALKAFPKDGEGLGICEGWRGEVFVALRLEDGHIA-RCHPHDPSWSLWPVLEEAVCQ 505 Query: 575 SLVSDLIVYLGSIDFVMSDVD 595 +V+D + S + S D Sbjct: 506 DIVADFPLINKSFNLSYSGQD 526 >UniRef50_D2LH96 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LH96_RHOVA Length = 504 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 100/495 (20%), Positives = 167/495 (33%), Gaps = 61/495 (12%) Query: 101 IDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW 160 D + V+L+ P+ P A ER DL+G DG P+ RR + W Sbjct: 70 WDAQENCRAIVSLSLKAGAYPSVGLHHPPALRLERAMRDLYGAIPDGIPDERRWLDHGVW 129 Query: 161 KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNH 220 G + E E + +GP H Sbjct: 130 PGR--------------------------------EHEPGYHFLPVEGNGLHQIPVGPVH 157 Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 +GE + +GY H+G E + + S R+ Sbjct: 158 AGIIEPGHFRFTANGETVARLEARLGYVHKGVEALAQGASIEKAAKLAARMSGDSTVAYS 217 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQ 340 + AVE G +P R ++R +++EL R++ H+ + D + R+ Sbjct: 218 FAFSRAVEAALGWEIPPRAQILRGVMAELERLSHHVSDVGGICNDAAVAVLLARCSLIRE 277 Query: 341 KIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTIL 400 I A+ G RM GGVA D+ + L+ + +A Q+ + Sbjct: 278 DILRTQAALFGHRMMMDAIVPGGVARDIDAAGATAILALLERIEIGFHRVVRAYDQSPSI 337 Query: 401 KGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCY 460 + R+ G ++ G RA G FD R + PY Y F++P SD Sbjct: 338 QNRTHGTGIVQLDFIRQFAAGGFVGRAGGRAFDARASFPYPPYNAVAFKVPT-REESDVD 396 Query: 461 TRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSW 520 R+ +++EE+ +S I+ Q L + +GP A P P Sbjct: 397 ARIWIRIEEIAESAGIIRQLLAKLEDGPIHAAPPPFQP---------------------- 434 Query: 521 GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDL 580 ++EA +G + + + R S+ + AI G++V+D Sbjct: 435 ------GAGAALVEAFRGDLFLAVRIEDESRIAHMHARDASWFQWPLLETAIDGNIVADF 488 Query: 581 IVYLGSIDFVMSDVD 595 + S + S VD Sbjct: 489 PLCNKSFNCSYSGVD 503 >UniRef50_B9L8U2 Ech Hydrogenase, Subunit n=3 Tax=Epsilonproteobacteria RepID=B9L8U2_NAUPA Length = 361 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 90/386 (23%), Positives = 158/386 (40%), Gaps = 30/386 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ-SWHSYIPYTDR 270 + + G H + + + E I D +IGY HRG EK + + R Sbjct: 5 IIVPFGSQHVALPEPVSFLFETQNEVITDVTVNIGYVHRGIEKAAITRFEYTQLPYLVAR 64 Query: 271 IEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 + L + Y +EKL GI +++ +R+++ EL RI+SH+L + VG Sbjct: 65 VCGLCSITHAGAYTHGIEKLLGIETNKKIDYLRMLVVELDRIHSHMLANGHVAEVVGYEN 124 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 F R+ + D++E ITG R+ + IGGVA D + + RE L + Sbjct: 125 LFMQTFRYREDVMDILERITGNRVQYDYQIIGGVARDFDKETEDFAREKLLTLKANTEKL 184 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 + + +++GV + A ++ G RA+G++ D R Y +E +++ Sbjct: 185 IEFFENDYTFALKTKGVGTISKEMAEKFNAAGPIARASGLETDARAEYDYLPFEEVGYKL 244 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 D + R M++ +E+ S+ + L+ +PEG + Sbjct: 245 QTRTE-GDVWARNMVRFDEIMNSIEMCLNILDGIPEGEHRVKVKGR-------------- 289 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 P E+F +EA +G YYL + + + R R+R P++A++ + Sbjct: 290 --------------PDGETFVRVEAPRGECFYYLKGNKTKVLERVRIRVPTYANIPVLKE 335 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 G SD + S D MS R Sbjct: 336 LFVGEKYSDAQAIVLSFDPCMSCTAR 361 >UniRef50_Q2WAW4 Ni,Fe-hydrogenase III large subunit n=11 Tax=Alphaproteobacteria RepID=Q2WAW4_MAGSA Length = 505 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 95/480 (19%), Positives = 162/480 (33%), Gaps = 51/480 (10%) Query: 116 NDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATE 175 +D + P ER D++G+T G + R + W P A Sbjct: 76 DDRRFLALGNVRPGVIRIERAIHDVWGLTPVGLEDRRHWLDHGRWPSR-----MPLAAQP 130 Query: 176 FSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDG 235 +P L+ + + +GP H G Sbjct: 131 MAPSAEPDRYPFLQ----------------AVGDGLHQIPVGPVHAGVIEPGHFRFHCQG 174 Query: 236 EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITV 295 E +V +GY H+G E + + R+ + + AVE G V Sbjct: 175 EAVVRLEQRLGYQHKGIEGLLQGAPLDKAARIVARVSGDSTVAYSLAFARAVEAATGCEV 234 Query: 296 PDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMH 355 P R + +R +++E+ R+ +H+ I D + R+K+ + + G R++ Sbjct: 235 PARAHWLRGVMAEMERVANHVFDIGAVCNDAAFAVMLSHMGVLREKVLRANDVLFGHRLN 294 Query: 356 PAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEA 415 GGV+ DL L+ L K L + L R+ Sbjct: 295 MDRIVPGGVSLDLSDEGVEALKHLLYGFGKLLEQGYQLYENTPSLSDRTVSTGIVQTSLI 354 Query: 416 LEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLR 475 +G G RA+G D R+ Y Y+ D +PV D RV+++ E ++SL Sbjct: 355 HRFGAGGFVGRASGRGHDARETPSYPPYDKLDMTVPVLTE-GDVNARVLVRFAEAKESLH 413 Query: 476 ILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEA 535 ++ + L+ MPEG + P A E + E+ Sbjct: 414 LINRMLHEMPEGAVRVPLPEV-----------------------------AGEGMGVAES 444 Query: 536 TKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +G +L + R PS+ + AAI G++V+D + S + S D Sbjct: 445 FRGEVVVWLRLGADHVVERCHPHDPSWFQWPLLEAAIEGNIVADFPLCNKSFNCSYSGHD 504 >UniRef50_C0SF51 NADH-ubiquinone oxidoreductase 49 kDa subunit n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SF51_PARBP Length = 447 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 127/434 (29%), Positives = 199/434 (45%), Gaps = 43/434 (9%) Query: 164 PLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSA 223 P D+ + P + + +N GP HP+A Sbjct: 56 PTDPDFAPGGPKHQPIK--------PPGSYAEPSALESEVGNGRKIRHYTVNFGPQHPAA 107 Query: 224 HGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPY 283 HG R++L+L+GEEIV P +G HRG EK+ E +++ +PY DR++Y+ NE + Sbjct: 108 HGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYMQALPYFDRLDYVSMMTNEQCF 167 Query: 284 VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIY 343 LAVEKL I +P+R IR M E+ RI +HL+ + + DVGA+TP + F +R+K+ Sbjct: 168 SLAVEKLLNIEIPERAKWIRTMFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLM 227 Query: 344 DLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGR 403 + E ++G R+H A+ R GGV D+P G + ++ +A +T LK Sbjct: 228 EFYERVSGARLHAAYIRPGGVHQDIPLGLLDDIYQWATH----------SATASTKLKNC 277 Query: 404 SQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE-NFDFEIPVGGGVSDCYTR 462 S + + + L T + A + G N + G + Y Sbjct: 278 SPKIVSGKLEPRNRRRFLPQRLSITALAESCSVAPLFHGMSANPNLRRLRPGRIRRAYAA 337 Query: 463 VMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGP 522 ++VE+ + S PPP+ +++E LI HFL + G Sbjct: 338 GPVRVEDYKIS------------------------PPPRAAMKENMEALIHHFLLFTKGY 373 Query: 523 VMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIV 582 +P E++ IEA KG +L SDGS YR ++R P FAHL RG L++D + Sbjct: 374 AVPPGETYSAIEAPKGEMGVFLVSDGSERPYRCKIRAPGFAHLSCFDQISRGHLLADAVA 433 Query: 583 YLGSIDFVMSDVDR 596 +G++D V +VDR Sbjct: 434 IIGTMDLVFGEVDR 447 >UniRef50_C7LSU9 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LSU9_DESBD Length = 493 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 101/510 (19%), Positives = 174/510 (34%), Gaps = 65/510 (12%) Query: 86 GLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITF 145 G+P D ++ ++++D + + P+ T P A+ +ERE W+ G+ Sbjct: 48 GVPDHDGTILVAVLALDSESILGV-ARSEPISGSYPSLTPKHPQAHLFEREVWEQHGLVP 106 Query: 146 DGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRG 205 GHP L+ P+R + A +PF Sbjct: 107 VGHPWLK-----------PVRHTF-ENAPANAPF------------------------FR 130 Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 E + + +GP H Q GEE++ +GY HRG E + + + Sbjct: 131 VEGGEVHEVAVGPVHAGVIEPGHFRFQCAGEEVLHLEIALGYQHRGIEDALQNGPHPATM 190 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 + + + + +E L G+ P R +R M EL R+ +H + D Sbjct: 191 NQIETVAGDTTIAHATAHASVLEALGGVETPLRAQWLRAMALELERLANHTGDMGALAMD 250 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 V + R +L + G R R GG HDL + L E L Sbjct: 251 VAFLPTSAACGKIRGDFLNLTALLCGNRFGRGLIRPGGCRHDLEEERLKTLTERLKAHMA 310 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 + ++ R + V +A + G G RA G+ DVR P +G+ Sbjct: 311 DVEQAMAWFWDAASVRVRFRNVGVVHPSQATDIGLVGPAARACGLVRDVRFDHP-AGWHR 369 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 F D + R ++ E+++S R L L P D P P+ Sbjct: 370 FSHSPVAVWPSGDIFARARVRSLEIQRSGRYLFDQLA----APVDGDITAALPAPQ---- 421 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 P + + ++E +G + +D ++ PSF + Sbjct: 422 -------------------PESLAVALVEGWRGEVCHVALTDYFGRFRSYKITDPSFHNW 462 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + ++RG+ VSD + S + D Sbjct: 463 TGLALSLRGTAVSDFPICNKSFNLSYCGFD 492 >UniRef50_UPI00019012E4 NADH dehydrogenase subunit D n=1 Tax=Mycobacterium tuberculosis T92 RepID=UPI00019012E4 Length = 424 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 128/364 (35%), Positives = 195/364 (53%), Gaps = 19/364 (5%) Query: 201 GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 R + + + +N+GP HPS HG R++L+++GE +V+ IGY H G EK E + Sbjct: 28 DAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGIGYLHTGIEKNLEYRY 87 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGI--TVPDRVNVIRVMLSELFRINSHLLY 318 W + + R++YL NE Y L VEKL GI +P+RVNVIRV++ EL RI+SHL+ Sbjct: 88 WTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVLMMELNRISSHLVA 147 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 ++T ++GAMTP+F F R+ + L E ITG RM+ A+ R GGVA DLP + E Sbjct: 148 LATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGGVAQDLPPNAATEIAE 207 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 L + + L + +N I K R+QGV + G TG LR+TG+ D+RK+ Sbjct: 208 ALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGPILRSTGLPHDLRKSE 267 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY GY++++F++ + D Y R M++V+E+ +S++I+EQCL+ + GP Sbjct: 268 PYCGYQHYEFDV-ITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKLRPGPTMISDRKLAW 326 Query: 499 PPK----------------ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSY 542 P + +E LI HF V+ G +PA + ++S Sbjct: 327 PADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGPGLRRGGVPPVVSSA 386 Query: 543 YLTS 546 Y S Sbjct: 387 YTWS 390 >UniRef50_A1KEQ8 Possible formate hydrogenase hycQ (FHL) n=14 Tax=Actinomycetales RepID=A1KEQ8_MYCBP Length = 492 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 106/509 (20%), Positives = 182/509 (35%), Gaps = 56/509 (11%) Query: 88 PAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDG 147 V Y ++ +R + L+ + ++ + + L A +ERE DL+GI G Sbjct: 38 DGDSLRVVYLFLAGYPDRRVELEYVVPADNPEIRSLAYLSFPAGRFEREMADLYGIRPVG 97 Query: 148 HPNLRRIMMPQTWKG-HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGT 206 HP RR++ W HP+R D A F Sbjct: 98 HPKPRRLVRHAHWPDWHPMRTDA--------------------GPAPEFTDTGAFPFLAV 137 Query: 207 ENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 E + +GP H + GE IV + + HRG EK+ + + + Sbjct: 138 EGPGVYEIPVGPVHAGLIEPGHFRFSVAGETIVRLKARLWFVHRGIEKLFHGRPATAAVD 197 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 +RI + + + LA+E GI +P ++ +R ++ EL R+ +H + DV Sbjct: 198 LAERISGDTSAAHALAHSLAIEDALGIELPHEIHRLRALIVELERLYNHAADLGALANDV 257 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 G A R+ + A+TG R+ R GGVA D L +D Sbjct: 258 GYSLANAHAQRIRENLLRRNAAVTGHRLLRGAIRAGGVALRALPDTDELAALAVD----- 312 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 LA L N+++ R G A +A G G RA+G+ D R P Sbjct: 313 LAEVATLTLANSVVYDRFAGTAVLHPDDASALGCLGYVARASGLRSDARVEHPTIVLPIT 372 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 + +G D R ++ +E S + + + + GP + Sbjct: 373 E----IGAPDGDVLARYTVRRDEFAASAALAQHIVESHT-GPIE---------------- 411 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 + PV + ++E +G + + D R +V PS+ + Sbjct: 412 ---------YAATLHPVGAPSSGIGIVEGWRGTIVHRVEIDVDGRITRAKVVDPSWFNWP 462 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +P A+ ++V D + S + + D Sbjct: 463 ALPVAMADTIVPDFPLANKSFNQSYAGND 491 >UniRef50_A3DM94 Membrane bound protein complex subunit mbxL n=2 Tax=Desulfurococcaceae RepID=A3DM94_STAMF Length = 375 Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 109/398 (27%), Positives = 179/398 (44%), Gaps = 40/398 (10%) Query: 211 FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDR 270 + + LGP HP A G L LDGE ++D G+ HRG EKM E + W + + R Sbjct: 6 VLTVFLGPQHPGAPGNVGFKLLLDGERVLDIDLIPGFLHRGFEKMMEYRRWDMDLVMSAR 65 Query: 271 IEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 I E+ Y A+E++ GI P++ +RV+++E R+ SHLL++ F + A Sbjct: 66 ICVEDPDHIELTYTHAMEQIFGIEPPEKAKYVRVIVAEFSRLASHLLWMMYFAGPIAARY 125 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 +A R++I + ++G R++ + GGV D+P + + L + + Sbjct: 126 ATSWAIAAREEILKWFDYVSGHRIYHHYIFPGGVRWDIPSDFKEKTLKVLKVIKPLIDDI 185 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 + I + R++ + +A+ G TG LR +G+ FD+RK Y Y DFEI Sbjct: 186 RDGFFYHPIFEKRARDMGRLKPGDAIRLGATGPTLRGSGVKFDLRKVLKYDAYGEIDFEI 245 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQHIE 509 P G D Y R ++++ E+ S+ I+ Q + MP EGP++ P T Sbjct: 246 P-SGEYGDSYDRALVRLREMYISMEIIRQAVEKMPTEGPYRYRLPAT------------- 291 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST--------MSYRTRVRTPS 561 +PA E +E+ +G ++ YR + R P+ Sbjct: 292 --------------IPAGEGIGRVESARGEFLAHILQRPPGARRYSKPLSPYRIKFRGPT 337 Query: 562 FAHLQQIPAAIRGS---LVSDLIVYLGSIDFVMSDVDR 596 AHL + I + ++DL V +GS D D+DR Sbjct: 338 MAHLTTVLKHIVHNEEITIADLPVLIGSFDPCPPDIDR 375 >UniRef50_A0L9R4 Membrane bound protein complex subunit mbxL n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R4_MAGSM Length = 391 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 118/413 (28%), Positives = 180/413 (43%), Gaps = 26/413 (6%) Query: 186 QDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDI 245 + + + + + ++ L GP HP G + L L G+EIVD + Sbjct: 3 YQPDRSQYPQRRVDGRLDIDLASGKYLKLWHGPQHPGITGNMSVELTLCGDEIVDAKTHV 62 Query: 246 GYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVM 305 GY HRG EK+ ER+++ P R+ NE Y AVE+LAGI P+R IR + Sbjct: 63 GYLHRGFEKLMERRTFIQCFPIVCRVCVPEPDFNEYCYAAAVEELAGIECPERARWIRTL 122 Query: 306 LSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA 365 + E+ RINS+L+Y+ G + R + D E +TG R++ + GGV Sbjct: 123 ILEMGRINSYLMYLGGQSGAFGMGVIGQWTTYIRDLMLDRFEELTGARIYHMFILPGGVR 182 Query: 366 HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGL 425 LP G+++ + E L + + N + K RS GV +G TG Sbjct: 183 DGLPEGFEQRMEETLRELESTMKDVRDVLFHNAVFKKRSVGVGVIDPAWLEPYGVTGPNA 242 Query: 426 RATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP 485 RA G+ DVR +PY Y +E VG D YTR ++ +L QS+ ++ Q L MP Sbjct: 243 RAAGVAKDVRIDQPYLVYPELSYEAIVGKDS-DIYTRADVRYRDLLQSVDLIRQILARMP 301 Query: 486 -EGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYL 544 EGP A P +P E++ E ++G YY+ Sbjct: 302 HEGPVMAKLPNVLH-----------------------WKIPQGETYIRGECSRGEYGYYV 338 Query: 545 TSDGSTMSYRTRVRTPSFAH-LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +DGS R VR PS+ H + + I +SD+ + S+ +V+R Sbjct: 339 VTDGSGYPRRINVRGPSYTHAVALLEHMIINQNISDVAGLMVSLHTYPPEVER 391 >UniRef50_Q3JMD7 Hydrogenase subunit n=33 Tax=Burkholderia RepID=Q3JMD7_BURP1 Length = 567 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 100/482 (20%), Positives = 169/482 (35%), Gaps = 22/482 (4%) Query: 116 NDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK--GHPLRKDYPARA 173 P + +F +A +R DL G+ G + R + W HPLR+ RA Sbjct: 105 EAGSYPDLSAIFASATRMQRALHDLVGLRARGAHDTRPWLAHGAWPRDYHPLRR----RA 160 Query: 174 TEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQL 233 T FE A + + +GP H + Sbjct: 161 TGGERFEYATADYPFV---------------PVAGDGVHEIAVGPIHAGVIEPGHFRFSV 205 Query: 234 DGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGI 293 GE+++ +GY HRG E++ ER + RI Y +A+E+ I Sbjct: 206 VGEKVLRLEERLGYAHRGVERLFERADALAGSRLAARIAGDSTVAFAWAYCMALEQALRI 265 Query: 294 TVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFR 353 VPDR +R +L E R+ +HL + D G + ++ + + I G R Sbjct: 266 RVPDRALRLRALLLERERVANHLGDLGALGNDAGFAVGLAHFSRLKEDWLRMQDRIFGHR 325 Query: 354 MHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAK 413 GGVA D+ + D + + + + + + L+ R G A+ Sbjct: 326 YLMDAIVPGGVARDIAADDAAAIVAQCDRIEREVRAMQTIYDDQSGLQDRFAGTGRLDAQ 385 Query: 414 EALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQS 473 +G G RA+G DVR + Y+ ++ D RV ++ E +S Sbjct: 386 AVAHFGVCGLAARASGQPRDVRADHRLAPYDALRIDVSR-DARGDVAARVAVRFAETYES 444 Query: 474 LRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMI 533 +R + L ++P+ A+ P R ++ P I Sbjct: 445 MRAIRALLADLPDDGLAAEIAPGATVPGARADAGGACEGEEGGDAAFCPGDARRRGIGWI 504 Query: 534 EATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSD 593 E +G L D R PS+ + + AI G++V+D + S + + Sbjct: 505 EGWRGPVFVALELDARGAVARCHCHDPSWHNWPALEHAIIGNIVADFPLINKSFNLNYAG 564 Query: 594 VD 595 D Sbjct: 565 HD 566 >UniRef50_C6HVM5 Putative hydrogenase-3 subunit (HycE) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM5_9BACT Length = 512 Score = 353 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 93/489 (19%), Positives = 178/489 (36%), Gaps = 48/489 (9%) Query: 107 IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLR 166 ++L ++L ++ + P+ + +FP A +ER DLFG+ DG +LR + W PL Sbjct: 71 VLLSLSLPKDAVSFPSLSSIFPPAARFERTIHDLFGLIPDGLADLRPWIDHGLWSHPPL- 129 Query: 167 KDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGA 226 +P LT+ Q ++ + + + +GP H Sbjct: 130 --------SHTPSPLTRLAQGMDYPFV-----------RVRGDGVHEIPVGPVHAGIIEP 170 Query: 227 FRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLA 286 + GE+++ +GY H+G ++ ++ RI + + A Sbjct: 171 GHFRFSVVGEKVLRLETRMGYTHKGIARLFRGRNLPEAARLASRISGDSAVATSLAFSKA 230 Query: 287 VEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLV 346 VE+ I + + V +R +L E RI +HL + D G + R+ ++ + Sbjct: 231 VEEALDIEISEGVRFVRAILLERERIANHLADLGALGNDAGLAVALSLFHPLREAMHRIN 290 Query: 347 EAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQG 406 ++ G R+ GGV+ L L + + ++ E+ + L+ R Q Sbjct: 291 LSLFGHRLLFDSVVPGGVSTGLSGAMIETLLLENERLQAEVSLLERIYADHGGLQDRFQN 350 Query: 407 VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLK 466 + A G G RA+G +D+R F + + + D +RV ++ Sbjct: 351 TGILSPEVAGRLGIGGVAGRASGQGWDLRVDHREDPVHRFAPALAL-DHIGDVASRVRIR 409 Query: 467 VEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPA 526 E+ +SLR+ L + P A P P Sbjct: 410 FFEIFESLRLTHALLTSFPGPDICATIPDPPAP--------------------------- 442 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 E ++E +G ++ + + S + A++ G+LV+D + S Sbjct: 443 REGAGIVEGFRGEVLGWVRILPGKILADAHIADGSPLLWHALEASVPGNLVADFPLINKS 502 Query: 587 IDFVMSDVD 595 + S D Sbjct: 503 FNPSYSASD 511 >UniRef50_Q8TY43 Ni,Fe-hydrogenase III large subunit n=1 Tax=Methanopyrus kandleri RepID=Q8TY43_METKA Length = 409 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 100/387 (25%), Positives = 173/387 (44%), Gaps = 34/387 (8%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + +GPNHP RI L + GEE+VDC ++GY HRG EK+ E W +R+ Sbjct: 27 HRVPVGPNHPILKEPLRIKLAVRGEEVVDCKVEMGYCHRGIEKIMEGMPWQKAAFLAERV 86 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + M ++ VEKLA R +RV++ EL RI SHL+ + + + T Sbjct: 87 CGICSHAHNMCFIGGVEKLAEGDPAPRGLFLRVLVQELDRIQSHLIANAAYFYSIEHETM 146 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + R+++ D +E ITG R+ W +GGV D+ + E LD + + +Y Sbjct: 147 FVWNMNTRERVLDCIEEITGNRILTGWNVVGGVRMDVTEDQLNNVLETLDAIRDDVITYR 206 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF-DVRKARPYSGYENFDFEI 450 + A + +K RS+GV ++ G RA+G+ D+R P Y F+ Sbjct: 207 RIAKNDPFIKLRSRGVGVITKDHIRKYRVVGPQARASGVPESDMRLQEP--VYPELGFK- 263 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 PV D R++++ +E QS+ ++E+ ++ +PEG + + Sbjct: 264 PVYRKEGDNLARILVRYDECLQSIELIERIVDELPEGRHRREL----------------- 306 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 + A +EA +G Y + + R +RTPS +++ + A Sbjct: 307 ------------EVNAGHVDNRVEAPRGELVYDMELAPGGVVKRVTIRTPSVPNIRVLEA 354 Query: 571 AIRGSL-VSDLIVYLGSIDFVMSDVDR 596 GS ++D + S+D ++ +R Sbjct: 355 IAPGSPSIADAVATYASLDPCVACNER 381 >UniRef50_Q57935 Uncharacterized protein MJ0515 n=17 Tax=Euryarchaeota RepID=Y515_METJA Length = 380 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 99/390 (25%), Positives = 172/390 (44%), Gaps = 32/390 (8%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E+ + +GP HP RI L LDGE+ VD ++GY HRG EK+ E + H I Sbjct: 3 ENMATIPIGPIHPVLKEPLRIKLVLDGEKPVDAEIEMGYVHRGIEKIMEGKHCHKGIHLA 62 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +R+ + V+ M + +E ++ I +PD+ +RV+ EL RI+SHL+ + + + Sbjct: 63 ERVCGICSYVHTMTFAECIEHISKIEIPDKAKYLRVVTCELERIHSHLIASAVYNLSIEH 122 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T + R+ I DL+E ITG R++ + IGGV D+ R + + LD L Sbjct: 123 ETLAMWLLNVREIIMDLMEMITGNRVNMGYNVIGGVRRDINREMMDEIYKKLDIFEDELK 182 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF-DVRKARPYSGYENFD 447 + + ++ RS+ + E + G R +G+ D R S Y+ Sbjct: 183 NIIEVFETGPLIALRSKEIGILPYHEVMRTRAVGPICRGSGLPESDWRLRH--STYQELK 240 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F+ PV D + R+M++ EE+ +S+R++ + L + E Sbjct: 241 FK-PVWREEGDNFARMMVRHEEIIESVRLIREALEHYEE--------------------- 278 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 + ++V E EA +G +Y + + R +RTP+ +L+ Sbjct: 279 ----CSGDIRVKAEIKGGKGEW--RNEAPRGEVTYRMEITDGGIIKRIMIRTPTVMNLEA 332 Query: 568 IPAAIRGS-LVSDLIVYLGSIDFVMSDVDR 596 ++ V+D + SID +S +R Sbjct: 333 YKYMLKTCPTVADAVSAYTSIDPCVSCTER 362 >UniRef50_Q21TB4 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TB4_RHOFD Length = 498 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 104/489 (21%), Positives = 170/489 (34%), Gaps = 58/489 (11%) Query: 107 IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLR 166 ++L+ + H T P A +ERE W+ G+ D HP L+ Sbjct: 67 VILRATAQRGE-HYRCLTAQHPAAQIFERELWEQTGLFPDDHPWLK-------------- 111 Query: 167 KDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGA 226 P +Q +E FK ++ + +GP H S Sbjct: 112 -----------PVRFEGERQQRMLEYPFFKVRG---------QEVHEVGVGPIHASVIEP 151 Query: 227 FRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLA 286 GE + +GY HRG E + R+ P + I Y A Sbjct: 152 GHFRFMCLGENVHHLEIQLGYQHRGVEGLLLRRPVWQLTPLVESICGDSAVAYAWGYGAA 211 Query: 287 VEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLV 346 +E ++ V + R + E+ RI HL + D+ + R I + Sbjct: 212 LELMSNQPVAPAIQASRAIALEMERIAMHLATLGGMATDIAFLQGGATYGRLRTAIINAS 271 Query: 347 EAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQG 406 + + G R W R G A L + L L + L ++ R G Sbjct: 272 QRVCGNRFGRGWIRPG-QAKPLSEALQQDLTRTLRAFAPDFTQINQLMLAARSVQARLHG 330 Query: 407 VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLK 466 + AL+ G TG RA+G+ D R P + Y + + V DC+ R+ L+ Sbjct: 331 TGTVSQQAALDLGLTGPVARASGVALDHRTQWPGAAYGHAPLPM-VTEPDGDCWARMRLR 389 Query: 467 VEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPA 526 + E+ SL L Q L + +A ++ P E L ++ + GPV+ Sbjct: 390 MREVDASLAWLLQLLGDTTLNLSQAGQAQSSTP----AALQAEALCVSLVEGTRGPVLQV 445 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 E+ + KG +Y +V+ PS A+ + A+R + +SD + S Sbjct: 446 LET-----SAKGELRHY------------KVQDPSTANWFGLAFAMRDNAISDFPICNKS 488 Query: 587 IDFVMSDVD 595 D D Sbjct: 489 FDLSYCGND 497 >UniRef50_UPI0001C42022 energy-converting hydrogenase B subunit N EhbN n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C42022 Length = 391 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 96/388 (24%), Positives = 177/388 (45%), Gaps = 35/388 (9%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + +G HP+A +R+ ++ E I D IG +HRG E++ E T++I Sbjct: 14 TEIQMGTVHPAALEPYRVRFFVEDEIIKDAEITIGVNHRGIERVMEGLPVEKANMLTEKI 73 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + V EK G+ VPDR IRV++ EL R++SHLLY+ + + T Sbjct: 74 CGICSNSHTWNSVRTAEKGLGVEVPDRAVYIRVIVGELERLHSHLLYLGHGCETLAHETF 133 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV--AHDLPRGWDRLLREFLDWMPKRLAS 389 F R+ I DL+ I G R+ IGGV +L + + + +D + K + Sbjct: 134 SMRVFYIRETIMDLLAMIGGNRVQYGCSIIGGVRPRCELDDNRIQRILDGMDLVEKNVLD 193 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 + ++++++ R G ++AL+ +G LRATG+ D+R Y Y+NFD++ Sbjct: 194 FANRFVKDSVVASRISGTGYIPQEQALKLAVSGPTLRATGVKRDLRTDM-YE-YDNFDYD 251 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 I + D +++++V E+ ++++I+ Q + ++PEG +R+ + I+ Sbjct: 252 I-ITQDTCDVQAQLLMRVFEIFEAIKIVRQAIRDLPEGKIT-----------DRSWEMID 299 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSY-YLTSDGSTMSYRTRVRTPSFAHLQQI 568 T + IE +G + Y DG +RTPS +++ + Sbjct: 300 TDLIE----------------SYIEVPRGTLYHSYAIEDG--RVRHCIIRTPSMSNIGAM 341 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 A + ++D + + D + DR Sbjct: 342 QYACIDNHITDGQLCIVQCDPCFTCSDR 369 >UniRef50_Q58433 Uncharacterized protein MJ1027 n=12 Tax=Methanococcales RepID=Y1027_METJA Length = 377 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 93/386 (24%), Positives = 167/386 (43%), Gaps = 28/386 (7%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 + +GP HP+ R+ L ++ E I + IG ++RG E + E +++I Sbjct: 9 EIAIGPVHPTMLEPHRLRLFIEDEIIKEAELVIGVNYRGIELIMEGLPPEKISILSEKIC 68 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 + ++ V E+ I VP+R IR ++ EL R++SH+L + +G T Sbjct: 69 GICSHIHVWCNVTVTERGCDIEVPERAEYIRAIVEELERLHSHMLLFGHAFEVLGFETMA 128 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV--AHDLPRGWDRLLREFLDWMPKRLASY 390 F AF R+ I ++ ITG R + IGG+ ++ L E L+ + L Sbjct: 129 FRAFMIREPIMQILGEITGGRAQYSCPIIGGIRPRCNIKESKIPALLERLEKFEENLKKL 188 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 + + + ++ R + V K A + G R +GI D+RK Y+NF+FE Sbjct: 189 LERTVNDPMIMSRIKDVGVLDKKTAKKLHALGPTARGSGIHSDMRKMGQVPVYDNFEFEE 248 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 V D ++R+ ++ E +S++I+ Q L ++P + +P Sbjct: 249 IVFDD-GDVFSRLAVRFYECFESVKIIRQGLKDLPNLDKRIYNP---------------- 291 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 ++ + P+ N EA +G Y D + + ++RTP+ +L + A Sbjct: 292 ---NYELKEFKPIDVYN------EAQRGQVYYSYGLDENGRVRQVKIRTPTATNLACMEA 342 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G VSD + + S D + DR Sbjct: 343 ILPGHHVSDAELIIASCDPCFTCTDR 368 >UniRef50_A0LSU1 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU1_ACIC1 Length = 499 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 103/486 (21%), Positives = 171/486 (35%), Gaps = 42/486 (8%) Query: 109 LKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKD 168 + VA+ P + + P A+WYER+ DLFG+ GHP L +++ PLR+ Sbjct: 54 IDVAVPRGSTSYPALSAVVPAASWYERKIHDLFGLEPLGHPRLDPLIL-------PLREA 106 Query: 169 YPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFR 228 P + P+E + + GP + + Sbjct: 107 QP------------RPLPGQRSAIPPLTPDEAAIPSRVLGHGVFTIPHGPVRSGVYESVE 154 Query: 229 IVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVE 288 +++ GE+I + HRG E+ E + +R+E + + + + AVE Sbjct: 155 YLVETPGEDIPYVGIRVFAKHRGIERRFEDLDVSDGVLLAERVEGIASVAHALAFCHAVE 214 Query: 289 KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEA 348 LAG+ R +RV+ +EL RI +HL G V +++I L+ A Sbjct: 215 DLAGVIPSPRDRSVRVIFAELERIANHLDVALKLADAAGLAVAVSRFGYHKERILRLIGA 274 Query: 349 ITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVA 408 G R GG+ + + LL D + + A +Q R +G Sbjct: 275 ACGSRFGRGVVVPGGIGCEPAISPNALLTRLDDILREVFAD-ADLLMQTPSFLDRLRGTG 333 Query: 409 AYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVE 468 A G G RA+G D D R RPY Y + V G D R+ ++ Sbjct: 334 PLDPALARRHGALGPIGRASGFDDDDRWHRPYDEYSDLPQFPAVSSGSGDALARLEIRWS 393 Query: 469 ELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 528 E+R S ++ Q + ++ P P +R + Sbjct: 394 EIRSSAELIRQAVAHIAALSAPTAEPADVPAAIDRI---------------------SGR 432 Query: 529 SFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSID 588 EA +G Y+ R R+ SF +L G +++D S Sbjct: 433 GIGWAEAPQGEV-VYVVECDDGRISRCAPRSASFHNLVLFHDVFAGDILTDFPFIEASFG 491 Query: 589 FVMSDV 594 ++ V Sbjct: 492 LSIAGV 497 >UniRef50_C6WGH3 NADH dehydrogenase (Quinone) n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WGH3_ACTMD Length = 358 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 113/386 (29%), Positives = 181/386 (46%), Gaps = 46/386 (11%) Query: 212 MFLNLGPNHPSAHGAFRIVLQL-DGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDR 270 ++LGP HPSAHGA+R+ L + D E I P +G+ HRGAEK+ E + + + +R Sbjct: 18 RVVDLGPLHPSAHGAYRLRLTVRDDEVITSAEPLVGHLHRGAEKLFEVRDYRQVLTLANR 77 Query: 271 IEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 ++L NE+ LAVE++ G+ VP R +R +L EL R+ +HL++++ V A Sbjct: 78 HDWLAAFCNELAVALAVERMTGMDVPPRAQWLRALLCELNRVMAHLVFLAPLTDPVAAA- 136 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 R+ + ++E +G R+H RIGG+ D+P GW + LD + Sbjct: 137 ------RGREAVQAVLEEASGGRIHFMANRIGGLREDVPAGWAERVAGALDAVE------ 184 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 + G+ +AL G TG RA+G+D D+R+ P Y D Sbjct: 185 ------VPEVPTGLAGLGVLSRADALARGVTGPIGRASGVDLDLRRDDPLPAYRELDVR- 237 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 P D + RV V++L Q++ + +CL +P GP P Sbjct: 238 PSVRDGGDAHARVACMVDDLAQAVALARECLRRLPGGPVNLRLPKAVKA----------- 286 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 P + +EA G++ +L S G +R ++RTPSF ++Q + A Sbjct: 287 --------------PEGSVYTRVEAPLGVSGVHLASRGEKTPWRLKLRTPSFNNVQALSA 332 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G+ V+ L + LGS V+ D+DR Sbjct: 333 LLPGTPVAQLPLVLGSFAVVVGDIDR 358 >UniRef50_A3CUR5 NADH dehydrogenase (Ubiquinone) n=3 Tax=Methanomicrobiales RepID=A3CUR5_METMJ Length = 362 Score = 337 bits (864), Expect = 9e-91, Method: Composition-based stats. Identities = 90/388 (23%), Positives = 174/388 (44%), Gaps = 35/388 (9%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + + LGP HP R+ + GE ++ ++GY +G E++ + W + +R+ Sbjct: 7 VSIPLGPMHPCWKEPVRLKCETAGERVLKTELELGYMKKGIERIMRGRPWQEVMFLAERV 66 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + V+ M ++ +E+++ I VP R +RV+++EL R+ SH+L ++ + T Sbjct: 67 CGICSVVHNMVFIETMEEISDIPVPPRAAYLRVVVNELDRMASHILANFSYCYTIEHETL 126 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + R+ + D +E ITG R++ A+ GGV DL L L + + + Y Sbjct: 127 AMYLLNIRETVLDNLERITGSRINTAYMIPGGVRFDLLPEDAAALLADLAKVEEEMKRYV 186 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI-DFDVRKARPYSGYENFDFEI 450 + ++ RS+G+ +EA+ T G RA+G+ D D+R P Y F Sbjct: 187 RIFETGPLIALRSKGIGYMSREEAIRAHTVGPTARASGVEDSDLRLRHPT--YRELGFT- 243 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 + D + RVM++ +E+ QS+ ++ +C+ +PEGP + Sbjct: 244 QITRTEGDNFARVMVRFQEVFQSIDLIRKCVETLPEGPIRG------------------- 284 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 G + A E+ EA +G +Y + +D +RTPS +++ Sbjct: 285 ----------GGLCKAGEASYAGEAPRGELTYTIKTDEYGRVVDIAIRTPSIMNIEACAH 334 Query: 571 AIR--GSLVSDLIVYLGSIDFVMSDVDR 596 ++ + ++D+ S D ++ +R Sbjct: 335 SMIVDAASIADVTSTFISSDPCIACNER 362 >UniRef50_A9FF67 NAD-dependent dehydrogenase subunit n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FF67_SORC5 Length = 495 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 100/519 (19%), Positives = 174/519 (33%), Gaps = 63/519 (12%) Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D R+ T +V L + DR+ + + ++ + T + +ERE Sbjct: 39 DMRVVTLYGRRDVDRVAVTAVLQASDRSLHVS-RTEVSAERGYHE-MTTEHAALHCFERE 96 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 + G GHP L+ I + E A++ Sbjct: 97 LHEQTGARIAGHPWLKPI-----------------------------RYEGQEQSAMSSH 127 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 E ++ + +GP H GE++ +GY HRG E+ Sbjct: 128 -----PFYKIEGKEVHEVAVGPIHAGVIEPGSFRFMCLGEQVHHLEIHLGYQHRGVERRL 182 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 + S P + I + + A+E LAG + + + R + EL R+ HL Sbjct: 183 LERDPRSLTPLIETIAGDTSVAHAWAHCSALESLAGCRLDIEIELARAVALELERVAMHL 242 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 ++ DVG + R + + + G R R GGV LP + Sbjct: 243 STLAGMAADVGFLQGATTYGRLRTTAINTMMRLCGSRFGKGALRPGGVRMRLPPEALPDI 302 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 R LD + L L ++ R + +A E G G RA+GI+ D R Sbjct: 303 RANLDLLQADLPIINDCFLMARTVQHRLRSTGTLTTAQARELGLVGLAARASGIELDARH 362 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 + Y + PV DC+ R +++ E+ SL + + A+ Sbjct: 363 LVEHGAYSVVPIQ-PVVLPDGDCWARARIRIAEIEASLSWVSAVIA------LYANWERP 415 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 P S G + P + ++E +G + + + + Sbjct: 416 RP--------------------SIGELAPDQLAISLVEGFRGEVVHCVETGAHGEVVHYK 455 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 V+ PS + + A+RG+ +SD + S D D Sbjct: 456 VQDPSLRNWMGLALAVRGNEISDFPICNKSFDLSYCGND 494 >UniRef50_Q5DUX5 NADH-ubiquinone oxidoreductase 49 kDa subunit n=3 Tax=Nyctotherus ovalis RepID=NDUS2_NYCOV Length = 412 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 114/391 (29%), Positives = 188/391 (48%), Gaps = 7/391 (1%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 + LN GP HP++HG R+V+ + GE + P IG+ HRG E++ E S+ + + D Sbjct: 25 RILILNFGPQHPASHGVLRLVIVIIGEVVTKLDPHIGFLHRGTERLVEEHSYMNAAVFMD 84 Query: 270 RIEYLGGCVNEMPYVLAVEK-LAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 R++Y Y LAVE+ LA + R ++R + EL RI +HLL I+T D+G Sbjct: 85 RLDYTTVLTQTHAYCLAVEQALAKSRLCIRTQLLRTIFDELSRILNHLLSIATHALDIGT 144 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIG-GVAHDLPRGWDRLLREFLDWMPKRL 387 M +F+AF DR++I +L E I+G RMH A + + H L + F K Sbjct: 145 MAMLFWAFEDRERIMELYEYISGARMHTALYYPNQTLDHILTNELLAKILIFSRNSEKTY 204 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR--KARPYSGYEN 445 A N + + R G+ + + +G R+TG+ D+R + Y Y + Sbjct: 205 TEIYIALYNNRVWRLRLCGIGVVSTEISTSTTISGPVARSTGLQLDMRSGENYQYGYYAS 264 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 I +G D + R ++++ EL +S R++ L + + + + + Sbjct: 265 LTLRIFLG-ISGDSFDRFIIRLRELFESTRLIYNSLIELSAYINISVYNMCSYSNNPHLK 323 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 IE+LI F ++ + +E+ KGI L ++ + YR +R+P++ HL Sbjct: 324 --IESLIELFRYSLGEYLLNISLVSGFVESGKGIFGIMLAANNTNRPYRLYIRSPAYMHL 381 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Q +P G ++DL LGSID V +VDR Sbjct: 382 QLLPKLGAGHHIADLATLLGSIDVVFGEVDR 412 >UniRef50_Q2NED9 EhbN n=5 Tax=Methanobacteriaceae RepID=Q2NED9_METST Length = 383 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 89/388 (22%), Positives = 170/388 (43%), Gaps = 35/388 (9%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 +N+G HP+A +R+ L ++ E + D +G +HRG E++ E T+++ Sbjct: 21 TEINMGTVHPAALEPYRVRLFVEDEIVKDAEITVGLNHRGIERIMEGLPVEKANALTEKV 80 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + E GI +P+R +RV+ EL R++SH+LY+ + + T Sbjct: 81 CGICSNGHIYNSCRVGEGALGIEIPERAVYLRVLAEELERLHSHMLYLGHGSEVLCHETF 140 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV--AHDLPRGWDRLLREFLDWMPKRLAS 389 F R+ + DL+ + G R+ +GGV DL + + + +D++ +++A Sbjct: 141 AMRIFYIRESVMDLLYMMGGNRVQYGISVLGGVRPRADLNLKEQQRVLDTMDYIDEKVAD 200 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 + + + + ++ R G K+AL+ TG LRATG ++D R YE F+F+ Sbjct: 201 FAERFIADPMVMHRITGTGELSQKQALDLHVTGPSLRATGYEYDFRTEM--FEYEPFEFD 258 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 I + D ++++ E+ +S +I+ Q + N+P+GP P + Sbjct: 259 I-ITQDGGDVRANILMRATEIFESTKIIRQVIKNLPKGPIVTRDWDLVDSPVYK------ 311 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSY-YLTSDGSTMSYRTRVRTPSFAHLQQI 568 IE +G+ + Y DG + +RTPS +++ + Sbjct: 312 ---------------------SYIEVPRGVCYHSYGLEDG--KVRHSIIRTPSMSNIGAM 348 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G + D + + S D + DR Sbjct: 349 QESCIGHPIQDAQLAIVSCDPCFTCTDR 376 >UniRef50_Q5P2H0 Subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenases n=15 Tax=Proteobacteria RepID=Q5P2H0_AZOSE Length = 551 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 96/485 (19%), Positives = 157/485 (32%), Gaps = 50/485 (10%) Query: 113 LAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK--GHPLRKDYP 170 L P ++ F A +R DL GI + + R + W PLR Sbjct: 114 LDVVRPAYPDISRFFVPAVRMQRAAHDLVGIDAEDSGDSRPWLRHGAWPADYFPLR---- 169 Query: 171 ARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIV 230 + + + + F E + + +GP H Sbjct: 170 -------IENTGQERFAPQPDNYPFV--------FVEGDGVHEIAVGPVHAGTIEPGHFR 214 Query: 231 LQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKL 290 + GE+++ GY H+G E+ R+ Y +A E Sbjct: 215 FSVVGEKVLRLEERFGYTHKGIERRFMGMDIDEGARLAGRVSGDSTVAYAWAYAMAAESA 274 Query: 291 AGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAIT 350 AG+ VP+R +R +L E R+ +HL + D + R+ Sbjct: 275 AGVAVPERAAWLRALLLERERVANHLGDLGALGNDAAFGFALAQFSRLREDWLRANFEAF 334 Query: 351 GFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAY 410 G R+ R GGVA DL LR + +A + ++ L+ R Sbjct: 335 GHRLLMDCIRPGGVARDLDAAAAAQLRRDAVALVAEVAELKDIYDEHAGLQDRFVTTGRV 394 Query: 411 GAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEEL 470 + A G TG RA+G D+R P+ Y+ D RV ++ +E Sbjct: 395 APELAARLGLTGLAGRASGQVADLRVDFPWPPYDKLAVT-ASTQFNGDVAARVAVRFDEC 453 Query: 471 RQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESF 530 +SLR+++ L +P+GP A + A Sbjct: 454 FESLRLIDALLAALPDGPLDAPVAIRD----------------------------AASGA 485 Query: 531 QMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFV 590 IE +G L +D R PS+ + I A ++V+D + S + Sbjct: 486 GWIEGWRGEIFVALETDARGRIARCHCHDPSWQNWPVIEHASIDNIVADFPLINKSFNLG 545 Query: 591 MSDVD 595 S D Sbjct: 546 YSAQD 550 >UniRef50_A5FW46 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW46_ACICJ Length = 476 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 95/487 (19%), Positives = 169/487 (34%), Gaps = 66/487 (13%) Query: 111 VALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 V VP+ ++P WYERET D GI F G P ++ PLR D Sbjct: 55 VWSVPAGGTVPSIATIWPLLGWYERETADHRGIAFSGQPEPFSLIA-------PLRAD-- 105 Query: 171 ARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIV 230 + + G + L GP + Sbjct: 106 -------------------------EEADLRRLPGLSGDAVQVLPFGPVRAGVVESAEFS 140 Query: 231 LQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKL 290 GE I+ VP + HRG E Q+ + + +R+ +G + + Y A+E Sbjct: 141 FFYVGEAILHYVPHLFLKHRGMEDRFVDQTPETGLVLAERVSGVGSVAHALAYAQAMEAA 200 Query: 291 AGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAIT 350 A + VP R RV+++EL R+ +HL Y+ +++ + +T Sbjct: 201 AQVAVPGRARYQRVIVAELERLYNHLHYLGHLADTTTLKVAHAEGALLAERVKQIGARVT 260 Query: 351 GFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAY 410 G R GG+ +L L LD + + Y + R Sbjct: 261 GSRFLRGVIAPGGLRREL---RVEGLAGALDALRAPIRRYIARLDASESHFDRLATTGVL 317 Query: 411 GAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGG-VSDCYTRVMLKVEE 469 + A + G TG RA+G+D D+R+ Y+ Y++ D + V G D + R +++ E Sbjct: 318 PREVAFDQGATGPVARASGLDRDLRRDHAYAAYDDPDLALAVATGTDGDAHARARVRIAE 377 Query: 470 LRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANES 529 + +L ++ + + P G + Sbjct: 378 IENALLMIVRAIALTPGGAIRVACAPAAGAEAM--------------------------- 410 Query: 530 FQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDF 589 E+ +G Y + R ++++PSF++ + P + G+ + D + S Sbjct: 411 -GWAESPRGTLIYAVHVGPDGRLARVKIKSPSFSNWRVFPYTVHGTNMMDYAINEASFGL 469 Query: 590 VMSDVDR 596 ++ R Sbjct: 470 TIAGCAR 476 >UniRef50_A6Q6W4 Ni-Fe hydrogenase, large subunit HycE n=3 Tax=Epsilonproteobacteria RepID=A6Q6W4_SULNB Length = 455 Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats. Identities = 93/486 (19%), Positives = 178/486 (36%), Gaps = 62/486 (12%) Query: 112 ALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDY 169 +++ + + T K P+A W+ER+ D FGI + + R ++ + + HP++K + Sbjct: 29 TISKENPVIRTLAKKHPSAIWFERKMSDDFGIVIEDAFDKRPLLHQERFPKAIHPMQKAF 88 Query: 170 PARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRI 229 +F+ F K + + +++GP H Sbjct: 89 QKNTLDFAEFTPYK-------------------YEAIQGDGVFQVSVGPIHAGIIEPGHF 129 Query: 230 VLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEK 289 GE+++ Y +RG EKM E ++ P +RI + + V + Sbjct: 130 HFSQAGEDMLHQEVRHFYKYRGIEKMLEGKTLLEAKPVIERISGNESIAYQTAWRDIVCQ 189 Query: 290 LAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAI 349 AG+ +P + L E+ RI HL + D G + FA + ++ + Sbjct: 190 AAGMELPLSLRKRHAFLLEMERIIHHLTDLGFIPNDAGFGAALAFASKLSEDARRQLQNV 249 Query: 350 TGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAA 409 TG R D+ L ++LD + K +A +E + L R Sbjct: 250 TGHRFGFDAIGFENKVLDISS-----LYDYLDGLQKDIAFFETWIMDIPSLWDRFDTTGI 304 Query: 410 YGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEE 469 + L++ T G RA+G D R++ P+ Y FEI D R ++++E Sbjct: 305 LQKADVLKYDTVGVVARASGFSLD-RRSEPF--YLEHGFEIQT-EQSGDVAARFKVRLQE 360 Query: 470 LRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANES 529 ++ S+ +++ L ++ T IE + + Sbjct: 361 VKNSIVMMKHFLE------------------EDDTHIDIE-------------KIKDGDY 389 Query: 530 FQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDF 589 E++ G + + R VR PSF + Q + + ++++D + S D Sbjct: 390 TAFAESSLGELFMNIEI-KDGVIERFFVRDPSFMNWQTLHLMMPNNIIADFPLINKSCDL 448 Query: 590 VMSDVD 595 + D Sbjct: 449 SYAGND 454 >UniRef50_A6UVJ6 Hydrogenase, component E-formate hydrogenlyase subunit 5-like protein n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVJ6_META3 Length = 518 Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats. Identities = 97/503 (19%), Positives = 165/503 (32%), Gaps = 51/503 (10%) Query: 98 LISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMP 157 + S+ RN D L V + ++ +ERE + +GI HP L+ + Sbjct: 61 IYSVLRN-DTELYVLSTMVGTSFESLSQYNIKFQMFEREIAEQYGIVPKNHPWLKSVRYH 119 Query: 158 QTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLG 217 + +KG P D+ T E+ + +G Sbjct: 120 KNYKGAP----------------------DVFGNNYTAPIPGNYPFYEVGGEEIHQVAVG 157 Query: 218 PNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGC 277 P H GE I+ GY HRG EK + I Sbjct: 158 PVHAGIIEPGHFRFNCIGETILSLEIQHGYQHRGIEKQILNCKKEVLPLIIESIAGDTVI 217 Query: 278 VNEMPYVLAVEKLAGI--TVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 N + + A+E L+ + + R +L E+ RI +H+ + DVG + + Sbjct: 218 GNSICFSEAIEWLSNCNYEANEPLYNYRRLLLEIERIANHIGTMGGLAGDVGYIPTASYY 277 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 R ++ I G R + R G L + L + + + K + L Sbjct: 278 GRIRGDFLNMFVLICGNRFGRSSVRPFGAPFKLSDDHIKELIKRFEQLKKEVIDVGNLML 337 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS--GYEN-FDFEIPV 452 N + GR K A G G RA+GI +DVRK+ + Y V Sbjct: 338 DNPEVLGRFDYTGIVDTKTAKLIGLVGPAGRASGIKYDVRKSFSKAKNIYNRGIGL---V 394 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 +R E S +E C+ + F+ + E+T+ Sbjct: 395 ARKDGAVSSRAKTYFYETLDS---IEFCIELLKVADFQINDSADKLEKIEKTV------- 444 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 + P + M EA +G S+ + +D + R +++ PSF + + + Sbjct: 445 ----------LKPNSFIITMEEAWRGELSHCIITDENGNIIRYKIKDPSFHNWTALELVV 494 Query: 573 RGSLVSDLIVYLGSIDFVMSDVD 595 R + D + S + D Sbjct: 495 RNEGIYDFPLCNKSFNLSYCGFD 517 >UniRef50_B0SCU7 Metal (Ni/Fe) hydrogenase, large subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU7_LEPBA Length = 475 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 83/459 (18%), Positives = 161/459 (35%), Gaps = 39/459 (8%) Query: 154 IMMPQTWKGHPLRKDY--PARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTEN--- 208 ++ + +R + ++S + D + L+ + ++ + Sbjct: 38 FLLDSNYPIWLIRHSFGQDMGPEDYSEIKEDDFLTDQRGKNLSLHQKTGIIRDLFYHGLK 97 Query: 209 ----EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + +GP H +DGE I +G+ RG ++ + Sbjct: 98 VPFSDGEYSHAVGPIHAGIIEPGHFRFIVDGEVIRHLTIRLGFQKRGIRDHLLHKAMNQV 157 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 +PY++ I + + E L I V + + R +L EL RI H+ + + Sbjct: 158 MPYSEMISGDTSVGYALAFSKIYEDLYEIPVSKEIRLFRSILLELERIAVHIGDLGGISE 217 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV-------AHDLPRGWDRLLR 377 D+G T+R L+EA TG R + R G + A + +L Sbjct: 218 DIGYYPLYGVCVTERGAALGLMEAWTGHRFGKSVVRPGRLYLNNRLNAKQAKESFKQLKN 277 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 ++ + ++ AL + LK R QG + +G G R G++ D+R Sbjct: 278 AYIKKIRPQI----LRALSISTLKERMQGCGFISEMDVQNFGFVGMVARMAGVNEDLRIE 333 Query: 438 -RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 Y + + D + R+ ++ E+ QS+ +E+ + + + L Sbjct: 334 NFDYPNWNPLPLKEEHHHYNGDVWARMYIRYSEIEQSMDWIEKTMEEI-------NWDLL 386 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 P + Q I T T + +EA +G L D + + + Sbjct: 387 WEPKVKVPNQEILTKRTK-----------PGFYYSAVEAWRGPLLVALQFDENGLVNNSY 435 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +R PS + + A+RG V+D + S + D Sbjct: 436 IRDPSVLNWHALELAVRGEQVADFPLNNKSFNLSYVGFD 474 >UniRef50_D1Y9R2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=3 Tax=Propionibacterium acnes RepID=D1Y9R2_PROAC Length = 382 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 104/392 (26%), Positives = 171/392 (43%), Gaps = 39/392 (9%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 + +L+LG HPS G I +D + I ++G HRG EK+ E + + Sbjct: 25 EVTWLDLGHLHPSRPGLVTITTTVDDDVITSSQVNVGNLHRGDEKLFEARGYRQIPMLAS 84 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH---LLYISTFIQDV 326 R ++ + E A+E GIT+P RV IR +L+E RI SH L ++ D Sbjct: 85 RHDWTAPFIGETGAAHAIEDAMGITIPTRVAWIRTLLAEFSRITSHFTFLSWVGHHCDDA 144 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 G + A + + + +G R+HP RIGG+ W L E+LD Sbjct: 145 GLENAIATAI---ENARRIWQRCSGNRIHPMITRIGGLRIHPESEWQPTLGEWLDDANAL 201 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + ++ + AL T+ +GVA +G +G RA+G+D D R+ + Y+ Sbjct: 202 V-TWLRTALDATV---GVRGVAVIPTNMIDRYGLSGPVSRASGVDLDTRRR--TAVYDEL 255 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP--EGPFKADHPLTTPPPKERT 504 + V D Y+R+ + S + Q L+ +P +GP + P T P+ Sbjct: 256 KWPEVVIEPRGDAYSRLATLCNDAAVSSSLCRQILDRLPNLDGPLETRLPTTIKAPR--- 312 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 ++ IEA G Y L S GST +R +RTP+FA+ Sbjct: 313 ----------------------GRTWTTIEAPWGRAGYLLESRGSTTPWRMALRTPTFAN 350 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +Q + A + G+ V D+ + S+ + + D+D+ Sbjct: 351 VQVLEAVLPGTRVDDVEATIASLGWTLGDLDK 382 >UniRef50_UPI000186E11F NADH-ubiquinone oxidoreductase 49 kDa subunit, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E11F Length = 369 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 99/271 (36%), Positives = 147/271 (54%), Gaps = 5/271 (1%) Query: 154 IMMPQTWKGHPLRKDYPARAT-EFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFM 212 ++ + W GH K +P R E + + ++ + + + TE ++ + Sbjct: 32 LITSKRW-GH--NKWFPDRRYFEEYRKDHPIPQPLIDRDTVEKYNPFLDDEPNTEIQNVV 88 Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 LN GP HP+AHG R++L+L GE + C P IG HRG EK+ E +++ +PY DR++ Sbjct: 89 -LNFGPQHPAAHGVLRLILELRGERVAKCDPHIGLLHRGTEKLIEYKTYTQALPYFDRLD 147 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y+ NE Y LAVEKL I VP R IR M +EL RI +HL+ I T I DVGA+TP Sbjct: 148 YVSMMCNEQCYSLAVEKLLNIEVPLRAKYIRTMFAELTRILNHLMGIGTHILDVGALTPF 207 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 F+ F +R+K+ + E ++G RMH A+ R GGV+ DLP G + +FL L + Sbjct: 208 FWFFEEREKLMEFYERVSGARMHAAYIRPGGVSQDLPLGLMDDIHQFLTKFGSILDDVDD 267 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGA 423 N I R+Q + A++AL +G T Sbjct: 268 VLTNNRIWVDRTQNIGVISAEDALNYGYTVP 298 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 51/87 (58%) Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 +I+ +++G +P ++ IEA KG YL SDGS+ YR +++ P FAHL + Sbjct: 283 GVISAEDALNYGYTVPPGATYTAIEAPKGEFGVYLVSDGSSKPYRCKIKAPGFAHLAALD 342 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +G ++D++ +G++D V +VDR Sbjct: 343 KIGKGLFLADIVAIIGTLDIVFGEVDR 369 >UniRef50_P21301 NADH-ubiquinone oxidoreductase 49 kDa subunit homolog n=3 Tax=Trypanosomatidae RepID=NDUS2_TRYBB Length = 386 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 108/385 (28%), Positives = 173/385 (44%), Gaps = 9/385 (2%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 GP HP+AHG +L GE IV IGY HRG EK+ E +S +PY DR+ Sbjct: 11 YRFTFGPQHPAAHGVLCCLLYFCGEFIVYIDCIIGYLHRGTEKLCEYKSVEQCLPYFDRL 70 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ C NE L E + + R +R+++ E R + LL IS + D+G ++P Sbjct: 71 DYVSVCCNEHLLSLCFEYMLRCCLSLRCAFMRLLIVEFTRSFNGLLCISCMVLDLGCLSP 130 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + ++F +R K+ + G RMH A+ + G+ D G+ L + + Y+ Sbjct: 131 LLWSFEERDKLMTFFDLCCGCRMHLAFMVLLGILDDFVFGFVDFLLLLIISCLFVMDCYD 190 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + N + R +G++ + + + +G R+ G+ +D R Y Y F ++ Sbjct: 191 LLFVGNRLFYLRLRGLSFFDLYDLVFNSLSGVLSRSLGMVWDCRLFSCYELYFMFCYDYC 250 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 + D + R+ L++ ++R SL I +QC IET+ Sbjct: 251 -FCFIGDAFDRLFLRLFDMRMSLLICKQCFFV-----GFFVFGFVCLFDYLYCDITIETI 304 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 I F + W +P SF +E KG L S R R+R F H+ + Sbjct: 305 IMLFYSL-WCCCLP-GISFACVEHPKGEYCLLLCFCVGLCS-RLRLRCADFLHICLLDVC 361 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 +RG L+ DL+ LG+ID V VDR Sbjct: 362 LRGFLLHDLVAVLGNIDVVFGSVDR 386 >UniRef50_Q0BPG8 Formate hydrogenlyase subunit 5 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPG8_GRABC Length = 517 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 105/494 (21%), Positives = 176/494 (35%), Gaps = 48/494 (9%) Query: 108 MLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRK 167 +L VA P + P A W ER DL+G + + R + W Sbjct: 65 ILPVATPIEGGRFPALSPFRPAAAWQERAIRDLWGYEAEHGVDSRPWLDHGRW------- 117 Query: 168 DYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAF 227 P A + +T + + ++GP HP Sbjct: 118 --PISAPLSPRPGPPLPPPEQAEWRMTSPFASSFVSSRPDIA-LHERSIGPVHPLMREPA 174 Query: 228 RIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAV 287 ++ L L G I +GY HRG + + + I RI + + + A Sbjct: 175 QLRLHLHGTLIRQAEWRLGYTHRGIQWLMRGKPLRDAIRIAARITGDAALAHGLAFARAA 234 Query: 288 EKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVE 347 E + P R ++R +++EL R HL ++ GA T R+++ ++ Sbjct: 235 EAALRLEPPPRALLLRGLMNELERCAVHLHVLAATASAAGADTYAAKLSAWRERLLRAIQ 294 Query: 348 AITGFRMHPAWFRIGGVAHDLPRG--WDRLLREFLDWMPKRLASYEKAA-LQNTILKGRS 404 G RM GGV DL G + +L+ MP+ + YE AA L L Sbjct: 295 EAFGNRMMIDLLIPGGVLTDLLDGTALETVLQALARTMPELIEGYETAASLSGHGLCACL 354 Query: 405 QGVAAYGAKEALEWGTTGAGLRATGIDFDVR---KARPYSGYENFDFEIPVGGGVSDCYT 461 +G A +A+ G RA+G D+R + P+ E D Sbjct: 355 RGCAVLSGSDAVSLAVPGPAGRASGRPHDLRTTWQQAPHGTVHRLVLE------NGDADA 408 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWG 521 R+ +++ E+++SLR+ L ++P GP P+ G Sbjct: 409 RMRVRLAEIQESLRLALLFLESLPVGPIANPMPI-------------------------G 443 Query: 522 PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLI 581 + E + +E+ +G ++L +G M PS+ + I AA+ G+ + L Sbjct: 444 TGNASGEGYGGVESARGACWHWLRIEG-GMVVSAHAADPSWRLIPAIEAALPGTDIDRLG 502 Query: 582 VYLGSIDFVMSDVD 595 V L S + D Sbjct: 503 VALASFALSPAGAD 516 >UniRef50_D1HPS0 Whole genome shotgun sequence of line PN40024, scaffold_116.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HPS0_VITVI Length = 441 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 146/301 (48%), Gaps = 48/301 (15%) Query: 284 VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIY 343 A E+L I VP R + IRV++ EL RI SHLL++ F+ D+G TP F+ F +R+ +Y Sbjct: 8 ANAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGVQTPFFYIFRERELVY 67 Query: 344 DLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGR 403 DL EA TG RM +FRIGGV DLP GW +F D+ +A Y+K ++N I R Sbjct: 68 DLFEATTGMRMMHNYFRIGGVVVDLPHGWIDKCLDFCDYFLTGVAEYQKLIMRNPIFLER 127 Query: 404 SQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRV 463 +GV G +EA+ WG +G L+A+GI +D+ K Y Y+ FD+E+ D +R Sbjct: 128 VEGVGIIGVEEAINWGLSGPMLQASGIQWDLLKVDHYECYDEFDWEVQ-WQKEGDSLSRY 186 Query: 464 MLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPV 523 ++++ E+ ++I++Q L +P GP++ ++ L E Sbjct: 187 LVRIGEMMAFIKIIQQALKGIPGGPYENLEIRCFDRARDLELNDFE-------------- 232 Query: 524 MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVY 583 YR SF +LQ +P ++ ++D++ Sbjct: 233 -----------------------------YRFI----SFINLQILPQLVKRMKLADIMTI 259 Query: 584 L 584 L Sbjct: 260 L 260 >UniRef50_A9B5Q0 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5Q0_HERA2 Length = 368 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 81/385 (21%), Positives = 145/385 (37%), Gaps = 31/385 (8%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L LGP HP R+VL+++GE+I D GY +RG + R + + I Sbjct: 13 YVLPLGPFHPDWQTPMRMVLRVEGEQIADVEFRDGYTNRGISERLTRTTIPQGLHLVSHI 72 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + + LA+E+L I +R +R++ E+ R HL + + +G Sbjct: 73 CAADSHAHSLGFCLALEQLLKINASERAAALRLLACEVERATVHLSTMKEVLTILGLQRD 132 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 ++++++ + G P + GGV DL + + + + + Sbjct: 133 AEHVQKLHHGLFEVMQHLCGTSSPPNYIVPGGVRQDLSSTEQESMALQFRRLERLMYRFV 192 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + + + R GV + A ++G G RA GI FD R R Y Y F Sbjct: 193 DRFIDHRGVLRRCVGVGVLSREAAEQFGVRGPMARAAGIGFDARIDRAYGAYAQFPPSR- 251 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 V D Y R+++ E +SL++ + L N+P G + + P + Sbjct: 252 VTQERGDVYARLVIFSLEAFESLKLAIRVLANLPSGDWAGNAPDS--------------- 296 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP-SFAHLQQIPA 570 +P IE+ +G Y + S+G R+ P F L Sbjct: 297 ------------VPQGSVTSNIESARGTLRYTVQSNG-VKLTSVRIDAPRQFDRLIA-RT 342 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVD 595 + G + D + + S + + Sbjct: 343 ILAGMNIDDAPLIIASASACTACSE 367 >UniRef50_Q056K8 Metal (Ni/Fe) hydrogenase, large subunit n=4 Tax=Leptospira RepID=Q056K8_LEPBL Length = 469 Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 78/436 (17%), Positives = 142/436 (32%), Gaps = 33/436 (7%) Query: 170 PARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTE-------NEDFMFLNLGPNHPS 222 ++S ++ + L + G+K +GP H Sbjct: 56 DQGEEDYSSYDFERYITADRKTDLEKFVTKKGIKDLVYKGLKVPIPASHYSHAVGPIHAG 115 Query: 223 AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMP 282 + GEEI + +G+ RG + + + PY + I + Sbjct: 116 VIEPGHFRFIVKGEEIRNLDIRLGFQKRGLIDLIKGKGSKDSFPYAEAISGDSTIAYAIA 175 Query: 283 YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKI 342 + E+ I VP ++ R++L EL RI +H+ + DVG R Sbjct: 176 FSRIFEEAQKIAVPQELDFARLVLLELERIATHIGDMGAIAGDVGYYPLQGVCSLQRGVP 235 Query: 343 YDLVEAITGFRMHPAWFRIGG--VAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTIL 400 ++EA+TG R G + L R L E + + + ++ + A + Sbjct: 236 LGVMEALTGNRFGRGALSPGKIVLRKGLNREKLNELAERIRSVTADVVAHFERAANVSTN 295 Query: 401 KGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK-ARPYSGYENFDFEIPVGGGVSDC 459 + R Q K+ G G + TG+ D+R + Y E+ D Sbjct: 296 RERLQSCGIIRQKQVRHLGFIGMVEKCTGLSRDLRSLEKSYMFSSPISLELNRDHMKGDA 355 Query: 460 YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVS 519 + R L+ EEL+ S + L ++ +P+ P K + Sbjct: 356 WARFYLRCEELKNSGKWL---IDAIPKLEAAFSLKFGKVPSKSSVKK------------- 399 Query: 520 WGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSD 579 + +E +G L D + +R S + + A+RG + D Sbjct: 400 -------GTYYSAVEGWRGPVLVSLDLDATGSIENAYIREVSVPNWHALELAVRGEYIGD 452 Query: 580 LIVYLGSIDFVMSDVD 595 + S + VD Sbjct: 453 FPLNNKSFNLSYVGVD 468 >UniRef50_C4PZT7 NADH-ubiquinone oxidoreductase fe-s protein 2 (Ndufs2), putative n=1 Tax=Schistosoma mansoni RepID=C4PZT7_SCHMA Length = 538 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 120/223 (53%), Gaps = 2/223 (0%) Query: 364 VAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGA 423 + D G E L K N I R++ V A++AL+ G +G Sbjct: 104 IRLDPHIGLLHRGTEKLIEY-KTYTQISDLLFDNPIWITRTKDVGIVSAEDALDLGFSGV 162 Query: 424 GLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNN 483 LR +GI +D+RK +PY YE+ DF++PVG DCY R ++++EE+RQSLRI+EQCLN Sbjct: 163 MLRGSGIKWDLRKTQPYDAYEDMDFDVPVGVH-GDCYDRFIVRMEEMRQSLRIMEQCLNK 221 Query: 484 MPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYY 543 MP+G K D PP + +E LI HF S G ++P ++ +EA KG Y Sbjct: 222 MPKGEIKVDDAKICPPKRAEMKSSMEALIHHFKLFSEGYLVPPGSTYTAVEAPKGEFGVY 281 Query: 544 LTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 L SDG+ YR +++ P FAH+ I RG ++ D++ + S Sbjct: 282 LVSDGTNKPYRCKIKAPGFAHMAAIDKLCRGFMLPDVVAVIVS 324 Score = 78.8 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Query: 176 FSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDG 235 + + + T +P ++ E + LN GP HP+AHG R++++LDG Sbjct: 42 MDELKESLYNPAVVKANTTVQPIDFFNVSHQEVQSVH-LNFGPQHPAAHGVLRLIMELDG 100 Query: 236 EEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 E+I+ P IG HRG EK+ E +++ Sbjct: 101 EKIIRLDPHIGLLHRGTEKLIEYKTYTQI 129 >UniRef50_C7JEU8 NADH-ubiquinone oxidoreductase 49kDa subunit n=8 Tax=Acetobacter pasteurianus RepID=C7JEU8_ACEP3 Length = 498 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 105/562 (18%), Positives = 169/562 (30%), Gaps = 71/562 (12%) Query: 34 FTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFS 93 ++ ++ D LK P+V L+ G D +G P Sbjct: 7 IWAGEETETPWRFRLQEMAWRDLVDALKHDDLPFVGLWC-DGTDVHALFLPDGQP----- 60 Query: 94 VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRR 153 L LA D P + + YER +DL+G ++R Sbjct: 61 ---------------LAATLALEDGRYPALSPARDISCLYERRIYDLYGAEGMWATDVRP 105 Query: 154 IMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMF 213 ++ W ++P + E M Sbjct: 106 LLDHDVWSSSTPLAEHPGAGGGQKGL------------------IHFQPAEHMHQEGDMA 147 Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 GP + L + I GY HRG E + R+ Sbjct: 148 DGWGPATGGMEPPLHVALAMQEGRIRAAETVTGYAHRGMELRWRNSRVEDACKLSARVAS 207 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 +++ + LAVE V + ++RV L EL RI HL ++ + GA Sbjct: 208 GQSVAHQVAFCLAVEDACKEQVGPEIRLLRVALLELERICHHLFLLADMARLAGARLVAS 267 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 R+K+ ITG R+ GG++ + + + + Sbjct: 268 GCMGLREKLIQEAAPITGSRLLMDVCVPGGLSLRHATQMGDMCGRLCEVAERDYPALLAL 327 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 + L + G+ A G G RA G D D R+ P GYE + G Sbjct: 328 WQEYPGLSMQLAGIGKVTADLLERVGLDGPTARAAGWDCDGRRMMP--GYEGI-WRFTSG 384 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 R ML +EE+ +SLR+L++ + I Sbjct: 385 RQDGTAEDRAMLLLEEVGESLRMLDEVASR----------------------------IG 416 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 S M +E M+E G Y++ + R PS A L A + Sbjct: 417 LTAGGSVQLSMQDSEGTGMVEGPWGGILYWVRL-KEGRVEQVFARNPSSAALLTFEAILP 475 Query: 574 GSLVSDLIVYLGSIDFVMSDVD 595 G D+ + S+D + +D Sbjct: 476 GHQPDDVALLARSLDINAAALD 497 >UniRef50_A5UWP3 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 Tax=Roseiflexus RepID=A5UWP3_ROSS1 Length = 358 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 85/384 (22%), Positives = 154/384 (40%), Gaps = 29/384 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L LGP HP+ G R +L + + +VD G++ RG + R + RI Sbjct: 3 YSLALGPFHPAWLGPQRFILHIADDRVVDVEYQNGFNERGCAERLPRLPLPDALHLVARI 62 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + + A+E++ V R ++RV ++EL R +HL + +G Sbjct: 63 CGECSFAHSLAFCQAIEQVQRRKVGARAALLRVAIAELERTAAHLYTARAVLDAIGMEQR 122 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 Q+ D++ +TG R+ P GG+ DL + + L M L + Sbjct: 123 GAILDHFCQQSRDMLALVTGGRIPPPVCAPGGLLRDLTPVERQEVLAMLPGMSADLYRFI 182 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + L R+ V A ++G G RA+GI DVR +PY+ Y D + P Sbjct: 183 DRLIDQRFLLMRTVEVGVLPRAAAEQFGVRGPLARASGIRRDVRVDQPYAAYSMLDVQ-P 241 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 + D Y R++L + E + ++++E L +PE + P+ P + Sbjct: 242 IIQEGGDVYARLLLLLLEAYEGVKLVESALQRLPE-----EDPIVELPHE---------- 286 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 +P ++ ++E +G Y L SDG R ++ TP Sbjct: 287 ------------LPRGQASSVVEGPRGAIRYTLESDG-VRLTRVQIDTPRQCDRLLARTL 333 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVD 595 + + + D++ L S+ ++ + Sbjct: 334 LSRAQLDDVMAILASLAVCVACAE 357 >UniRef50_Q1WLV6 Mitochondrial NADH:ubiquinone oxidoreductase 49kD subunit 7 (Fragment) n=1 Tax=Chlamydomonas incerta RepID=Q1WLV6_CHLIN Length = 277 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 120/194 (61%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 LN GP HP+AHG R+VL++ GE I+ P IG HRG EK+ E +++ +PY DR+ Sbjct: 84 FTLNFGPQHPAAHGVLRLVLEMQGEIIMRADPHIGLLHRGTEKLLEYKTYLQGLPYFDRL 143 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ E YVLA+E+L ++VP R IRV+ SE+ R+ +HLL I+ DVGA+TP Sbjct: 144 DYVSMMCMEHSYVLAIEQLLNLSVPLRGQYIRVLFSEITRVLNHLLAITCHSMDVGALTP 203 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +AF +R+K+++ E ++G RMH +FR+GGV+ DLP G R + ++ RL E Sbjct: 204 FLWAFEEREKLFEFYERVSGARMHAGYFRVGGVSQDLPIGLLRDVYDWARQFGLRLDEME 263 Query: 392 KAALQNTILKGRSQ 405 + N I K R+ Sbjct: 264 ELLTGNRIWKERTV 277 >UniRef50_D1ICJ9 Whole genome shotgun sequence of line PN40024, scaffold_246.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1ICJ9_VITVI Length = 765 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 89/267 (33%), Positives = 133/267 (49%), Gaps = 18/267 (6%) Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y+ E + AVE+L VP R IRV+ E+ RI++H L ++T DVGA TP Sbjct: 51 YVSTMAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPS 110 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL--DWMPKRLASY 390 +A +R+K+ + E ++G RMH ++ R GGVA DLP G + L DW + + Sbjct: 111 LWASEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCHVTCTELVADWAFSLIKAD 170 Query: 391 EKAALQNTILKGRSQ--------GVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 A L + R+ G + + L W GLR + +D R+A PY Sbjct: 171 PLAFLLSKSRSNRACPSPYPLCLGAGSAQERPVL-WWYGRHGLRER-VCWDSRRAAPYDV 228 Query: 443 YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE 502 ++ D ++PVG D Y R +++EE+RQS+RI+ QC N MP G KAD PP + Sbjct: 229 HDQSDPDVPVGTR-GDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSR- 286 Query: 503 RTLQHIETLITHFLQVSWGPVMPANES 529 + T I+ F VS+ P + + Sbjct: 287 ----SLGTPISFFGAVSFPVPPPRHSA 309 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 50/104 (48%) Query: 493 HPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMS 552 P T T I HF + G +PA ++ +EA KG +L S+GS Sbjct: 662 KPRTLRLIYRSRSSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEIGVFLVSNGSNRP 721 Query: 553 YRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR ++R P AH Q + + + + +D++ +G+ D V +VDR Sbjct: 722 YRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 765 >UniRef50_Q7G6A6 NAD, putative n=3 Tax=Magnoliophyta RepID=Q7G6A6_ORYSJ Length = 352 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 3/223 (1%) Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 +R LR L +RL +Y +N I R +GV +EA+ WG +G LRA+GI + Sbjct: 132 ERGLRRLLGK-RQRLLAYLAKKNRNPIFLERVEGVGFISGEEAVNWGLSGPMLRASGIQW 190 Query: 433 DVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD 492 D+RK Y Y FD+++ D R ++++ E+R+S++I++Q + +P GP++ Sbjct: 191 DLRKVDLYESYNQFDWKVQ-WQKEGDSLARYLVRIGEMRESIKIIQQAVEKIPGGPYENL 249 Query: 493 HPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMS 552 K E + S + E + +EA KG YL D S Sbjct: 250 EVRCFKKAKNSEWNDFEY-RFLGKKPSPNFELSKQELYARVEAPKGELGIYLVGDDSLFP 308 Query: 553 YRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +R ++R P F +LQ +P ++ ++D++ LGSID +M +VD Sbjct: 309 WRWKIRPPGFINLQILPQLVKKMKLADIMTILGSIDIIMGEVD 351 >UniRef50_Q978D6 Formate hydrogenlyase subunit 3 n=1 Tax=Thermoplasma volcanium RepID=Q978D6_THEVO Length = 389 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 69/422 (16%), Positives = 136/422 (32%), Gaps = 44/422 (10%) Query: 173 ATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQ 232 F K + L+ + E + N GP + Sbjct: 7 GKPEGRFVGNTEKYSVYEHILSDQRREIPSESYRNLPGEFTFNYGPATGGLIESVAFDFH 66 Query: 233 LDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAG 292 GE I R + S + +RI + + + +AVE Sbjct: 67 TPGELIKHVDVYPYIKTRKIK--VRGLSPEDALLLVERINGFHAASHAVAFEMAVEDALN 124 Query: 293 ITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGF 352 I VP+ V R+++ EL R+ S+L + + G P R+ I ++ + G Sbjct: 125 IDVPEEVQYSRIIMLELERMRSNLEVVKRLCEPAGFGVPQNQIAYLRENIARIITSFAGH 184 Query: 353 RMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGA 412 R + +GG + +L ++ + + LQ+ I R Q + Sbjct: 185 RYFFSSSYVGGCQFN-----GLVLESVIEDVKEEFEGIFNDLLQSKIFLNRLQNNGKISS 239 Query: 413 KEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQ 472 + L G RA GI+ D R Y F+ V D + R ++ +E+ Sbjct: 240 SDML-----GPAARAAGIEVDARIDEKRLPYSKLGFKPIVFDEP-DAFGRFYVRSKEILS 293 Query: 473 SLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQM 532 S ++ + + PP + + E Sbjct: 294 SADLISKAIR-----------FSGNSPPAKIEKTN-------------------GEGAAR 323 Query: 533 IEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMS 592 +E+ +G YY+ + ++ +PS +++ ++ G++ +D S +S Sbjct: 324 VESPQGDLFYYVKIN-DGKISDVQISSPSLLNIEAFKKSMIGNIFTDYHFNWESFGIWVS 382 Query: 593 DV 594 ++ Sbjct: 383 EL 384 >UniRef50_UPI000038DF6E Ni,Fe-hydrogenase III large subunit n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038DF6E Length = 384 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 76/401 (18%), Positives = 150/401 (37%), Gaps = 50/401 (12%) Query: 196 KPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKM 255 E + +N ++ N GP+ + L GE I D + Y R + + Sbjct: 29 PAVENTDQFADKNPGEIYFNYGPSAGGLRESVNFSLLTPGETIRDVIIHPEYKKRDLKIL 88 Query: 256 GERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH 315 G+ + +RI N + Y+LAVE+ GI + +N +R++ EL RI S+ Sbjct: 89 GD--PVSRALLKVERINGFHAASNSIGYILAVEEALGIENSE-LNDMRIVELELERIRSN 145 Query: 316 LLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL 375 + I + G P R+++ ++ G R + G V+ D Sbjct: 146 IDVIKGMCESAGFAVPEKQLLYLREEVARIISRAFGHRYFFSVNGFGTVSGDFSTI---- 201 Query: 376 LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR 435 L+ + K+ L + I R Q + +TG RA G FD R Sbjct: 202 ---KLNAIEKQFRDIYDGLLSSKIFLDRIQENGIVKNE-----NSTGPAARAAGFKFDAR 253 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPL 495 K Y NF PV +D ++R++++ EE+ +++ I++ Sbjct: 254 KDSKSLDYRNF---TPVTESGADSFSRLVVRSEEVFEAINIID----------------- 293 Query: 496 TTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT 555 + + + + + + IE+ G YY+ + + Sbjct: 294 -------------SYGVKNIKTRTKNELTGSGKGSARIESPAGDIFYYVNIE-NGKLNDI 339 Query: 556 RVRTPSFAHLQQIPAAIRGSLV-SDLIVYLGSIDFVMSDVD 595 ++ +PS+ +L+ A++ + + +D S +S+++ Sbjct: 340 QMVSPSYLNLRLFREALKNNNIFTDFFFVWESFGIWISELE 380 >UniRef50_D1ICJ3 Whole genome shotgun sequence of line PN40024, scaffold_246.assembly12x (Fragment) n=14 Tax=Embryophyta RepID=D1ICJ3_VITVI Length = 385 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 92/405 (22%), Positives = 161/405 (39%), Gaps = 50/405 (12%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 N GP HP+AHG R VL+++GE + P IG +G EK+ E +++ +PY+DR Sbjct: 11 FTSNSGPQHPAAHGVSRSVLEMNGEVVERAEPHIGSL-QGTEKLIEYKTYLQALPYSDRS 69 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFR------INSHLLYISTFIQD 325 E G E + P R+ EL R I S + ++ Sbjct: 70 EGDRG-----------EITSRANDPLRLTECTGKERELGRSILWRSIRSITAHSHDLCRE 118 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAW---------FRIGGVAHDLPRGWDRLL 376 +GA F +++ L++ G R R+G ++ R D Sbjct: 119 IGA-------FGGTGELHLLLDRCVGQRARGTCCPPFPLCFENRLGIQWCNVKRSCD--- 168 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYG-AKEALEWGTTGAGLRATGIDFDVR 435 M +A + K N K + V + +W + ++A + F + Sbjct: 169 ------MKTLIAIWGKFPSGNNASKSEGRAVGHVTCTELVADWAFS--LIKADPLAFLLS 220 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILE----QCLNNMPEGPFKA 491 K+R EI G +R + K++ ++LR+ + + + + + Sbjct: 221 KSRSNRACPGTSNEIANGQREGSGLSRALAKLDSHSKALRVSKVLSGERWDRLYNRGSRC 280 Query: 492 DHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM 551 L+ T I HF + G +PA ++ +EA KG +L S+GS Sbjct: 281 KLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPKGEFGVFLVSNGSNR 340 Query: 552 SYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR ++R P AH Q + + + + +D++ +G+ D V +VDR Sbjct: 341 PYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 385 >UniRef50_Q9KGW7 NADH dehydrogenase I subunit C n=3 Tax=cellular organisms RepID=Q9KGW7_PSEFL Length = 200 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 107/164 (65%), Positives = 131/164 (79%), Gaps = 2/164 (1%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMD 77 D V+ EL NRFGP+AFT Q TRTG+PV+W+ R +L+EV FL+ LPKPYVML+DLHG+D Sbjct: 16 DQDVVVELNNRFGPEAFTAQPTRTGMPVLWVARAKLVEVLTFLRNLPKPYVMLYDLHGVD 75 Query: 78 ERLRTHREGLP-AADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 ERLRT R+GLP DF+VFYHL+SI+RN D+M+KVAL+E+DL VPT T ++PNANWYERE Sbjct: 76 ERLRTKRQGLPDGVDFTVFYHLMSIERNSDVMIKVALSESDLSVPTVTGIWPNANWYERE 135 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE 180 WD+FGI F GHP+L RIMMP TW+GHPLRKD P P + Sbjct: 136 VWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKD-PGPCHRVRPVQ 178 >UniRef50_UPI0001985C72 PREDICTED: similar to NADH dehydrogenase subunit 7 n=1 Tax=Vitis vinifera RepID=UPI0001985C72 Length = 238 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 82/155 (52%) Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y+ E + AVE+L VP R IRV+ E+ RI++H L ++T DVGA TP Sbjct: 81 YVSTMAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPS 140 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 +A +R+K+ + E ++G RMH ++ R GGVA DLP G R + R+ E+ Sbjct: 141 LWASEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSSTQQFASRIDELEE 200 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRA 427 + N I K R + A++A +WG +G LR Sbjct: 201 MSTGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 235 >UniRef50_B5ZIZ9 Ni Fe-hydrogenase III large subunit-like protein n=3 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZIZ9_GLUDA Length = 510 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 101/570 (17%), Positives = 178/570 (31%), Gaps = 85/570 (14%) Query: 34 FTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFS 93 G ++ E ++ L + P P+V L+ D Sbjct: 17 IRRGEAEAGAWRFRLEEEGWRDLVATLARDPLPFVGLW---------------ADGQDV- 60 Query: 94 VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRR 153 H + ++ +++ ++A + + P A+ ER DL+G + R Sbjct: 61 ---HALFLEGGERVLV-ASVAPYGGRYLGLSGVRPAASLPERCVHDLWGFEAMEARDTRP 116 Query: 154 IMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMF 213 + W A L + + Sbjct: 117 WLDHGVW----------------------TATWPLGPRPGPVSWPPDPPEFRPQPGGGTI 154 Query: 214 LNLGPNHPSAHGAFRIVLQLDG-EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 L +GP H + L L G + + +GY HRG + + R Sbjct: 155 LGIGPADGGHHTPGHLRLALGGRDTVGGAEWRLGYAHRGVMARLCGLDAPAAVRLAGRAA 214 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 ++ A+E + V RV+L+E+ R+ +HL ++ + GA Sbjct: 215 AGASVAHQSALCRAIEAASDSMVGTGTERCRVLLAEIERVATHLHDVARTARAAGATALA 274 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV-----AHDLPRGW--DRLLREFLDWMPK 385 R+ + DL + G R+ R G A D G + R+ D + Sbjct: 275 AECEYLRESVMDLCGRMFGHRLLMDLVRPEGPDGHAGAGDAEDGAAIAAVARQVADLVRG 334 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 R+ + L+ R G G A G G RA+ + D+R+ P GY Sbjct: 335 RMRVVGRC-RDWPGLEARVVGRGVLGEHTARMLGVGGVAGRASAREEDLRRLVP--GY-R 390 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 + D R+ L++ E+ S+RILE + P P T PP+ Sbjct: 391 LGWLDTGVRRAGDVAARIDLRLAEIGGSVRILESAGADGP-------LPGTGTPPRR--- 440 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 E E +G Y++ +G VR P+ AH+ Sbjct: 441 --------------------DGEGVGCAEGPRGAVWYWVRMEG-GAVRAAHVRDPALAHV 479 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + + G+ D+ + + S + D Sbjct: 480 AALEHVLAGADADDVAMIVRSFGLSAAAAD 509 >UniRef50_D2PJN4 Formate hydrogenlyase subunit 5 (HycE) n=10 Tax=Sulfolobaceae RepID=D2PJN4_SULIS Length = 391 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 75/428 (17%), Positives = 146/428 (34%), Gaps = 43/428 (10%) Query: 167 KDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGA 226 K Y L + +T + E T+ GP+ Sbjct: 2 KYYKWTQKGEGRKIGKIGDYCLYEKTITEEKCEENKPNITQTYGSFKFIYGPSAGGLLET 61 Query: 227 FRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLA 286 + ++ +GE+I+ ++ Y +R E + + + +RI + + ++LA Sbjct: 62 IKFIITTNGEKILGIDAEV-YKNR--EIVISGLTVDDALLRVERINAPFSASHTISFLLA 118 Query: 287 VEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLV 346 VE + + R+ EL RI +HL IS + P + +K+ L+ Sbjct: 119 VEDSLELEQDYPTQLKRIAEIELERIRNHLFVISRLTETTSLNVPTYHLLHLVEKVNRLI 178 Query: 347 EAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQG 406 + G R I GV D L +D + K L++ I R Q Sbjct: 179 GKMCGHRYFFGVNAINGVNCDF-----GNLLRIID-ITKEFKQIFDGLLESRIFIDRLQE 232 Query: 407 VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLK 466 ++ + G RA G+ +D RK YE+ F + D + R +++ Sbjct: 233 NGKI-----IDENSIGPAARAAGLTYDARKDFKALPYEDLGFRTVITQEA-DSFGRFLVR 286 Query: 467 VEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPA 526 E+ +S +IL + + + + E H Sbjct: 287 GMEIIESAKILVELHDEI-------------------KNSNNERGKNH--------KQGG 319 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 E +E+ G +YY+ + + + + TPS +L ++ ++ +D S Sbjct: 320 GEGLARVESPSGDLAYYVKLN-NGIIDSVSLLTPSQVNLNLFLKSVINTIFTDFQFNWES 378 Query: 587 IDFVMSDV 594 +S++ Sbjct: 379 FGIWVSEI 386 >UniRef50_Q1PWG9 NADH-quinone oxidoreductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWG9_9BACT Length = 166 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 9/171 (5%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGM 76 +D +I +++ F P+A T G IK+E +++V +F KK + L D+ G+ Sbjct: 3 NDSIITLVKSHF-PEAITDCYDFRGELTFVIKKEHIMQVAEFFKKNEELECDYLSDVCGV 61 Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D+ F V YHL S+ + + LKV + ++ + T T ++ ANW+ERE Sbjct: 62 DKIE-------TNGVFEVVYHLYSMQKKHRVRLKVPVPSDNPTISTVTHIWKTANWHERE 114 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQD 187 T+D+FGI F GHP+LR+I+MP+ ++GHPLRKDYP + + K + Sbjct: 115 TYDMFGIQFQGHPDLRKILMPEDFEGHPLRKDYPIDGRQPASLRAIYRKDE 165 >UniRef50_Q0CI54 NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial n=7 Tax=Eukaryota RepID=Q0CI54_ASPTN Length = 688 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 94/206 (45%), Gaps = 19/206 (9%) Query: 38 ATRTGVPVVWIKREQLLEVGDFLKKL-PKPYVMLFDLHGMDERLRTHREGLPAADFSVFY 96 + V+++ ++ V FLK Y + D+ +D R R F V Y Sbjct: 49 SVWKDELVIYVPPTGVIPVMSFLKYHTAAEYTQISDITAVDFPTRDQR-------FEVVY 101 Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 +L+S+ N I +K E VP+ T LF A WYERE +D+FG+ F GHP+LRRIM Sbjct: 102 NLLSVRYNSRIRVKTYADEARP-VPSVTGLFEGALWYEREVYDMFGVFFSGHPDLRRIMT 160 Query: 157 PQTWKGHPLRKDYPARATEFSPFELTKAKQDLE----------MEALTFKPEEWGMKRGT 206 + GHPLRKD+P ++ K + +E E T E G+ + Sbjct: 161 DYGFDGHPLRKDFPLTGYTELRYDEEKKRIVIEPLELTQAFRNFEGGTAAWEPVGLGQDR 220 Query: 207 ENEDFMFLNLGPNHPSAHGAFRIVLQ 232 + E +M + + PS A RI+ Sbjct: 221 KPESYMRKFVCGDSPSPVLARRILFS 246 >UniRef50_Q0EZQ7 NADH-quinone oxidoreductase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZQ7_9PROT Length = 210 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 8/176 (4%) Query: 1 MTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFL 60 MT+ Q+ T + P + LR RFG V+A P V + RE + E +L Sbjct: 6 MTEEKLQDDIGVTAETALPPEVDGLRKRFGDQVLDVEA-GLDCPSVTLARECIAEACHYL 64 Query: 61 KKLPKPYVMLFDLHGMDERLRTHREGLPAA--DFSVFYHLISIDRNRDIMLKVALAENDL 118 K + + D+ G+D R+ G PA F V Y L+S+ RN I LKV E DL Sbjct: 65 KG-EHSFEQVMDICGVD---RSDYRGWPADAPRFQVVYQLLSVSRNCRIRLKVGANERDL 120 Query: 119 HVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARAT 174 V + T+++P ANW+ERE +D++GI F+ HP+LRR++ ++G+PLRKD+P Sbjct: 121 -VDSVTEVWPTANWFEREAFDMYGIIFNHHPDLRRLLTDYGFEGYPLRKDFPVTGR 175 >UniRef50_B5YKI4 NADH-quinone oxidoreductase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKI4_THEYD Length = 177 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 8/156 (5%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDE 78 +I +R++F + R + +K+E++ ++ LK P+ + L DL +D Sbjct: 5 EIIKRIRDKFSDEVLWFICFR-DECSIVVKKEKIKDILSHLKNTPELEFDYLIDLTAVDY 63 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 G F V YHL+SI I +K + E + + L+ ANW+ERE + Sbjct: 64 L------GFREPRFDVVYHLMSIKHKHRIRIKAQVPEQGCCIDSVADLWATANWFERECY 117 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARAT 174 D+FGI F GHP+LRRI+MP+ W G PLRKDYP ++ Sbjct: 118 DMFGIEFTGHPDLRRILMPEDWNGFPLRKDYPVKSE 153 >UniRef50_Q2W3I6 NADH-quinone oxidoreductase subunit C n=6 Tax=cellular organisms RepID=NUOC_MAGSA Length = 199 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 16/185 (8%) Query: 23 GELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKL-PKPYVMLFDLHGMDERLR 81 + D + R G + +K +++V +LK + L D+ G+D R Sbjct: 10 EYIAQALPQDVLGTEVNRCGELSLTVKAASIVKVMTYLKDDAGCLFKQLVDVCGVDWPGR 69 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 R F V YHL+S+ N+ + +KVA E VP+ T +F +A W+ERE WD++ Sbjct: 70 EQR-------FDVVYHLLSMKHNQRVRVKVATDEE-TAVPSVTGVFSSAGWFEREVWDMY 121 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWG 201 G+ F HP+LRRI+ ++GHPLRKD+P + + D E + + ++P + Sbjct: 122 GVLFSDHPDLRRILTDYGFEGHPLRKDFPLTG-------YVEMRYDDETKRVVYEPVKLT 174 Query: 202 MKRGT 206 + Sbjct: 175 QDFRS 179 >UniRef50_A4GJ20 NADH-quinone oxidoreductase n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ20_9DELT Length = 161 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 8/159 (5%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGM 76 D +I ++ ++ R G V +K++ E FL+ + ++ L D+ + Sbjct: 3 DKKIIERIKEQYASAVIDSHDFR-GDQTVTMKKDCGNEFFQFLRDDSELAFIFLMDITAV 61 Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D + F V YH S+ N + +K+ +AE D + T + ANWYERE Sbjct: 62 DYLSK------KDERFEVVYHFYSLKYNHRLRVKIPVAEEDCVAESITPFWKTANWYERE 115 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATE 175 WD++GI F HPNLRRI+M + +KGHPLRKDYP + Sbjct: 116 IWDMYGIKFRNHPNLRRILMYEEFKGHPLRKDYPINKRQ 154 >UniRef50_A7NIW0 NADH-quinone oxidoreductase subunit C n=6 Tax=Chloroflexi (class) RepID=NUOC_ROSCS Length = 174 Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 66/162 (40%), Positives = 94/162 (58%), Gaps = 8/162 (4%) Query: 17 LDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHG 75 LD+P + PDA + G V ++ E++++V FL+ P+ Y L +L G Sbjct: 3 LDNPTVLARLQAALPDALLGSSEFRGDLSVHVRPERIVDVARFLRDDPELRYHFLENLCG 62 Query: 76 MDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYER 135 +D R R F V YHL+S I LKV ++E + VP+ T+L+P AN++ER Sbjct: 63 VDYLGREPR-------FEVVYHLLSFANRHRICLKVGVSERNPSVPSLTELWPGANYHER 115 Query: 136 ETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 177 ET+D+FGI F GHP L RI+MP+ W+GHPLRKD P A E + Sbjct: 116 ETFDMFGIVFTGHPCLDRILMPEDWEGHPLRKDVPLGAEEVA 157 >UniRef50_Q6L0U1 Formate hydrogenlyase subunit 5 n=1 Tax=Picrophilus torridus RepID=Q6L0U1_PICTO Length = 381 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 59/408 (14%), Positives = 130/408 (31%), Gaps = 49/408 (12%) Query: 186 QDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDI 245 DL + A T+ ++ + + + GP FR + GE+I Sbjct: 18 GDLTIYARTYNYDDIEHENEKRTDFSFNFSYGPLTGGIPEPFRFDINTSGEKINYIKYYN 77 Query: 246 GYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVM 305 Y R + + + IPY +RI + ++ +V I +P + + ++ Sbjct: 78 -YKIRNIK--LKGINIKDAIPYIERINGNFAASYTICFLSSVMDALEIEIPYELKMYYII 134 Query: 306 LSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA 365 EL RI +HL ++ + G P +++ +++ G R ++ Sbjct: 135 EMELERIRNHLYVLARMCEPAGFNVPANMLMHIKERFSRIIDITFGHRYFFGVNQLKSKR 194 Query: 366 HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGL 425 D+ + ++ + L + + R Q + TG Sbjct: 195 LDIH--------KMINVYKNEINDIYLNLLNSRLFTDRLQDNGRILDDD-----MTGPAA 241 Query: 426 RATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP 485 RA G +D R Y + +EI D +R ++ E+ S+ I+E Sbjct: 242 RAAGYKYDSRYDFDIFYYNDTGYEIKT-DDSGDAMSRFNVRFNEILNSIDIIENA----- 295 Query: 486 EGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT 545 + + + +E+ G ++Y+ Sbjct: 296 --------------------------ENKTGDSCYNILDGSGTGLTRVESPSGDVAFYVE 329 Query: 546 SDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSD 593 + + ++ T +++ + G++ +D S +D Sbjct: 330 L-SNGVIKDLKIHTALERNMKSFLKSSTGTIFTDFHFNFESFGLWAAD 376 >UniRef50_B5YL31 NADH-quinone oxidoreductase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL31_THEYD Length = 201 Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 11/170 (6%) Query: 8 EPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPY 67 E A T + L + +L+ +F + ++ R G V +K ++ E+ +LK + + Sbjct: 27 EGARATEESLK--IAYKLKEQFPEEVIEIKEFR-GQVSVIVKSNKIKEILKYLKNQ-QGF 82 Query: 68 VMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLF 127 L DL G+D R F + Y+L SI R I ++ + E + + T L+ Sbjct: 83 NHLQDLCGVDYSPEKPR-------FEIVYNLYSIWRRLHIRVRAKVNEETPELDSVTDLW 135 Query: 128 PNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 177 ANW+ERE +D+FGI F GHP+LRRI+MP+ W G+PLRKDYP + E Sbjct: 136 EGANWHERECFDMFGIRFIGHPDLRRILMPEDWNGYPLRKDYPLKGKELW 185 >UniRef50_P23710 NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial n=65 Tax=Eukaryota RepID=NDUS3_NEUCR Length = 283 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 21/190 (11%) Query: 31 PDAFTVQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMDERLRTHREGLPA 89 P + ++I ++ V FLK Y + D+ +D + R Sbjct: 85 PKYIQQFSVWKDELTIYISPAGVIPVFSFLKYNTAAEYTQVSDITAVDFPTKDQR----- 139 Query: 90 ADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 F V Y+L+S+ N I +K E VP+ T L+ ANWYERE +DLFG+ F GHP Sbjct: 140 --FEVVYNLLSVRHNSRIRVKTYADEVSP-VPSITPLYDGANWYEREVYDLFGVFFTGHP 196 Query: 150 NLRRIMMPQTWKGHPLRKDYPARATEF------------SPFELTKAKQDLEMEALTFKP 197 +LRRIM + GHPLRKD+P P E+T+A ++ E + ++ Sbjct: 197 DLRRIMTDYGFDGHPLRKDFPMTGYTEIRYDEEKKRIVTEPLEMTQAFRNFEGGSSAWEQ 256 Query: 198 EEWGMKRGTE 207 G+ R E Sbjct: 257 VGAGIDRKPE 266 >UniRef50_A5G9B7 NADH-quinone oxidoreductase subunit C n=9 Tax=Desulfuromonadales RepID=NUOC_GEOUR Length = 164 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 9/163 (5%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMD 77 ++ + +LR +F V+ R G V +++E ++ + FLK+ Y +L D+ +D Sbjct: 7 NNRAVIKLREKFASSILEVKEFR-GEVTVIVRKEDIVALCKFLKE-ELRYNLLTDVTAVD 64 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERET 137 + R F V Y++ SI + +K + E + + T ++ ANW ERE Sbjct: 65 YLGKDPR-------FMVVYNIYSIPNKDRLRIKAPVTEGECTIDTVCGVWTTANWLEREA 117 Query: 138 WDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE 180 +DL GI F HP+LRRIMM W GHPLRKDYP + + P++ Sbjct: 118 YDLMGIIFKNHPDLRRIMMTDDWVGHPLRKDYPLQGPDREPYK 160 >UniRef50_B3PY58 NADH-quinone oxidoreductase subunit C 2 n=9 Tax=Rhizobiaceae RepID=NUOC2_RHIE6 Length = 187 Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 10/186 (5%) Query: 23 GELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLR 81 + RFG D T G+ V + E+++E FLK+ P + L D+ G+D Sbjct: 10 APIMERFG-DTIEDLGTAHGIDVFAVPPERIVEFCRFLKEHPAMQFNFLSDICGVDHYPE 68 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 T R F YHL S+ + +K L + VP+ T ++ ANW+ERE WD++ Sbjct: 69 TPR-------FEAVYHLYSLPNRWRVRIKCRLGDP-PEVPSVTGVWRTANWHEREAWDMY 120 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWG 201 GI F GHP+LRRI M + ++G P RKD+P R + L + G Sbjct: 121 GIRFAGHPDLRRIYMWEGFEGFPQRKDFPLRGYKDKLNPFGAEGPPPTQPDLATRDIPQG 180 Query: 202 MKRGTE 207 E Sbjct: 181 RPSTPE 186 >UniRef50_B8GAR8 NADH-ubiquinone oxidoreductase chain 49kDa n=3 Tax=Chloroflexus RepID=B8GAR8_CHLAD Length = 365 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 81/388 (20%), Positives = 142/388 (36%), Gaps = 46/388 (11%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIG-----YHHRGAEKMGERQSWHSYIP 266 L L P + H + ++ L ++GE I D Y R + GE + Sbjct: 3 YQLTLHPVAGAWH-SEQLTLTVEGEYIRDVEYRPATGDGAYAQRLLQGGGES-----AVR 56 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 ++ + + LA+E LA IT P R IRV+++EL R SH+ ++ I + Sbjct: 57 AAAQVCPYCSVAHTLALSLALEALAEITAPLRAQAIRVIVAELERAASHMNTLAALIAAL 116 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 G + + + +I ++ A+ G A+ R GG+A ++ + Sbjct: 117 GLNSATRLSQLE-TRIRSILLALLGHH-EAAYIRPGGLAEPPDEARLADTERAINELLPH 174 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + + + L R + + A ++G G RA+ I D R PY+GY Sbjct: 175 MIELAEQTIPRRTLVARMVDIGVLTTEAARQFGLAGPLGRASDITTDQRIDAPYAGYTVL 234 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 + V G D + R ++ + E +SLR+ + L+N+P G L Sbjct: 235 TPALVVEQG-GDVHARAVVLLIEAIESLRLAVRWLHNLPIGETYTAFTLRL--------- 284 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV-RTPSFAHL 565 E +EA +G Y + SDG + P L Sbjct: 285 --------------------GEGTATVEAPRGPLRYTVRSDG-QRLTAVEIGIAPQLDRL 323 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSD 593 ++ + V D ++ S D + Sbjct: 324 LA-RTLLQNAAVDDTLLIAISTDPCTAC 350 >UniRef50_A8IHL3 NADH:ubiquinone oxidoreductase ND9 subunit n=2 Tax=Chlamydomonas reinhardtii RepID=A8IHL3_CHLRE Length = 282 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 9/144 (6%) Query: 43 VPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISI 101 P ++ E L+ + FL+ + L D+ +D R AA F V YHL+S Sbjct: 121 EPTIYTTPESLVPLMVFLRDHTNTQFKCLLDVTAVDFPER-------AARFEVVYHLLSP 173 Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 N I +KV + E VPT K+F ANW+ERETWD+FG+ F GHP+LRRI+ + Sbjct: 174 RWNNRIRVKVCVDEV-TAVPTLCKVFNTANWFERETWDMFGVFFSGHPDLRRILTDYGFT 232 Query: 162 GHPLRKDYPARATEFSPFELTKAK 185 GHPLRKD+P + ++ K + Sbjct: 233 GHPLRKDFPMTGYQEVRYDYGKKR 256 >UniRef50_UPI0001926F1C PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein 3, (NADH-coenzyme Q reductase) n=1 Tax=Hydra magnipapillata RepID=UPI0001926F1C Length = 268 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 16/224 (7%) Query: 10 AWQTRDHLDDPVIGELRN--RFGPDAFT-----VQATRTGVPVVWIKREQLLEVGDFLKK 62 + D P L +F D+ + T V I + ++ + FL+ Sbjct: 53 SSTAVSTQDSPTTTRLMEFGQFVSDSMPKFVQSAEVTEGDELQVLISPDGIIPILTFLRD 112 Query: 63 LP-KPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVP 121 + L D+ +D + +R F + Y+L+S+ N I +K E + Sbjct: 113 HTNAQFKQLMDITAVDWPSKPYR-------FEIVYNLLSVRYNTRIRVKTYTDELTP-LD 164 Query: 122 TFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFEL 181 + + LF +ANW ERE WD++G+ F HP+LRRI+ ++GHPLRKD+P ++ Sbjct: 165 SASSLFHSANWAEREIWDMYGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGFYEIRYDS 224 Query: 182 TKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHG 225 + + L + ++ ++ E + + Sbjct: 225 ELKRLVQDPVELAQEFRKFELQSPWEQFPKHRKTVAKLESAKKE 268 >UniRef50_Q28T74 NADH-quinone oxidoreductase subunit C n=7 Tax=Alphaproteobacteria RepID=NUOC_JANSC Length = 207 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 11/200 (5%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMD 77 + L + D + G V + Q++ +FLK + L D+ +D Sbjct: 6 KELAEYLSEKRSDDVVSTDVNAMGELSVTVAPAQMVGFIEFLKTDRTCRFSTLIDITAVD 65 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERET 137 R R F V YH +S+ +N + ++ A+ E D +P+ + + P A WYERE Sbjct: 66 YPSRDRR-------FDVVYHFLSMYQNHRVRVRAAIREEDT-LPSISGVHPGAGWYEREI 117 Query: 138 WDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKP 197 +D+FGI F GH +LRR++ ++GHPLRKD+P ++ + + + E ++ Sbjct: 118 YDMFGILFTGHADLRRLLTDYGFRGHPLRKDFPTTG--YTEVRYDEELKRVVYEPVSLVQ 175 Query: 198 EEWGMKRGTENEDFMFLNLG 217 E + E ++ G Sbjct: 176 EYRQFDFMSPWEGAQYVLPG 195 >UniRef50_D1CCD3 NADH-quinone oxidoreductase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCD3_THET1 Length = 179 Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 11/168 (6%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDE 78 P+I L+ P A G + + ++L+++ L+ P + L D+ +D Sbjct: 21 PIINTLQEII-PGAIEEVTVFRGETTIVVPVDRLIDIARTLRDNPAMQFNYLVDVTAVDW 79 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 RT R F V YHL SI N I +KV + + HVP+ T L+ ANW ERET+ Sbjct: 80 LGRTPR-------FDVVYHLYSIPLNHAIRMKVRVDDGQ-HVPSLTGLWELANWGERETY 131 Query: 139 DLFGITFDGHPNLRRIMMPQTW-KGHPLRKDYPARATEFSPFELTKAK 185 D+FGI F+GHP+LRRI++P+ W G PLRKD+P E + Sbjct: 132 DMFGIVFEGHPDLRRILLPEDWQDGFPLRKDFPIGGYGIWAAENVPFR 179 >UniRef50_Q5FU77 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FU77_GLUOX Length = 479 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 86/473 (18%), Positives = 146/473 (30%), Gaps = 72/473 (15%) Query: 124 TKLFPNANWYERETWDLFGITFDGH-PNLRRIMMPQTWKG-HPLRKDYPARATEFSPFEL 181 + F A W ER +DL+G+ N + W PL P Sbjct: 75 SSRFAGAEWGERVAYDLYGVEAMDARGNGAPALDEGGWTSTWPL---------SSRPGPA 125 Query: 182 TKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDC 241 + L L L P G + ++ ++ Sbjct: 126 AGGLRPLAGSHL----------------------LRPEQTGLSGPLELSFEVLKGKVRSV 163 Query: 242 VPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNV 301 G HRG ++ +P R+ G + + + AV + G+ + Sbjct: 164 EVCAGGAHRGVVSRLLGRTPEEAMPLVSRMTAGGFVAHPLAFARAVAQARGLVPGPGIRD 223 Query: 302 IRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRI 361 + ++L E+ R++ HL ++ + V A R+ I R Sbjct: 224 VWMVLLEIERMSLHLFDMARTARGVDAELLATHCDHAREAIARACAEQGVSRRLMDMVAC 283 Query: 362 GGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTT 421 G L L + M RLA+ E+ + + R G A + A + Sbjct: 284 DGFRDGL--EIVPLAQAVHAAMQPRLAALEEL---HRVFAPRLDGFAVLDVRLAERFAVG 338 Query: 422 GAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCL 481 G RA+G D+R+ + G D R L++ E+R SL++LE+ L Sbjct: 339 GVTGRASGRSMDMRRREAGM---RLEALRATGSSQGDARAREGLRLAEIRDSLKLLERIL 395 Query: 482 NNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINS 541 G + P + E + E +G Sbjct: 396 -----GSIGLEDDEPAPDRTD-------------------------EGIGVAEGARGDVW 425 Query: 542 YYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 Y++ VR P + L + A +RG VS + LGSI + + Sbjct: 426 YWVRL-KEGRIESLHVRDPGVSLLPVLGAMLRGYPVSRVPAALGSIGISPAGI 477 >UniRef50_A9W1N1 NADH-quinone oxidoreductase subunit C n=9 Tax=Alphaproteobacteria RepID=NUOC_METEP Length = 219 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 10/191 (5%) Query: 23 GELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGMDERLR 81 + GP A T A G + ++ ++ +L+ P + D+ G+D R Sbjct: 29 ERIAGALGP-AVTEWAITRGELTLVVQGSDIVYALTYLRDEPACAFRCFIDICGVDYPQR 87 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 R F V YHL+S+ N + +KV VP+ +FP ANWYERET+DL+ Sbjct: 88 ARR-------FDVVYHLLSLRHNMRVRVKVQTDAATP-VPSAIPVFPAANWYERETYDLY 139 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWG 201 GI F GHP+LRR++ ++GHPLRKD+P ++ +A+ E LT + + Sbjct: 140 GILFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDEARVVYEPVKLTQEFRNFD 199 Query: 202 MKRGTENEDFM 212 E D++ Sbjct: 200 FLSPWEGTDYV 210 >UniRef50_Q2G5Y5 NADH-quinone oxidoreductase subunit C n=36 Tax=Alphaproteobacteria RepID=NUOC_NOVAD Length = 309 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 16/209 (7%) Query: 9 PAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYV 68 P W + + + D ++ L D G ++ + R+++ + L+ Y Sbjct: 8 PRWSSNEGVLDTLVAAL-----GDMVAASREEHGEILLTVVRDRVEDALRLLRDD-HEYQ 61 Query: 69 MLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFP 128 L D+ G+D R R F V Y L+S+ +N +++KV+ E VPT T L+P Sbjct: 62 QLMDIAGVDYPQRAER-------FDVCYCLLSVTKNHRVIVKVSTDEATP-VPTVTTLWP 113 Query: 129 NANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDL 188 NA WYERE +D+FG+ F G+P+LRRI+ ++GHP RKD+P + ++ + + Sbjct: 114 NAGWYEREVYDMFGVLFAGNPDLRRILTDYGFQGHPFRKDFPLTG--YVELRYSEEDKRV 171 Query: 189 EMEALTFKPEEWGMKRGTENEDFMFLNLG 217 E + + + E ++ G Sbjct: 172 VYEPVQLAQDLRQFDFMSPWEGADYVLPG 200 >UniRef50_B3QUS1 NADH-quinone oxidoreductase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUS1_CHLT3 Length = 177 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 9/152 (5%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 + V L++ F P A +K+E + E+ FLK+ + + D+ G D Sbjct: 3 NKVSIALQSAF-PKALLETTKFRNELTFRVKKENIREISQFLKE-ELGFNLCVDICGADR 60 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R F V Y+L++++ N I LKV L E H+P+ ++P A+WYERET+ Sbjct: 61 FNEEPR-------FEVIYNLMNLEHNTRIRLKVWLEEAKPHLPSVISVWPAADWYERETY 113 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 D+FGI F HP++RRI MP+ ++ P+RK++P Sbjct: 114 DMFGIVFVNHPDMRRIYMPEDFEYFPMRKEFP 145 >UniRef50_A9MAI1 NADH-quinone oxidoreductase subunit C n=86 Tax=cellular organisms RepID=NUOC_BRUC2 Length = 202 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 12/204 (5%) Query: 15 DHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKL-PKPYVMLFDL 73 + + G +R R G DA G + + L+ V FL+ +V L D+ Sbjct: 3 EEALGELSGYIRERLG-DAIEEANLAYGELTLCVPVASLIGVLTFLRDDVQCQFVNLTDI 61 Query: 74 HGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWY 133 G+D R R F V Y L+S +N+ I +KV A+ D VP+ +F A WY Sbjct: 62 SGVDYPQREKR-------FDVVYQLLSPRQNQRIRVKVQ-ADEDTLVPSAVPVFFGAEWY 113 Query: 134 ERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEAL 193 ERE +D++GI F GHP+LRRI+ ++GHPLRKD+P F + + E + Sbjct: 114 EREAYDMYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTG--FVEVRYNDELKRVVYEPV 171 Query: 194 TFKPEEWGMKRGTENEDFMFLNLG 217 + E + E ++ G Sbjct: 172 QLRQEFRNFDFLSPWEGTDYVLPG 195 >UniRef50_A1SE29 NADH-quinone oxidoreductase subunit C n=166 Tax=Bacteria RepID=NUOC_NOCSJ Length = 250 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 84/188 (44%), Gaps = 7/188 (3%) Query: 6 AQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK 65 AQ P D + D + R A G ++RE LL V L+ + Sbjct: 68 AQRPYGGWFDEVADGLAAATREAGLEIAAPRVVIHRGEITFHLRREDLLPVAQVLRDDER 127 Query: 66 -PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFT 124 + + G+ H + YHL+S+ NR I L+VA+ + D H+P+ Sbjct: 128 LRFEFCAGVSGV------HYPDETGRELHAVYHLLSMTHNRRIRLEVAVPDADPHIPSIV 181 Query: 125 KLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKA 184 ++P +W+ERET+D+FGI FDGHP L RI+MP W GHP RKDYP T Sbjct: 182 PVYPTNDWHERETYDMFGIIFDGHPALTRILMPDDWPGHPQRKDYPLGGVPVEYKGGTVP 241 Query: 185 KQDLEMEA 192 D Sbjct: 242 PPDQRRSY 249 >UniRef50_C6XG24 NADH-quinone oxidoreductase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG24_LIBAP Length = 202 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 16/159 (10%) Query: 42 GVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGMDERLRTHREGLPAADFSVFYHLIS 100 G + + L+ + FL+ P +V + DL G+D R++R F V YH +S Sbjct: 28 GELSLDVDCGDLVSLCSFLRDDPHCCFVNIIDLCGVDFLSRSNR-------FDVVYHFLS 80 Query: 101 IDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW 160 NR + +K+A+AE VP+ ++P A+W+ERE WD++GI F+GHP+LRRI+ + Sbjct: 81 PKYNRRLRVKIAVAEGK-SVPSIVGIYPGADWFEREVWDMYGIFFEGHPDLRRILTDYGF 139 Query: 161 KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEE 199 +GHPLRKD+P + D +++ + ++P E Sbjct: 140 EGHPLRKDFPVTG-------FVELHYDDKVKKVVYRPVE 171 >UniRef50_Q1IS34 NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IS34_ACIBL Length = 165 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 61/171 (35%), Positives = 84/171 (49%), Gaps = 12/171 (7%) Query: 8 EPAWQTRDHLDDPVIGELRNRFGPDAFTVQATR--TGVPVVWIKREQLLEVGDFLKKLPK 65 EPA + L D L D+ V+ + +W+ RE L++ L+ + Sbjct: 4 EPAITDVEQLKDK--PALAKLLASDSIVVEQVKWDRDELSIWVSRESLVDAVKLLRDSSE 61 Query: 66 -PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFT 124 + L D+ D F V YH +SI R + LKV L +D V + Sbjct: 62 TQFTFLSDVTCTDWYP-------SEPRFEVSYHFLSIPRKDRVRLKVKLLGDDAQVDSLF 114 Query: 125 KLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATE 175 +FP+ N++ERE +DLFG+ F GHPNL RIMMP+ WKGHPLRKDYP Sbjct: 115 SVFPSCNFFEREVFDLFGVRFHGHPNLARIMMPEDWKGHPLRKDYPVEGYR 165 >UniRef50_B9L171 NADH-quinone oxidoreductase n=2 Tax=Thermomicrobia (class) RepID=B9L171_THERP Length = 204 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 63/167 (37%), Positives = 88/167 (52%), Gaps = 9/167 (5%) Query: 11 WQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVM 69 W D P + +R RF PDAF + + R L +V DFL+ P+ Y Sbjct: 22 WGPTDPEQHPAVRLVRERF-PDAFEEATVFRDEMTIRVARPALRDVVDFLRLHPELRYNH 80 Query: 70 LFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPN 129 L D+ +D R F V HL SI R + + +K + + + VP+ +F Sbjct: 81 LTDITAVDLLYLRERP-----RFDVVVHLYSIPRRQRLRVKCGVDDGE-MVPSLVPIFAG 134 Query: 130 ANWYERETWDLFGITFDGHPNLRRIMMPQTW-KGHPLRKDYPARATE 175 ANW ERE +D+FGI F+GHP+LRRI++P+ W +GHPLRKDYP R Sbjct: 135 ANWLERECYDMFGIVFEGHPDLRRILLPEDWDEGHPLRKDYPLRGYR 181 >UniRef50_Q9G4B8 NADH-ubiquinone oxidoreductase n=1 Tax=Thraustochytrium aureum RepID=Q9G4B8_9STRA Length = 194 Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 10/162 (6%) Query: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFL-KKLPKPYVMLFDLHGMDERLRTH 83 L+ G +V+ T + IK+E+LLEV FL K Y +L D+ +D + Sbjct: 8 LQKMLGKSLISVK-IETNSIFLSIKKEKLLEVLVFLAKHTNCNYTILSDITVVDYPKNNN 66 Query: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143 R F + Y+L+S+ N + +K+ ++ VP+ LF NANWYERE +D+FGI Sbjct: 67 R-------FEIIYNLLSLTNNHRLFVKIQTN-SNWFVPSMVTLFSNANWYEREAFDIFGI 118 Query: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAK 185 F GHP+LRRI+ ++GHPLRKD+P F+ K + Sbjct: 119 FFSGHPDLRRILTDYGFEGHPLRKDFPLNGFNEVRFDFEKKR 160 >UniRef50_B3RJ43 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RJ43_TRIAD Length = 269 Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 21/200 (10%) Query: 42 GVPVVWIKREQLLEVGDFLKKLP-KPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLIS 100 + + E L+ FL+ + L D+ +D R +R F + Y+L+S Sbjct: 85 DELELLVYPEALIPTMIFLRNHTNAQFESLVDITAIDVPKREYR-------FELIYNLLS 137 Query: 101 IDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW 160 + N + +K E + + T +FP ANW+ERE WD++G+ F HP+LRRI+ + Sbjct: 138 LRYNSRVRVKTYTDELTP-IESITPIFPGANWFEREVWDMYGVYFANHPDLRRILTDYGF 196 Query: 161 KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNH 220 GHP RKD+P T+ + D E++ + +P E+ E F Sbjct: 197 DGHPQRKDFPLSG-------YTELRYDDELKRIVSEPVEFA----QEFRKFDLETPWEQF 245 Query: 221 PSAHGAFRIVLQLDGEEIVD 240 P+ R L+ GEEI + Sbjct: 246 PAYREENRASLE-AGEEIKE 264 >UniRef50_Q2S5J1 NADH-quinone oxidoreductase n=3 Tax=Rhodothermaceae RepID=Q2S5J1_SALRD Length = 234 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 10/189 (5%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 VI LR FG V+ +++++ ++ EV FLK+ + + DL G+D Sbjct: 48 VIDALREEFGAAVLDVERYA-NEDTIYVEKNRIREVCRFLKE-EEGFDYFVDLGGIDNFT 105 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 + VFY+L+S +R + + LKV + E D+ VP+ T+++ ANW ERE +D+ Sbjct: 106 -------AEDRYEVFYNLVSTERQKRLRLKVQVDEGDMQVPSVTEVYRAANWNEREAYDM 158 Query: 141 FGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS-PFELTKAKQDLEMEALTFKPEE 199 FG +F HP+ RR+ MP+ + HPLRK++P S P DL M+ Sbjct: 159 FGFSFVDHPDPRRMYMPEDFDYHPLRKEFPQLGIPGSLPLPPQTPDGDLTMDPFAAAHGS 218 Query: 200 WGMKRGTEN 208 +K E Sbjct: 219 QPVKSYEEP 227 >UniRef50_A8LIT7 NADH-quinone oxidoreductase subunit C n=51 Tax=Alphaproteobacteria RepID=NUOC_DINSH Length = 215 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 9/183 (4%) Query: 31 PDAFTVQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMDERLRTHREGLPA 89 PD V ++ + FLK + L D+ +D R R Sbjct: 26 PDCVISTEIAHDELTVVATPNSIVGLVAFLKTDATCKFSTLIDITAVDYPERAQR----- 80 Query: 90 ADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 F V YH +S+ +N I ++V + E+D VP+ P+ANW+ERE +D+FGI F GHP Sbjct: 81 --FDVVYHFLSMYQNHRIRIRVPVREDD-IVPSIISEHPSANWFEREVFDMFGILFSGHP 137 Query: 150 NLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENE 209 +LRRI+ ++G+PLRKD+P ++ K + E L + ++ E Sbjct: 138 DLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEEKKRVVYEPVNLVQEYRQFDFMSPWEGA 197 Query: 210 DFM 212 +++ Sbjct: 198 EYI 200 >UniRef50_B3DXN6 NADH-quinone oxidoreductase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXN6_METI4 Length = 213 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 10/190 (5%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDER 79 P+ E++ F V+ R G + + + +V +LK+ K + +L D+ G+D Sbjct: 7 PLAEEIQKVFSIKLLEVKEFR-GEWTLVMDLSIIQQVARYLKE-EKGFGLLLDISGVDH- 63 Query: 80 LRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWD 139 F V YH ++ + + +K ++E + VPT + ++P ANW+ERE +D Sbjct: 64 ------WGEEPRFEVVYHFYNLQKATLLRVKGRVSEANPIVPTLSFIYPTANWHEREAYD 117 Query: 140 LFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEE 199 +FGI F+GHP+LRRI+M + + +PLRKD+P E + AK ++ F Sbjct: 118 MFGIIFEGHPDLRRILMWEGYPYYPLRKDFPVEGKETDQSPVAFAK-PAPLDGGPFVSRP 176 Query: 200 WGMKRGTENE 209 + E Sbjct: 177 AKLSVEREPR 186 >UniRef50_D0LPX5 NADH-quinone oxidoreductase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX5_HALO1 Length = 163 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 62/161 (38%), Positives = 83/161 (51%), Gaps = 15/161 (9%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFD----LH 74 + L +FG DA ++ G V +KRE+L+EV +L+ P M FD Sbjct: 3 QKTLDALTKKFG-DAIEATSSDCGDEVAVVKREKLVEVAQWLRDDPA---MAFDSPVFCT 58 Query: 75 GMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYE 134 +D R F V Y L S+ I LKV LAE D PT TKL+P +W E Sbjct: 59 CIDNLGEEPR-------FEVCYQLRSMKLRHRIRLKVRLAEEDPVCPTLTKLWPGFDWQE 111 Query: 135 RETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATE 175 RET+D++GI F H +LRRI M + + G+PLRKDYP + Sbjct: 112 RETYDMYGIEFKDHHDLRRIYMYEEFVGYPLRKDYPKEKRQ 152 >UniRef50_C0Z771 NADH-quinone oxidoreductase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z771_BREBN Length = 424 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 14/171 (8%) Query: 9 PAWQTRDHLDDPVIGELRNRFGPDAFT---VQATRTGVPVVWIKREQLLEVGDFLKKLPK 65 A D + + FG + + VP + I+ E+ +V FL+ + Sbjct: 263 KAPSKNQPYLDKYVSRISEAFGQEVIEASYINELGKEVPTLTIQNERWHQVAQFLRDDEQ 322 Query: 66 -PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFT 124 + L DLHG+D V+YH S + + +KV + + V + Sbjct: 323 LSFEYLSDLHGVDY----------EDRLEVYYHFYSYKNRQSLAVKVKTSREESKVASVM 372 Query: 125 KLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATE 175 L+ ANW ERET+DL GI F GH +LRRI++P W G+PLRKDY E Sbjct: 373 DLWHGANWNERETFDLLGIHFPGHKDLRRILLPDDWVGYPLRKDYVQYDEE 423 >UniRef50_B4UIA3 NADH-quinone oxidoreductase n=4 Tax=Anaeromyxobacter RepID=B4UIA3_ANASK Length = 196 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 79/156 (50%), Gaps = 10/156 (6%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMD 77 + L+ RFG D + + V +K E+++EV FL P L DL +D Sbjct: 4 HEIHERLKARFGDDVGPLSEPKIDAFCV-VKAERIVEVSRFLATEPGLEMDFLEDLTAVD 62 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERET 137 R E V YHL+S I+LKV VPT ++ ANW+ERE Sbjct: 63 WPKRNVIE--------VVYHLLSYRHRHSIVLKVEADRAAPVVPTVEGVWKTANWFEREV 114 Query: 138 WDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARA 173 +DLFG++F GHP+LRR+M+P W GHPLRKDY Sbjct: 115 YDLFGVSFPGHPDLRRLMLPDDWVGHPLRKDYQEAG 150 >UniRef50_A6FCN4 NADH-quinone oxidoreductase n=1 Tax=Moritella sp. PE36 RepID=A6FCN4_9GAMM Length = 180 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 10/171 (5%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERL 80 + +L + F ++ +P V + + L+E+ FL+ + + D+ G+D Sbjct: 9 LNQLIDSFNGR-ISIDPNVIDMPCVVVSPKDLVELCLFLRDDDAFKFNFMADIGGIDFHP 67 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 T R + + YHL SI + +K L ++ PT T L+ ANW+ERE +D+ Sbjct: 68 NTPR-------YQLVYHLYSISLGWRLRIKCPL-KDPPKAPTITHLWTTANWHEREAYDM 119 Query: 141 FGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEME 191 FGI F+GHP+LRRI M Q ++G P+RKD+P R + + K Sbjct: 120 FGIVFEGHPDLRRIYMWQEFEGWPMRKDFPLRGYKDKYNPFGEEKPGATPP 170 >UniRef50_A0LDS5 NADH-quinone oxidoreductase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDS5_MAGSM Length = 187 Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 37 QATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVF 95 + G VVW EQ+++ ++ P + + D+ + R F V Sbjct: 22 REWVCGALVVWCDPEQVVDTLRTMRDDPGMNFKLFIDVTAVHYPKR-------EKPFEVV 74 Query: 96 YHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIM 155 Y L+S+ +N I +K + + VP+ T L+ A+W+ERE +++FGI GHP+LRR++ Sbjct: 75 YQLLSVHKNHRIRVKTLVDADTP-VPSITGLWKAADWFEREMYEMFGILISGHPDLRRLL 133 Query: 156 MPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTEN 208 + + G PLRKD+P ++ T+ + E +LT + E Sbjct: 134 LDYDFDGFPLRKDFPVTGPFELRYDETQQRIVREPVSLTVPNRNFYSNATGEQ 186 >UniRef50_UPI0000D52FC7 NADH Dehydrogenase I Chain C n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52FC7 Length = 163 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 51/163 (31%), Positives = 91/163 (55%), Gaps = 4/163 (2%) Query: 24 ELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGMDERLRT 82 EL N++ T++G+ + +K+E +LE+ +K+ Y L D+ +D L Sbjct: 4 ELINKYSVGEIQF-PTKSGLLSMLVKKELVLEIIQKIKEDDNSLYDQLIDITVIDNVLSN 62 Query: 83 HREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFG 142 + +++ Y +S+ N+ +++ ++E+D + + T++F +ANW+ERE +DLFG Sbjct: 63 --QNYSNQRYTIVYSFLSLSFNKRLLVYSNVSEDDQSIDSITQIFESANWFEREIYDLFG 120 Query: 143 ITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAK 185 I F HPNL+RIM ++GHPLRKD+P E ++ K Sbjct: 121 IAFKNHPNLQRIMNDYNFQGHPLRKDFPLTGYEEVRYDENLKK 163 >UniRef50_B4UIA8 NADH (Or F420H2) dehydrogenase, subunit C n=4 Tax=Anaeromyxobacter RepID=B4UIA8_ANASK Length = 175 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 9/168 (5%) Query: 17 LDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHG 75 + VI L RF G +++R ++++V FLK+ P + M + Sbjct: 1 MSKAVIAALVERFPDAVHAPYEGVGGDDCAFVERSRIVDVCRFLKEDPSLAFNMSPYITA 60 Query: 76 MDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEN-DLHVPTFTKLFPNANWYE 134 +D + R F V Y+L+S N + L+V + E + VP+ T L+ A+W+E Sbjct: 61 VDYLGASPR-------FEVVYNLLSTVHNTRVRLRVKVPEGPEGVVPSVTGLWRGADWFE 113 Query: 135 RETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELT 182 R WD++GI F GHP++RR++M ++GHPLRKDYP R + E Sbjct: 114 RYCWDMYGIPFSGHPDMRRLLMYDEFEGHPLRKDYPLRGRQPLVVERE 161 >UniRef50_A8M620 NADH-quinone oxidoreductase subunit C n=14 Tax=Actinomycetales RepID=NUOC_SALAI Length = 245 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 9/192 (4%) Query: 4 LTAQEPAWQTRDHLDDPVIGELRNRFG--PDAFTVQATRTGVPVVWIKREQLLEVGDFLK 61 + E A + D V L + +A G + I+ E++ EV L+ Sbjct: 59 QRSIEAASRPYGGYFDEVADALEEAYPAFGEAIEKVVVDRGELTLHIRPERIAEVCQVLR 118 Query: 62 KLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHV 120 + + + G+D G A Y L S+ R I L+ A++ D H+ Sbjct: 119 DDLALRFELCSSVSGVDYL------GADARRLHAVYQLTSMTYRRQIRLEAAVSVEDPHL 172 Query: 121 PTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE 180 P+ T ++P A+W ERE +D+FGI FDGHP L RI+MP W+GHP RKDYP Sbjct: 173 PSVTGVYPTADWQEREAYDMFGIVFDGHPGLTRILMPDDWEGHPQRKDYPLGGVPVEYKG 232 Query: 181 LTKAKQDLEMEA 192 D Sbjct: 233 AEIPPPDRRRSY 244 >UniRef50_A8XGA9 C. briggsae CBR-NUO-2 protein n=2 Tax=Caenorhabditis RepID=A8XGA9_CAEBR Length = 399 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 23/213 (10%) Query: 2 TDLTAQEPAWQTRDHLDDPVIGELRN--RFGPDAFT-----VQATRTGVPVVWIKREQLL 54 + P T +D+ L N ++ + VQ + I ++ Sbjct: 164 IETKTDAPKKPTIWKIDEKKRERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVV 223 Query: 55 EVGDFLK-KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVAL 113 V FLK + L + GMD R +R V Y L S+ N + ++ Sbjct: 224 PVLSFLKGNHSAQFTNLTFITGMDVPTRKNR-------LEVIYALYSVRFNARVRVRTYT 276 Query: 114 AENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARA 173 E + + T +F A+WYERE +D++G+ F+ HP+LRRI+ ++GHP RKDYP Sbjct: 277 DEIAP-IDSVTPVFKGADWYEREVYDMYGVWFNNHPDLRRILTDYGFEGHPFRKDYPLSG 335 Query: 174 TEFSPFELTKAKQDLEMEALTFKPEEWGMKRGT 206 + + D E++ + ++P E + Sbjct: 336 -------YNEVRYDPELKRVVYEPSEMAQEFRK 361 >UniRef50_A9GUY8 NADH-quinone oxidoreductase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GUY8_SORC5 Length = 217 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 11/178 (6%) Query: 17 LDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHG 75 + V+ L +F + G + + FL+ P+ M DL Sbjct: 1 MSKKVLELLTAQFPGAVLETHSQF-GDDTAVLDPAVWRDAALFLRNDPRTLMNMFVDLTA 59 Query: 76 MDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDL---HVPTFTKLFPNANW 132 +D R F V HL S++RN I +K + + + + + ++ ANW Sbjct: 60 VDYLWRGDVP-----RFEVVCHLRSLERNHRIRIKARVGDEEGNGAEIDSIVPVWKGANW 114 Query: 133 YERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARA-TEFSPFELTKAKQDLE 189 +ERE +DL GI F GHP+LRRI+M ++GHPLRKDYPA PF L Sbjct: 115 FERECYDLLGIVFKGHPDLRRILMYPEFEGHPLRKDYPANRIQPLIPFRDVPNTGKLP 172 >UniRef50_Q11XR7 NADH-quinone oxidoreductase n=4 Tax=Sphingobacteriales RepID=Q11XR7_CYTH3 Length = 168 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 13/162 (8%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPY-VMLFDLHGMD 77 + + RFG A T + P + +++ L ++ FL+ + + L L G+D Sbjct: 6 QDIKAAIAERFGEAAITGEQAALAQPQLLVQKAFLKDICFFLRDDERFFFDQLSCLTGLD 65 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEND-----LHVPTFTKLFPNANW 132 G V YHL SI + +++KV D +P+ +++ A+W Sbjct: 66 N-------GPVKNTVEVIYHLYSIPFHLFLVIKVEAERGDGKDILPEIPSVEQVWRTADW 118 Query: 133 YERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARAT 174 +ERE +DL+GI F GHP+LRRI++P W+G+PLRKDY + Sbjct: 119 HEREAFDLYGIRFSGHPDLRRILLPADWEGYPLRKDYTEQEY 160 >UniRef50_B9S1B1 NADH-plastoquinone oxidoreductase 49 kD subunit, putative n=1 Tax=Ricinus communis RepID=B9S1B1_RICCO Length = 421 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 59/182 (32%) Query: 306 LSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA 365 + EL RI SHLL++ F+ D+GA TP F+ F +R+ +YDL EA T Sbjct: 1 MLELSRIASHLLWLGPFMADIGAQTPFFYNFRERELVYDLFEAAT--------------- 45 Query: 366 HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGL 425 R +GV GA+EA+ WG +G L Sbjct: 46 ------------------------------------ERVEGVGIVGAEEAINWGLSGPML 69 Query: 426 RATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP 485 RA+G+ +D+R+ Y Y+ FD+E+ D R +++ + L + L+N P Sbjct: 70 RASGVQWDLRQVDHYECYDEFDWEVQ-WQKEGDSLARYLVR-------IVFLNKFLDNKP 121 Query: 486 EG 487 +G Sbjct: 122 KG 123 >UniRef50_D1RAG7 NADH-quinone oxidoreductase n=2 Tax=Parachlamydiaceae RepID=D1RAG7_9CHLA Length = 173 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 12/156 (7%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDER 79 I L+N P+A Q G + +++E L++V +LK Y +L DL G+D Sbjct: 5 EAIENLKNH-CPEAILAQKQFLGETTLEVQKENLIKVLSYLKHD---YEVLMDLTGVDYV 60 Query: 80 LRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWD 139 T V Y L + I + V + + +P+ T L+ A WYERE +D Sbjct: 61 DPTPYT-------KVVYWLHNPKNFERIRVIVFVEREEP-IPSVTCLWDGAAWYERELFD 112 Query: 140 LFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATE 175 LFG+ +GHP+L+RI+MP WKGHPLR+DYP Sbjct: 113 LFGVPIEGHPDLKRILMPDDWKGHPLRRDYPLTEQP 148 >UniRef50_A9KBK6 NADH-quinone oxidoreductase subunit C n=7 Tax=Coxiellaceae RepID=NUOC_COXBN Length = 227 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 26/193 (13%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLP-KPYVMLFDLHGM 76 +I + +RF V + + + LLEV L+ P + +L D+ G+ Sbjct: 4 KQTLIDAINDRFNSQIEAV-VAGVDMVTIELLPTHLLEVCTALRDDPPFNFELLLDVCGV 62 Query: 77 DERLRTHREGLPAA------------------------DFSVFYHLISIDRNRDIMLKVA 112 D F+V YHL+S+ N I LK Sbjct: 63 DYLEYGMSPWRTEETPNTGFSRGFEEVIQEQIIPWNKPRFAVVYHLLSLRHNHRIRLKTY 122 Query: 113 LAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPAR 172 + + VP+ K++ +A+WYERE +DL+GI F+GHP+LRR++ + GHP RKD+P Sbjct: 123 VEGDPPLVPSVIKIWSSADWYEREAFDLYGIVFEGHPDLRRLLTDYGFVGHPFRKDFPLI 182 Query: 173 ATEFSPFELTKAK 185 ++ + + Sbjct: 183 GEVELRYDAAQQR 195 >UniRef50_P34944 NADH-ubiquinone oxidoreductase 27 kDa subunit n=97 Tax=Embryophyta RepID=NDUS3_MARPO Length = 195 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 9/156 (5%) Query: 31 PDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPA 89 P T +++ L ++ FLK + +L D+ G+D R R Sbjct: 15 PKWIHKCQTSKHENILYTNPNSLFQLLYFLKYHTNTRFKVLIDICGVDYPSRKRR----- 69 Query: 90 ADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 F V Y+L+SID N I + ++ E + + +FP+A W+ERETWD+FG+ F HP Sbjct: 70 --FEVVYNLLSIDYNTRIRILTSVDEITP-ICSVVSIFPSAGWWERETWDMFGVYFSNHP 126 Query: 150 NLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAK 185 +LRRI+ ++GHPLRKD+P ++ ++ + Sbjct: 127 DLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKR 162 >UniRef50_O75489 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial n=75 Tax=cellular organisms RepID=NDUS3_HUMAN Length = 264 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 16/185 (8%) Query: 23 GELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLP-KPYVMLFDLHGMDERLR 81 + VQ + V I + ++ V FL+ + L DL +D R Sbjct: 63 EYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTR 122 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 +R F + Y+L+S+ N I +K E + + +F ANWYERE WD+F Sbjct: 123 QNR-------FEIVYNLLSLRFNSRIRVKTYTDELTP-IESAVSVFKAANWYEREIWDMF 174 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWG 201 G+ F HP+LRRI+ ++GHP RKD+P + + D E++ + +P E Sbjct: 175 GVFFANHPDLRRILTDYGFEGHPFRKDFPLSG-------YVELRYDDEVKRVVAEPVELA 227 Query: 202 MKRGT 206 + Sbjct: 228 QEFRK 232 >UniRef50_C1ZK67 NADH-quinone oxidoreductase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZK67_PLALI Length = 179 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 12/157 (7%) Query: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDE-RLRT 82 L + + + TG + +K L + L+ + +L DL +D Sbjct: 11 LEQQLPGGSVRLVEAATGDSWIELKSHALRQACQILRDHQDCQFNVLSDLTAVDWFSPAG 70 Query: 83 HREGLPAADFSVFYHLISIDRNRDIMLKVALAEND----------LHVPTFTKLFPNANW 132 + + F V YHL+S+ R + + LKV L +P+ L+ ANW Sbjct: 71 KKPVIADPRFEVVYHLLSLSRRQTLTLKVILPRPGGDELSKDAELPEIPSIADLWLAANW 130 Query: 133 YERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDY 169 +ERE +D+FGI F GHP+LRRI+ P+ W+G+PLRKDY Sbjct: 131 HEREAFDMFGIRFKGHPDLRRILCPEDWEGYPLRKDY 167 >UniRef50_Q1V2T1 NADH-quinone oxidoreductase n=4 Tax=Bacteria RepID=Q1V2T1_PELUB Length = 202 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 9/149 (6%) Query: 38 ATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVFY 96 R + I E L++V F+K + L D+ +D R F V Y Sbjct: 23 EIRHEQLYINIDNEDLIDVTLFIKSNENTKFRQLIDITVVDYPENAQR-------FKVVY 75 Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 +S + N+ I+L ++EN+ +P+ T ++P ANW ERE +D++G+ F HP++RRI+ Sbjct: 76 LFLSHEFNQRIILSYLISENE-VIPSLTPIYPAANWMEREVFDMYGVKFKDHPDMRRILT 134 Query: 157 PQTWKGHPLRKDYPARATEFSPFELTKAK 185 ++GHPLRKD+P + + K Sbjct: 135 DYGFEGHPLRKDFPLTGHTEVRYSEDQKK 163 >UniRef50_B2UPT7 NADH-quinone oxidoreductase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UPT7_AKKM8 Length = 194 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 9/150 (6%) Query: 26 RNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHRE 85 +NRFG D T + G + + R+ + +V +L+ + ML +L +D + R Sbjct: 16 QNRFGKDIITDRYEFRGDITLTVARQAVADVVRWLRD-SAGFDMLVNLSSVDNMGESPR- 73 Query: 86 GLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITF 145 F V Y L + ++ LK + + + VP+ T++F +ANW+ERE WDL GI F Sbjct: 74 ------FEVNYTLTQSETGANLSLKTKVDDGE-EVPSVTEIFQSANWHEREAWDLMGIKF 126 Query: 146 DGHPNLRRIMMPQTWKGHPLRKDYPARATE 175 GHP+LRRI+M + + PLRKD+P + Sbjct: 127 SGHPDLRRILMWEGYPYFPLRKDFPVQGVP 156 >UniRef50_A3ERJ5 NADH-quinone oxidoreductase n=3 Tax=Leptospirillum RepID=A3ERJ5_9BACT Length = 184 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMD 77 PV L RF + + G V+I+ E L+V L P+ Y + D+ +D Sbjct: 2 HPVAESLEKRFSGTFLGSRES-LGDLSVYIRPENALDVFRALHDEPEYDYDYIVDVTSVD 60 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERET 137 + R F V Y L SI R +M+K+ + E+ V + ++ A + ERE Sbjct: 61 YPMDPER-------FEVVYILYSISRRHRVMVKIRVTEDSPVVDSVVGIWKGAEFMEREV 113 Query: 138 WDLFGITFDGHPNLRRIMMPQTW-KGHPLRKDYP 170 +D+ GI F GHP+LRRI+MP + +G PLRKD+P Sbjct: 114 YDMMGIQFRGHPDLRRILMPDDYEEGFPLRKDFP 147 >UniRef50_Q2RU38 NADH-quinone oxidoreductase subunit C n=18 Tax=Alphaproteobacteria RepID=NUOC_RHORT Length = 213 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 10/213 (4%) Query: 7 QEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK- 65 ++ R + + D V+ V +R + +V FL+ Sbjct: 1 MTSVFEERVESLKELGARIEAALPTDVVRVE-MAKDELQVIAQRPSIAKVLTFLRDDSAC 59 Query: 66 PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTK 125 + L D+ G+D R R F V Y+++S+ N+ I +K++ +E+ VP+ T+ Sbjct: 60 RFSQLVDIAGVDYPSREER-------FEVVYNMLSMHHNQRIRVKISASEDTP-VPSVTR 111 Query: 126 LFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAK 185 +F +ANW+ERE WD++GI F HP+LRR++ ++GH RKD+P + ++ + Sbjct: 112 VFSSANWFEREAWDMYGIFFSEHPDLRRLLSDYGFEGHAQRKDFPLTGYKEVRYDEELKR 171 Query: 186 QDLEMEALTFKPEEWGMKRGTENEDFMFLNLGP 218 E L+ + E D + P Sbjct: 172 VVYEPVRLSQDFRTFDFLSPWEGMDRQIRRVLP 204 >UniRef50_C1F9E1 NADH-quinone oxidoreductase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9E1_ACIC5 Length = 159 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 9/161 (5%) Query: 15 DHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLH 74 + L D + P T + I R+ + + ++ Y D Sbjct: 8 EALKDNSAIQALESAAPGVITGAKYDRNELTLTIARDSIRRACEIVRA--AGYNFFSDCT 65 Query: 75 GMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYE 134 +D F V YHL+S + + L V + +D V + T ++P AN+YE Sbjct: 66 CVDWYP-------SEPRFQVTYHLLSHRLKQRVRLCVMVDSSDPSVESITSIWPAANYYE 118 Query: 135 RETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATE 175 RE WDLFG+ F GHP+LRRIMMP+ W+GHPL+K YP Sbjct: 119 REVWDLFGVRFHGHPDLRRIMMPEEWEGHPLQKTYPVEGYR 159 >UniRef50_B3CSH0 NADH-quinone oxidoreductase n=2 Tax=Orientia tsutsugamushi RepID=B3CSH0_ORITI Length = 196 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 16/191 (8%) Query: 16 HLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLH 74 H + + ++F + + + T I +EQL+EV LK + + +L D+ Sbjct: 4 HHLKELKELVESQFAISSISAKFNITNHVEAIIHKEQLIEVLKLLKNDKELKFTILTDIF 63 Query: 75 GMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYE 134 D R R F + Y+L+SI +N +++K+ L +N+L + + T +F NANWYE Sbjct: 64 AADFPDRNKR-------FEIVYNLLSIIKNIRLIVKINLNDNEL-IQSATPVFSNANWYE 115 Query: 135 RETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALT 194 RE +DLFGI F HP+L+RI+ + GHPLRKD+ ++ K D ++E + Sbjct: 116 REIYDLFGIKFANHPHLKRILTDYGFVGHPLRKDFALSG-------YSQVKYDDKLEKVV 168 Query: 195 FKPEEWGMKRG 205 ++P + + Sbjct: 169 YEPVKLDQEYR 179 >UniRef50_B5I9E7 Ni Fe-hydrogenase III large subunit-like protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9E7_9EURY Length = 412 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 69/371 (18%), Positives = 103/371 (27%), Gaps = 57/371 (15%) Query: 229 IVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVE 288 + GE I VP +G+ R + +PY +RI + V Sbjct: 89 FKIATCGERIDSLVPYLGFKKREMLNKAIGKEPWEALPYVERITGQFSISYASLFYGLV- 147 Query: 289 KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEA 348 GI PD + + EL R+++H+ + D ++ L Sbjct: 148 --FGIDCPD---YL-LFAKELERVHNHIWVMHKLAGDASQKVANMHLAAITEEFLRLNLK 201 Query: 349 ITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVA 408 G R + R G E L + K + + I R Q Sbjct: 202 TLGHRYGMNFLRTG-------PRKYDKFHENLSELKKWFLETAEELSDSRIFIDRLQTTC 254 Query: 409 AYGAKEALEWGTTGAGLRATGIDFDVRK----ARPYSGYENFDFEIPVGGGVSDCYTRVM 464 + L G RA+G+ D RK Y Y P D +R + Sbjct: 255 ILKKLDILRNDGVGIPARASGVLRDARKIGIFKDLYGDYS------PPMESYGDSLSRFL 308 Query: 465 LKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVM 524 ++V+E+ +S ILE I Sbjct: 309 IRVKEVEKSFEILE--------------------------------SIELKECKVKRNAK 336 Query: 525 PANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYL 584 M EA G Y +R PS IRG++ +D L Sbjct: 337 KDGFYEGMAEAPPGDI-YMGVKIEKGRVREIIIRPPSLVMYHAFSVGIRGNVFTDFPFAL 395 Query: 585 GSIDFVMSDVD 595 S SD D Sbjct: 396 DSFGAYFSDAD 406 >UniRef50_D2QGQ3 NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGQ3_9SPHI Length = 166 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 8/154 (5%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGM 76 ++ V + N+FG + R+Q++ + FLK+ P L D+ + Sbjct: 4 NEEVAQIILNQFGETVTDFDDPY-DLLTCSTSRDQIVSLVKFLKEHPTLQISFLTDITAI 62 Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 H +F V YHL S+ +N I +KV L +DLH+PT LF ANW ERE Sbjct: 63 ------HYPDSAGKEFCVVYHLHSLTKNFRIRIKVYLTTDDLHIPTLIPLFAGANWMERE 116 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 T+DLFGI FDGHP+LRRI+ + HP+RK+YP Sbjct: 117 TFDLFGILFDGHPDLRRILNMEEMDYHPMRKEYP 150 >UniRef50_C6W0T5 NADH-quinone oxidoreductase n=2 Tax=Flexibacteraceae RepID=C6W0T5_DYAFD Length = 180 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPY-VMLFDLHGMD 77 + + RF P+ V TR P + + + + FL + + Y L + +D Sbjct: 4 QEITDIVTGRF-PEYTIVPDTRNPQPALMVPAAGIAAICSFLHEDERLYFDFLACITAID 62 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEND-----LHVPTFTKLFPNANW 132 G A + Y+L SI D+ LK N +PT + ++ A+W Sbjct: 63 N-------GAAADSMELIYNLTSIPYGIDLTLKTVFPRNTEGVALPSIPTVSHIWRTADW 115 Query: 133 YERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEA 192 +ERE +DL GI F+GHP+LRRI++P+ W+GHPLRKDY A+ + + LE Sbjct: 116 HEREAYDLIGIRFEGHPDLRRILLPEDWEGHPLRKDYDAQERYHGIYVRYEDGPTLEPGN 175 >UniRef50_Q02CU1 NADH-quinone oxidoreductase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CU1_SOLUE Length = 157 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 8/134 (5%) Query: 42 GVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISI 101 G + I ++ + FLK + +V + + +D F + YHL SI Sbjct: 31 GELTLEIAVPKIASICGFLKYD-QKFVRVSTVTAVDRYP-------AEPRFEIVYHLHSI 82 Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 +RN+ + LK L D + + T ++ A WYERE +DLFG+ F HP+LRRI+MP W+ Sbjct: 83 ERNQRVRLKALLPGADPVIESVTGVWRGAGWYEREVFDLFGVRFLNHPDLRRILMPDDWE 142 Query: 162 GHPLRKDYPARATE 175 G+PLRKDYP T Sbjct: 143 GYPLRKDYPVTGTR 156 >UniRef50_Q04YA6 NADH dehydrogenase (Ubiquinone), C chain n=6 Tax=Leptospira RepID=Q04YA6_LEPBL Length = 177 Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 9/159 (5%) Query: 17 LDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHG 75 + + V L+ +F + + VPV ++K E ++ V + LK P Y L DL Sbjct: 1 MKEEVERFLKEKFPHFLDVQEPVISNVPVFYLKAEGIVPVLNALKGHPTLNYNFLNDLTA 60 Query: 76 MDERLRTHREGLPAADFSVFYHLISIDRNRD-IMLKVALAENDLHVPTFTKLFPNANWYE 134 +D G F V Y L S +++ I +KV L E+ +P+ T ++ ANW E Sbjct: 61 VDWL------GKKEPRFEVNYLLRSANQSSSKIRIKVRL-EDGEAIPSVTNVYKGANWPE 113 Query: 135 RETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARA 173 RE +DLFGI+F GHPNL RI+MP ++GHPLRKD+P Sbjct: 114 REIYDLFGISFIGHPNLDRILMPDNFQGHPLRKDFPLEG 152 >UniRef50_B0TH79 Proton-translocating NADH-ubiquinone oxidoreductase, chain c n=2 Tax=Heliobacteriaceae RepID=B0TH79_HELMI Length = 149 Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 11/142 (7%) Query: 35 TVQATRTGV-PVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADF 92 V+ T GV V + +EQLL V + L++ P + ML DL +D A F Sbjct: 16 EVEVTGEGVSRAVVVPKEQLLAVMEKLRREPDFAFDMLSDLTAVDR---------KDAGF 66 Query: 93 SVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLR 152 V Y L S+ D+ +K A + VP+ T ++P A+W ERE +DL G+TF GHPN+ Sbjct: 67 EVVYQLFSLKHRLDLRVKTRTAAEEAQVPSVTGIWPGADWMEREVFDLMGVTFAGHPNMA 126 Query: 153 RIMMPQTWKGHPLRKDYPARAT 174 R+++P ++GHPLRKD+ + Sbjct: 127 RLLLPDEFEGHPLRKDFKLQPR 148 >UniRef50_C9RJJ7 NADH (Or F420H2) dehydrogenase, subunit C n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJJ7_FIBSS Length = 200 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 8/160 (5%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMD 77 + + L +F D + GV V + L FLK+ + ML D+ G+D Sbjct: 4 EEIFAALEGKF--DVKREPLDKWGVTAV-VAAPYLHNAVQFLKEESGIKFDMLVDIAGID 60 Query: 78 ERLRTHREGLPAADFSVFYHLISIDR-NRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 + EG F+V Y S+ I LKV ++E L VPT + L+ NANWYERE Sbjct: 61 YLTYPNHEG---PRFAVSYAFKSMKNPGARIRLKVLVSEESLKVPTISDLYANANWYERE 117 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEF 176 +D FG+ F+GHP+LRR++ + GHPLRKDYPA+ ++ Sbjct: 118 VYDQFGVIFEGHPDLRRLLNHVEFVGHPLRKDYPAQKRQW 157 >UniRef50_A9II05 NADH-quinone oxidoreductase subunit C n=138 Tax=Proteobacteria RepID=NUOC_BORPD Length = 209 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 20/195 (10%) Query: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERLRTH 83 L+ G D +A G + + +Q L V + L+ + DL G+D + Sbjct: 13 LQAALGADIALTEA--LGELTLEVPADQWLAVCNKLRTDAGLSFETCIDLCGVDYLTWGN 70 Query: 84 REGLPAAD---------FSVFYHLISIDRNRDIMLKVALAEND-LHVPTFTKLFPNANWY 133 D ++V HL+SI N + ++ ++D V + +P NW+ Sbjct: 71 GTRQAGEDKVAGVQRSRYAVVAHLLSIAHNWRLRVRTWAPDDDFPMVGSLIDCWPGVNWF 130 Query: 134 ERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEAL 193 ERE +DLFGI F+GHP+LRRI+ + GHP RKD+P T + + D E + Sbjct: 131 EREAFDLFGIVFEGHPDLRRILTDYGFIGHPFRKDFPLSGT-------VEMRYDPEQRRV 183 Query: 194 TFKPEEWGMKRGTEN 208 ++P + T Sbjct: 184 IYQPVTIDPREITPR 198 >UniRef50_B3ET79 NADH-quinone oxidoreductase n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ET79_AMOA5 Length = 166 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 15/170 (8%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPY-VMLFDLHGMD 77 + ++ L+ + P + + + ++ L++ P Y L + +D Sbjct: 4 EDIVKLLQEKLKPAVNIETDMGATPQAIIVPAAHIAQICQILQENPSMYFDYLACITALD 63 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDL-----HVPTFTKLFPNANW 132 G A V Y+L SI N +M+KV++ N +PT + L+ ANW Sbjct: 64 N-------GFEAGTLEVIYNLYSISYNFQLMIKVSVTRNKPGEPLPSIPTVSHLWQAANW 116 Query: 133 YERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDY--PARATEFSPFE 180 +ERE ++L GI F GHP+LRRI++P W+GHPLR DY PA S +E Sbjct: 117 HEREAYELVGIHFTGHPDLRRILLPVDWEGHPLRTDYVEPASYHGISTYE 166 >UniRef50_B8J1D5 NADH-quinone oxidoreductase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1D5_DESDA Length = 186 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 62/185 (33%), Positives = 93/185 (50%), Gaps = 9/185 (4%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDER 79 + LR F + V+ R G V ++ ++LE+ +L+ + L L G+D Sbjct: 5 EIADRLRGFFPEEVLDVREFR-GQLAVLVRSGRILELLAYLRDVLD-MRHLQALCGVDNS 62 Query: 80 LRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWD 139 R P F V YHL SI + I L+ + + + + + L+ ANW ERETWD Sbjct: 63 RRNEPGLSP---FEVVYHLYSIRQRHGIRLRAMVDDPEEGIDSAVPLWTGANWLERETWD 119 Query: 140 LFGITFDGHPNLRRIMMPQTWKGHPLRKDYPA----RATEFSPFELTKAKQDLEMEALTF 195 L GI F GHP+LRRI++P W+GHPLRK+YP R E K+ E++AL++ Sbjct: 120 LVGIHFRGHPDLRRILLPDDWQGHPLRKEYPVKIPARGHEEWEGLTALRKRAAELDALSW 179 Query: 196 KPEEW 200 + Sbjct: 180 QGGAR 184 >UniRef50_B1ZRT1 NADH-quinone oxidoreductase n=3 Tax=Verrucomicrobia RepID=B1ZRT1_OPITP Length = 209 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 11/158 (6%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 L+ +F P V + +L+ L+ Y +L D+ +D Sbjct: 6 AAAALKQKFPA---VTDRASADHPAVNVAVTELVAALKTLRD-EHGYDVLMDVTAIDW-- 59 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEN-DLHVPTFTKLFPNANWYERETWD 139 + F+V YH+ S + + + A++ P+ L+P ANW+ERE +D Sbjct: 60 ----SETSSPRFTVVYHVYSTTHHDYVRVAADCADDVAPVAPSIVSLWPAANWHERECYD 115 Query: 140 LFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 177 +FGI F+GHP+LRRI+M + + G PLRK++P E + Sbjct: 116 MFGIKFEGHPDLRRILMWEGYPGWPLRKEFPLAGVETA 153 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D2U4G0 NADH-quinone oxidoreductase chain C/D n=1 Tax=Ar... 621 e-176 UniRef50_Q2YAA3 NADH-quinone oxidoreductase subunit C/D n=259 Ta... 595 e-168 UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 ... 591 e-167 UniRef50_D2MJM9 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 587 e-166 UniRef50_Q6MIR5 NADH-quinone oxidoreductase subunit C/D n=1 Tax=... 529 e-148 UniRef50_Q2C5T4 NADH dehydrogenase I, B/C/D subunits n=2 Tax=Pho... 523 e-147 UniRef50_C6NSM4 NADH dehydrogenase I, B/C/D subunits n=1 Tax=Aci... 517 e-145 UniRef50_B6YTW8 Hydrogenase 4, component G or formate hydrogen l... 506 e-141 UniRef50_B2V8J2 NADH-quinone oxidoreductase subunit C/D n=15 Tax... 500 e-140 UniRef50_A0RMD1 NADH-quinone oxidoreductase subunit C/D n=5 Tax=... 487 e-136 UniRef50_A1RWL3 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 486 e-136 UniRef50_B6YWP8 Hydrogenase 4, subunit 5 n=1 Tax=Thermococcus on... 486 e-136 UniRef50_C5A3D4 Formate hydrogenlyase I subunit F (Mhy1F) n=2 Ta... 479 e-133 UniRef50_Q5LH50 NADH-quinone oxidoreductase subunit C/D n=34 Tax... 479 e-133 UniRef50_Q1PZL4 Similar to membrane-bound [NiFe]-hydrogenase-3, ... 478 e-133 UniRef50_B5YKR2 Hydrogenase-4 component G n=1 Tax=Thermodesulfov... 478 e-133 UniRef50_Q2RXM4 NADH-ubiquinone oxidoreductase n=1 Tax=Rhodospir... 471 e-131 UniRef50_P16431 Formate hydrogenlyase subunit 5 n=104 Tax=Bacter... 471 e-131 UniRef50_C9LCY9 NADH dehydrogenase I, C/D subunit n=9 Tax=Bacter... 469 e-130 UniRef50_B7R5K6 Hydrogenase-4 component G n=1 Tax=Thermococcus s... 469 e-130 UniRef50_A1RZ40 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 457 e-127 UniRef50_B0R3U3 NADH dehydrogenase-like complex subunit CD n=16 ... 451 e-125 UniRef50_A1ASR5 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 448 e-124 UniRef50_A3DNE9 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 447 e-124 UniRef50_Q0W2B9 Hydrogenase, large subunit-like protein (HycE-li... 445 e-123 UniRef50_B1ZSF2 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 442 e-122 UniRef50_O75306 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 441 e-122 UniRef50_C8W240 Hydrogenase, large subunit-like protein n=1 Tax=... 437 e-121 UniRef50_P77329 Hydrogenase-4 component G n=130 Tax=Bacteria Rep... 436 e-121 UniRef50_Q2K3U2 NADH-quinone oxidoreductase subunit D 2 n=7 Tax=... 435 e-120 UniRef50_B1ZRT0 NADH-quinone oxidoreductase subunit D 1 n=16 Tax... 435 e-120 UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=A... 434 e-120 UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 ... 433 e-120 UniRef50_Q24ST8 Formate hydrogenlyase subunit 5 n=2 Tax=Desulfit... 432 e-119 UniRef50_A9B4Z7 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=... 429 e-118 UniRef50_Q4P4N9 Putative uncharacterized protein n=1 Tax=Ustilag... 427 e-118 UniRef50_Q2S5J0 NADH-quinone oxidoreductase subunit D n=5 Tax=Ba... 427 e-118 UniRef50_C1XJB2 NADH dehydrogenase subunit D n=1 Tax=Meiothermus... 425 e-117 UniRef50_B5YKI5 NADH-quinone oxidoreductase subunit D 1 n=12 Tax... 423 e-117 UniRef50_B9L172 NADH dehydrogenase I, D subunit n=1 Tax=Thermomi... 423 e-117 UniRef50_D1C6X3 NADH dehydrogenase I, D subunit n=1 Tax=Sphaerob... 422 e-116 UniRef50_Q0W6T4 [NiFe]-hydrogenase, large subunit (EchE-like) n=... 422 e-116 UniRef50_D1Z1Z0 Putative [NiFe]-hydrogenase large subunit n=1 Ta... 422 e-116 UniRef50_C1D0H4 Putative NADH dehydrogenase (Quinone), subunit D... 419 e-115 UniRef50_Q1QP34 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=... 417 e-115 UniRef50_B8I2P5 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 417 e-115 UniRef50_B5YL34 NADH-quinone oxidoreductase subunit D 2 n=1 Tax=... 416 e-115 UniRef50_B1W516 NADH-quinone oxidoreductase subunit D 1 n=24 Tax... 413 e-114 UniRef50_A8A9X2 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 412 e-113 UniRef50_Q6MDR3 NADH-quinone oxidoreductase subunit D n=2 Tax=Pa... 412 e-113 UniRef50_B4SJH6 NADH-quinone oxidoreductase subunit D 1 n=211 Ta... 412 e-113 UniRef50_Q1IS59 NADH-quinone oxidoreductase subunit D 1 n=2 Tax=... 411 e-113 UniRef50_Q2JFL7 NADH-quinone oxidoreductase subunit D n=81 Tax=B... 409 e-112 UniRef50_UPI0001C31275 NADH dehydrogenase I, D subunit n=1 Tax=C... 408 e-112 UniRef50_D2R5G7 NADH dehydrogenase (Quinone) n=2 Tax=Planctomyce... 407 e-112 UniRef50_C9LVK3 Proton-translocating NADH-quinone oxidoreductase... 404 e-111 UniRef50_B2V8R2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 402 e-110 UniRef50_Q7NI12 NAD(P)H-quinone oxidoreductase subunit H 1 n=3 T... 401 e-110 UniRef50_Q979M3 NADH dehydrogenase I chain D n=6 Tax=Thermoplasm... 400 e-109 UniRef50_Q30PI1 NADH-quinone oxidoreductase subunit D n=45 Tax=E... 400 e-109 UniRef50_P56753 NAD(P)H-quinone oxidoreductase subunit H, chloro... 396 e-108 UniRef50_C0Z770 NADH-quinone oxidoreductase chain D n=2 Tax=Baci... 395 e-108 UniRef50_A8VSQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 395 e-108 UniRef50_A7H9V5 NADH-quinone oxidoreductase subunit D 2 n=8 Tax=... 393 e-107 UniRef50_Q67P19 NADH-quinone oxidoreductase subunit D 1 n=1 Tax=... 391 e-107 UniRef50_Q2RJU4 NADH-quinone oxidoreductase subunit D n=94 Tax=F... 391 e-107 UniRef50_A5UXK3 NADH-quinone oxidoreductase subunit D 1 n=20 Tax... 390 e-107 UniRef50_UPI00016C492D NADH dehydrogenase subunit D n=1 Tax=Gemm... 390 e-107 UniRef50_D2PDB9 NADH dehydrogenase (Ubiquinone) n=10 Tax=Sulfolo... 389 e-106 UniRef50_A1ALP2 NADH-quinone oxidoreductase subunit D n=1 Tax=Pe... 388 e-106 UniRef50_C6X0Z4 NADH-ubiquinone oxidoreductase chain D n=1 Tax=F... 387 e-106 UniRef50_A5FKI7 NADH-quinone oxidoreductase subunit D n=17 Tax=B... 387 e-106 UniRef50_B9L625 NADH-ubiquinone oxidoreductase n=3 Tax=Epsilonpr... 386 e-105 UniRef50_A1AUU6 Ech hydrogenase subunit E n=3 Tax=Bacteria RepID... 384 e-105 UniRef50_D2LAG1 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 382 e-104 UniRef50_B8DS05 NADH dehydrogenase (Quinone) n=7 Tax=Deltaproteo... 381 e-104 UniRef50_B5Y915 EchE n=1 Tax=Coprothermobacter proteolyticus DSM... 380 e-104 UniRef50_C1AB36 NADH-quinone oxidoreductase chain D n=1 Tax=Gemm... 379 e-103 UniRef50_B3VS74 NADH-ubiquinone oxidoreductase chain 49kDa n=4 T... 378 e-103 UniRef50_C5CEV3 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 375 e-102 UniRef50_Q1AVI6 NADH-quinone oxidoreductase subunit D n=1 Tax=Ru... 375 e-102 UniRef50_Q609T9 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 374 e-102 UniRef50_Q8U0Z6 Mbh12 membrane bound hydrogenase alpha (NADH deh... 374 e-102 UniRef50_C7NUN7 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus... 372 e-101 UniRef50_P31895 Carbon monoxide-induced hydrogenase n=14 Tax=Bac... 372 e-101 UniRef50_C2BU22 NADH dehydrogenase (Quinone) n=4 Tax=cellular or... 372 e-101 UniRef50_B6YU98 Membrane bound hydrogenase, NiFe-hydrogenase lar... 372 e-101 UniRef50_A7I7D0 NADH dehydrogenase (Ubiquinone), 30 kDa subunit ... 372 e-101 UniRef50_C0QBF7 HyfG n=3 Tax=Bacteria RepID=C0QBF7_DESAH 371 e-101 UniRef50_A1RZ50 NADH dehydrogenase (Ubiquinone) n=6 Tax=Archaea ... 370 e-101 UniRef50_B5IS38 Respiratory-chain NADH dehydrogenase, 49 Kd subu... 370 e-100 UniRef50_A0B812 F420H2 dehydrogenase subunit C n=6 Tax=Archaea R... 370 e-100 UniRef50_B1ZUJ2 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=... 368 e-100 UniRef50_Q2FTW4 Membrane bound hydrogenase subunit mbhL n=3 Tax=... 367 e-100 UniRef50_C6A3Z3 Membrane-bound hydrogenase MBH 2, subunit Mbh2L ... 365 2e-99 UniRef50_B2HHH7 Formate hydrogenase HycE n=3 Tax=Actinomycetales... 365 4e-99 UniRef50_B3DZF5 Formate hydrogenlyase subunit 5 n=8 Tax=Bacteria... 364 4e-99 UniRef50_A9G9T3 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=... 364 7e-99 UniRef50_C6A407 Membrane-bound hydrogenase MBH 1, subunit Mbh1L ... 363 9e-99 UniRef50_Q3ZW31 Hydrogenase, group 4, HycE subunit n=3 Tax=Dehal... 362 2e-98 UniRef50_A8MBT0 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga ... 362 2e-98 UniRef50_Q0F384 Hydrogenase subunit n=1 Tax=Mariprofundus ferroo... 361 4e-98 UniRef50_Q6APF2 Related to hydrogenase, component E-formate hydr... 359 2e-97 UniRef50_D2R4P3 NADH dehydrogenase (Quinone) n=3 Tax=Planctomyce... 359 2e-97 UniRef50_A3ZL03 NADH dehydrogenase (Ubiquinone) n=1 Tax=Blastopi... 357 8e-97 UniRef50_B3E6C1 NADH-ubiquinone oxidoreductase chain 49kDa n=2 T... 357 8e-97 UniRef50_A5GBN1 Ech hydrogenase subunit E n=20 Tax=cellular orga... 357 1e-96 UniRef50_A6LMC4 NADH-quinone oxidoreductase subunit D n=14 Tax=c... 356 1e-96 UniRef50_C9RKY1 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 355 2e-96 UniRef50_P15689 NADH-ubiquinone oxidoreductase 49 kDa subunit n=... 355 2e-96 UniRef50_B8IYV5 NAD-dependent dehydrogenase subunit n=1 Tax=Desu... 354 7e-96 UniRef50_Q0W3I1 Ech hydrogenase, subunit E n=2 Tax=Euryarchaeota... 352 3e-95 UniRef50_C8XAS3 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 352 3e-95 UniRef50_C7N626 Ech hydrogenase subunit E n=25 Tax=cellular orga... 352 3e-95 UniRef50_C6NX38 Ni,Fe-hydrogenase III large subunit n=1 Tax=Acid... 350 9e-95 UniRef50_C1TPP0 Ni,Fe-hydrogenase III large subunit n=2 Tax=Syne... 349 1e-94 UniRef50_B6AS24 Putative NADH-ubiquinone oxidoreductase, 49 kDa ... 349 2e-94 UniRef50_A3DKH4 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 ... 347 6e-94 UniRef50_B8J7E4 NADH-ubiquinone oxidoreductase chain 49kDa n=14 ... 347 1e-93 UniRef50_C6PUG2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 346 1e-93 UniRef50_B3T914 Putative Respiratory-chain NADH dehydrogenase, 4... 346 1e-93 UniRef50_D0L1P0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 346 2e-93 UniRef50_A7C1S4 NADH-ubiquinone oxidoreductase subunit n=3 Tax=c... 345 4e-93 UniRef50_B1VSH7 NADH-quinone oxidoreductase subunit D 2 n=6 Tax=... 345 4e-93 UniRef50_B3ES55 NADH-quinone oxidoreductase subunit D n=19 Tax=B... 343 1e-92 UniRef50_D1YVS8 Ech hydrogenase subunit E n=1 Tax=Methanocella p... 343 1e-92 UniRef50_C7DI97 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus ... 342 2e-92 UniRef50_A4WMP9 NADH dehydrogenase (Ubiquinone) n=5 Tax=Thermopr... 342 4e-92 UniRef50_Q2WAW4 Ni,Fe-hydrogenase III large subunit n=11 Tax=Alp... 340 7e-92 UniRef50_D2L9H0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 340 9e-92 UniRef50_D2LH96 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 340 1e-91 UniRef50_C1XWY7 Ni,Fe-hydrogenase III large subunit n=1 Tax=Meio... 339 2e-91 UniRef50_A1KEQ8 Possible formate hydrogenase hycQ (FHL) n=14 Tax... 338 3e-91 UniRef50_A6DAC0 Carbon monoxide-induced hydrogenase, large subun... 337 6e-91 UniRef50_A9A347 NADH dehydrogenase (Quinone) n=3 Tax=Thaumarchae... 337 7e-91 UniRef50_B3TC54 Putative Respiratory-chain NADH dehydrogenase, 4... 337 1e-90 UniRef50_C7I0C0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n... 333 1e-89 UniRef50_B9L8U2 Ech Hydrogenase, Subunit n=3 Tax=Epsilonproteoba... 332 3e-89 UniRef50_Q3JMD7 Hydrogenase subunit n=33 Tax=Burkholderia RepID=... 331 6e-89 UniRef50_B1YB08 NADH dehydrogenase (Quinone) n=5 Tax=Thermoprote... 330 7e-89 UniRef50_C6HVM5 Putative hydrogenase-3 subunit (HycE) n=1 Tax=Le... 328 2e-88 UniRef50_A4XCQ7 NADH-quinone oxidoreductase subunit D 2 n=22 Tax... 328 4e-88 UniRef50_A9BJL6 NADH dehydrogenase (Quinone) n=3 Tax=Thermotogac... 327 1e-87 UniRef50_C7LSU9 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 323 9e-87 UniRef50_Q58433 Uncharacterized protein MJ1027 n=12 Tax=Methanoc... 322 2e-86 UniRef50_A0LSU1 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 322 4e-86 UniRef50_D1LDT9 NADH dehydrogenase subunit 7 (Fragment) n=2 Tax=... 321 4e-86 UniRef50_A6UVJ6 Hydrogenase, component E-formate hydrogenlyase s... 317 6e-85 UniRef50_Q8TY43 Ni,Fe-hydrogenase III large subunit n=1 Tax=Meth... 316 2e-84 UniRef50_Q21TB4 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 315 2e-84 UniRef50_A3DM94 Membrane bound protein complex subunit mbxL n=2 ... 314 5e-84 UniRef50_A0L9R4 Membrane bound protein complex subunit mbxL n=1 ... 314 5e-84 UniRef50_Q5P2H0 Subunit of formate hydrogenlyase-like membrane c... 313 1e-83 UniRef50_UPI00019012E4 NADH dehydrogenase subunit D n=1 Tax=Myco... 313 1e-83 UniRef50_Q57935 Uncharacterized protein MJ0515 n=17 Tax=Euryarch... 313 1e-83 UniRef50_UPI0001C42022 energy-converting hydrogenase B subunit N... 311 7e-83 UniRef50_A9FF67 NAD-dependent dehydrogenase subunit n=1 Tax=Sora... 308 6e-82 UniRef50_A3CUR5 NADH dehydrogenase (Ubiquinone) n=3 Tax=Methanom... 306 1e-81 UniRef50_C0SF51 NADH-ubiquinone oxidoreductase 49 kDa subunit n=... 305 4e-81 UniRef50_Q2NED9 EhbN n=5 Tax=Methanobacteriaceae RepID=Q2NED9_METST 303 9e-81 UniRef50_C6WGH3 NADH dehydrogenase (Quinone) n=1 Tax=Actinosynne... 289 2e-76 UniRef50_A6Q6W4 Ni-Fe hydrogenase, large subunit HycE n=3 Tax=Ep... 286 1e-75 UniRef50_Q5DUX5 NADH-ubiquinone oxidoreductase 49 kDa subunit n=... 286 2e-75 UniRef50_Q0BPG8 Formate hydrogenlyase subunit 5 n=1 Tax=Granulib... 280 1e-73 UniRef50_A5FW46 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 ... 272 3e-71 UniRef50_B0SCU7 Metal (Ni/Fe) hydrogenase, large subunit n=2 Tax... 269 3e-70 UniRef50_C7JEU8 NADH-ubiquinone oxidoreductase 49kDa subunit n=8... 264 9e-69 UniRef50_A5UWP3 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 ... 256 2e-66 UniRef50_D1Y9R2 Respiratory-chain NADH dehydrogenase, 49 Kd subu... 255 3e-66 UniRef50_A9B5Q0 NADH-ubiquinone oxidoreductase chain 49kDa n=1 T... 254 6e-66 UniRef50_Q056K8 Metal (Ni/Fe) hydrogenase, large subunit n=4 Tax... 250 9e-65 UniRef50_C4PZT7 NADH-ubiquinone oxidoreductase fe-s protein 2 (N... 246 2e-63 UniRef50_UPI000186E11F NADH-ubiquinone oxidoreductase 49 kDa sub... 244 9e-63 UniRef50_D1HPS0 Whole genome shotgun sequence of line PN40024, s... 242 3e-62 UniRef50_P21301 NADH-ubiquinone oxidoreductase 49 kDa subunit ho... 237 1e-60 UniRef50_Q978D6 Formate hydrogenlyase subunit 3 n=1 Tax=Thermopl... 232 2e-59 UniRef50_B5ZIZ9 Ni Fe-hydrogenase III large subunit-like protein... 226 2e-57 UniRef50_D2PJN4 Formate hydrogenlyase subunit 5 (HycE) n=10 Tax=... 218 5e-55 UniRef50_Q7G6A6 NAD, putative n=3 Tax=Magnoliophyta RepID=Q7G6A6... 214 1e-53 UniRef50_Q1WLV6 Mitochondrial NADH:ubiquinone oxidoreductase 49k... 211 5e-53 UniRef50_UPI000038DF6E Ni,Fe-hydrogenase III large subunit n=1 T... 211 6e-53 UniRef50_Q6L0U1 Formate hydrogenlyase subunit 5 n=1 Tax=Picrophi... 208 4e-52 UniRef50_Q00390 Coenzyme F420 hydrogenase subunit alpha n=9 Tax=... 202 4e-50 UniRef50_B1L3Q0 Coenzyme F420-reducing hydrogenase, alpha subuni... 201 9e-50 UniRef50_Q5FU77 Putative uncharacterized protein n=1 Tax=Glucono... 197 1e-48 UniRef50_Q2LYD7 Nickel-dependent hydrogenase n=1 Tax=Syntrophus ... 192 2e-47 UniRef50_Q0W6J7 Coenzyme F420-non-reducing hydrogenase (Methyl v... 189 2e-46 UniRef50_D1ICJ9 Whole genome shotgun sequence of line PN40024, s... 187 8e-46 UniRef50_D1ICJ3 Whole genome shotgun sequence of line PN40024, s... 187 1e-45 UniRef50_B6YTV8 Coenzyme F420 hydrogenase alpha subunit n=1 Tax=... 186 2e-45 UniRef50_B8GAR8 NADH-ubiquinone oxidoreductase chain 49kDa n=3 T... 185 4e-45 UniRef50_C1A0H7 Putative NiFe hydrogenase alpha subunit n=2 Tax=... 185 4e-45 UniRef50_P19496 Coenzyme F420 hydrogenase subunit alpha n=2 Tax=... 184 8e-45 UniRef50_Q9KGW7 NADH dehydrogenase I subunit C n=3 Tax=cellular ... 184 1e-44 UniRef50_Q3AU04 Hydrogenase/sulfur reductase, alpha subunit n=10... 184 1e-44 UniRef50_B5YHQ8 Hydrogenase/sulfur reductase, alpha subunit n=2 ... 183 1e-44 UniRef50_B5IEA3 Nickel-dependent hydrogenase superfamily n=3 Tax... 182 5e-44 UniRef50_C5A2R8 Coenzyme F420 hydrogenase subunit alpha (FrhA) n... 181 6e-44 UniRef50_O66988 Hydrogenase large subunit n=1 Tax=Aquifex aeolic... 181 8e-44 UniRef50_B9M7G0 Nickel-dependent hydrogenase large subunit n=5 T... 179 2e-43 UniRef50_Q6ARY7 Related to cytochrome-c3 hydrogenase (NiFeSe), l... 178 4e-43 UniRef50_A1VCV1 Nickel-dependent hydrogenase, large subunit n=2 ... 178 5e-43 UniRef50_Q50783 F420-non-reducing hydrogenase subunit A n=6 Tax=... 178 5e-43 UniRef50_P13065 Periplasmic [NiFeSe] hydrogenase large subunit n... 177 1e-42 UniRef50_B1I3L1 Nickel-dependent hydrogenase, large subunit n=6 ... 176 2e-42 UniRef50_UPI0001C41F73 methyl viologen-reducing hydrogenase alph... 175 4e-42 UniRef50_Q2W3I6 NADH-quinone oxidoreductase subunit C n=6 Tax=ce... 175 4e-42 UniRef50_Q00404 F420-non-reducing hydrogenase vhc subunit A n=10... 175 4e-42 UniRef50_A5UMA1 Coenzyme F420-reducing hydrogenase, alpha subuni... 175 5e-42 UniRef50_A8UU10 Nickel-dependent hydrogenase, large subunit n=1 ... 175 6e-42 UniRef50_B5I9E7 Ni Fe-hydrogenase III large subunit-like protein... 174 7e-42 UniRef50_C8X545 Nickel-dependent hydrogenase large subunit n=1 T... 174 1e-41 UniRef50_A6DBU3 Nickel-dependent hydrogenase, large subunit n=1 ... 171 6e-41 UniRef50_UPI0001B5108B coenzyme F420-reducing hydrogenase, alpha... 171 8e-41 UniRef50_B3E9J3 Nickel-dependent hydrogenase large subunit n=5 T... 170 2e-40 UniRef50_P22320 NAD-reducing hydrogenase hoxS subunit beta n=5 T... 170 2e-40 UniRef50_B8HJR0 Coenzyme F420 hydrogenase n=14 Tax=Bacteria RepI... 169 4e-40 UniRef50_B5YL31 NADH-quinone oxidoreductase n=1 Tax=Thermodesulf... 169 4e-40 UniRef50_Q60338 Coenzyme F420 hydrogenase subunit alpha n=15 Tax... 169 4e-40 UniRef50_C6A4M9 NiFe hydrogenase II, catalytic subunit alpha n=4... 168 4e-40 UniRef50_A7BI76 Ni,Fe-hydrogenase large subunit n=1 Tax=Hydrogen... 168 6e-40 UniRef50_UPI0001C16F92 Nickel-dependent hydrogenase, large subun... 168 6e-40 UniRef50_B9L8N1 Nickel-dependent hydrogenase, large subunit n=1 ... 167 1e-39 UniRef50_A0L610 Nickel-dependent hydrogenase, large subunit n=1 ... 167 2e-39 UniRef50_Q0CI54 NADH-ubiquinone oxidoreductase 30.4 kDa subunit,... 166 2e-39 UniRef50_UPI0001985C72 PREDICTED: similar to NADH dehydrogenase ... 166 2e-39 UniRef50_B5YKI4 NADH-quinone oxidoreductase n=1 Tax=Thermodesulf... 166 3e-39 UniRef50_C7NPL2 Nickel-dependent hydrogenase large subunit n=1 T... 166 3e-39 UniRef50_Q1PWG9 NADH-quinone oxidoreductase n=1 Tax=Candidatus K... 165 6e-39 UniRef50_C8WGI5 Nickel-dependent hydrogenase large subunit n=1 T... 164 6e-39 UniRef50_A6Q3L3 Ni-Fe hydrogenase, large subunit HupV n=1 Tax=Ni... 164 8e-39 UniRef50_Q58592 F420-non-reducing hydrogenase vhu subunit A n=22... 164 8e-39 UniRef50_A4GJ20 NADH-quinone oxidoreductase n=1 Tax=uncultured m... 163 1e-38 UniRef50_O28899 Methylviologen-reducing hydrogenase, subunit alp... 163 2e-38 UniRef50_A7NIW0 NADH-quinone oxidoreductase subunit C n=6 Tax=Ch... 163 2e-38 UniRef50_A8M620 NADH-quinone oxidoreductase subunit C n=14 Tax=A... 162 3e-38 UniRef50_C0QP83 Nickel-dependent hydrogenase, large subunit n=2 ... 162 3e-38 UniRef50_UPI0001926F1C PREDICTED: similar to NADH dehydrogenase ... 161 8e-38 UniRef50_Q2J4F0 Nickel-dependent hydrogenase, large subunit n=4 ... 160 9e-38 UniRef50_Q28T74 NADH-quinone oxidoreductase subunit C n=7 Tax=Al... 160 9e-38 UniRef50_A6QAV5 Ni-Fe hydrogenase, large subunit HupV n=1 Tax=Su... 160 1e-37 UniRef50_A9W1N1 NADH-quinone oxidoreductase subunit C n=9 Tax=Al... 160 1e-37 UniRef50_Q9XBW8 HoxH n=1 Tax=Rhodobacter capsulatus RepID=Q9XBW8... 160 1e-37 UniRef50_B5EQ52 Nickel-dependent hydrogenase large subunit n=10 ... 160 1e-37 UniRef50_A8ZNU6 Hydrogenase large subunit HoxH n=62 Tax=Bacteria... 160 2e-37 UniRef50_A5I2W3 Hydrogenase large subunit n=15 Tax=Clostridium R... 160 2e-37 UniRef50_C0QPV5 Hydrogenase large subunit n=2 Tax=Hydrogenotherm... 160 2e-37 UniRef50_C0GED6 Nickel-dependent hydrogenase large subunit n=1 T... 159 2e-37 UniRef50_D1CCD3 NADH-quinone oxidoreductase n=1 Tax=Thermobaculu... 159 3e-37 UniRef50_A8XGA9 C. briggsae CBR-NUO-2 protein n=2 Tax=Caenorhabd... 159 4e-37 Sequences not found previously or not previously below threshold: >UniRef50_D2U4G0 NADH-quinone oxidoreductase chain C/D n=1 Tax=Arsenophonus nasoniae RepID=D2U4G0_9ENTR Length = 614 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 506/599 (84%), Positives = 545/599 (90%), Gaps = 4/599 (0%) Query: 1 MTDLTAQE---PAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVG 57 +TD QE P WQT DH DDP+I LRN+F PDAFT+Q+TRTG+ V+WIKREQLL V Sbjct: 17 ITDQITQESVRPVWQTYDHCDDPIILALRNQFSPDAFTIQSTRTGMLVIWIKREQLLAVI 76 Query: 58 DFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEND 117 +FLKK PKPYVMLFDLHG+DER R +R GLP ADFSVFYHLISI+RNRDIMLKVAL+E D Sbjct: 77 EFLKKQPKPYVMLFDLHGVDERQRVYRHGLPDADFSVFYHLISIERNRDIMLKVALSEKD 136 Query: 118 LHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 177 L+VP+ LFPNANWYERE WD+FGITF GHPNLRR++MP TW+GHPL KDYPARATEF Sbjct: 137 LNVPSLVSLFPNANWYEREVWDMFGITFTGHPNLRRLLMPVTWQGHPLCKDYPARATEFD 196 Query: 178 PFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEE 237 PF LTK K DLEME+LTFKPEEWGM RG E+EDFMFLNLGPNHPS+HGAFRIVLQLDGEE Sbjct: 197 PFVLTKQKLDLEMESLTFKPEEWGMARGNEHEDFMFLNLGPNHPSSHGAFRIVLQLDGEE 256 Query: 238 IVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPD 297 I+DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGI VP+ Sbjct: 257 IIDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIDVPE 316 Query: 298 RVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPA 357 RV IRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYD++EAITGFRMHPA Sbjct: 317 RVMTIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDIIEAITGFRMHPA 376 Query: 358 WFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALE 417 WFRIGGVAHDLP+GW +LL+EFLDWMPKRL SY KAALQN+ILKGRS GVAAY KEAL+ Sbjct: 377 WFRIGGVAHDLPQGWQKLLQEFLDWMPKRLDSYVKAALQNSILKGRSVGVAAYTTKEALD 436 Query: 418 WGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRIL 477 WG TGAGLRATG+DFD+RK RPYSGYENF+FE+P+G DCY RVMLKVEELRQSL IL Sbjct: 437 WGVTGAGLRATGLDFDIRKWRPYSGYENFEFEVPIGNN-GDCYDRVMLKVEELRQSLHIL 495 Query: 478 EQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATK 537 +QCLNNMP GPFKADHPLTTPPPKERTLQHIET+I HFLQVSWGPVMPANE+FQMIEATK Sbjct: 496 KQCLNNMPAGPFKADHPLTTPPPKERTLQHIETMINHFLQVSWGPVMPANEAFQMIEATK 555 Query: 538 GINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 GINSYYLTSDG+TMSYRTRVRTPSFAHLQQIPA IRGSLVSDLIVYLGSIDFVMSDVDR Sbjct: 556 GINSYYLTSDGNTMSYRTRVRTPSFAHLQQIPAVIRGSLVSDLIVYLGSIDFVMSDVDR 614 >UniRef50_Q2YAA3 NADH-quinone oxidoreductase subunit C/D n=259 Tax=cellular organisms RepID=NUOCD_NITMU Length = 608 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 368/586 (62%), Positives = 450/586 (76%), Gaps = 10/586 (1%) Query: 20 PVIGELRNRFGPDAFT--------VQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVML 70 V+ EL+NRFGP VQ T +P W+ R ++ EV +LK K +PY ML Sbjct: 24 DVLEELKNRFGPPGTDNPGGPMGVVQKTGDDLPTQWVSRNRVHEVLHYLKLKAERPYRML 83 Query: 71 FDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNA 130 +DL +DER R HRE PA+ F+V YHL+S +RN D+ LKVAL + DL +PT T ++P A Sbjct: 84 YDLTAIDERTRVHREDQPASRFTVIYHLLSFERNADVCLKVALTDTDLRMPTITDIWPAA 143 Query: 131 NWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEM 190 NWYERE WD+FGI FDGHP+LRRI++P W+GH LRKD+PARATE PF L+ K++ E Sbjct: 144 NWYEREIWDMFGIVFDGHPHLRRILLPPWWQGHALRKDHPARATEMEPFHLSTEKEEAEQ 203 Query: 191 EALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHR 250 E L F PEEWGM+R + DFMFLNLGPNHPS HG FRIVLQLDGEEI+D VP+IG+HHR Sbjct: 204 ETLRFHPEEWGMRRTHDGTDFMFLNLGPNHPSVHGVFRIVLQLDGEEIIDAVPEIGFHHR 263 Query: 251 GAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELF 310 GAEKMGERQSWH+YIPYTDRI+YLGG +N +PYVLAVEKLAGI VPDRV V+RVM++E F Sbjct: 264 GAEKMGERQSWHTYIPYTDRIDYLGGVMNNLPYVLAVEKLAGIEVPDRVKVMRVMMAEFF 323 Query: 311 RINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPR 370 RI SHL++ TF QD+GA++PVFF FTDR++++D+VEAI G RMHP+W+RIGGVA DLP Sbjct: 324 RIASHLVFYGTFTQDLGALSPVFFMFTDRERVFDVVEAICGGRMHPSWYRIGGVAQDLPN 383 Query: 371 GWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI 430 GWDR++R+FLD+MP RL Y+K A+ N ILK R++GV Y EA+EWG TG LRA G Sbjct: 384 GWDRMVRDFLDYMPARLDEYDKIAVGNRILKARTRGVGGYSIDEAIEWGVTGPNLRACGF 443 Query: 431 DFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFK 490 ++D RKARPYSGY+ F+F++P G DCY R ++V+E+RQSLRI++QCL NMP G K Sbjct: 444 EWDFRKARPYSGYDQFEFDVPTGQH-GDCYDRCAVRVQEIRQSLRIIDQCLENMPAGAHK 502 Query: 491 ADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST 550 ADHPLTTPP K+ TL IETLI HFL VSWGPV+P E+F IEATKG N YYL SDG+T Sbjct: 503 ADHPLTTPPLKKHTLHDIETLIDHFLGVSWGPVIPPGEAFVGIEATKGNNGYYLISDGNT 562 Query: 551 MSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +YR R+RTPSF HLQ IP RG ++SDLI LGSIDFVM+DVDR Sbjct: 563 TAYRVRIRTPSFPHLQMIPLISRGLMISDLIAILGSIDFVMADVDR 608 >UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 Tax=cellular organisms RepID=NUBCD_PELCD Length = 794 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 274/578 (47%), Positives = 374/578 (64%), Gaps = 11/578 (1%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMDE 78 P++ +LR RFG D Q +P + Q+ E+ FLK + +PY L DL +DE Sbjct: 227 PLLEQLRERFGDDVR--QEEGADMPTLVADPAQVPELLRFLKQDIDQPYERLEDLTAIDE 284 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R+ R PA D ++ YHL+S +R + +K L + VP+ T L+P ANWYERE + Sbjct: 285 TARSQR---PAHDLTMVYHLLSFERAGYLRVKAPLRNDRAEVPSITGLWPAANWYEREAF 341 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 D+FG+ F GHP+LRRI+MP+ W+GHPLRK +P+RAT+ PF A + E F Sbjct: 342 DMFGVRFAGHPDLRRILMPEGWQGHPLRKSHPSRATDMPPFTRDTATTMVPPEGSHF--- 398 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 + + +N+ LNLGP HP HG R++LQL GEEIVD +IGYHHRGAEK+ ER Sbjct: 399 -FSNRAPVDNQSLSILNLGPQHPGTHGILRVILQLAGEEIVDLDSEIGYHHRGAEKIAER 457 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY 318 Q W+ YIPYTDRI+YL G +N + Y+ +VE L G+ VP R IRV+LSELFRI SHL++ Sbjct: 458 QHWNQYIPYTDRIDYLAGSLNNLAYLYSVETLCGVEVPPRARYIRVLLSELFRIASHLVW 517 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 + TF DVGAMTPVF+AF R+KI+D++E ITG RMHPAWFRIGGV DLP GW + Sbjct: 518 LGTFAHDVGAMTPVFYAFDSREKIFDIIELITGGRMHPAWFRIGGVPDDLPDGWLAAVEA 577 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 F R+ +++ I + R++G+ ++A+E G +G LRATG+ +D+RK+ Sbjct: 578 FTRDFEARIDEFDRLLTGGPIFRARTEGIGTVSRQQAVELGFSGPNLRATGLAWDLRKSM 637 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY GY+ FDF++ V G DC+ R ++++ ELRQSLRI+ Q MP+G + +D Sbjct: 638 PYGGYDEFDFDV-VTAGGGDCFARYLVRLGELRQSLRIVRQAAEGMPQGRWISDQYRYAY 696 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 P +E LQ IE+LI HFL VS GP P E ++ IE++KG YY SDG T +YR R+R Sbjct: 697 PKREDGLQDIESLIHHFLHVSRGPAAPRGECYRAIESSKGECGYYAVSDGGTGAYRLRIR 756 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 TPSF HLQ +P RG LV+D+I LGS+D+V++D+DR Sbjct: 757 TPSFPHLQALPQLSRGRLVADVITILGSLDYVLADLDR 794 >UniRef50_D2MJM9 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJM9_9BACT Length = 583 Score = 587 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 215/590 (36%), Positives = 320/590 (54%), Gaps = 20/590 (3%) Query: 19 DPVIGELRNRFGPDAFTVQAT-RTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGM 76 V+ L RF +V+ + G ++ + L+EV FL P + L D+ Sbjct: 2 HRVLETLHERFPEAVLSVREDPQRGDLSAQVRAQDLVEVARFLHDDPGMAFDHLTDICSA 61 Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D F V YH +S+ N I LK + E + T T ++ AN+ ERE Sbjct: 62 DYPDDL-------ERFEVIYHFLSLPHNTRIRLKTRVTEEQPTLGTVTSIWKGANFLERE 114 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWK-GHPLRKDYPARATEFSPFELTKAKQDLEMEALTF 195 +DL GITF+GHP+LRRI++P+ ++ GHPLRKD+P + + D T Sbjct: 115 VYDLMGITFEGHPDLRRILLPEDYEEGHPLRKDFPTEGKGWRSTFDFIPRLDEPESEWTE 174 Query: 196 KPEEWGMKRGT---------ENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIG 246 + + + + LN+GP HPS HG R+VL+LDGE + VPD+G Sbjct: 175 REIPQDQRHMFLAGDAPESAKRTTELLLNMGPQHPSTHGVLRVVLELDGERVAKAVPDMG 234 Query: 247 YHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVML 306 Y HRG EK+ E + IP+TDR++Y+ N YV AVEKL G+T+P+R +R ++ Sbjct: 235 YLHRGVEKLAEGLHYMQVIPHTDRLDYVCAMTNNYAYVRAVEKLVGVTIPERAEYVRTIV 294 Query: 307 SELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAH 366 +E+ RI HL ++ T D+GAMT F+ F +R+ + D E + G R+ ++RIGGV Sbjct: 295 AEVQRIVGHLFWLGTQALDIGAMTVFFWTFREREVLLDFFEQLCGARLTLNYYRIGGVDG 354 Query: 367 DLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR 426 DL LR FL P+ + Y+ +N I R++ VA A++A+ +G TG LR Sbjct: 355 DLTPALIERLRGFLKTFPEHVQEYDTLLQRNRIWVARTKNVAVISAEDAINFGLTGPTLR 414 Query: 427 ATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE 486 +G+ +DVRK PY Y+ ++++PVG D Y R ++VEE++QS RI+EQCL+ +PE Sbjct: 415 GSGVAYDVRKLEPYGVYDRVEWDVPVG-KGGDTYDRYWIRVEEMKQSARIIEQCLDQLPE 473 Query: 487 GPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS 546 GP AD P PP K ++ +E+LI HF+ + G P E++ E KG ++L S Sbjct: 474 GPIMADMPQVIPPAKPNVMRDMESLIHHFIIFTQGFKPPKGETYCGTEVPKGELGFFLIS 533 Query: 547 DGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 DGS YR ++R+PSF H+ RG L+SD+I G+ D VM + DR Sbjct: 534 DGSPRPYRMKIRSPSFVHMGAFDFMARGYLISDIITIFGTYDIVMGECDR 583 >UniRef50_Q6MIR5 NADH-quinone oxidoreductase subunit C/D n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOCD_BDEBA Length = 560 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 197/578 (34%), Positives = 304/578 (52%), Gaps = 22/578 (3%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 + + L +F + F G V+ + +E + FL++ + L D+ G D Sbjct: 5 ENLKQLLAGKFKIENFKFT-HAVGDDVIEVPKEDAPALLLFLRESG-QFDFLMDVCGADY 62 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R F V Y+L + + + +K + E + + T + A+W+ERE + Sbjct: 63 PSR-------EKRFDVVYNLFNSKDSSRLRVKAQVGEGE-SIGTAIPAYRGADWFEREAY 114 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 D+FGI F+GHPNLR+I+ + GHPLRKDY A + L Sbjct: 115 DMFGIIFEGHPNLRKILTHHQFVGHPLRKDYDANNQQACTNSLPI-----------HFNN 163 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 E G N+ ++ LN+GP+H + HG R++ ++DGE IV C +IGY HR EKM E Sbjct: 164 EPGSPGDVLNDKYLPLNIGPSHTAMHGTLRVMAEMDGETIVRCNNEIGYLHRCFEKMAET 223 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY 318 ++ IPYTDR+ Y +N + Y AVE+L G+ +P + +RV+L+EL RI H + Sbjct: 224 HPYNQVIPYTDRLNYCSAPMNNIGYCKAVERLLGVEIPPKAQAMRVILAELSRIIDHTIA 283 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 I T D+GA+T F+ F R+K+Y L E + G R+ + RIGG+A D P GW + Sbjct: 284 IGTGAMDLGALTSFFYMFGMREKVYGLFEKLCGARLTVSMTRIGGMAQDAPEGWFDEVLA 343 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 + + K + N I R++ V A +A++WG TG LRA G++ D+RKA+ Sbjct: 344 LVKEIRKGTDEMANMVIDNKIFIQRTKNVCPVSAADAIQWGYTGPMLRACGVNLDLRKAQ 403 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY GY+ DF++PVG D Y R +++ EE+RQS+RI+EQ N+P G + Sbjct: 404 PYYGYDALDFDVPVGTN-GDIYDRYLVRFEEMRQSVRIIEQVCKNVPGGDYTIRDKGIVL 462 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 P K+ +IE L+ HF+ + G P E + EA G +YL SDGS YR +VR Sbjct: 463 PEKKDVYGNIEGLMNHFMLIIKGLRPPVGEVYDATEAANGELGFYLVSDGSANPYRLKVR 522 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 P FA Q P ++G++++D I + S++ + ++DR Sbjct: 523 PPCFAIYQSFPTVVKGAMLADAIATVASMNLIAGELDR 560 >UniRef50_Q2C5T4 NADH dehydrogenase I, B/C/D subunits n=2 Tax=Photobacterium RepID=Q2C5T4_9GAMM Length = 565 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 250/574 (43%), Positives = 351/574 (61%), Gaps = 19/574 (3%) Query: 25 LRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKL-PKPYVMLFDLHGMDERLRTH 83 L RF A + G +K+E L++ FLK + MLFDL +DE R Sbjct: 9 LIERFDAKAPNHEII--GCESFEVKKEHLIDTLHFLKNEASSRFEMLFDLSAIDECER-- 64 Query: 84 REGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGI 143 SVFY+L+S+ + I ++ +A + + VPT L+PNANWYERE +D+FGI Sbjct: 65 -----GGGLSVFYYLLSVKNKQFISIRTHIANDTIEVPTVVGLWPNANWYEREVYDMFGI 119 Query: 144 TFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMK 203 F HP+LRRI+ WKGHPLRK YP RAT + + Sbjct: 120 KFTDHPDLRRILTFDFWKGHPLRKSYPCRATLMDEPFDLEGPDFD-------DVMKSYDI 172 Query: 204 RGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHS 263 +G +++ M LN+GPNHP G R+ +++ GE I D +IG+HHRGAEK+ ER ++H+ Sbjct: 173 QGKQDDGSMVLNIGPNHPGTDGVIRLKVKMKGEFIEDLDQEIGFHHRGAEKIAERHTFHN 232 Query: 264 YIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI 323 YIPYTDRI+YLGG E+PY+L +E + GI VP+R +R+ML ELFRI+SHL++ + Sbjct: 233 YIPYTDRIDYLGGVAGELPYLLGLEAMTGIEVPERAKTMRIMLCELFRISSHLVWFGSIT 292 Query: 324 QDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWM 383 ++G M P F+AFT+R+KI+D++E I G RMHPA+FRIGGV+ DLP GW + + Sbjct: 293 HNLGGMAPAFYAFTEREKIFDVIELICGGRMHPAFFRIGGVSQDLPDGWQDKVEHACQGI 352 Query: 384 PKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 + + EK + I K R+Q +A Y AL+WG TG LRATGI+FD+RK PY GY Sbjct: 353 EQLVPDLEKLMTHSMIFKIRTQNIAVYSQSMALDWGLTGPNLRATGINFDMRKDFPYMGY 412 Query: 444 ENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH-PLTTPPPKE 502 E++DF++PVG D YTR +L+V+E+ +SL+I+ Q MPEGP AD+ P P K+ Sbjct: 413 EDYDFDVPVGQD-GDAYTRTVLRVQEVVESLKIIRQAAARMPEGPILADNAPSFGFPRKQ 471 Query: 503 RTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSF 562 L+ IETLI F+ G P E+F E KG+ SY+ S+G+ YR R+RTPSF Sbjct: 472 NALRDIETLIHSFVDTGRGFNFPVAETFYATETAKGVTSYHTISNGTGCPYRVRIRTPSF 531 Query: 563 AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 H Q + A +G L+S++I +GSID+V++D+DR Sbjct: 532 THFQSVKAVSKGDLLSNIICLIGSIDYVLADIDR 565 >UniRef50_C6NSM4 NADH dehydrogenase I, B/C/D subunits n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSM4_9GAMM Length = 565 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 238/577 (41%), Positives = 335/577 (58%), Gaps = 15/577 (2%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDER 79 + L+ F A A + L +L+ + PY L+DL MDER Sbjct: 3 LAEALQKEFS--ATPFTAACDDCLDFSLPTANLKPCLRYLRDDWRSPYRCLWDLTAMDER 60 Query: 80 LRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWD 139 F++ YHL + + L+V L P+ T L+ NANWYERE +D Sbjct: 61 P-------SGGGFTLIYHLFNYAVGELLRLRVPLPAGQETAPSLTDLYANANWYEREVYD 113 Query: 140 LFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEE 199 LFG+ F GHP+LRRI++P W+GHPLRK+ RATE P + + + + + Sbjct: 114 LFGLRFAGHPDLRRILLPPQWRGHPLRKEEAIRATERPPIVIDREHLQERL----GEYQR 169 Query: 200 WGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ 259 + ++ + M LN+GP+HP HG R +L+L GEEIV PDIGYHHRG EK+ E Sbjct: 170 SPDGQALDDGETMVLNVGPHHPGTHGILRYILRLRGEEIVAVDPDIGYHHRGVEKIAEGH 229 Query: 260 SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYI 319 S+H++IPYTDR++YLGG + E PY+ A+EKLA I VP+R IR +L+EL RI+SHL+++ Sbjct: 230 SYHNFIPYTDRVDYLGGVLGEWPYLRAIEKLAAIHVPERAEGIRTLLAELCRISSHLVWL 289 Query: 320 STFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREF 379 ++ D+G M P F+AF DR + +L+E TG R+HP +FRIGGVA DLP GW L Sbjct: 290 GSYGNDLGTMGPAFYAFRDRAWLLELMERFTGGRLHPQFFRIGGVADDLPEGWRSDLLAL 349 Query: 380 LDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARP 439 L + K L E+ ++N I + R++GV A++A W T LR+TG FD+RKA P Sbjct: 350 LRRIEKGLPDSERLTVENPIFRARTEGVGVVTAEQAERWCATSILLRSTGRAFDLRKAAP 409 Query: 440 YSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 Y Y+ DFE+PV D ++R L + E+R+S+RIL Q + +PEGP A Sbjct: 410 YGLYDRVDFEVPVTT-AGDAWSRTWLHIAEIRESIRILRQLADILPEGPTLACDAPLALM 468 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 PK RTL IETLI HF Q++ P + + E+ +G+ Y++ SDG YR RVRT Sbjct: 469 PKSRTLLDIETLIHHFEQMADAFGPPPGSALGLGESARGLLGYFVVSDGGPKPYRLRVRT 528 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SFAH+Q I RG + D I +GS+D+V++D+DR Sbjct: 529 GSFAHVQMITELGRGLRLPDFIATIGSLDYVLADLDR 565 >UniRef50_B6YTW8 Hydrogenase 4, component G or formate hydrogen lyase, subunit 5 n=5 Tax=Thermococcaceae RepID=B6YTW8_THEON Length = 584 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 160/598 (26%), Positives = 254/598 (42%), Gaps = 67/598 (11%) Query: 5 TAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLE-VGDFLKKL 63 E A TR++LD+ + +FG V+ ++ ++RE L E V FL Sbjct: 18 RGDEKAKVTREYLDE-----IIEKFGEKIRDVKQAAYNQWIITVEREDLPEIVLYFLNHP 72 Query: 64 PKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLI--SIDRNRDIMLKVALAENDLHVP 121 L + DER FS+ Y L + + ++ L E+D Sbjct: 73 EWKETQLSSMVATDERPLN-------GKFSITYWLSVNGKAGDFYLGVRAYLPEDDPRFT 125 Query: 122 TFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPF 179 + ANWYERE ++ G+T +GHP+ RR+++P W +PLRKD+ + Sbjct: 126 SIAAKHRGANWYEREAMEMLGLTAEGHPDPRRLVLPDDWPSCVYPLRKDFHYSNSPPGEK 185 Query: 180 ELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIV 239 +D + + GP H + A L + GE I Sbjct: 186 ---------------------FYPYKEPKKDEIVVPYGPYHVALEEAAHFRLYVKGETIT 224 Query: 240 DCVPDIGYHHRGAEKMGERQ-SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDR 298 D Y HRG EK+ E + ++ +RI + GC + Y AVE GI VP+R Sbjct: 225 DVDYRGFYAHRGIEKISEGRLTYDQVCFIAERICGICGCTHSTAYCQAVENAGGIEVPER 284 Query: 299 VNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAW 358 IR ++ E+ R++SHLL VG A+ R+ + L E +TG R Sbjct: 285 AEYIRTIVLEIERLHSHLLNFGIVSHLVGYDYGFMKAWRIREHVMWLAERLTGNRKTYGM 344 Query: 359 FRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEW 418 +GGV DL L+ + L + + A+ + R +GV K A EW Sbjct: 345 LLVGGVRRDLLEYRKSLIEDVLKKIKTEFSELVDEAISTSTFVKRLEGVGVLPYKVAKEW 404 Query: 419 GTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILE 478 G R +G DFDVR+ PY+ Y+ DF++PV D R ++++EE+ +S+ I+E Sbjct: 405 DVDGPLGRGSGRDFDVRRDHPYAAYKYLDFKVPVYKE-GDVLARALVRIEEVFESIWIIE 463 Query: 479 QCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG 538 Q L+ MP G A+ + + P +E+ M EA +G Sbjct: 464 QALDQMPGGDILAE---------------------------YKEIPPYSEAIGMTEAPRG 496 Query: 539 INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 N +Y+ + + YR R R ++ +L +P +RG ++D + + SID S +R Sbjct: 497 ENIHYVMTGENNKVYRYRARAATYNNLPAVPDMMRGYTIADAPLIVASIDPCYSCTER 554 >UniRef50_B2V8J2 NADH-quinone oxidoreductase subunit C/D n=15 Tax=Aquificales RepID=NUOCD_SULSY Length = 576 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 193/592 (32%), Positives = 298/592 (50%), Gaps = 37/592 (6%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDE 78 +L RFG + + GV V + +++ +E FLK+ P+ + M DL +D Sbjct: 7 EKAKKLEERFG---YPKVSEGKGVLSVEVPKDKFIEFLTFLKEDPEYQFKMFIDLTIIDH 63 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 + + F L S I++K + +PT T L+ A W ERE W Sbjct: 64 GEKEN------PRFQGVVILFSPKNQERIIVKTWA--ENETLPTLTNLWKGAKWAEREAW 115 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 D+FGI F+GH NL R+++ +T+ HPLRKD+P + + E F + Sbjct: 116 DMFGIKFEGHENLVRMLLWETYPYHPLRKDFPLEGIKDTELPSLNETLRGENLEGLFNYD 175 Query: 199 EW-------------GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDI 245 KR + LN GP HP HG + LDGE + C I Sbjct: 176 RMHTALPTMEDLEITQKKRMPVKTSQIVLNWGPLHPGTHGTIWFLFDLDGEYVKQCDIII 235 Query: 246 GYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVM 305 G HRG EK+GE +W +IPYTDR++Y+ YVLA EK+ GI VP++ IR M Sbjct: 236 GQLHRGVEKLGENVNWQQFIPYTDRMDYIAAINENHAYVLAAEKMLGIEVPEKAKWIRTM 295 Query: 306 LSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA 365 ++EL RINSHLL++ T+ D+GA+T + F +R+KI D++E ITG R +FRIGGV Sbjct: 296 MAELSRINSHLLWLGTYALDLGALTMFLYTFREREKIMDIIEGITGARFTINYFRIGGVF 355 Query: 366 HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGL 425 DLP G + + +P+R+ YE +N + R++ V ++ ++G TGA Sbjct: 356 ADLPYGALDAIEHLIKDLPQRINDYETLLTRNRVWLSRNKDVCVITEEDVYQYGLTGAVA 415 Query: 426 RATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP 485 R +G+ +DVRK Y Y +F+IPVG D Y R ++++EE+RQS+RI+EQC+ + Sbjct: 416 RGSGVPYDVRKIDKYDAYGEVEFDIPVGEK-GDSYDRYLVRMEEMRQSIRIIEQCIAKLR 474 Query: 486 EGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT 545 + + TP K+ + G +PA E++ + +G +Y+ Sbjct: 475 KMSKDDPYFFQTPDEKKLKVT----------IDGRGMKLPAGETYASSDNPRGELGFYIY 524 Query: 546 SDGST-MSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + ++R R+R+ +F +LQ AI G ++D I L +ID V+ + DR Sbjct: 525 NKKDGLKAHRMRIRSGAFYNLQVFTKAIIGRPIADAITLLSTIDPVVGETDR 576 >UniRef50_A0RMD1 NADH-quinone oxidoreductase subunit C/D n=5 Tax=Bacteria RepID=NUOCD_CAMFF Length = 561 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 179/576 (31%), Positives = 299/576 (51%), Gaps = 15/576 (2%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 ++ + ++F +T G+ V I + E F++ + +L D+ +D Sbjct: 1 MLEKFSSKFN---VLKHSTTNGLLSVQINPNDIYEAVLFVRDN-IGFEILADIVCVDNLY 56 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 FS++Y I + ++ + + + + V + ++ +ANW ERE +D Sbjct: 57 ID-----KEKRFSLYYIFRKIS-SENLCIYIDID-INQSVKSVESIYKSANWGERECFDQ 109 Query: 141 FGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEW 200 FG+ F+ HPNL+RI+ + ++G+PLRKDYP + EM+ + Sbjct: 110 FGVKFENHPNLKRILNHKDFQGYPLRKDYPITKYQVLYESDD---LVGEMKNEMQRAGLA 166 Query: 201 GMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 260 + + FLN+GP+HP+ HG R + LDGE+I+ CV +IGY HRG EK E S Sbjct: 167 SEENDEFKTKYTFLNIGPSHPATHGTIRNFVALDGEKIISCVTEIGYLHRGFEKACENHS 226 Query: 261 WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS 320 + IPYTDR+ Y +N + Y AVE+ G+ +PDR +RV+L EL RI H + + Sbjct: 227 YAQIIPYTDRLNYCSAMLNNVGYAKAVEEALGLNLPDRGIFMRVILGELARIIDHEVCLG 286 Query: 321 TFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 D+G +T ++ + R++IY+ + +TG R ++ RIGG+A+D GW L L Sbjct: 287 AMFVDMGGLTNYWYLYNPRERIYNFLSKLTGARFTNSFARIGGMANDFYDGWKEELLAHL 346 Query: 381 DWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPY 440 + K + +N I R Q + A +AL +G +G LRA+G+ FD+RK +PY Sbjct: 347 KDVEKGVDDTMILIEKNRIFLDRVQNICKINANDALSYGFSGPNLRASGVSFDLRKDKPY 406 Query: 441 SGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPP 500 Y++FDF +PVG D Y R+ ++ E+R+S+ I+ Q + +PEG D P Sbjct: 407 YYYDSFDFSVPVGSE-GDIYDRMFVRFFEMRESISIIRQAIKLIPEGKISVDDKDVFLPS 465 Query: 501 KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP 560 K++ +IE+LI HF + G +P + E G +++ S+ YR ++R P Sbjct: 466 KDQVYSNIESLINHFKLIFDGIKLPNGHFYSASEGANGELGFFIFSNSEPNPYRVKLRPP 525 Query: 561 SFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F L + ++GSL++D I+ LGS++ + ++DR Sbjct: 526 CFYALNAFSSMVQGSLIADSILNLGSLNIIAGELDR 561 >UniRef50_A1RWL3 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=2 Tax=Archaea RepID=A1RWL3_THEPD Length = 567 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 147/587 (25%), Positives = 247/587 (42%), Gaps = 65/587 (11%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 + + ++R G V+ ++++R +L EV ++ + L + G DE Sbjct: 6 ERLEEKIRKEIGGLLLGVEKPYPDQLYLYVERTKLPEVCSYVYYELGGF--LSTMAGSDE 63 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNR------DIMLKVALAENDLHVPTFTKLFPNANW 132 R Y++ SI+ +++ + +D + T P A+W Sbjct: 64 RSL--------HGAYRLYYVFSIEEGYEDGKKPWVVVVTNIPPHDTKFSSVTPKIPAASW 115 Query: 133 YERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEM 190 YERE DL G+ + HP+ RR+++P W HPLRK++ S + + +E Sbjct: 116 YEREVRDLLGLVPENHPDPRRLVLPDDWPEGVHPLRKEFTYTERPPSVARKCEFRPSVEG 175 Query: 191 EALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHR 250 E M + +GP H A + + LDGE++VD + Y HR Sbjct: 176 E------------------GIMQVPIGPVHAVADEPGQFRVFLDGEKVVDVDYRMFYVHR 217 Query: 251 GAEKMGERQ-SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSEL 309 G EK+ E + +++ +RI + G + Y AVE+ GI VP+R IR ++ E+ Sbjct: 218 GIEKLAESRLTYNQVPFIAERICGICGYAHSCAYCQAVEQALGIEVPERALYIRTLMLEV 277 Query: 310 FRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP 369 R++SHLL + G F R+K+ + E +TG R +GGV D+ Sbjct: 278 ERLHSHLLNLGLACHLAGFDWGFMAFFKAREKVMYMAELLTGGRKTYGMNVVGGVRRDIT 337 Query: 370 RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATG 429 + E L + K + A L + L R++ V A + G R + Sbjct: 338 EDRAKKALEILKEVEKEYKAVLDAVLSTSTLVSRAKDVGVLPRDVARKVSVVGPVARGSS 397 Query: 430 IDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPF 489 I D RK PY+ Y DF++PV D R+ ++ EE +++ I+ Q L NMP GP Sbjct: 398 IKRDTRKDHPYAAYSEVDFKVPV-HSEGDVLARLSVRAEETFETISIIRQVLENMPGGPI 456 Query: 490 KADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS 549 +A+ P +EA +G + +++ + Sbjct: 457 QAEVKEYR---------------------------PYARGLGYVEAPRGEDVHFVITGPH 489 Query: 550 TMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + YR RVR ++ + IP RG ++DL + +GSID S +R Sbjct: 490 SKVYRWRVRASTYNNWPAIPYMCRGYTLADLPLIIGSIDPCYSCTER 536 >UniRef50_B6YWP8 Hydrogenase 4, subunit 5 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWP8_THEON Length = 540 Score = 486 bits (1251), Expect = e-136, Method: Composition-based stats. Identities = 156/557 (28%), Positives = 239/557 (42%), Gaps = 63/557 (11%) Query: 43 VPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISID 102 + V + + E+ L + Y G+DER P YH+ + D Sbjct: 18 MTVAEVGASNIREIARALFERGYYYSSGM---GVDER--------PINGRFAMYHIFNCD 66 Query: 103 -RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 R ++LK+ E VP+ T + A W ERE D+ GI F GHP R+++P W Sbjct: 67 TEGRYVVLKITSPEGSPEVPSITPVIKGAEWSEREAMDMLGIVFSGHPKPERLILPDDWP 126 Query: 162 G--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPN 219 +PLRKD+P + K +D M + LGP Sbjct: 127 EGVYPLRKDFPYNKKLPPSKPIEKE--------------------REHKKDVMEIPLGPY 166 Query: 220 HPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ-SWHSYIPYTDRIEYLGGCV 278 HPS H L + G+++VD + HRG EK+ E + + + +RI + GC Sbjct: 167 HPSLHEPEYFELYVKGDKVVDAEYRGFHIHRGMEKLAESRMTINQIPFLAERICGICGCT 226 Query: 279 NEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTD 338 + Y AVE AGI VP+R IR ++ E+ RI+SHLL+ +G + + Sbjct: 227 HSAAYCQAVEDAAGIYVPERAQYIRTIMLEVERIHSHLLWFGVVCHLLGFDSGFMHIWRA 286 Query: 339 RQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNT 398 R+ I D+ E ITG R +GGV D+ + LD + K + Sbjct: 287 REYIMDIAELITGNRKTYGINIVGGVRRDITEDKKEKTLKLLDMVEKESREVLDNIAEMK 346 Query: 399 ILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSD 458 L+ R +GV KEA E G G R++GID DVR+ PY+ Y++ DF++PV D Sbjct: 347 ELRERMEGVGVLPKKEAREIGVVGPMARSSGIDTDVRRDHPYAAYKDLDFKVPVYKE-GD 405 Query: 459 CYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQV 518 + R +++ EE+ +S ++ Q L NMP G D Sbjct: 406 VFARFLVRYEEIFESFNMIRQALENMPPGELINDEY------------------------ 441 Query: 519 SWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVS 578 + P + EA +G N + + + G M YR R ++ +L +P +RG+ V+ Sbjct: 442 ---EIPPFKLGIGVTEAPRGENIHAVITWGENMIYRWHPRAATYNNLPAVPIMLRGNDVA 498 Query: 579 DLIVYLGSIDFVMSDVD 595 D + + SID S D Sbjct: 499 DAPLIIASIDPCFSCTD 515 >UniRef50_C5A3D4 Formate hydrogenlyase I subunit F (Mhy1F) n=2 Tax=Thermococcus RepID=C5A3D4_THEGJ Length = 601 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 149/582 (25%), Positives = 240/582 (41%), Gaps = 57/582 (9%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGMDERL 80 + E F + G + I RE L + + P+ L G DER Sbjct: 40 LKEFYEAFKEHIRECKRMTYGQYMFVIDREVLPDAVLWWHNHPEFKETHLSTAVGTDERP 99 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 + +V ++D N + LK + +D P+ P A W ERE DL Sbjct: 100 LNGKFVY-MPFLNVQVEPQNMDENYWVFLKAYMPADDPSFPSVAAKLPAALWIEREVKDL 158 Query: 141 FGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 G GHP+ RR+++P+ W +PLRKD R + + + + Sbjct: 159 LGFNPVGHPDPRRLILPEDWPEGVYPLRKDMDYRHSPMAEVKTEYRETPE---------- 208 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 + +GP H L + GEEIVD Y HRG EK GE Sbjct: 209 -----------GTTLVPMGPVHAGIEEPAHFRLFVKGEEIVDVDYRGFYSHRGIEKTGEG 257 Query: 259 Q-SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 + +++ + +RI + G + + Y +AVE+LA + +PDR IR ++ EL RI++HLL Sbjct: 258 RLTYNQVLFLAERICGICGYQHSVSYAMAVERLADVDIPDRARYIRTLMLELERIHNHLL 317 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 ++ VG T A+ R+ + LVE +TG R +GGV D+ + Sbjct: 318 WVGIAAHLVGYDTGFMHAWRIREPVMWLVERLTGNRKQYGMNIVGGVRRDILDYRKEEIL 377 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 + + + + + AL R++GV K A + G RA+G D R Sbjct: 378 KVVKQIREETKKFLDIALNTNTFIKRAEGVGILPYKVAKAYSVLGPTARASGRRIDTRLD 437 Query: 438 RPY---SGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHP 494 + Y DF++PV D RV+++++EL +SL I+EQ ++ MP G Sbjct: 438 QATKTAMAYNEVDFKVPVYKE-GDVLARVLVRMDELFESLWIVEQLIDQMPGGDIM---- 492 Query: 495 LTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYR 554 V G + E+ EA +G +Y+ + YR Sbjct: 493 -----------------------VPIGDLPEYEEALGFTEAHRGEVVHYVMTGEKNKVYR 529 Query: 555 TRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +VR P++ +L +P ++G V+D + + SID S +R Sbjct: 530 WKVRAPTYNNLPAVPEMLKGYHVADAPLIIASIDPCYSCTER 571 >UniRef50_Q5LH50 NADH-quinone oxidoreductase subunit C/D n=34 Tax=Bacteroidetes RepID=NUOCD_BACFN Length = 530 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 161/556 (28%), Positives = 260/556 (46%), Gaps = 29/556 (5%) Query: 43 VPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE-RLRTHREGLPAADFSVFYHLISI 101 + +I+ L + L+ K L L GMD V YHL S Sbjct: 2 EEIKYIEPAALHDEMLRLRN-EKQMDFLESLTGMDWGVADEGDAPNVTRGLGVVYHLEST 60 Query: 102 DRNRDIMLKVALA-ENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW 160 I +K + +P+ + ++ A++ ERE +D +GI F GHP++RR+ + W Sbjct: 61 VTGERIAIKTSTNNRETPEIPSVSDIWKAADFNEREVFDYYGIVFIGHPDMRRLYLRNDW 120 Query: 161 KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNH 220 GHP+RKD + + L + ++ +N+GP H Sbjct: 121 VGHPMRKDNNPEKDNPLRMDNEETYDTTREIELNPDGTYQTQENVIFDDREYVVNIGPQH 180 Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 P+ HG R + L+GE I + GY HRG EKM E ++ + TDR++YLG N Sbjct: 181 PATHGVMRFRVSLEGETIKKLDANCGYIHRGIEKMNESLTYPQTLALTDRLDYLGAHQNR 240 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQ 340 + +EK GI V +RV IR ++ EL RI+SHLL+ S D+GA+T F+ F DR+ Sbjct: 241 HALCMCIEKAMGIEVSERVKYIRTIMDELQRIDSHLLFYSCLAMDLGALTAFFYGFRDRE 300 Query: 341 KIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTIL 400 I D+ E G R+ + IGGV DL + +++F+ ++ + Y N I Sbjct: 301 MILDMFEETCGGRLIMNYNTIGGVQADLHPNFIPRVKKFIPYLRGIIHEYHDVFTGNVIA 360 Query: 401 KGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCY 460 + R +GV ++A+ +G TG RA+G DVRK PY Y+ DF+ V D + Sbjct: 361 RQRLKGVGVLSREDAISFGCTGGTGRASGWACDVRKRMPYGVYDKVDFKEIVYTE-GDSF 419 Query: 461 TRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSW 520 R M++++E+ +SL I+EQ ++N+PEGP + ++ Sbjct: 420 ARYMVRMDEIMESLNIIEQLIDNIPEGPIQ-------------------------EKMKP 454 Query: 521 GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDL 580 +P + +E ++G +L S G YR R+ + + RG+ ++DL Sbjct: 455 IIRVPEGSYYTAVEGSRGEFGVFLESHGDKTPYRLHYRSTGLPLVSAVDTICRGAKIADL 514 Query: 581 IVYLGSIDFVMSDVDR 596 I G++D+V+ D+DR Sbjct: 515 IAIGGTLDYVVPDIDR 530 >UniRef50_Q1PZL4 Similar to membrane-bound [NiFe]-hydrogenase-3, large subunit (Chain E) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZL4_9BACT Length = 531 Score = 478 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 137/576 (23%), Positives = 231/576 (40%), Gaps = 57/576 (9%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLR 81 I +L +F + ++ V K+E LL V ++K + +L + DER Sbjct: 10 IDKLSGQFKGNITISRSFLENEIYVSTKKENLLNVCLYIKDIFN--AVLSSMICNDERTL 67 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 F ++Y + +++ + ++E P+ T P A+WYERE D+F Sbjct: 68 -------DKHFKIYYVFSLQREDTFLIVTIPVSEQQPEFPSITPQIPAAHWYEREIKDMF 120 Query: 142 GITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEE 199 G+ GHP +++ + +PLRKD+ + E Sbjct: 121 GLIPVGHPRPETLVLHGNFPENTYPLRKDFDIQTRIP-------------------HLES 161 Query: 200 WGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ 259 E E + +GP H G+ I + + H+G EK+ E Sbjct: 162 KLPFFRVEGEGVFEIPVGPIHAGVIEPGHFRFSAVGDSIFYLDAKLFFTHKGTEKIFETM 221 Query: 260 SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYI 319 + + +RI + + Y A+EK+A I +P R IR ++ EL RI +H+ + Sbjct: 222 PYTKALFLAERICGVCAASHATGYCQAIEKVAEIEIPPRARFIRTIVMELERIYNHIGDV 281 Query: 320 STFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREF 379 + + F R+ + L E ITG R IGGV D+ ++ + Sbjct: 282 GNICAGTAFLLGIAHGFRIREYLQQLNETITGNRYLRGMLAIGGVRFDINDDLEKHILSL 341 Query: 380 LDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARP 439 L+ + K K +++ L R + + A G G RA+GI D R P Sbjct: 342 LNHVKKDFKDLTKMMFKSSSLLDRLETTGRLSEEIARGLGVVGVAARASGIVQDTRVNHP 401 Query: 440 YSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 Y+ YE DF+IPV D R+ ++V+E+ QS+ I+EQC M GP K Sbjct: 402 YAAYEEVDFDIPVFHYEGDVLARIRVRVDEVYQSIYIIEQCFEKMRPGPLKT-------- 453 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 + P ++ +E+ +G N Y++ + +R +VR+ Sbjct: 454 -------------------PIKELPPYKQALSYVESPRGENIYWIMTAPGNKLFRYKVRS 494 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 PSF + IP A+ G++V D + S + S D Sbjct: 495 PSFCNWPAIPFAVPGNIVPDFPLINKSFELCYSCTD 530 >UniRef50_B5YKR2 Hydrogenase-4 component G n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKR2_THEYD Length = 541 Score = 478 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 146/568 (25%), Positives = 250/568 (44%), Gaps = 61/568 (10%) Query: 32 DAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAAD 91 + T +V+ K Q+ EV L + L +D + ++ Sbjct: 10 NITDKVETTDENLIVYSKPSQIKEVAKLLVMQGARFAHL---TAIDFINQKNQ------- 59 Query: 92 FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNL 151 + Y ID + ++++K+ L ++L + + +++ P W ERE DLFGI F+GHP+ Sbjct: 60 IELNYFFSLIDDSMNVIVKIPLEASELSISSISEIIPAVIWSERECNDLFGINFEGHPDP 119 Query: 152 RRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENE 209 RR+++P W HPLRK++ + + K+ E + + Sbjct: 120 RRLVLPDNWPQEVHPLRKNFSYNSKPPESKQPAPLKKPEEGKTV---------------- 163 Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER-QSWHSYIPYT 268 + +GP +PS L +DGEEI D Y HRG EK+ E ++ Sbjct: 164 ----IPIGPFYPSLEEPAYFRLIVDGEEIADFDYRGFYVHRGIEKLAESVLNYQQIPFLA 219 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +RI + G V+ Y AVEK AGI +P R IR + EL R++SHLL++ VG Sbjct: 220 ERICGICGFVHSCAYCQAVEKAAGIEIPLRAKFIRSLFLELERLHSHLLWVGLAAHIVGF 279 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T A+ R+ + + E ITG R +GGV D+ + + + + + K + Sbjct: 280 DTLFMQAWRIREPVMYICEIITGNRKTYGINIVGGVTIDVHNQHLKDIDKVISQIEKEVR 339 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 + L + +++ R + V +A ++ G R +GI+ D+R PY+ Y + Sbjct: 340 ELREIILDDEVIQLRFKNVGVLKYDDAKKYCVCGPVARGSGINIDMRTNFPYAAYPMLNI 399 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 IP+ D + R ++++EE+ S+ I+ Q L N+PEGP Sbjct: 400 RIPL-NKSGDVWARTIVRLEEILISINIIRQILENIPEGPTSIKISK------------- 445 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI 568 + P E+ IEA +G +Y+ + YR VR PS+ + Q + Sbjct: 446 --------------IEPWKEAVSYIEAPRGQLFHYVMTGPEGRPYRWSVRAPSYQNYQAL 491 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++G+ ++D + +GSID S +R Sbjct: 492 SVMLKGASIADAPLIIGSIDPCFSCTER 519 >UniRef50_Q2RXM4 NADH-ubiquinone oxidoreductase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM4_RHORT Length = 561 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 138/581 (23%), Positives = 240/581 (41%), Gaps = 56/581 (9%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 ++ ++ RF A + + E + + ++ K + + G+ Sbjct: 5 QTILDDINARFPGCVTRGLAPQPDRLYLRTTTEHIRTLAAYVFNDLKGRL----VTGV-- 58 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 G ++ + Y + L D VPT T L P A+W+ERE + Sbjct: 59 ---CTDMGPVTGEYDIIYAFSLDAEGILLTLTEPTDPKDPKVPTLTDLIPGADWHERENY 115 Query: 139 DLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 D+ G+ +GHPN RR+++ + W P+RKD+P ++T +D Sbjct: 116 DMLGVVAEGHPNPRRLLLSEDWPEDLFPMRKDFPHDFKPPKAEKITTPLRDPLG------ 169 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 +++GP P+ L +GEEI+ + HRG EK+ Sbjct: 170 ----------NESKATIISVGPFFPTLDEPAYFRLFCEGEEIIGSDYRGFFSHRGIEKLS 219 Query: 257 ER-QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH 315 + ++ +R+ + G V+ Y +AVE AGI +P R IR ++ EL R++SH Sbjct: 220 DTVLDYNQVPFMAERVCGICGFVHSACYCMAVEDAAGIEIPPRAKYIRSIMMELERLHSH 279 Query: 316 LLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL 375 LL++ +G T + ++ R+ I LVE ITG R +GGV DL Sbjct: 280 LLWLGLAGHYLGFDTVLMQSWRIREPIMWLVEEITGNRKTYGMNLVGGVRRDLDSAICDK 339 Query: 376 LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR 435 + + + A + LK R V ++A G RA+G+ D R Sbjct: 340 IMAAVTKIGIECEELISAVAGDESLKMRMVKVGVLSHEDARGICVVGPTARASGVHIDAR 399 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPL 495 PY+ + + DF+ P D + R +++V+E+R S+ +++Q + +PEG A Sbjct: 400 ADYPYAAFPDLDFK-PSFHEGGDIWARTLVRVDEVRSSVDLIKQMITKLPEGEIMA---- 454 Query: 496 TTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT 555 +GP+ E + + EA +G +Y+ + YR Sbjct: 455 -----------------------GFGPIPAWREGYGIAEAPRGECVHYVQTGKDNRPYRW 491 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 RVR ++ LQ +P ++G + D + +GSID S +R Sbjct: 492 RVRAATYPQLQAVPLMLKGMSIGDFPIIIGSIDPCFSCTER 532 >UniRef50_P16431 Formate hydrogenlyase subunit 5 n=104 Tax=Bacteria RepID=HYCE_ECOLI Length = 569 Score = 471 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 138/588 (23%), Positives = 237/588 (40%), Gaps = 58/588 (9%) Query: 14 RDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDL 73 + L + L F V +K L EV +FL + L L Sbjct: 3 EEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGW--LSVL 60 Query: 74 HGMDERLRTHREGLPAADFSVFYHLISIDRN--RDIMLKVALAENDLHVPTFTKLFPNAN 131 G DER Y+++S+++ I ++V + N P+ T P A Sbjct: 61 FGNDERKL--------NGHYAVYYVLSMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAV 112 Query: 132 WYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLE 189 W ERE D++G+ G P+ RR+++P W +PLRKD Sbjct: 113 WGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQR-------------- 158 Query: 190 MEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHH 249 A T E + ++ + +GP H ++ L +DGE I+D + Y H Sbjct: 159 -PAPTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVH 217 Query: 250 RGAEKMGERQS-WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSE 308 RG EK+ E + ++ +DR+ + G + Y +VE GI VP+R +IR +L E Sbjct: 218 RGMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLE 277 Query: 309 LFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDL 368 + R++SHLL + G + F R+ + E +TG R IGG+ DL Sbjct: 278 VERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDL 337 Query: 369 PRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRAT 428 + R+ M + + L ++ R+ G+ + A ++ G +RA+ Sbjct: 338 LKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRAS 397 Query: 429 GIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGP 488 G D R P+ GY E+ D +R+ +++ E+ +L +++ L+N+P GP Sbjct: 398 GHARDTRADHPFVGYGLLPMEV-HSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGP 456 Query: 489 FKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDG 548 + +P + EA +G + ++ + Sbjct: 457 LMVEGF---------------------------TYIPHRFALGFAEAPRGDDIHWSMTGD 489 Query: 549 STMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + YR R R ++A+ + +RG+ VSD + +GS+D S DR Sbjct: 490 NQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537 >UniRef50_C9LCY9 NADH dehydrogenase I, C/D subunit n=9 Tax=Bacteroidales RepID=C9LCY9_9BACT Length = 558 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 166/564 (29%), Positives = 264/564 (46%), Gaps = 39/564 (6%) Query: 35 TVQATRTGVPVV-WIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFS 93 T + ++ E L LK + L L GMD Sbjct: 32 TETKPAENELQLHYLAPEDLHAEMQRLKDEEH-FDFLETLTGMDW---------GEDGLG 81 Query: 94 VFYHLISIDRNRDIMLKV-ALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLR 152 V Y+L S +N+ I LK + +PT + L+ AN YERE +D FGI F GHP++R Sbjct: 82 VVYNLWSTTQNKRISLKTATTDRENPFLPTVSDLWNIANIYEREVFDFFGIKFLGHPDMR 141 Query: 153 RIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFM 212 RI + + W G+P+RKD E + D+ + + ED Sbjct: 142 RIFLREDWNGYPMRKD-DKPEEENPLRMDNEPLADVTTQYDRPDGSITTKENTIFTEDDY 200 Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 +N+GP HPS HG + L+GE I P +GY HRG EK+ E ++ + T+R++ Sbjct: 201 VVNIGPQHPSTHGVLHFRVALEGERIRKIDPILGYIHRGIEKLNESLTYPQTLALTERLD 260 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 YLG N + +EK AGI V +RV IR ++ E RI+SH+L+ S QD+GA + Sbjct: 261 YLGAMQNRHALCMCIEKAAGIEVSERVQYIRTIMDEFQRIDSHILFFSCLCQDMGATSAF 320 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 + F DR++I D+ E G R+ + IGGV D+ + R ++EF+ +M L Y Sbjct: 321 LYGFRDREQILDIFEETCGGRLILNYNTIGGVMADIHPNFVRRVKEFIPYMRHNLQEYYD 380 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 + N I R +GV ++ + +G TG RA G D+RK +PY+ Y+ DF+ Sbjct: 381 IFVNNVIAHNRLEGVGVLNKEQVISFGCTGGTGRAAGWSNDLRKHQPYAAYDKVDFQEIT 440 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 D + R+M++++E+ +SL+I+EQ ++ +PEGPF+ Sbjct: 441 YTE-GDSFARLMVRMKEIEESLKIIEQLIDGIPEGPFQTK-------------------- 479 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 +PA + +E ++G L S G R R+ + + Sbjct: 480 -----TKPIIKIPAGTYYSAVEGSRGEFGVLLESKGDKFPSRLHYRSTGLPLVAAMDTIC 534 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 R + ++DL+ G++D+V+ D+DR Sbjct: 535 RDNFIADLMAIGGTVDYVVPDIDR 558 >UniRef50_B7R5K6 Hydrogenase-4 component G n=1 Tax=Thermococcus sp. AM4 RepID=B7R5K6_9EURY Length = 545 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 156/557 (28%), Positives = 243/557 (43%), Gaps = 63/557 (11%) Query: 43 VPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISID 102 V V + E++ E+ L Y G+DER P YH+ + + Sbjct: 18 VTVAEVSPERVREIAKGLFNAGCYY---SCGMGVDER--------PVNMRFAMYHVFNCE 66 Query: 103 -RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 R ++LK+ N+L +P+ T + A+W ERE D+ GI F+GHP R+++P+ W Sbjct: 67 AERRHVILKLTTPTNELTLPSITPVIEGASWSEREAMDMLGIIFEGHPEPERLILPEDWP 126 Query: 162 G--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPN 219 +PLRKD+P K+ D + + LGP Sbjct: 127 EGVYPLRKDFPYNKKLPPAKPKEGRKKPRP--------------------DIIEVPLGPY 166 Query: 220 HPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ-SWHSYIPYTDRIEYLGGCV 278 HP+ H L + G++IVD + HRG EK+ E + + + +RI + GC Sbjct: 167 HPTLHEPEYFELYVKGDKIVDAKYRGFHIHRGMEKLAESRMTLNQVPFLAERICGICGCT 226 Query: 279 NEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTD 338 + Y AVE I VP+R IR ++ E+ R++SHLL+ +G + + Sbjct: 227 HSTAYCQAVEDATNIYVPERARYIRTIMLEVERLHSHLLWFGVACHLLGFDSGFMHLWRA 286 Query: 339 RQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNT 398 R+ I D+ E ITG R IGGV D+P R + E LD K ++ Sbjct: 287 REYIMDIAELITGNRKTYGINLIGGVRRDIPEEKKRKVLELLDLAEKDSREILDNVVKMG 346 Query: 399 ILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSD 458 LK R + V K+ E G G RA+GID DVR+ PY+ Y + DFE+PV G D Sbjct: 347 ELKERMENVGVLPKKKGREIGVVGPVARASGIDTDVRRDHPYAAYGDLDFEVPVYKGE-D 405 Query: 459 CYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQV 518 +R +++ +E QS ++ Q L+NMPEG + I F Sbjct: 406 VLSRFLVRYDETFQSFSMIRQALDNMPEGELINED----------------YEIPGFKL- 448 Query: 519 SWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVS 578 + EA +G + + + + G YR R ++ +L +P +RG+ ++ Sbjct: 449 ----------GLGVTEAPRGEDVHVVITWGENKVYRWHPRASTYNNLPAVPVMLRGNDIA 498 Query: 579 DLIVYLGSIDFVMSDVD 595 D + + SID S D Sbjct: 499 DAPIIIASIDPCFSCTD 515 >UniRef50_A1RZ40 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ40_THEPD Length = 537 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 143/551 (25%), Positives = 243/551 (44%), Gaps = 49/551 (8%) Query: 46 VWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNR 105 V + E + E L + + Y L + +D + YH R Sbjct: 10 VQVPPEGIREAVRRL--VAEGYAHLTAITAVD----------LQDSIELIYHFDGGGGYR 57 Query: 106 DIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPL 165 + +K L + +P+ ++ P A++YE+E DLFG+ F RR ++P+ + Sbjct: 58 HVSVK--LPRANPTLPSIAQVVPGADYYEKEVRDLFGVNFQDGAEKRRFILPECYP---- 111 Query: 166 RKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHG 225 A ++ A + + + + + + +GP HP+ Sbjct: 112 -----PDAPPPLLKDVDPASVKALVAEAPTCQVDAVGLHAPLSPESVVVPVGPYHPAFKE 166 Query: 226 AFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVL 285 L +DGE IV IG+ HRG EK E +S+ I +RI + + +V Sbjct: 167 PEYFSLVVDGERIVKAFVRIGFVHRGIEKAAESRSFFRDIFLVERICGICSTSHAWCFVE 226 Query: 286 AVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDL 345 AVE+L + VP R +R +++EL RI+SH L++ G T + + R+ I DL Sbjct: 227 AVERLLNMEVPRRAAYLRTLVAELERIHSHALWLGLVGYWTGFETMFMWVWGLRETIMDL 286 Query: 346 VEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQ 405 +E I+G R+H ++ IGGV D+P R + E ++ + S ++ + + R++ Sbjct: 287 LEEISGNRVHKSFVTIGGVRRDVPDALLRRVSERVETFRREFESLLESLSYSEEIISRTK 346 Query: 406 GVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVML 465 G+ Y +A ++ G RA G FDVR+ PY Y +FE+P D Y + + Sbjct: 347 GIGRYSLDDARKYCAVGPVRRAAGDPFDVRRIEPYGAYPEVEFEVPT-SNEGDVYNLIRV 405 Query: 466 KVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMP 525 +V+E+ +S I++Q + MP G PPK +P Sbjct: 406 RVKEVVESASIIQQLVEKMPSG--------NPVPPKPFMGT-----------------VP 440 Query: 526 ANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLG 585 E++ IEA +G YY+ ++ + YR +VRTP+ A++Q + G +SD V + Sbjct: 441 EGEAYSRIEAPRGELFYYVKANNTHNPYRVKVRTPTLANIQLAAKILEGQTLSDFPVVVT 500 Query: 586 SIDFVMSDVDR 596 SID S +DR Sbjct: 501 SIDPCFSCMDR 511 >UniRef50_B0R3U3 NADH dehydrogenase-like complex subunit CD n=16 Tax=Halobacteriaceae RepID=B0R3U3_HALS3 Length = 562 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 170/578 (29%), Positives = 277/578 (47%), Gaps = 52/578 (8%) Query: 27 NRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREG 86 D + P I+ + + +V LK + L + Sbjct: 29 EALIEDHVLEREDHLNAPGFVIRADAVQDVLSTLK-TEAGFDHLSCVTA----------E 77 Query: 87 LPAADFSVFYHLISIDRN-RDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITF 145 F YHL D +++ + V + ++ T +F A+W+ERE +DL G+ + Sbjct: 78 EHEDRFESIYHLRKYDDPTQEVSIIVPTSRDNPVSETAEPVFRTADWHEREAYDLVGVEY 137 Query: 146 DGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRG 205 D HPNL RI++P TW+GHPL DY + F+ K G ++ Sbjct: 138 DDHPNLERILLPDTWQGHPLGLDYNQNKPQIVTFDEHK-------------NPLEGHEQA 184 Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW-HSY 264 ++ D MFLN+GP+HP+ HG + LDGE++ D PDIGY HR E+M ++ ++ H Sbjct: 185 ADDSDTMFLNIGPHHPATHGVLHVETVLDGEQVADVNPDIGYLHRCEEQMAQKGTYRHQI 244 Query: 265 IPYTDRIE-YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI 323 +PY DR + GG +NE Y E LA I VP+ ++R M EL RI H+L + TF Sbjct: 245 MPYPDRWDYGPGGILNEWAYARTAEDLADIDVPEYAQILRTMGGELCRIACHMLALGTFC 304 Query: 324 QDVG--AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPR---GWDRLLRE 378 D+ +A DR+ + +++E +TG RM + R+GGV D+P + +R+ Sbjct: 305 LDIYGDFTAIFMYAMRDREVVQNILEDLTGQRMMLNYLRLGGVVWDIPEPRAEFFESVRD 364 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 FLD +P+RL Y N I + R+ + A ++G TG R +G+D+DVR+ Sbjct: 365 FLDELPERLDEYSDLITSNEIFQARTVNTGVLDYETAKDYGVTGPVARGSGVDYDVRRDD 424 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY Y D+++ V D Y+R+++++EE+ QS RI+EQC++ + P Sbjct: 425 PYGYYPELDWDV-VTEDGGDNYSRLLVRMEEVEQSARIIEQCVDLLEGWPEDERDIQANV 483 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 P + E+++ +E KG Y+ +DG+ R ++R Sbjct: 484 PRTLKPEAGT-------------------ETYRTVEGAKGELGVYIRADGTEKPGRFKIR 524 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P F++L + G + DL+ LGS+D ++ +VDR Sbjct: 525 SPCFSNLSALKEMSTGEYIPDLVATLGSLDVILGEVDR 562 >UniRef50_A1ASR5 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR5_PELPD Length = 557 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 145/579 (25%), Positives = 235/579 (40%), Gaps = 59/579 (10%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFL-KKLPKPYVMLFDLHGMDERL 80 + +L+++FG +V+I + + ++ + + YV Sbjct: 6 LQQLKDKFGSAIQQADVVNDMRLLVYIDPASVKPICQYIFRDMDARYV----------IS 55 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 + + F VF+ + L + + + + + P ANW ERE DL Sbjct: 56 IGSDDRPYSGKFLVFHQFAFDKEKILFSIICQLPGENPRIDSISGIIPAANWAERELKDL 115 Query: 141 FGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 GI GHP +R+++P W HPLRKD+ E + D Sbjct: 116 LGIEPVGHPYPKRLVLPDAWPDGHHPLRKDFAWNKIPEGYDEEREFDFDETPP------- 168 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 + GP HP+ L +DGE + C HRG EK+ E Sbjct: 169 -----------GCTAVPFGPFHPTLDEPEHFRLYVDGEFVRGCEYRGFMVHRGIEKLSES 217 Query: 259 -QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 ++ +RI + GCV+ + + AVE AG+ VP R IR ++ E+ R++SH + Sbjct: 218 VLGYNDVPMMAERICGICGCVHSLAFCQAVENGAGVIVPPRAEFIRTIMLEIERLHSHPM 277 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 ++ VG T A+ R+ I L E ITG R IGGV D R Sbjct: 278 WVGLACHLVGFDTLFMQAWRIREPIMWLAEKITGNRKTYGLGIIGGVRWDFTPELIAETR 337 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 LD + A ++ + R+ GV E G G R G+D D R+ Sbjct: 338 AVLDKLESEWRQVVAAVSKDKNIMARTSGVGMADKALCKEMGLVGPVARGGGVDIDARRD 397 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 PY+ Y+ DF++ + +D + RV++++ E+ +S+ I+ QC + MP+GP AD Sbjct: 398 HPYAAYDRVDFKV-ITHNTADVWGRVVVRMLEVFESINIIRQCFDKMPQGPLVADITTEL 456 Query: 498 PPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV 557 P + + IEA +G + ++ + R R Sbjct: 457 PAGRV--------------------------GYTSIEAPRGESHHFAITGDDNRPRRWRA 490 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R P++ +LQ IPA I+ ++D+ + LG ID MS DR Sbjct: 491 RAPTYQNLQGIPAMIKDQRIADMQISLGGIDPCMSCTDR 529 >UniRef50_A3DNE9 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=2 Tax=Desulfurococcaceae RepID=A3DNE9_STAMF Length = 548 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 130/581 (22%), Positives = 239/581 (41%), Gaps = 65/581 (11%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 D V + + G + ++ I R L + D + Y + +DE Sbjct: 6 DSVRQHIIEKLGDIVKETKYIGDQALMLRIDRNYLRKAVDIIHNDLNAY--FRTMVAVDE 63 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R F+ +Y + +I++K + ++ +P+ + P A+WYE E W Sbjct: 64 RSLN-------GTFASYYIFGLDAAHLNIIVKTHTSADEPVLPSIIDIVPAADWYELEAW 116 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 DL GI F+ + R ++P W + + + Sbjct: 117 DLLGIKFENR-KVHRFVLPDEWP----------------------EGIYPLRKDVEYTYR 153 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE- 257 K + + +GP HP+ H L ++GE++VD + + HRG EK+ E Sbjct: 154 PKPRKVPRQPPTGQRIPIGPYHPALHEPEYFELYVEGEKVVDVEYNGFHVHRGIEKLAEA 213 Query: 258 -RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 R ++ +RI + G V+ + Y ++VE+ A I VP+R IR ++ E+ R++SHL Sbjct: 214 PRFNYQKIPFLAERICGICGFVHSVSYTMSVERAAKIDVPERAEYIRSIILEIERLHSHL 273 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 L+I +G + R+K+ L E +TG R +GGV D+ + Sbjct: 274 LWIGVVCHLLGYDAGFMHTWRIREKVMVLAELLTGSRKTYGINLVGGVRKDINMDKIEAV 333 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 + ++++ + + R+ G +A + G R +G+D DVR+ Sbjct: 334 KNTIEYIRSEFKHLSDLITSISQIVKRASGTGILSRDDARKLSVVGPVARGSGLDRDVRR 393 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 PY+ Y + F++PV D R++++++E+ +S+ ILEQ ++ +P GP A Sbjct: 394 DYPYAAYRDVYFKVPVYNE-GDNLARLLVRIDEVFESIYILEQLIDKLPGGPIMA----- 447 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPAN-ESFQMIEATKGINSYYLTSDGSTMSYRT 555 +P +EA +G + +T G YR Sbjct: 448 -----------------------EKLEVPEGVIGIGNVEAPRGEVIH-VTITGHGRPYRW 483 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 RVR P++ ++ + +R + ++D + + SID S DR Sbjct: 484 RVRAPTYQNIPALKIMLRDAPLADAPLTIASIDPCFSCTDR 524 >UniRef50_Q0W2B9 Hydrogenase, large subunit-like protein (HycE-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B9_UNCMA Length = 524 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 139/579 (24%), Positives = 241/579 (41%), Gaps = 61/579 (10%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 + E+ FG + + + V V ++ L V F+ K + L LH D Sbjct: 4 KNITNEITAAFGEEMASARDVGNNV-FVRAGKDALPYVASFVAK--RYGASLATLHVADT 60 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 R T ++++ + N + ++ + E+ + T + +ANW+ERE Sbjct: 61 RQMT-------GGYTMYAVMPVASENLIVSIEAEVPESPGTFQSLTPMIYSANWFEREIA 113 Query: 139 DLFGITFDGHPNLRRIMMPQTWK--GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 D+FG+T GHP+LR +++ TW HPLRKD P R + + Sbjct: 114 DMFGLTPVGHPDLRPLVLYDTWPEDYHPLRKDAPGRPPKVDTY----------------- 156 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 E E + +GP H + GE ++ +GY H+G EK+ Sbjct: 157 ----YPYHRVEGEGVFEIPVGPVHAGVIEPGHFRFSVAGEPVLMLEIRMGYVHKGIEKIS 212 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 E ++ + ++R G + Y AVE+LAGI VPDR IR + E+ RI +HL Sbjct: 213 ESMTYDKGVFLSERTSGDNGMAHSTAYCQAVEQLAGIEVPDRARYIRTVFLEMERIYNHL 272 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 + D A+ R+++ L E ITG R+ + +IGGV DL R + Sbjct: 273 GDVGGISLDTAYNVGAQHAYILRERMLQLNECITGSRLLRSVNKIGGVRQDLTREDIEKI 332 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 R + + + T + R++ + A+ G G RA+G+ DVR+ Sbjct: 333 RTAIIKAKLDFKDFVDLVNRQTSILDRTETTGKLPLEAAVSLNIVGPGARASGVSRDVRR 392 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 PY+ Y + +F + + D R+ +K+ E+ +S+ I+EQ L+ +P G +A Sbjct: 393 DHPYAAYSDLNFAVHI-RKEGDVNARMQVKIGEIYESMSIIEQALDRLPAGKIRA----- 446 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 + G + ++EA +G +++ S + +R + Sbjct: 447 ----------------------ATGNIPQGRVGISLVEAPRGELLHWILSGENDRPFRHK 484 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +R PSF + + A G++V D + S + S D Sbjct: 485 IRDPSFCNWLAMEIATPGNIVPDFPLVNKSFNLSYSGND 523 >UniRef50_B1ZSF2 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSF2_OPITP Length = 531 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 127/578 (21%), Positives = 216/578 (37%), Gaps = 56/578 (9%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDER 79 PV EL+ RF V A++ + E + L + L + D R Sbjct: 9 PVFDELQQRFEGQLQRVDASQPDELHLHAPLELASALCSTLYRKSGG--RLVSVFAEDGR 66 Query: 80 LRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWD 139 A F V+Y + ++++V + + + T NW ERE D Sbjct: 67 AG-------GAGFYVYYLYAVDAAHGFVLVRVVVPAERPELISLTNAVHAVNWQEREIQD 119 Query: 140 LFGITFDGHPNLRRIMMPQTWKG-HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 LFG+ GHPN RR ++ W PLRKD+ + +++ E Sbjct: 120 LFGLKLVGHPNPRRCVLHDDWPEVFPLRKDFDLQTQLPPFSGERHKFREVAGE------- 172 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 + +GP H + + GE ++ + Y H+G EK+ E Sbjct: 173 -----------GVFQVPVGPVHAGVIEPGHFLFSVAGEPVLYLQLRMFYVHKGTEKLFES 221 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY 318 + + I + + A+E+ AG+ P R +R + EL RI++H+ Sbjct: 222 LPITHGVRLAESISGDSAFAHATAFCHAIERAAGVAAPPRGRALRTLCLELERISNHVAD 281 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 I DV +T A ++++ E +TG R+ +GGV D L Sbjct: 282 IGAICTDVAFVTAQMHALRLKEQVLRWNEQLTGNRLLRGMACLGGVRFDFDSAQLDALAA 341 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 F+D + ++ + ++ + R + A + G G RA+GID D+R+ Sbjct: 342 FVDTLEQQFKDLVELIRSHSGTRDRLETTGVLAPAVARDLGIVGIAGRASGIDHDLRRDC 401 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 P Y+ F +PV D R++++ EEL QSL I+ Q L MP G Sbjct: 402 PTDFYDQVQFTVPVFTE-GDVQRRMVVRREELFQSLGIIRQVLAKMPGGAIAT------- 453 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 G V + +E +G +++ + R +++ Sbjct: 454 --------------------PVGDVPADRIALGYVEGWRGEIFHWVHTAPGNRLARCKIK 493 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PS + + AI G+++ D V S + S DR Sbjct: 494 DPSLQNWPALSEAILGNIIPDFPVVNKSFNLSYSGTDR 531 >UniRef50_O75306 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial n=570 Tax=cellular organisms RepID=NDUS2_HUMAN Length = 463 Score = 441 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 163/435 (37%), Positives = 243/435 (55%), Gaps = 3/435 (0%) Query: 164 PLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDF--MFLNLGPNHP 221 P R + + A E +KP W ++ + LN GP HP Sbjct: 30 PSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKDTIVKNITLNFGPQHP 89 Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEM 281 +AHG R+V++L GE + C P IG HRG EK+ E +++ +PY DR++Y+ NE Sbjct: 90 AAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQ 149 Query: 282 PYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQK 341 Y LAVEKL I P R IRV+ E+ R+ +H++ ++T D+GAMTP F+ F +R+K Sbjct: 150 AYSLAVEKLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREK 209 Query: 342 IYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILK 401 +++ E ++G RMH A+ R GGV DLP G + +F RL E+ N I + Sbjct: 210 MFEFYERVSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWR 269 Query: 402 GRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYT 461 R+ + A+EAL +G +G LR +GI +D+RK +PY Y+ +F++PVG DCY Sbjct: 270 NRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSR-GDCYD 328 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWG 521 R + +VEE+RQSLRI+ QCLN MP G K D +PP + +E+LI HF + G Sbjct: 329 RYLCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEG 388 Query: 522 PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLI 581 +P ++ IEA KG YL SDGS+ YR +++ P FAHL + +G +++D++ Sbjct: 389 YQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVV 448 Query: 582 VYLGSIDFVMSDVDR 596 +G+ D V +VDR Sbjct: 449 AIIGTQDIVFGEVDR 463 >UniRef50_C8W240 Hydrogenase, large subunit-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W240_DESAS Length = 525 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 123/575 (21%), Positives = 223/575 (38%), Gaps = 58/575 (10%) Query: 23 GELRNRFGPDAFTVQ-ATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLR 81 EL++ D + + +E LK L + G+DER Sbjct: 8 KELQDEQNCDILQFTTELAIRTIKLGVPAASFMETVKRLKAEGA---YLLTMTGVDERDY 64 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 FSV+ + K+ L + + + + P+A+W ERE D+ Sbjct: 65 N-------GHFSVYSVFGLPGDTTLVETKIVLNAENPTFTSISPVMPSAHWLEREIKDML 117 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWG 201 GI GHP+LRR+ + W + +P R + ++ + + +++ + + Sbjct: 118 GIVPYGHPDLRRVAVHPDWP----QDVFPMRKDFIAGRQVPRVQGEMQFCKVEGE----- 168 Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 + +GP H GE++++ + Y HRG EK E + + Sbjct: 169 --------GLYQVPVGPVHAGIIEPGHFRFFTFGEDVINLQAQLFYTHRGIEKTAEGKHF 220 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 + +R+ + + + Y A+E LAGI P R IR +L E+ R+ +H+ I Sbjct: 221 LDAVLVAERVCGVCSASHAVSYAQAIESLAGINAPLRARYIRTVLLEMERLYNHVGDIGN 280 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 +G + ++++ + + G R GGV DL + LD Sbjct: 281 MCAGIGFSFGISRGAELKERLMRMNMKLAGHRYLRGTVVPGGVKIDLKDT--EGIGRALD 338 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + + L L + L R Q A + G TG RA+G++ D+R+ PY+ Sbjct: 339 TVKRELKELTDTMLSSQSLLDRMQTTGVLPTDAARDLGATGPAARASGVNRDLRREFPYA 398 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y F++P+ D Y R++ ++EE QS I+ Q NN+P G +A Sbjct: 399 AYRRVSFQVPIQHE-GDVYCRLIQRIEESEQSFDIIRQVFNNLPAGELQA---------- 447 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 + P + + E+ +G N +++ S YR VR+ S Sbjct: 448 -----------------PITYLQPYHTAVGYTESARGANVHWVMSGPDNTVYRYMVRSAS 490 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + +P + G++V D + S + + +DR Sbjct: 491 HCNWPVVPLCLPGNIVPDFPLINKSFELCYACLDR 525 >UniRef50_P77329 Hydrogenase-4 component G n=130 Tax=Bacteria RepID=HYFG_ECOLI Length = 555 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 139/583 (23%), Positives = 235/583 (40%), Gaps = 75/583 (12%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 + ++ L+ +F + + +K L +V +L + L L G DE Sbjct: 11 EAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHDGW--LPVLFGNDE 68 Query: 79 RLRTHREGLPAADFSVFYHLISID--RNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 R Y+ +S++ I++K + + P+ T P A W ERE Sbjct: 69 RTL--------NGHYAVYYALSMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGERE 120 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALT 194 D++G+ G P+ RR+++P W HPLRKD P ++ Sbjct: 121 IRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRLRPEPTTDSE----------- 169 Query: 195 FKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEK 254 N D + +GP H ++ L +DGE+IVD + Y HRG EK Sbjct: 170 -----TYPFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEK 224 Query: 255 MGERQS-WHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRIN 313 + E + ++ +DR+ + G + + Y +VE GI VP R + IR +L E+ R++ Sbjct: 225 LAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLH 284 Query: 314 SHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWD 373 SHLL + VG T F R+K + E + G R IGGV D+ + Sbjct: 285 SHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDILKEQR 344 Query: 374 RLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFD 433 + + M ++ + L ++ R+QG+ + A D Sbjct: 345 LQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIA----------------RD 388 Query: 434 VRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH 493 +R PY+ Y N + G D ++RVM++V+E SL +LE L+NMP+ P + Sbjct: 389 LRFDHPYADYGNIPKTLFTFTG-GDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEG 447 Query: 494 PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSY 553 P + +EA +G + ++ + + Sbjct: 448 FSY---------------------------KPHAFALGFVEAPRGEDVHWSMLGDNQKLF 480 Query: 554 RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R R R ++A+ + +RG+ VSD + +GS+D S DR Sbjct: 481 RWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 523 >UniRef50_Q2K3U2 NADH-quinone oxidoreductase subunit D 2 n=7 Tax=Proteobacteria RepID=NUOD2_RHIEC Length = 404 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 169/405 (41%), Positives = 243/405 (60%), Gaps = 2/405 (0%) Query: 193 LTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGA 252 +T E + N + LNLGP HPS HG R+VL+LDGE + P IGY HRG Sbjct: 1 MTEVTELSRPEGEALNTREVLLNLGPQHPSTHGVLRLVLELDGEFVERVDPHIGYLHRGT 60 Query: 253 EKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRI 312 EK+ E ++ P TDR++YL N + + LAVEKL GI P R IRVM++EL RI Sbjct: 61 EKLAESFTYTQIFPLTDRLDYLCPPSNNLAFALAVEKLLGIEAPIRAQYIRVMMAELARI 120 Query: 313 NSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGW 372 + HLL D+GAMT + + +R+ I DL+E ITG RMH ++ R+GGV DLP G+ Sbjct: 121 SGHLLITGALPMDLGAMTALLYVMREREMIMDLLEMITGARMHTSFCRVGGVREDLPDGF 180 Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 +REF D P R+ YE+ N + R++G+ A++A++ G +G LRA+G+D+ Sbjct: 181 FPKIREFCDIFPNRIRDYERLLEDNRVFLNRTKGIGVISAEDAVDLGLSGPNLRASGVDW 240 Query: 433 DVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD 492 D+R+ PY Y+ DF + + DCY R +V+E+R+S+RI+EQC++ MPEGPF+ D Sbjct: 241 DIRRDEPYEIYDRLDFNV-ITRDEGDCYARWRCRVDEMRESMRIIEQCIDQMPEGPFQID 299 Query: 493 HPLTTPP-PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM 551 P P K+R +E LI HF ++G +P E + IEA KG +Y+ SDGS Sbjct: 300 MPTIAFPLDKDRVHCSMEALIQHFDLSAYGFKVPKGEVYSAIEAPKGELGFYIISDGSPK 359 Query: 552 SYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +R +VR PSF +LQ + ++D+I LGS+D VM++VD+ Sbjct: 360 PFRMKVRAPSFVNLQALFGVTNARYLADMIAVLGSLDPVMAEVDK 404 >UniRef50_B1ZRT0 NADH-quinone oxidoreductase subunit D 1 n=16 Tax=Bacteria RepID=NUOD1_OPITP Length = 426 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 168/411 (40%), Positives = 243/411 (59%), Gaps = 2/411 (0%) Query: 187 DLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIG 246 + T + G + D M L++GP+HPS HG RI ++L+GE + P IG Sbjct: 17 AQQAGGGTPVRSGPPDEGGEFSGDRMSLSMGPSHPSTHGVLRIQMELEGEILTKADPIIG 76 Query: 247 YHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVML 306 Y HRG EK+ E +++ ++PYTDR++YL N M YV+AVEKLAG+TVP R IRV+ Sbjct: 77 YLHRGDEKIAENMTYNQFVPYTDRLDYLAPLANNMAYVIAVEKLAGLTVPPRCQAIRVIT 136 Query: 307 SELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAH 366 +EL RI+SHL+ + F DVGA T + + R+ +Y+L E +TG R ++ RIGGV Sbjct: 137 AELARISSHLMGLGAFGLDVGAWTVLVLSLNQREFLYNLFEDLTGARFTTSYTRIGGVTR 196 Query: 367 DLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR 426 D+P GW + F D L +N I R+ GV ++A+ +G TG R Sbjct: 197 DVPPGWLENVGTFCDKFLPALEEILSLLTRNKIFLDRTVGVGVISKEDAIAYGITGPNAR 256 Query: 427 ATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE 486 +GI D+RK RPYSGYE ++F++PVG DCY R +++ EE+RQS+RI+ Q + N P Sbjct: 257 GSGIATDLRKDRPYSGYEQYEFDVPVGTK-GDCYDRYLVRGEEMRQSVRIIRQVIKNFPG 315 Query: 487 GP-FKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT 545 G + + PPK + L +E LI F+ V+ GP MPA E + E KGI +Y+ Sbjct: 316 GDWYATEAKKVFLPPKGKVLSSMEELIQQFMLVTEGPQMPAGEVYFEAENPKGILGFYIV 375 Query: 546 SDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 S G + YR ++R+PSF +L +P +G L+SD++ LGS+DFVM + DR Sbjct: 376 SKGGGVPYRLKIRSPSFCNLSLVPKLCQGVLISDVVAILGSLDFVMGECDR 426 >UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET0_ARCPR Length = 709 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 152/584 (26%), Positives = 268/584 (45%), Gaps = 40/584 (6%) Query: 16 HLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHG 75 +++P + R D GV V + ++ D +K+ + L G Sbjct: 163 RVENPAVVPNVERGRDDYAKTLEDVLGVRVYTVGKDHYYAFVDDVKRSAEILAHL----G 218 Query: 76 MDERLRTHREGLPAAD-FSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYE 134 D + +P D F V + L + + + + L ++ + V + + +FP++++ E Sbjct: 219 FDNVKDVNVLDVPHEDTFIVEFTLHNYENYKLVTLAKRISRKNPKVESLSDIFPSSDYME 278 Query: 135 RETWDLFGITFDGHPNL-RRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEAL 193 RE + FG+ F+G+ + R ++ + PLRKD+ + + ++ ++ Sbjct: 279 REMHEFFGVVFEGNKWMGRNFLLDVSTPKFPLRKDFRLESQ-------SIEEERPFLQDF 331 Query: 194 TFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAE 253 + + D L +GP HP + G R++++LDG+ I D +PD GY HRG E Sbjct: 332 DGNLDVTKLPDEFVKGDEYILVVGPQHPGS-GHMRLIVKLDGDIIKDVIPDPGYVHRGVE 390 Query: 254 KMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRIN 313 K+ E + + IP +R ++ YV A+E+ GI V +R IR +L+EL RI Sbjct: 391 KIAESRIYIKNIPLVERPCITDFANYDICYVKAIEEALGIEVSERAKYIRTILAELCRIG 450 Query: 314 SHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWD 373 +HL +G T +AF R+ + + + +TG R+ ++ GGV D+ Sbjct: 451 THLYDAGILSIFLGHSTGFMWAFGLREFVCEALTILTGARVTGSFIVPGGVRWDVSDEKL 510 Query: 374 RLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFD 433 R +RE + M +RL +EK ++N + R + V K+A E G G LRA+ + D Sbjct: 511 RRVREIVLAMRRRLEKFEKMFVKNPTVVARLENVGILSKKDAKELGIVGPFLRASNVRHD 570 Query: 434 VRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH 493 R + Y Y+ D+++ D Y R++++VEE+ QS++I++Q + ++P G K D Sbjct: 571 WRL-KGYEAYDCVDWDVVTAEE-GDSYARLLVRVEEINQSIKIIDQLVRDLPSGETKVDM 628 Query: 494 PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDG-STMS 552 T V+P E +E +G + SDG ST Sbjct: 629 WKLT-----------------------DLVLPLGEFVSCVEGARGTIYMSIVSDGESTTP 665 Query: 553 YRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR R+ TPS+ +L+ A +G ++DL GS + + DR Sbjct: 666 YRFRIVTPSWYNLRGFVEACKGERLADLQAIYGSFGYFPPEADR 709 >UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 Tax=Archaea RepID=Q64DY8_9ARCH Length = 788 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 155/608 (25%), Positives = 262/608 (43%), Gaps = 44/608 (7%) Query: 15 DHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLH 74 ++ L+ + ++ T + E L+E L D Sbjct: 199 WAFGKDLVKNLKAQLNGLYTSITVTDKNRIAIKTSPENLVETSRKL----------SDTM 248 Query: 75 GMDERLRTHREGLPAAD-FSVFYHLISIDRNRD-IMLKVALA---ENDLHVPTFTKLFPN 129 G+D + +P F V Y + ++L + E + +P+ T L+ + Sbjct: 249 GVDHVKSVNVIDVPHERKFMVEYMVSGYTEELMPVILTIFTEIGREAEPEIPSLTSLWES 308 Query: 130 ANWYERETWDLFGITFDGHPNLR-RIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDL 188 AN+ ERE D FG+ F G+ ++ + ++ PLRKD+ +++ E + Sbjct: 309 ANYSERELHDFFGVKFKGNEGMKGKFLLAPDTPDTPLRKDFKLEEEQYTIEEGVPLTPTI 368 Query: 189 EMEALTFKPE----------------EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQ 232 + + E D +GP+H + G R V++ Sbjct: 369 TPPHYMPPSSSLSYSESELEDLKMPAYEDVLKEAEKNDEFVAFIGPHHSGS-GHLRWVMR 427 Query: 233 LDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAG 292 + G+ I D +PD GY HR EK+ E + + +P T+R + YV A+E G Sbjct: 428 MKGDIIKDVIPDPGYVHRSMEKIAENRLYIQNVPLTERPNISDPINMNLGYVRAIENALG 487 Query: 293 ITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGF 352 I VP+R IR +++EL RI + + F +G T ++F R+ + +L+ +TG Sbjct: 488 IEVPERAKYIRTIMAELSRIGAFFYDMGIFPLFMGHSTGFMYSFAIREMVLELMVRMTGS 547 Query: 353 RMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGA 412 R P++ GG+ D+P R+F + KRL YE + N +L R + V Sbjct: 548 RCTPSFIVPGGIRRDIPDDVLDRTRKFTTAIHKRLKKYENIFVYNPVLISRMKEVGVLTR 607 Query: 413 KEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQ 472 +EA+ G G LRA+G+++DVRKA PY Y+ D+E G DC R+ ++EE++Q Sbjct: 608 EEAIRCGIVGPFLRASGVEYDVRKAEPYEVYDKLDWE-ATTGDAGDCLGRIFGRLEEMKQ 666 Query: 473 SLRILEQCLN---NMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANES 529 S+ I+ Q ++ MP G ++ L ++ V V+P E Sbjct: 667 SVEIVRQAVDAVQEMPRGGVISEEILGDYKEASDDIRGY------LYNVYGDLVLPKGEW 720 Query: 530 FQMIEATKGINSYYLTSDG-STMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSID 588 + EA +G Y + SDG S + YR R+ TP + +L+ I A +G V+D S Sbjct: 721 TSVTEAARGTVLYSIISDGESNVPYRVRIITPCWMNLRGIIEASKGERVADFWTVYASFG 780 Query: 589 FVMSDVDR 596 + + DR Sbjct: 781 YFPPEADR 788 >UniRef50_Q24ST8 Formate hydrogenlyase subunit 5 n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST8_DESHY Length = 554 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 136/595 (22%), Positives = 235/595 (39%), Gaps = 43/595 (7%) Query: 4 LTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKL 63 + + E + R++ ++ V+ + P+ F+ +VW+K L EV + L Sbjct: 1 MGSMESSASLRNYFEERVLKQ------PEGFSFGLWTKNEGLVWLKPACLPEVMEQLWLK 54 Query: 64 PKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTF 123 +L G DER H V Y L+ + + L E P+ Sbjct: 55 VPSRPLLMTHVGNDERSLGHG--------FVIYLLLHFPGDFTLTLGARGIE--KSFPSL 104 Query: 124 TKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFEL 181 T L P NW ERE DL G+ DGHP+ R +++ W G +PLRK P Sbjct: 105 TLLCPALNWPEREVRDLLGLHPDGHPDPRPLVLHPGWTGGFYPLRKPCPETPASIGGECP 164 Query: 182 TKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDC 241 +A +++ + E E + +GP H Q GE ++ Sbjct: 165 GEALKEVSF------NPQPLSFTEAEGEGTFEIPVGPVHAGIIEPGHFRFQTIGETVLHL 218 Query: 242 VPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNV 301 + Y H+G EK+ E + + +R+ + + + Y AVEKL G+ VP + Sbjct: 219 DAQLFYTHKGIEKLLEGKDLEEGLKIVERVCGVCAVSHALAYCEAVEKLKGMEVPRWILG 278 Query: 302 IRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRI 361 R +L+EL R+ +H+ I VG A +++++ L + G R Sbjct: 279 WRTVLAELERLYNHVGDIGNLCAGVGFALGNVNALQNKEQLQRLNHQLFGHRFLRGNITP 338 Query: 362 GGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTT 421 GGV L+ L + + + ++ + R+ + AL+ G T Sbjct: 339 GGVKKIPQGEERAYLQRRLAELEQDFEEWLPLIQEHDGFRQRAITTGVLSKQSALDLGVT 398 Query: 422 GAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCL 481 G RA+GI D R+ + YE E V D ++R+M++V E++QS +L + L Sbjct: 399 GPAARASGISQDWRERHAHLLYEELKMEPQVEQE-GDVWSRLMVRVREVKQSFALLAELL 457 Query: 482 NNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINS 541 + +E P + ++ E+ +G + Sbjct: 458 EG------------------DFLQDTVEQGDFDLNGSGAFSPQPYSFAWGCAESPRGTDV 499 Query: 542 YYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +L D YR R+R+ S+A+ +P A++G++V D + S + S DR Sbjct: 500 IWLMLDDEGKIYRCRIRSASYANWAAVPLAVQGNIVPDFPLINKSFELCYSCCDR 554 >UniRef50_A9B4Z7 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=Bacteria RepID=NUOD1_HERA2 Length = 422 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 152/412 (36%), Positives = 233/412 (56%), Gaps = 4/412 (0%) Query: 188 LEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGY 247 + E M L++GP HPS HG R+ ++L+GE +V PD+G+ Sbjct: 12 EIPTPSQIAAVALNNEPDENGEQSMVLSMGPQHPSTHGVLRLAVELNGENVVQLAPDVGF 71 Query: 248 HHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLS 307 H G EK E +++ I TDR++YL N M YV A+EKL VP+R +RV+L Sbjct: 72 LHTGIEKTIETKTYTKSIVLTDRMDYLAPMSNNMVYVAAIEKLMQQDVPERAQTLRVLLL 131 Query: 308 ELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHD 367 EL RINSHL+++ T D+ AM+ F+A +R+ I D+ E +TG RM ++FR+GG+A D Sbjct: 132 ELTRINSHLVWLGTHALDLAAMSVFFYAMREREYILDIFEMLTGARMMTSYFRVGGLAWD 191 Query: 368 LPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRA 427 +P + + +FL ++ YE N + K R++GV A +A+ G +GA LRA Sbjct: 192 IPADFIPTVEDFLTHFLPKVDEYEDLLTNNLLWKQRTKGVGVVNAADAIALGLSGANLRA 251 Query: 428 TGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNN---M 484 +G+D+D+RK PYSGYE + F++PVG D Y R +V+E+R+S++I Q + M Sbjct: 252 SGVDWDLRKTMPYSGYETYQFDVPVGQ-AGDIYDRYRCRVQEMRESVKIARQAIERVKQM 310 Query: 485 PEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYL 544 P+ ++ PPPK +E+LI HF + G P ++ IE+ +G Y+ Sbjct: 311 HGQPYVTENRKVAPPPKSEITYSMESLIHHFKLWTEGFRPPRGSAYAAIESPRGEIGCYV 370 Query: 545 TSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 SDG+ +R R PSF +LQ +P +G L++DL+ + SID V+ +VDR Sbjct: 371 VSDGTPKPWRVHFRAPSFINLQALPHIAKGKLMADLVALIASIDPVLGEVDR 422 >UniRef50_Q4P4N9 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P4N9_USTMA Length = 498 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 161/436 (36%), Positives = 238/436 (54%), Gaps = 27/436 (6%) Query: 187 DLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCV---- 242 + + + G R + +N GP HP+AHG R++L+L+GEEI+ Sbjct: 64 EELHDKSAHEILREGGSRKDRSLRHFTVNFGPQHPAAHGVLRLILELNGEEILRTDLAIC 123 Query: 243 ----------------------PDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 P +G HRG EK+ E +++ +PY DR++Y+ NE Sbjct: 124 KANIADSIQSCLFWPSGVCILQPHVGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMTNE 183 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQ 340 + Y AVEKL I VP+R IR M E+ RI +H + + + + DVG +TP +AF +R+ Sbjct: 184 LCYSRAVEKLLNIEVPERAKWIRTMFGEITRILNHCMAVLSHVMDVGGLTPFLWAFEERE 243 Query: 341 KIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTIL 400 K+ + E ++G R+H A+ R GGVA+DLP G + ++ R+ E+ N I Sbjct: 244 KLMEFYERVSGARLHAAYVRPGGVAYDLPPGLLDDIHKWATQFGSRVDEIEEVVTGNRIW 303 Query: 401 KGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCY 460 KGR+ G+ A+EAL++G +G LR +GI +D+RK PY Y+ +F++PVG DCY Sbjct: 304 KGRTIGIGKVTAQEALDYGFSGVMLRGSGIPWDIRKVAPYDAYDQVEFDVPVGKN-GDCY 362 Query: 461 TRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSW 520 R + +VEE RQSLRI+EQCLN MP G K D PPP+ + +E+LI HF S Sbjct: 363 DRYLCRVEEFRQSLRIIEQCLNKMPAGQIKVDDHKLVPPPRATMKESMESLIHHFKLFSE 422 Query: 521 GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDL 580 G +P E++ IEA KG YL SDG+ YR ++R P FAHL R + D+ Sbjct: 423 GYAVPPGETYSAIEAPKGEMGVYLVSDGTNRPYRCKIRAPGFAHLAGADFMARHHYIPDM 482 Query: 581 IVYLGSIDFVMSDVDR 596 + +G++D V +VDR Sbjct: 483 VAIIGTLDLVFGEVDR 498 >UniRef50_Q2S5J0 NADH-quinone oxidoreductase subunit D n=5 Tax=Bacteria RepID=NUOD_SALRD Length = 451 Score = 427 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 167/438 (38%), Positives = 249/438 (56%), Gaps = 8/438 (1%) Query: 160 WKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPN 219 W H + E A Q T + E + E+ M LN+GP Sbjct: 21 WPKHNEKIYERLENKHAWLEEKRAAAQGDGKPPATQRSEVDPL------ENEMILNIGPQ 74 Query: 220 HPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 HP+ HG R V+++DGE I V DIGY HRG EK+ E +++ ++PYTDR++YL N Sbjct: 75 HPATHGVLRCVVKMDGETIEKSVLDIGYLHRGIEKLAEHKTYQEFMPYTDRMDYLSPYSN 134 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDR 339 + + LAVEKLA I VP+R IR+++SEL RI+SH L++ + D GA++ + F +R Sbjct: 135 NVAWCLAVEKLADIEVPERAQWIRMIMSELARISSHCLWLGVGMMDAGAVSGFVWTFQER 194 Query: 340 QKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTI 399 ++IY +++ + G R + RIGGVA+D ++R+F+D P R+A +E +N I Sbjct: 195 EEIYSIMDEVAGARFTVSHSRIGGVANDFSPRAIEMIRDFVDTFPDRIAGWEGLLNKNRI 254 Query: 400 LKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDC 459 R++GV +EALE G TG LR +G+ +DVR+ PY Y+ DF IPV DC Sbjct: 255 WVERNKGVGRVTKEEALELGLTGPNLRGSGVPYDVRRFEPYLKYDEVDFTIPV-REEGDC 313 Query: 460 YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVS 519 R L+++E++QS+RI+EQCL+ M EGP ++D P KE +E +I F+ Sbjct: 314 LARYFLRLDEMKQSVRIIEQCLDRMTEGPIRSDDAKEAYPSKEEVYYSMEGMIHDFMYTD 373 Query: 520 WGPVMPAN-ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVS 578 G V P S+ IE KG +YLTSDG+ +R R+ PSF +LQ + + G +V+ Sbjct: 374 VGTVPPKGAHSYHAIEGPKGELGFYLTSDGTGRPWRVRINAPSFTNLQAMEHMLEGEMVA 433 Query: 579 DLIVYLGSIDFVMSDVDR 596 D +V +GS+D VM + D+ Sbjct: 434 DTVVIIGSLDPVMGEADK 451 >UniRef50_C1XJB2 NADH dehydrogenase subunit D n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XJB2_MEIRU Length = 415 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 158/390 (40%), Positives = 242/390 (62%), Gaps = 4/390 (1%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 + M LN+GP HPS HG R+V+ L GE+I+ P IGY H G EK E +++ I YT Sbjct: 27 EVMTLNVGPQHPSTHGVLRVVVDLSGEQILRLTPHIGYLHTGFEKNMEHRTYTQCITYTP 86 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R++YL +++ Y L+VEKL G VP R IRVML+EL RI SHL+++ T + D GA+ Sbjct: 87 RMDYLHSFSHDLAYALSVEKLVGAQVPPRAQAIRVMLNELSRIASHLVFLGTGLLDFGAL 146 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 TP F+AF +R+ + DL E ++G R H + RIGG+ DLP + +++F+ MP R+ Sbjct: 147 TPFFYAFREREAVLDLFEWVSGQRFHHNYIRIGGLKEDLPPEFLGEVKKFIAQMPARIDE 206 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 YE ++ I R++GVA + A+ TG LRA+G+++DVRKA PY+GYE +DF+ Sbjct: 207 YEALFRESPIFYERARGVAVIPPEVAINLSLTGGSLRASGVNYDVRKAYPYAGYETYDFD 266 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE---GPFKADHPLTTPPPKERTLQ 506 +PV G D + R+++++ E+R+S++I+ Q + + GP + +P + PP+ Sbjct: 267 VPVLTG-GDVFDRMVIRILEMRESVKIIRQAVERLEALGPGPIRDPNPQISLPPRHLLET 325 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 +E +I HF V+ G E + E+ +G YY+ SDG +M YR +VR PSF +LQ Sbjct: 326 SMEAVIYHFKLVTEGFHPALGEVYVPTESARGELGYYIVSDGGSMPYRVKVRAPSFVNLQ 385 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P A +G ++D++V + S+D VM DVDR Sbjct: 386 SLPYACKGVQMADMVVVIASLDPVMGDVDR 415 >UniRef50_B5YKI5 NADH-quinone oxidoreductase subunit D 1 n=12 Tax=Bacteria RepID=NUOD1_THEYD Length = 397 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 147/398 (36%), Positives = 230/398 (57%), Gaps = 4/398 (1%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 M+ + + +N+GP HP+ HG R+VL+L+GE I C+P IGY HRG EK+ E ++ Sbjct: 1 MQNKIKTVKELTVNMGPQHPATHGVLRLVLELEGEVIKKCIPYIGYLHRGVEKLSEDLTY 60 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 +P TDR++YL VN + + +AVEKL GI +P+R IR ++ E+ RI SHL++I+T Sbjct: 61 VQSLPITDRMDYLSSMVNNVGFCVAVEKLMGIQIPERAKFIRTIMGEMARICSHLVWIAT 120 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 D+GAMT +A DR+ + +L E +TG R+ ++ R+GGV D+ + +F++ Sbjct: 121 HALDIGAMTVFLYAMRDREYLLELFEMVTGARLTVSYPRVGGVRCDVNNEFLDKTYKFIE 180 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 P+++ YE +N + R++GV A+EA+ WG TG LR +G+ +DVRK PY Sbjct: 181 EFPRKVEEYETLIDRNRVWLKRTKGVGVISAEEAINWGLTGPTLRGSGVYYDVRKFFPYD 240 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y+ DFE+P+G D Y R ++ E RQS +I++QC+ +P+G A++ L P+ Sbjct: 241 AYDKVDFEVPLGKN-GDIYDRYKCRMLEFRQSAKIIKQCIERLPDGSILAENALRIRMPE 299 Query: 502 ERTLQHIETLITHFLQVSW---GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 + +I + E + +EA +G +Y+ D S+ YR RVR Sbjct: 300 SPLKIDKKDIIFDVYIEDKQIQEFIQKFTEVYASVEAPRGELGFYIVCDNSSKPYRMRVR 359 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PSF H +P GSLV+D+I +GSID V+ + DR Sbjct: 360 APSFVHAGVLPKLCEGSLVADVIANIGSIDIVLGECDR 397 >UniRef50_B9L172 NADH dehydrogenase I, D subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L172_THERP Length = 409 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 156/395 (39%), Positives = 238/395 (60%), Gaps = 2/395 (0%) Query: 203 KRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWH 262 ++ T + LN+GP HPS HG R+ L L+GE ++ C P IGY HRG EK+GE + Sbjct: 16 RQITPTRRELVLNMGPQHPSTHGVLRVRLTLEGETVIACDPVIGYLHRGVEKLGESHRYA 75 Query: 263 SYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF 322 ++P+TDR +Y+ N + YVLAVEKL GI P+R R++++EL RI SHL+++ T Sbjct: 76 QFVPWTDRTDYVAAPSNNLGYVLAVEKLCGIQAPERAQYWRMIMAELTRIASHLVWLGTH 135 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDW 382 D+GA++ + F DR+ I D+ E G R+ IGG + ++P ++REF + Sbjct: 136 ALDIGALSVSLYTFRDRELILDIFEKFCGARLTTNMMEIGGFSREIPPDLPEMVREFCRY 195 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 PK + YE +N I R++GV A+ +G TGA LR +G+++DVRKA PY Sbjct: 196 FPKAIRQYEDLLTENPIWLARTKGVGVIEPDVAINYGLTGACLRGSGVNYDVRKAMPYLL 255 Query: 443 YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPK 501 Y+ +FE+P+G D Y R ++++EE+RQ+LRI+EQCL +P +GP A PP Sbjct: 256 YDRVEFEVPLGTH-GDVYDRYLVRIEEMRQALRIIEQCLEQVPTDGPLMAYESPYVIPPH 314 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 + + E + HF+ V G P E + +E +KG YY+ SDGS + YR R+RTP Sbjct: 315 KTVMTTAEDMQRHFIWVIKGFSPPKGEVYHAVEHSKGELGYYIVSDGSPIPYRVRIRTPD 374 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +LQ +P +G++++D++ +G+ID V+ VDR Sbjct: 375 FVNLQSLPYMAQGAMLADIVALIGTIDIVLGSVDR 409 >UniRef50_D1C6X3 NADH dehydrogenase I, D subunit n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6X3_SPHTD Length = 410 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 161/402 (40%), Positives = 237/402 (58%), Gaps = 2/402 (0%) Query: 196 KPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKM 255 ++ ++ M LN+GP HPS HG R+ L L+GE I C P IGY HRG EK+ Sbjct: 10 PVIISEERQISDTRREMVLNMGPQHPSTHGVLRVRLTLEGETITACDPVIGYLHRGVEKI 69 Query: 256 GERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH 315 GE + + + P+TDR +Y+ N + YVLAVEKL GI P+R R+++ EL RI SH Sbjct: 70 GESKRYAQFTPWTDRTDYVAAPSNNLGYVLAVEKLLGIEAPERAQYWRMIMGELARIASH 129 Query: 316 LLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL 375 L+++ T D+GA++ + F +R+ I D+ E G R+ IGG + +P G + Sbjct: 130 LVWLGTHALDIGALSMSLYCFRERELILDIFEKFCGARLTTNMMEIGGFSRPIPAGLPEM 189 Query: 376 LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR 435 +R+FL P+R YE N I R++GV A+ +G TGA LR +G+++DVR Sbjct: 190 IRDFLKVFPQRQREYEDLLSANPIWLARTRGVGVIEPDVAINYGLTGACLRGSGVNYDVR 249 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHP 494 KA+PY Y+ DFE+P+G D Y R ++++EE+RQSL+I+EQCL+ +P +GP K Sbjct: 250 KAQPYLLYDRIDFEVPLGT-QGDVYDRYLVRMEEMRQSLKIIEQCLDQVPTDGPLKLAES 308 Query: 495 LTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYR 554 PP E L E + HF+ V G P E + IE +KG YY+ SDGS + YR Sbjct: 309 NYVIPPHETVLTTAEDMQRHFIWVIKGFSPPKGEVYMSIEHSKGELGYYIVSDGSPVPYR 368 Query: 555 TRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R+RTP F +LQ +P G++++D++ +G+ID V+ VDR Sbjct: 369 LRIRTPDFVNLQSLPYLAEGAMLADVVALIGTIDIVLGSVDR 410 >UniRef50_Q0W6T4 [NiFe]-hydrogenase, large subunit (EchE-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T4_UNCMA Length = 486 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 125/523 (23%), Positives = 216/523 (41%), Gaps = 57/523 (10%) Query: 74 HGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWY 133 G+D +G+ ++ ++ +L+ L + + + T L P A+W Sbjct: 4 TGVD-------KGVAGIRVDYYFGFDHLEPGCHTILRTFLDRENPVLKSVTTLTPQADWS 56 Query: 134 ERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEAL 193 ERE + G+ + HP+ R + +P W+ + P + + Sbjct: 57 EREMIEFLGVRAEEHPDPRHLWLPLNWEQMHTDEAAPEKKPQ------------------ 98 Query: 194 TFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAE 253 + GP HP+ + + ++ E + +G++HR Sbjct: 99 -----SIQASDHITTMPVSTIPYGPYHPAFIESNYFKMAVEDEVVKKADLKLGFNHRSII 153 Query: 254 KMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRIN 313 K+ ER+ ++ I +R+ L + + + LAVE + +TVP R ++IR M+ E+ RI Sbjct: 154 KLMERRDYYKDIYLAERVCGLCNAHHALSFCLAVENIGQVTVPKRADIIRTMICEMERIQ 213 Query: 314 SHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWD 373 SHL+ I VG T + R+ I D +E ++G R+ +GGV D+ Sbjct: 214 SHLMAIGILGDLVGYKTMLMQFLRIREDIQDSLELVSGQRVTHGLITLGGVRRDITPAQS 273 Query: 374 RLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFD 433 ++ L + K + + L N +L GR + V +EA+ G G R +G D Sbjct: 274 NFVKRKLASLKKGVQTLYDEMLSNNVLIGRLKNVGVLPPEEAVRLGAVGPTARGSGQRLD 333 Query: 434 VRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADH 493 VRK PY+ YEN D++I V D RV +K+ E S+ I+EQCL + P Sbjct: 334 VRKNTPYAYYENLDWDI-VTDNGCDSLARVEVKMREALVSISIVEQCLEKLSTVP----- 387 Query: 494 PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSY 553 ++ +P E+ E +G Y++ S+G+ Sbjct: 388 ---------------------PEIITKLEELPCAEALGKTEPPRGELLYHVASNGTNTPE 426 Query: 554 RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R+R P+F + + GS V+D+ +GSID S DR Sbjct: 427 FVRIRVPTFMTAYIMLKLLHGSYVADVPAIMGSIDPCYSCTDR 469 >UniRef50_D1Z1Z0 Putative [NiFe]-hydrogenase large subunit n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Z0_METPS Length = 530 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 125/552 (22%), Positives = 223/552 (40%), Gaps = 52/552 (9%) Query: 45 VVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRN 104 +V I+ + + + L K L G+D G+ + ++ + + Sbjct: 3 IVEIRPDAISDNVTELLKRGAR---LIYASGVD-------MGVRGIKVNYYFCFDMKEPS 52 Query: 105 RDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHP 164 +L+ L + V + T + A+W ERE + G+ GHPN + +P W Sbjct: 53 EHTILRTYLDRENPVVQSITPITDQADWSERELIEFLGVKVQGHPNPTHLWLPLNWDDMY 112 Query: 165 LRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAH 224 L + + D E E + P + + GP HP+ Sbjct: 113 LNG---------------RPEADHETERINAAPPATTPRDNIVTLPVTAIPYGPYHPAFI 157 Query: 225 GAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYV 284 + + + ++ E + +G++HR K+ ER+ ++ I +RI + + + Sbjct: 158 ESNFLKMSVEDEVVKKVDLKLGFNHRSVIKLMERRDYYKDIFLAERICGFCNSHHALSFA 217 Query: 285 LAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYD 344 +VE +A I +P + + R +L E+ RI SHLL + G T + + R+++ D Sbjct: 218 RSVEDIASIDIPPKAKLARTLLCEMERIQSHLLAVGLIGDLTGFRTMLMHSLRVREEMQD 277 Query: 345 LVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRS 404 +E ++G R+ IGG+ D+ + L M K + + AL N +L GR Sbjct: 278 SLEVVSGQRVTHGLITIGGIRRDITPAQADFILNKLRIMKKSVPEFFDQALSNDVLVGRL 337 Query: 405 QGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVM 464 + V + +++ G G R +G+ DVRK PY YE+ D++I V D R+ Sbjct: 338 ENVGVLSLENSVKLGAVGPTARGSGLRIDVRKNSPYEAYEDVDWDI-VTENGGDSLARMK 396 Query: 465 LKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVM 524 +K+ E+ S+ I EQC + P + + Sbjct: 397 VKMREVLMSMHIAEQCCEKIKTAP--------------------------AGLATKVNEL 430 Query: 525 PANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYL 584 P E+ E +G Y++ S+G+ R+R P+F + I+G V D+ + Sbjct: 431 PCGEAISKSEPPRGELLYHVASNGTNTPDFVRIRVPTFLTAHIMLRLIQGGWVGDVPAII 490 Query: 585 GSIDFVMSDVDR 596 GSID S DR Sbjct: 491 GSIDPCFSCTDR 502 >UniRef50_C1D0H4 Putative NADH dehydrogenase (Quinone), subunit D (NADH-quinone oxidoreductase, subunit D) n=1 Tax=Deinococcus deserti VCD115 RepID=C1D0H4_DEIDV Length = 412 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 152/389 (39%), Positives = 229/389 (58%), Gaps = 1/389 (0%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + + M LN+GP HPS HG R+V+ +DGE + VP +GY H G EK E +++ + Y Sbjct: 25 HTEVMSLNVGPQHPSTHGVLRLVVDMDGEYVRKVVPHMGYLHTGFEKTFEHRTYQQGVTY 84 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 R +YL +E+ YVL+VEKL VPDR ++IRV+L EL RI+SHL+++ T + D+G Sbjct: 85 APRTDYLHCFGHELAYVLSVEKLMQAQVPDRASMIRVILHELGRIHSHLVFVGTGLLDLG 144 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 A+TP F+AF +++ DL E TG+RM+ +FR+GG++ D+P W + +FLD M + + Sbjct: 145 ALTPFFYAFREKESCVDLFEEATGYRMNQGFFRVGGLSRDVPEDWPGHVAQFLDQMERGV 204 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y N I R++GV AL+ G TG LRA+G+ DVRKA PY GYE +D Sbjct: 205 DEYTNLFANNPIFLDRARGVGVIPTDVALDLGLTGPNLRASGVPLDVRKAHPYCGYEAYD 264 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F + + D R +++ E +S++I+ Q L + G K + + PP+ Sbjct: 265 FNV-ISSTDGDSLARFTMRLLEFSESIKIIRQALARLKPGLIKDPNRKISLPPRHELETS 323 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +E +I HF V+ G P E + +E +G YY+ SDG ++ YR ++R PSF +LQ Sbjct: 324 MEAVIHHFKLVTEGFHPPTGEVYVPVEGARGEVGYYIVSDGGSVPYRVKIRAPSFVNLQA 383 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + A G+ +DLI L +ID V+ DVDR Sbjct: 384 LEYACVGAQFADLITILATIDPVLGDVDR 412 >UniRef50_Q1QP34 NADH-quinone oxidoreductase subunit D 1 n=9 Tax=cellular organisms RepID=NUOD1_NITHX Length = 396 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 151/389 (38%), Positives = 225/389 (57%), Gaps = 5/389 (1%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 +N GP HP+AHG R+VL+LDGE + P IG HRG EK+ E +++ +PY DR+ Sbjct: 9 FTINFGPQHPAAHGVLRLVLELDGEVVRRVDPHIGLLHRGTEKLIEHKTYLQALPYFDRL 68 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ E + LA EKL IT+P R +IRV+ E+ R+ SHLL ++T DVGA+TP Sbjct: 69 DYVAPMNQEHAFCLATEKLLNITIPKRGQLIRVLYCEIGRLLSHLLNVTTQAMDVGALTP 128 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + F +R+K+ E +G RMH +FR+GGV DLP + +F D K E Sbjct: 129 PLWGFEEREKLMVFYERASGARMHANYFRVGGVHQDLPSKLLDDIWDFCDPFLKVCDDLE 188 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 +N I K R+ G+A +A WG +G +R +G +D+RKA+PY Y DF+IP Sbjct: 189 GLLTENRIFKQRNVGIAEVKLADAWGWGFSGVMVRGSGAAWDLRKAQPYECYSELDFDIP 248 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM----PEGPFKADHPLTTPPPKERTLQH 507 +G DCY R ++++EE+RQS+RI++QCL + +GP PP + + Sbjct: 249 IGKH-GDCYDRYLVRMEEMRQSVRIMKQCLEKLRLPEGQGPVATRDHKIVPPSRAEMKRS 307 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +E +I HF + G +PA E + +EA KG YL SDG+ Y+ ++R PSFAHL Sbjct: 308 MEAMIEHFKLYTEGHRVPAGEVYVAVEAPKGEFGVYLVSDGTNQPYKCKIRAPSFAHLSA 367 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + RG +++D+ +GS+D V ++DR Sbjct: 368 MDFLTRGHMLADVSAIIGSLDIVFGEIDR 396 >UniRef50_B8I2P5 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=2 Tax=Clostridium RepID=B8I2P5_CLOCE Length = 530 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 130/580 (22%), Positives = 224/580 (38%), Gaps = 61/580 (10%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 ++ ++ + I + E + K + +L L D Sbjct: 6 ILDTIKRLLSSHILESRLINENEIYFCISPSTVKEDCINVYKNIEC--VLVGLFAND--- 60 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVAL-AENDLHVPTFTKLFPNANWYERETWD 139 +V+Y N I L L + V + P A+ YERE D Sbjct: 61 ----TTPIDNKLTVYYTFAVRSSNTLITLYSKLENDGSAKVDSIALEVPAASLYEREIHD 116 Query: 140 LFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKP 197 ++GI F+ P+ R ++ + HPLR+++ + + Sbjct: 117 MYGIVFEELPDSRELVHHGNFPLDVHPLRRNFKSNTHLPFQQRELE-------------- 162 Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 E + +GP H + GE I++ + Y HRG EK+ E Sbjct: 163 -----FSTITGEGVFEVPVGPVHAGIIEPGHFRFSVAGEPIINLEAKLYYVHRGLEKLCE 217 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT-VPDRVNVIRVMLSELFRINSHL 316 Q + + +++RI N + + A+EKL GIT +P+R RV+ +EL RI HL Sbjct: 218 NQHYMKVLLFSERISGDETFTNSLAFCQAIEKLNGITYIPERAVYSRVLFAELERICGHL 277 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 I D + P R+ I L E +TG R + GG+ D R ++++ Sbjct: 278 GDIQGLCVDTAYIFPSGQFAMMRRWIQLLNEQLTGSRFLRNTNKPGGLRRDFVRSNEKII 337 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 E ++ + K N + R + A++ G G RA+G+ DVRK Sbjct: 338 LECINKLDKEFKETVAIIKNNGMFIDRVEHTGILENSIAVDLNVVGPGGRASGVKTDVRK 397 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPL 495 PY+ Y F +P D R+ +K+EE+ +S+ I++Q L MP EGP D Sbjct: 398 EFPYAAYSKLKFNVP-EHSNCDVNCRMNVKIEEVIESINIIKQVLEKMPEEGPVSVDI-- 454 Query: 496 TTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT 555 G + P + +F M E+ +G N +++ + + +R Sbjct: 455 -------------------------GELKPYSYAFGMTESPRGENLHFVMTGENNTIFRY 489 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +VRTPSF + + A+ + ++D + S + + D Sbjct: 490 KVRTPSFCNWPALCHAVNTNTLTDFPLINKSFNLSYAGND 529 >UniRef50_B5YL34 NADH-quinone oxidoreductase subunit D 2 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=NUOD2_THEYD Length = 401 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 147/389 (37%), Positives = 228/389 (58%), Gaps = 5/389 (1%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L +GP+HP+ HG +++ + +GE +++ PD+GY HRG EK+ E +++ + TDR+ Sbjct: 14 FVLQMGPHHPATHGVLKLLCEFEGERVINIKPDVGYLHRGVEKLSESKTYPGAMTLTDRL 73 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ N + Y LAVE+L GI P R IR M+SE+ R++SHLL+++T D+GAMT Sbjct: 74 DYISSMTNNIGYCLAVERLMGIEPPPRAKFIRTMVSEMTRLSSHLLWLATHALDIGAMTV 133 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +AF +R++I E I G R+ ++ RIGGV D+ + +F+D M R+ YE Sbjct: 134 FLYAFREREQILQFFEKICGARLTVSYPRIGGVRVDIKEHVLDEIYKFMDLMLIRVDEYE 193 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 +N I R++GV ++A+ G TG LR +G+ +D+RK PY Y DFE+P Sbjct: 194 TLLTENRIWIARTRGVGVIAPEDAVLLGLTGPALRGSGVYYDIRKQIPYDAYSEIDFEVP 253 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE--RTLQHIE 509 +G D Y R + ++ E+RQS+ I++QC+ MPEG +D P + R ++ + Sbjct: 254 LGEK-GDTYDRYLCRIREMRQSVLIVKQCIEKMPEGKILSDKSPDIDLPHQAKRKIEPGD 312 Query: 510 TLITHFLQVSWG--PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +L F+ S +MP E + IEA KG +Y+ SDGS YR RVR PSF H+ Sbjct: 313 SLWNGFIAFSEEKQEIMPKGEIYSAIEAPKGELGFYIVSDGSGRPYRMRVRAPSFIHISA 372 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 IP G L++D+I +G++D VM + DR Sbjct: 373 IPKLCEGHLLADVIAIIGTLDIVMGEADR 401 >UniRef50_B1W516 NADH-quinone oxidoreductase subunit D 1 n=24 Tax=Actinomycetales RepID=NUOD1_STRGG Length = 440 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 161/420 (38%), Positives = 228/420 (54%), Gaps = 19/420 (4%) Query: 195 FKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEK 254 +E +++ + +N+GP HPS HG R++L++DGE + + IGY H G EK Sbjct: 22 GDWDEVVESAVKSDDERIIVNMGPQHPSTHGVLRLILEIDGETVTEARCGIGYLHTGIEK 81 Query: 255 MGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRI 312 E ++W + R++YL NE Y L VEKL GI +PDR V+RV+L EL R+ Sbjct: 82 NLEFRNWTQGTTFVTRMDYLTPFFNETAYCLGVEKLLGIEDQIPDRATVLRVLLMELNRL 141 Query: 313 NSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGW 372 +SHL+ I+T ++GA T + + F DR+ + DL E TG RM+ A+ R GG+A DLP G Sbjct: 142 SSHLVCIATGGMELGATTIMIYGFRDRELVLDLFELFTGLRMNHAFVRPGGLAQDLPPGA 201 Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 LREF+ M K L Y+K A N I K R Q V + G TG LR+ G+ Sbjct: 202 VDRLREFIKTMKKNLPEYDKLATGNPIFKARMQDVGYLDLTGCMALGATGPVLRSAGLPH 261 Query: 433 DVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD 492 D+RK+ PY GYE +DFE+P D Y R ++++EE+RQSLRI+EQC++ + GP Sbjct: 262 DLRKSDPYCGYETYDFEVPTA-DTCDSYGRFLIRLEEMRQSLRIIEQCIDRLEPGPVMVA 320 Query: 493 HPLTTPPP----------------KERTLQHIETLITHFLQVSWGPVMPANESFQMIEAT 536 P + +E LI HF V+ G +P + + +E+ Sbjct: 321 DKKIAWPAQLALGPDGLGNSLDHIRNIMGTSMEALIHHFKLVTEGFRVPPGQVYTAVESP 380 Query: 537 KGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 KG ++ SDG T YR R PSF +LQ + A G V+D+IV + SID VM VDR Sbjct: 381 KGELGVHVVSDGGTRPYRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVASIDPVMGGVDR 440 >UniRef50_A8A9X2 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X2_IGNH4 Length = 540 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 156/573 (27%), Positives = 275/573 (47%), Gaps = 52/573 (9%) Query: 36 VQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVF 95 + + V ++ + E LK + + L +D VF Sbjct: 8 ERKEWSNALYVEVEPQYWYENAARLKDQGYLFPSM--LTAVDWPA--------EKKVQVF 57 Query: 96 YHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPN----- 150 + + I ++L + + +P+ + L+P W+E ET+++FGI F GHP+ Sbjct: 58 FLVHRIRDASSVVLSTKVDRENRELPSLSSLYPGVEWHENETYEMFGINFTGHPDYERWG 117 Query: 151 -LRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENE 209 +R++++ + + P + P + + E +R E Sbjct: 118 RIRKLLLSEDPRLFP---------KDRFPLLKDSGGYKDLPKVNWAEIEGTDQEREGLRE 168 Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 D ++ +GP HP+ HG +L L GE + D +P +GY HRG E + E++ + IP D Sbjct: 169 DLTYVYVGPQHPATHGPVGFLLGLKGEIVEDVIPRLGYVHRGVEWIYEQKEYLKVIPLLD 228 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R Y+ G E PYV+A+E++ + V R ++R++ +EL RI SHLLYI +F ++V + Sbjct: 229 RQCYIDGIGWEWPYVMALEEIMDVKVDRRAQLLRILAAELSRIQSHLLYIGSFAENVNHL 288 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 T + DR+ +L+E +TG RM + R GGVA DLP+G+ + + + K Sbjct: 289 TAFAWTVRDREVFINLLEMLTGQRMTFNYLRPGGVAFDLPQGFKDVYEKVVARFHKHFEK 348 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN-FDF 448 + L N + R++GVA A++A+++G +G LRA+G+ +D+R +PY GY++ DF Sbjct: 349 LIETTLDNPTVAMRAEGVAQVSAEDAIKYGWSGPNLRASGVAWDLRINKPYGGYDDGIDF 408 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 E VG V D R++++ EE+RQSL+I+ Q L + E + Sbjct: 409 EGAVGS-VGDNLDRMLVRFEEIRQSLKIIRQVLRELTE-------------------RGQ 448 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST-----MSYRTRVRTPSFA 563 L TH +V P P ++ ++ +G N L ++ S +R +R+P F Sbjct: 449 NELGTHLKRVPPFPRKP-GIAYGYHDSPRGENGILLVANPSDPKWRTRPWRVHMRSPVFV 507 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 H + +G L+ D + + S+D ++++DR Sbjct: 508 HTMSLKYLGKGLLLQDFLAFYISLDTCVAEMDR 540 >UniRef50_Q6MDR3 NADH-quinone oxidoreductase subunit D n=2 Tax=Parachlamydiaceae RepID=NUOD_PARUW Length = 402 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 146/387 (37%), Positives = 227/387 (58%), Gaps = 1/387 (0%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 D M LNLGP HPS HG R+ L+L+GE ++ C P IGY H G EK E +++H D Sbjct: 17 DVMELNLGPQHPSTHGVLRLKLRLEGEVVLSCDPVIGYLHTGVEKECESRTYHQVFTLVD 76 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R++YL G E + A+E+L I VP+R IR++L EL RI SHLL+ T ++ Sbjct: 77 RLDYLSGPAEEQAFAGALERLMNIEVPERAQTIRIILLELSRIASHLLWAGTSALELNMS 136 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 + ++F +R+KI DL E ++G RM P+ +RIGG+A DL + L+EF+ K Sbjct: 137 SVFMYSFAEREKILDLFEQVSGARMFPSLWRIGGLAKDLNSDFISHLKEFISGFQKIWKE 196 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 ++ N + R QGVA + ++ TG LRA+GI +D+RKA PY GYEN++F+ Sbjct: 197 LDRLLTDNFVWCKRLQGVAVIDQEICKQYMCTGPVLRASGISYDIRKAYPYLGYENYNFD 256 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 IP D Y R ++++EE+ QS+ I+EQ + + G + PP++ + +E Sbjct: 257 IPT-HIDGDSYARYLVRMEEMLQSISIIEQAIARLKPGVVLTNDRKVALPPRKELARSME 315 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 +I F +S G P + +E+ +G +Y+ SDG+ YR RVR+PSF+H++ + Sbjct: 316 AVIHQFKLISEGLHPPVGSVYNCVESARGELGHYVISDGTPKPYRLRVRSPSFSHVEVLK 375 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +RG ++SD++V + S+D ++ DVDR Sbjct: 376 KVLRGHVISDVVVAIASVDPILGDVDR 402 >UniRef50_B4SJH6 NADH-quinone oxidoreductase subunit D 1 n=211 Tax=Proteobacteria RepID=NUOD1_STRM5 Length = 436 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 156/436 (35%), Positives = 228/436 (52%), Gaps = 28/436 (6%) Query: 188 LEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGY 247 + P R +NLGP HP+AHG R+VL++DGE +V P +G Sbjct: 2 NTERTMAGGPAPMRDGRRDTEIRNYVMNLGPQHPAAHGVLRLVLEMDGETVVRADPHVGL 61 Query: 248 HHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLS 307 HRG EK+ E + ++ I Y DR++Y+ NE YV A+E L GI P R IR M Sbjct: 62 LHRGTEKLAESKPFNQSIGYMDRLDYVSMMCNEHAYVRAIETLLGIEAPIRAQYIRTMFD 121 Query: 308 ELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHD 367 E+ RI +HL+ I T D+GAM + +AF +R+++ D EA++G RMH ++R GGV + Sbjct: 122 EITRILNHLMNIGTGALDLGAMAVMLYAFREREELMDCYEAVSGARMHATYYRPGGVYRE 181 Query: 368 LPR-------------------------GWDRLLREFLDWMPKRLASYEKAALQNTILKG 402 LP + F P R+ YE N I K Sbjct: 182 LPEQMPKYKESRWKTGKQLRRLNAAREGSLLDFIENFTREFPNRIDEYETLLTDNRIWKQ 241 Query: 403 RSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTR 462 R+ G+ ++A+EWG TG LR +G+ +D+RK RPY+ Y+ DF+IPVG DCY R Sbjct: 242 RTVGIGVVSPQQAMEWGMTGVMLRGSGVAWDLRKKRPYAKYDAVDFDIPVGT-AGDCYDR 300 Query: 463 VMLKVEELRQSLRILEQCLN--NMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSW 520 + +V E+RQS RI+ QC++ GP + PP ++ +E LI HF S Sbjct: 301 YLCRVAEMRQSNRIIRQCVDWLRANPGPVMLHNFKVAPPSRQEMKSDMEALIHHFKLFSE 360 Query: 521 GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDL 580 G +PA E++ +EA KG YL SDG+ +R +R P FAHL + +RG +++D+ Sbjct: 361 GYQVPAGETYAAVEAPKGEFGCYLISDGANKPFRVHLRAPGFAHLSSLDEIVRGHMLADV 420 Query: 581 IVYLGSIDFVMSDVDR 596 + +G+ D V +VDR Sbjct: 421 VAMIGTYDIVFGEVDR 436 >UniRef50_Q1IS59 NADH-quinone oxidoreductase subunit D 1 n=2 Tax=Acidobacteria RepID=NUOD1_ACIBL Length = 381 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 139/395 (35%), Positives = 223/395 (56%), Gaps = 26/395 (6%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 + + + + LN+GP HPS HG R++L+LDGE ++ IGY HRG EK+ E +++ Sbjct: 13 ENKTFLDSNELVLNMGPQHPSTHGVLRVILKLDGERVLGTECVIGYLHRGVEKIAENRTY 72 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 + PY DR++Y+ N + Y AVEKL + P R +RV+L+EL R+ SH++++ T Sbjct: 73 VQFNPYVDRMDYVAAVSNGLGYCEAVEKLIDVQAPPRAQFLRVILTELNRLASHMVWLGT 132 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 D+GA+TP+F+ F DR+++ + E G R+ FRIGG ++ G+++ + ++ D Sbjct: 133 HALDIGALTPLFYTFRDREEVLKIFEKYCGARLTTHAFRIGGCIYEAYEGFEKDVLDYCD 192 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + R+ YE N I R++G+ A + G TG LRA G+ +D+RKA+PY+ Sbjct: 193 KLGPRIDEYEGLLTGNRIWLQRTKGIGILNAADCKALGVTGPVLRAAGVKWDLRKAQPYA 252 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y+ DF++P G D + R M++++E+RQS+RIL Q + +P GP A P Sbjct: 253 AYDQVDFDVPTGEN-GDTFDRYMVRMQEMRQSIRILRQAVEKLPAGPTMAKVPKVL---- 307 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 P + IEA KG Y++ SDGS YR RVR PS Sbjct: 308 ---------------------KPPVGRIYHSIEAPKGELGYFIVSDGSLQPYRVRVRPPS 346 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +LQ + +RG+L++D++ +G++D V+ +VDR Sbjct: 347 FVNLQALDKMVRGALIADVVAVIGTLDIVLGEVDR 381 >UniRef50_Q2JFL7 NADH-quinone oxidoreductase subunit D n=81 Tax=Bacteria RepID=NUOD_FRASC Length = 482 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 161/432 (37%), Positives = 241/432 (55%), Gaps = 19/432 (4%) Query: 183 KAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCV 242 + + +T E + G E + + +N+GP HPS HG R+VL+++GE + + Sbjct: 52 TESANGRVYTVTGSDWEQILGVGEEENERIVVNMGPQHPSTHGVLRLVLEIEGETVTETR 111 Query: 243 PDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVN 300 IGY H G EK E ++W + + R +YL NE Y L+VE+L GIT VP+R Sbjct: 112 LVIGYLHTGIEKSCEYRTWTQAVTFLTRADYLSPLFNEAAYCLSVERLLGITEQVPERAT 171 Query: 301 VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFR 360 VIRVM+ EL RI SHL++++T ++GA T + F F +R+K+ DL+E ITG RM+ A+ R Sbjct: 172 VIRVMVMELQRIASHLVWLATGGMELGATTAMIFGFREREKVLDLLELITGLRMNHAYIR 231 Query: 361 IGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGT 420 GG+A DLP G +R +R FL MPKR+ Y + K R V A + GT Sbjct: 232 PGGLAQDLPDGAERAIRAFLADMPKRIREYHALLTGQPVWKARMVDVNVLDAAGCIALGT 291 Query: 421 TGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQC 480 TG LRA G+ +D+RK PY GYE ++F++P D + R ++++EE+ +SL+I++QC Sbjct: 292 TGPVLRAAGLPWDLRKTMPYCGYETYEFDVPTALE-GDSFARYLVRLEEMGESLKIVDQC 350 Query: 481 LNNMPEGPFKADHPLTTPPP----------------KERTLQHIETLITHFLQVSWGPVM 524 L+ + GP P ++ +E LI HF V+ G + Sbjct: 351 LDRLRPGPVMVADKKIAWPSQLSVGSDGTGNSLAYIRKIMGTSMEALIHHFKLVTEGFRV 410 Query: 525 PANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYL 584 PA + + IE+ +G Y++ SDG T +R VR PSF +LQ +PA G V+D+IV + Sbjct: 411 PAGQVYTQIESPRGELGYHVVSDGGTRPFRVHVRDPSFVNLQAVPALTEGGQVADVIVGV 470 Query: 585 GSIDFVMSDVDR 596 S+D V+ VDR Sbjct: 471 ASVDPVLGGVDR 482 >UniRef50_UPI0001C31275 NADH dehydrogenase I, D subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31275 Length = 413 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 145/389 (37%), Positives = 220/389 (56%), Gaps = 1/389 (0%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 ++ M +N+GP+HPS HG R++L L+GE + D P IGY H G EK E++++ IP Sbjct: 26 EQELMTVNMGPHHPSTHGVLRLILTLEGEMVRDVKPIIGYVHTGIEKTAEQKAYWKVIPV 85 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R++YL N + AVEKL + VP R +RV+ EL RI SHL+++ T D+G Sbjct: 86 VERMDYLSYYFNAYAFCGAVEKLLEVDVPKRAQYLRVIHMELNRIMSHLVWLGTSCIDLG 145 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 A+ ++ F +R+++ DL E +G RMH +F++GGV D+PRGW ++ F M +R Sbjct: 146 AIGVWWYCFREREQVLDLFEMSSGQRMHTRYFQVGGVIEDIPRGWTERVKRFTKTMRERS 205 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y +N I R + + L G TG LRATG +D+RKA PY Y++F Sbjct: 206 EQYSALLDRNEIFLQRMRHTGTVDEETLLGLGVTGPLLRATGNPWDLRKAAPYCSYDDFR 265 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F IPVG D Y R ++ E+ +S I++Q ++ +PEGPF + PP+ Sbjct: 266 FRIPVGTE-GDNYDRYRVRHAEILESCAIIDQAIDGLPEGPFITEDRKVALPPRHELATS 324 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +E LI HF V+ G +P E + IE+ +G ++ SDGS+ R +R PSF +LQ Sbjct: 325 MEALIHHFKLVTEGFRVPPGEVYHPIESPRGELGCFVRSDGSSKPARVHMRDPSFVNLQA 384 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 AA R + ++DL+ L +D ++ VDR Sbjct: 385 TAAATRDTYIADLVATLAMLDPILGGVDR 413 >UniRef50_D2R5G7 NADH dehydrogenase (Quinone) n=2 Tax=Planctomycetaceae RepID=D2R5G7_9PLAN Length = 404 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 148/401 (36%), Positives = 213/401 (53%), Gaps = 4/401 (0%) Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 E + LN GP HP+ H R+VL+LDGE +VD VPDIGY H G EK+GE Sbjct: 5 EKPSSTVKSEDYLWTLNFGPQHPATHTTLRLVLKLDGERVVDAVPDIGYLHSGFEKIGEH 64 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY 318 ++ Y+ TDR+ Y+ N + + AVEKL GI + R IR ++ EL RI+ HLL Sbjct: 65 LDFNQYVTVTDRMNYISPMANNVAWHGAVEKLMGIEITPRCKYIRTIICELARISDHLLS 124 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 D GA T +AF R++IYD+ E + G R ++ R+GG++ D+ +R+ Sbjct: 125 TGAMGLDTGAFTFFLYAFYQRERIYDIFETLCGARFTNSYTRVGGLSQDMTPLVIEKIRD 184 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 FL P+ + E+ +N I R +GV + A TG RA+G+ D+RK Sbjct: 185 FLRTFPQTIDDMERLVNRNRIFVDRMKGVGLLSKERATNMSATGPVARASGVTRDLRKDE 244 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD-HPLTT 497 PY Y + DF++ DC+ R +++ E+R+SL+I+ Q L N+P GP Sbjct: 245 PYLAYGDLDFQVCCAT-AGDCFARYYVRMAEMRESLKIVAQALENLPAGPVNVGMDDRAA 303 Query: 498 PPPKERTLQHIETLITHFLQVS--WGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRT 555 P K Q IE ITHF V G +P E + IEA G +YL DGS ++YR Sbjct: 304 LPSKAEVYQTIEGTITHFELVMLNRGFTVPNEEVYSAIEAPNGELGFYLVGDGSDVAYRA 363 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R R PSF H P IRG +SD++ LGS++ + +++DR Sbjct: 364 RCRPPSFIHFSLFPELIRGHTLSDVVAVLGSLNIIAAELDR 404 >UniRef50_C9LVK3 Proton-translocating NADH-quinone oxidoreductase, D subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVK3_9FIRM Length = 365 Score = 404 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 144/390 (36%), Positives = 218/390 (55%), Gaps = 26/390 (6%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 + LN+GP HPS HG ++ L+L GE I P +GY HRG EK+ E +++ + Sbjct: 1 MAEKSTYILNMGPQHPSTHGVLQVELELSGERIERAKPILGYLHRGIEKLMESRTYAQCL 60 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 PYTD+++Y+ N + + AVEKLAGI VP R +RV+ +EL RI SHL++I T + D Sbjct: 61 PYTDKLDYVSSMNNNLAWCTAVEKLAGIRVPLRAEYLRVIAAELNRIASHLVFIGTLLND 120 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 +GA T +AF DR+K+ DL + I G RM ++ R+GGVA D + + FLD++P+ Sbjct: 121 LGAATAFVYAFRDREKVLDLFDLICGARMSTSYIRLGGVAFDATEEFIEKTQAFLDYVPE 180 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 L Y+ N I R +GV+ A+EA +GA LRATG+ +D+R+ PYS Y+ Sbjct: 181 MLEEYDNLITGNEIFYARMKGVSPMTAEEAKALSLSGANLRATGVAYDIRRVEPYSVYDR 240 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 DFE+PVG + D + R ++++E+ +S +I+ Q L MPEG + Sbjct: 241 LDFEVPVGT-LGDDWDRYEVRLKEIGESAKIIRQALKEMPEGSCR--------------- 284 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 VS P + +E T+G +Y+ SDG+ YR +R PSF +L Sbjct: 285 ----------KVVSPNLRPPKGSVYHRVENTRGELGFYIVSDGTAKPYRVHIRRPSFVNL 334 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 Q + RG+LV+D +V ++D +M +VD Sbjct: 335 QALDPLCRGTLVADSVVVYSTLDPLMGEVD 364 >UniRef50_B2V8R2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=3 Tax=Aquificales RepID=B2V8R2_SULSY Length = 524 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 122/578 (21%), Positives = 225/578 (38%), Gaps = 58/578 (10%) Query: 21 VIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERL 80 ++ EL V+ L +V +L + L + D+ Sbjct: 1 MVEELLKPIKDLITDYSFNTENEIVIHTSDFNLAKVSQYLFRDLDCE--LATVVATDDDD 58 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 R + + YH +N +++ + E + + P NWYERE D+ Sbjct: 59 RFSDDRCFTIRYVYSYH----KKNVFFIVENKVKE---RFNSLANIIPALNWYEREIRDM 111 Query: 141 FGITFDGHPNLRRIMM-PQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKP 197 FG+ HP+ R +++ P+ + HPLRKD+ + FK Sbjct: 112 FGLVPLNHPDPRPLVLFPENFPSDLHPLRKDFDIKTRP------------------EFKS 153 Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 + E E + +GP H L GE I+ + HRG EK+ E Sbjct: 154 YGKYEYKEVEGEGVFNILVGPIHAGIIEPGHFRFSLAGEHILQLEIRHFWKHRGVEKLAE 213 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 ++ + ++ + + YV A+EKL+ +P R IRV+ +EL R+ +L Sbjct: 214 GKTAEEVLEIVPKVSGDHSYAHTLAYVQAIEKLSNTEIPKRAKYIRVLFAELERLMCNLN 273 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 ++ QDV F ++++ L +A+TG R + +IGGV+ DL + L+ Sbjct: 274 DVAWLFQDVAYSFGAQGMFILKEEVMRLNKALTGNRFNKNVLKIGGVSVDLNQEKINLII 333 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 + L ++ + Y+K + + R + + E G RA+ + D+RK Sbjct: 334 DKLGYITDKFEFYKKIIFDSASILDRFETTGRILYETVKELSCIGYTARASDLKSDIRKE 393 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 PY Y+ F DC+ R+ ++ ++ S+ I+++ L+++P+G Sbjct: 394 HPYLIYDKLTFTSQTFEE-GDCFARLKCRLSDIEDSISIIKEVLSDLPDGEIFTQ----- 447 Query: 498 PPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV 557 P+ + E +G Y++ +D R ++ Sbjct: 448 ----------------------SNPLPANRWTLGYSEGQRGNIMYFVKTDKEGKIDRLKI 485 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 R PSF + Q I A+ G +V+D + S++ + D Sbjct: 486 RDPSFNNWQAIQWAVLGDIVADFPLVNKSLNLSYAGTD 523 >UniRef50_Q7NI12 NAD(P)H-quinone oxidoreductase subunit H 1 n=3 Tax=cellular organisms RepID=NDHH1_GLOVI Length = 393 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 148/387 (38%), Positives = 231/387 (59%), Gaps = 2/387 (0%) Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 + M +NLGP+HPS HG R+++ LDGE +VDCVP +GY HR EK+ E ++ Y+PY Sbjct: 9 ERMVINLGPHHPSMHGVLRLIVTLDGENVVDCVPVLGYLHRSMEKIAESRTIIQYLPYVT 68 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R +YL E V A E+LAG+ VP R IRV++ EL RI SHLL++ F+ D+GA Sbjct: 69 RWDYLATMFTEAITVNAPEQLAGVQVPRRARYIRVIMLELSRIASHLLWLGPFMADIGAT 128 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 +P F+ F +R+ IYDL EA TG RM +FR+GGVA DLP GW R+F +++P ++ Sbjct: 129 SPFFYIFREREMIYDLFEAATGMRMMHNYFRVGGVAVDLPYGWVDKARDFCNYLPPKIDE 188 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 YE+ N I +GR +G+ G ++A+ WG +G LRA+G+++D+RK Y Y+ D+ Sbjct: 189 YERLITNNPIFRGRVEGLGYIGREDAINWGLSGPMLRASGVNWDLRKVDHYEIYDELDWN 248 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 + D R +++++E+R+S++++ Q L+ +P GP++ + + Sbjct: 249 VA-WDTGGDTLARYVVRIQEMRESVKMIRQALDQLPGGPYENLEAQRLSGGPKSEWNGFD 307 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 + S MP E + +EA KG YL D ST +R ++R P F +L +P Sbjct: 308 Y-QFIGKKSSPTFKMPRGEHYVRVEAPKGELGVYLIGDDSTFPWRWKIRPPGFINLAVLP 366 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++G+ ++DL+ LGS+D +M +VDR Sbjct: 367 KLVQGTKLADLMAILGSVDIIMGEVDR 393 >UniRef50_Q979M3 NADH dehydrogenase I chain D n=6 Tax=Thermoplasmatales RepID=Q979M3_THEVO Length = 369 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 138/391 (35%), Positives = 212/391 (54%), Gaps = 22/391 (5%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 E++ +N GP HPS HG R+ ++LDGE + D P IGY HR AEK+ E Q + + Sbjct: 1 MVMEEWTEVNFGPQHPSMHGVLRLKVKLDGEIVKDVEPIIGYLHRNAEKICELQFYCDNM 60 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 Y DR++Y+ E+ Y+ A EKL + P R IRVM+ EL RI SHL+++ F D Sbjct: 61 IYFDRMDYVAAMNMEIGYLEAAEKLLDVEPPGRAKWIRVMMGELNRIASHLVWLGAFGLD 120 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 +G +TP F+ F +R+KI + ++G R + IGGV D+ +++F+ PK Sbjct: 121 LGMLTPFFYCFKEREKILKIFTEVSGSRQQLNYMSIGGVYQDVTDEALDHIKQFITEFPK 180 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 L ++N I R++GV + A+++G TG LRA+G+++DVRKA PY Y+ Sbjct: 181 ELNMIANLFVKNDIFLSRTKGVGILSKEMAIDYGVTGPMLRASGVEYDVRKAEPYLVYDK 240 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 +F+IPV D R ++++EE+RQS++I++Q + +P GP+ + R Sbjct: 241 VNFDIPVSFK-GDNLARFLVRIEEMRQSVKIIDQTIQKLPAGPYFNQKAKKPLMIRLR-- 297 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 E + E+ KG Y+ DGS YR RVR+P+F +L Sbjct: 298 -------------------GQGEVYARTESPKGEFGVYIVGDGSLRPYRVRVRSPTFKNL 338 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +PA +G +++DLI GSID V +VDR Sbjct: 339 SVLPALAKGQMIADLISIGGSIDLVFGEVDR 369 >UniRef50_Q30PI1 NADH-quinone oxidoreductase subunit D n=45 Tax=Epsilonproteobacteria RepID=NUOD_SULDN Length = 412 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 143/405 (35%), Positives = 216/405 (53%), Gaps = 7/405 (1%) Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 + ++ M LN GP HPSAHG R++L L E IV PDIGY HRG EKM E Sbjct: 9 PFFENITFDREDNEMILNFGPQHPSAHGQLRLMLHLQQEMIVKAHPDIGYLHRGMEKMAE 68 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 ++ ++P TDR++Y+ N + LAVE+L G+ VP R VIR+ML E+ R+ SHL Sbjct: 69 NMIYNEFMPTTDRMDYIASSANNYGFALAVERLIGLEVPRRAKVIRMMLLEINRLMSHLF 128 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 +++T D+GAMT FAF +R+ + D++E G R+ A RIGGV D+ + L+ Sbjct: 129 WLATTALDIGAMTVFLFAFREREYLMDIMEGYCGARLTHAAIRIGGVPLDIQDTFITQLK 188 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 FLD +P+ + YE N I R + V + AL WG +G LRA+G+ +D+RK Sbjct: 189 TFLDKLPQNIKDYEDLLDTNRIWLMRMEEVGVISKEMALSWGCSGPMLRASGVAWDIRKE 248 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLN------NMPEGPFKA 491 PY Y+ +F +P D + R + +EE+R+S +IL Q ++ + A Sbjct: 249 EPYELYDEVEFRVPYSDK-GDNFARYRIYMEEMRESAKILYQTIDMYEKCVKDNQTELMA 307 Query: 492 DHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM 551 P PK + +L+ HF+ V+ G P E + E+ KG +Y+ S G Sbjct: 308 HAPKYISAPKLDIMTQNYSLMQHFVLVTQGMRPPVGEVYVATESPKGELGFYINSQGGPY 367 Query: 552 SYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR ++R PSF H + + G + D++ +G+ + V +VDR Sbjct: 368 PYRLKLRAPSFWHTGILTDILPGHYIPDVVSIIGTTNIVFGEVDR 412 >UniRef50_P56753 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic n=201 Tax=cellular organisms RepID=NDHH_ARATH Length = 393 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 149/395 (37%), Positives = 225/395 (56%), Gaps = 2/395 (0%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 MKR +D M +N+GP+HPS HG R+++ LDGE++VDC P +GY HRG EK+ E ++ Sbjct: 1 MKRPVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAI 60 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 Y+PY R +YL E V E+L I VP R + IRV++ EL RI SHLL++ Sbjct: 61 IQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGP 120 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 F+ D+GA TP F+ F +R+ +YDL EA TG RM +FRIGG+A DLP GW +F D Sbjct: 121 FMADIGAQTPFFYIFREREFVYDLFEAATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCD 180 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + + Y+K +N I R +GV G +EA+ WG +G LRA+GI +D+RK Y Sbjct: 181 YFLTEVVEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIPWDLRKIDRYE 240 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y+ F++EI D R ++++ E+ +S++I++Q L +P GP++ + Sbjct: 241 SYDEFEWEIQ-WQKQGDSLARYLVRLSEMTESIKIIQQALEGLPGGPYENLESRGFDRKR 299 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 E + S + E + +EA KG +L D S +R ++R P Sbjct: 300 NPEWNDFEYRFIS-KKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPG 358 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +LQ +P ++ ++D++ LGSID +M +VDR Sbjct: 359 FINLQILPELVKRMKLADIMTILGSIDIIMGEVDR 393 >UniRef50_C0Z770 NADH-quinone oxidoreductase chain D n=2 Tax=Bacillales RepID=C0Z770_BREBN Length = 382 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 144/389 (37%), Positives = 214/389 (55%), Gaps = 27/389 (6%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + M LN+GP HPS HG FR+V+++DGE I + +P +GY HRG EK+ E ++ IPY Sbjct: 19 RTEEMLLNVGPQHPSTHGVFRLVVKIDGETIKEAIPVMGYLHRGTEKLAENLTYTQIIPY 78 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 TDR++Y+ N AVE + G+ +P+R +R++ EL R+ SHL++ TF+ D+G Sbjct: 79 TDRMDYVSAMTNNYVLCHAVETMMGLEIPERAQFLRLIAMELNRVASHLVWWGTFLLDIG 138 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 AM P +AF DR+ I DL + G RM + R+GGV D P GW +EF+ +M K L Sbjct: 139 AMGPFLYAFRDRETILDLFNELCGARMTFNYMRVGGVKWDAPPGWVDKAKEFVQYMKKEL 198 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 +Y + N I R G+ + K AL++ +G LR+TG+ +D+RK PY Y+ F+ Sbjct: 199 NNYHQLVTGNEIFINRLIGIGKFDTKTALDYSLSGVMLRSTGVKWDLRKDEPYCIYDRFE 258 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQ 506 F++P DC R L++ E+ QSLRILEQ L P EG P Sbjct: 259 FDVPTATE-GDCMARYHLRMAEIEQSLRILEQALEQFPSEGEVMGKVPRV---------- 307 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 PA E++ IE+ +G Y+ S G +R + R PSF +LQ Sbjct: 308 ---------------IRPPAGETYVRIESPRGEIGCYIASQGKDKPWRLKFRRPSFTNLQ 352 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +P ++G +S+++ LGSID V+ +VD Sbjct: 353 ILPKLLQGENLSNMVAILGSIDIVLGEVD 381 >UniRef50_A8VSQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A8VSQ7_9BACI Length = 371 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 136/393 (34%), Positives = 209/393 (53%), Gaps = 23/393 (5%) Query: 203 KRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWH 262 + M LN+GP HPS HG FR+ L++DGE I P +GY HRG+EK+ E + Sbjct: 1 MPNELKTESMTLNMGPQHPSTHGVFRLQLEVDGETIQKATPIMGYLHRGSEKLAEGFLYT 60 Query: 263 SYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF 322 +IPYTDR++Y+ N Y +EKL VP+R +RV+ EL RI SHL++ T+ Sbjct: 61 QFIPYTDRLDYMNAMTNNYVYCQTIEKLLDWEVPERAEYLRVITMELNRIASHLVWWGTY 120 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDW 382 + D+GAM+P +AF DR+ I D + I+G RM + RIGGV D P GW + E ++ Sbjct: 121 LLDIGAMSPFLYAFRDRETILDRLNEISGARMTFNYHRIGGVKWDAPEGWIDNVLETVEE 180 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 + ++ ++ N + + R+ GV ++ L WG +G R +G++ DVRK PYS Sbjct: 181 LKHNISEFDTLVSGNEVFQARTIGVGVLSKEKVLNWGLSGPLARGSGVEVDVRKTEPYSV 240 Query: 443 YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE 502 Y++FDF++PV D Y R +++ E+ +SL+I+EQ N+PEG Sbjct: 241 YDHFDFDVPVEQE-GDVYARYKVRIREMHESLKIIEQACKNLPEGDI------------- 286 Query: 503 RTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSF 562 I + P E + EA+KG Y S+G YR ++R PSF Sbjct: 287 ---------IHKKGKKIMMIKPPEGEVYTRAEASKGEIGVYAISNGKNKPYRVKLRRPSF 337 Query: 563 AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 ++ + + G + +L+ GS+D V+ +VD Sbjct: 338 VNVSILQDMLIGESIQNLVAIFGSLDVVLGEVD 370 >UniRef50_A7H9V5 NADH-quinone oxidoreductase subunit D 2 n=8 Tax=Myxococcales RepID=NUOD2_ANADF Length = 431 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 146/384 (38%), Positives = 208/384 (54%), Gaps = 1/384 (0%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M +NLGP+HP+ HG R V++LDGE I DIG+ HRG EK E +W PYTDR+ Sbjct: 48 MTVNLGPSHPAMHGVTRAVVELDGEMIRSMKLDIGFLHRGFEKSCENVTWTQCFPYTDRL 107 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 Y+ +N + + LAVEKL + VP+R +RV+ SE+ RI HL + ++GAMT Sbjct: 108 NYVSSIMNNVGFALAVEKLCKLDVPERAKYLRVVTSEIHRICDHLTLVGAMAMELGAMTV 167 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +A R IYD + + G R+ + RIGGVA D P GW + LD + + + Sbjct: 168 FLYAIEARDIIYDRLAELCGARLTSNYGRIGGVARDTPDGWIEKTEKTLDRVKGYVDEID 227 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + +N I R++G +A+E G TG LRA+G +D+RKA PY Y+ DF+IP Sbjct: 228 QLVSRNRIFIDRTRGTGVVPRADAIELGFTGPCLRASGEPYDLRKAAPYLVYDRIDFDIP 287 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 VG D + R +++EE+RQS RI+ QC M G PPK IE L Sbjct: 288 VGTN-GDNFDRFQMRMEEMRQSDRIIRQCFAQMEPGEIAVQDFRYVLPPKPLVYGTIEGL 346 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 + HF + G +PA E++ EA G +Y+ SDG Y+ +R P + L +P Sbjct: 347 MAHFKIIMEGIQVPAGEAYGYTEAANGELGFYVVSDGGGRPYKLGLRAPGWPMLAALPFM 406 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVD 595 GSL+SDLI SI+ + +V+ Sbjct: 407 SVGSLLSDLIPTFDSINMIGGEVE 430 >UniRef50_Q67P19 NADH-quinone oxidoreductase subunit D 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOD1_SYMTH Length = 404 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 155/403 (38%), Positives = 236/403 (58%), Gaps = 5/403 (1%) Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 + + + M L++GP+HP+ HG R+ L+L+GE +V P+ G+ H G EK E Sbjct: 3 MAEDLHLEEQRPERMTLSIGPHHPATHGVLRVKLELEGETVVKAEPETGFLHTGIEKTAE 62 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRINSH 315 +W+ DR++YL N YV+AVEKL GI +P++ V RV+L EL R+ SH Sbjct: 63 HLTWNQATTVMDRMDYLSPISNNTGYVMAVEKLLGIEDRIPEKARVTRVILLELNRVASH 122 Query: 316 LLYISTFIQDVGAM-TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDR 374 L+ + T D G + TP+F+AF R +I D+ E TG RM+P++ R+GG+A+DLP + Sbjct: 123 LVGLGTGGLDYGNIGTPIFWAFELRDRILDIFEHTTGQRMNPSYMRVGGLAYDLPHNFKE 182 Query: 375 LLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDV 434 ++ +FL P R+ + L N I R++GV+ ++AL +G TG LR TG D+DV Sbjct: 183 MVEDFLKVAPGRIQELKDVMLHNPIFVDRAKGVSVITYEQALRYGLTGRNLRVTGSDYDV 242 Query: 435 RKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADH 493 RK PY GYEN+DF++PV D ++RV + +E+ +SL+I+ Q L+N+P + + D Sbjct: 243 RKYYPYLGYENYDFKVPVYTD-GDSWSRVAITFDEMFESLKIIRQALDNLPWDDRYIIDD 301 Query: 494 PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSY 553 PPK+ +E LI HF V G +PA E + IE+ +G +Y+ SDG Sbjct: 302 RKLVLPPKQEVKHSMEALIHHFKLVHHGFDVPAGEVYVSIESPRGEIGFYVVSDGGNKPM 361 Query: 554 RTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R RVR PSF + +P + G L+SD++ + +ID V +VDR Sbjct: 362 RVRVRPPSFYAVYSLPVLLEGHLLSDMVGAIATIDPVFGEVDR 404 >UniRef50_Q2RJU4 NADH-quinone oxidoreductase subunit D n=94 Tax=Firmicutes RepID=NUOD_MOOTA Length = 371 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 151/389 (38%), Positives = 220/389 (56%), Gaps = 26/389 (6%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + + LN+GP HPS HG +R +L LDGE++V IGY HRG EK+ E +++ IPY Sbjct: 9 RTEEIQLNMGPQHPSTHGVYRALLTLDGEKVVGVENIIGYLHRGIEKLAEDRTYTQVIPY 68 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 TDR++YL G +N + YV VEKL G+ VP+R +RV+++EL R+ SH++ +++ D+ Sbjct: 69 TDRLDYLAGMLNNLGYVQTVEKLLGLEVPERAEYLRVIMAELSRLASHMVMVASMALDLS 128 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T F F +R++I DL E G R+ ++ RIGGVA D+P G+ L FL+ +P+ + Sbjct: 129 GWTAWFPPFRERERILDLFEMTCGSRLTVSYMRIGGVAADIPPGFLPALESFLNDLPRMI 188 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 A N I K R QGV + AL +G TG LRA G+ FD+RKARPYS Y+ FD Sbjct: 189 AEMNGLITGNEIFKARCQGVGKIDLETALAYGITGPNLRACGLPFDLRKARPYSIYDRFD 248 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F+IP D Y R ++++ E+ QS RI+ Q + +P+GP +A P Sbjct: 249 FDIPTLNN-GDSYDRFVIRLLEMEQSARIIRQAMEQLPDGPVQAKVPRVL---------- 297 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 +P E + IE KGI +YL SDG + YR + +PSF +L Sbjct: 298 ---------------KLPRGEVYHQIEGAKGILGFYLVSDGGSKPYRLHIHSPSFVNLGA 342 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P G + D +V + SID V+ +VDR Sbjct: 343 LPRISVGGTIQDFVVNIASIDIVLGEVDR 371 >UniRef50_A5UXK3 NADH-quinone oxidoreductase subunit D 1 n=20 Tax=cellular organisms RepID=NUOD1_ROSS1 Length = 374 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 153/392 (39%), Positives = 221/392 (56%), Gaps = 19/392 (4%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 + +N+GP HPS HG FR+++ +DGE IVD P GY HR E++ E ++ + Sbjct: 1 MLQTQELQINIGPQHPSTHGVFRMIVTVDGETIVDLKPVFGYLHRNHEQLAEVSTYIQSM 60 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 PYTDR++Y N LAVEKLAGI+VP R IRV++ EL RI +H + + D Sbjct: 61 PYTDRLDYFNSMANNHALALAVEKLAGISVPQRAEYIRVLMVELTRILNHASAVGFLLND 120 Query: 326 VGA-MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 +GA TP+ F +R+KI DL E +G RM +FR GGV DLP + L+E + +P Sbjct: 121 MGAWQTPLMFGMREREKILDLFEMASGARMMCNYFRFGGVWRDLPPEFIPQLKELMQGLP 180 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 +E+ +N IL R+ V + A+ + TG LRA+GI +DVR+A PYS Y+ Sbjct: 181 SFFDEFERLLKENEILLSRTINVGVLPKEVAVSYSVTGPVLRASGIPYDVRRAEPYSVYD 240 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 DF+IP+G V D Y R ++++EE+RQS RIL+Q + +P+ +P K++ Sbjct: 241 ELDFDIPIGS-VGDVYDRFLIRIEEMRQSYRILQQVIERLPDTTGGHINPAMANIGKQKA 299 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 L P +++ IE+ KG +YL SDGS YR +VR PSF + Sbjct: 300 L-----------------RPPPGDAYARIESPKGELGFYLVSDGSERPYRYKVRAPSFIN 342 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 L + RG V+D++V LGSID VM +VD+ Sbjct: 343 LTPLGDMCRGHKVADVVVILGSIDIVMGEVDK 374 >UniRef50_UPI00016C492D NADH dehydrogenase subunit D n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C492D Length = 409 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 140/395 (35%), Positives = 215/395 (54%), Gaps = 6/395 (1%) Query: 207 ENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 + E LN GP HP+ H R++L LDGE IV VPDIGY H G EK+GE ++ Y+ Sbjct: 16 DQEFLYTLNFGPQHPATHTTLRLILTLDGETIVKAVPDIGYLHSGFEKLGEDLDFNQYVT 75 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 DR+ Y+ NE + VEKL GI + R +R +L+EL RI+ HLL + D+ Sbjct: 76 IVDRMNYISPFANECAWFTTVEKLIGIELTPRCKYLRTILAELARISDHLLCVGAAALDL 135 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 GA+T +AF R+K+Y+++EA +G R HP++ R+GG+ D+ L+R+F+ K Sbjct: 136 GALTGFLYAFNAREKVYNIMEAASGQRFHPSYCRVGGLMADVNDDVVALIRDFVKTFRKV 195 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 A + +N I R++G+ ++A+ +G RA+G+ D+RK PY Y+ Sbjct: 196 HADICRLLNRNRIFIDRTKGIGVLSKEDAINTSCSGPVARASGVVRDLRKDEPYLAYKEL 255 Query: 447 D--FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD-HPLTTPPPKER 503 F+I V G DCY R ++++ E+ +S +I+ + N+P GP D + T P K Sbjct: 256 SGAFKI-VCGKGGDCYNRYLVRMGEMLESWKIINAAVENLPSGPVNVDLNDKLTIPDKNA 314 Query: 504 TLQHIETLITHFLQVSWGPV--MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 T + IE LI HF W P E + E G +YL +DG+ ++R R R PS Sbjct: 315 TYRSIEGLIQHFELFMWNRRWETPVEEVYGANETANGELGFYLVADGTGKAFRARTRPPS 374 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F H P + G +SD+ LGS++ + +++DR Sbjct: 375 FIHFAVFPMMMEGHQISDVPAVLGSLNIIAAELDR 409 >UniRef50_D2PDB9 NADH dehydrogenase (Ubiquinone) n=10 Tax=Sulfolobaceae RepID=D2PDB9_SULIS Length = 410 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 126/386 (32%), Positives = 198/386 (51%), Gaps = 2/386 (0%) Query: 211 FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDR 270 LN+GP HP + G RI ++L+G+ I D D+GY HR EK+ E +++ IP +R Sbjct: 27 QGELNVGPQHPGS-GHMRIFVKLNGDIIEDVDLDVGYVHRTVEKLSENRNYMHLIPLVER 85 Query: 271 IEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT 330 L + Y++AVEK+ G+ VP+R +R +E+ RI SHL + +G T Sbjct: 86 PAILDSIHMNLGYIIAVEKILGVDVPERAQYLRSFAAEVNRIASHLYGLGILSIFLGHST 145 Query: 331 PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASY 390 + F DR+ ++EA+TG R+ ++ GGV D+ + + + + + +RL + Sbjct: 146 GFMWGFGDREVWVTILEALTGARVTNSYVIPGGVRRDISQEIKDMTLKAISYQRRRLEDW 205 Query: 391 EKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI 450 +K N ++ R + V + A++WG G LRA+G+ +DVRK PY Y+ DFEI Sbjct: 206 KKIFFYNPSIRARLENVGVMSKENAIKWGAVGPNLRASGVYYDVRKIEPYGAYDKLDFEI 265 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 PV D R ++++EE+ QS+RILEQ + N+PEG +D PP Sbjct: 266 PVYKE-GDGLARGLVRLEEIEQSMRILEQIIKNIPEGNILSDRFFKQIPPTRLKKYWETY 324 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 P E+ +EA +G YY+ SDGS YR R+ TPS+ + Sbjct: 325 RRIVLPGYYASFRPPKGEAISRVEAGRGELVYYVVSDGSPKPYRLRMITPSYRSIYVFKE 384 Query: 571 AIRGSLVSDLIVYLGSIDFVMSDVDR 596 +GS +DL+ GS+D+ + DR Sbjct: 385 LCKGSRYADLVSIYGSLDYFPPEADR 410 >UniRef50_A1ALP2 NADH-quinone oxidoreductase subunit D n=1 Tax=Pelobacter propionicus DSM 2379 RepID=NUOD_PELPD Length = 403 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 142/404 (35%), Positives = 217/404 (53%), Gaps = 1/404 (0%) Query: 193 LTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGA 252 + +K T + + + +N+GP+HP+ HG +I+ LDGE + GY HRG Sbjct: 1 MEYKSPVRSNLEQTADPNHVLVNMGPSHPATHGTIQIIAALDGERVAKADIHCGYLHRGF 60 Query: 253 EKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRI 312 EK E ++H IP+TDR+ Y N YV VEKL GI + R +R +L+E R+ Sbjct: 61 EKESEHHTYHKIIPFTDRLNYCSALNNNFAYVEGVEKLLGIELTPRCIYLRTLLAEYNRV 120 Query: 313 NSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGW 372 H+ ++ + ++GAMT + T R I++ + +TG R+ ++ R+GG+ +DLP GW Sbjct: 121 ADHVTCVAATVMEMGAMTAFLYLMTIRDYIFEHLNQLTGARLTYSFARVGGLKNDLPDGW 180 Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 L E L + K +N I R++ V A + AL WG TG LR+TG Sbjct: 181 LERLEEILQFTEKYCGRIHGLLDRNRIFIDRTRDVGAMSPEHALNWGYTGPILRSTGAKI 240 Query: 433 DVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD 492 D+RK PY Y + DFE+PVG D Y R +++ E+ +S+ ++ QC+ +P+GP D Sbjct: 241 DIRKDNPYLAYADLDFEVPVGIK-GDNYDRYYVRMREIDESISMVRQCMKKLPDGPVNID 299 Query: 493 HPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMS 552 P K++ IE LI+HF V G +PA E + EA G +YL SDGS Sbjct: 300 DRRIMYPTKDKVYTKIEYLISHFKLVIDGIQVPAGEIYVSHEAPNGELGFYLISDGSGRP 359 Query: 553 YRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 Y+ VR+PSFAH+ + + G V+D+I GS++ + + DR Sbjct: 360 YKLHVRSPSFAHMGGMHTLLEGYQVADVIATFGSMNMIGGECDR 403 >UniRef50_C6X0Z4 NADH-ubiquinone oxidoreductase chain D n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0Z4_FLAB3 Length = 420 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 148/420 (35%), Positives = 219/420 (52%), Gaps = 1/420 (0%) Query: 176 FSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDG 235 + + + + + + + LNLGP HP+ HG F+ VL +DG Sbjct: 1 MTTYRPSIINHNNMKDNALSNILNQHDAKDQIDGQLYTLNLGPTHPATHGIFQNVLTMDG 60 Query: 236 EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITV 295 E I+ IGY HR EK+ ER+++ TDR+ Y +N + + L VEKL G V Sbjct: 61 ERILHSEQTIGYIHRAYEKISERRNFTQITTLTDRMNYCSAPINNIGWHLTVEKLIGCEV 120 Query: 296 PDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMH 355 P RV+ +RV++ EL RI H++ D GA+T + + F +R+KIY++ E + G RM Sbjct: 121 PKRVDYMRVIMMELARIADHMVCNGVIAMDAGAITGLTYLFQEREKIYEMYEQVCGARMT 180 Query: 356 PAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEA 415 RIGG D + LL+ +L PK + + +N I R+ V A+ A Sbjct: 181 TNMGRIGGFERDFNDKFHELLQTWLKRFPKIWSEFCALNERNRIFMDRTINVGPISAERA 240 Query: 416 LEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLR 475 L +G TG LRA G+D+DVR A PYS Y +FDF IPVG D Y R M++ +E+ +SL+ Sbjct: 241 LSYGFTGPNLRAAGVDYDVRVASPYSSYNDFDFIIPVGS-AGDTYDRFMVRQQEVWESLK 299 Query: 476 ILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEA 535 I+ Q N+P+GPF AD P P K ++E LI HF V +P E + +E Sbjct: 300 IINQAYKNLPDGPFHADVPEFYLPEKADVYNNMEALIYHFKIVMGETDVPIGEVYNCVEG 359 Query: 536 TKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 G +YL SDG YR R P F + Q P I+G ++SD +V + S++ + ++D Sbjct: 360 GNGELGFYLVSDGGRTPYRLHFRRPCFIYYQAYPEMIKGGMISDAVVTMCSMNVIAGELD 419 >UniRef50_A5FKI7 NADH-quinone oxidoreductase subunit D n=17 Tax=Bacteria RepID=NUOD_FLAJ1 Length = 412 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 149/406 (36%), Positives = 216/406 (53%), Gaps = 2/406 (0%) Query: 191 EALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHR 250 + + + + LNLGP HP+ HG F+ +L +DGE I++ P IGY HR Sbjct: 7 PPEHRYAKIIKERHNEDGSELSVLNLGPTHPATHGIFQNILLMDGERILEAEPTIGYIHR 66 Query: 251 GAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELF 310 EK+ E + ++ P TDR+ Y +N M + + +EKL GI VP R +RV++ EL Sbjct: 67 AFEKIAENRPFYQITPLTDRMNYCSSPINNMGWWMTLEKLLGIEVPKRAQYLRVIVMELA 126 Query: 311 RINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPR 370 RI H++ S D GA T + F R+KIY++ E I G R+ RIGG D Sbjct: 127 RITDHIICNSILGVDTGAYTGFLYVFQFREKIYEIYEEICGARLTTNMGRIGGFERDWSP 186 Query: 371 GWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI 430 R L +FL+ P +E +N I R+ V A++A+ +G TG LRA G+ Sbjct: 187 EAFRKLDKFLEEFPPAWKEFENLFERNRIFLDRTVNVGGITAEKAMAYGFTGPNLRAAGV 246 Query: 431 DFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEG-PF 489 D+DVR A PYS YE+FDF +PVG D Y R ++ E+ +SL I+ Q L MP G + Sbjct: 247 DYDVRVAHPYSSYEDFDFIVPVG-KSGDTYDRFCVRNAEVWESLSIIRQALEKMPAGNEY 305 Query: 490 KADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS 549 A+ P PPKE +E+LI HF V +P +E + +E G +YL +DGS Sbjct: 306 HAEVPDYYLPPKEDVYNSMESLIYHFKIVMGEVPVPVSEIYHAVEGGNGELGFYLATDGS 365 Query: 550 TMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 YR R P F + Q P I+G+L+SD I+ L S++ + ++D Sbjct: 366 RTPYRLHFRRPCFIYYQAFPEMIKGALLSDAIIILSSLNVIAGELD 411 >UniRef50_B9L625 NADH-ubiquinone oxidoreductase n=3 Tax=Epsilonproteobacteria RepID=B9L625_NAUPA Length = 549 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 140/553 (25%), Positives = 240/553 (43%), Gaps = 40/553 (7%) Query: 50 REQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIML 109 ++ LL V LK + D + V Y L + +++ L Sbjct: 31 KDDLLNVIKDLK--QAGVKTCSTVSPTDF--------IDENKIEVNYFLEDLFGKKNVWL 80 Query: 110 KVALAEN--DLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG-HPLR 166 KV + + + + + T L P+ANW+E E + FG+ F GHP+LR ++ + + G P R Sbjct: 81 KVDIERDLENCEIDSITPLMPSANWHELEAYSTFGVKFKGHPDLRYFLISRDYYGKFPFR 140 Query: 167 KDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGA 226 KD+ +A E + + + E E+ G LN GP HP++ G Sbjct: 141 KDFDWKAHEENLIQNINDITEEYFEEYEEHEEKLG-----HEGSRTVLNWGPTHPAS-GP 194 Query: 227 FRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLA 286 R+ + +GE I PDIGY R E + ER+ + I +RI ++ + Y A Sbjct: 195 IRLKVYTNGENIEKIEPDIGYVWRALEHLAERKDFIGTIVAVERICFMDNPNPMICYSQA 254 Query: 287 VEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLV 346 VE++AG + + +RV+L E RI SHL+ + F +G T + + R+ D++ Sbjct: 255 VEEIAGKEITEFAKYMRVILGETGRIASHLISLGGFFGTMGLHTFMMWCLDIREYFLDVL 314 Query: 347 EAITGFRMHPAWFRIGGVAHDLPR--GWDRLLREFLDWMPKRLASYEKAALQNTILKGRS 404 E +G R+ A GGV + L W + + + A ++N ++ R+ Sbjct: 315 EDYSGARIATACVEPGGVRYPLNDYKAWFEGINKAIKKFEDTKADITDIFMKNPLMNTRA 374 Query: 405 QGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVM 464 +G + + E+ G RA+G DVR PY+ Y+ + E D R+ Sbjct: 375 KGNGVFTLDDVAEYYLAGPIARASGAKIDVRIDEPYAAYDKLEMEYATCEN-GDARDRLY 433 Query: 465 LKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVM 524 + +EL Q++ +++Q + + EG ++ E V M Sbjct: 434 IIFKELEQAMDLIKQAMAKIEEG-----------------IEAGEMDPKKDHLVKMPKRM 476 Query: 525 PANESFQMIEATKGINSYYLTS-DGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVY 583 PA E+ IE +G +L + + ST YR +++ PS H + +RG +SD+ + Sbjct: 477 PAGEAVSRIEWARGEILMHLVTQEKSTSPYRLKIKAPSVNHTMMLDKLLRGKTLSDIPLL 536 Query: 584 LGSIDFVMSDVDR 596 GS+ D+DR Sbjct: 537 YGSMHICQGDLDR 549 >UniRef50_A1AUU6 Ech hydrogenase subunit E n=3 Tax=Bacteria RepID=A1AUU6_PELPD Length = 409 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 107/383 (27%), Positives = 192/383 (50%), Gaps = 28/383 (7%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + +GP HP+ + + GE+IV +GY+HRG EK E +S+ + +RI Sbjct: 6 IPIGPQHPALKEPANFSITVTGEKIVTTSMRLGYNHRGIEKACEERSYLQCLYLLERICG 65 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + + Y+ AVE++AG+T+P R N IR ++ EL RI+SHLL++ ++G T + Sbjct: 66 ICSHTHSTAYIQAVEEIAGLTIPPRANYIRSLVGELERIHSHLLWLGVAGHEIGFDTLLM 125 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 +++ DR+ + D++ + G R++ +GGV D+ ++R ++ + +R Y + Sbjct: 126 YSWRDRELVMDILAELGGNRVNYGINTLGGVRRDITPEQIEMIRNSVNTLEERTKYYIEV 185 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 A + L R GV ++AL G LRA+ +D D+R+ PY+ Y + DF + + Sbjct: 186 ATEEPTLAARLAGVGYLSHEDALLLSAVGPTLRASNVDRDIRRDDPYAAYGSLDFRV-IT 244 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D Y R +++V EL +S R++ Q LN +PEG P Sbjct: 245 DDHCDVYGRTLVRVGELMESFRMIRQILNELPEGEVSVKAPR------------------ 286 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 +PA E+ EA +G +Y+ ++G+ R +VR +FA++Q + + Sbjct: 287 ---------KIPAGEACSRYEAPRGECFHYIRANGTDKPERVKVRASTFANIQAVAKMME 337 Query: 574 GSLVSDLIVYLGSIDFVMSDVDR 596 + ++D+ + + +ID S DR Sbjct: 338 NNNLADVPIIVAAIDPCFSCADR 360 >UniRef50_D2LAG1 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2LAG1_9DELT Length = 409 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 106/406 (26%), Positives = 184/406 (45%), Gaps = 25/406 (6%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 L GP HP + L ++ E +++ +P +GY HRG E++ E + ++ I +R+ Sbjct: 6 LPFGPQHPVLPEPLHLKLTIENETVIEALPTLGYVHRGLERLCEIRDFNQMIQIVERVCG 65 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + C++ + Y VE++ G+ VP R +R + EL R++SHLL++ F G + Sbjct: 66 ICSCLHALCYCEGVEQIMGVEVPRRAKYLRTIWGELHRMHSHLLWLGLFADAFGFESLFM 125 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + R++I D++EA G R+ + IGGV DL + + L K + + Sbjct: 126 QFWRVRERIMDIMEATCGNRVVVSVNVIGGVRRDLSPEQCLWIEQQLALSEKEIKQLQTT 185 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 L + +K R+ G+ ++A + G G LR +G D R+ Y+ ++ FE PV Sbjct: 186 ILNDYTVKKRTVGIGVLSKEKAYQLGAVGPMLRGSGWAQDARQT-GYAAFDELGFE-PVV 243 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGP--------FKADHPLTTPPPKERTL 505 D Y R ++ E QS+ I+ + MP G + D P + R + Sbjct: 244 EYGGDSYARCAVRFRETLQSIDIVRLAIARMPAGETSVNVEGAMEDDTPRPVVAGERRDI 303 Query: 506 QHIETLITHFLQVSWGPV---------------MPANESFQMIEATKGINSYYLTSDGST 550 H + P P E+ +E +G YY+ +GS Sbjct: 304 MQAYNRDKHHKITAAPPPNLDLPTGLVAAKVKGKPDGEAVTRVEQPRGELMYYIKGNGSK 363 Query: 551 MSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R R+RTP+FA++ + A + G ++D+ V + SID +S +R Sbjct: 364 NMERVRIRTPTFANIPPLLAILPGCELADVPVIVLSIDPCISCTER 409 >UniRef50_B8DS05 NADH dehydrogenase (Quinone) n=7 Tax=Deltaproteobacteria RepID=B8DS05_DESVM Length = 406 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 141/395 (35%), Positives = 214/395 (54%), Gaps = 24/395 (6%) Query: 202 MKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSW 261 + + LN+GP HPS HG R++L+LDGE IV P +GY HR EKM E ++ Sbjct: 36 RFEQGARPESLILNMGPQHPSTHGVLRVLLELDGEYIVRAEPVLGYLHRMHEKMAEVKTP 95 Query: 262 HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST 321 ++P R++YL YV AVEKLAGI +P+R +RV+ EL RI+SHLL+ Sbjct: 96 AQFMPNMGRVDYLHALAWNWAYVGAVEKLAGIEIPERAEYLRVITCELNRISSHLLWWGA 155 Query: 322 FIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 ++ D+GA TP+ +AF DR+ + DL++ +TG R+ + FR GGV D + + +R+F+ Sbjct: 156 YLLDLGAFTPIMYAFDDREMLLDLLQLMTGSRLTYSSFRFGGVYTDASPAFVQGVRQFIP 215 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + RL Y +N IL+ R + V +G +G R +GI +DVR+A PYS Sbjct: 216 HLRSRLPMYTALVTENIILRRRIEEVGVIPQDMVTRYGASGPVARGSGIAYDVRRAEPYS 275 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 Y+ FD+EIPV R M+++ E+ QSLRI+EQ + N+P+G Sbjct: 276 VYDRFDYEIPVRHEEC-SMARYMVRMAEIEQSLRIVEQAIENLPDGEHM----------- 323 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 H +PA ES+ +E +G ++ SDG YR ++R P Sbjct: 324 ------------HPKAPKPSFKLPAGESYFAVEGARGKIGVWIASDGGKTPYRVKLRAPG 371 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F++L RG+L++D + LGS+D V+ ++DR Sbjct: 372 FSNLALFAECARGTLLADAVAILGSLDMVIPEIDR 406 >UniRef50_B5Y915 EchE n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y915_COPPD Length = 360 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 113/385 (29%), Positives = 187/385 (48%), Gaps = 27/385 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 LGP HP+ I LQL+GE +VD IG+ HR EK ++++ + +R Sbjct: 3 YKFPLGPYHPAFEEGEYIELQLEGEMVVDAEIKIGFIHRAIEKSATKRTFIRDLGLVERT 62 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + Y LAVEK AG+ VP+R IRV+ +EL RI+SHL+Y+ +G T Sbjct: 63 CGICSFHHSWAYCLAVEKAAGLEVPERAEYIRVLTAELERIHSHLMYLGAMAHKMGFDTL 122 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 F ++ R+ + D++E ++G R++ A +GGV D+ ++ L+ + + Sbjct: 123 FMFTWSGREAVMDMLELLSGNRVNYAINTLGGVRRDVDESISSQIKAALETLEDLGLKLK 182 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 ++ + R++ V KEA G G R +GI D+RK PY+ Y DF++ Sbjct: 183 DTWSKDASILARTKNVGIVSRKEAHLLGVVGPTARGSGIREDLRKTAPYAVYPLLDFDLV 242 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 V D ++R ++V E+ +S++I+ Q L+ MP G K P+ P + Sbjct: 243 VLDD-GDVWSRTFVRVLEVLESIKIIRQVLDKMPAGQIKNPKPVLKIEPND--------- 292 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 +EA +G +Y+L +DG+ R ++RTP+ +L Sbjct: 293 -----------------VIGRVEAPRGELAYHLITDGTDKPGRLKIRTPTLINLPASEHM 335 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 +RGS ++D V +G ID MS +DR Sbjct: 336 MRGSNLADAPVIVGHIDPCMSCMDR 360 >UniRef50_C1AB36 NADH-quinone oxidoreductase chain D n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB36_GEMAT Length = 412 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 134/391 (34%), Positives = 211/391 (53%), Gaps = 1/391 (0%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 +D + +N+GP+HP+ HG +I+ +LDGE+++ GY HRG EK E +WH+ I Sbjct: 23 PSRDDTVVVNIGPSHPATHGTVQIIAELDGEKVLRTDVHCGYLHRGFEKECEDHTWHNLI 82 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 PY DR+ Y +N Y VE+L GI + R +R +LSE R+ HL ++ + + Sbjct: 83 PYVDRLNYCSALINNFAYCDGVEQLMGIEITPRTKYLRTLLSEYSRLADHLTCVAASLME 142 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 +GAMT + T R +Y+ + A+TG R+ ++ RIGG+A D+P GW + L E L + Sbjct: 143 LGAMTAFLYLVTVRDSMYEHLAALTGARVTYSYGRIGGLAADVPDGWFKRLGEILRDYEQ 202 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 +N I R + V +AL WG TG LR+TG D+RK PY Y Sbjct: 203 YAERVHGLVDRNRIFIDRLRNVGTINTADALHWGFTGPVLRSTGAKRDLRKDTPYLAYAE 262 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 DF++PVG D Y R +++ E+ +S+ ++ Q ++ +P+GP D P K+ Sbjct: 263 LDFDVPVG-IFGDNYDRYYVRMREMDESVYMIRQLMDMIPDGPINVDDRRCVFPEKQLVY 321 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 IE+LI HF V GP +PA +++ E G +Y+ S G + Y+ VR+PSF H+ Sbjct: 322 SEIESLINHFKLVMEGPAVPAGDAYVAHEGANGELGFYIVSTGEGVPYKVHVRSPSFVHM 381 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G ++D++ GSI+ + + DR Sbjct: 382 GGAHRMLDGYQLADIVTSFGSINMIGGECDR 412 >UniRef50_B3VS74 NADH-ubiquinone oxidoreductase chain 49kDa n=4 Tax=Bacteria RepID=B3VS74_DESVM Length = 358 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 106/388 (27%), Positives = 183/388 (47%), Gaps = 30/388 (7%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 + GP HP + L ++ E IV+ +P +GY HRG E + + ++ + Sbjct: 1 MSRTIIPFGPQHPVLPEPLHLKLVVEDETIVEAIPALGYVHRGLETLASIRDYNQMVYIV 60 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +R+ + C++ M Y +E + + VP R +RV+ SEL RI+SHLL++ F G Sbjct: 61 ERVCGICSCIHAMCYCQGLETMMNVEVPSRAKYLRVIWSELHRIHSHLLWLGLFADGFGF 120 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 + + R+++ D+ EA G R+ + +GGV DL + R + + LD + K L Sbjct: 121 ESLFMQFWKIRERVMDINEATAGNRVVISVNVVGGVRRDLDKTQQRWILDELDKLEKELR 180 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 K L + +K R+ GV A++A++ G G LR +G+ D R+ Y+ ++ DF Sbjct: 181 QLMKTMLDDYTVKKRTVGVGVLTAEQAIQLGAVGPTLRGSGVAQDARQ-LGYAAFDELDF 239 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 E PV D + R ++ E QS+ I+ Q ++ +P+ A P Sbjct: 240 E-PVTSPEGDSWARSKVRFMETLQSMDIVRQAISRLPDSELAAKVPG------------- 285 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI 568 P E +E +G YYL +GS R R+RTP+FA++ + Sbjct: 286 ---------------KPTGEVVCRVEQPRGELLYYLKGNGSKNMERVRIRTPTFANIPPL 330 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 A + G+ ++D+ + +ID +S +R Sbjct: 331 LAMLPGAQLADVPIAALTIDPCISCTER 358 >UniRef50_C5CEV3 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV3_KOSOT Length = 402 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 106/391 (27%), Positives = 187/391 (47%), Gaps = 31/391 (7%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 L +GP HP A ++LDGE +VD + G+ HRG EK+ E ++ I Sbjct: 1 MSKEFNLPVGPFHPLLEEAEYFKIKLDGERVVDIEMETGWMHRGIEKISEESTFDQSIFV 60 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +RI + + + A E + I VP + IR ++ EL R++SHLL++ +G Sbjct: 61 VERICGICSASHPFACINAFEDIGEIEVPLKARYIRSLIGELERVHSHLLWLGLAGHFIG 120 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T +A+ R+ + +++E ITG R H F+IGGV D + ++ E LD++ K+L Sbjct: 121 YDTLWMWAWKYREPVLEVIEMITGNRNHYGTFKIGGVRRDYDVSLNSVVHEKLDFLEKKL 180 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 KA + +++ R GV +EA+ + G RA+G+ DVRK PY+ Y+ D Sbjct: 181 TMVAKAVANDPVVRSRLCGVGVLTKEEAISYCAVGPTARASGVAIDVRKDEPYAAYDLLD 240 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM--PEGPFKADHPLTTPPPKERTL 505 F + V D + + ++++ E+ +S++++ Q + + +GP D Sbjct: 241 FGVVV-REEGDIFAKTVVRILEVFESIKMIRQIIEKLRKVKGPIYNDVK----------- 288 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 +PA E EA +G +Y+ +DGS R ++R PS+ ++ Sbjct: 289 -----------------EIPAGEGIGRHEAPRGEVFHYIRTDGSNRPVRHKIRAPSYVNI 331 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 A+ G ++D+++ L S+D +R Sbjct: 332 PTYKASCIGENLADVLITLASVDPCYCCTER 362 >UniRef50_Q1AVI6 NADH-quinone oxidoreductase subunit D n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=NUOD_RUBXD Length = 396 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 139/398 (34%), Positives = 210/398 (52%), Gaps = 27/398 (6%) Query: 200 WGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ 259 R + + +N+GP HP+ HG R++L+LDGE IV C P +GY HR EK+ E + Sbjct: 25 DPDIRDEFGLETLDMNMGPQHPAMHGLLRLILELDGETIVRCDPVMGYLHRCQEKIAENR 84 Query: 260 SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYI 319 ++ + IP TDR++Y NE Y LAVE L G+ +P R IRV++ EL RI SHL I Sbjct: 85 TYPAVIPLTDRLDYFANMHNEHGYCLAVEDLLGVEIPPRAEYIRVLMCELMRIASHLPSI 144 Query: 320 STFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREF 379 + ++GA TP+ +AF +R++I + EA+TG RM + RIGGV DLP + E+ Sbjct: 145 GFLLLELGAFTPILYAFRERERIQNFFEAVTGARMMFHYIRIGGVKADLPPDIPEKIWEY 204 Query: 380 LDWMPKRLA-SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 ++ + KR+ + N I R++G++ +EA+E G TG LR TG+ FDVR+ Sbjct: 205 VEGLEKRIKPDFIDLIEGNEIFIERTRGISRLTQEEAIELGLTGPPLRCTGVAFDVRRDY 264 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PYS Y DFE+ V D ++++E+ +S++I+ QCL MPEG D Sbjct: 265 PYSVYPELDFEV-VTDTAGDVEASYRVRIKEVYESIKIIRQCLEKMPEGEVMGD------ 317 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 V P E F +E +G + ++ SDGS YR R Sbjct: 318 -------------------VGRRVRPPEGEGFGRVEGPRGEFAVHVVSDGSDTPYRVHYR 358 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PSF ++Q + + G + D++ +G +D V D+ Sbjct: 359 DPSFVNMQLLQEKMPGHYLPDIMPIMGLVDPVSGGWDK 396 >UniRef50_Q609T9 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T9_METCA Length = 527 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 114/496 (22%), Positives = 179/496 (36%), Gaps = 46/496 (9%) Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW- 160 ++L+ L +P+ T FP A ER T DL G+ F GHP+ RR + Q W Sbjct: 75 KSGDYLLLRTVLPPGRTGLPSHTPHFPGAARPERHTRDLLGLKFIGHPDDRRWVRHQAWG 134 Query: 161 -KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPN 219 + PLR D+P + + + + +GP Sbjct: 135 EREFPLRPDFPLAGQPPAVTAPDR----------------SYGFASAHGPEVNEIPVGPV 178 Query: 220 HPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 H GE +++ +GY H+G EK+ + R+ + Sbjct: 179 HAGIIEPGHFRFLALGETVLNLEERLGYVHKGIEKLAVGRDPEGLARLAGRVSGDTTVGH 238 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDR 339 A+E AG+ P+R +R + E R+ +HL I D R Sbjct: 239 AWAACQAMEHAAGVAPPERALWLRAIFIERERVANHLNDIGAICNDTAFAFGHSQFSRLR 298 Query: 340 QKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTI 399 + G R+ GGVA DLP + + + L + ++TI Sbjct: 299 ELWLRDNLRWFGHRLLMDRIVPGGVAVDLPAEATSAMPAAMAALRSELEELKPILDESTI 358 Query: 400 LKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDC 459 + R G + E G G RA GI DVR+ P++ Y+ + V G D Sbjct: 359 FQDRVVGAGVLSERIVRELGCLGYVARACGIGRDVRERAPHAPYDRLGVK-AVTRGDGDV 417 Query: 460 YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVS 519 R+ ++ EEL SL IL+QCL + GP +AD Sbjct: 418 AARLYVRYEELLASLDILDQCLRRIEPGPLRAD--------------------------- 450 Query: 520 WGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSD 579 W E ++E +G + Y+ DG+ R R PS + + I G++V D Sbjct: 451 WRTPPANAEGLGLVEGWRGEIATYVRFDGAGSIVRFFPRDPSVFNWPALEKLILGNIVPD 510 Query: 580 LIVYLGSIDFVMSDVD 595 + S++ S D Sbjct: 511 FPLCNKSVNGSYSGHD 526 >UniRef50_Q8U0Z6 Mbh12 membrane bound hydrogenase alpha (NADH dehydrogenase) n=3 Tax=Pyrococcus RepID=Q8U0Z6_PYRFU Length = 427 Score = 374 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 113/399 (28%), Positives = 189/399 (47%), Gaps = 26/399 (6%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + E ++ + GP HP + ++ LDGE IV+ +GY+ RG + +G R+++ Sbjct: 1 MKKVEYWVKIPFGPIHPGLEEPEKFIITLDGERIVNVDVKLGYNLRGVQWIGMRRNYVQI 60 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 + +R+ + + YV AVE++AGI VP+R IRV++ EL RI+SHLL + Sbjct: 61 MYLAERMCGICSFSHNHTYVRAVEEMAGIEVPERAEYIRVIVGELERIHSHLLNLGVVGH 120 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 D+G T + + R+++ D++EA++G R++ + IGGV D+ RL+ + + + Sbjct: 121 DIGYDTVLHLTWLARERVMDVLEAVSGNRVNYSMVTIGGVRRDIGEKQKRLILDMIKYYR 180 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 + L E L ++ ++ R + VA K A+E G G R +GI D R + Y Sbjct: 181 EVLPQIEDVFLHDSTIEARLRDVAVVPKKLAIEMGAVGPTARGSGIKEDSRWSEQLGVYP 240 Query: 445 NFDFEIPVGGG------VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 + + D Y R+ +++ EL SL +LE L+ MPEG K Sbjct: 241 DLGIKPVTPEDVTGEKARGDVYDRMAVRIGELWMSLDLLEHALDQMPEGKIKTFPKDNIL 300 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS-DGSTMSYRTRV 557 K + L E EA +G +Y+ G R + Sbjct: 301 VAKLKLLG-------------------DGEGIGRYEAPRGELVHYVRGQKGRDGPVRWKP 341 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R P+F +L I A+ G+ ++DL+V + SID +S DR Sbjct: 342 REPTFPNLFTIAKALEGNELADLVVAIASIDPCLSCTDR 380 >UniRef50_C7NUN7 NADH dehydrogenase (Quinone) n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN7_HALUD Length = 419 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 110/392 (28%), Positives = 189/392 (48%), Gaps = 22/392 (5%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 +E+ + +GP HPS L +DGE I + Y+HRG E+ +S+ Sbjct: 1 MSEDVSGTEIPVGPQHPSLKEPANFTLTVDGEVITGADLKLSYNHRGIEQAVLSKSYLEN 60 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 I +RI + + + + VE L + VP R N IR ++ EL RI+SH+L++ Sbjct: 61 IYLLERICGICSHAHTTSFAIGVEDLLDLDVPRRANYIRTLIGELERIHSHMLWLGVAGH 120 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 ++G T +A+ DR+ + DL+E ITG R+H + IGGV DL + E +D + Sbjct: 121 EIGFDTLWQYAWRDREIVLDLLEEITGNRIHYSINTIGGVRQDLTAEQRETVLEKMDELE 180 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 +R+ Y + ++ R + V A+ A E+ G RA+G+ DVR+ PY+ Y+ Sbjct: 181 ERIDFYLETVPNEETVRMRCENVGTVSAELAREYCAAGPVGRASGLPVDVRRDAPYAAYD 240 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 DF++ + D R +++ E+ +S+ I+ Q ++P+G KA +P P + Sbjct: 241 EMDFDV-ITDTAGDLLARTTVRIREIAESISIIRQAAADIPDGDLKA-----SPKPVQAL 294 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 L I P ++ EA +G +Y+ +DG+ R +R P+ A+ Sbjct: 295 LAQI----------------PEDDVVSRYEAPRGELIHYIRADGTDTPERVHIRVPTLAN 338 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + A+RGS ++D + + ID +S R Sbjct: 339 WPTVVEALRGSYIADTPIVVAGIDPCISCTSR 370 >UniRef50_P31895 Carbon monoxide-induced hydrogenase n=14 Tax=Bacteria RepID=COOH_RHORU Length = 361 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 29/389 (7%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 + +GP H + +++DGE++V G+ HRG E + +++ + I T Sbjct: 1 MSTYTIPVGPLHVALEEPMYFRIEVDGEKVVSVDITAGHVHRGIEYLATKRNIYQNIVLT 60 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +R+ L + Y +A+E + G+ VP R +RV+ E R+ SH+ ++ VG Sbjct: 61 ERVCSLCSNSHPQTYCMALESITGMVVPPRAQYLRVIADETKRVASHMFNVAILAHIVGF 120 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL- 387 + R+ + D EA+ G RM A IGGV +DL + LD + L Sbjct: 121 DSLFMHVMEAREIMQDTKEAVFGNRMDIAAMAIGGVKYDLDKDGRDYFIGQLDKLEPTLR 180 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 N + R++G+ A + +++G G R +G +DVRK PY+ Y+ D Sbjct: 181 DEIIPLYQTNPSIVDRTRGIGVLSAADCVDYGLMGPVARGSGHAYDVRKQAPYAVYDRLD 240 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 FE+ +G D ++R M++ +E S+ ++ QCL +MP+GP KA Sbjct: 241 FEMALGEH-GDVWSRAMVRWQEALTSIGLIRQCLRDMPDGPTKA---------------- 283 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 P +PA E+ EA +G YYL ++G+ R + R P++ + Sbjct: 284 -----------GPVPPIPAGEAVAKTEAPRGELIYYLKTNGTDRPERLKWRVPTYMNWDA 332 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G+ +SD+ + + SID +S +R Sbjct: 333 LNVMMAGARISDIPLIVNSIDPCISCTER 361 >UniRef50_C2BU22 NADH dehydrogenase (Quinone) n=4 Tax=cellular organisms RepID=C2BU22_9ACTO Length = 457 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 149/430 (34%), Positives = 221/430 (51%), Gaps = 22/430 (5%) Query: 188 LEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGY 247 E + + + D + +NLGP HPS HG R++++L+GE + DC GY Sbjct: 29 PEFSVHDGEWSAMSADLESAHNDRIAVNLGPVHPSTHGVLRVIVELEGETVKDCRLGTGY 88 Query: 248 HHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVM 305 H G EK E ++++ + Y R++Y+ +E+ + LAVEK G+T VP R + IRV+ Sbjct: 89 LHTGIEKSMEYRTYNQGVAYCSRMDYVAPFFSEVAWCLAVEKALGVTDQVPRRASEIRVL 148 Query: 306 LSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA 365 L EL RI SHL+ + T ++GA T + F R++I + E ITG RM+ + R GGV+ Sbjct: 149 LMELNRIASHLVAVGTGANELGATTMLTTGFRGREEILRIFEHITGLRMNNTYMRPGGVS 208 Query: 366 HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGL 425 +DL ++RE L + + + + + N I GR + V + TG L Sbjct: 209 NDLLDDTIDMIREKLPLVKRDIGEMQDLIMANPIFIGRMKNVGWLPLSTMMALSLTGPCL 268 Query: 426 RATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP 485 RA G+ D+RK +PY GYE + F++P SDCYTR ++ EE+ QSLRI+ Q L+ + Sbjct: 269 RAGGLPLDMRKLQPYCGYEAYTFDVPT-RDHSDCYTRTEVRFEEMYQSLRIVYQVLDRLE 327 Query: 486 EG---PFKADHPLTTPPPKERTLQH----------------IETLITHFLQVSWGPVMPA 526 + P P P K +E LI HF V+ G +P Sbjct: 328 QSEGEPVMIADPKFAYPSKLTIGADGQGQDPEHVSHILGHSMEELIHHFKLVTEGFRIPP 387 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 + + +E KGI +L +DG T YR R PS+A+LQ G L+SDL+V +GS Sbjct: 388 GQVYAQVEHAKGIQGVHLVTDGGTHPYRAHFRDPSYANLQSASMMCEGGLISDLVVSIGS 447 Query: 587 IDFVMSDVDR 596 ID V VDR Sbjct: 448 IDPVFGGVDR 457 >UniRef50_B6YU98 Membrane bound hydrogenase, NiFe-hydrogenase large subunit 2 n=5 Tax=Euryarchaeota RepID=B6YU98_THEON Length = 426 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 106/395 (26%), Positives = 182/395 (46%), Gaps = 26/395 (6%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E ++ + GP HP + +L LDGE IV+ +GY+ RG + + R+++ + Sbjct: 6 EYWIKIPFGPIHPGLEEPEKFILTLDGERIVNVDVKLGYNLRGLQWIAYRRNYVQIMYLA 65 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +RI + + Y AVE+ AGI VP+R IR ++ EL R++SHLL + D+G Sbjct: 66 ERICGICSFSHNHTYTRAVEEAAGIEVPERAEYIRAIIGELERVHSHLLNLGVLGHDIGY 125 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T + + R+++ D++EAI+G R++ + IGGV D+ RL+ + + + + Sbjct: 126 DTVLHLTWLARERVMDVLEAISGNRVNYSMVTIGGVRRDIDEKGKRLILDMIKYYRSIMP 185 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 E+ L + ++ R + A + ALE G G RA+G+ D R + Y + Sbjct: 186 QIEEVFLHDPTIEARLRDCAVISKRVALEQGAVGPTARASGLKVDARWSERLGVYPDLGV 245 Query: 449 EIPVGGG------VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE 502 + + D + R +++ E+ QSL +LE L+ MPEG K K Sbjct: 246 KPVMPQDVTGEKPHGDVFDRAAVRIGEIYQSLDMLEHALDQMPEGKIKTFPKDNILVAKL 305 Query: 503 RTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS-DGSTMSYRTRVRTPS 561 + + E EA +G +Y+ GS R + R P+ Sbjct: 306 KIMV-------------------DGEGIGRYEAPRGELVHYVRGKKGSDKPLRWKPREPT 346 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 F +L + + G V+D ++ + SID +S DR Sbjct: 347 FPNLFAVAKGVTGDQVADFVLAVASIDPCLSCTDR 381 >UniRef50_A7I7D0 NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=6 Tax=cellular organisms RepID=A7I7D0_METB6 Length = 526 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 112/511 (21%), Positives = 187/511 (36%), Gaps = 48/511 (9%) Query: 85 EGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGIT 144 + + Y ++L AL + +FP+A W ERE D++GI Sbjct: 63 PVYAGEGYILRYVFSH--AGSILVLSRALNRKQAT--SIATIFPSATWPERECRDMYGIK 118 Query: 145 FDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKR 204 F+G + RR+++ +T + + K E F+ Sbjct: 119 FEGAFDTRRLVLHETCP-----AGFYPLEKSVKNAPVATKKTVPPAEEYPFRTVSGD--- 170 Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + +GP H + GE + + + Y HRG EK+ E + + Sbjct: 171 -----GVYQVPVGPVHAGIIEPGHFRFSVIGETVFNLEIRLFYTHRGIEKLAEGKDPAAC 225 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 + + + N +A+E+L+GITVPDR IR +L E RI SHL +S + Sbjct: 226 VRVAEAVSGDESAANATGLCMAIERLSGITVPDRAWHIRTVLCESERICSHLGDLSGMLT 285 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 DV R++ + E ++G R GG++ D+P REFL Sbjct: 286 DVAFALGASHFAVLREEFFREQEKLSGSRFLRGMILPGGISRDIPVETLARYREFLARFA 345 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 K + L + R TG RA+G DVR PY Y+ Sbjct: 346 KEFRAGLAIVLSTPSVIDRFTQTGIIRKPLLGPLNITGPVARASGSGRDVRVDSPYGMYD 405 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 F +P D R +K E+ SL ++E+ + MPEGP + Sbjct: 406 RF-IPVPHPLNDGDVLARFTVKAAEVLDSLSLIEKVIAGMPEGPVISAD----------- 453 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH 564 + + ++E +G N ++ +R +VRT S+ + Sbjct: 454 ------------------GVGDGAALALVEGPRGENLCWVEIRE-GRVFRYKVRTASYCN 494 Query: 565 LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 I A G++++D V S++ + D Sbjct: 495 WLAIEHAAPGNIIADFPVINKSLNLSYAGTD 525 >UniRef50_C0QBF7 HyfG n=3 Tax=Bacteria RepID=C0QBF7_DESAH Length = 503 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 105/559 (18%), Positives = 177/559 (31%), Gaps = 84/559 (15%) Query: 62 KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIM------------- 108 PK + L D +D + ADF L + N I Sbjct: 3 NSPKKSLTLSDWTAIDYNDC---PVVSMADFRTT-ILDDVRNNYRICSFFGTPNPEEKIR 58 Query: 109 ------------LKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 ++V A+ D + T P +ERE ++ + + GHP L+ + Sbjct: 59 LICVLANDDAGSVEVVAADTDPAFQSLTPDCPQVQAFEREIYEQWNVLPQGHPWLKSVRS 118 Query: 157 PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNL 216 + + E+ + + Sbjct: 119 H----------------------------PPVVAAHGKAAHAGTTDFFSIDGEEAHEVAV 150 Query: 217 GPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGG 276 GP H Q GE + +GY HRG E + + Y + + Sbjct: 151 GPVHAGIIEPGHFRFQCHGETVYHLEISLGYQHRGVEPALKDGPDKRTLHYFETLAGDTS 210 Query: 277 CVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAF 336 + +E LAGI VP R IR + +EL RI +H+ + DVG + + + Sbjct: 211 IGHGTAGCCMIEALAGIDVPPRGQAIRAIAAELERIANHIGDLGAISGDVGFLPTMSYCG 270 Query: 337 TDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQ 396 R +L I G R GG A D+ L LD + S + L Sbjct: 271 RIRGDALNLTAMICGNRFGRGLVIPGGTAWDITHAQTGELLRRLDEIHADAHSAIELMLN 330 Query: 397 NTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGV 456 + R + + A E G G RA+G+ DVR + PY Y + Sbjct: 331 TPSVLARLENTGQVPTQTAREIGLVGLAARASGLKQDVRTSHPYENY-RLTPLPVITRKT 389 Query: 457 SDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFL 516 DC R ++ E++ S + + L ++P G Sbjct: 390 GDCLARAQIRWGEIQASFKFIRTLLADLPGGEVAN------------------------- 424 Query: 517 QVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSL 576 + G + P + ++E +G + +D + ++ PSF + + A+R Sbjct: 425 -LWEGKLPPQKMATILVEGWRGEICHTAATDSAGKFSFYKIVDPSFHNWFGVSLALRNQQ 483 Query: 577 VSDLIVYLGSIDFVMSDVD 595 +SD + S + D Sbjct: 484 ISDFPLCNKSFNLSYCGHD 502 >UniRef50_A1RZ50 NADH dehydrogenase (Ubiquinone) n=6 Tax=Archaea RepID=A1RZ50_THEPD Length = 404 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 130/389 (33%), Positives = 194/389 (49%), Gaps = 3/389 (0%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 +E L +GP HPS+ G R +++L G+ IV PDIGY HR EK+ E + IP Sbjct: 19 DESVYELFIGPQHPSS-GHMRFIVRLQGDVIVSVDPDIGYVHRTMEKLAEGREAIKAIPL 77 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R+ + + V A+E+L + P R +R +LSE+ RI SHL + + Sbjct: 78 LERLTIIDSHNATVGLVTAMERLLDVEPPPRALYLRTLLSEINRIASHLYGMGIAGIMLN 137 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 T +AF DR+ L E +TG R+ + GGV DLP+G+ + +M +RL Sbjct: 138 HSTMFMWAFGDREVWLQLAEELTGARLTHTYSVPGGVRRDLPQGFGEKFEKAARYMERRL 197 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y + L+N + R +GV EA G G LRA+G+ +D R A Y Y++ + Sbjct: 198 QDYMRIFLENPQVVARYEGVGVLKKSEASRLGVVGPNLRASGVKYDARLADDYGAYKDLE 257 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 FE+P DC R++++VEE++QS+ I+ Q L MP+GP ++ L PPK R Sbjct: 258 FEVPT-REEGDCMARMLVRVEEIKQSISIIRQVLRKMPDGPILSEKYLKLLPPKTRERVL 316 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 E + F + +PA E+ E G Y++T DGS YR RV TPSF ++ Sbjct: 317 QEGRV-KFPALFASLKLPAGEAVARAEMGHGEIFYHITGDGSAKPYRLRVVTPSFRNVIL 375 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G D GS+D+ + DR Sbjct: 376 FRYLAPGHRFMDFPAIYGSLDYFPPEADR 404 >UniRef50_B5IS38 Respiratory-chain NADH dehydrogenase, 49 Kd subunit domain protein n=1 Tax=Thermococcus barophilus MP RepID=B5IS38_9EURY Length = 409 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 106/390 (27%), Positives = 188/390 (48%), Gaps = 25/390 (6%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 ++ +GP HP+ R+ +++GE+IV G+ HRG E MG +++ + ++RI Sbjct: 6 YYIPIGPIHPALKEPIRVEAEVEGEKIVRVDVKRGFAHRGIEYMGMKRNAIQTLYLSERI 65 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + +V+ EK GI P R IR +++EL RI+SH+L++ ++G + Sbjct: 66 CGICSISHPYAFVVTAEKALGIEAPPRAQYIRPIIAELERIHSHILWLGVIAHEMGFDSL 125 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +F+ + R+K+ DL+E +TG R++ + + IGGV DL + +++ + + K + Sbjct: 126 LFWTWKGREKVLDLLELLTGNRINYSVYMIGGVRRDLKESHIKAIKDAITYYWKFTEQMK 185 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + L + + K R++GVA + AL+ G RA GI D+R+ PY Y + D Sbjct: 186 EIILSDPVYKARTRGVAQLSKEMALKLNVVGPVARAAGIRMDIRQDMPYDAYADIDVRAV 245 Query: 452 VGGG-----VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 V D Y M+++ E+ QSL I+E C++N+PEG A Sbjct: 246 VPQDIVGEAKGDAYDITMVRIYEIEQSLDIIEYCVDNLPEGKILA--------------- 290 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 I ++ + E+ EA +G +YL DG +V PS+ ++ Sbjct: 291 -----IPNYPALLAKIRRTKGEAIGAHEAPRGEVVHYLKFDGRDGPSVWKVIAPSYNNIN 345 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G+ V+D+ + + ID M DR Sbjct: 346 SWAPLLLGAEVADIPIVVAYIDPCMCCNDR 375 >UniRef50_A0B812 F420H2 dehydrogenase subunit C n=6 Tax=Archaea RepID=A0B812_METTP Length = 390 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 134/409 (32%), Positives = 208/409 (50%), Gaps = 28/409 (6%) Query: 190 MEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHH 249 E + + +++ M +++GP H G F + L ++GE + D+GY H Sbjct: 8 PERPKYPTFREREEAEIKSDSEMIMHMGPQHAIVPGPFLLDLLIEGERVKKAFLDVGYIH 67 Query: 250 RGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSEL 309 +G EK+ E +++ I YTDR+ YL N Y AVEKL GIT P+R IRV+L+EL Sbjct: 68 KGIEKIMENRTYLQGIVYTDRMCYLASITNNEAYCGAVEKLLGITPPERAQYIRVILAEL 127 Query: 310 FRINSHLLYISTFIQDVGAMT--PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHD 367 RI SHLL F+ +GA T P + DR+ I L+E+ITG R+ + R GGV +D Sbjct: 128 SRIQSHLLGTGEFLTLLGAATYSPFQYMIIDREDIVYLMESITGARITHTFVRFGGVRND 187 Query: 368 LPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRA 427 LP G+ R L M +R Y + I R +G+ +A G +G LRA Sbjct: 188 LPDGFADKARPILKRMRERTEEYMDLLHSDPIYTRRMRGIGVLSPGDARRLGVSGPPLRA 247 Query: 428 TGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEG 487 + +D+R+ P Y + DF++ V D RV +++EE+ +S+ I+EQCL+ +P+G Sbjct: 248 SDTPYDMRREDPILVYPDLDFKV-VTRKAGDAEARVEVRLEEILESIHIIEQCLDQIPDG 306 Query: 488 PFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD 547 P + P P E++ +E +G +Y+ SD Sbjct: 307 PIQEKLPKKIKPE-------------------------PGEAYYRVEDPRGEMGFYVVSD 341 Query: 548 GSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 GS YR +VR P +A++Q +P + G+ V+D++ GS+D S+VDR Sbjct: 342 GSEKPYRVKVRGPVYAYMQALPPLLEGAYVADVVAIAGSMDACTSEVDR 390 >UniRef50_B1ZUJ2 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=Bacteria RepID=NUOD2_OPITP Length = 399 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 139/391 (35%), Positives = 210/391 (53%), Gaps = 25/391 (6%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 + +NLGP HP+AHG R+++++DGE + + P IGY HR EKMGE ++W ++ Sbjct: 34 HAPHETFTINLGPQHPAAHGVLRVLMRMDGEWVENAEPVIGYIHRMHEKMGENRTWAKFL 93 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 P T RI+YL +V VE+ I VP+R IRV+ SEL RI SH ++ + D Sbjct: 94 PNTSRIDYLSAMHYTHAWVGVVERGLKIEVPERAEYIRVITSELNRIASHQVWWGALLLD 153 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 +G TP+ +AF DR+KI DL+E + G R+ ++R GG+ +D + + REF+ +M Sbjct: 154 LGGFTPILYAFDDREKILDLLEGLCGARLTYCYYRFGGLYNDADDDFLKGTREFVKYMRP 213 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 RL Y N IL+ R G+ A ++G TG +R +G+ +DVR+A PYS Y Sbjct: 214 RLKMYRDLVTDNVILRQRLTGIGPISADTCRKYGATGPVIRGSGVAYDVRRAEPYSVYPK 273 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 F+IP D R +++++E+ +SL I+EQCL+ + GPF A Sbjct: 274 LQFKIPTY-PECDSMARYLVRMDEMEESLNIIEQCLDLIQPGPFMA-------------- 318 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 +V +PA + +EA +G + SDG YR R+RTPSF +L Sbjct: 319 ----------PKVPRVIRLPAGDYTYAVEAARGRFMVRVVSDGKENPYRARLRTPSFGNL 368 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 RG L+ D + +GS+D V+ D+DR Sbjct: 369 SLFEETSRGMLLPDALAMMGSLDLVIPDIDR 399 >UniRef50_Q2FTW4 Membrane bound hydrogenase subunit mbhL n=3 Tax=Euryarchaeota RepID=Q2FTW4_METHJ Length = 409 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 105/391 (26%), Positives = 183/391 (46%), Gaps = 26/391 (6%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L +GP HP+ Q++GE I G HRG E MG R++ + DRI Sbjct: 8 YELPIGPIHPALKEPINFTFQMNGEVIEKVDFAPGRAHRGIEWMGMRRNPVQILHLCDRI 67 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + G + + + AVE++A I VPDR +R +++E RI SH+L+ ++G T Sbjct: 68 CGICGVHHALVFAQAVEQIADIEVPDRAYYVRTIIAEFERIQSHILWAGVAAHELGFDTL 127 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + A+ R++ D++E ITG R++ +GG D+ L + L + L Sbjct: 128 FYLAWQIREESVDVIEYITGNRVNYGIMMLGGTRRDITADMFPRLEQALQYYEGLLEKMV 187 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 L + + R + + ALE T G RA+G+ DVR PY+ Y + DF+I Sbjct: 188 NLFLNDKTIAMRCKDTGILTKRRALELATVGPTSRASGLAMDVRIDSPYAAYGDLDFDIV 247 Query: 452 VG-----GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 + G D Y R+++++ E++QS+ I+ QC+ MPEGP A+ Sbjct: 248 LPDVYNSEGNGDVYDRIIVRIFEIKQSIDIIRQCMKQMPEGPVLAEEK------------ 295 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM-SYRTRVRTPSFAHL 565 + ++ + E+F +EA +G + +Y+ +G +V+ ++++ Sbjct: 296 --------YAKLLMNLKKASGEAFARVEAPRGEDMHYVRMNGKQEAPEMWKVKASTYSNQ 347 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++G ++D+ + + SID MS DR Sbjct: 348 MAWVEILQGEQIADIPIIVASIDPCMSCTDR 378 >UniRef50_C6A3Z3 Membrane-bound hydrogenase MBH 2, subunit Mbh2L (NiFe hydrogenase catalytic subunit) n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A3Z3_THESM Length = 412 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 107/391 (27%), Positives = 190/391 (48%), Gaps = 26/391 (6%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 ++ +GP HP+ R+ +++GE+IV G+ HRG E MG +++ + ++RI Sbjct: 6 YYVPIGPIHPALKEPIRVEAEVEGEKIVKVDVKRGFAHRGIEYMGMKRNAIQTLYLSERI 65 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + +V+ EK GI P R IR +++EL RI+SH+L++ ++G + Sbjct: 66 CGICSISHPYAFVIGSEKALGIEAPPRAQYIRTIIAELERIHSHILWLGVIAHEIGFDSL 125 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +F+ + R+K+ D++EAITG R++ + + IGGV DL R+L++ + + + + Sbjct: 126 LFWTWKGREKVLDILEAITGNRINYSMYMIGGVRRDLKESHIRVLKDMITYYWEFTEHMK 185 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + L + + K R++GVA AL+ G RA G+ D+R+ PY Y + D + Sbjct: 186 EVFLSDPVYKARTRGVAQVSKDVALKLNLVGPTARAAGLRMDIRQDIPYDAYADIDVKAV 245 Query: 452 VGGG-----VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 V D Y M+++ E+ QSL I+E C++N+PEG A Sbjct: 246 VPQDIVGEARGDAYDVTMVRIYEIEQSLDIIEYCIDNLPEGKILA--------------- 290 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS-TMSYRTRVRTPSFAHL 565 I +++ + E EA +G +Y DG+ +V PS+ ++ Sbjct: 291 -----IPNYIALLNKIKKTEGEGIGAHEAPRGEVVHYFRYDGTRDGPAVWKVIAPSYNNI 345 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G+ V+D+ V + ID M DR Sbjct: 346 NSWGYCLLGAEVADIPVVVAYIDPCMCCNDR 376 >UniRef50_B2HHH7 Formate hydrogenase HycE n=3 Tax=Actinomycetales RepID=B2HHH7_MYCMM Length = 498 Score = 365 bits (936), Expect = 4e-99, Method: Composition-based stats. Identities = 109/537 (20%), Positives = 194/537 (36%), Gaps = 55/537 (10%) Query: 63 LPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPT 122 + + +L RL V Y L++ +R + L + + VP+ Sbjct: 12 DAELAESVAELLAEGYRLALVAAHDDGDALRVVYLLVAGQPDRRVELTLRTGAANPSVPS 71 Query: 123 FTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELT 182 +L A +ERE DL+GI+ GHP RR++ W + Sbjct: 72 LAELSIPAGRFEREMMDLYGISPVGHPQPRRLVRHAHWP------------------QDW 113 Query: 183 KAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCV 242 + + F E + +GP H + GE I+ Sbjct: 114 HPMRRDAGDPPPFDAVGRFPFVTVEGPGVYEIPVGPVHAGLIEPGHFRFSVIGESILRLK 173 Query: 243 PDIGYHHRGAEKMGERQSW---HSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRV 299 + + HRG EK+ E ++ + +RI + + + LAVE G+ VP+ V Sbjct: 174 ARLWFVHRGVEKLFEGRNALGAREAVELAERISGDSSAAHSLAHCLAVEDALGLDVPEPV 233 Query: 300 NVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWF 359 + +R +L EL R+ +H+ + DVG A R+++ + +TG R+ A Sbjct: 234 HRLRALLVELERLYNHVTDLGALANDVGFALANAHAQGIRERVLRINRRVTGHRLLRAAM 293 Query: 360 RIGGVA-HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEW 418 GGV +LP L + +A + L+N+++ R A +++A Sbjct: 294 APGGVVLQELPDP------AELHAVAAEVAEISELTLRNSVVYDRFAETAVLHSEDARAL 347 Query: 419 GTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILE 478 G G RA+GI D R P + V G D R ++ +E S+ + Sbjct: 348 GCLGYVARASGIATDARLDHPTAELPV----TAVAAGGGDVLARYTIRRDEFAASVALAC 403 Query: 479 QCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG 538 + N PPP + T ++E +G Sbjct: 404 HLVEN------HHGRTRFAPPPAANGARSAVTS-----------------GVGIVEGWRG 440 Query: 539 INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + + DG+ R ++ PS+ + +P A+ ++V D + S + + D Sbjct: 441 AVLHRVEVDGAGRITRCKIVDPSWFNWPALPVAMADTIVPDFPLANKSFNLSYAGND 497 >UniRef50_B3DZF5 Formate hydrogenlyase subunit 5 n=8 Tax=Bacteria RepID=B3DZF5_METI4 Length = 535 Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats. Identities = 110/502 (21%), Positives = 182/502 (36%), Gaps = 55/502 (10%) Query: 95 FYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRI 154 Y + I L L + P+ +P+A ER +DLFG+ G + R Sbjct: 87 VYLALLDRGGSKISL-FGLQVPEGKFPSVAVAYPSAARLERALYDLFGLQAQGSLDSRPW 145 Query: 155 MMPQTW-KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMF 213 + W P+ YP E+ E Sbjct: 146 LDHGKWGVRFPMGDSYPDGE------------------------EKLYSFFPARGESLHQ 181 Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + +GP H + GE +V +GY H+G E + S + RI Sbjct: 182 VPVGPVHAGIIEPGHFRFTMSGEIVVRMEERLGYTHKGIESLFSGASIDKGMEIAGRISG 241 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 Y LAVE+ GI+ P R IR +++EL R+ +H + D + Sbjct: 242 DSTVAYAYGYALAVEEALGISPPPRAEWIRALMAELERMANHFGDVGAICNDAAFPRILS 301 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 R+KI ++ G R+ +GGV DL +RE L+ + + + + Sbjct: 302 RCALLREKILRCAQSCFGHRLMRDKIVVGGVKEDLNAEGLSRIRELLETIKEEVVCLKDF 361 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 L+ R+ G + A +G G RA+G +FD RKA Y Y++ FE+PV Sbjct: 362 YDSKNSLQDRTVGTGVLDRRLAELFGAGGFIGRASGRNFDSRKAFAYKPYDSLSFEVPVL 421 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D RV +++ E+ QS+++LEQ L MP G A+ Sbjct: 422 ED-GDVNARVWIRILEIEQSVKLLEQILEGMPPGSICAERIGGE---------------- 464 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 + + ++E+ +G ++ + R R PS+ + I Sbjct: 465 -----------GSGKGLSVVESFRGDILTWIEI-YNGKIIRCHPRDPSWFQWPLLEKVIV 512 Query: 574 GSLVSDLIVYLGSIDFVMSDVD 595 G +++D + S + S D Sbjct: 513 GGVIADFPLCNKSFNCSYSGHD 534 >UniRef50_A9G9T3 NADH-quinone oxidoreductase subunit D 2 n=5 Tax=Myxococcales RepID=NUOD2_SORC5 Length = 388 Score = 364 bits (934), Expect = 7e-99, Method: Composition-based stats. Identities = 149/411 (36%), Positives = 219/411 (53%), Gaps = 27/411 (6%) Query: 190 MEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHH 249 M + F + G + G E +D M LN+GP+HPS HG R V+ DGE I VPD+GY H Sbjct: 1 MSQVIFSVDRGGAEPGAEMDDEMTLNMGPHHPSTHGVLRFVISTDGEIIRKAVPDVGYLH 60 Query: 250 RGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSEL 309 R EK+GER ++ ++PYTDR++Y+ + A EKL GI VP R +RV+ EL Sbjct: 61 RSIEKIGERCTYSGFMPYTDRVDYIAAMFANEAWASACEKLMGIEVPKRAQYLRVISCEL 120 Query: 310 FRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP 369 RI SH++ + DVGA+TP +A +R+ I D +E + G R+ + RIGGV+ D+P Sbjct: 121 NRIGSHMIALGAMAMDVGAVTPFPWALREREYINDFIEELCGARLTFNYHRIGGVSFDMP 180 Query: 370 RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATG 429 +GW ++ +LD + +++ N I R VA A+EA +WG G LR +G Sbjct: 181 KGWADKVKHWLDRFEPIMVEFDRLISLNDIFIKRLANVAVVTAEEAKDWGLVGPNLRGSG 240 Query: 430 IDFDVRKARPYSGYENFDFEIPVGGGV----SDCYTRVMLKVEELRQSLRILEQCLNNMP 485 + +D+RK YS Y +F++PVG G DC+ R ++VEE R+S +IL Q L+ + Sbjct: 241 VKWDLRKEDAYSVYPELEFDVPVGRGRYGTVGDCWDRFYVRVEECRESAKILRQALDKID 300 Query: 486 EGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT 545 E P D L P K R P E++ IE+ +G Y+ Sbjct: 301 EHP--EDDILGKLPKKMR---------------------PDGEAYARIESARGDMGCYVI 337 Query: 546 SDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 G+ +YR R RT SF + I A G ++DL+ + S D V ++DR Sbjct: 338 GRGAEEAYRARFRTGSFTAMAMIEAKSPGLFLADLVALIASFDVVAPEIDR 388 >UniRef50_C6A407 Membrane-bound hydrogenase MBH 1, subunit Mbh1L (NiFe hydrogenase catalytic subunit) n=4 Tax=Thermococcus RepID=C6A407_THESM Length = 430 Score = 363 bits (933), Expect = 9e-99, Method: Composition-based stats. Identities = 102/399 (25%), Positives = 182/399 (45%), Gaps = 27/399 (6%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + E ++ + +GP HP+ + ++ LDGE I+ +GY+ RG E + R+++ Sbjct: 2 NSRIEYWVKIPIGPIHPALEEPEKFIITLDGERIIHVDIKLGYNLRGLEWIAMRRNYIQL 61 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 + +RI + + Y AVE++AGI VP+R IR ++ EL RI+SHLL + Sbjct: 62 LYLVERICGICSFSHNHTYTRAVEEMAGIEVPERAEYIRAIIGELERIHSHLLNLGVVGH 121 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 +G T + ++ R+++ D++EAI G R++ A IGGV D+ R++ + + Sbjct: 122 AIGYDTVLHLSWLARERVMDILEAIGGNRVNYAMNTIGGVRRDIEEKHKRMILDMIKHYR 181 Query: 385 KRL-ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 + + E+ L + ++ R + + ALE+ G R +GI DVR Y Sbjct: 182 EEVMPKVEEIFLYDPTVEARLRDAGVIPKRIALEYSAQGPTARGSGIKKDVRYNERLGVY 241 Query: 444 ENFDFEIPVGGG-----VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 + D + R++++V EL QS+ I+E+ + MPEG K Sbjct: 242 PELGIKPITPKEFTGVIKGDVFDRMVVRVGELWQSMEIIEKAFDQMPEGKIKTFSKDNVT 301 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD-GSTMSYRTRV 557 K EA +G +Y+ ++ G+ + + Sbjct: 302 LTK--------------------LKKAEGAGIGRYEAPRGETIHYVRANPGTDTPAKWKA 341 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R P+F +L + A+ G ++D+ V + SID +S DR Sbjct: 342 REPTFPNLFAVARALVGEQLADVPVAIASIDPCLSCTDR 380 >UniRef50_Q3ZW31 Hydrogenase, group 4, HycE subunit n=3 Tax=Dehalococcoides RepID=Q3ZW31_DEHSC Length = 526 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 109/579 (18%), Positives = 204/579 (35%), Gaps = 59/579 (10%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE 78 + L P ++ + ++ + + K + L L G++ Sbjct: 4 PELHNYLAEFLSPAINPLKLEKGANKDYYLWLDWTEAAALYPKLAEDGFG-LIGLFGVEG 62 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 S+ Y + + + V + D V + +FP+A ++ERE Sbjct: 63 FRGY-------QGLSLLYIFEKRNYSGTL---VIIRRADSPVSSIAAIFPSACYFEREIR 112 Query: 139 DLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 D +G F+ + RR+ + +T+ HPL + + + Sbjct: 113 DGYGCEFENAFDRRRLFLHETYPANFHPLANSFKNQPLSL---------------PAGVE 157 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 E + E + +GP H GE I++ + Y HRG EK+ Sbjct: 158 NEALYPFKKISGEGVYEVGVGPVHAGIIEPGHFRFSAIGEPILNLEVRLFYTHRGLEKLA 217 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 + + + I N Y AVE + P R +R++L E+ R+ SHL Sbjct: 218 MGKDIDFGLKIAEGISGDESAANTYAYSSAVEHICSSRPPRRAEQLRLILLEMERLYSHL 277 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 +S + DVG R+++ + +TG R GG+ D+P L Sbjct: 278 ADLSGMLTDVGYPVGAASLSALREELMRWNKRLTGSRFLKGIIAPGGLLKDIPGELITEL 337 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 ++L R + + AL T + R + + + TG RA+G D R Sbjct: 338 ADYLYAFEGRFSEQVEKALAKTSVVDRFETTGIVNNRLLIPLNITGVTARASGEAIDTRL 397 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 +PY Y F++PV D R +++ E++ SL ++ + + G + Sbjct: 398 NQPYGFYPELSFKLPVL-PEGDVMARFRVRLSEVQTSLGLILKTAAKLSAGEYAIPL--- 453 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 S ++E+ +G + ++L R + Sbjct: 454 --------------------------KPVNGYSLVLVESPRGQSLHWLWLR-DGKIERYK 486 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 VRT S+ + Q I A+ G ++ D + S++ + D Sbjct: 487 VRTASYCNWQAIEHAVLGDIIPDFPLINKSLNLSYAGTD 525 >UniRef50_A8MBT0 NADH dehydrogenase (Quinone) n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MBT0_CALMQ Length = 424 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 130/414 (31%), Positives = 204/414 (49%), Gaps = 4/414 (0%) Query: 184 AKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVP 243 + F P M D + +GP HP + G RI+L+L G+ IV+ VP Sbjct: 14 PVEVPAEVKSLFLPIPKNMVEEAYKSDEYLVLIGPAHPGS-GHMRIILRLKGDYIVEAVP 72 Query: 244 DIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIR 303 D GY HR EK+ E + + IP +R + + YV A+E+L + VP R +R Sbjct: 73 DPGYVHRSVEKLAETRLFVHNIPLVERPTIAESSIMDHGYVRAIEELGQLDVPPRAQYLR 132 Query: 304 VMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGG 363 V++ EL RI HL +G T + F R+ I D + +TG R+ ++ G Sbjct: 133 VIMDELSRIGDHLYDTGILAVFLGHSTGYMWGFGLRELIVDALARMTGARITVSFVIPSG 192 Query: 364 VAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGA 423 V D+ R + ++ K++ +N + R + V + ++ G G Sbjct: 193 VRWDVHPDVLRYIYNMTFFIEKKIDELGTIFTKNPVTVSRMKDVGVLTKDQCIKLGAVGP 252 Query: 424 GLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNN 483 LRA G+++D R+ARPY+ Y+ ++EIPV D Y+R +++VEE+RQSL I+ Q + N Sbjct: 253 FLRACGVEYDNRRARPYAVYDQLEWEIPVADE-GDAYSRFLVRVEEIRQSLNIIRQAVKN 311 Query: 484 MPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYY 543 +PEGP + +T PPKER + F + G +P E+ + EA +G Y Sbjct: 312 IPEGPVIGNKLMTRVPPKEREKVAKDIRNYLFRLL-IGLTLPEGEATTLTEAARGTLLYS 370 Query: 544 LTSDG-STMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 L SDG S + YR R+ TPS+ +L+ ++RG + DL GS + + DR Sbjct: 371 LVSDGKSNVPYRLRMITPSWYNLKPFMESLRGYRLMDLPAIYGSWGYFPPEADR 424 >UniRef50_Q0F384 Hydrogenase subunit n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F384_9PROT Length = 532 Score = 361 bits (927), Expect = 4e-98, Method: Composition-based stats. Identities = 122/555 (21%), Positives = 198/555 (35%), Gaps = 56/555 (10%) Query: 43 VPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISID 102 +P + I+R ++L V L+ A Y + Sbjct: 31 MPCLEIRRLDWAHAACEARRLGMRLVALW--------GAEAGCHDRDAHAMYAYMAFAHP 82 Query: 103 RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG 162 +R +L+ LA + +P+ + + A ER D+FGI P+ R + + W Sbjct: 83 EHRHTLLRTPLAAENPELPSISGHYIAACRMERHMQDMFGIHITDIPDPRPWIKHEHWPR 142 Query: 163 --HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNH 220 +PLR D+ AR L + + +E + +GP H Sbjct: 143 EAYPLRVDFDAR------------------PPLLAEAHGDYDYVRSGSEGVYEIPVGPVH 184 Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 GE I++ +GY H+G E+ + +S + RI + Sbjct: 185 AGIIEPGHFRFLAVGEHILNMEERLGYVHKGIERAMQSKSAEEGLKVASRISGDSTVAHA 244 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQ 340 + A E I VP R + IR +L E RI +H+ I D + R+ Sbjct: 245 WAFAQACEYAGQIDVPRRASFIRAILCERERIANHIGDIGAVCNDAAFAFMLHQMHRLRE 304 Query: 341 KIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTIL 400 + L + G R+ GGV DL LLRE + + + + Sbjct: 305 DMARLHLELFGHRLLMNTLIPGGVLVDLGERAIGLLREQTLAIANEVEHLRAIYADHPSI 364 Query: 401 KGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCY 460 +GR G ++A + G G RA+G D R Y+ Y+ + +P G + D Sbjct: 365 QGRVIGSGMVPVEDAQDIGLLGYVGRASGHYPDERIEEAYAPYDELEVNVPQG-KLGDVA 423 Query: 461 TRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSW 520 TRV ++ EE+ +S R++ + L MPEGP A+ W Sbjct: 424 TRVWVRFEEIAESSRLISELLEKMPEGPIVAN---------------------------W 456 Query: 521 GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDL 580 P P F IE +G + ++ R VR PS + + A+R V D Sbjct: 457 LPPEPGVSGFAAIEGWRGEIAAWVRFGEGGQIDRCFVRDPSVINWLGLELAVREVPVPDF 516 Query: 581 IVYLGSIDFVMSDVD 595 + S + S D Sbjct: 517 PLNNKSFNCSYSGND 531 >UniRef50_Q6APF2 Related to hydrogenase, component E-formate hydrogenlyase subunit 5 n=1 Tax=Desulfotalea psychrophila RepID=Q6APF2_DESPS Length = 509 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 106/500 (21%), Positives = 179/500 (35%), Gaps = 50/500 (10%) Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTK-LFPNANWYERETWDLFGITFDGHPNLRRIM 155 HL+++ RNRD L V E + T + + +ERE + +GIT DGHP L+ + Sbjct: 58 HLLAVVRNRD--LYVIGTEVGKSFQSLTGAVSEKFHMFEREIAEQYGITPDGHPWLKMVR 115 Query: 156 MPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLN 215 + + G AK E E + Sbjct: 116 YHKNYAG---------------------AKDVFGNNYGKENIPGNYPFFSVEGESIHEVA 154 Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 +GP H Q GEE++ +GY HRG EKM + + I Sbjct: 155 VGPVHAGIIEPGHFRFQCAGEEVLHLEIQLGYQHRGIEKMLPTLPQKRFPIICESIAGDT 214 Query: 276 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 + + A+E LAGI+V +IR EL RI +H+ + D P + Sbjct: 215 SIGHGLSMCQAIEGLAGISVDRGAKIIRTTALELERICNHIGDLGALAGDAAFNPPAAYF 274 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 R + +L++ ++G R R GGV H + +L+RE L + + + Sbjct: 275 GRIRGEFLNLLQVLSGNRFGKGLVRPGGVTHIMREEQRKLIREKLLEVTGEIENICDLIF 334 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGG 455 ++ R + + A + G G RA+GI +DVR + P Y Sbjct: 335 SAHTVQARFEHTGTVQHEMAKDLGLVGYSGRASGIAYDVRNSFPTECYRELPANENRVTN 394 Query: 456 VSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHF 515 D +R M++VEE+ SL+++ + + Sbjct: 395 -GDVNSRGMVRVEEIMHSLKLINILIEESENTASEVHMQDQILA---------------- 437 Query: 516 LQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGS 575 P + E +G S+ + +D R +++ PSF + + ++R Sbjct: 438 ---------PNAFIITLNEGWRGEISHCILTDKKGKVQRYKIKDPSFHNWTGLAMSLRNQ 488 Query: 576 LVSDLIVYLGSIDFVMSDVD 595 +SD + S + D Sbjct: 489 EISDFPLCNKSFNLSYCGFD 508 >UniRef50_D2R4P3 NADH dehydrogenase (Quinone) n=3 Tax=Planctomycetaceae RepID=D2R4P3_9PLAN Length = 401 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 122/424 (28%), Positives = 206/424 (48%), Gaps = 43/424 (10%) Query: 193 LTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGA 252 ++ ++ + D M +N+GP HPS HG R+VL+ DGE + P +GY HR A Sbjct: 1 MSINLDDPRVVEFDVRTDEMLVNMGPQHPSTHGVLRLVLRTDGEIVSQVEPHLGYLHRCA 60 Query: 253 EKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRI 312 EK+GE + +IPYTDR++YL + + L VEKL G + ++ +RV+++E+ RI Sbjct: 61 EKIGENLTPRQWIPYTDRMDYLAAMNMNLGWALTVEKLLGHQISEKARHLRVIIAEMGRI 120 Query: 313 NSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGW 372 SHL+ + + D+G +P +AF +R+KI DL E G R+ ++ GG DLP+GW Sbjct: 121 ASHLVGMGAYGLDLGTFSPFLYAFREREKILDLFEEACGARLTYSYLTPGGATADLPKGW 180 Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 + EFL + Y N+I R+ + A+ A+++G TG LR +G+D+ Sbjct: 181 LQKCEEFLKQFEPVIQEYHALLTTNSIFVKRTAAIGIMSAEMAIDYGCTGPVLRGSGVDY 240 Query: 433 DVRKARP---YSGYENFDFEIPVGGGV-----------------SDCYTRVMLKVEELRQ 472 D+R+ Y+ + FE+ V DC+ R +++ E+ Q Sbjct: 241 DLRRDGEERYTEMYDGYAFEVIVSRNGHYPADHDYPPVPKEAVLGDCWHRFYVRMLEVVQ 300 Query: 473 SLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQM 532 S+ ++ Q + + + +P E++ Sbjct: 301 SIDLVRQAIER-----------------------YSTASGDWGQPIKLTTKLPKGEAYLE 337 Query: 533 IEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMS 592 E +G +Y+ SDG+ + +R R R+ SF +L RG L++D+ +GS+D VM Sbjct: 338 TECPRGQMGFYIVSDGNAIPWRVRARSSSFCNLSITADLCRGCLIADVPAIVGSLDIVMG 397 Query: 593 DVDR 596 ++DR Sbjct: 398 EIDR 401 >UniRef50_A3ZL03 NADH dehydrogenase (Ubiquinone) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL03_9PLAN Length = 418 Score = 357 bits (916), Expect = 8e-97, Method: Composition-based stats. Identities = 129/441 (29%), Positives = 212/441 (48%), Gaps = 44/441 (9%) Query: 177 SPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGE 236 EA+ G+ D M +N+GP HPS HG R+VL+ DGE Sbjct: 1 MTVSFKHPCWHQRNEAVMEMAPTSGIVEIDVRTDEMLVNMGPQHPSTHGVLRLVLRTDGE 60 Query: 237 EIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVP 296 + + P IGY HR AEK+GE + +IPYTDR++YL G + + LAVEKL +P Sbjct: 61 VVSEATPHIGYLHRCAEKIGENLTPRQWIPYTDRMDYLAGMNMNLGWALAVEKLIDYDLP 120 Query: 297 DRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHP 356 ++ +RV+++EL RI SHL+ + T+ D+G+ +P +AF +R++I DL+E G R+ Sbjct: 121 EKARHLRVIIAELNRIASHLVGMGTYGLDLGSFSPFLYAFRERERILDLLEDACGARLTY 180 Query: 357 AWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEAL 416 ++ GG DLP GW + L FLD + Y N I R+ + A+ A+ Sbjct: 181 SYLTPGGATADLPPGWLQKLTGFLDQFEPVILDYHALLTNNAIFIKRTANIGVMSAEMAI 240 Query: 417 EWGTTGAGLRATGIDFDVRKARP------YSGY--------------ENFDFEIPVGGGV 456 ++G +G LR +G+D+D+R+ Y+GY ++ +P + Sbjct: 241 DYGCSGPVLRGSGVDYDLRRDGEERYTSLYAGYAFEVIVEKNGSYPRDHEYPPVPSDAVL 300 Query: 457 SDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFL 516 DC+ R +++ E+ Q++ +L Q + + + Sbjct: 301 GDCWHRFYVRMLEVIQAIDLLRQGIEK-----------------------YSQATGDWGT 337 Query: 517 QVSWGPVMPANESFQMIEATKGINSYYLTSDGST-MSYRTRVRTPSFAHLQQIPAAIRGS 575 + +P E++ E +G +Y+ SDGS + R R R+ F +L P R Sbjct: 338 PIKLATKLPKGEAYLETECPRGQMGFYIVSDGSGSIPLRARARSSCFCNLSVAPELCRDC 397 Query: 576 LVSDLIVYLGSIDFVMSDVDR 596 L++D+ +GS+D VM ++DR Sbjct: 398 LIADVPAIIGSLDIVMGEIDR 418 >UniRef50_B3E6C1 NADH-ubiquinone oxidoreductase chain 49kDa n=2 Tax=Deltaproteobacteria RepID=B3E6C1_GEOLS Length = 506 Score = 357 bits (916), Expect = 8e-97, Method: Composition-based stats. Identities = 101/534 (18%), Positives = 180/534 (33%), Gaps = 51/534 (9%) Query: 62 KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVP 121 + + ++ G R+ + G PA Y L++ + + + + N P Sbjct: 23 DQDRFLQTILEMTGRGWRVSS-YCGFPADGAITLYCLLASPADGVLGI-MQTICNGTEFP 80 Query: 122 TFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFEL 181 + P +ERE + GI F GHP + + R + Sbjct: 81 SIAVQCPQLQLFEREIAEQCGIRFVGHPWFKPVRF----------VHSAVRGHDAWGRAD 130 Query: 182 TKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDC 241 + Q ME + E + + +GP H Q GE++ Sbjct: 131 DQPIQVGVMEYYRVEGE-----------EIHEVAVGPVHAGVIEPGHFRFQCHGEQVFHL 179 Query: 242 VPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNV 301 +GY HRG E++ + + I + + Y + +E L+ P + Sbjct: 180 EISLGYQHRGIEQLLLNGPHPQTLRQMEAIAGDTSIGHGLAYCMVLESLSKSHPPATAHA 239 Query: 302 IRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRI 361 +R + EL R+ +H + DVG + F R ++ I G R + Sbjct: 240 LRGIALELERLANHTGDLGAIAGDVGYLPTASFCGRIRGDFLNMSAFICGSRFGRGLLKP 299 Query: 362 GGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTT 421 GG L + L+ L L S + + R +G A+ A+E G Sbjct: 300 GGTVFGLDQAQREELQNRLATGRAELTSAIELLWNTPSVMSRLEGTGVVSAESAVEMGLV 359 Query: 422 GAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCL 481 G RA G+ DVR P+ Y I D +R ++ EE ++SL + L Sbjct: 360 GPAARACGLKRDVRSDYPFGIYRMAQVPIATAHH-GDVCSRSSVRWEECQKSLDFCVEQL 418 Query: 482 NNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINS 541 +P+G A+ P+ + + E +G Sbjct: 419 RQLPKGAHAAELK---------------------------PLQGDQLTVALTEGWRGEIC 451 Query: 542 YYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + +D + + ++ PSF + Q + A+R +SD + S + D Sbjct: 452 HLAITDSAGRFRQYKITDPSFHNWQGLAMALRNEQISDFPLCNKSFNLSYCGFD 505 >UniRef50_A5GBN1 Ech hydrogenase subunit E n=20 Tax=cellular organisms RepID=A5GBN1_GEOUR Length = 359 Score = 357 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 92/389 (23%), Positives = 172/389 (44%), Gaps = 30/389 (7%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + +GP HP L + E+++D +P I Y HRG E++ E++ + + Sbjct: 1 MAQRNIIPIGPQHPILPEPIHFDLVTEDEKVIDAIPSISYVHRGLERLVEKRDFIDFAHV 60 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 DRI L ++ + Y AVE++ I VP R +R + +EL RI+SH+ ++ G Sbjct: 61 ADRICGLCSFMHSLGYCQAVEEIMSIEVPQRALYLRSIWAELSRIHSHIFWLGAAADAFG 120 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 + A R+ + D+ E TG R+ ++GGV D+ + + L + L Sbjct: 121 FESLFMQAMRLREPVLDIFEETTGGRVILGVCKVGGVRRDIDGDSLKGIVNRLTTLKGAL 180 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 L + ++ R GV ++A G G RA+G+ D+R A Y+ Y+ + Sbjct: 181 EELSNVFLNDYSVQHRLAGVGFLSREDAYTLGCVGPMARASGLAIDMR-ALGYAAYKYLE 239 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 E PV DC+ R +++ E+ ++ ++ Q + +P GP Sbjct: 240 VE-PVVESAGDCHARCRVRIREIFHAIDLIRQAVGKIPAGPVDV---------------- 282 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 P E + +E +G +Y+ +G+ R RVR P+F+++ Sbjct: 283 ------------KVTGTPDGEYYSRVEQPRGEVIHYVKGNGARFLQRFRVRVPTFSNIPA 330 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + ++GS ++D+ + ++D +S +R Sbjct: 331 MVKVLKGSQLADVPNIILTLDPCISCTER 359 >UniRef50_A6LMC4 NADH-quinone oxidoreductase subunit D n=14 Tax=cellular organisms RepID=NUOD_THEM4 Length = 367 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 133/389 (34%), Positives = 202/389 (51%), Gaps = 23/389 (5%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 + L GPNHP HG F + + ++G+ +V P G+ HRG EK+ ER+ W+ + Sbjct: 1 MGEVKLFFGPNHPGMHGNFSVHMYVEGDTVVKARPLPGFLHRGFEKLMERRLWYQNLALI 60 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 RI +NE+ Y LAVEK+A I VP+R IR+++ EL RI +HL S +G Sbjct: 61 PRICVPEPDINELCYALAVEKIAKIDVPERAQWIRMIVLELARIANHLWSFSGIGGPIGL 120 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T F+ DR +I D+ E +TG R++ + GGV DL ++++ E LD++ RL Sbjct: 121 YTGSFWGTADRDRILDIFENLTGARVYHMYIVPGGVRKDLTPKIEKMILETLDYIESRLP 180 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 YEK L+N I+ R +G+A + ALE G TG GLRATG+ +D+RK PY Y+ DF Sbjct: 181 DYEKLILKNRIVHTRLKGIAKLDRETALEMGVTGVGLRATGVPYDIRKVDPYLFYDKVDF 240 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 E+P D + RV LK E+ QS++I++Q L MP G Sbjct: 241 EVP-FSTDGDAFARVYLKFREIFQSIKIVKQALEKMPVGKVNTPIS-------------- 285 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH-LQQ 567 + +P +++ IE+T+G YY+ SDG YR VR S+ Sbjct: 286 -------EGSALRFRVPKGQAYVHIESTRGEYGYYMVSDGGEKPYRVVVRGASYPQTFIG 338 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G+ + D+ ++L ++D +VDR Sbjct: 339 VEKYLPGTRIEDVPIWLSTMDVCAPEVDR 367 >UniRef50_C9RKY1 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKY1_FIBSS Length = 379 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 141/406 (34%), Positives = 220/406 (54%), Gaps = 29/406 (7%) Query: 193 LTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGA 252 ++ + N + F+N+GP HPS HGA R+ L++DGE IV+ VP GY HRG Sbjct: 1 MSHQLPPGFRLERKSNTEEFFINMGPQHPSTHGALRLTLRMDGETIVEVVPHFGYIHRGM 60 Query: 253 EKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRI 312 EK E S+ YI +DR +YL N + V+A+EK + VP R IRVML EL RI Sbjct: 61 EKQAESMSYLQYIAMSDRQDYLTAIQNNLGVVIALEKGMNVGVPLRGEYIRVMLQELGRI 120 Query: 313 NSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGW 372 SHL++ F D+G T + F F +R+ I+D++E +TG R+ +FR GG +D+P + Sbjct: 121 ASHLVFYGCFGGDLGGQTCLLFGFKEREMIHDILEEVTGSRLTTNFFRPGGSRYDVPDTF 180 Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 ++ FLD M + YE+ +N I+ RS G+ ++A+ +G +G LRA+G++F Sbjct: 181 IPRVKAFLDHMEDTMKDYERFLSKNIIVLERSIGIGVLSKEDAIAYGCSGPVLRASGVNF 240 Query: 433 DVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKA 491 DVR+A PYS Y+ DF++PV DCY R +++ E+ +S++IL QC+ P EGP+++ Sbjct: 241 DVRRANPYSIYDQLDFDVPVFHN-GDCYDRYKIRIAEIHESMKILRQCVEKFPTEGPWRS 299 Query: 492 DHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST- 550 +P + IE KG+ + Y+ + + Sbjct: 300 KE--------------------------KPVRLPVGRYYSEIETAKGLYATYVVAATTGE 333 Query: 551 MSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR R PSF H+ I +G +SDL+ + ++D V+ ++DR Sbjct: 334 KPYRIHTRGPSFPHIAAINKMAQGHKISDLVTIMATLDPVIPEIDR 379 >UniRef50_P15689 NADH-ubiquinone oxidoreductase 49 kDa subunit n=10 Tax=cellular organisms RepID=NDUS2_PARTE Length = 400 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 131/396 (33%), Positives = 206/396 (52%), Gaps = 14/396 (3%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 +N GP HP+AHG R++LQL+GE + IG HRG+EK+ E + + +PY DR++Y Sbjct: 6 VNFGPQHPAAHGVLRLILQLNGEVVEKMDIHIGLLHRGSEKLMETKPYLQSMPYFDRLDY 65 Query: 274 LGGCVNEMPYVLAVEKLAGIT-VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 + V E Y LA+E L T ++R M EL RI +H+L I+ D+G+M+ + Sbjct: 66 VSMMVQEHAYCLAIEALLNTTNYTANFVLVRTMFDELTRILNHMLAIACHALDIGSMSSI 125 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHD-LPRGWDRLLREFLDWMPKRLASYE 391 F+AF +R+KI + E + G RMH A++R V + L + EF + L+ Sbjct: 126 FWAFEEREKIMEFYERVCGRRMHAAFYRPNEVNLNFLSVKLLTDILEFNNNCLTTLSEMH 185 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA--RPYSGYENFDFE 449 N I K R + + K+ L++G TG R+TGI D+R Y+ Y +F Sbjct: 186 NILTYNKIWKQRLVNIGSISYKDCLDFGLTGVMARSTGIKRDLRMDAFDTYANYYYLNFR 245 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM--------PEGPFKADHPLTTPPP- 500 G D Y R ++++ E+ +S+ I+ Q + + P KA + Sbjct: 246 -SYTGQAGDSYDRFLIRMNEMSESINIISQAIFKLTTSKNTCSPASILKALNKKKFISQT 304 Query: 501 KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP 560 + +E LITHF S G + +N ++Q +E+ KG L SDGS YR +VR+P Sbjct: 305 YKNEYSSMEKLITHFKYWSEGFKIQSNWTYQAVESPKGEFGVTLVSDGSNKPYRCKVRSP 364 Query: 561 SFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 ++ HLQ +P +G L++DL +G+ID V ++DR Sbjct: 365 AYHHLQVLPKMSKGHLLADLSALIGTIDIVFGEIDR 400 >UniRef50_B8IYV5 NAD-dependent dehydrogenase subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IYV5_DESDA Length = 565 Score = 354 bits (908), Expect = 7e-96, Method: Composition-based stats. Identities = 108/566 (19%), Positives = 194/566 (34%), Gaps = 13/566 (2%) Query: 38 ATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGM---DERLRTHREGLPA-ADFS 93 R V + + R + E+ D L+ + G+ D L H + P Sbjct: 4 DYREAVTLNKLGRHSVSELRDILRHALAGGWRVLAFFGIPDMDAPLDAHNDDTPEQPRAV 63 Query: 94 VFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRR 153 +++ D R +M + + T P +++ERE ++ +G+ GHP L+ Sbjct: 64 SLCCILAHDGTRRLMARCTPPV--TAFVSMTPELPQLHYFEREIYEQWGVEPVGHPWLKS 121 Query: 154 IM-MPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFM 212 + +P + + ++ E + + A E D Sbjct: 122 VRRIPDSAEAAARNAAESQTSSAAPAQESAEVVPSPALTASARPQTLPYPFYRVEGADVH 181 Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 + +GP H Q GE ++ +GY HRG E M + + + Sbjct: 182 EVAVGPVHAGIIEPGHFRFQCYGENVLHLEIALGYQHRGLEAMITQGPAGRRLHLLECAA 241 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 + + + +E++ G +R ++R + EL R+ +H + D G + Sbjct: 242 GDSTVAHATAHCVLLERMTGQQPDERAQLLRRIGLELERLANHTGDLGAIAGDTGFLPTA 301 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 + R ++ ++ G R R GGVA+DL + + Sbjct: 302 SWNGRIRGDFLNITASLCGNRFGRGLLRPGGVAYDLAPSECADMLARVRAAWHDARGSVD 361 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE--I 450 L ++ R A E G G RA G+D D R P + E Sbjct: 362 VMLDAVTVRNRLADTGMVEPATARELGLVGVAARACGLDVDARFHMPL---SDLPCEGCA 418 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPF-KADHPLTTPPPKERTLQHIE 509 P D R +++ EL SLR+LE L + P K + T Sbjct: 419 PRLEITGDVMARTLVRSRELDDSLRLLEFDLARLGALPHTKNAATAESTVSAPATAAATN 478 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 T T S+ + P + ++E +G + +D +V PSF + + Sbjct: 479 TSGTAAEAASFDALPPDTLAVALVEGWRGEVCHVGLTDSRGRLLVYKVVDPSFHNWAGLA 538 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVD 595 A+RG+ +SD + S + D Sbjct: 539 MALRGNQISDFPLCNKSFNLSYCGHD 564 >UniRef50_Q0W3I1 Ech hydrogenase, subunit E n=2 Tax=Euryarchaeota RepID=Q0W3I1_UNCMA Length = 359 Score = 352 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 98/383 (25%), Positives = 166/383 (43%), Gaps = 28/383 (7%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + GP HP R+ L LDGE + D + GY HRG EK E ++ +R+ Sbjct: 5 VQFGPQHPVWIEPIRLKLALDGELVKDVELEAGYVHRGLEKKFE-WDYNKAAYLAERVCG 63 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + + + LAVE + +P R VIR ++ EL R++SHLL I ++ +G Sbjct: 64 ICTQHHSTCFCLAVESTMKLEIPRRAAVIRNIMLELERLHSHLLAIGLTLEAIGFENLFM 123 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 F +R+ + D+ E TG R+ +GGV ++ + + +F D + KR E Sbjct: 124 LCFRNREIVLDVFERTTGNRVLHGINLVGGVTRNIGPEMAQEIMDFCDTIEKRCRDLEDM 183 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 + + +K R +GV + AL++ G R +GI +DVR PY Y + V Sbjct: 184 IVHSRTIKDRMKGVGILSKQTALDYSVVGPIARGSGIPYDVRIDAPYLLYGELKMK-HVV 242 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D + R +++V EL QS+ ++ Q + + P Sbjct: 243 EEGCDVWARSIVRVRELFQSIDLIRQLVPMLEGLP------------------------- 277 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 ++ MP + F +E +G Y++ S R +VRT ++A+ + I+ Sbjct: 278 -DDILAKSKTMPDGDGFARVEPPRGELFYFVRGKKSKELDRVKVRTSTYANGPALIPVIK 336 Query: 574 GSLVSDLIVYLGSIDFVMSDVDR 596 G ++D+ S D + DR Sbjct: 337 GCQLADVGPITISYDPCIGCFDR 359 >UniRef50_C8XAS3 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAS3_NAKMY Length = 506 Score = 352 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 104/515 (20%), Positives = 191/515 (37%), Gaps = 49/515 (9%) Query: 83 HREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFG 142 V Y ++ + L + D H+P+ L A +ERE DLFG Sbjct: 38 DDPAERGGTLRVVYVFTRAGTDQRVELTLRCDPADPHLPSLAGLSFPAGRFEREIRDLFG 97 Query: 143 ITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGM 202 I DGHP R++ W ++D + Sbjct: 98 IVPDGHPMPSRLVRHFHWP-----------------RGWHPMRRDAGPPPPFGDVDGPYP 140 Query: 203 KRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWH 262 R E + +GP H G + GE +++ + + HRG EK+ ++ Sbjct: 141 FRTVEGPGVYEIPVGPVHAGMIGPGHFRFSVVGETVLNLKARLWFVHRGLEKLFAGRAVA 200 Query: 263 SYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF 322 + + +R+ + + YV AVE +G+T+ IR +L EL R+ +H+ I Sbjct: 201 AGVELAERVSGDTTVGHALAYVRAVEDASGVTLDPAAQRIRAILLELERLYNHIGDIGAL 260 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDW 382 DVG A R+++ + +A+TG R+ +GGV + L Sbjct: 261 ANDVGHGILNNHALRIRERLLRINDAVTGHRLMRGAIVVGGVRVRVLPDAGE-----LAA 315 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 + A AL +++++ R G A ++A++ GT G RA+G+ D R P G Sbjct: 316 VAADCAEVVDLALGHSVVRDRFTGTAMLSHRQAVDLGTLGYVARASGVAVDARFDHPVPG 375 Query: 443 --YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPP 500 Y+ + + D +R +++ +E++ S+R++ Sbjct: 376 LVYDPAE-RLSTHPTDGDVASRFLVRAQEIQSSVRMI----------------------- 411 Query: 501 KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTP 560 ++T + S ++E +G + + D R R+ P Sbjct: 412 -AALAGQVDTTAPREVGGSTSSAAGVRAGVGIVEGWRGTIVHRVELDADGRLTRVRIVDP 470 Query: 561 SFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 SF + +P A+ ++V D + S + + D Sbjct: 471 SFFNWPALPLAMADTIVPDFPLANKSFNLSYAGND 505 >UniRef50_C7N626 Ech hydrogenase subunit E n=25 Tax=cellular organisms RepID=C7N626_SLAHD Length = 362 Score = 352 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 103/390 (26%), Positives = 174/390 (44%), Gaps = 29/390 (7%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + GP HP + L + E++++ +P IG+ HRG EK+ E++ H +I Sbjct: 1 MGKATVIPFGPQHPVLPEPLHLDLVVQDEKVIEVIPQIGFIHRGLEKLVEKKDIHQFIYV 60 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +RI + + + Y VEKL G+ VP R +RV+L EL RI+SHLL++ G Sbjct: 61 AERICGICSFGHSLGYAETVEKLMGVEVPRRAEYLRVILHELSRIHSHLLWLGLAADAFG 120 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 ++ R+++ D+ EA TG R+ + +IGGV D+ + + LD M Sbjct: 121 FEALFMHSWRIRERVLDIFEATTGGRVILSAVQIGGVIRDIDDEELKQISATLDGMRSEY 180 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 A L +T ++ R V +A + G RA+ + FD R Y + Sbjct: 181 AELMATFLNDTSVRSRLVNVGRLTQTQAEDLCMVGPFARASNVKFDCR-MLGNGAYGELE 239 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 P+ DCY RV ++ +E+ QS+ I+++ + +P LT Sbjct: 240 NFQPILDDEGDCYARVRVRCKEVIQSIDIIQELIAKIPHDGIGERSKLT----------- 288 Query: 508 IETLITHFLQVSWGPVMPAN-ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 P ++ ++E +G YY +GS R R+RTP+ +L Sbjct: 289 ----------------PPDGAQAANVLEQPRGECYYYARGNGSKNLERMRMRTPTSQNLA 332 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + AA G+ ++D+ L +ID +S +R Sbjct: 333 GLVAACEGAELADVPNILLTIDPCISCTER 362 >UniRef50_C6NX38 Ni,Fe-hydrogenase III large subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX38_9GAMM Length = 527 Score = 350 bits (898), Expect = 9e-95, Method: Composition-based stats. Identities = 101/501 (20%), Positives = 175/501 (34%), Gaps = 49/501 (9%) Query: 97 HLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM 156 H + + + + L N P+ + +FP A ER DL G+ G+P++R + Sbjct: 73 HAFFLTESGYLWCTLPLPANLREFPSLSSVFPTACRQERAIRDLLGLEPLGNPDMRPWLR 132 Query: 157 PQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL 214 W HPL A D+ + L+ E R +D + Sbjct: 133 HAAWPANIHPL------------------AMSDIPEDILSCAGEIDYSYRAPAGQDLHEI 174 Query: 215 NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYL 274 +GP H GE+IV +GY H+G E++ Q + + R+ Sbjct: 175 PVGPVHAGTIEPGHFRFTCLGEQIVQLEERLGYCHKGIERLFVGQPPDAALRLAGRVSGD 234 Query: 275 GGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFF 334 Y +AVE +A I + R +R + E R+ +HL + D G + Sbjct: 235 SSVAYAWSYAMAVESVAEIELSQRALALRGLCLERERLANHLGDLGALGNDAGLAFALTQ 294 Query: 335 AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAA 394 ++++ I G R ++GGVA DL + + + +RL + + Sbjct: 295 LLAIKEELLRENAEIFGHRYLMDVVQLGGVAVDLDGRALQHIEQSSKAWRRRLETLDLLL 354 Query: 395 LQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGG 454 ++ L+ R A+ A WG G RA+G +D+R Y+ + EI + Sbjct: 355 QEHAGLRDRLVATGPITAERAAYWGMAGLSGRASGQAWDLRTHFAPPPYDRYPMEISLAR 414 Query: 455 GVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITH 514 D R ++ E+ + LR E + N+P G + Sbjct: 415 R-GDVAARWAVRFAEVFRCLRWQENVVANLPGGSPRVALKAF------------------ 455 Query: 515 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRG 574 E + E +G L R PS++ + A+ Sbjct: 456 ---------PKDGEGLGICEGWRGEVFVALRL-EDGHIARCHPHDPSWSLWPVLEEAVCQ 505 Query: 575 SLVSDLIVYLGSIDFVMSDVD 595 +V+D + S + S D Sbjct: 506 DIVADFPLINKSFNLSYSGQD 526 >UniRef50_C1TPP0 Ni,Fe-hydrogenase III large subunit n=2 Tax=Synergistaceae RepID=C1TPP0_9BACT Length = 413 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 98/397 (24%), Positives = 176/397 (44%), Gaps = 26/397 (6%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 L +GP H L ++GE I D V G HRG E M ++ I Sbjct: 1 MSETKTYKLPIGPVHVGLKEPITAWLDIEGEHIKDAVIRPGAIHRGVEFMARERNPIQVI 60 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 +R+ + + + +V AVE A I VP R IR M+ EL RI+SH+L+ Sbjct: 61 YLAERVCGICSFSHAIAFVKAVEDAAQIEVPIRAQYIRSMVLELERIHSHILWSGVACYT 120 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 +G + R+K+ D++EA++G R++ A +GGV D+ R + + + + Sbjct: 121 IGFDSAFHLGMMLREKVMDVLEALSGNRVNYAVTTVGGVRWDVTPAVVRTVMDMIHYYRN 180 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 AS+ +AA+ + ++K R + V ++A+++ G R +G+ DVR + PY Y + Sbjct: 181 EFASFYEAAINDPVVKARLRDVGVLTTEQAIKYCALGPTSRGSGVRADVRWSAPYDAYCD 240 Query: 446 FDFEIPVGGGV-----SDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPP 500 E V D Y R +++V E+ QSL ILE+ + +PEG + + Sbjct: 241 IHVEPVVPQDYTGEVHGDVYDRFLVRVYEVLQSLDILEKIMEGLPEGSITFEPKVNKLLT 300 Query: 501 KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYR-TRVRT 559 + IEA +G +++ + + + +VR Sbjct: 301 V--------------------LKKAEGVGYGCIEAPRGDDTHAVGLKAQQENVQWWKVRA 340 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 P++++ P + + ++D + + SID +S ++R Sbjct: 341 PTYSNAVSWPLMFKDNELADAPLIINSIDPCISCMER 377 >UniRef50_B6AS24 Putative NADH-ubiquinone oxidoreductase, 49 kDa subunit n=2 Tax=Leptospirillum sp. Group II RepID=B6AS24_9BACT Length = 499 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 106/532 (19%), Positives = 171/532 (32%), Gaps = 65/532 (12%) Query: 64 PKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTF 123 L G D L D +L+ +++ P+ Sbjct: 32 GSRGGRFVSLWGTDHPEGFVYAALAGPD-------------GLFVLRSPVSKESGTFPSL 78 Query: 124 TKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTK 183 T LFP A+ ER D++G +G + R + GH K+ PF Sbjct: 79 TALFPLASRPERAVRDVYGWIPEGLSDTRPWIRQDDHGGHGSGKERSPEGGRDYPF---- 134 Query: 184 AKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVP 243 + E + +GP H Q+ GE+++ Sbjct: 135 --------------------VRVDGEGVHEIPVGPVHAGIIEPGHFRFQVVGEKVLRMEE 174 Query: 244 DIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIR 303 +GY H+G + + + RI + + AVE + P+R +R Sbjct: 175 RLGYTHKGIRGLLAHRPVGDVTRLSSRISGDSAVAFQWAWAQAVECATQTSPPERAVWLR 234 Query: 304 VMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGG 363 +L E RI +HL + D G + ++ + I G R GG Sbjct: 235 AILLERERIANHLGDLGALGNDAGFAFGLVQFGRLKEDLLRTNGQIFGHRYLMDTICPGG 294 Query: 364 VAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGA 423 VA D G LR L + + + + ++ L+ R G A WG G Sbjct: 295 VAVDPGDGALSRLRSELPRLQEEIHVLKTIYDEHGGLQDRFAGTGVLDPLLAGAWGLGGV 354 Query: 424 GLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNN 483 RA+G D+R P Y+ + + D RV ++ +E+R SL LE L + Sbjct: 355 VGRASGQLLDLRHDHPVRPYDIERVPVALAKR-GDVGARVQVRFQEIRHSLAFLESVLAS 413 Query: 484 MPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYY 543 P GP + P E F IE +G + Sbjct: 414 FPPGPARR---------------------------GLVCRSPKAEGFGWIEGFRGEVLAW 446 Query: 544 LTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + D PS+ + A+ G+LV+D + S + S D Sbjct: 447 VRLDRDGNVEDAHFHDPSWLLWPALERAVPGNLVADFPLINKSFNLSYSGHD 498 >UniRef50_A3DKH4 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 Tax=Desulfurococcaceae RepID=A3DKH4_STAMF Length = 406 Score = 347 bits (891), Expect = 6e-94, Method: Composition-based stats. Identities = 103/397 (25%), Positives = 181/397 (45%), Gaps = 24/397 (6%) Query: 200 WGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ 259 + + E + + +GP HP+ H + DGEEIV+ + GY+HRG EK+GE+ Sbjct: 1 MAITKVIEVPYALEIPVGPQHPALHEPVLLKAYADGEEIVNVEINTGYNHRGIEKLGEKN 60 Query: 260 SWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYI 319 +++ I R+ + V+ YV A+E++ + +R +RV+ E R++SH+L Sbjct: 61 TFYRDIFIVARVCGICNLVHANCYVRALEEILDMHPNERAKYLRVLAMEFERVHSHMLIN 120 Query: 320 STFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREF 379 + + +G + DR+ I E ITG R+ + IGGV D+ L + Sbjct: 121 AVMAEIIGFDSLFMNIMLDRENIMKAKEIITGNRVLSDYMMIGGVRRDIDSVKKDKLLKI 180 Query: 380 LDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARP 439 +D + RL Y+K +++ + R V + + G RA+G+ DVR + Sbjct: 181 IDKVLPRLHYYKKLFMEDDTILKRLVDVGVIKRSDVTRYTFVGPPARASGVKIDVRVSEK 240 Query: 440 YSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 Y Y + F + V D + R++++ +E +SL + + L ++P P Sbjct: 241 YEVYGDIPFNM-VTRNEGDSWARMIVRWDEAIESLNMAKYILEHLPNDGNPVPDERRLP- 298 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 P E+F +EA +G +YY+ SDG YR +++T Sbjct: 299 ----------------------RRFPPGEAFTRVEAPRGELTYYVMSDGKPKPYRLKIKT 336 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PSF ++ G ++DL V L S+D +S ++R Sbjct: 337 PSFTNIINSGYLYVGHTIADLPVILVSLDPCISCMER 373 >UniRef50_B8J7E4 NADH-ubiquinone oxidoreductase chain 49kDa n=14 Tax=Bacteria RepID=B8J7E4_ANAD2 Length = 521 Score = 347 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 101/508 (19%), Positives = 172/508 (33%), Gaps = 52/508 (10%) Query: 88 PAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDG 147 V L R +L +A+ P+ P A +ERE + +G+ +G Sbjct: 65 AGGGVLVTAVLADDPEGRLALLATRVADA---FPSIAAELPAAQAFERELAEQWGLRPEG 121 Query: 148 HPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTE 207 HP L+ + A + E Sbjct: 122 HPWLKPL---------------------RFEPPRRAAPDPFGRQDPRATIPGEYPFFRVE 160 Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 E+ + +GP H Q GE + +GY HRG E++ + Sbjct: 161 GEEVHEVAVGPVHAGIIEPGHFRFQCHGERVFHLEIVLGYQHRGVERLLRGGPDRRSMAL 220 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 + I + + Y AVE LAG+ R +R + EL RI +H+ + DVG Sbjct: 221 AESIAGDTAVGHGLAYAKAVESLAGVAPTARAMSLRGIGLELERIANHVGDLGALAGDVG 280 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 + + R + + V I G R + GGV HDL R L + ++ Sbjct: 281 FLPTASYCGALRAEFLNAVAEICGNRFGRSLVCPGGVKHDLDAEAARALAARVRAAWEKT 340 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 ++ ++ R +G A G G RA+G+D DVR+ + Y F Sbjct: 341 RRAASLMFESPSVRARFEGTGTVPTALAQALGMVGPAARASGVDRDVRRDHAFGIY-RFS 399 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 D R ++++ E +S+ + L +P GP + Sbjct: 400 HVAVTTAENGDVLARALIRLLEAERSVEFVLDQLERLPGGPSRT---------------- 443 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 + GP+ P M+E +G ++ +D +V+ PSF + Sbjct: 444 -----------APGPLAPGALVVSMVEGWRGEIAHVAVTDAQGRLEAYKVKDPSFHNWFG 492 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + A+R +SD + S + + D Sbjct: 493 LAMALRDGQISDFPLCNKSFNLSYAGHD 520 >UniRef50_C6PUG2 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG2_9CLOT Length = 526 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 119/578 (20%), Positives = 207/578 (35%), Gaps = 57/578 (9%) Query: 22 IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGD-FLKKLPKPYVMLFDLHGMDERL 80 I + + + V ++ + + FL K + +D Sbjct: 3 IDLFKEELSNLKYNSEIKNKNEIYVDVEISHVKSLISLFLVKYKLKF---IAQFCVDNSN 59 Query: 81 RTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDL 140 + DF + L + + ++++ E + TF + ++ +ERE DL Sbjct: 60 EEN----AQNDFMINIILSNSKKRYFVIVRYKTQEE---IKTFQDILFQSHLFEREMCDL 112 Query: 141 FGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPE 198 FG+ + R+I+ + W +PLRK +P AK + + E L +K + Sbjct: 113 FGLKIKDGIDTRKIVKHEKWPEDVYPLRKSFPYG-----------AKLEEKNEILPYKCK 161 Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 E + +++GP H + GE I + + Y HRG EK+ E Sbjct: 162 EAFG------DGAYQISVGPVHAGIIEPGHFRFSVIGEAIENLELRLNYKHRGIEKICEN 215 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY 318 +R+ Y L VEKL P + +RV+L EL RI + L Sbjct: 216 VDASKLNLVFERMACESSAAYAESYALLVEKLLSYDTPQEIKALRVVLLELERIYNFLGD 275 Query: 319 ISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 IS D+G P ++I+ L E ITG R G+ D + +++ Sbjct: 276 ISGICVDIGFSYPAKRFGAFGEQIHKLCERITGSRFMRNVIIPCGINIDFTKEHIEDIKK 335 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKAR 438 L+ M KR+ + L + R + K A + TG RA+GI++DVRK+ Sbjct: 336 TLNGMKKRMDKIIEITLDSVSFLDRVENTGIVRNKTAKKLYMTGITGRASGINYDVRKSF 395 Query: 439 PYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTP 498 PY Y + + + R LK++E+ + + L+ + + K Sbjct: 396 PYEIYGILK-KNNNTLEIGGVFERYKLKIKEIYDAYNFIFASLDFINKDILKTKTEFKLV 454 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVR 558 E+ +E KG Y R + Sbjct: 455 EET--------------------------EALAAVETVKGELIVYGKVGKDNKFNRIYFK 488 Query: 559 TPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 TPS + + A+ G +V D + S + S+ D+ Sbjct: 489 TPSVTNWNGLTYAVLGEIVPDFPLCNKSFNMSYSENDK 526 >UniRef50_B3T914 Putative Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=2 Tax=environmental samples RepID=B3T914_9ARCH Length = 384 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 118/405 (29%), Positives = 201/405 (49%), Gaps = 26/405 (6%) Query: 192 ALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRG 251 K G++ ++ M LN+GP HP + G RI+L++DG+ IV C PD GY HRG Sbjct: 6 NPKSKEIFPGLQLEKVDDRIMTLNVGPQHPGS-GHMRIILKVDGDYIVHCDPDPGYVHRG 64 Query: 252 AEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFR 311 EKM E +++ + IP+ +R C PY L VE+L G+ VP+R IRV+ +EL R Sbjct: 65 EEKMAEYRNYITNIPHLERPVIHDSCNILYPYCLGVEELLGLEVPERAKYIRVIAAELNR 124 Query: 312 INSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRG 371 +++ + +G T + DR+ + DL++ +TG R+ ++F GGV +D+P Sbjct: 125 CVYTQYWLAIYGIFLGHSTMFMWPMGDRELVIDLLDKMTGARVTHSYFVPGGVRNDIPPN 184 Query: 372 WDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGID 431 ++ + +++ KRL Y N IL R++ ++A++ GTTG+ LRA+G+D Sbjct: 185 FEDVCLRQVNYFEKRLKEYADMFYDNPILISRTKDTGILSREDAIKLGTTGSVLRASGVD 244 Query: 432 FDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKA 491 FD+RK PY YE DF+ V D Y R + ++ +S RI+ L MP+ Sbjct: 245 FDIRKKEPYDVYEELDFQTNVLKE-GDSYARSKIPWLDMFESCRIIRDALKKMPKSGSVR 303 Query: 492 DHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM 551 +++ P E ++ +E+ +G ++ S G Sbjct: 304 ------------------------VKLKPNPKGGDTEVYRRVESGRGSLGMHIISRGKPQ 339 Query: 552 SYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR ++ SF +L +P + G ++ ++ S+++ + DR Sbjct: 340 PYRLKISVGSFRNLIAMPHLLTGEMLGNMPAVYWSLNYWPVEADR 384 >UniRef50_D0L1P0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=2 Tax=Gammaproteobacteria RepID=D0L1P0_HALNC Length = 518 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 115/571 (20%), Positives = 199/571 (34%), Gaps = 61/571 (10%) Query: 31 PDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAA 90 P++ T + ++ ++LLE L L D R++ A Sbjct: 4 PESSTERPIELLFETQTLRPDKLLEAAQSLLDD------LGDTPSAHGRIQCAYALRDAE 57 Query: 91 D-FSVFYHLISIDR-NRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGH 148 FSV Y + I ++ + +P+ + P WYERE DL+GITF H Sbjct: 58 GKFSVRYIISQGANQPWGIW---SVDASSGTLPSLANVLPLLGWYEREIQDLYGITFTDH 114 Query: 149 PNLRRIMMPQTWK--GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGT 206 P +++ + + PL+ + +A E + Sbjct: 115 PEPYPLILHEGFIPAKPPLQTGFDPKAEPIRG------------------QAEPFAEANM 156 Query: 207 ENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 +D L GP + + V GE I+ P + Y HR E E + Sbjct: 157 VGDDIQRLPFGPIRADVVESAQFVFHYIGEGILHYHPRLFYKHRAMEARFEGVPISAACV 216 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 +R+ + + + + A+E G P R RV+L+EL R+ +HL + + Sbjct: 217 LAERVSGVDSVAHVLAFSQAMEAALGWQAPLRAQAWRVVLAELERLYNHLQFFGHLAKTT 276 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 +++ + +TG R GG+ DL L L+ + + Sbjct: 277 TLKVAEAEGIWLEEQVKQINGRLTGSRFLRGVIVPGGLRRDLDA---TALIADLNALQPQ 333 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + Y R + A + G TG RA+ +D D+R+ Y+ Y Sbjct: 334 IEDYLDTLANTRSYLDRLLTTGVLPRQVAFDQGATGPIERASDLDRDLRRDHGYALYPEL 393 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 F +P D R ++ +E+RQSL ++ Q LN + GP PP Sbjct: 394 QFAVPTATE-GDADARARVRDQEIRQSLHLIRQALNKLEPGPICRTESTIDPPM------ 446 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSD-GSTMSYRTRVRTPSFAHL 565 EA +G Y + D + R +++ PSF++ Sbjct: 447 -------------------EGMGLGWAEAVRGGLIYAVHWDAKTERLTRVKIKEPSFSNW 487 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + P + S + D + S ++ DR Sbjct: 488 RVFPFTVNDSNMMDYAINEASFGLSVAGADR 518 >UniRef50_A7C1S4 NADH-ubiquinone oxidoreductase subunit n=3 Tax=cellular organisms RepID=A7C1S4_9GAMM Length = 380 Score = 345 bits (884), Expect = 4e-93, Method: Composition-based stats. Identities = 125/404 (30%), Positives = 186/404 (46%), Gaps = 27/404 (6%) Query: 196 KPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKM 255 E L GPNHP G + + ++L G+E+V D GY HRG EK+ Sbjct: 1 MRPENYQPVEHPASHEYELYFGPNHPGIEGNYALKVRLSGDEVVGVKADAGYLHRGFEKI 60 Query: 256 GERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH 315 E + W + RI E Y AVE L G+ VP+R IRVM+ E+ RI +H Sbjct: 61 MEERLWIQNVALVPRICVPDPPPMEETYARAVEMLGGLEVPERAQWIRVMMLEMSRIAAH 120 Query: 316 LLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRL 375 L G + +F+ DR I DL E +TG R++ + GGV D+P G+ Sbjct: 121 LFIAGGTSATTGQYSNMFWGIADRDLILDLFEELTGARIYNMFITPGGVRRDIPDGFLDR 180 Query: 376 LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR 435 L + LD++ RL Y+ N + R++G+ ++AL WG TG LRA G+ FDVR Sbjct: 181 LGQVLDFLEARLPEYDDLFFDNPVFHRRAEGIGKMTQEQALAWGVTGPNLRACGLPFDVR 240 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP--EGPFKADH 493 + PY YE DF+IP D R+ ++ E+ +S +IL Q + +P +GP + Sbjct: 241 RNDPYLVYEQLDFDIPT-ETGGDVLDRIRVRRSEIIESTKILRQVIQRLPHVKGPIRCHL 299 Query: 494 PLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSY 553 P +P +++ EA KG +Y S G T + Sbjct: 300 PNPLAW-----------------------NVPEGDAYARTEAQKGELGFYAVSTGGTKPW 336 Query: 554 RTRVRTPSFAH-LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R VR PS H +Q + G+ + D+ + + S+D +VDR Sbjct: 337 RVHVRGPSCMHAVQVLEKLCLGARIEDIAMIMFSLDACPPEVDR 380 >UniRef50_B1VSH7 NADH-quinone oxidoreductase subunit D 2 n=6 Tax=Actinomycetales RepID=NUOD2_STRGG Length = 394 Score = 345 bits (884), Expect = 4e-93, Method: Composition-based stats. Identities = 133/418 (31%), Positives = 211/418 (50%), Gaps = 29/418 (6%) Query: 183 KAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCV 242 D L+ E G M LN+GP HPS HG R+ + LDGE + Sbjct: 2 TPAADPGQGILSRMTETTIGIGGAAESTDMVLNIGPQHPSTHGVLRLRIVLDGERVQHAE 61 Query: 243 PDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVI 302 P IGY HRGAEK+ E + + I +R ++L NE+ V+AVE++ G+ VP+R Sbjct: 62 PVIGYMHRGAEKLFEARDYRQIIMLANRHDWLSAFSNELGVVMAVERMLGMEVPERAVWT 121 Query: 303 RVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIG 362 R +L+EL R+ +HL+++ ++ ++G +TPVF AF +R+++ ++E ++G RMH + R+G Sbjct: 122 RTLLAELNRVLNHLMFLGSYPLELGGITPVFHAFREREELQAVMEEVSGGRMHYMFNRVG 181 Query: 363 GVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTG 422 G+ D+P GW +R+ + + R+ YE L N I +GR++ V A +G +G Sbjct: 182 GLKEDVPAGWAGRVRDAVASVRSRMDVYENLVLGNEIFRGRTRDVGVLSAAAVHAYGVSG 241 Query: 423 AGLRATGIDFDVRKARPYSGYENF-DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCL 481 RA+G+DFD+R+ PY Y D V DC R +E+ SL + + CL Sbjct: 242 PIARASGVDFDLRRDEPYLAYGELRDTLKVVTRTEGDCLARFECLLEQTLNSLDLADACL 301 Query: 482 NNM---PEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG 538 + M GP P P ++ E G Sbjct: 302 DRMAHLAPGPINQRLPKVL-------------------------KAPEGHTYAWTENPLG 336 Query: 539 INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +N YYL S G YR ++R+ SF ++Q + + G+LV+D++ LGS+ FV+ D+D+ Sbjct: 337 VNGYYLVSKGEKTPYRLKLRSASFNNIQALTELLPGTLVADMVAILGSLFFVVGDIDK 394 >UniRef50_B3ES55 NADH-quinone oxidoreductase subunit D n=19 Tax=Bacteroidetes/Chlorobi group RepID=NUOD_AMOA5 Length = 403 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 123/405 (30%), Positives = 203/405 (50%), Gaps = 25/405 (6%) Query: 199 EWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGER 258 + + + +N+GP HP+ HG R+ + LDGE +VD VP +GY HR EK Sbjct: 17 PTKYQPTDLKVEEVLINIGPQHPATHGILRLEVILDGEIVVDVVPHLGYLHRCFEKHAAT 76 Query: 259 QSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT--VPDRVNVIRVMLSELFRINSHL 316 ++ IP+ DR++YL +E + + VE + G+T +P RV IRV+++EL R+ SH Sbjct: 77 LPYNQTIPFVDRLDYLAAMNSEHAFAMGVEHMLGLTGKLPRRVEYIRVLMAELNRLASHF 136 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 + I T+ D+GA T + DR+ I L E +G RM + IGG+ +DLP G++ Sbjct: 137 MAIGTYGIDLGAFTSFLWLMRDREYILRLFEWASGARMLYNYIWIGGLYYDLPVGFEERC 196 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 EF+ ++ +L + + NT+ R+ V A+ G +G LRA+G+ D+R+ Sbjct: 197 LEFITYLKPKLEEINQLLIDNTLFIKRTANVGVLPLATAINHGVSGPILRASGLRLDLRR 256 Query: 437 ARPYSGYENFDFEIPVGGGV----SDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD 492 YS Y F+IP+G G+ DC+ R +K +E ++S++I EQCL + + Sbjct: 257 IDGYSIYPELSFDIPIGEGLMGHVGDCWDRTWVKFQECKESIKITEQCLVRLTSDLKRTA 316 Query: 493 HPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT-SDGSTM 551 V A + + E +G ++ SD Sbjct: 317 DF------------------NPQKMVPKKVRTKAQDCYIRAENPRGELGFFFRASDNGDK 358 Query: 552 SYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 R + R+ SF++L I + +G +++DLI +GSID V+ ++DR Sbjct: 359 PIRCKARSSSFSNLSVISSIAKGQVLADLIAIIGSIDIVLGEIDR 403 >UniRef50_D1YVS8 Ech hydrogenase subunit E n=1 Tax=Methanocella paludicola SANAE RepID=D1YVS8_METPS Length = 360 Score = 343 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 101/387 (26%), Positives = 169/387 (43%), Gaps = 29/387 (7%) Query: 211 FMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDR 270 + GP HP R+ L DGE I D + GY HRG EK E ++ ++R Sbjct: 2 RTTIQFGPQHPVWIEPLRLKLTTDGELIKDVDLEAGYVHRGLEKKFE-WDYNKAAYLSER 60 Query: 271 IEYLGGCVNEMPYVLAVE-KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 + + + + L VE +AG+ +P R +IR ++ EL R++SH L I ++ +G Sbjct: 61 VCAICTQHHSTCFCLGVEGTMAGLELPRRAAIIRTIMLELERLHSHFLAIGLTLEAIGFE 120 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 F R+++ D+ E TG R+ +GGV ++ + + +F D + KR Sbjct: 121 NMFMLCFRHREQVLDVFERTTGNRVLHGINIVGGVTRNIGPEMAKEILDFCDDIEKRAHE 180 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 E+ + + +K R QGV K A E G G R + + +DVR A P+ Y Sbjct: 181 IERIIVSSYTIKQRMQGVGVMTEKMAKELGVVGPVARGSNVPYDVRHAAPHLLYREVKVT 240 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 P+ DC+ R +++V EL QS+ ++ Q + + P Sbjct: 241 -PIVEKDGDCWARSLVRVRELFQSIDLIRQLVPLLDGTP--------------------- 278 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 + MP E+ +EA +G YY+ S R +VRT ++ + I Sbjct: 279 -----DELFAKSKAMPEGENIARVEAPRGELFYYVRGKKSKELDRVKVRTSTYGNGLGIA 333 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 I+GS ++D+ + + D + DR Sbjct: 334 PLIKGSHIADVGLITITFDPCIGCFDR 360 >UniRef50_C7DI97 NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI97_9EURY Length = 387 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 113/410 (27%), Positives = 191/410 (46%), Gaps = 25/410 (6%) Query: 188 LEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGY 247 + +EN M +N+GP HPS HG R+++ +DG+ I + IG+ Sbjct: 2 EPAPRSGKALRGARTTQKSENMPVMRINVGPIHPSTHGVLRLLVDVDGDTIENMTCHIGF 61 Query: 248 HHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLS 307 HRG EK+ E + + YT++++Y+ + YV VE V + RV++ Sbjct: 62 LHRGVEKLMENRMYMQSPSYTEKLDYVAPLGWDDLYVHTVELALQKEVKETAKYARVIIM 121 Query: 308 ELFRINSHLLYISTFIQDVG-AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAH 366 E RI SHL +I D+G T +AF +R + +E I+G RM R+GG+ Sbjct: 122 EFQRIASHLFFIGALCNDIGQMFTMFMWAFRERDAVLKFLEDISGSRMFYVNMRVGGLMR 181 Query: 367 DLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR 426 LP + + +++ ++ Y+ N+I R++G+ KEA+++G +G LR Sbjct: 182 PLPDDFYDRAYKLTEYIEYKVKGYKDVIDDNSIFMERTKGIGTISKKEAIDFGLSGPNLR 241 Query: 427 ATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE 486 A+G+++DVRK PY Y+ F++P D Y R ++ EE+ +S++I+ Q L+ MP Sbjct: 242 ASGVEYDVRKEYPYYAYDRLKFKVPT-SNAGDGYARYKMRYEEIFESIKIIRQALDKMPR 300 Query: 487 GPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS 546 P+ P+ + E +G Y+ Sbjct: 301 DNDVVGLPIKLIGPEAKPDI----------------------VINHHELPRGEGIIYMVP 338 Query: 547 DGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 D YR R+R+P F L + +G+ +DL G++D VM++VDR Sbjct: 339 D-KQKPYRIRLRSPVFISLSALEHICKGAKFADLFSIAGTLDVVMAEVDR 387 >UniRef50_A4WMP9 NADH dehydrogenase (Ubiquinone) n=5 Tax=Thermoproteaceae RepID=A4WMP9_PYRAR Length = 407 Score = 342 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 111/390 (28%), Positives = 196/390 (50%), Gaps = 7/390 (1%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + + GP HPS+ G R ++++DG+ +V+ PD GY HR EK+GE + W IP Sbjct: 24 KRRILDIFWGPQHPSS-GHTRFIVEVDGDIVVNVTPDPGYVHRTMEKLGETRHWIQNIPL 82 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +R+ Y +AVE++A + V R +RV+++EL RI++HL + +G Sbjct: 83 FERLSLPDAINVTWAYAMAVERVAKLDVSPRAQYLRVIMAELSRISTHLYDLGLHAIMIG 142 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 + T + F R+ + L ++G R P W GGV P + + FLD++ K++ Sbjct: 143 SSTGFMWGFGLRELLVQLWAMVSGSRTTPTWVLPGGVRTAPPDAFYEQTKGFLDYLEKKI 202 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 + + ++N + R + V ++A TG G R +GID+D R+ Y Y+ F+ Sbjct: 203 DEFVRLVVKNPVGYYRLKDVGYLSKEDAARLMATGPGARGSGIDWDARRVYKYGIYDEFE 262 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERTLQ 506 +++ V D R M+++ E++QS +I+ Q L+ +P +GP + L PPK+R Sbjct: 263 WDVCV-EDAGDSLARTMVRICEIQQSAKIIRQALDRVPKDGPLVGEAVLHRIPPKQREKA 321 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 + + ++P E + E +G +++ DG+ YR R+ TPS+ +L+ Sbjct: 322 NEIIRLGALYT----TMLPQGEGVGVTEGGRGRYFFHVFGDGTEKPYRVRISTPSWQNLR 377 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + A G+ + DL GS + + DR Sbjct: 378 AMIRAFIGARLMDLPAIYGSFGYFPPEQDR 407 >UniRef50_Q2WAW4 Ni,Fe-hydrogenase III large subunit n=11 Tax=Alphaproteobacteria RepID=Q2WAW4_MAGSA Length = 505 Score = 340 bits (873), Expect = 7e-92, Method: Composition-based stats. Identities = 97/481 (20%), Positives = 164/481 (34%), Gaps = 53/481 (11%) Query: 116 NDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG-HPLRKDYPARAT 174 +D + P ER D++G+T G + R + W PL A + Sbjct: 76 DDRRFLALGNVRPGVIRIERAIHDVWGLTPVGLEDRRHWLDHGRWPSRMPLAAQPMAPSA 135 Query: 175 EFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLD 234 E + +A D + +GP H Sbjct: 136 EPDRYPFLQAVGD----------------------GLHQIPVGPVHAGVIEPGHFRFHCQ 173 Query: 235 GEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT 294 GE +V +GY H+G E + + R+ + + AVE G Sbjct: 174 GEAVVRLEQRLGYQHKGIEGLLQGAPLDKAARIVARVSGDSTVAYSLAFARAVEAATGCE 233 Query: 295 VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRM 354 VP R + +R +++E+ R+ +H+ I D + R+K+ + + G R+ Sbjct: 234 VPARAHWLRGVMAEMERVANHVFDIGAVCNDAAFAVMLSHMGVLREKVLRANDVLFGHRL 293 Query: 355 HPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKE 414 + GGV+ DL L+ L K L + L R+ Sbjct: 294 NMDRIVPGGVSLDLSDEGVEALKHLLYGFGKLLEQGYQLYENTPSLSDRTVSTGIVQTSL 353 Query: 415 ALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSL 474 +G G RA+G D R+ Y Y+ D +PV D RV+++ E ++SL Sbjct: 354 IHRFGAGGFVGRASGRGHDARETPSYPPYDKLDMTVPVLTE-GDVNARVLVRFAEAKESL 412 Query: 475 RILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIE 534 ++ + L+ MPEG + P A E + E Sbjct: 413 HLINRMLHEMPEGAVRVPLPEV-----------------------------AGEGMGVAE 443 Query: 535 ATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 + +G +L + R PS+ + AAI G++V+D + S + S Sbjct: 444 SFRGEVVVWLRLGADHVVERCHPHDPSWFQWPLLEAAIEGNIVADFPLCNKSFNCSYSGH 503 Query: 595 D 595 D Sbjct: 504 D 504 >UniRef50_D2L9H0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9H0_9DELT Length = 494 Score = 340 bits (872), Expect = 9e-92, Method: Composition-based stats. Identities = 98/494 (19%), Positives = 170/494 (34%), Gaps = 58/494 (11%) Query: 102 DRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK 161 D + + + P+ T P +W+ERE ++ +GI DGHP L+ I Sbjct: 58 DHDGRLAFCRTAPLD--RYPSLTPDCPQCHWFERELYEQWGILPDGHPWLKPI------- 108 Query: 162 GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHP 221 E+ + +GP H Sbjct: 109 ----------------------RFTTPPGAGRPRPAPGVTDYFQVRGEEVHEVAVGPVHA 146 Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEM 281 Q GEE+ +G+ HRG E M + + + + + Sbjct: 147 GIIEPGHFRFQCFGEEVFHLEISLGFQHRGIEAMLAGGPDPRTVHFMETAAGDTSIGHSL 206 Query: 282 PYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQK 341 + +E L+G T P R I EL R+ +H + DVG + + + R Sbjct: 207 AHAAVIEALSGRTAPPRGRAIGRAALELERLANHTGDLGALAGDVGFLPTLSYCGRIRGD 266 Query: 342 IYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILK 401 ++ + G R R GG A D+ G R+L L+ + + ++ + Sbjct: 267 FLNMTALLCGNRFGRGLVRPGGTAFDVDTGLLRVLAGRLEAARRAAFGAAELLFASSTVL 326 Query: 402 GRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYT 461 R +G A++AL+ G G RA G+ D R+ P G D + + D Y Sbjct: 327 ARFEGTGKLTAEKALDLGLVGPPARACGLARDARRTFPQPGAGARDIALSL-HDFGDVYA 385 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWG 521 R +++ E+ SL L+ L ++P+GP + P G Sbjct: 386 RGLVRRLEMEASLDFLDGLLADLPDGPTRELLP--------------------------G 419 Query: 522 PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLI 581 + P + +IE +G + + ++ PSF + + A+RG +SD Sbjct: 420 RLPPGRLAVGLIEGWRGEIRHVAVTGPDGRFLAYKIIDPSFHNWFGLAQALRGQQISDFP 479 Query: 582 VYLGSIDFVMSDVD 595 + S + D Sbjct: 480 LCNKSFNLSYCGHD 493 >UniRef50_D2LH96 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LH96_RHOVA Length = 504 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 100/495 (20%), Positives = 167/495 (33%), Gaps = 61/495 (12%) Query: 101 IDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW 160 D + V+L+ P+ P A ER DL+G DG P+ RR + W Sbjct: 70 WDAQENCRAIVSLSLKAGAYPSVGLHHPPALRLERAMRDLYGAIPDGIPDERRWLDHGVW 129 Query: 161 KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNH 220 G + E E + +GP H Sbjct: 130 PG--------------------------------REHEPGYHFLPVEGNGLHQIPVGPVH 157 Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 +GE + +GY H+G E + + S R+ Sbjct: 158 AGIIEPGHFRFTANGETVARLEARLGYVHKGVEALAQGASIEKAAKLAARMSGDSTVAYS 217 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQ 340 + AVE G +P R ++R +++EL R++ H+ + D + R+ Sbjct: 218 FAFSRAVEAALGWEIPPRAQILRGVMAELERLSHHVSDVGGICNDAAVAVLLARCSLIRE 277 Query: 341 KIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTIL 400 I A+ G RM GGVA D+ + L+ + +A Q+ + Sbjct: 278 DILRTQAALFGHRMMMDAIVPGGVARDIDAAGATAILALLERIEIGFHRVVRAYDQSPSI 337 Query: 401 KGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCY 460 + R+ G ++ G RA G FD R + PY Y F++P SD Sbjct: 338 QNRTHGTGIVQLDFIRQFAAGGFVGRAGGRAFDARASFPYPPYNAVAFKVPT-REESDVD 396 Query: 461 TRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSW 520 R+ +++EE+ +S I+ Q L + +GP A P P Sbjct: 397 ARIWIRIEEIAESAGIIRQLLAKLEDGPIHAAPPPFQP---------------------- 434 Query: 521 GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDL 580 ++EA +G + + + R S+ + AI G++V+D Sbjct: 435 ------GAGAALVEAFRGDLFLAVRIEDESRIAHMHARDASWFQWPLLETAIDGNIVADF 488 Query: 581 IVYLGSIDFVMSDVD 595 + S + S VD Sbjct: 489 PLCNKSFNCSYSGVD 503 >UniRef50_C1XWY7 Ni,Fe-hydrogenase III large subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY7_9DEIN Length = 426 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 104/481 (21%), Positives = 178/481 (37%), Gaps = 57/481 (11%) Query: 115 ENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARAT 174 E P+ + FP +W+ERE W+ G+ +GHP+L+ + Sbjct: 2 EAQGSFPSLAEEFPALDWFERELWEDHGLVPEGHPSLKPLRNH----------------- 44 Query: 175 EFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLD 234 + K E + +GP H + Sbjct: 45 -----------HSVYSRQAVPKGIVRLPYPFDRVEGLHEVPVGPVHAGIIEPGHFRFSVL 93 Query: 235 GEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIT 294 GE I+ +GY HRG E++ + +S + +R + + + AVE G+ Sbjct: 94 GERILHLEVRLGYQHRGVEQLFQGKSLEQALLLAER-AGGEPVAHALAFCQAVEAALGVE 152 Query: 295 VPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRM 354 VP R +R +L EL R+ HL +++ D+G R + +E +TG R Sbjct: 153 VPPRAYRLRRVLLELERLFGHLGHLAGLFTDIGYAYAATQVGKVRALLQGQLERLTGHRY 212 Query: 355 HPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKE 414 +GGV D+ +R L + ++ AAL++ ++ R + V + Sbjct: 213 GRNALTVGGVGFDIDPETQVEVRGALAKLAAEAETHLAAALKHPMVLDRLRYVGTLTQAQ 272 Query: 415 ALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSL 474 A G G RA G+ D+R+ + Y+ F PV D R + EELRQ Sbjct: 273 ARWLGLVGPAARACGLGRDLRQDD--ALYQTF---TPVVRSGGDVLARAQVYAEELRQGF 327 Query: 475 RILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIE 534 L++ L +P+G PV E++ +E Sbjct: 328 VYLDRFLGALPQGEVANGPTTPRV----------------------DPVPATAEAYSRVE 365 Query: 535 ATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 A +G Y++ G+ R ++ PSF + + + A+RG + D + S D + Sbjct: 366 AGRGELFYWVRLRGN-RVERVKIVDPSFKNWRALELAVRGMGLPDFPIINKSFDLSYAGC 424 Query: 595 D 595 D Sbjct: 425 D 425 >UniRef50_A1KEQ8 Possible formate hydrogenase hycQ (FHL) n=14 Tax=Actinomycetales RepID=A1KEQ8_MYCBP Length = 492 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 101/508 (19%), Positives = 177/508 (34%), Gaps = 54/508 (10%) Query: 88 PAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDG 147 V Y ++ +R + L+ + ++ + + L A +ERE DL+GI G Sbjct: 38 DGDSLRVVYLFLAGYPDRRVELEYVVPADNPEIRSLAYLSFPAGRFEREMADLYGIRPVG 97 Query: 148 HPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTE 207 HP RR++ W + A F E Sbjct: 98 HPKPRRLVRHAHWPDWH-------------------PMRTDAGPAPEFTDTGAFPFLAVE 138 Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 + +GP H + GE IV + + HRG EK+ + + + Sbjct: 139 GPGVYEIPVGPVHAGLIEPGHFRFSVAGETIVRLKARLWFVHRGIEKLFHGRPATAAVDL 198 Query: 268 TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVG 327 +RI + + + LA+E GI +P ++ +R ++ EL R+ +H + DVG Sbjct: 199 AERISGDTSAAHALAHSLAIEDALGIELPHEIHRLRALIVELERLYNHAADLGALANDVG 258 Query: 328 AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL 387 A R+ + A+TG R+ R GGVA D L + L Sbjct: 259 YSLANAHAQRIRENLLRRNAAVTGHRLLRGAIRAGGVALRALPDTDE-----LAALAVDL 313 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 A L N+++ R G A +A G G RA+G+ D R P + Sbjct: 314 AEVATLTLANSVVYDRFAGTAVLHPDDASALGCLGYVARASGLRSDARVEHPTIVLPITE 373 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 +G D R ++ +E S + + + + GP + Sbjct: 374 ----IGAPDGDVLARYTVRRDEFAASAALAQHIVESHT-GPIE----------------- 411 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 + PV + ++E +G + + D R +V PS+ + Sbjct: 412 --------YAATLHPVGAPSSGIGIVEGWRGTIVHRVEIDVDGRITRAKVVDPSWFNWPA 463 Query: 568 IPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +P A+ ++V D + S + + D Sbjct: 464 LPVAMADTIVPDFPLANKSFNQSYAGND 491 >UniRef50_A6DAC0 Carbon monoxide-induced hydrogenase, large subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC0_9PROT Length = 358 Score = 337 bits (865), Expect = 6e-91, Method: Composition-based stats. Identities = 99/385 (25%), Positives = 180/385 (46%), Gaps = 30/385 (7%) Query: 213 FLNLGPNHPSAHGAFRIVLQLDG-EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 +N+GP S L +D E + D G+ HRG E + ++++ + T+R+ Sbjct: 3 KINIGPFLASLEEPIYFKLDVDDNEIVRDVEIVNGFVHRGLEALTMQKNFFQNLILTERL 62 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 L + Y LA+EK+A I V R + +RV+ E+ RI S++ +S V Sbjct: 63 CALCSNNHPFSYCLALEKIAEIEVSKRADYLRVIADEVKRIASNMFNLSMLAHLVHDYEL 122 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + R+ + D+ E I G RM + IGGV ++L + + L+ + + Sbjct: 123 MRDTMDTREIMQDVKETIWGNRMDLSAVTIGGVKYNLDKQKSEFILNSLEKIEPLVDKLF 182 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + + +K ++G+ ++ALE+G +G R +GI+ DVR PY+ Y+ + + Sbjct: 183 ERFCNSEKIKK-TKGIGVLTKQQALEFGVSGPVARGSGINNDVRVKAPYAAYDELEVRVD 241 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 + D Y+R+ ++ +++ +++IL+ +NN+P GP + Sbjct: 242 L-ESDGDVYSRMKVRWYDIKNAIKILKNAINNLPSGPIHLE------------------- 281 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 P +PA E+ EA +G YY+ +DG R R R P++ + Q + Sbjct: 282 --------KRPHIPAGEATVRTEAPRGELIYYVKTDGGQKPKRMRWRVPTYMNFQALEEM 333 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 I+G+ SD+++ L SID +S DR Sbjct: 334 IKGNRASDVVLILNSIDPCVSCTDR 358 >UniRef50_A9A347 NADH dehydrogenase (Quinone) n=3 Tax=Thaumarchaeota RepID=A9A347_NITMS Length = 378 Score = 337 bits (865), Expect = 7e-91, Method: Composition-based stats. Identities = 120/399 (30%), Positives = 194/399 (48%), Gaps = 25/399 (6%) Query: 198 EEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGE 257 G+ +E M LN+GP HP + G RIV+Q+DG+ IV C PD GY HRG EKM E Sbjct: 5 MPPGLALKKVDERIMTLNVGPQHPGS-GHMRIVVQIDGDYIVACDPDPGYVHRGEEKMAE 63 Query: 258 RQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLL 317 +++ + +P+ +R C PYVL E++ GI VP+R +RV+ SEL R + Sbjct: 64 YRNYITNVPHLERPVIHDSCNVLYPYVLGAEEILGIEVPERAKYVRVICSELNRCIYTMY 123 Query: 318 YISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLR 377 +++ + +G T + DR+ + DL+E ++G R+ A F GGV +DLP ++ + Sbjct: 124 WLAIYGIFLGHSTMFMWPAGDRELLIDLMEKVSGARVTHAHFIPGGVRNDLPANFEDVCL 183 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 +++ KR+ Y N IL R+Q + A+ +GTTG+ LRA+G+D+D+R Sbjct: 184 RQVNYFEKRIKEYAAVFYDNPILISRTQDTGVLSRENAIRYGTTGSVLRASGVDYDLRVK 243 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 PY Y+ D V D Y R + ++ +S I+ Q L MP+ Sbjct: 244 APYDVYDELDVHTNVLKE-GDSYARSKVPWLDMMESCNIIRQALQKMPKSGSVRTKLKPN 302 Query: 498 PPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV 557 P K ++ +E+ +G Y+ SDG T YR ++ Sbjct: 303 PKTK-----------------------GPATVYKRVESGRGSLGCYIVSDGKTEPYRVKM 339 Query: 558 RTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 PSF +L +P + G + ++ S+++ + DR Sbjct: 340 SVPSFRNLLAMPNLLIGEKLGNMPSVYWSLNYWPVEADR 378 >UniRef50_B3TC54 Putative Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC54_9ZZZZ Length = 363 Score = 337 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 122/390 (31%), Positives = 189/390 (48%), Gaps = 31/390 (7%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E + LN GP HP G FR+++ +DG+ V P IGY HRG EK+ E + + IP Sbjct: 3 EGLVTLNWGPQHP-VTGHFRMIMTIDGDLCVGAEPTIGYTHRGIEKLLENRQFLVGIPMI 61 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +R + Y AVE L P R +R ++SE+ R++SHL ++ + +G Sbjct: 62 ERFNMTDTAPMSLSYTKAVESLMDFEAPPRAQYLRTIISEICRLSSHLYNLALYTVALGM 121 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR-L 387 TP +A DR+ L E ++G R+ + GGV D+P + + + + R L Sbjct: 122 YTPFMWAIGDREHFLKLGEILSGVRLAYNYPIPGGVYKDMPPDFPHQATKTIKYFRNRLL 181 Query: 388 ASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 Y+K T +K R + V +EAL+WG TG LRA+G+ D+RK PY Y D Sbjct: 182 KDYKKFIYDTTAVKSRGEDVGIMSKEEALKWGVTGPVLRASGVKKDMRKVEPYGAYNEVD 241 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F++ + D + R++++ EE+ QSL ILEQC+ ++P G + Sbjct: 242 FDV-ITKNEGDSHARMLVRYEEMEQSLNILEQCIKDIPAGDYFTKVR------------- 287 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS-TMSYRTRVRTPSFAHLQ 566 P +PA E+F +EA +G YL + + M YRT+ PSF + Sbjct: 288 --------------PAVPAGETFTRVEAARGEVGVYLFNKETRNMPYRTKFSNPSFKNGY 333 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +P GS+++D SID ++DR Sbjct: 334 VLPKLFVGSVIADCAAIYHSIDVWALEMDR 363 >UniRef50_C7I0C0 NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Thiomonas intermedia K12 RepID=C7I0C0_THIIN Length = 532 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 102/486 (20%), Positives = 177/486 (36%), Gaps = 46/486 (9%) Query: 112 ALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPA 171 + D +P+ P WYERE DL+G+ F+GHP +++ + P Sbjct: 92 RVRPEDRTLPSLANKLPLLGWYEREMMDLYGLRFEGHPEPNPLVLHEGEPRDP------- 144 Query: 172 RATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVL 231 A + + D L GP + + + Sbjct: 145 ---------APLASGFDPAAPARDYAPLPPIVPQVQGPDIQRLPFGPVRADIVESAQFLF 195 Query: 232 QLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLA 291 GE I+ P + Y HR E + + + +R+ + + + + AVE Sbjct: 196 FYIGEGILHYHPRLFYKHRAMEGRFQGATLATGAVLAERVSGIDSVAHALAFAQAVEGAM 255 Query: 292 GITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITG 351 G P R +RV+L+EL R+ +HL Y+ + +++ + +TG Sbjct: 256 GWRAPPRARYLRVVLAELERLYNHLHYLGHLSKTTTLKVGEAEGHLLEERVKQINGRLTG 315 Query: 352 FRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYG 411 R GG+ DL L + LD + + Y + R Sbjct: 316 SRFLRGLITPGGLRRDLD---ITGLDKALDSVNDEIDRYLQRLENTRSHLDRLMTTGRLE 372 Query: 412 AKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELR 471 + A + G G RA+ +D D+R+ PY+ YE F +PV D + R M+++EE+R Sbjct: 373 RQVAFDQGACGPIERASNLDRDLRRDHPYANYEKVRFSVPV-QQGGDAHARSMVRMEEIR 431 Query: 472 QSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQ 531 +SL I+ Q + G + P E Sbjct: 432 ESLAIIRQTIGRTKPGEVLRFDVM-------------------------EDADPQGEGLG 466 Query: 532 MIEATKGINSYYLT-SDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFV 590 +EAT+G Y + S+ T R +++ PSF++ + P + S + D + S Sbjct: 467 WVEATRGGLLYAVHLSEDRTRLQRVKIKEPSFSNWRVFPFTVEDSNMMDYAINEASFGLS 526 Query: 591 MSDVDR 596 ++ DR Sbjct: 527 IAGADR 532 >UniRef50_B9L8U2 Ech Hydrogenase, Subunit n=3 Tax=Epsilonproteobacteria RepID=B9L8U2_NAUPA Length = 361 Score = 332 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 90/390 (23%), Positives = 159/390 (40%), Gaps = 30/390 (7%) Query: 208 NEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQ-SWHSYIP 266 + + + G H + + + E I D +IGY HRG EK + + Sbjct: 1 MGNKIIVPFGSQHVALPEPVSFLFETQNEVITDVTVNIGYVHRGIEKAAITRFEYTQLPY 60 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 R+ L + Y +EKL GI +++ +R+++ EL RI+SH+L + V Sbjct: 61 LVARVCGLCSITHAGAYTHGIEKLLGIETNKKIDYLRMLVVELDRIHSHMLANGHVAEVV 120 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 G F R+ + D++E ITG R+ + IGGVA D + + RE L + Sbjct: 121 GYENLFMQTFRYREDVMDILERITGNRVQYDYQIIGGVARDFDKETEDFAREKLLTLKAN 180 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + + +++GV + A ++ G RA+G++ D R Y +E Sbjct: 181 TEKLIEFFENDYTFALKTKGVGTISKEMAEKFNAAGPIARASGLETDARAEYDYLPFEEV 240 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 +++ D + R M++ +E+ S+ + L+ +PEG + Sbjct: 241 GYKLQT-RTEGDVWARNMVRFDEIMNSIEMCLNILDGIPEGEHRVKVKGR---------- 289 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ 566 P E+F +EA +G YYL + + + R R+R P++A++ Sbjct: 290 ------------------PDGETFVRVEAPRGECFYYLKGNKTKVLERVRIRVPTYANIP 331 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G SD + S D MS R Sbjct: 332 VLKELFVGEKYSDAQAIVLSFDPCMSCTAR 361 >UniRef50_Q3JMD7 Hydrogenase subunit n=33 Tax=Burkholderia RepID=Q3JMD7_BURP1 Length = 567 Score = 331 bits (848), Expect = 6e-89, Method: Composition-based stats. Identities = 94/482 (19%), Positives = 163/482 (33%), Gaps = 22/482 (4%) Query: 116 NDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWK--GHPLRKDYPARA 173 P + +F +A +R DL G+ G + R + W HPLR+ Sbjct: 105 EAGSYPDLSAIFASATRMQRALHDLVGLRARGAHDTRPWLAHGAWPRDYHPLRR------ 158 Query: 174 TEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQL 233 + + +GP H + Sbjct: 159 -------------RATGGERFEYATADYPFVPVAGDGVHEIAVGPIHAGVIEPGHFRFSV 205 Query: 234 DGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGI 293 GE+++ +GY HRG E++ ER + RI Y +A+E+ I Sbjct: 206 VGEKVLRLEERLGYAHRGVERLFERADALAGSRLAARIAGDSTVAFAWAYCMALEQALRI 265 Query: 294 TVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFR 353 VPDR +R +L E R+ +HL + D G + ++ + + I G R Sbjct: 266 RVPDRALRLRALLLERERVANHLGDLGALGNDAGFAVGLAHFSRLKEDWLRMQDRIFGHR 325 Query: 354 MHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAK 413 GGVA D+ + D + + + + + + L+ R G A+ Sbjct: 326 YLMDAIVPGGVARDIAADDAAAIVAQCDRIEREVRAMQTIYDDQSGLQDRFAGTGRLDAQ 385 Query: 414 EALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQS 473 +G G RA+G DVR + Y+ ++ D RV ++ E +S Sbjct: 386 AVAHFGVCGLAARASGQPRDVRADHRLAPYDALRIDVSR-DARGDVAARVAVRFAETYES 444 Query: 474 LRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMI 533 +R + L ++P+ A+ P R ++ P I Sbjct: 445 MRAIRALLADLPDDGLAAEIAPGATVPGARADAGGACEGEEGGDAAFCPGDARRRGIGWI 504 Query: 534 EATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSD 593 E +G L D R PS+ + + AI G++V+D + S + + Sbjct: 505 EGWRGPVFVALELDARGAVARCHCHDPSWHNWPALEHAIIGNIVADFPLINKSFNLNYAG 564 Query: 594 VD 595 D Sbjct: 565 HD 566 >UniRef50_B1YB08 NADH dehydrogenase (Quinone) n=5 Tax=Thermoproteaceae RepID=B1YB08_THENV Length = 407 Score = 330 bits (847), Expect = 7e-89, Method: Composition-based stats. Identities = 114/383 (29%), Positives = 178/383 (46%), Gaps = 8/383 (2%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + +GP HP + G R+ + LDG+ I + VPD G+ HRG EK+ E + + + IP ++ Sbjct: 33 VVVGPQHPGS-GHMRLFVVLDGDIIKEVVPDPGFVHRGVEKLAENRPYWTLIPLVEKASI 91 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + +P LA+EK G+ P R +R ++EL RI +HL ++ +G T Sbjct: 92 MDSMNITLPITLALEKALGLEPPPRAKYLRTAMAELSRIRTHLYDLALLGIFLGHSTAFM 151 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + F ++ ITG R A+ GGV D+ R + + L ++L ++ Sbjct: 152 WGFALMDLYAEVFAKITGARTTVAYPVPGGVRRDVKREHIEAVEKLLRKTEEKLRDFKTV 211 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVG 453 L N + K R +GV AK A E G G RA GID DVRKA PY Y DFE+ V Sbjct: 212 FLDNPVTKARLEGVGVVDAKRAAELGVVGPFARAAGIDHDVRKAAPYDAYPELDFEV-VT 270 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 D RV+++ E+ S+ I+ Q L N+PEG L P R + Sbjct: 271 EKAGDAMARVLVRWREMYVSMDIVRQALKNLPEGDVIDQALLFKNPEYRREGMGGVLGVY 330 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 ++ G E+ + +L + G+ YR R TPS+ +L+ + A+R Sbjct: 331 TYMYPEPGEYAAVAEAARG------ATYIHLWTTGTQRVYRMRYVTPSWRNLKAMAEAMR 384 Query: 574 GSLVSDLIVYLGSIDFVMSDVDR 596 G ++D+ S + + DR Sbjct: 385 GERLADMPAVYMSFGYFPPEADR 407 >UniRef50_C6HVM5 Putative hydrogenase-3 subunit (HycE) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVM5_9BACT Length = 512 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 89/489 (18%), Positives = 170/489 (34%), Gaps = 48/489 (9%) Query: 107 IMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLR 166 ++L ++L ++ + P+ + +FP A +ER DLFG+ DG +LR + W PL Sbjct: 71 VLLSLSLPKDAVSFPSLSSIFPPAARFERTIHDLFGLIPDGLADLRPWIDHGLWSHPPLS 130 Query: 167 KDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGA 226 + + + +GP H Sbjct: 131 HTPSPLTRLAQGMDYP--------------------FVRVRGDGVHEIPVGPVHAGIIEP 170 Query: 227 FRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLA 286 + GE+++ +GY H+G ++ ++ RI + + A Sbjct: 171 GHFRFSVVGEKVLRLETRMGYTHKGIARLFRGRNLPEAARLASRISGDSAVATSLAFSKA 230 Query: 287 VEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLV 346 VE+ I + + V +R +L E RI +HL + D G + R+ ++ + Sbjct: 231 VEEALDIEISEGVRFVRAILLERERIANHLADLGALGNDAGLAVALSLFHPLREAMHRIN 290 Query: 347 EAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQG 406 ++ G R+ GGV+ L L + + ++ E+ + L+ R Q Sbjct: 291 LSLFGHRLLFDSVVPGGVSTGLSGAMIETLLLENERLQAEVSLLERIYADHGGLQDRFQN 350 Query: 407 VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLK 466 + A G G RA+G +D+R F + + + D +RV ++ Sbjct: 351 TGILSPEVAGRLGIGGVAGRASGQGWDLRVDHREDPVHRFAPALALDH-IGDVASRVRIR 409 Query: 467 VEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPA 526 E+ +SLR+ L + P A P P Sbjct: 410 FFEIFESLRLTHALLTSFPGPDICATIPDPPAP--------------------------- 442 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 E ++E +G ++ + + S + A++ G+LV+D + S Sbjct: 443 REGAGIVEGFRGEVLGWVRILPGKILADAHIADGSPLLWHALEASVPGNLVADFPLINKS 502 Query: 587 IDFVMSDVD 595 + S D Sbjct: 503 FNPSYSASD 511 >UniRef50_A4XCQ7 NADH-quinone oxidoreductase subunit D 2 n=22 Tax=Actinomycetales RepID=NUOD2_SALTO Length = 388 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 129/387 (33%), Positives = 210/387 (54%), Gaps = 28/387 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 M LN+GP HPS HG R+ L LDGE +V P +GY HRGAEK+ E + + I +R Sbjct: 28 MVLNIGPQHPSTHGVLRLRLVLDGERVVSAEPVVGYMHRGAEKLFEVRDYRQIIVLANRH 87 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 ++L NE+ VLAVE+L G+ VP+R +R+ L+EL R+ +HL+++ ++ ++GA+TP Sbjct: 88 DWLSAFANELGVVLAVERLLGMEVPERATWLRMALAELNRVLNHLMFLGSYPLEIGAITP 147 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 +F+AF +R+ + +E ++G R+H + R+GG+ ++P GW R + + + L + Sbjct: 148 MFYAFRERETLQTALEEVSGGRIHYMFNRVGGLKEEVPAGWTGRARAAIGEVRRSLPDLD 207 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 +N I R+ GV A +A +G +G RA+G+D D+R+ PY Y+ D + Sbjct: 208 NLIRRNEIFLARTVGVGVLSAAQAAAYGASGPVARASGLDLDLRRDEPYLAYDQLDVPV- 266 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE--GPFKADHPLTTPPPKERTLQHIE 509 V DC++R + ++++ SL + EQCL+ + GP P Sbjct: 267 VTRTAGDCHSRFEVLLDQVYVSLDLAEQCLDRVDRLTGPINTRLPKVL------------ 314 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 P ++ E GIN YYL S G +R ++RT S+A++Q + Sbjct: 315 -------------KAPEGHTYAWTENPLGINGYYLVSRGEKTPWRLKLRTASYANVQALA 361 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + G LV DL+ LGS+ FV+ D+D+ Sbjct: 362 TLLPGCLVPDLVAILGSMFFVVGDIDK 388 >UniRef50_A9BJL6 NADH dehydrogenase (Quinone) n=3 Tax=Thermotogaceae RepID=A9BJL6_PETMO Length = 369 Score = 327 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 121/390 (31%), Positives = 191/390 (48%), Gaps = 23/390 (5%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 + L LGPNHP HG F + + +DG+ IV P G HRG EK+ ER+ W + + Sbjct: 1 MKELKLYLGPNHPGMHGNFSVHMYVDGDTIVRARPMPGMLHRGFEKLMERRLWMNNLALI 60 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 RI +NEM Y +A+E+L GI VP++ + IR+++ EL RI +HL+ + VG Sbjct: 61 PRICVPEPDINEMVYAMAIEELTGIEVPEKAHWIRMIILELARIANHLMSLGGIGGPVGL 120 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T + DR I D+ E ITG R++ + GGV DL ++ FLD++ RL Sbjct: 121 YTGPNWGLADRDLILDIFEEITGARIYHMYIVPGGVRKDLREETIEKIKSFLDYLENRLP 180 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR-ATGIDFDVRKARPYSGYENFD 447 YE L+N++ + R++ A+ E G TG G+R A G +D+RK PY+ Y+ + Sbjct: 181 EYEDLILKNSLFQRRTKDKLLLPAEVVWELGVTGIGMRSAVGEAYDIRKVDPYARYDQVE 240 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F +P SD YTRV K E QS++I+ Q L MP+ + + Sbjct: 241 FYVPTA-NYSDGYTRVYFKYLETYQSIKIIRQVLEKMPQKGKVWNKISNGSALR------ 293 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH-LQ 566 +P + + +E +G YY+ S+G YR VR S+ L Sbjct: 294 --------------WRVPKGQVYTHVECARGEYGYYMVSEGEDKPYRVAVRGASYPQGLL 339 Query: 567 QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 + + G+ + D +++ ++ ++DR Sbjct: 340 GVEKYLPGTRIEDAALWMDTMGVCPPEIDR 369 >UniRef50_C7LSU9 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LSU9_DESBD Length = 493 Score = 323 bits (829), Expect = 9e-87, Method: Composition-based stats. Identities = 94/510 (18%), Positives = 164/510 (32%), Gaps = 65/510 (12%) Query: 86 GLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITF 145 G+P D ++ ++++D + + P+ T P A+ +ERE W+ G+ Sbjct: 48 GVPDHDGTILVAVLALDSESILGV-ARSEPISGSYPSLTPKHPQAHLFEREVWEQHGLVP 106 Query: 146 DGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRG 205 GHP + Sbjct: 107 VGHP------------------------------------WLKPVRHTFENAPANAPFFR 130 Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 E + + +GP H Q GEE++ +GY HRG E + + + Sbjct: 131 VEGGEVHEVAVGPVHAGVIEPGHFRFQCAGEEVLHLEIALGYQHRGIEDALQNGPHPATM 190 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 + + + + +E L G+ P R +R M EL R+ +H + D Sbjct: 191 NQIETVAGDTTIAHATAHASVLEALGGVETPLRAQWLRAMALELERLANHTGDMGALAMD 250 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 V + R +L + G R R GG HDL + L E L Sbjct: 251 VAFLPTSAACGKIRGDFLNLTALLCGNRFGRGLIRPGGCRHDLEEERLKTLTERLKAHMA 310 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 + ++ R + V +A + G G RA G+ DVR P +G+ Sbjct: 311 DVEQAMAWFWDAASVRVRFRNVGVVHPSQATDIGLVGPAARACGLVRDVRFDHP-AGWHR 369 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTL 505 F D + R ++ E+++S R L L +G A P Sbjct: 370 FSHSPVAVWPSGDIFARARVRSLEIQRSGRYLFDQLAAPVDGDITAALPAPQ-------- 421 Query: 506 QHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 P + + ++E +G + +D ++ PSF + Sbjct: 422 -------------------PESLAVALVEGWRGEVCHVALTDYFGRFRSYKITDPSFHNW 462 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 + ++RG+ VSD + S + D Sbjct: 463 TGLALSLRGTAVSDFPICNKSFNLSYCGFD 492 >UniRef50_Q58433 Uncharacterized protein MJ1027 n=12 Tax=Methanococcales RepID=Y1027_METJA Length = 377 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 91/394 (23%), Positives = 164/394 (41%), Gaps = 28/394 (7%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + + +GP HP+ R+ L ++ E I + IG ++RG E + E Sbjct: 1 MLFMKYEGEIAIGPVHPTMLEPHRLRLFIEDEIIKEAELVIGVNYRGIELIMEGLPPEKI 60 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 +++I + ++ V E+ I VP+R IR ++ EL R++SH+L + Sbjct: 61 SILSEKICGICSHIHVWCNVTVTERGCDIEVPERAEYIRAIVEELERLHSHMLLFGHAFE 120 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV--AHDLPRGWDRLLREFLDW 382 +G T F AF R+ I ++ ITG R + IGG+ ++ L E L+ Sbjct: 121 VLGFETMAFRAFMIREPIMQILGEITGGRAQYSCPIIGGIRPRCNIKESKIPALLERLEK 180 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSG 442 + L + + + ++ R + V K A + G R +GI D+RK Sbjct: 181 FEENLKKLLERTVNDPMIMSRIKDVGVLDKKTAKKLHALGPTARGSGIHSDMRKMGQVPV 240 Query: 443 YENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE 502 Y+NF+FE V D ++R+ ++ E +S++I+ Q L ++P + +P + Sbjct: 241 YDNFEFEEIVFDD-GDVFSRLAVRFYECFESVKIIRQGLKDLPNLDKRIYNPNYELKEFK 299 Query: 503 RTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSF 562 + EA +G Y D + + ++RTP+ Sbjct: 300 PIDVYN-------------------------EAQRGQVYYSYGLDENGRVRQVKIRTPTA 334 Query: 563 AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +L + A + G VSD + + S D + DR Sbjct: 335 TNLACMEAILPGHHVSDAELIIASCDPCFTCTDR 368 >UniRef50_A0LSU1 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU1_ACIC1 Length = 499 Score = 322 bits (824), Expect = 4e-86, Method: Composition-based stats. Identities = 101/486 (20%), Positives = 168/486 (34%), Gaps = 42/486 (8%) Query: 109 LKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKD 168 + VA+ P + + P A+WYER+ DLFG+ GHP L +++P Sbjct: 54 IDVAVPRGSTSYPALSAVVPAASWYERKIHDLFGLEPLGHPRLDPLILP----------- 102 Query: 169 YPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFR 228 + P+E + + GP + + Sbjct: 103 --------LREAQPRPLPGQRSAIPPLTPDEAAIPSRVLGHGVFTIPHGPVRSGVYESVE 154 Query: 229 IVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVE 288 +++ GE+I + HRG E+ E + +R+E + + + + AVE Sbjct: 155 YLVETPGEDIPYVGIRVFAKHRGIERRFEDLDVSDGVLLAERVEGIASVAHALAFCHAVE 214 Query: 289 KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEA 348 LAG+ R +RV+ +EL RI +HL G V +++I L+ A Sbjct: 215 DLAGVIPSPRDRSVRVIFAELERIANHLDVALKLADAAGLAVAVSRFGYHKERILRLIGA 274 Query: 349 ITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVA 408 G R GG+ + + LL D + + A +Q R +G Sbjct: 275 ACGSRFGRGVVVPGGIGCEPAISPNALLTRLDDILREVFAD-ADLLMQTPSFLDRLRGTG 333 Query: 409 AYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVE 468 A G G RA+G D D R RPY Y + V G D R+ ++ Sbjct: 334 PLDPALARRHGALGPIGRASGFDDDDRWHRPYDEYSDLPQFPAVSSGSGDALARLEIRWS 393 Query: 469 ELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 528 E+R S ++ Q + ++ P P +R + Sbjct: 394 EIRSSAELIRQAVAHIAALSAPTAEPADVPAAIDRI---------------------SGR 432 Query: 529 SFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSID 588 EA +G Y + D R R+ SF +L G +++D S Sbjct: 433 GIGWAEAPQGEVVYVVECD-DGRISRCAPRSASFHNLVLFHDVFAGDILTDFPFIEASFG 491 Query: 589 FVMSDV 594 ++ V Sbjct: 492 LSIAGV 497 >UniRef50_D1LDT9 NADH dehydrogenase subunit 7 (Fragment) n=2 Tax=Euplotidae RepID=D1LDT9_EUPCR Length = 462 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 131/418 (31%), Positives = 204/418 (48%), Gaps = 17/418 (4%) Query: 195 FKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEK 254 + E +N GP HP++HG R VLQL+GE I +IG+ HRG EK Sbjct: 45 WTHNNSSKLNKLEQTQTFMMNFGPQHPASHGVLRFVLQLEGEYIRHADANIGFLHRGTEK 104 Query: 255 MGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGI-TVPDRVNVIRVMLSELFRIN 313 + E++++ +PY DR++Y+ E Y LA+E L G T +R + EL R+ Sbjct: 105 LIEQRTYLKSLPYFDRLDYVSMMSQEHAYCLAIENLLGSSTFTSFFVQVRALFDELTRLM 164 Query: 314 SHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAH-DLPRGW 372 +H L IST DVG M+P F+AF +R+++ + E ++G RMH A++R + L + Sbjct: 165 NHFLGISTHSLDVGNMSPAFWAFEERERLMEFYERVSGARMHAAFYRPNDLDWTGLNYQF 224 Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 L FL+ K + N I + R + + + +G R+ G Sbjct: 225 FIDLLFFLNNTYKSITEMFVILATNNIWRSRLVRIGVVDNAQVPLFAASGVVSRSAGFKK 284 Query: 433 DVR--KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM------ 484 D+R K YS Y +G + DCY R ++++ E+ +S+ I+ Q ++N+ Sbjct: 285 DLRILKTSTYSYYWFLKLRSFLG-KMGDCYDRFIIRIREMLESVFIIYQIISNLLVVFES 343 Query: 485 -PEGPFKAD-----HPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG 538 PF + T + +E LITHF S G +PA +Q +EA KG Sbjct: 344 TTALPFWYNTESYVSATFTKSQFNKKSTSMEALITHFKHYSEGIKVPAGLVYQSVEAPKG 403 Query: 539 INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 L SDGS+ +R ++RTP++ HLQ + + IRG +D+I LGS D V +V R Sbjct: 404 EFGVSLISDGSSKPFRCKIRTPAYHHLQFMSSQIRGHFFADMITILGSQDIVFGEVIR 461 >UniRef50_A6UVJ6 Hydrogenase, component E-formate hydrogenlyase subunit 5-like protein n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVJ6_META3 Length = 518 Score = 317 bits (813), Expect = 6e-85, Method: Composition-based stats. Identities = 95/502 (18%), Positives = 163/502 (32%), Gaps = 49/502 (9%) Query: 98 LISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMP 157 + S+ RN D L V + ++ +ERE + +GI HP L+ + Sbjct: 61 IYSVLRN-DTELYVLSTMVGTSFESLSQYNIKFQMFEREIAEQYGIVPKNHPWLKSVRYH 119 Query: 158 QTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLG 217 + +KG P D+ T E+ + +G Sbjct: 120 KNYKGAP----------------------DVFGNNYTAPIPGNYPFYEVGGEEIHQVAVG 157 Query: 218 PNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGC 277 P H GE I+ GY HRG EK + I Sbjct: 158 PVHAGIIEPGHFRFNCIGETILSLEIQHGYQHRGIEKQILNCKKEVLPLIIESIAGDTVI 217 Query: 278 VNEMPYVLAVEKLAGI--TVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 335 N + + A+E L+ + + R +L E+ RI +H+ + DVG + + Sbjct: 218 GNSICFSEAIEWLSNCNYEANEPLYNYRRLLLEIERIANHIGTMGGLAGDVGYIPTASYY 277 Query: 336 FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAAL 395 R ++ I G R + R G L + L + + + K + L Sbjct: 278 GRIRGDFLNMFVLICGNRFGRSSVRPFGAPFKLSDDHIKELIKRFEQLKKEVIDVGNLML 337 Query: 396 QNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS--GYENFDFEIPVG 453 N + GR K A G G RA+GI +DVRK+ + Y V Sbjct: 338 DNPEVLGRFDYTGIVDTKTAKLIGLVGPAGRASGIKYDVRKSFSKAKNIYNR--GIGLVA 395 Query: 454 GGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLIT 513 +R E S +E C+ + F+ + Sbjct: 396 RKDGAVSSRAKTYFYETLDS---IEFCIELLKVADFQINDSA-----------------D 435 Query: 514 HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 ++ + P + M EA +G S+ + +D + R +++ PSF + + +R Sbjct: 436 KLEKIEKTVLKPNSFIITMEEAWRGELSHCIITDENGNIIRYKIKDPSFHNWTALELVVR 495 Query: 574 GSLVSDLIVYLGSIDFVMSDVD 595 + D + S + D Sbjct: 496 NEGIYDFPLCNKSFNLSYCGFD 517 >UniRef50_Q8TY43 Ni,Fe-hydrogenase III large subunit n=1 Tax=Methanopyrus kandleri RepID=Q8TY43_METKA Length = 409 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 100/387 (25%), Positives = 173/387 (44%), Gaps = 34/387 (8%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + +GPNHP RI L + GEE+VDC ++GY HRG EK+ E W +R+ Sbjct: 27 HRVPVGPNHPILKEPLRIKLAVRGEEVVDCKVEMGYCHRGIEKIMEGMPWQKAAFLAERV 86 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + M ++ VEKLA R +RV++ EL RI SHL+ + + + T Sbjct: 87 CGICSHAHNMCFIGGVEKLAEGDPAPRGLFLRVLVQELDRIQSHLIANAAYFYSIEHETM 146 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + R+++ D +E ITG R+ W +GGV D+ + E LD + + +Y Sbjct: 147 FVWNMNTRERVLDCIEEITGNRILTGWNVVGGVRMDVTEDQLNNVLETLDAIRDDVITYR 206 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF-DVRKARPYSGYENFDFEI 450 + A + +K RS+GV ++ G RA+G+ D+R P Y F+ Sbjct: 207 RIAKNDPFIKLRSRGVGVITKDHIRKYRVVGPQARASGVPESDMRLQEP--VYPELGFK- 263 Query: 451 PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET 510 PV D R++++ +E QS+ ++E+ ++ +PEG + + Sbjct: 264 PVYRKEGDNLARILVRYDECLQSIELIERIVDELPEGRHRREL----------------- 306 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPA 570 + A +EA +G Y + + R +RTPS +++ + A Sbjct: 307 ------------EVNAGHVDNRVEAPRGELVYDMELAPGGVVKRVTIRTPSVPNIRVLEA 354 Query: 571 AIRGSL-VSDLIVYLGSIDFVMSDVDR 596 GS ++D + S+D ++ +R Sbjct: 355 IAPGSPSIADAVATYASLDPCVACNER 381 >UniRef50_Q21TB4 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TB4_RHOFD Length = 498 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 104/548 (18%), Positives = 172/548 (31%), Gaps = 65/548 (11%) Query: 48 IKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDI 107 I L E+ + + L L G L V L + + Sbjct: 15 IAATSLQELMQLCGQRLQAGERLLTLFG------RPAPELGVNIIVVTAVLQ-PAQGALV 67 Query: 108 MLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRK 167 +L+ + H T P A +ERE W+ G+ D HP L+ + Sbjct: 68 ILRATAQRGE-HYRCLTAQHPAAQIFERELWEQTGLFPDDHPWLKPV------------- 113 Query: 168 DYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAF 227 E + ++ + +GP H S Sbjct: 114 ---------------------RFEGERQQRMLEYPFFKVRGQEVHEVGVGPIHASVIEPG 152 Query: 228 RIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAV 287 GE + +GY HRG E + R+ P + I Y A+ Sbjct: 153 HFRFMCLGENVHHLEIQLGYQHRGVEGLLLRRPVWQLTPLVESICGDSAVAYAWGYGAAL 212 Query: 288 EKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVE 347 E ++ V + R + E+ RI HL + D+ + R I + + Sbjct: 213 ELMSNQPVAPAIQASRAIALEMERIAMHLATLGGMATDIAFLQGGATYGRLRTAIINASQ 272 Query: 348 AITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGV 407 + G R W R G A L + L L + L ++ R G Sbjct: 273 RVCGNRFGRGWIRP-GQAKPLSEALQQDLTRTLRAFAPDFTQINQLMLAARSVQARLHGT 331 Query: 408 AAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKV 467 + AL+ G TG RA+G+ D R P + Y + + V DC+ R+ L++ Sbjct: 332 GTVSQQAALDLGLTGPVARASGVALDHRTQWPGAAYGHAPLPM-VTEPDGDCWARMRLRM 390 Query: 468 EELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPAN 527 E+ SL L Q L + +A ++ P + Sbjct: 391 REVDASLAWLLQLLGDTTLNLSQAGQAQSSTPAALQAEALC------------------- 431 Query: 528 ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSI 587 ++E T+G L + +V+ PS A+ + A+R + +SD + S Sbjct: 432 --VSLVEGTRGPVLQVLETSAKGELRHYKVQDPSTANWFGLAFAMRDNAISDFPICNKSF 489 Query: 588 DFVMSDVD 595 D D Sbjct: 490 DLSYCGND 497 >UniRef50_A3DM94 Membrane bound protein complex subunit mbxL n=2 Tax=Desulfurococcaceae RepID=A3DM94_STAMF Length = 375 Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats. Identities = 109/403 (27%), Positives = 179/403 (44%), Gaps = 40/403 (9%) Query: 206 TENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYI 265 + + LGP HP A G L LDGE ++D G+ HRG EKM E + W + Sbjct: 1 MSKAKVLTVFLGPQHPGAPGNVGFKLLLDGERVLDIDLIPGFLHRGFEKMMEYRRWDMDL 60 Query: 266 PYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD 325 + RI E+ Y A+E++ GI P++ +RV+++E R+ SHLL++ F Sbjct: 61 VMSARICVEDPDHIELTYTHAMEQIFGIEPPEKAKYVRVIVAEFSRLASHLLWMMYFAGP 120 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 + A +A R++I + ++G R++ + GGV D+P + + L + Sbjct: 121 IAARYATSWAIAAREEILKWFDYVSGHRIYHHYIFPGGVRWDIPSDFKEKTLKVLKVIKP 180 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYEN 445 + + I + R++ + +A+ G TG LR +G+ FD+RK Y Y Sbjct: 181 LIDDIRDGFFYHPIFEKRARDMGRLKPGDAIRLGATGPTLRGSGVKFDLRKVLKYDAYGE 240 Query: 446 FDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP-EGPFKADHPLTTPPPKERT 504 DFEIP G D Y R ++++ E+ S+ I+ Q + MP EGP++ P T Sbjct: 241 IDFEIPSG-EYGDSYDRALVRLREMYISMEIIRQAVEKMPTEGPYRYRLPAT-------- 291 Query: 505 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST--------MSYRTR 556 +PA E +E+ +G ++ YR + Sbjct: 292 -------------------IPAGEGIGRVESARGEFLAHILQRPPGARRYSKPLSPYRIK 332 Query: 557 VRTPSFAHLQQIPAAIRGSL---VSDLIVYLGSIDFVMSDVDR 596 R P+ AHL + I + ++DL V +GS D D+DR Sbjct: 333 FRGPTMAHLTTVLKHIVHNEEITIADLPVLIGSFDPCPPDIDR 375 >UniRef50_A0L9R4 Membrane bound protein complex subunit mbxL n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R4_MAGSM Length = 391 Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats. Identities = 118/413 (28%), Positives = 180/413 (43%), Gaps = 26/413 (6%) Query: 186 QDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDI 245 + + + + + ++ L GP HP G + L L G+EIVD + Sbjct: 3 YQPDRSQYPQRRVDGRLDIDLASGKYLKLWHGPQHPGITGNMSVELTLCGDEIVDAKTHV 62 Query: 246 GYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVM 305 GY HRG EK+ ER+++ P R+ NE Y AVE+LAGI P+R IR + Sbjct: 63 GYLHRGFEKLMERRTFIQCFPIVCRVCVPEPDFNEYCYAAAVEELAGIECPERARWIRTL 122 Query: 306 LSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA 365 + E+ RINS+L+Y+ G + R + D E +TG R++ + GGV Sbjct: 123 ILEMGRINSYLMYLGGQSGAFGMGVIGQWTTYIRDLMLDRFEELTGARIYHMFILPGGVR 182 Query: 366 HDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGL 425 LP G+++ + E L + + N + K RS GV +G TG Sbjct: 183 DGLPEGFEQRMEETLRELESTMKDVRDVLFHNAVFKKRSVGVGVIDPAWLEPYGVTGPNA 242 Query: 426 RATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP 485 RA G+ DVR +PY Y +E VG D YTR ++ +L QS+ ++ Q L MP Sbjct: 243 RAAGVAKDVRIDQPYLVYPELSYEAIVGKDS-DIYTRADVRYRDLLQSVDLIRQILARMP 301 Query: 486 -EGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYL 544 EGP A P +P E++ E ++G YY+ Sbjct: 302 HEGPVMAKLPNVLHW-----------------------KIPQGETYIRGECSRGEYGYYV 338 Query: 545 TSDGSTMSYRTRVRTPSFAH-LQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +DGS R VR PS+ H + + I +SD+ + S+ +V+R Sbjct: 339 VTDGSGYPRRINVRGPSYTHAVALLEHMIINQNISDVAGLMVSLHTYPPEVER 391 >UniRef50_Q5P2H0 Subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenases n=15 Tax=Proteobacteria RepID=Q5P2H0_AZOSE Length = 551 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 92/483 (19%), Positives = 154/483 (31%), Gaps = 46/483 (9%) Query: 113 LAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPAR 172 L P ++ F A +R DL GI + + R + W Sbjct: 114 LDVVRPAYPDISRFFVPAVRMQRAAHDLVGIDAEDSGDSRPWLRHGAWPA---------- 163 Query: 173 ATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQ 232 + + + + + E + + +GP H Sbjct: 164 -------DYFPLRIENTGQERFAPQPDNYPFVFVEGDGVHEIAVGPVHAGTIEPGHFRFS 216 Query: 233 LDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAG 292 + GE+++ GY H+G E+ R+ Y +A E AG Sbjct: 217 VVGEKVLRLEERFGYTHKGIERRFMGMDIDEGARLAGRVSGDSTVAYAWAYAMAAESAAG 276 Query: 293 ITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGF 352 + VP+R +R +L E R+ +HL + D + R+ G Sbjct: 277 VAVPERAAWLRALLLERERVANHLGDLGALGNDAAFGFALAQFSRLREDWLRANFEAFGH 336 Query: 353 RMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGA 412 R+ R GGVA DL LR + +A + ++ L+ R Sbjct: 337 RLLMDCIRPGGVARDLDAAAAAQLRRDAVALVAEVAELKDIYDEHAGLQDRFVTTGRVAP 396 Query: 413 KEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQ 472 + A G TG RA+G D+R P+ Y+ D RV ++ +E + Sbjct: 397 ELAARLGLTGLAGRASGQVADLRVDFPWPPYDKLAVT-ASTQFNGDVAARVAVRFDECFE 455 Query: 473 SLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQM 532 SLR+++ L +P+GP A + A Sbjct: 456 SLRLIDALLAALPDGPLDAPVAIRD----------------------------AASGAGW 487 Query: 533 IEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMS 592 IE +G L +D R PS+ + I A ++V+D + S + S Sbjct: 488 IEGWRGEIFVALETDARGRIARCHCHDPSWQNWPVIEHASIDNIVADFPLINKSFNLGYS 547 Query: 593 DVD 595 D Sbjct: 548 AQD 550 >UniRef50_UPI00019012E4 NADH dehydrogenase subunit D n=1 Tax=Mycobacterium tuberculosis T92 RepID=UPI00019012E4 Length = 424 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 127/358 (35%), Positives = 194/358 (54%), Gaps = 19/358 (5%) Query: 207 ENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIP 266 + + + +N+GP HPS HG R++L+++GE +V+ IGY H G EK E + W + Sbjct: 34 DPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGIGYLHTGIEKNLEYRYWTQGVT 93 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGI--TVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 + R++YL NE Y L VEKL GI +P+RVNVIRV++ EL RI+SHL+ ++T Sbjct: 94 FVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVLMMELNRISSHLVALATGGM 153 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 ++GAMTP+F F R+ + L E ITG RM+ A+ R GGVA DLP + E L + Sbjct: 154 ELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGGVAQDLPPNAATEIAEALKQLR 213 Query: 385 KRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 + L + +N I K R+QGV + G TG LR+TG+ D+RK+ PY GY+ Sbjct: 214 QPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGPILRSTGLPHDLRKSEPYCGYQ 273 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPP---- 500 +++F++ + D Y R M++V+E+ +S++I+EQCL+ + GP P Sbjct: 274 HYEFDV-ITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKLRPGPTMISDRKLAWPADLQV 332 Query: 501 ------------KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS 546 + +E LI HF V+ G +PA + ++S Y S Sbjct: 333 GPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGPGLRRGGVPPVVSSAYTWS 390 >UniRef50_Q57935 Uncharacterized protein MJ0515 n=17 Tax=Euryarchaeota RepID=Y515_METJA Length = 380 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 99/390 (25%), Positives = 172/390 (44%), Gaps = 32/390 (8%) Query: 209 EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 E+ + +GP HP RI L LDGE+ VD ++GY HRG EK+ E + H I Sbjct: 3 ENMATIPIGPIHPVLKEPLRIKLVLDGEKPVDAEIEMGYVHRGIEKIMEGKHCHKGIHLA 62 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 +R+ + V+ M + +E ++ I +PD+ +RV+ EL RI+SHL+ + + + Sbjct: 63 ERVCGICSYVHTMTFAECIEHISKIEIPDKAKYLRVVTCELERIHSHLIASAVYNLSIEH 122 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 T + R+ I DL+E ITG R++ + IGGV D+ R + + LD L Sbjct: 123 ETLAMWLLNVREIIMDLMEMITGNRVNMGYNVIGGVRRDINREMMDEIYKKLDIFEDELK 182 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF-DVRKARPYSGYENFD 447 + + ++ RS+ + E + G R +G+ D R S Y+ Sbjct: 183 NIIEVFETGPLIALRSKEIGILPYHEVMRTRAVGPICRGSGLPESDWRLRH--STYQELK 240 Query: 448 FEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQH 507 F+ PV D + R+M++ EE+ +S+R++ + L + E Sbjct: 241 FK-PVWREEGDNFARMMVRHEEIIESVRLIREALEHYEE--------------------- 278 Query: 508 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 567 + ++V E EA +G +Y + + R +RTP+ +L+ Sbjct: 279 ----CSGDIRVKAEIKGGKGEW--RNEAPRGEVTYRMEITDGGIIKRIMIRTPTVMNLEA 332 Query: 568 IPAAIRGSL-VSDLIVYLGSIDFVMSDVDR 596 ++ V+D + SID +S +R Sbjct: 333 YKYMLKTCPTVADAVSAYTSIDPCVSCTER 362 >UniRef50_UPI0001C42022 energy-converting hydrogenase B subunit N EhbN n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C42022 Length = 391 Score = 311 bits (796), Expect = 7e-83, Method: Composition-based stats. Identities = 89/387 (22%), Positives = 165/387 (42%), Gaps = 33/387 (8%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 + +G HP+A +R+ ++ E I D IG +HRG E++ E T++I Sbjct: 14 TEIQMGTVHPAALEPYRVRFFVEDEIIKDAEITIGVNHRGIERVMEGLPVEKANMLTEKI 73 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + V EK G+ VPDR IRV++ EL R++SHLLY+ + + T Sbjct: 74 CGICSNSHTWNSVRTAEKGLGVEVPDRAVYIRVIVGELERLHSHLLYLGHGCETLAHETF 133 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV--AHDLPRGWDRLLREFLDWMPKRLAS 389 F R+ I DL+ I G R+ IGGV +L + + + +D + K + Sbjct: 134 SMRVFYIRETIMDLLAMIGGNRVQYGCSIIGGVRPRCELDDNRIQRILDGMDLVEKNVLD 193 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFE 449 + ++++++ R G ++AL+ +G LRATG+ D+R Y+NFD++ Sbjct: 194 FANRFVKDSVVASRISGTGYIPQEQALKLAVSGPTLRATGVKRDLRTDM--YEYDNFDYD 251 Query: 450 IPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIE 509 I + D +++++V E+ ++++I+ Q + ++PEG Sbjct: 252 I-ITQDTCDVQAQLLMRVFEIFEAIKIVRQAIRDLPEGKITDRSWEMIDTDLIE------ 304 Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 IE +G + +RTPS +++ + Sbjct: 305 ---------------------SYIEVPRGTLYHSYAI-EDGRVRHCIIRTPSMSNIGAMQ 342 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 A + ++D + + D + DR Sbjct: 343 YACIDNHITDGQLCIVQCDPCFTCSDR 369 >UniRef50_A9FF67 NAD-dependent dehydrogenase subunit n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FF67_SORC5 Length = 495 Score = 308 bits (788), Expect = 6e-82, Method: Composition-based stats. Identities = 97/519 (18%), Positives = 168/519 (32%), Gaps = 63/519 (12%) Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D R+ T +V L + DR+ + + ++ + T + +ERE Sbjct: 39 DMRVVTLYGRRDVDRVAVTAVLQASDRSLHVS-RTEVSAERGYHE-MTTEHAALHCFERE 96 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 + G GHP L+ I E Sbjct: 97 LHEQTGARIAGHPWLKPI----------------------------------RYEGQEQS 122 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 E ++ + +GP H GE++ +GY HRG E+ Sbjct: 123 AMSSHPFYKIEGKEVHEVAVGPIHAGVIEPGSFRFMCLGEQVHHLEIHLGYQHRGVERRL 182 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 + S P + I + + A+E LAG + + + R + EL R+ HL Sbjct: 183 LERDPRSLTPLIETIAGDTSVAHAWAHCSALESLAGCRLDIEIELARAVALELERVAMHL 242 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 ++ DVG + R + + + G R R GGV LP + Sbjct: 243 STLAGMAADVGFLQGATTYGRLRTTAINTMMRLCGSRFGKGALRPGGVRMRLPPEALPDI 302 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 R LD + L L ++ R + +A E G G RA+GI+ D R Sbjct: 303 RANLDLLQADLPIINDCFLMARTVQHRLRSTGTLTTAQARELGLVGLAARASGIELDARH 362 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 + Y + PV DC+ R +++ E+ SL + + Sbjct: 363 LVEHGAYSVVPIQ-PVVLPDGDCWARARIRIAEIEASLSWVSAVIALYANWE-------- 413 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 + S G + P + ++E +G + + + + Sbjct: 414 ------------------RPRPSIGELAPDQLAISLVEGFRGEVVHCVETGAHGEVVHYK 455 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 V+ PS + + A+RG+ +SD + S D D Sbjct: 456 VQDPSLRNWMGLALAVRGNEISDFPICNKSFDLSYCGND 494 >UniRef50_A3CUR5 NADH dehydrogenase (Ubiquinone) n=3 Tax=Methanomicrobiales RepID=A3CUR5_METMJ Length = 362 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 90/386 (23%), Positives = 173/386 (44%), Gaps = 35/386 (9%) Query: 214 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEY 273 + LGP HP R+ + GE ++ ++GY +G E++ + W + +R+ Sbjct: 9 IPLGPMHPCWKEPVRLKCETAGERVLKTELELGYMKKGIERIMRGRPWQEVMFLAERVCG 68 Query: 274 LGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVF 333 + V+ M ++ +E+++ I VP R +RV+++EL R+ SH+L ++ + T Sbjct: 69 ICSVVHNMVFIETMEEISDIPVPPRAAYLRVVVNELDRMASHILANFSYCYTIEHETLAM 128 Query: 334 FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKA 393 + R+ + D +E ITG R++ A+ GGV DL L L + + + Y + Sbjct: 129 YLLNIRETVLDNLERITGSRINTAYMIPGGVRFDLLPEDAAALLADLAKVEEEMKRYVRI 188 Query: 394 ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI-DFDVRKARPYSGYENFDFEIPV 452 ++ RS+G+ +EA+ T G RA+G+ D D+R P Y F + Sbjct: 189 FETGPLIALRSKGIGYMSREEAIRAHTVGPTARASGVEDSDLRLRHPT--YRELGFT-QI 245 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 D + RVM++ +E+ QS+ ++ +C+ +PEGP + Sbjct: 246 TRTEGDNFARVMVRFQEVFQSIDLIRKCVETLPEGPIRG--------------------- 284 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 G + A E+ EA +G +Y + +D +RTPS +++ ++ Sbjct: 285 --------GGLCKAGEASYAGEAPRGELTYTIKTDEYGRVVDIAIRTPSIMNIEACAHSM 336 Query: 573 R--GSLVSDLIVYLGSIDFVMSDVDR 596 + ++D+ S D ++ +R Sbjct: 337 IVDAASIADVTSTFISSDPCIACNER 362 >UniRef50_C0SF51 NADH-ubiquinone oxidoreductase 49 kDa subunit n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SF51_PARBP Length = 447 Score = 305 bits (780), Expect = 4e-81, Method: Composition-based stats. Identities = 129/448 (28%), Positives = 201/448 (44%), Gaps = 36/448 (8%) Query: 151 LRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEME-ALTFKPEEWGMKRGTENE 209 LR I P + T+ Q ++ + Sbjct: 34 LRSISASPALNATPSYRPTRLIPTDPDFAPGGPKHQPIKPPGSYAEPSALESEVGNGRKI 93 Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTD 269 +N GP HP+AHG R++L+L+GEEIV P +G HRG EK+ E +++ +PY D Sbjct: 94 RHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLHRGTEKLIEYKTYMQALPYFD 153 Query: 270 RIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM 329 R++Y+ NE + LAVEKL I +P+R IR M E+ RI +HL+ + + DVGA+ Sbjct: 154 RLDYVSMMTNEQCFSLAVEKLLNIEIPERAKWIRTMFGEITRILNHLMSVLSHAMDVGAL 213 Query: 330 TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 TP + F +R+K+ + E ++G R+H A+ R GGV D+P G + ++ Sbjct: 214 TPFLWGFEEREKLMEFYERVSGARLHAAYIRPGGVHQDIPLGLLDDIYQWATH------- 266 Query: 390 YEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE-NFDF 448 +A +T LK S + + + L T + A + G N + Sbjct: 267 ---SATASTKLKNCSPKIVSGKLEPRNRRRFLPQRLSITALAESCSVAPLFHGMSANPNL 323 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI 508 G + Y GP + + +PPP+ +++ Sbjct: 324 RRLRPGRIRRAYA------------------------AGPVRVEDYKISPPPRAAMKENM 359 Query: 509 ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI 568 E LI HFL + G +P E++ IEA KG +L SDGS YR ++R P FAHL Sbjct: 360 EALIHHFLLFTKGYAVPPGETYSAIEAPKGEMGVFLVSDGSERPYRCKIRAPGFAHLSCF 419 Query: 569 PAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 RG L++D + +G++D V +VDR Sbjct: 420 DQISRGHLLADAVAIIGTMDLVFGEVDR 447 >UniRef50_Q2NED9 EhbN n=5 Tax=Methanobacteriaceae RepID=Q2NED9_METST Length = 383 Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats. Identities = 86/395 (21%), Positives = 168/395 (42%), Gaps = 33/395 (8%) Query: 204 RGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHS 263 + +N+G HP+A +R+ L ++ E + D +G +HRG E++ E Sbjct: 13 KTERQVFETEINMGTVHPAALEPYRVRLFVEDEIVKDAEITVGLNHRGIERIMEGLPVEK 72 Query: 264 YIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI 323 T+++ + + E GI +P+R +RV+ EL R++SH+LY+ Sbjct: 73 ANALTEKVCGICSNGHIYNSCRVGEGALGIEIPERAVYLRVLAEELERLHSHMLYLGHGS 132 Query: 324 QDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV--AHDLPRGWDRLLREFLD 381 + + T F R+ + DL+ + G R+ +GGV DL + + + +D Sbjct: 133 EVLCHETFAMRIFYIRESVMDLLYMMGGNRVQYGISVLGGVRPRADLNLKEQQRVLDTMD 192 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 ++ +++A + + + + ++ R G K+AL+ TG LRATG ++D R Sbjct: 193 YIDEKVADFAERFIADPMVMHRITGTGELSQKQALDLHVTGPSLRATGYEYDFRTEM--F 250 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 YE F+F+I + D ++++ E+ +S +I+ Q + N+P+GP P Sbjct: 251 EYEPFEFDI-ITQDGGDVRANILMRATEIFESTKIIRQVIKNLPKGPIVTRDWDLVDSPV 309 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 + IE +G+ + + +RTPS Sbjct: 310 YK---------------------------SYIEVPRGVCYHSYGL-EDGKVRHSIIRTPS 341 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +++ + + G + D + + S D + DR Sbjct: 342 MSNIGAMQESCIGHPIQDAQLAIVSCDPCFTCTDR 376 >UniRef50_C6WGH3 NADH dehydrogenase (Quinone) n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WGH3_ACTMD Length = 358 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 113/384 (29%), Positives = 181/384 (47%), Gaps = 46/384 (11%) Query: 214 LNLGPNHPSAHGAFRIVLQL-DGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 ++LGP HPSAHGA+R+ L + D E I P +G+ HRGAEK+ E + + + +R + Sbjct: 20 VDLGPLHPSAHGAYRLRLTVRDDEVITSAEPLVGHLHRGAEKLFEVRDYRQVLTLANRHD 79 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 +L NE+ LAVE++ G+ VP R +R +L EL R+ +HL++++ V A Sbjct: 80 WLAAFCNELAVALAVERMTGMDVPPRAQWLRALLCELNRVMAHLVFLAPLTDPVAAA--- 136 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 R+ + ++E +G R+H RIGG+ D+P GW + LD + Sbjct: 137 ----RGREAVQAVLEEASGGRIHFMANRIGGLREDVPAGWAERVAGALDAVE-------- 184 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 + G+ +AL G TG RA+G+D D+R+ P Y D P Sbjct: 185 ----VPEVPTGLAGLGVLSRADALARGVTGPIGRASGVDLDLRRDDPLPAYRELDVR-PS 239 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 D + RV V++L Q++ + +CL +P GP P Sbjct: 240 VRDGGDAHARVACMVDDLAQAVALARECLRRLPGGPVNLRLPKAV--------------- 284 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 P + +EA G++ +L S G +R ++RTPSF ++Q + A + Sbjct: 285 ----------KAPEGSVYTRVEAPLGVSGVHLASRGEKTPWRLKLRTPSFNNVQALSALL 334 Query: 573 RGSLVSDLIVYLGSIDFVMSDVDR 596 G+ V+ L + LGS V+ D+DR Sbjct: 335 PGTPVAQLPLVLGSFAVVVGDIDR 358 >UniRef50_A6Q6W4 Ni-Fe hydrogenase, large subunit HycE n=3 Tax=Epsilonproteobacteria RepID=A6Q6W4_SULNB Length = 455 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 97/519 (18%), Positives = 180/519 (34%), Gaps = 68/519 (13%) Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 RL F + S + I ++ + + T K P+A W+ER+ Sbjct: 2 RLIARYAKEREGTFEIVTVFESETQRETI------SKENPVIRTLAKKHPSAIWFERKMS 55 Query: 139 DLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDLEMEALTFK 196 D FGI + + R ++ + + HP++K + L F Sbjct: 56 DDFGIVIEDAFDKRPLLHQERFPKAIHPMQKAFQKNT-------------------LDFA 96 Query: 197 PEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMG 256 + + +++GP H GE+++ Y +RG EKM Sbjct: 97 EFTPYKYEAIQGDGVFQVSVGPIHAGIIEPGHFHFSQAGEDMLHQEVRHFYKYRGIEKML 156 Query: 257 ERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL 316 E ++ P +RI + + V + AG+ +P + L E+ RI HL Sbjct: 157 EGKTLLEAKPVIERISGNESIAYQTAWRDIVCQAAGMELPLSLRKRHAFLLEMERIIHHL 216 Query: 317 LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL 376 + D G + FA + ++ +TG R D+ L Sbjct: 217 TDLGFIPNDAGFGAALAFASKLSEDARRQLQNVTGHRFGFDAIGFENKVLDISS-----L 271 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK 436 ++LD + K +A +E + L R + L++ T G RA+G D R+ Sbjct: 272 YDYLDGLQKDIAFFETWIMDIPSLWDRFDTTGILQKADVLKYDTVGVVARASGFSLD-RR 330 Query: 437 ARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 + P+ Y FEI D R ++++E++ S+ +++ L Sbjct: 331 SEPF--YLEHGFEIQT-EQSGDVAARFKVRLQEVKNSIVMMKHFLEE------------- 374 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 + T IE + + E++ G + + R Sbjct: 375 -----DDTHIDIE-------------KIKDGDYTAFAESSLGELFMNIEI-KDGVIERFF 415 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 VR PSF + Q + + ++++D + S D + D Sbjct: 416 VRDPSFMNWQTLHLMMPNNIIADFPLINKSCDLSYAGND 454 >UniRef50_Q5DUX5 NADH-ubiquinone oxidoreductase 49 kDa subunit n=3 Tax=Nyctotherus ovalis RepID=NDUS2_NYCOV Length = 412 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 112/397 (28%), Positives = 188/397 (47%), Gaps = 7/397 (1%) Query: 204 RGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHS 263 + + + LN GP HP++HG R+V+ + GE + P IG+ HRG E++ E S+ + Sbjct: 19 KDSTRFRILILNFGPQHPASHGVLRLVIVIIGEVVTKLDPHIGFLHRGTERLVEEHSYMN 78 Query: 264 YIPYTDRIEYLGGCVNEMPYVLAVEKLA-GITVPDRVNVIRVMLSELFRINSHLLYISTF 322 + DR++Y Y LAVE+ + R ++R + EL RI +HLL I+T Sbjct: 79 AAVFMDRLDYTTVLTQTHAYCLAVEQALAKSRLCIRTQLLRTIFDELSRILNHLLSIATH 138 Query: 323 IQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIG-GVAHDLPRGWDRLLREFLD 381 D+G M +F+AF DR++I +L E I+G RMH A + + H L + F Sbjct: 139 ALDIGTMAMLFWAFEDRERIMELYEYISGARMHTALYYPNQTLDHILTNELLAKILIFSR 198 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR--KARP 439 K A N + + R G+ + + +G R+TG+ D+R + Sbjct: 199 NSEKTYTEIYIALYNNRVWRLRLCGIGVVSTEISTSTTISGPVARSTGLQLDMRSGENYQ 258 Query: 440 YSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPP 499 Y Y + I +G D + R ++++ EL +S R++ L + + + + + Sbjct: 259 YGYYASLTLRIFLG-ISGDSFDRFIIRLRELFESTRLIYNSLIELSAYINISVYNMCSYS 317 Query: 500 PKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRT 559 IE+LI F ++ + +E+ KGI L ++ + YR +R+ Sbjct: 318 NNPHLK--IESLIELFRYSLGEYLLNISLVSGFVESGKGIFGIMLAANNTNRPYRLYIRS 375 Query: 560 PSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 P++ HLQ +P G ++DL LGSID V +VDR Sbjct: 376 PAYMHLQLLPKLGAGHHIADLATLLGSIDVVFGEVDR 412 >UniRef50_Q0BPG8 Formate hydrogenlyase subunit 5 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPG8_GRABC Length = 517 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 101/491 (20%), Positives = 174/491 (35%), Gaps = 42/491 (8%) Query: 108 MLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRK 167 +L VA P + P A W ER DL+G + + R + W Sbjct: 65 ILPVATPIEGGRFPALSPFRPAAAWQERAIRDLWGYEAEHGVDSRPWLDHGRWP------ 118 Query: 168 DYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAF 227 A + +T + + ++GP HP Sbjct: 119 ---ISAPLSPRPGPPLPPPEQAEWRMTSPFASSFVSSRPDIA-LHERSIGPVHPLMREPA 174 Query: 228 RIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAV 287 ++ L L G I +GY HRG + + + I RI + + + A Sbjct: 175 QLRLHLHGTLIRQAEWRLGYTHRGIQWLMRGKPLRDAIRIAARITGDAALAHGLAFARAA 234 Query: 288 EKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVE 347 E + P R ++R +++EL R HL ++ GA T R+++ ++ Sbjct: 235 EAALRLEPPPRALLLRGLMNELERCAVHLHVLAATASAAGADTYAAKLSAWRERLLRAIQ 294 Query: 348 AITGFRMHPAWFRIGGVAHDLPRG--WDRLLREFLDWMPKRLASYE-KAALQNTILKGRS 404 G RM GGV DL G + +L+ MP+ + YE A+L L Sbjct: 295 EAFGNRMMIDLLIPGGVLTDLLDGTALETVLQALARTMPELIEGYETAASLSGHGLCACL 354 Query: 405 QGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVM 464 +G A +A+ G RA+G D+R + + + D R+ Sbjct: 355 RGCAVLSGSDAVSLAVPGPAGRASGRPHDLRTTWQQAPHGTVHRLVL---ENGDADARMR 411 Query: 465 LKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVM 524 +++ E+++SLR+ L ++P GP P+ G Sbjct: 412 VRLAEIQESLRLALLFLESLPVGPIANPMPI-------------------------GTGN 446 Query: 525 PANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYL 584 + E + +E+ +G ++L +G M PS+ + I AA+ G+ + L V L Sbjct: 447 ASGEGYGGVESARGACWHWLRIEG-GMVVSAHAADPSWRLIPAIEAALPGTDIDRLGVAL 505 Query: 585 GSIDFVMSDVD 595 S + D Sbjct: 506 ASFALSPAGAD 516 >UniRef50_A5FW46 NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW46_ACICJ Length = 476 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 92/487 (18%), Positives = 166/487 (34%), Gaps = 66/487 (13%) Query: 111 VALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYP 170 V VP+ ++P WYERET D GI F G P ++ P Sbjct: 55 VWSVPAGGTVPSIATIWPLLGWYERETADHRGIAFSGQPEPFSLIAP------------- 101 Query: 171 ARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIV 230 + + G + L GP + Sbjct: 102 ---------------------LRADEEADLRRLPGLSGDAVQVLPFGPVRAGVVESAEFS 140 Query: 231 LQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKL 290 GE I+ VP + HRG E Q+ + + +R+ +G + + Y A+E Sbjct: 141 FFYVGEAILHYVPHLFLKHRGMEDRFVDQTPETGLVLAERVSGVGSVAHALAYAQAMEAA 200 Query: 291 AGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAIT 350 A + VP R RV+++EL R+ +HL Y+ +++ + +T Sbjct: 201 AQVAVPGRARYQRVIVAELERLYNHLHYLGHLADTTTLKVAHAEGALLAERVKQIGARVT 260 Query: 351 GFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAY 410 G R GG+ +L L LD + + Y + R Sbjct: 261 GSRFLRGVIAPGGLRREL---RVEGLAGALDALRAPIRRYIARLDASESHFDRLATTGVL 317 Query: 411 GAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGG-VSDCYTRVMLKVEE 469 + A + G TG RA+G+D D+R+ Y+ Y++ D + V G D + R +++ E Sbjct: 318 PREVAFDQGATGPVARASGLDRDLRRDHAYAAYDDPDLALAVATGTDGDAHARARVRIAE 377 Query: 470 LRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANES 529 + +L ++ + + P G + Sbjct: 378 IENALLMIVRAIALTPGGAIRVACAPAAGAEAM--------------------------- 410 Query: 530 FQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDF 589 E+ +G Y + R ++++PSF++ + P + G+ + D + S Sbjct: 411 -GWAESPRGTLIYAVHVGPDGRLARVKIKSPSFSNWRVFPYTVHGTNMMDYAINEASFGL 469 Query: 590 VMSDVDR 596 ++ R Sbjct: 470 TIAGCAR 476 >UniRef50_B0SCU7 Metal (Ni/Fe) hydrogenase, large subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU7_LEPBA Length = 475 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 77/459 (16%), Positives = 155/459 (33%), Gaps = 39/459 (8%) Query: 154 IMMPQTWKGHPLRKDY--PARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTEN--- 208 ++ + +R + ++S + D + L+ + ++ + Sbjct: 38 FLLDSNYPIWLIRHSFGQDMGPEDYSEIKEDDFLTDQRGKNLSLHQKTGIIRDLFYHGLK 97 Query: 209 ----EDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 + +GP H +DGE I +G+ RG ++ + Sbjct: 98 VPFSDGEYSHAVGPIHAGIIEPGHFRFIVDGEVIRHLTIRLGFQKRGIRDHLLHKAMNQV 157 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQ 324 +PY++ I + + E L I V + + R +L EL RI H+ + + Sbjct: 158 MPYSEMISGDTSVGYALAFSKIYEDLYEIPVSKEIRLFRSILLELERIAVHIGDLGGISE 217 Query: 325 DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGV-------AHDLPRGWDRLLR 377 D+G T+R L+EA TG R + R G + A + +L Sbjct: 218 DIGYYPLYGVCVTERGAALGLMEAWTGHRFGKSVVRPGRLYLNNRLNAKQAKESFKQLKN 277 Query: 378 EFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 ++ + ++ + LK R QG + +G G R G++ D+R Sbjct: 278 AYIKKIRPQILRALSI----STLKERMQGCGFISEMDVQNFGFVGMVARMAGVNEDLRIE 333 Query: 438 -RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLT 496 Y + + D + R+ ++ E+ QS+ +E+ + + + Sbjct: 334 NFDYPNWNPLPLKEEHHHYNGDVWARMYIRYSEIEQSMDWIEKTMEEI--------NWDL 385 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 PK + + +EA +G L D + + + Sbjct: 386 LWEPKVKVPNQ----------EILTKRTKPGFYYSAVEAWRGPLLVALQFDENGLVNNSY 435 Query: 557 VRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +R PS + + A+RG V+D + S + D Sbjct: 436 IRDPSVLNWHALELAVRGEQVADFPLNNKSFNLSYVGFD 474 >UniRef50_C7JEU8 NADH-ubiquinone oxidoreductase 49kDa subunit n=8 Tax=Acetobacter pasteurianus RepID=C7JEU8_ACEP3 Length = 498 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 105/563 (18%), Positives = 169/563 (30%), Gaps = 71/563 (12%) Query: 33 AFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADF 92 ++ ++ D LK P+V L+ G D +G P Sbjct: 6 HIWAGEETETPWRFRLQEMAWRDLVDALKHDDLPFVGLWC-DGTDVHALFLPDGQP---- 60 Query: 93 SVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLR 152 L LA D P + + YER +DL+G ++R Sbjct: 61 ----------------LAATLALEDGRYPALSPARDISCLYERRIYDLYGAEGMWATDVR 104 Query: 153 RIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFM 212 ++ W T + + E M Sbjct: 105 PLLDHDVW------------------SSSTPLAEHPGAGGGQKGLIHFQPAEHMHQEGDM 146 Query: 213 FLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE 272 GP + L + I GY HRG E + R+ Sbjct: 147 ADGWGPATGGMEPPLHVALAMQEGRIRAAETVTGYAHRGMELRWRNSRVEDACKLSARVA 206 Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 +++ + LAVE V + ++RV L EL RI HL ++ + GA Sbjct: 207 SGQSVAHQVAFCLAVEDACKEQVGPEIRLLRVALLELERICHHLFLLADMARLAGARLVA 266 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 R+K+ ITG R+ GG++ + + + + Sbjct: 267 SGCMGLREKLIQEAAPITGSRLLMDVCVPGGLSLRHATQMGDMCGRLCEVAERDYPALLA 326 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPV 452 + L + G+ A G G RA G D D R+ P GYE + Sbjct: 327 LWQEYPGLSMQLAGIGKVTADLLERVGLDGPTARAAGWDCDGRRMMP--GYEGI-WRFTS 383 Query: 453 GGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 G R ML +EE+ +SLR+L++ + + I Sbjct: 384 GRQDGTAEDRAMLLLEEVGESLRMLDE----------------------------VASRI 415 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 S M +E M+E G Y++ + R PS A L A + Sbjct: 416 GLTAGGSVQLSMQDSEGTGMVEGPWGGILYWVRL-KEGRVEQVFARNPSSAALLTFEAIL 474 Query: 573 RGSLVSDLIVYLGSIDFVMSDVD 595 G D+ + S+D + +D Sbjct: 475 PGHQPDDVALLARSLDINAAALD 497 >UniRef50_A5UWP3 NADH-ubiquinone oxidoreductase, chain 49kDa n=2 Tax=Roseiflexus RepID=A5UWP3_ROSS1 Length = 358 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 84/384 (21%), Positives = 151/384 (39%), Gaps = 29/384 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L LGP HP+ G R +L + + +VD G++ RG + R + RI Sbjct: 3 YSLALGPFHPAWLGPQRFILHIADDRVVDVEYQNGFNERGCAERLPRLPLPDALHLVARI 62 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + + A+E++ V R ++RV ++EL R +HL + +G Sbjct: 63 CGECSFAHSLAFCQAIEQVQRRKVGARAALLRVAIAELERTAAHLYTARAVLDAIGMEQR 122 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 Q+ D++ +TG R+ P GG+ DL + + L M L + Sbjct: 123 GAILDHFCQQSRDMLALVTGGRIPPPVCAPGGLLRDLTPVERQEVLAMLPGMSADLYRFI 182 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + L R+ V A ++G G RA+GI DVR +PY+ Y D + P Sbjct: 183 DRLIDQRFLLMRTVEVGVLPRAAAEQFGVRGPLARASGIRRDVRVDQPYAAYSMLDVQ-P 241 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 + D Y R++L + E + ++++E L +PE + P Sbjct: 242 IIQEGGDVYARLLLLLLEAYEGVKLVESALQRLPEEDPIVELP----------------- 284 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 +P ++ ++E +G Y L SDG R ++ TP Sbjct: 285 ----------HELPRGQASSVVEGPRGAIRYTLESDG-VRLTRVQIDTPRQCDRLLARTL 333 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVD 595 + + + D++ L S+ ++ + Sbjct: 334 LSRAQLDDVMAILASLAVCVACAE 357 >UniRef50_D1Y9R2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit n=3 Tax=Propionibacterium acnes RepID=D1Y9R2_PROAC Length = 382 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 103/406 (25%), Positives = 168/406 (41%), Gaps = 39/406 (9%) Query: 196 KPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKM 255 P + + + +L+LG HPS G I +D + I ++G HRG EK+ Sbjct: 11 HPSQSTDGDPGKKYEVTWLDLGHLHPSRPGLVTITTTVDDDVITSSQVNVGNLHRGDEKL 70 Query: 256 GERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH 315 E + + R ++ + E A+E GIT+P RV IR +L+E RI SH Sbjct: 71 FEARGYRQIPMLASRHDWTAPFIGETGAAHAIEDAMGITIPTRVAWIRTLLAEFSRITSH 130 Query: 316 ---LLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGW 372 L ++ D G + A + + + +G R+HP RIGG+ W Sbjct: 131 FTFLSWVGHHCDDAGLENAIATAI---ENARRIWQRCSGNRIHPMITRIGGLRIHPESEW 187 Query: 373 DRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF 432 L E+LD + A + +GVA +G +G RA+G+D Sbjct: 188 QPTLGEWLDDANALVTWLRTALDATVGV----RGVAVIPTNMIDRYGLSGPVSRASGVDL 243 Query: 433 DVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMP--EGPFK 490 D R+ + Y+ + V D Y+R+ + S + Q L+ +P +GP + Sbjct: 244 DTRRR--TAVYDELKWPEVVIEPRGDAYSRLATLCNDAAVSSSLCRQILDRLPNLDGPLE 301 Query: 491 ADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST 550 P T P ++ IEA G Y L S GST Sbjct: 302 TRLPTT-------------------------IKAPRGRTWTTIEAPWGRAGYLLESRGST 336 Query: 551 MSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +R +RTP+FA++Q + A + G+ V D+ + S+ + + D+D+ Sbjct: 337 TPWRMALRTPTFANVQVLEAVLPGTRVDDVEATIASLGWTLGDLDK 382 >UniRef50_A9B5Q0 NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5Q0_HERA2 Length = 368 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 79/384 (20%), Positives = 143/384 (37%), Gaps = 29/384 (7%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 L LGP HP R+VL+++GE+I D GY +RG + R + + I Sbjct: 13 YVLPLGPFHPDWQTPMRMVLRVEGEQIADVEFRDGYTNRGISERLTRTTIPQGLHLVSHI 72 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 + + + LA+E+L I +R +R++ E+ R HL + + +G Sbjct: 73 CAADSHAHSLGFCLALEQLLKINASERAAALRLLACEVERATVHLSTMKEVLTILGLQRD 132 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 ++++++ + G P + GGV DL + + + + + Sbjct: 133 AEHVQKLHHGLFEVMQHLCGTSSPPNYIVPGGVRQDLSSTEQESMALQFRRLERLMYRFV 192 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + + + R GV + A ++G G RA GI FD R R Y Y F Sbjct: 193 DRFIDHRGVLRRCVGVGVLSREAAEQFGVRGPMARAAGIGFDARIDRAYGAYAQFPPSR- 251 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 V D Y R+++ E +SL++ + L N+P G + + P + Sbjct: 252 VTQERGDVYARLVIFSLEAFESLKLAIRVLANLPSGDWAGNAPDS--------------- 296 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 +P IE+ +G Y + S+G R+ P Sbjct: 297 ------------VPQGSVTSNIESARGTLRYTVQSNG-VKLTSVRIDAPRQFDRLIARTI 343 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVD 595 + G + D + + S + + Sbjct: 344 LAGMNIDDAPLIIASASACTACSE 367 >UniRef50_Q056K8 Metal (Ni/Fe) hydrogenase, large subunit n=4 Tax=Leptospira RepID=Q056K8_LEPBL Length = 469 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 78/433 (18%), Positives = 140/433 (32%), Gaps = 26/433 (6%) Query: 166 RKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHG 225 +DY + E K + + K + + +GP H Sbjct: 59 EEDYSSYDFERYITADRKTDLEKFVTKKGIKDLVYKGLKVPIPASHYSHAVGPIHAGVIE 118 Query: 226 AFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVL 285 + GEEI + +G+ RG + + + PY + I + + Sbjct: 119 PGHFRFIVKGEEIRNLDIRLGFQKRGLIDLIKGKGSKDSFPYAEAISGDSTIAYAIAFSR 178 Query: 286 AVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDL 345 E+ I VP ++ R++L EL RI +H+ + DVG R + Sbjct: 179 IFEEAQKIAVPQELDFARLVLLELERIATHIGDMGAIAGDVGYYPLQGVCSLQRGVPLGV 238 Query: 346 VEAITGFRMHPAWFRIGGV--AHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGR 403 +EA+TG R G + L R L E + + + ++ + A + + R Sbjct: 239 MEALTGNRFGRGALSPGKIVLRKGLNREKLNELAERIRSVTADVVAHFERAANVSTNRER 298 Query: 404 SQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK-ARPYSGYENFDFEIPVGGGVSDCYTR 462 Q K+ G G + TG+ D+R + Y E+ D + R Sbjct: 299 LQSCGIIRQKQVRHLGFIGMVEKCTGLSRDLRSLEKSYMFSSPISLELNRDHMKGDAWAR 358 Query: 463 VMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGP 522 L+ EEL+ S + L + + F +V Sbjct: 359 FYLRCEELKNSGKWLIDAIPKLEA-----------------------AFSLKFGKVPSKS 395 Query: 523 VMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIV 582 + + +E +G L D + +R S + + A+RG + D + Sbjct: 396 SVKKGTYYSAVEGWRGPVLVSLDLDATGSIENAYIREVSVPNWHALELAVRGEYIGDFPL 455 Query: 583 YLGSIDFVMSDVD 595 S + VD Sbjct: 456 NNKSFNLSYVGVD 468 >UniRef50_C4PZT7 NADH-ubiquinone oxidoreductase fe-s protein 2 (Ndufs2), putative n=1 Tax=Schistosoma mansoni RepID=C4PZT7_SCHMA Length = 538 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 11/245 (4%) Query: 342 IYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILK 401 + L+ + G ++ + D G E L K N I Sbjct: 91 VLRLIMELDGEKI---------IRLDPHIGLLHRGTEKLIEY-KTYTQISDLLFDNPIWI 140 Query: 402 GRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYT 461 R++ V A++AL+ G +G LR +GI +D+RK +PY YE+ DF++PVG DCY Sbjct: 141 TRTKDVGIVSAEDALDLGFSGVMLRGSGIKWDLRKTQPYDAYEDMDFDVPVGVH-GDCYD 199 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWG 521 R ++++EE+RQSLRI+EQCLN MP+G K D PP + +E LI HF S G Sbjct: 200 RFIVRMEEMRQSLRIMEQCLNKMPKGEIKVDDAKICPPKRAEMKSSMEALIHHFKLFSEG 259 Query: 522 PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLI 581 ++P ++ +EA KG YL SDG+ YR +++ P FAH+ I RG ++ D++ Sbjct: 260 YLVPPGSTYTAVEAPKGEFGVYLVSDGTNKPYRCKIKAPGFAHMAAIDKLCRGFMLPDVV 319 Query: 582 VYLGS 586 + S Sbjct: 320 AVIVS 324 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 44/106 (41%) Query: 162 GHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHP 221 G +F ++A T + + LN GP HP Sbjct: 27 GPIRCCSRWVPDKKFMDELKESLYNPAVVKANTTVQPIDFFNVSHQEVQSVHLNFGPQHP 86 Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPY 267 +AHG R++++LDGE+I+ P IG HRG EK+ E +++ Sbjct: 87 AAHGVLRLIMELDGEKIIRLDPHIGLLHRGTEKLIEYKTYTQISDL 132 >UniRef50_UPI000186E11F NADH-ubiquinone oxidoreductase 49 kDa subunit, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E11F Length = 369 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 96/261 (36%), Positives = 134/261 (51%) Query: 163 HPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS 222 K +P R + Q L K + + LN GP HP+ Sbjct: 38 WGHNKWFPDRRYFEEYRKDHPIPQPLIDRDTVEKYNPFLDDEPNTEIQNVVLNFGPQHPA 97 Query: 223 AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMP 282 AHG R++L+L GE + C P IG HRG EK+ E +++ +PY DR++Y+ NE Sbjct: 98 AHGVLRLILELRGERVAKCDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQC 157 Query: 283 YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKI 342 Y LAVEKL I VP R IR M +EL RI +HL+ I T I DVGA+TP F+ F +R+K+ Sbjct: 158 YSLAVEKLLNIEVPLRAKYIRTMFAELTRILNHLMGIGTHILDVGALTPFFWFFEEREKL 217 Query: 343 YDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKG 402 + E ++G RMH A+ R GGV+ DLP G + +FL L + N I Sbjct: 218 MEFYERVSGARMHAAYIRPGGVSQDLPLGLMDDIHQFLTKFGSILDDVDDVLTNNRIWVD 277 Query: 403 RSQGVAAYGAKEALEWGTTGA 423 R+Q + A++AL +G T Sbjct: 278 RTQNIGVISAEDALNYGYTVP 298 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 51/87 (58%) Query: 510 TLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP 569 +I+ +++G +P ++ IEA KG YL SDGS+ YR +++ P FAHL + Sbjct: 283 GVISAEDALNYGYTVPPGATYTAIEAPKGEFGVYLVSDGSSKPYRCKIKAPGFAHLAALD 342 Query: 570 AAIRGSLVSDLIVYLGSIDFVMSDVDR 596 +G ++D++ +G++D V +VDR Sbjct: 343 KIGKGLFLADIVAIIGTLDIVFGEVDR 369 >UniRef50_D1HPS0 Whole genome shotgun sequence of line PN40024, scaffold_116.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HPS0_VITVI Length = 441 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 146/301 (48%), Gaps = 48/301 (15%) Query: 284 VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIY 343 A E+L I VP R + IRV++ EL RI SHLL++ F+ D+G TP F+ F +R+ +Y Sbjct: 8 ANAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGVQTPFFYIFRERELVY 67 Query: 344 DLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGR 403 DL EA TG RM +FRIGGV DLP GW +F D+ +A Y+K ++N I R Sbjct: 68 DLFEATTGMRMMHNYFRIGGVVVDLPHGWIDKCLDFCDYFLTGVAEYQKLIMRNPIFLER 127 Query: 404 SQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRV 463 +GV G +EA+ WG +G L+A+GI +D+ K Y Y+ FD+E+ D +R Sbjct: 128 VEGVGIIGVEEAINWGLSGPMLQASGIQWDLLKVDHYECYDEFDWEVQ-WQKEGDSLSRY 186 Query: 464 MLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPV 523 ++++ E+ ++I++Q L +P GP++ ++ L E Sbjct: 187 LVRIGEMMAFIKIIQQALKGIPGGPYENLEIRCFDRARDLELNDFE-------------- 232 Query: 524 MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVY 583 YR SF +LQ +P ++ ++D++ Sbjct: 233 -----------------------------YRFI----SFINLQILPQLVKRMKLADIMTI 259 Query: 584 L 584 L Sbjct: 260 L 260 >UniRef50_P21301 NADH-ubiquinone oxidoreductase 49 kDa subunit homolog n=3 Tax=Trypanosomatidae RepID=NDUS2_TRYBB Length = 386 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 105/385 (27%), Positives = 171/385 (44%), Gaps = 9/385 (2%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 GP HP+AHG +L GE IV IGY HRG EK+ E +S +PY DR+ Sbjct: 11 YRFTFGPQHPAAHGVLCCLLYFCGEFIVYIDCIIGYLHRGTEKLCEYKSVEQCLPYFDRL 70 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTP 331 +Y+ C NE L E + + R +R+++ E R + LL IS + D+G ++P Sbjct: 71 DYVSVCCNEHLLSLCFEYMLRCCLSLRCAFMRLLIVEFTRSFNGLLCISCMVLDLGCLSP 130 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + ++F +R K+ + G RMH A+ + G+ D G+ L + + Y+ Sbjct: 131 LLWSFEERDKLMTFFDLCCGCRMHLAFMVLLGILDDFVFGFVDFLLLLIISCLFVMDCYD 190 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIP 451 + N + R +G++ + + + +G R+ G+ +D R Y Y F ++ Sbjct: 191 LLFVGNRLFYLRLRGLSFFDLYDLVFNSLSGVLSRSLGMVWDCRLFSCYELYFMFCYDYC 250 Query: 452 VGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 + D + R+ L++ ++R SL I +QC IET+ Sbjct: 251 -FCFIGDAFDRLFLRLFDMRMSLLICKQCFFVG-----FFVFGFVCLFDYLYCDITIETI 304 Query: 512 ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAA 571 I F + + SF +E KG L + R R+R F H+ + Sbjct: 305 IMLFYSLWCCCLP--GISFACVEHPKGEYCLLLCFCV-GLCSRLRLRCADFLHICLLDVC 361 Query: 572 IRGSLVSDLIVYLGSIDFVMSDVDR 596 +RG L+ DL+ LG+ID V VDR Sbjct: 362 LRGFLLHDLVAVLGNIDVVFGSVDR 386 >UniRef50_Q978D6 Formate hydrogenlyase subunit 3 n=1 Tax=Thermoplasma volcanium RepID=Q978D6_THEVO Length = 389 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 67/421 (15%), Positives = 131/421 (31%), Gaps = 44/421 (10%) Query: 173 ATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQ 232 F K + L+ + E + N GP + Sbjct: 7 GKPEGRFVGNTEKYSVYEHILSDQRREIPSESYRNLPGEFTFNYGPATGGLIESVAFDFH 66 Query: 233 LDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAG 292 GE I R + S + +RI + + + +AVE Sbjct: 67 TPGELIKHVDVYPYIKTRKIK--VRGLSPEDALLLVERINGFHAASHAVAFEMAVEDALN 124 Query: 293 ITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGF 352 I VP+ V R+++ EL R+ S+L + + G P R+ I ++ + G Sbjct: 125 IDVPEEVQYSRIIMLELERMRSNLEVVKRLCEPAGFGVPQNQIAYLRENIARIITSFAGH 184 Query: 353 RMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGA 412 R + +GG + +L ++ + + LQ+ I R Q + Sbjct: 185 RYFFSSSYVGGCQFN-----GLVLESVIEDVKEEFEGIFNDLLQSKIFLNRLQNNGKISS 239 Query: 413 KEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQ 472 + G RA GI+ D R Y F+ V D + R ++ +E+ Sbjct: 240 SD-----MLGPAARAAGIEVDARIDEKRLPYSKLGFKPIVFDEP-DAFGRFYVRSKEILS 293 Query: 473 SLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQM 532 S ++ + + P E Sbjct: 294 SADLISKAIRFSGNSP------------------------------PAKIEKTNGEGAAR 323 Query: 533 IEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMS 592 +E+ +G YY+ + ++ +PS +++ ++ G++ +D S +S Sbjct: 324 VESPQGDLFYYVKIN-DGKISDVQISSPSLLNIEAFKKSMIGNIFTDYHFNWESFGIWVS 382 Query: 593 D 593 + Sbjct: 383 E 383 >UniRef50_B5ZIZ9 Ni Fe-hydrogenase III large subunit-like protein n=3 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZIZ9_GLUDA Length = 510 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 97/574 (16%), Positives = 174/574 (30%), Gaps = 85/574 (14%) Query: 30 GPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPA 89 G ++ E ++ L + P P+V L Sbjct: 13 AAALIRRGEAEAGAWRFRLEEEGWRDLVATLARDPLPFVGL---------------WADG 57 Query: 90 ADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHP 149 D H + ++ +++ ++A + + P A+ ER DL+G Sbjct: 58 QDV----HALFLEGGERVLV-ASVAPYGGRYLGLSGVRPAASLPERCVHDLWGFEAMEAR 112 Query: 150 NLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENE 209 + R + W A L + + Sbjct: 113 DTRPWLDHGVW----------------------TATWPLGPRPGPVSWPPDPPEFRPQPG 150 Query: 210 DFMFLNLGPNHPSAHGAFRIVLQLDG-EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYT 268 L +GP H + L L G + + +GY HRG + + Sbjct: 151 GGTILGIGPADGGHHTPGHLRLALGGRDTVGGAEWRLGYAHRGVMARLCGLDAPAAVRLA 210 Query: 269 DRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGA 328 R ++ A+E + V RV+L+E+ R+ +HL ++ + GA Sbjct: 211 GRAAAGASVAHQSALCRAIEAASDSMVGTGTERCRVLLAEIERVATHLHDVARTARAAGA 270 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 R+ + DL + G R+ R G G + + +++A Sbjct: 271 TALAAECEYLRESVMDLCGRMFGHRLLMDLVRPEGPDGHAGAGDAED-GAAIAAVARQVA 329 Query: 389 SYEK-------AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 + L+ R G G A G G RA+ + D+R+ P Sbjct: 330 DLVRGRMRVVGRCRDWPGLEARVVGRGVLGEHTARMLGVGGVAGRASAREEDLRRLVP-- 387 Query: 442 GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 GY + D R+ L++ E+ S+RILE + P P T PP+ Sbjct: 388 GY-RLGWLDTGVRRAGDVAARIDLRLAEIGGSVRILESAGADGP-------LPGTGTPPR 439 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 E E +G Y++ +G VR P+ Sbjct: 440 R-----------------------DGEGVGCAEGPRGAVWYWVRMEG-GAVRAAHVRDPA 475 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 AH+ + + G+ D+ + + S + D Sbjct: 476 LAHVAALEHVLAGADADDVAMIVRSFGLSAAAAD 509 >UniRef50_D2PJN4 Formate hydrogenlyase subunit 5 (HycE) n=10 Tax=Sulfolobaceae RepID=D2PJN4_SULIS Length = 391 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 75/428 (17%), Positives = 146/428 (34%), Gaps = 43/428 (10%) Query: 167 KDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGA 226 K Y L + +T + E T+ GP+ Sbjct: 2 KYYKWTQKGEGRKIGKIGDYCLYEKTITEEKCEENKPNITQTYGSFKFIYGPSAGGLLET 61 Query: 227 FRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLA 286 + ++ +GE+I+ ++ Y +R E + + + +RI + + ++LA Sbjct: 62 IKFIITTNGEKILGIDAEV-YKNR--EIVISGLTVDDALLRVERINAPFSASHTISFLLA 118 Query: 287 VEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLV 346 VE + + R+ EL RI +HL IS + P + +K+ L+ Sbjct: 119 VEDSLELEQDYPTQLKRIAEIELERIRNHLFVISRLTETTSLNVPTYHLLHLVEKVNRLI 178 Query: 347 EAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQG 406 + G R I GV D L +D + K L++ I R Q Sbjct: 179 GKMCGHRYFFGVNAINGVNCDF-----GNLLRIID-ITKEFKQIFDGLLESRIFIDRLQE 232 Query: 407 VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLK 466 ++ + G RA G+ +D RK YE+ F + D + R +++ Sbjct: 233 NGKI-----IDENSIGPAARAAGLTYDARKDFKALPYEDLGFRTVITQEA-DSFGRFLVR 286 Query: 467 VEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPA 526 E+ +S +IL + + + + E H Sbjct: 287 GMEIIESAKILVELHDEIKN-------------------SNNERGKNH--------KQGG 319 Query: 527 NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGS 586 E +E+ G +YY+ + + + + TPS +L ++ ++ +D S Sbjct: 320 GEGLARVESPSGDLAYYVKLN-NGIIDSVSLLTPSQVNLNLFLKSVINTIFTDFQFNWES 378 Query: 587 IDFVMSDV 594 +S++ Sbjct: 379 FGIWVSEI 386 >UniRef50_Q7G6A6 NAD, putative n=3 Tax=Magnoliophyta RepID=Q7G6A6_ORYSJ Length = 352 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 2/212 (0%) Query: 384 PKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 +RL +Y +N I R +GV +EA+ WG +G LRA+GI +D+RK Y Y Sbjct: 142 RQRLLAYLAKKNRNPIFLERVEGVGFISGEEAVNWGLSGPMLRASGIQWDLRKVDLYESY 201 Query: 444 ENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKER 503 FD+++ D R ++++ E+R+S++I++Q + +P GP++ K Sbjct: 202 NQFDWKVQ-WQKEGDSLARYLVRIGEMRESIKIIQQAVEKIPGGPYENLEVRCFKKAKNS 260 Query: 504 TLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFA 563 E + S + E + +EA KG YL D S +R ++R P F Sbjct: 261 EWNDFEYR-FLGKKPSPNFELSKQELYARVEAPKGELGIYLVGDDSLFPWRWKIRPPGFI 319 Query: 564 HLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD 595 +LQ +P ++ ++D++ LGSID +M +VD Sbjct: 320 NLQILPQLVKKMKLADIMTILGSIDIIMGEVD 351 >UniRef50_Q1WLV6 Mitochondrial NADH:ubiquinone oxidoreductase 49kD subunit 7 (Fragment) n=1 Tax=Chlamydomonas incerta RepID=Q1WLV6_CHLIN Length = 277 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 82/217 (37%), Positives = 123/217 (56%) Query: 189 EMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYH 248 +L + LN GP HP+AHG R+VL++ GE I+ P IG Sbjct: 61 MPWSLQAARSATAEALAPAKVNNFTLNFGPQHPAAHGVLRLVLEMQGEIIMRADPHIGLL 120 Query: 249 HRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSE 308 HRG EK+ E +++ +PY DR++Y+ E YVLA+E+L ++VP R IRV+ SE Sbjct: 121 HRGTEKLLEYKTYLQGLPYFDRLDYVSMMCMEHSYVLAIEQLLNLSVPLRGQYIRVLFSE 180 Query: 309 LFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDL 368 + R+ +HLL I+ DVGA+TP +AF +R+K+++ E ++G RMH +FR+GGV+ DL Sbjct: 181 ITRVLNHLLAITCHSMDVGALTPFLWAFEEREKLFEFYERVSGARMHAGYFRVGGVSQDL 240 Query: 369 PRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQ 405 P G R + ++ RL E+ N I K R+ Sbjct: 241 PIGLLRDVYDWARQFGLRLDEMEELLTGNRIWKERTV 277 >UniRef50_UPI000038DF6E Ni,Fe-hydrogenase III large subunit n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038DF6E Length = 384 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 75/410 (18%), Positives = 148/410 (36%), Gaps = 50/410 (12%) Query: 187 DLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIG 246 + E + +N ++ N GP+ + L GE I D + Sbjct: 20 YDIYASSIAPAVENTDQFADKNPGEIYFNYGPSAGGLRESVNFSLLTPGETIRDVIIHPE 79 Query: 247 YHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVML 306 Y R + + + +RI N + Y+LAVE+ GI + +N +R++ Sbjct: 80 YKKRDLKIL--GDPVSRALLKVERINGFHAASNSIGYILAVEEALGIENSE-LNDMRIVE 136 Query: 307 SELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAH 366 EL RI S++ I + G P R+++ ++ G R + G V+ Sbjct: 137 LELERIRSNIDVIKGMCESAGFAVPEKQLLYLREEVARIISRAFGHRYFFSVNGFGTVSG 196 Query: 367 DLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLR 426 D L+ + K+ L + I R Q + +TG R Sbjct: 197 DFSTI-------KLNAIEKQFRDIYDGLLSSKIFLDRIQENGIVKNE-----NSTGPAAR 244 Query: 427 ATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPE 486 A G FD RK Y NF PV +D ++R++++ EE+ +++ I++ Sbjct: 245 AAGFKFDARKDSKSLDYRNF---TPVTESGADSFSRLVVRSEEVFEAINIID-------- 293 Query: 487 GPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS 546 + + + + + + IE+ G YY+ Sbjct: 294 ----------------------SYGVKNIKTRTKNELTGSGKGSARIESPAGDIFYYVNI 331 Query: 547 DGSTMSYRTRVRTPSFAHLQQIPAAIRGSLV-SDLIVYLGSIDFVMSDVD 595 + ++ +PS+ +L+ A++ + + +D S +S+++ Sbjct: 332 -ENGKLNDIQMVSPSYLNLRLFREALKNNNIFTDFFFVWESFGIWISELE 380 >UniRef50_Q6L0U1 Formate hydrogenlyase subunit 5 n=1 Tax=Picrophilus torridus RepID=Q6L0U1_PICTO Length = 381 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 60/425 (14%), Positives = 132/425 (31%), Gaps = 49/425 (11%) Query: 169 YPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFR 228 + L DL + A T+ ++ + + + GP FR Sbjct: 1 MRYYSYGGRSGRLIGKAGDLTIYARTYNYDDIEHENEKRTDFSFNFSYGPLTGGIPEPFR 60 Query: 229 IVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVE 288 + GE+I Y R + + + IPY +RI + ++ +V Sbjct: 61 FDINTSGEKINYIKYY-NYKIRNIK--LKGINIKDAIPYIERINGNFAASYTICFLSSVM 117 Query: 289 KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEA 348 I +P + + ++ EL RI +HL ++ + G P +++ +++ Sbjct: 118 DALEIEIPYELKMYYIIEMELERIRNHLYVLARMCEPAGFNVPANMLMHIKERFSRIIDI 177 Query: 349 ITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVA 408 G R ++ D + + ++ + L + + R Q Sbjct: 178 TFGHRYFFGVNQLKSKRLD--------IHKMINVYKNEINDIYLNLLNSRLFTDRLQDNG 229 Query: 409 AYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVE 468 + TG RA G +D R Y + +EI D +R ++ Sbjct: 230 RILDDD-----MTGPAARAAGYKYDSRYDFDIFYYNDTGYEI-KTDDSGDAMSRFNVRFN 283 Query: 469 ELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 528 E+ S+ I+E + + + Sbjct: 284 EILNSIDIIENA-------------------------------ENKTGDSCYNILDGSGT 312 Query: 529 SFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSID 588 +E+ G ++Y+ + + ++ T +++ + G++ +D S Sbjct: 313 GLTRVESPSGDVAFYVEL-SNGVIKDLKIHTALERNMKSFLKSSTGTIFTDFHFNFESFG 371 Query: 589 FVMSD 593 +D Sbjct: 372 LWAAD 376 >UniRef50_Q00390 Coenzyme F420 hydrogenase subunit alpha n=9 Tax=Euryarchaeota RepID=FRHA_METVO Length = 398 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 122/389 (31%), Gaps = 22/389 (5%) Query: 220 HPSAHGAFRIVLQLDGEEIV-DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCV 278 G ++VL++D + IV RG EK + R + Sbjct: 10 TTRHEGHTKLVLKVDDDGIVEKGNYLSVTPVRGFEKFLVGKPAEFAPIAVSRFCGICPIA 69 Query: 279 NEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV----GAMTPVFF 334 + V A+E GI P ++R + +++SH L+ D + + Sbjct: 70 HATSAVEAIEDACGIVPPKDGLLLRELTGLGNKMHSHPLHEFLIAPDFIPEKDRVEYITR 129 Query: 335 AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAA 394 R+ +V+ I G +H ++GG+ + + K + Sbjct: 130 IQQMRKTGQYIVDTIGGEAIHAPNIKVGGMLKSITPSAVSKIYYKCKEFEKLAKEQVEYL 189 Query: 395 LQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVR------KARPYSGYENFDF 448 + I + R+ + + G G AT + R K Y+ Y+ ++ Sbjct: 190 I--PIFENRTLVDG---TEIPEKLGYHDFGYLATDSTYGNRENIEQKKVHEYTPYDVYEK 244 Query: 449 EIPVGGGVSDCYTRVMLKVEELRQSLRILE-QCLNNMPEGPFKADHPLTTPPPKERTLQH 507 E+ V + ++ E+ R + +R ++ Sbjct: 245 EVAV--QACQLFQEYNGRLMEVGPRARFAKFHDFKEKGAMAIHIARAYENVIHVKRAMEI 302 Query: 508 IETLITHFLQVSWGPVMPANE--SFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 IE L L + P++ E + EA +G N++ + D + ++ Sbjct: 303 IEELNVDGLTRAKDPILGDGEKLGLGVHEAARGHNTHQASIDEKGRITYYNAIVATTWNI 362 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 I A+ + + D +S Sbjct: 363 PLIGKAVEAHY-KFAEHVVRAYDPCVSCA 390 >UniRef50_B1L3Q0 Coenzyme F420-reducing hydrogenase, alpha subunit n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3Q0_KORCO Length = 427 Score = 201 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 64/419 (15%), Positives = 138/419 (32%), Gaps = 46/419 (10%) Query: 216 LGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 275 + + G I + ++G+ + V I R E++ +S++ T RI + Sbjct: 5 VVEHLARVEGHGDIEVVVEGDAVKRAVLRIYEGPRFFERILIGKSYYEVPDITARICSIC 64 Query: 276 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI--QDVGAMTPVF 333 ++ A+EK GI V +V +R + I+SH L++ +G + Sbjct: 65 PDPYQVASSRAIEKAMGIRVDRQVEALRELQLISDVIHSHALHLFFLALPDFLGYKDAIG 124 Query: 334 FAFTDRQKI----------YDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWM 383 A + + + E ITG +H + GG LR+ L+ Sbjct: 125 MAAQYPETVKLALKVKRAGNAIKEVITGRTVHGVVTKPGGYTKVPRAEDLERLRKQLESS 184 Query: 384 PKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 + + + +G +G L + P Y Sbjct: 185 IDGAREAIRVFSSLKMPEYSLDDNLYIAVDPGEHYGYSGEYLLVSDGTR-----HPVEKY 239 Query: 444 ENFDFEIPVGGGVS------------DCYTRVML---KVE-ELRQSLRILEQCLNNMPEG 487 + E+ V + R++L ++ E ++S L ++ Sbjct: 240 MDLTNEVTVEHSSAKHSSYKGSSFMTGALARLLLNEKRLYGEAKESYESLRDKIDPRNPF 299 Query: 488 PFKADHPLTTPPPKERTLQHIETLITHFLQVSW--GPVMPANESFQMIEATKGINSYYLT 545 + +R + I+ L+ ++ A E ++EA +G+ ++ Sbjct: 300 SNNMAQAIELLYSVQRAMDIIDGLLDEGIKDKLMVEVKPRAGEGIAVVEAPRGLLYHHYK 359 Query: 546 SDGSTMSYRTRVRTPSFAHLQQIPAAIRGSL-----VSD------LIVYLGSIDFVMSD 593 D + + TP+ + + +R ++ +SD L + + + D +S Sbjct: 360 LDDNGKVVFANLVTPTAQNAANMDKYLRIAVRNLKDLSDDELKLKLEMLVRAYDPCISC 418 >UniRef50_Q5FU77 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FU77_GLUOX Length = 479 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 83/472 (17%), Positives = 143/472 (30%), Gaps = 70/472 (14%) Query: 124 TKLFPNANWYERETWDLFGITFDGH-PNLRRIMMPQTWKGHPLRKDYPARATEFSPFELT 182 + F A W ER +DL+G+ N + W Sbjct: 75 SSRFAGAEWGERVAYDLYGVEAMDARGNGAPALDEGGW---------------------- 112 Query: 183 KAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCV 242 + G G L P G + ++ ++ Sbjct: 113 --------TSTWPLSSRPGPAAGGLRPLAGSHLLRPEQTGLSGPLELSFEVLKGKVRSVE 164 Query: 243 PDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVI 302 G HRG ++ +P R+ G + + + AV + G+ + + Sbjct: 165 VCAGGAHRGVVSRLLGRTPEEAMPLVSRMTAGGFVAHPLAFARAVAQARGLVPGPGIRDV 224 Query: 303 RVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIG 362 ++L E+ R++ HL ++ + V A R+ I R Sbjct: 225 WMVLLEIERMSLHLFDMARTARGVDAELLATHCDHAREAIARACAEQGVSRRLMDMVACD 284 Query: 363 GVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTG 422 G L L + M RLA+ E+ + + R G A + A + G Sbjct: 285 GFRDGL--EIVPLAQAVHAAMQPRLAALEEL---HRVFAPRLDGFAVLDVRLAERFAVGG 339 Query: 423 AGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLN 482 RA+G D+R+ + G D R L++ E+R SL++LE+ L Sbjct: 340 VTGRASGRSMDMRRREAGM---RLEALRATGSSQGDARAREGLRLAEIRDSLKLLERIL- 395 Query: 483 NMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSY 542 G + P + E + E +G Y Sbjct: 396 ----GSIGLEDDEPAPDRTD-------------------------EGIGVAEGARGDVWY 426 Query: 543 YLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 ++ VR P + L + A +RG VS + LGSI + + Sbjct: 427 WVRL-KEGRIESLHVRDPGVSLLPVLGAMLRGYPVSRVPAALGSIGISPAGI 477 >UniRef50_Q2LYD7 Nickel-dependent hydrogenase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYD7_SYNAS Length = 441 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 61/433 (14%), Positives = 128/433 (29%), Gaps = 70/433 (16%) Query: 218 PNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGC 277 G IV+ + +I C + R E M +S T RI + C Sbjct: 11 EYLTRVEGHGNIVIDVKEGKIDKCEFQVVESPRLFEGMLRGRSIFEAQHITSRICGICSC 70 Query: 278 VNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD--VG-------- 327 + + + A E G+T ++ +R +L + ++SH+L++ +G Sbjct: 71 GHSLASIQAAEDALGVTPTEQTIKLRKLLLDYEFLDSHVLHVYLLAAPDVLGVPSFVPLV 130 Query: 328 --AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 V A ++ D+ + + G +HP +GG + E L+ M Sbjct: 131 KTHNAVVRRALRMKKLCNDVCDILVGRHVHPISAIVGGFTKLPRPKDLDAMLEMLESMRD 190 Query: 386 RLASYEKA--ALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGID------------ 431 +A LQ ++ V E G G Sbjct: 191 DMAETLALAKTLQFPDFYRETEYVGLVSDDEEYPL-LMGDVGSTDGKRLGKKDYRQATNE 249 Query: 432 -FDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFK 490 D R + ++ + + + R L ++L + + + + P Sbjct: 250 FIDPRSSAKFAKWSRDSYLV-------GALARFNLNSDKLHPTAKAI---AEELGLKPIC 299 Query: 491 ADHPLTTPPPKERTLQHIETLITHFLQVSWG-----------------PVMPANESFQMI 533 + L T + E I + + A + + Sbjct: 300 HNPYLNTVAQVVEIVHCYEHAIDLIKDLKKNGINYDEEIVVGVNEQQKIPVRAGDGVGAV 359 Query: 534 EATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIP----AAIRGSLVSD---------L 580 E +GI + +D + + + P+ ++ I + + D + Sbjct: 360 EVPRGILFHNYVTDSNGIIEQANCIIPTNQNIANIEYDMMKLLP--EILDQTKEEITLKM 417 Query: 581 IVYLGSIDFVMSD 593 + + + D +S Sbjct: 418 EMLVRAYDPCISC 430 >UniRef50_Q0W6J7 Coenzyme F420-non-reducing hydrogenase (Methyl viologen-reducing hydrogenase), alpha subunit n=2 Tax=Euryarchaeota RepID=Q0W6J7_UNCMA Length = 471 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 64/440 (14%), Positives = 129/440 (29%), Gaps = 71/440 (16%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G +I + +D RG EK + ++ +I + + Sbjct: 11 TRIEGHAQITIDVDDNNKATDARLNIMEIRGFEKFLQGRAVEEAPRIVTQICGICPVSHH 70 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI----------------- 323 + AV++ G+ P N++R ++ I+SH L+ Sbjct: 71 LAAAKAVDECFGVEAPQTANMLRELMQYGQYIHSHSLHFYFLGAPDFVFTPDGNPTQRNV 130 Query: 324 -QDVGAMTPVF-FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 VGA + A R+ +VEA G ++P + GG++ L + L Sbjct: 131 FGIVGANPALATEAVMFRKIGQQIVEATAGRSINPVTYIPGGISKGLTQADVDRLLPMAK 190 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWG--------TTGAGLRATGIDFD 433 + A I + G E++ G LR G D Sbjct: 191 QAVTYAQNALALAK--PIFNQYIDAIKLLGEAESMHMGLVKNGNLELYDGMLRLQGKDGS 248 Query: 434 VRKARP---------YSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNM 484 + K Y + + P + + M +V L + + + +Q + Sbjct: 249 IIKEFKPQDYLQYISEYVYPHSYMKAPYWKEMG--WENGMYRVSPLSR-INVCDQIDTPL 305 Query: 485 PEGPFKADHPLTTPPPKERTLQHIETLITHFLQ-------------VSWGPVMP----AN 527 + P + L H LI +P A Sbjct: 306 ANAELQEFRKAFGRPAQMTLLYHYARLIELLYASEKAVELLSNKAITGKELRVPVKARAA 365 Query: 528 ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGS------------ 575 +IEA +G + +D M + + + + + I ++ + Sbjct: 366 TGVGVIEAPRGTLIHDYDTDEKGMITKANIIVATAHNNKAINLGLKNTAQKIINSPTPEE 425 Query: 576 -LVSDLIVYLGSIDFVMSDV 594 +++ + + + + D S Sbjct: 426 GILNRMEMVIRAYDPCFSCA 445 >UniRef50_D1ICJ9 Whole genome shotgun sequence of line PN40024, scaffold_246.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1ICJ9_VITVI Length = 765 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 87/265 (32%), Positives = 131/265 (49%), Gaps = 14/265 (5%) Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y+ E + AVE+L VP R IRV+ E+ RI++H L ++T DVGA TP Sbjct: 51 YVSTMAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPS 110 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL--DWMPKRLASY 390 +A +R+K+ + E ++G RMH ++ R GGVA DLP G + L DW + + Sbjct: 111 LWASEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCHVTCTELVADWAFSLIKAD 170 Query: 391 EKAALQNTILKGRSQG------VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYE 444 A L + R+ + A A+E G + +D R+A PY ++ Sbjct: 171 PLAFLLSKSRSNRACPSPYPLCLGAGSAQERPVLWWYGRHGLRERVCWDSRRAAPYDVHD 230 Query: 445 NFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT 504 D ++PVG D Y R +++EE+RQS+RI+ QC N MP G KAD PP + Sbjct: 231 QSDPDVPVGTR-GDRYDRYCIRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSR--- 286 Query: 505 LQHIETLITHFLQVSWGPVMPANES 529 + T I+ F VS+ P + + Sbjct: 287 --SLGTPISFFGAVSFPVPPPRHSA 309 Score = 98.2 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 51/108 (47%) Query: 489 FKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDG 548 + P T T I HF + G +PA ++ +EA KG +L S+G Sbjct: 658 TVSAKPRTLRLIYRSRSSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEIGVFLVSNG 717 Query: 549 STMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 S YR ++R P AH Q + + + + +D++ +G+ D V +VDR Sbjct: 718 SNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 765 >UniRef50_D1ICJ3 Whole genome shotgun sequence of line PN40024, scaffold_246.assembly12x (Fragment) n=14 Tax=Embryophyta RepID=D1ICJ3_VITVI Length = 385 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 91/405 (22%), Positives = 159/405 (39%), Gaps = 50/405 (12%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRI 271 N GP HP+AHG R VL+++GE + P IG G EK+ E +++ +PY+DR Sbjct: 11 FTSNSGPQHPAAHGVSRSVLEMNGEVVERAEPHIGSLQ-GTEKLIEYKTYLQALPYSDRS 69 Query: 272 EYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFR------INSHLLYISTFIQD 325 E G E + P R+ EL R I S + ++ Sbjct: 70 EGDRG-----------EITSRANDPLRLTECTGKERELGRSILWRSIRSITAHSHDLCRE 118 Query: 326 VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAW---------FRIGGVAHDLPRGWDRLL 376 +G AF +++ L++ G R R+G ++ R Sbjct: 119 IG-------AFGGTGELHLLLDRCVGQRARGTCCPPFPLCFENRLGIQWCNVKRSC---- 167 Query: 377 REFLDWMPKRLASYEKAALQNTILKGRSQGVAAYG-AKEALEWGTTGAGLRATGIDFDVR 435 M +A + K N K + V + +W + ++A + F + Sbjct: 168 -----DMKTLIAIWGKFPSGNNASKSEGRAVGHVTCTELVADWAF--SLIKADPLAFLLS 220 Query: 436 KARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILE----QCLNNMPEGPFKA 491 K+R EI G +R + K++ ++LR+ + + + + + Sbjct: 221 KSRSNRACPGTSNEIANGQREGSGLSRALAKLDSHSKALRVSKVLSGERWDRLYNRGSRC 280 Query: 492 DHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTM 551 L+ T I HF + G +PA ++ +EA KG +L S+GS Sbjct: 281 KLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPKGEFGVFLVSNGSNR 340 Query: 552 SYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596 YR ++R P AH Q + + + + +D++ +G+ D V +VDR Sbjct: 341 PYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 385 >UniRef50_B6YTV8 Coenzyme F420 hydrogenase alpha subunit n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTV8_THEON Length = 392 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 54/380 (14%), Positives = 115/380 (30%), Gaps = 13/380 (3%) Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEM 281 G ++VL + + D + RG EK+ ++ + RI L + + Sbjct: 11 RIAGEAKLVLYEENGTVQDALFIATAPIRGFEKLVVGKNPLFAVEAVMRICGLCHASHGI 70 Query: 282 PYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV----GAMTPVFFAFT 337 A+E GI P ++R L + RI SH+L D+ +F Sbjct: 71 AMSEAIENAIGIIPPRNGILMREALGLVNRIQSHMLEFLMVAGDLLIEEKREEVLFQLMD 130 Query: 338 DRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQN 397 KI D + + G HP +GG+ L+ L + + Sbjct: 131 FHAKISDYLLKMGGAATHPPNLTVGGMFSVPKWSVFNNLKARLPKLTGQWEEIAHLLTDE 190 Query: 398 TILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRK--ARPYSGYENFDFEIPVGGG 455 I +++ K+A + + + + PY Y + P Sbjct: 191 DI---QTEVADELREKKAENNYLVSSLFYGDRFNINAERIETMPYYEYRK---DNPHSKE 244 Query: 456 VSDCYTRVMLKVEELRQSLRI-LEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITH 514 + + E R+ + + + T R + ++++ Sbjct: 245 STTLIAFYGGEKVEAGPRARMKVYREFTDSSLYGLHTARVQDTTLALIRLEEILDSIKMD 304 Query: 515 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRG 574 + V + + EA +G + + +++ P+ ++ + +G Sbjct: 305 EPFRTKNIVFGPGKGVGVYEAPRGTLIHLIELGDEGRVVSSKIIVPTMFNIPVMEEMAKG 364 Query: 575 SLVSDLIVYLGSIDFVMSDV 594 V + D + Sbjct: 365 LSVKAAEAVMRLYDPCIPCT 384 >UniRef50_B8GAR8 NADH-ubiquinone oxidoreductase chain 49kDa n=3 Tax=Chloroflexus RepID=B8GAR8_CHLAD Length = 365 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 80/388 (20%), Positives = 139/388 (35%), Gaps = 46/388 (11%) Query: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIG-----YHHRGAEKMGERQSWHSYIP 266 L L P + H + ++ L ++GE I D Y R + GE + Sbjct: 3 YQLTLHPVAGAWH-SEQLTLTVEGEYIRDVEYRPATGDGAYAQRLLQGGGES-----AVR 56 Query: 267 YTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV 326 ++ + + LA+E LA IT P R IRV+++EL R SH+ ++ I + Sbjct: 57 AAAQVCPYCSVAHTLALSLALEALAEITAPLRAQAIRVIVAELERAASHMNTLAALIAAL 116 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 G + +I ++ A+ G A+ R GG+A ++ + Sbjct: 117 GLNSA-TRLSQLETRIRSILLALLGHH-EAAYIRPGGLAEPPDEARLADTERAINELLPH 174 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + + + L R + + A ++G G RA+ I D R PY+GY Sbjct: 175 MIELAEQTIPRRTLVARMVDIGVLTTEAARQFGLAGPLGRASDITTDQRIDAPYAGYTVL 234 Query: 447 DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQ 506 + V D + R ++ + E +SLR+ + L+N+P G L Sbjct: 235 TPALVV-EQGGDVHARAVVLLIEAIESLRLAVRWLHNLPIGETYTAFTLRL--------- 284 Query: 507 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV-RTPSFAHL 565 E +EA +G Y + SDG + P L Sbjct: 285 --------------------GEGTATVEAPRGPLRYTVRSDG-QRLTAVEIGIAPQLDRL 323 Query: 566 QQIPAAIRGSLVSDLIVYLGSIDFVMSD 593 ++ + V D ++ S D + Sbjct: 324 LA-RTLLQNAAVDDTLLIAISTDPCTAC 350 >UniRef50_C1A0H7 Putative NiFe hydrogenase alpha subunit n=2 Tax=Corynebacterineae RepID=C1A0H7_RHOE4 Length = 434 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 68/435 (15%), Positives = 122/435 (28%), Gaps = 55/435 (12%) Query: 203 KRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWH 262 N D L LG G R+ + + +I R E + + Sbjct: 1 MDSETNTDTTRLTLGSL-ARVEGEGRLAFTVRHGRVEAAELNIYEPPRFFESFLRGRDFR 59 Query: 263 SYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF 322 T RI + ++ A+E+ G + + +R +L I SH L+I Sbjct: 60 EPPDITSRICGICPVAYQVSACNAIEQACGAHLTQPILDLRRLLYCGEWIASHTLHIYLL 119 Query: 323 --IQDVGAMTPVFFAFTDRQKIYD----------LVEAITGFRMHPAWFRIGGVAHDLPR 370 +GA + A R + +++ I G +HP R+GG Sbjct: 120 HAPDFLGASDAIELARIARPDVERGLTLKKAGNAILDMIGGRSIHPVNVRLGGFYRTPTP 179 Query: 371 GWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTT-GAGLRATG 429 L E L W + + I + + G +G Sbjct: 180 SELAPLAEQLRWALDDALATVQWVSHFEIPDAE-VDTELLALAQPGRYAIEDGVLTTTSG 238 Query: 430 IDFDVRKARPYSGYENF-DFEIPVGGG-----VSDCY-----TRVMLKVEELRQSLRILE 478 F P ++ + ++P Y R L +L ++ Sbjct: 239 SSF-----APEEFCDHVAERQVPHSTALHAHLDGQAYLTGPLARYSLHSADLSET---AR 290 Query: 479 QC--------LNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESF 530 Q + P T E E V P A + Sbjct: 291 QAATEAGLGTVCRNPFQSIVVRAVETVFAVDEALRLIREYYRPESPYVDMSPR--AATGY 348 Query: 531 QMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSL-----VSDLIV--- 582 + EA +G+ + D R + P+ + I +R +L ++D + Sbjct: 349 GVSEAPRGVLYHLYQLDSEGRILRATIIPPTSQNQAAIENDLRNTLAANLTLTDAELTEL 408 Query: 583 ---YLGSIDFVMSDV 594 + + D +S Sbjct: 409 CERTIRNYDPCISCA 423 >UniRef50_P19496 Coenzyme F420 hydrogenase subunit alpha n=2 Tax=Methanobacteriaceae RepID=FRHA_METTH Length = 405 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 60/380 (15%), Positives = 123/380 (32%), Gaps = 18/380 (4%) Query: 224 HGAFRIVLQLDGEEIV-DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMP 282 G +V+++D E IV RG EK+ ++ + RI + + + Sbjct: 14 EGHAELVMEVDDEGIVTKGRYFSITPVRGLEKIVTGKAPETAPVIVQRICGVCPIPHTLA 73 Query: 283 YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV----GAMTPVFFAFTD 338 V A++ I VP ++R + +NSH ++ D + Sbjct: 74 SVEAIDDSLDIEVPKAGRLLRELTLAAHHVNSHAIHHFLIAPDFVPENLMADAINSVSEI 133 Query: 339 RQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNT 398 R+ +V+ + G +HP+ RIGG+A ++ + L L + ++ + + + Sbjct: 134 RKNAQYVVDMVAGEGIHPSDVRIGGMADNITELARKRLYARLKQLKPKVDEHVELMIGLI 193 Query: 399 ILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSD 458 KG +G+ + G + F + P S Y++ + + Sbjct: 194 EDKGLPKGLGVHNQPTLASHQIYGDRTKFDLDRF--TEVMPESWYDDPE----IAKRACS 247 Query: 459 CYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQV 518 + E+ R++E E A H K + IE L Sbjct: 248 TIPLYDGRNVEVGPRARMVE--FQGFKERGVVAQHVARALEMKTALARAIEILDELDTSA 305 Query: 519 S----WGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRG 574 + IE +G++ + + P+ ++ + A G Sbjct: 306 PVRADFDERGTGKLGVGAIEGPRGLDVHMAQV-ENGKIQFYSALVPTTWNIPTMGPATEG 364 Query: 575 SLVSDLIVYLGSIDFVMSDV 594 + + D +S Sbjct: 365 FHHEYGPHVIRAYDPCLSCA 384 >UniRef50_Q9KGW7 NADH dehydrogenase I subunit C n=3 Tax=cellular organisms RepID=Q9KGW7_PSEFL Length = 200 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 105/177 (59%), Positives = 130/177 (73%), Gaps = 1/177 (0%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMD 77 D V+ EL NRFGP+AFT Q TRTG+PV+W+ R +L+EV FL+ LPKPYVML+DLHG+D Sbjct: 16 DQDVVVELNNRFGPEAFTAQPTRTGMPVLWVARAKLVEVLTFLRNLPKPYVMLYDLHGVD 75 Query: 78 ERLRTHREGLPAA-DFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 ERLRT R+GLP DF+VFYHL+SI+RN D+M+KVAL+E+DL VPT T ++PNANWYERE Sbjct: 76 ERLRTKRQGLPDGVDFTVFYHLMSIERNSDVMIKVALSESDLSVPTVTGIWPNANWYERE 135 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEAL 193 WD+FGI F GHP+L RIMMP TW+GHPLRKD + + Sbjct: 136 VWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDPGPCHRVRPVQPVPGQATCSRKKPR 192 >UniRef50_Q3AU04 Hydrogenase/sulfur reductase, alpha subunit n=10 Tax=Chlorobiaceae RepID=Q3AU04_CHLCH Length = 426 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 63/416 (15%), Positives = 118/416 (28%), Gaps = 44/416 (10%) Query: 218 PNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGC 277 + G I + + E+V+ I R E M + S T RI + Sbjct: 12 HHLTRVEGHANIHIHVKNGELVEAQWAIIETPRFFEVMLKGMSAEQAPFLTSRICGICSI 71 Query: 278 VNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI--QDVG-------- 327 + + + A+E+ IT P V+R + + SH L++ G Sbjct: 72 SHSLANIRALERAMQITPPPLAEVVRRLAMHGETLQSHALHLFFLAVPDFAGLPSVLPLM 131 Query: 328 --AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 V ++ + A G HP +GG+ + L Sbjct: 132 ESHPQVVRAGLQLKELGNSISIAAAGRATHPVSLVLGGITKAPELQQLKELLTMTQERKL 191 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEW-GTTGAGLRATGIDFDVRKARPYSGYE 444 LA + I ++ + + G + + GI D Y Sbjct: 192 ALAQAVTFFEELHIP-NFTRETEFISLCNGVTYPAIGGQLVSSDGITRD---ENDYLLMT 247 Query: 445 N---FDFEIPVGGGVSD--CYTRVMLKVEELRQSLRILEQCL-NNMPEGPFKADHPLTTP 498 N DF +S + + L Q + P + + Sbjct: 248 NEYTRDFSTSKFTRLSRNSSAAGALARFNNNYHLLHPNAQAVAARFGLQPVCHNPFMNNI 307 Query: 499 PPKERTLQHIET--------LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST 550 + +E + + A + +EA +GI +Y+ ++ Sbjct: 308 AQLVECVHILEDAEELIGMVMDMKGEETKCHYTPQAGAATGAVEAPRGILYHYMETNDEG 367 Query: 551 MSYRTRVRTPSFAH-------LQQI-PAAIR-----GSLVSDLIVYLGSIDFVMSD 593 M R P+ + LQ + +R G + + + S D +S Sbjct: 368 MVVRADCIIPTTQNNGNIYDDLQALAAELLREGKCDGEIQLQCEMLVRSYDPCISC 423 >UniRef50_B5YHQ8 Hydrogenase/sulfur reductase, alpha subunit n=2 Tax=Bacteria RepID=B5YHQ8_THEYD Length = 442 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 61/426 (14%), Positives = 137/426 (32%), Gaps = 62/426 (14%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G IV+++ ++ C +I R E +S + T RI + C + Sbjct: 13 TRVEGHGNIVVEVKDGKLEICRLEIVESPRFFEAFLRGRSIYEAPHITCRICGICSCGHT 72 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF--IQDVG----------A 328 + + A E GI ++ ++R +L +++SH+L+I VG Sbjct: 73 LASIQAAEDALGIKPTEQTVLLRKLLLHYEQLDSHILHIYLLVAPDLVGVPSFVPLIKSH 132 Query: 329 MTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 V A ++ +L + + G +HP IGG + + L + K + Sbjct: 133 PDVVIRALRMKRLCNELCDILVGRHVHPISAVIGGFTKLPSEIDLEEMHKKLLALQKDIE 192 Query: 389 SYEKAA--LQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + L+ + ++ +A ++ L D + Y Y+N Sbjct: 193 VTIELFKDLKFPEFERDTEYIALVNDEDEY------PLLYGDIGSTDGYRVSKYE-YKNV 245 Query: 447 --DFEIPVGGGVSDCYTR------VMLKVE-----------ELRQSLRILEQCL------ 481 +F +P + R + + E +L + +C+ Sbjct: 246 TNEFIVPYASAKRTKWHRESYAVGALARFNLNYEKLHPKAKEAAATLGLKPKCINPYLNT 305 Query: 482 -NNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGIN 540 + E + + + + + ++ + A E +E +G+ Sbjct: 306 VAQIVECVHCVEDAIRIIETLWQKGINYDEVVVPDINEHGLLPQRAGEGVGAVEVPRGLL 365 Query: 541 SYYLTSDGSTMSYRTRVRTPSFAHLQQIPA-AIRGSLVSDLI------------VYLGSI 587 ++ D + P+ + I ++ LV ++I + + + Sbjct: 366 IHHYECDERGIFRNANCIIPTNQNTHNIELDMLK--LVPEIINQSPEEIRLSLEMLVRAY 423 Query: 588 DFVMSD 593 D +S Sbjct: 424 DPCISC 429 >UniRef50_B5IEA3 Nickel-dependent hydrogenase superfamily n=3 Tax=Aciduliprofundum boonei T469 RepID=B5IEA3_9EURY Length = 421 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 56/410 (13%), Positives = 125/410 (30%), Gaps = 45/410 (10%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G + ++++ E + + + R E +S+ RI + +E Sbjct: 12 TKIEGHANLTIEIEDENLKRVIFGVHEGSRYFEAFMVGKSYKYLPELAGRICGICTVAHE 71 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT---------- 330 + V AVE GI + + V +R ++ I SH+L++ Sbjct: 72 IASVRAVEDALGIEISEEVEDLRKLMLISSHIQSHILHLYFLALPDYRNVESIIELANKN 131 Query: 331 --PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 V AF ++ + E I G + P G V+ + + + + + L Sbjct: 132 VNLVKKAFELKEASNYMTELIGGRAVQPCTIVPGKVSKRIGKETIERYIKKMKEIYPFLL 191 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF-D 447 + L K + AL G + + I P+ E+ + Sbjct: 192 DTAELFLSLEYPKYERE-----SEYVALWDGHSIPLYKGE-IATLSSIFDPHQYQEHIRE 245 Query: 448 FEIPVGGGVSD----------CYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 + + R+ + ++ + E+ P + Sbjct: 246 WVVEYSSAKHSLIEGRDYMVGALARLNINRNLREEARELAERYGVRFPSNRIAWINLAQA 305 Query: 498 PPPKERTLQHIETLITHFLQVSWGPVMP--ANESFQMIEATKGINSYYLTSDGSTMSYRT 555 L+ +E +P + E +IEA +G+ ++ + Sbjct: 306 LENVHFALEAMEIAENLKEYDPHKINIPRVSGEGVGVIEAPRGLLIHHYKI-KNGKCTYV 364 Query: 556 RVRTPSFAHLQQIPAAIRGSLVSDLIV------------YLGSIDFVMSD 593 + TP+ + + I ++G +S ++ + + D +S Sbjct: 365 NIITPTAMNTENIERILKG-YISQIVSKNDEYIKMEAEKIIRAYDPCISC 413 >UniRef50_C5A2R8 Coenzyme F420 hydrogenase subunit alpha (FrhA) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R8_THEGJ Length = 393 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 116/382 (30%), Gaps = 18/382 (4%) Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEM 281 G +++L + + D + RG EKM ++ + RI L + + Sbjct: 14 RIAGEAKLILYEEDGVVQDALFIATAPVRGFEKMVVGKNPLFAVEAVMRICGLCHASHGI 73 Query: 282 PYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV----GAMTPVFFAFT 337 A+E G+T P ++R L + R SH L D+ +F Sbjct: 74 AASEAIEHAIGVTPPRNGRLMREALGLINRAQSHALLFLMVAGDLIKEEKRNDVLFKLMD 133 Query: 338 DRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQN 397 KI D + + G HP IGG+ L+ + + E+ + Sbjct: 134 FHAKISDYLLKLGGAATHPPNLTIGGMLSVPKWSVFNNLKARFKDLTASWEAAEELLIDE 193 Query: 398 TI---LKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGG 454 I + + A + I++D + PY + + Sbjct: 194 DIQTEIADELREAKRPFKYLASGFFYGDRY----NIEWDKVSSVPYYEFRKEE----AAR 245 Query: 455 GVSDCYTRVMLKVEELRQSLRIL--EQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI 512 + + + E R++ + + G A T + E I Sbjct: 246 ESTTLVSFYDGEKVETGPRARMITYREFRDESLYGLHLARIEDTRLAIQRLGEILDEIRI 305 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI 572 + P + + EA +G +Y+ ++R+ P+ ++ + Sbjct: 306 EEPFRTGDITFRP-GKGVGVYEAPRGTLIHYVELGEEGRVLKSRIVVPTMFNIPVMEEMA 364 Query: 573 RGSLVSDLIVYLGSIDFVMSDV 594 +G V + D + Sbjct: 365 KGLSVKAAEAVMRLYDPCIPCT 386 >UniRef50_O66988 Hydrogenase large subunit n=1 Tax=Aquifex aeolicus RepID=O66988_AQUAE Length = 416 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 61/438 (13%), Positives = 118/438 (26%), Gaps = 96/438 (21%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G + L + I D Y RG EK+ + + + RI + G + Sbjct: 9 TRVEGEASLNLVWERGVIKDAKIS-FYSTRGIEKVLRERPFMDALVINPRICGICGHAHL 67 Query: 281 MPYVLAVEKLAGI-TVPDRVNVIRVMLSELFRINSHLLY--ISTFIQDVGAMTP------ 331 + V A+E GI +P++ + R++ + +H+ + + + Sbjct: 68 IATVRAIENAIGIKEIPEKAKITRLVTQITEMVQNHVKWFYLFVMPDFLKFKESLSQFEP 127 Query: 332 -----VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 A +I ++ G H ++ GG+ + + Sbjct: 128 FKGERWKRAVQFSSQIVKIIALFGGQWPHSSYAVPGGITSNFSEREVLKALNLVKEGKTF 187 Query: 387 LASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDF-------------- 432 + + + + +A +G GL Sbjct: 188 FE--KNVSEDLELFLNLCEEFNLLSIGKAYNRFLSGGGLAYCFNPSYKKGKGKVCKFNVR 245 Query: 433 --------DVRKARPYSGYENFDFE---------------IPVGGGVSDCYT-RVMLKVE 468 D KA P Y+ +E + + D Y RV ++ Sbjct: 246 YVQELEAADYSKANPVR-YKGLPYETGPLARELISKNPLVLKLYKNYGDSYAVRVAARLA 304 Query: 469 ELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 528 E++ D + + H+E + + E Sbjct: 305 EIK--------------------DLLEILEKLLKELMNHLEE----PSCLWEDRSDESGE 340 Query: 529 SFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAH--------LQQIPAAIRGSLVSD- 579 F ++EA +G + + +V TPS + L AI G D Sbjct: 341 GFGVVEAARGTLIHRVVI-EKGKIKDYKVITPSQWNLGPRCKKYLGVAEKAIVGL---DS 396 Query: 580 ---LIVYLGSIDFVMSDV 594 + L S D Sbjct: 397 ELKAQMVLRSFDLCSVCT 414 >UniRef50_B9M7G0 Nickel-dependent hydrogenase large subunit n=5 Tax=Geobacter RepID=B9M7G0_GEOSF Length = 425 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 59/409 (14%), Positives = 123/409 (30%), Gaps = 35/409 (8%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G + + +DG + + R E + + + RI L ++ Sbjct: 11 TRVEGHGVVRVFMDGSHVDRVELALVEPPRLFEVLLRGKHFREIPDIICRICSLCSTIHR 70 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD-----VGAMTPVFFA 335 + ++AVEK GI V + R ++ I SH L++ G A Sbjct: 71 VTALMAVEKAFGIIVSSETYLYRQLIVLGGHIQSHALHLFCLALPDHFNAAGFADLAKLA 130 Query: 336 -------FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 + D+ E I G +HP +IGG+ + L++ L + Sbjct: 131 PDLLKLGLRIKAVGNDIQETIGGRLIHPINVKIGGMGQHIASNDLLRLQQSLKSILSDTI 190 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRAT-GID---FDVRKARPYSGYE 444 + K+ G L + GI D R A S + Sbjct: 191 RTVELFSSFATPGPPLPPPVYLAVKDENAPPLFGDMLTTSTGIAVKGSDYRSALKESVND 250 Query: 445 NFDFEIPVGGGVS---DCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 + + + + +R+ + + + + +Q + G ++ Sbjct: 251 HSNGKFSHFDDTNIAVGALSRLNMNIRLTEAAGKAFDQAKKKLVNGDMWQNNLAQAIELV 310 Query: 502 ERTLQHIETLIT-----HFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR 556 +E + + H + G + P E + EA +G+ + + + Sbjct: 311 FAVESAMEIIDSLLQTGHGHSATDGILSPKGEGTAITEAPRGVLIHSYSFNSRGYCVGAD 370 Query: 557 VRTPSFAHLQQIPAAI---------RGSLVSDL--IVYLGSIDFVMSDV 594 + TP+ + I + G + + + D +S Sbjct: 371 IITPTAINQAAIEQDLLFLARATEGAGEQEMKFKLEMLVRAYDPCISCA 419 >UniRef50_Q6ARY7 Related to cytochrome-c3 hydrogenase (NiFeSe), large subunit n=1 Tax=Desulfotalea psychrophila RepID=Q6ARY7_DESPS Length = 499 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 68/501 (13%), Positives = 130/501 (25%), Gaps = 141/501 (28%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G + L + + D G RG E++ + +S RI + + Sbjct: 11 TRIEGHLAVSLNVQNNRVKDAQCT-GEMVRGFEQILQGRSPLDAQQIVQRICGVCPVSHG 69 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYI--------------------- 319 + VLA E+ GI +P+ + R ++ I SH+ + Sbjct: 70 IASVLAQEQAYGIQLPENARLQRNIMLASNYIQSHITHFYHLSALDFIDITAILDYKGGD 129 Query: 320 ------------------------------STFIQDVGAMTPVFF----AFTDRQKIYDL 345 +++DV A R + L Sbjct: 130 AFLLAMQNWVKAELASKNLFPAAPFLPRYQGRYLKDVDFNITALRNYFIALEMRATAHQL 189 Query: 346 VEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRL-----ASYEKAALQNTIL 400 + G H A GG+ + + L + + + Sbjct: 190 IAIFAGKMPHMASIVPGGITEKVTTKKIIQCKSKLAQLKGFINNSYRNDLLAITAEFPSY 249 Query: 401 KGRSQGVAAYGAKEALEWGTTG-------AGLRATG-------------IDFDVRKARPY 440 + + L +G G L A I DV ++ Y Sbjct: 250 LSIGKSCGNF-----LSFGAFGDANLEKSPLLPAGALLQGKLEEVDDISIKEDVSFSK-Y 303 Query: 441 SGYENFDFEIPVGGGVS-----------------DCYTRVML-------KVEELRQ---- 472 S + +P R+M+ K++E Sbjct: 304 SSDSGREKTVPEPHKSGAYSWIKAPRYRGEAMEVGPLARLMVAQAKGNKKMQEASNAFLQ 363 Query: 473 ----SLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 528 SL L+ CL + E+ + +E L + E Sbjct: 364 KTDLSLTDLDSCLGR------HIARFIELEVIIEKCEEWMEQLRPDQPTAVDFNIPQQAE 417 Query: 529 SFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ---------QIPAAIRGSLVSD 579 M+EA +G +++T R P+ + + ++ G++V+D Sbjct: 418 GRGMMEAPRGALGHWVTI-EKQKIGRYECIVPTTWNCSPKDDKQIPGPVEQSLIGTIVAD 476 Query: 580 ------LIVYLGSIDFVMSDV 594 + S D ++ Sbjct: 477 KTNPLEAARIVRSYDPCLACA 497 >UniRef50_A1VCV1 Nickel-dependent hydrogenase, large subunit n=2 Tax=Desulfovibrio vulgaris RepID=A1VCV1_DESVV Length = 488 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 71/467 (15%), Positives = 120/467 (25%), Gaps = 101/467 (21%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G + + ++ ++VD G +RG E + + RI + + Sbjct: 25 TRIEGHLKAEVVVENGKVVDARLSGGM-YRGFETILRGRDPRDASQIVQRICGVCPTAHS 83 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF-IQDV--GAMTPVF---- 333 VLA+++ G VP+ + R ++ + SH+L+ QD G T F Sbjct: 84 TASVLALDEAFGAKVPNNGRITRNLIFGANYLQSHILHFYHLSAQDFVQGPDTAPFVPRF 143 Query: 334 --------------------FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWD 373 A R+ +++V G H +GG + Sbjct: 144 PKSDLRLSKELNKAGVDQYIEALEVRRICHEMVALFGGRMPHVQGQVVGGATEIPTKEKL 203 Query: 374 RLLREFLDWMPKRLAS------------YEKAALQNTILKGRS-QGVAAYGAKEALEWGT 420 + + Y+ K G Sbjct: 204 VEYAARFKKVRDFVEQKYVPVVYTIGSKYKDMFKVGQGFKAALCVGAFPLDNSGKKHLFM 263 Query: 421 TGAGLRATGIDFDVRKARPYSGYENFDFE-----------IPVGGGVSDCYT-----RVM 464 G + + FD K + Y Y F E IP Y+ R Sbjct: 264 PGVYAKGKDMPFDPSKIKEYVKYSWFAEETTGLNYKEGKTIPAPDKAG-AYSFVKAPRYD 322 Query: 465 LKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKER--------------------- 503 E+ R+ P G K R Sbjct: 323 GLSLEVGPLARMWVNNPELSPVGKKLLKDLFGISAKKFRDLGEEAAFSLMGRHVARAEET 382 Query: 504 --TLQHIETLITHFLQVSWGPVMPA----NESFQMIEATKGINSYYLTSDGSTMSYRTRV 557 L IE + VMPA E EA +G +Y+ S ++ Sbjct: 383 YYMLGAIEGWLKEIKAGEDTVVMPAVPASAEGTGFTEAPRGSLLHYVKVKDS-KIDNYQI 441 Query: 558 RTPSFAHL---------QQIPAAIRGSLVSD------LIVYLGSIDF 589 + S + + A+ G V D + + + D Sbjct: 442 VSASLWNCNPRDDMGQRGAVEEALIGIPVDDIQNPVNVARLIRAFDP 488 >UniRef50_Q50783 F420-non-reducing hydrogenase subunit A n=6 Tax=Methanobacteriales RepID=MVHA_METTH Length = 472 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 63/445 (14%), Positives = 128/445 (28%), Gaps = 79/445 (17%) Query: 221 PSAHGAFRIVLQLDG-EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 G +I + LD + D + RG EK + + RI + + Sbjct: 10 TRIEGHAKITVHLDDAGNVEDTRLHV-MEFRGFEKFLQGRPIEEAPRIVPRICGICDVQH 68 Query: 280 EMPYVLAVEKLAGIT---VPDRVNVIRVMLSELFRINSHLLYISTFI--QDVG------- 327 + AV+ G V +R +++ ++SH L+ + Sbjct: 69 HLAAAKAVDACFGFEPEDVLPAAYKMREIMNWGSYMHSHGLHFYFLAAPDFIAGKDRKTR 128 Query: 328 --------AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREF 379 A A R+ +LV A G +HP GG++ +L + L + Sbjct: 129 NVFQIIKDAPDIALQAIELRKNALELVRATGGRPIHPTSSTPGGISTELDDETQKDLLKK 188 Query: 380 ----LDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALE--WGTTGAGLRATGIDFD 433 ++ L +N L + Y + W +R + + Sbjct: 189 AQRNVELAEATLELAVPIFEENIDLVNSLGNIETYHTGLVKDGVWDVYDGIVRIKDKEGN 248 Query: 434 V-RKARP--YS--------GYENFDFEIPVGGGVSDC------YTRVML----------- 465 + R+ +P Y+ Y F G D +R+ + Sbjct: 249 MFREFKPADYADTIAEHVKPYSWLKFPYIKDLGYPDGVYRVSPLSRLNVADKMPDAAPKA 308 Query: 466 --KVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPV 523 +E R++ +Q L L + Sbjct: 309 QEHFKEFRENFGYAQQTL-------LYHWARLIELLACAECAADALEGDLSGEKFPDSLE 361 Query: 524 MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI---------RG 574 A + ++EA +G +++ T D + + + + + + + I G Sbjct: 362 RQAGDGVGIVEAPRGTLTHHYTCDENGLITKANIVVATIQNNPAMEMGIQKVAQDYIKPG 421 Query: 575 SLVSD-----LIVYLGSIDFVMSDV 594 V D + + + + D +S Sbjct: 422 VEVDDKIFNLMEMVIRAYDPCLSCA 446 >UniRef50_P13065 Periplasmic [NiFeSe] hydrogenase large subunit n=9 Tax=Deltaproteobacteria RepID=PHSL_DESBA Length = 514 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 71/480 (14%), Positives = 120/480 (25%), Gaps = 109/480 (22%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G +I +++ ++VD G RG E++ + RI + + Sbjct: 21 TRVEGHLKIEVEVKDGKVVDAKCSGGM-FRGFEQILRGRDPRDSSQIVQRICGVCPTAHC 79 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI-------QDVGAMTP-- 331 V+A + G+ V + R ++ + SH+L+ DV P Sbjct: 80 TASVMAQDDAFGVKVTTNGRITRNLIFGANYLQSHILHFYHLAALDYVKGPDVSPFVPRY 139 Query: 332 --------------------------VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVA 365 A R+ +++V G H +GG Sbjct: 140 ANADLLTDRIKDGAKADATNTYGLNQYLKALEIRRICHEMVAMFGGRMPHVQGMVVGGAT 199 Query: 366 HDLPRGWDRLLREFLDWMPKRLAS------------YEKAALQNTILKGRSQGVAAYGAK 413 + K + Y K + Sbjct: 200 EIPTADKVAEYAARFKEVQKFVIEEYLPLIYTLGSVYTDLFETGIGWKN-VIAFGVFPED 258 Query: 414 EALEWGTTGAGLRATGID--FDVRKARPYSGYENFDFEIPVGGGVS-----------DCY 460 + + G+ G D FD + + Y G+ FD P G S Y Sbjct: 259 DDYKTFLLKPGVYIDGKDEEFDSKLVKEYVGHSFFDHSAPGGLHYSVGETNPNPDKPGAY 318 Query: 461 T-----RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLI--- 512 + R K E+ R+ Q P G K R L I Sbjct: 319 SFVKAPRYKDKPCEVGPLARMWVQNPELSPVGQKLLKELYGIEAKKFRDLGDKAFSIMGR 378 Query: 513 -----------------------THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGS 549 + A E EA +G +YL Sbjct: 379 HVLVAEETWLTAVAVEKWLKQVQPGAETYVKSEIPDAAEGTGFTEAPRGALLHYLKI-KD 437 Query: 550 TMSYRTRVRTPSFAHL---------QQIPAAIRGSLVSDL--IVYLG----SIDFVMSDV 594 ++ + + + I A+ G V D+ V +G S D + Sbjct: 438 KKIENYQIVSATLWNANPRDDMGQRGPIEEALIGVPVPDIKNPVNVGRLVRSYDPULGCA 497 >UniRef50_B1I3L1 Nickel-dependent hydrogenase, large subunit n=6 Tax=Clostridia RepID=B1I3L1_DESAP Length = 485 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 72/459 (15%), Positives = 136/459 (29%), Gaps = 91/459 (19%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G +I ++LDG + D G RG E + + + T RI + + Sbjct: 13 TRIEGHLKIEVELDGNRVHDA-WSTGLLFRGLEIILKGRDPRDAQHITQRICGVUPISHG 71 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI----------------- 323 + VL ++ GI P ++R ++ I SH+L+ Sbjct: 72 ISSVLCLDDAFGIIPPKNGRILRNLIQGANLIQSHILHFYHLAALDYVKGPETAPFVPRY 131 Query: 324 -------QDVGAMTP--VFFAFTDRQKIYDLVEAITGFRM-HPAWFRIGGVAHDLPRGWD 373 DV A+ A R+K ++ + AI G ++ H F GGV + Sbjct: 132 EGDYRLPPDVTAVVVGHYIQALAMRRKAHE-MAAIFGAKIPHTTVFIPGGVTSTVTAEQV 190 Query: 374 RLLREFLDWMPKRLA-----SYEKAALQNTILKGRSQGV------AAYGAKEALE----- 417 + L + + A G AY + + Sbjct: 191 EAYAQKLRELISFIDNVYIPDVLAVAGAYEDWFSVGVGTKNLLSYGAYPLTDEKDPNGKN 250 Query: 418 -WGTTGAGLRATGIDFD---VRKARPYSGYE-----NFDFE----IPVGGGVSDCY---T 461 + T G + + +R+ +S YE FE V + Sbjct: 251 LFFTRGVYAGGSFMPMSADHIREHVTHSWYESKAGGKHPFEGETVPAVDKRGGYSWIKAP 310 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPP-----------KERTLQHIET 510 R E+ + Q + P+ D + L +E Sbjct: 311 RYESYSCEVG---ALARQWVGRDPQVIGLGDKAFSVMGRHFARAIETTKVAHAMLGWLEE 367 Query: 511 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL----- 565 L V + F + EA +G +++ + + + PS ++ Sbjct: 368 LEPGQPAFRPHDVPEKAKGFGLTEAPRGALGHWIEI-ENHVIKNYQAVVPSTWNIGPRDD 426 Query: 566 ----QQIPAAIRGSLVSD------LIVYLGSIDFVMSDV 594 + A+ G+ V+D L+ + + D ++ Sbjct: 427 KGVRGPLEEALVGTEVADPDNPIELVRIVRAFDPCIACA 465 >UniRef50_UPI0001C41F73 methyl viologen-reducing hydrogenase alpha subunit MvhA n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41F73 Length = 470 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 69/453 (15%), Positives = 137/453 (30%), Gaps = 92/453 (20%) Query: 221 PSAHGAFRIVLQLDG-EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 G +I + LD + D + RG EK + + RI + + Sbjct: 5 TRIEGHAKITVHLDEAGNVEDTRLHV-MEFRGFEKFLQGRPAEEVPRIVPRICGICDVQH 63 Query: 280 EMPYVLAVEKLAGI---TVPDRVNVIRVMLSELFRINSHLLYISTFIQD----------- 325 + AV+++ G + +R +++ ++SH L+ Sbjct: 64 HLAAAKAVDQIYGFNDDDILPAAYKMRELMNWGSYMHSHALHFYFLAAPDLVVPNGTRKT 123 Query: 326 -------VGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRE 378 A R+ D+V A G +HP GG++ +L L Sbjct: 124 RNVFQIIQDMPEVALQAIKIRRNGLDIVSATGGRPIHPTSSTPGGISTELDEETQADLLA 183 Query: 379 FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI-----DFD 433 + + + A+ IL+ G G R GI D+D Sbjct: 184 KAKENVELAQATIELAV--PILEE--------KIDLVKTLGYFGDT-RHCGIVTKDGDWD 232 Query: 434 -----VRKARP----YSGYENFDF--------------EIPVGGGVS--------DCYTR 462 VR Y+ Y N ++ + P + +R Sbjct: 233 VYNGKVRIKDKDGSIYTEYRNLEYKDIVAEHVKPYSWLKFPYIKELGYPEGIYRVAPLSR 292 Query: 463 VMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE-RTLQHIETLITHFLQVSWG 521 + + +++ + + + L + + A +PL + L E + Q G Sbjct: 293 INV-CDKMPDAAPLAQGALEDFRDRFGYAQYPLLFHWARLIELLASAEMAVDALEQDLSG 351 Query: 522 PVMP------ANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAI--- 572 P A E ++EA +G ++ T+D + + + + + + I Sbjct: 352 DKFPDALERTAGEGAGIVEAARGTLIHHYTTDDEGLITQANIIVATIQNNPAMEMGIQQV 411 Query: 573 ------RGSLVSD-----LIVYLGSIDFVMSDV 594 G V D + + + + D +S Sbjct: 412 AKDYIKPGVEVDDKIFNLMEMVIRAHDPCLSCA 444 >UniRef50_Q2W3I6 NADH-quinone oxidoreductase subunit C n=6 Tax=cellular organisms RepID=NUOC_MAGSA Length = 199 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 9/194 (4%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKL-PKPYVMLFDLHGMD 77 + + D + R G + +K +++V +LK + L D+ G+D Sbjct: 6 KDLGEYIAQALPQDVLGTEVNRCGELSLTVKAASIVKVMTYLKDDAGCLFKQLVDVCGVD 65 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERET 137 R F V YHL+S+ N+ + +KVA E VP+ T +F +A W+ERE Sbjct: 66 WPGR-------EQRFDVVYHLLSMKHNQRVRVKVATDEE-TAVPSVTGVFSSAGWFEREV 117 Query: 138 WDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKP 197 WD++G+ F HP+LRRI+ ++GHPLRKD+P ++ + E LT Sbjct: 118 WDMYGVLFSDHPDLRRILTDYGFEGHPLRKDFPLTGYVEMRYDDETKRVVYEPVKLTQDF 177 Query: 198 EEWGMKRGTENEDF 211 + E Sbjct: 178 RSFDFLSPWEGPGM 191 >UniRef50_Q00404 F420-non-reducing hydrogenase vhc subunit A n=10 Tax=Euryarchaeota RepID=VHCA_METVO Length = 474 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 65/447 (14%), Positives = 139/447 (31%), Gaps = 80/447 (17%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G ++ L D +D V RG EK E + +T RI + + Sbjct: 10 TRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPIFTPRICGICQVSHH 69 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI-QDVGAMT--------- 330 + AV+ + G+ +P+ N++R ++ + ++SH L+ D+ T Sbjct: 70 LASAKAVDNVFGVKIPETANMLRNLIHQASNVHSHALHFGMLASPDLMFPTTDDALKRNL 129 Query: 331 ---------PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 + + R+ +V+ + G +HP +GG + L L D Sbjct: 130 LGVAGENMDMIKDSIAMRKVGQTIVQKVGGRAIHPVTAIVGGQSKPLTEEERDELLTLSD 189 Query: 382 WM-----------PKRLASYEKAALQN----TILKGRSQGVA----------AYGAKEAL 416 + + + + ++ L N ++ + Sbjct: 190 NLVETAERTLNVGKEMVENLKEKDLMNLGYFESYHMGLVNNGAQDIYEGNIRVVNSEGKI 249 Query: 417 EWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVS----DCYTRVMLKVEELRQ 472 E+ A I VR PYS + G G + +R+ + +++ Sbjct: 250 EYEF-DPAEYANYITEGVR---PYSYLKFLALLKRRGEGKGAYRVNTLSRLNV-CDKMP- 303 Query: 473 SLRILEQCLNNMPEG-PFKADHPLTTPPPKERTLQHIETLITHFLQVSW----------G 521 I ++ + A P+ + L LI FL+ Sbjct: 304 -TPIAQKYYEEFVKTYGKPAHQPMLFHYARLIELLSSSELIRKFLEDDKIVDTDVRAEVD 362 Query: 522 PVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI------------- 568 P E +EA +G ++ +D + T + + + + Sbjct: 363 PKNITGEGVGCVEAPRGTLIHHFKTDDRGIINDTNLVVATVQNNPAMDIGVQKVAEKYIK 422 Query: 569 -PAAIRGSLVSDLIVYLGSIDFVMSDV 594 P + +++ + + + + D +S Sbjct: 423 TPEVAKPHILNHMEMVIRAYDPCLSCA 449 >UniRef50_A5UMA1 Coenzyme F420-reducing hydrogenase, alpha subunit, FrhA n=3 Tax=Methanobrevibacter RepID=A5UMA1_METS3 Length = 405 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 60/381 (15%), Positives = 120/381 (31%), Gaps = 20/381 (5%) Query: 224 HGAFRIVLQLDGEEIV-DCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMP 282 G +V+++D E IV RG EKM ++ + RI + + + Sbjct: 14 EGHAELVMEVDDEGIVTKGRYLSITPVRGLEKMVAGKNPETAPVLCQRICGVCPIPHTLA 73 Query: 283 YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDV----GAMTPVFFAFTD 338 V A++ I VP ++R +NS ++ D T V Sbjct: 74 SVEAIDHSLDIEVPKAGKLLRQATLAAHGVNSAAIHHFLIAPDFVPEEDFTTAVKSVSAV 133 Query: 339 RQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNT 398 R+ + +V+ + G +HP+ R+GG+A ++ L + L + + + Sbjct: 134 RKNVQYVVDMLAGEGIHPSDIRVGGMARNITSATKDKLIDRLKAFKPDMEKHVELMKSFI 193 Query: 399 ILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDV-RKARPYSGYENFDFEIPVGGGVS 457 + +G+ +A ++ + D+D + P + Y++ + +G Sbjct: 194 AARELPEGLGVV---DAPLLASSASYGNLDEFDYDNFSEVLPEAWYDDPE----IGKKAC 246 Query: 458 DCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQ 517 + K E R+ N + A H I+ L Sbjct: 247 TTIPLINGKNVETGPRARM--DKFNGFKDKGVVAQHVARAEEMLNNYNLTIDLLEQIDTS 304 Query: 518 VSWGPVMPAN----ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 +IE +G N + S P+ ++ + A Sbjct: 305 APARADYDDRGTGKLGIGVIEGPRGTNVHMANVKDS-KIQFYSAIVPTTWNIPTMGPATE 363 Query: 574 GSLVSDLIVYLGSIDFVMSDV 594 G + + D +S Sbjct: 364 GFHHKYGADVIRAYDPCLSCA 384 >UniRef50_A8UU10 Nickel-dependent hydrogenase, large subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU10_9AQUI Length = 419 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 63/408 (15%), Positives = 135/408 (33%), Gaps = 42/408 (10%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G R+ + +GEE+ D +I R E++ + + I RI L + Sbjct: 10 TRVEGLGRLSVLTEGEEVKDVRLEIFEPPRFFERLLKGKKPDQVIDTVARICGLCPVAYQ 69 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY-ISTFIQDVGAMTPVFFAFTDR 339 + V A E + + VP + +R + ++SH + + D ++ Sbjct: 70 LTAVEAFESIFELKVPRHIRELRRAIYCGEWVSSHSAHIFFLHLPDFYERESFLELMREK 129 Query: 340 QKIYD-----------LVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 +++ + ++E + G +HP R+GG ++ Sbjct: 130 RELLEAGLQIRKTGNSIIELLGGRHIHPVNIRVGGFYKIPSAPRIENTLAEIESALPFAE 189 Query: 389 SYEKAALQNTILKGRSQGVAA-YGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFD 447 + L + + + G E T G+ + + G++ + Y Y + Sbjct: 190 KALELFLNFDYPEMEKERIFVSLGNHEVYPI-TEGSAVSSEGMNIE---KNEYEEY-FVE 244 Query: 448 FEIPVGGGVSDCYTRVM-LKVEELRQSLRI------LEQCLNNMPEGPFKADHPLTTPPP 500 +++P + Y+R+ K E+ RI L Q L EG A +P + Sbjct: 245 YQLPHSTAL---YSRLKDGKAYEVGALARIYNNFGKLPQDLREKVEGVLPARNPFKSIIA 301 Query: 501 KERTLQHIETLITHFLQVSWGPVM------PANESFQMIEATKGINSYYLTSDGSTMSYR 554 + + + H L+ G E + EA +GI + + Sbjct: 302 RIVEVIYALREAKHILEKFEGGEPHVEYSIREGEGVGITEAPRGILYHRYRVNSKGEVVF 361 Query: 555 TRVRTPSFAHLQQIPA----AIRGSLVSDL----IVYLGSIDFVMSDV 594 + P+ + + + ++ D+ + + D +S Sbjct: 362 ANIVPPTSQNQRAMEEDVLLGLKTLKNGDIRVLAEKLVRNFDPCISCA 409 >UniRef50_B5I9E7 Ni Fe-hydrogenase III large subunit-like protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9E7_9EURY Length = 412 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 68/371 (18%), Positives = 103/371 (27%), Gaps = 57/371 (15%) Query: 229 IVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVE 288 + GE I VP +G+ R + +PY +RI + V Sbjct: 89 FKIATCGERIDSLVPYLGFKKREMLNKAIGKEPWEALPYVERITGQFSISYASLFYGLV- 147 Query: 289 KLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEA 348 GI PD + + EL R+++H+ + D ++ L Sbjct: 148 --FGIDCPDYL----LFAKELERVHNHIWVMHKLAGDASQKVANMHLAAITEEFLRLNLK 201 Query: 349 ITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVA 408 G R + R G E L + K + + I R Q Sbjct: 202 TLGHRYGMNFLRTG-------PRKYDKFHENLSELKKWFLETAEELSDSRIFIDRLQTTC 254 Query: 409 AYGAKEALEWGTTGAGLRATGIDFDVRK----ARPYSGYENFDFEIPVGGGVSDCYTRVM 464 + L G RA+G+ D RK Y Y P D +R + Sbjct: 255 ILKKLDILRNDGVGIPARASGVLRDARKIGIFKDLYGDYS------PPMESYGDSLSRFL 308 Query: 465 LKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVM 524 ++V+E+ +S ILE I Sbjct: 309 IRVKEVEKSFEILE--------------------------------SIELKECKVKRNAK 336 Query: 525 PANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYL 584 M EA G + +R PS IRG++ +D L Sbjct: 337 KDGFYEGMAEAPPGDIYMGVKI-EKGRVREIIIRPPSLVMYHAFSVGIRGNVFTDFPFAL 395 Query: 585 GSIDFVMSDVD 595 S SD D Sbjct: 396 DSFGAYFSDAD 406 >UniRef50_C8X545 Nickel-dependent hydrogenase large subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X545_DESRD Length = 486 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 57/453 (12%), Positives = 126/453 (27%), Gaps = 83/453 (18%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G +I + L+ + V RG E+ + + T +I + + Sbjct: 11 TRLEGHGKIDIFLNDDGTVQDSYFQVVELRGFEQFCQGRPVEELPRITPKICGVCPGAHH 70 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI---------------QD 325 M A + + G+T P IR + +SH+L+ Sbjct: 71 MASSKAADAVYGLTPPPAARKIRELFYNAHIAHSHILHFFALAAPDFMPGPEAGPGKRNI 130 Query: 326 VGAMT-----PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 +G + V +R + I G +HP GG+A + + + Sbjct: 131 LGLVDELGKGAVRRVLQNRGYAQKIQGLIAGHPIHPVASLPGGMAGPVSEKTRQEIAGMA 190 Query: 381 DWMPKRLASYEKAALQNTIL---KGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKA 437 + A + +N IL + R G + R D +R Sbjct: 191 SEIR-EFAQFALWFFENHILAQDRNRELLTGELFTHRTHYMGLVDSQGRVNFYDGQLRVV 249 Query: 438 RP-------YSGYENFD-----------FEIPVGGGVS---------------DCYTRVM 464 P + G + + + P + R+ Sbjct: 250 TPEGETMAQFDGSDYLEHLAETVLPWSYMKFPYLRDKGWHGLIDGADSGVYRVNSLARLN 309 Query: 465 L-------KVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQ 517 + +E +++ P A H + ++ + Sbjct: 310 VADGMATPLAQEAYETM---RAFYGGTPIHNTLAFHWARLVELMQAAEALVDLSQDPEVT 366 Query: 518 VSWGPVMPA---NESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR- 573 + +P E ++EA +G ++ T+D + + + + + + +++ Sbjct: 367 DTNVRSLPEGRPGEGVGVVEAPRGSLIHHYTTDANGLVKTVNLIVATVQNNAGMGMSVKK 426 Query: 574 -----------GSLVSDLI-VYLGSIDFVMSDV 594 V D+I + + D ++ Sbjct: 427 AAQGLIQDGAPDEAVLDMIEMGYRAYDPCLACA 459 >UniRef50_A6DBU3 Nickel-dependent hydrogenase, large subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBU3_9PROT Length = 386 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 51/405 (12%), Positives = 112/405 (27%), Gaps = 66/405 (16%) Query: 224 HGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPY 283 G + + I + +RG E+ + + + RI + G + + Sbjct: 12 EGEAELKIYQKDGIIDFVEI-FFWQYRGIEQYLVNRHFLDALVINPRICGICGHAHLLAT 70 Query: 284 VLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIS--TFIQDVGAMTPVFFAFTDRQK 341 A+E + + + ++R + S L I +H+ + + + + + A +K Sbjct: 71 AKAIENALNLKITKKAEILRDITSGLEIIQNHIKWFYLTLYPTQIKDKSYILKALNIVKK 130 Query: 342 IYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILK 401 I ++ I G H ++ GGV DL ++ L + + + + ++ L+ Sbjct: 131 ISKIIAIIGGQFPHNSYIIPGGVTCDLTNLDIIKIKNLLKKLREDIYTIIDENGKSHDLE 190 Query: 402 GRSQGVAAYGAKEALEWG---------TTGAGLRATGID-FDVRKARPYSGYENFDFEI- 450 + T + F Y +E+ Sbjct: 191 KFFEN---LPKNIGKSLNKFLVLGDNLFFKPNGTFTNVKEFSNNSFFKNVLYNEEYYEVG 247 Query: 451 ------------PVGGGVSDC-YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 + D YTR+ ++ E+ L I+ + + Sbjct: 248 PLARNLQNKTINTIYEKYQDSIYTRIFARLYEI---LLIINYLIKEI------------- 291 Query: 498 PPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRV 557 E L +IEA +G + + + + Sbjct: 292 -----------EDLDITQKSFLNYKKRTCGSGVSVIEAPRGSLIHKIKI-ENEKIKFYDI 339 Query: 558 RTPSFAHL--------QQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 PS +L A+ + + D V Sbjct: 340 VMPSQFYLSNGTKEKPSASQMALIREEIKFIDTIFKCFDICAVCV 384 >UniRef50_UPI0001B5108B coenzyme F420-reducing hydrogenase, alpha subunit n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B5108B Length = 464 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 125/448 (27%), Gaps = 63/448 (14%) Query: 205 GTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSY 264 +++ D + P G + L++ + + I R E + ++ Sbjct: 1 MSQSPDTSRILSVPALTRVEGETALRLRIHDRTVTEARLSIYEAPRFFEALLRGRAHTEP 60 Query: 265 IPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF-- 322 T RI + ++ AVE G+ V R+ +R +L I S L+I Sbjct: 61 PDLTSRICGICPVAYQLSACRAVEDACGVDVDGRLARLRRLLYCGEWIESQTLHIYLLHA 120 Query: 323 IQDVGAMTPV----------FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGW 372 +G + +Q +VE + G +HP R+GG R Sbjct: 121 PDFLGHDDVIGMSRSEPAHVRRGLRLKQTGNAVVELLGGRAVHPVSVRLGGFHRTPTRTE 180 Query: 373 DRLLREFLD----------------WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEAL 416 R L E L P+ + AL GV +A Sbjct: 181 LRPLAEGLRVALDDAWDTVQWVAGFDFPEAECEADLLALAEPGTYAIESGVPTVVPYDAT 240 Query: 417 EWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVML-------KVEE 469 + + + + + D + G R + E Sbjct: 241 HPAWSFPLRTFCDHVTETQVPHSTALHSRLDGRRHLTG----SLARYAVSGHLLSPTALE 296 Query: 470 LRQSLRI----LEQCLNNMPEGPFKADHPLTTPPPKERTLQHIET--LITHFLQVSWGPV 523 S + L + + +G + + +E I + P Sbjct: 297 AAASAGLDDPPLREGRDGTGQGTVCRNPFRSILVRAVEVFYAVEEALRIITEYERPASPY 356 Query: 524 MP----ANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVS- 578 +P + EA +G+ + D R+ P+ + I +R S+ + Sbjct: 357 VPVPARSGVGHGATEAPRGLLYHRYAFDREGRVTDARIIPPTAQNQGAIEEDLRRSVQAA 416 Query: 579 -----DLIV--------YLGSIDFVMSD 593 D + + D +S Sbjct: 417 LDRGQDSEAELTRLCERVIRNHDPCISC 444 >UniRef50_B3E9J3 Nickel-dependent hydrogenase large subunit n=5 Tax=Geobacter RepID=B3E9J3_GEOLS Length = 479 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 62/437 (14%), Positives = 123/437 (28%), Gaps = 64/437 (14%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G ++ + L + +D + RG EK+ + T RI + + Sbjct: 19 TRIEGHAKVFVNLAEDGSLDNAGLVVNELRGFEKILVGMEANRMPHITARICGVCPTAHH 78 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD---VGAM-------- 329 + A++ G+ P ++R ++ I+SH L + +G Sbjct: 79 IAASNALDHACGVVAPPAAMLLRELMYMGHIIHSHALSLFVLQGPDLVLGLDADPAIRNV 138 Query: 330 --------TPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLD 381 A R L E + G HP GG+ L +L+ +D Sbjct: 139 VGIVQANPEVAKKALRIRTVGQRLNEIVGGRGTHPVTSVAGGITFVLDSEKRAMLQSLVD 198 Query: 382 WMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAG-LRATGIDFDVR----- 435 + Q ++ + A A W R + I ++R Sbjct: 199 EGKQLAKDLAPVVKQL-VVTMLERHPAMLTDWVAPSWSVGTVLDNRVSLIQGNIRAVDEN 257 Query: 436 ----KARPYSGYE--------NFDFEIPVGGGVSDCYTRVML----KVEELRQ-SLRILE 478 P Y+ +F + VG + ++ ++Q S Sbjct: 258 GITQVEFPVQDYDKYMVESVVDFSYMKRVGFKKGGLLHDYRVGPLARINAMQQFSTEWAN 317 Query: 479 QCLNNMPE-GPFKADHPLTTPPPKERTLQHIETL---ITHFLQVSWGPVMPA----NESF 530 + + M + G + L K + I V+ +P + Sbjct: 318 REMEEMLKLGGYPCHITLFQAYAKLVEMIWAIERADDILRDPAVNGETRVPVKFQGGRAV 377 Query: 531 QMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ----IPAAIRGSLV--SD----- 579 EA +G + D + + + + I A + ++ SD Sbjct: 378 GHSEAPRGTLIHDYEIDEDGIVRAANLIVATQQNYAIINRSIEHAAKSHVIGKSDDQALL 437 Query: 580 --LIVYLGSIDFVMSDV 594 + + D +S Sbjct: 438 NAIEFSIRCYDPCLSCA 454 >UniRef50_P22320 NAD-reducing hydrogenase hoxS subunit beta n=5 Tax=Bacteria RepID=HOXH_RALEH Length = 488 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 62/455 (13%), Positives = 133/455 (29%), Gaps = 84/455 (18%) Query: 221 PSAHGAFRIVLQLDGEE-IVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 G ++V+ LD + +VD + RG EK + + + RI + + Sbjct: 11 TRIEGHGKVVVHLDDDNKVVDAKLHVVE-FRGFEKFVQGHPFWEAPMFLQRICGICFVSH 69 Query: 280 EMPYVLAVEKL------AGITVPDRVNVIRVMLSELFRINSHLLYISTFI---QDVGAMT 330 + A++ + +GI V +R + + SH I G Sbjct: 70 HLCGAKALDDMVGVGLKSGIHVTPTAEKMRRLGHYAQMLQSHTTAYFYLIVPEMLFGMDA 129 Query: 331 PVFF----------------AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDR 374 P R+ ++++A+ G +MH GGV ++L Sbjct: 130 PPAQRNVLGLIEANPDLVKRVVMLRKWGQEVIKAVFGKKMHGINSVPGGVNNNLSIAERD 189 Query: 375 L----------LREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEA-LEWGTTGA 423 + + +D+ L + ++ V A + Sbjct: 190 RFLNGEEGLLSVDQVIDYAQDGLRLFYDFHQKHRAQVDSFADVPALSMCLVGDDDNVDYY 249 Query: 424 GLRATGIDFDVRKARPYSGYENFD-----------FEIPVGGGVSDCYTRVML----KVE 468 R ID D R + ++ D + P + V + ++ Sbjct: 250 HGRLRIIDDDKHIVREFDYHDYLDHFSEAVEEWSYMKFPYLKELGREQGSVRVGPLGRMN 309 Query: 469 ELRQSL--RILEQCLNNMPE------------GPFKADHPLTTPPPKERTLQHIETLITH 514 + +SL + ++ L + + + L H L Sbjct: 310 -VTKSLPTPLAQEALERFHAYTKGRTNNMTLHTNWARAIEILHAAEVVKELLHDPDLQKD 368 Query: 515 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR- 573 L ++ P E ++EA +G ++ +D + + + Q + +R Sbjct: 369 QLVLTPPPNAWTGEGVGVVEAPRGTLLHHYRADERGNITFANLVVATTQNNQVMNRTVRS 428 Query: 574 --------------GSLVSDLIVYLGSIDFVMSDV 594 G + + + V + + D +S Sbjct: 429 VAEDYLGGHGEITEGMMNA-IEVGIRAYDPCLSCA 462 >UniRef50_B8HJR0 Coenzyme F420 hydrogenase n=14 Tax=Bacteria RepID=B8HJR0_CYAP4 Length = 433 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 57/410 (13%), Positives = 109/410 (26%), Gaps = 41/410 (10%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G + +Q+ + + I R E + + T RI + Sbjct: 12 GRVEGEGAMYVQIRDNRVREVKLKIFEPPRFFEAFLRGRQYSEAPDITSRICGICPIAYM 71 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF--IQDVGAMTPVF----- 333 M V A+E + G+ V + +R +L I SH L+I +G + + Sbjct: 72 MSAVQAMEDILGVAVAGGMRDLRRLLYCGEWIESHALHIFMLHAPDFLGYDSVIAMAGDY 131 Query: 334 -----FAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 ++ ++ I G +HP R+GG R L L+W A Sbjct: 132 PDLVQRGLRLKKIGNQIISLIGGRAIHPINVRVGGFYKLPSRQDLHSLVADLEWAVAAAA 191 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEW-----------GTTGAGLRATGIDFDVRKA 437 + + E+ G + + + Sbjct: 192 ETVRWVAAFP-FPDFAPDYEFVALHHGEEYPMNQGRLVSNKGLDIPIHQFYDQIEEQHRP 250 Query: 438 RPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTT 497 + G R L E+L + + Q + P + Sbjct: 251 HSTALQAQLKERGNYFLGP---LARFNLNFEQLTPRTQAVAQSVGMTPLCRNPFKSIIAR 307 Query: 498 PPPKERTLQHIETLITHFLQVSW---GPVMPANESFQMIEATKGINSYYLTSDGSTMSYR 554 + LI ++ + + A EA +G +Y D Sbjct: 308 SLEVMFAAEEALRLIDSYIPPAQSVVDYTVRAGCGHGCTEAPRGSLYHYYQIDQQGDILA 367 Query: 555 TRVRTPSFAHLQQIPAAI-----------RGSLVSDLIVYLGSIDFVMSD 593 ++ P+ + I + L S + + D +S Sbjct: 368 AQIAPPTAQNQSTIEQDLWQFVEEHIDLPENQLRSQCEQVIRNYDPCISC 417 >UniRef50_B5YL31 NADH-quinone oxidoreductase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL31_THEYD Length = 201 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 11/185 (5%) Query: 8 EPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPY 67 E A T + L + +L+ +F + ++ R G V +K ++ E+ +LK + Sbjct: 27 EGARATEESLK--IAYKLKEQFPEEVIEIKEFR-GQVSVIVKSNKIKEILKYLKNQQ-GF 82 Query: 68 VMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLF 127 L DL G+D R F + Y+L SI R I ++ + E + + T L+ Sbjct: 83 NHLQDLCGVDYSPEKPR-------FEIVYNLYSIWRRLHIRVRAKVNEETPELDSVTDLW 135 Query: 128 PNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQD 187 ANW+ERE +D+FGI F GHP+LRRI+MP+ W G+PLRKDYP + E + Sbjct: 136 EGANWHERECFDMFGIRFIGHPDLRRILMPEDWNGYPLRKDYPLKGKELWRGFREIIESS 195 Query: 188 LEMEA 192 E Sbjct: 196 SVEEN 200 >UniRef50_Q60338 Coenzyme F420 hydrogenase subunit alpha n=15 Tax=Euryarchaeota RepID=FRHA_METJA Length = 415 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 117/393 (29%), Gaps = 30/393 (7%) Query: 220 HPSAHGAFRIVLQLDGEEIVDCVPDIGYHH-RGAEKMGERQSWHSYIPYTDRIEYLGGCV 278 G +++L++D E IV+ + RG E M + + RI + Sbjct: 15 TTRHEGHAKLILEVDEEGIVNKAYYLNTTPVRGFETMLKGKPAEFAPIAVMRICGICQTT 74 Query: 279 NEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAM-------TP 331 + + A+E VPD ++R ++ R++SH L+ I D Sbjct: 75 HGIASCEAIENAIDCEVPDDGLLLRELVGIGNRLHSHPLHHLLTIDDFLKPDETDLKIEL 134 Query: 332 VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYE 391 + R+ +V+ + G +HP IGG+ ++ L L K Sbjct: 135 IKLIQRMRKVGQLVVDIVGGEGIHPPNIVIGGMRTNITERAKSRLYYALRQYEKDAYELY 194 Query: 392 KAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRAT--------GIDFDVRKARPYSGY 443 + +++ + + + G AT I++D P Y Sbjct: 195 EKYT--ELIERYLEEIGI------PDLGAHEYPYIATHTTYGDRYAINWDDVTEIPAQRY 246 Query: 444 ENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILE--QCLNNMPEGPFKADHPLTTPPPK 501 + + Y V E R+++ Sbjct: 247 YDDEEAKQTTTIQIPLYAGVPA---EGGPRARMVKFGNFREGGSAMDINIARAQENLGAV 303 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 R L+ ++ L + + + EA + N++ R+ S Sbjct: 304 YRALEILDELDLNGKTRAE-VEYKDGFGIGVHEAPRATNTHMAEVGKDGKIKSYRIIAAS 362 Query: 562 FAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 + + AI G V + + D S Sbjct: 363 TWNFPIVEKAIEGYPQQYAEVIMRAYDICASCA 395 >UniRef50_C6A4M9 NiFe hydrogenase II, catalytic subunit alpha n=4 Tax=Thermococcus RepID=C6A4M9_THESM Length = 416 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 61/411 (14%), Positives = 124/411 (30%), Gaps = 43/411 (10%) Query: 218 PNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGC 277 G + ++ E+ D I R E + + + RI + Sbjct: 7 EAFTRVEGNGGAEILIENGEVKDVKVKIFEGPRFFELLTLGRHYWDVPDLEARICAICYL 66 Query: 278 VNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTF--IQDVGAMTPVFFA 335 + + VL +E+ G+ VP+ + ++R + I SH L++ G + A Sbjct: 67 SHSVASVLGIERALGVNVPEEITLLRELGLLGELIESHALHLYLLVAPDLFGYADAIRMA 126 Query: 336 FTDRQKIYD----------LVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 + + + + E + G +H + GG + + + + Sbjct: 127 SKHGEVVKEGITIKAFGNYIRELLGGREIHGINIKPGGFGRYPTIEELEQIESQCEALLR 186 Query: 386 RLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRA-TGIDFDV-----RKARP 439 + L A A G L A G FD K P Sbjct: 187 PARRVVNIFAEQEPLG------ATVQHYIATNEYLYGDKLIAEDGEKFDYLEHIEEKTLP 240 Query: 440 YSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLR-ILEQCLNNMPEGPFKADHPLTTP 498 YS + ++ + RVMLK + L + E+ + G ++ Sbjct: 241 YSFAKQSRYKGNIFMVG--ALPRVMLKHDMLTPMAKHFYEEHKEKLASGYVSFNNLAQAI 298 Query: 499 PPKERTLQHIETLITHFLQVSWGPVMP----ANESFQMIEATKGINSYYLTSDGSTMSYR 554 + E T + G +P E +EA +G+ ++ D Sbjct: 299 ELLYALEKAKEVAKTLLDKGIEGENVPIEPQEGEGIGYVEAPRGVLVHHYRIDEKGNIAY 358 Query: 555 TRVRTPSFAHLQQIPAAI------------RGSLVSDLIVYLGSIDFVMSD 593 + + TP+ + + ++ + + L + + D +S Sbjct: 359 SNIITPTAFNHGIMELSLYEEARKRYGSSDETTFLQKLEETVRAFDPCISC 409 >UniRef50_A7BI76 Ni,Fe-hydrogenase large subunit n=1 Tax=Hydrogenobacter thermophilus RepID=A7BI76_HYDTH Length = 438 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 61/431 (14%), Positives = 128/431 (29%), Gaps = 60/431 (13%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G ++ L + I D I RG E++ E + + + T R+ + G + Sbjct: 9 ARVEGTAQLELVWENGRIRDARVRIPSS-RGIERVLEGRPFMDALVITPRVCGICGHAHL 67 Query: 281 MPYVLAVEKLAG-ITVPDRVNVIRVMLSELFRINSHLLYISTFIQD----VGAMTPVFFA 335 M V A+E G + + + ++R + + I +H+ + F+ +G F Sbjct: 68 MACVKALEDAIGHVRLSQKAKLVRDITLMVEMIQNHIKWFYLFVMPDFIRLGEKLDEFEP 127 Query: 336 FTDRQ---------KIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR 386 F ++ + ++ G H ++ GG+ + + + Sbjct: 128 FRGKRWKEAISVASEAIKVIAIFGGQWPHSSYAVPGGITSNFTSTDVSKALALVSRVEGF 187 Query: 387 LASYEK-------AALQNTILKGRSQGVAAYGAKEALEWGTTGAG-----LRATGIDFDV 434 +L+ +G ++G G L G F Sbjct: 188 FLESLVGMPVEAFLSLRKHGSWEGLKGDVKLFIDLCFKYGLERVGMSYGRLLTGGEVFPC 247 Query: 435 RKARPYSGYENF-DFEIPVGGGV-SDCYTRV-MLKVEEL-RQSLRILEQC---------L 481 ++G + I Y+ ++ + ++ + Q L Sbjct: 248 ITPGHFTGEKKLCSLNISKIREADGSPYSGAKRVRYNGMPYETGPLARQFLSGNPFVKRL 307 Query: 482 NNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSW-----GPVMPA---NESFQMI 533 + M + E T E L + + + P E ++ Sbjct: 308 HKMYGDSYMVRVLSRLLEVWELTSTVKEKLTSLYSFIKEPSCQIPFQKPERITGEGVGIV 367 Query: 534 EATKGINSYYLTSDGSTMSYRTRVRTPSFAH--------LQQIPAAIRG--SLVSDLIVY 583 EA +G + + S + R + TPS + L A+ G + + + Sbjct: 368 EAARGTLIHRV-SIEKGVITRYHIITPSVWNLGPRCEKYLGVAEKAMIGLENPIH-AEMV 425 Query: 584 LGSIDFVMSDV 594 L S D Sbjct: 426 LRSFDVCSVCT 436 >UniRef50_UPI0001C16F92 Nickel-dependent hydrogenase, large subunit n=2 Tax=Nostocaceae RepID=UPI0001C16F92 Length = 482 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 72/447 (16%), Positives = 140/447 (31%), Gaps = 76/447 (17%) Query: 221 PSAHGAFRIVLQLDGE-EIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 G +I + LD E + D + RG EK + + T RI + + Sbjct: 10 TRIEGHAKISIYLDDEGHVDDARFHVTE-FRGFEKFCVGRPFPEMPGITARICGICPVSH 68 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSH---LLYISTFIQDVGAMT------ 330 + +K+ +T+P+ +R +++ I SH ++S +G + Sbjct: 69 LLASAKTGDKILSVTIPEVATKLRRLMNLGQIIQSHALSFFHLSAPDLLLGMDSEPAKRN 128 Query: 331 ----------PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLP----------- 369 RQ +++E + G ++HPAW GGV+ L Sbjct: 129 VFGLIGVDPELARGGIRLRQFGQEIIELLGGKKIHPAWAVPGGVSDPLTTENRSHIQNRI 188 Query: 370 RGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATG 429 + + K L +Y+K A G+ G Sbjct: 189 PEAKSTVLNAIALFKKLLENYQKEAQTFGNFPSLFMGLVTPQGLWETYDGHLRFVDSGGN 248 Query: 430 IDFDVRKARPY----------SGYENFDFEIPVGGGVSDCYTRV---MLKVEELRQSLRI 476 I D +A Y Y + P+G S + R+ M +V L + L I Sbjct: 249 IVADKLEADNYHEFIGEAVQEDSYLKSPYYRPLGYPDSKDHCRLDSGMYRVGPLAR-LNI 307 Query: 477 LEQCLNNMPEGPFKADHP-------------LTTPPPKERTLQHIETLITHFLQVSWGPV 523 Q + + + +++HIE L+ +S Sbjct: 308 CSQIGTPLADQELREFRTYGSGTVKSSFFYHYARLIEILASVEHIEILLDDPDILSTRLR 367 Query: 524 MPAN----ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI--------PAA 571 A E+ + EA +G ++ D + + + + + + + Sbjct: 368 AAAGINRLEAVGVSEAPRGTLFHHYRIDENGLIQKVNLIIATGQNNLAMNRTVAQIARHF 427 Query: 572 IRGSLVSD-----LIVYLGSIDFVMSD 593 I+GS + + + + + D +S Sbjct: 428 IQGSQIQEGMLNRVEAGIRAFDPCLSC 454 >UniRef50_B9L8N1 Nickel-dependent hydrogenase, large subunit n=1 Tax=Nautilia profundicola AmH RepID=B9L8N1_NAUPA Length = 387 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 53/401 (13%), Positives = 126/401 (31%), Gaps = 69/401 (17%) Query: 231 LQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKL 290 L+++G++ +D V + + G E+ + +++ + R+ + G + V +EK+ Sbjct: 17 LKIEGDKKIDFVQIEFWQYHGIEEYLKNKNYMDALVINPRVCGICGHSHLHATVKVIEKV 76 Query: 291 AGITVPDRVNVIRVMLSELFRINSHLLYIST--FIQDVGAMTPVFFAFTDRQKIYDLVEA 348 + + + R + S L + +H+ + + + +F A KI + Sbjct: 77 FKAKISKKAQIFREVTSLLEIVENHIKWFYITIYPTQIKDKEYLFKAVKFSSKISKAIAI 136 Query: 349 ITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKR-LASYEKAALQNTILKGRSQGV 407 + G H ++ GGV D L++ + + + + L + L+ + Sbjct: 137 LAGQFPHNSYMVPGGVTCDPTYMEIMRLKDLIKEIKEEYIKEIMDENLTSHDLERFFEN- 195 Query: 408 AAYGAKEALEWG----TTGAGLRATGIDFDVRKAR------PYSGYENFDFEI------- 450 + + + D+ K + Y N +E+ Sbjct: 196 --LPKDIGKSLNKFLVLGESNIFKSNGDYKNVKEERNKSLSKNALYNNEYYEVGPLARMI 253 Query: 451 --------PVGGGVSDC-YTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPK 501 + SD YTR+ ++ E L +EQ L+ Sbjct: 254 INKNKNIKKIYDIYSDSIYTRMCARIYEPLLLLDYIEQKLSE------------------ 295 Query: 502 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPS 561 + P + ++ +EA +G + + S + + P+ Sbjct: 296 ----------VDLCEPSFLKPNVRNGKAIVAVEAPRGSLIHEI-SIKNEKIDYYNIVVPT 344 Query: 562 FAHL--------QQIPAAIRGSLVSDLIVYLGSIDFVMSDV 594 +L AA+ ++ + D + Sbjct: 345 QFNLASSTKENPSPAQAALMNEDIAYVDSVFRCFDICAVCM 385 >UniRef50_A0L610 Nickel-dependent hydrogenase, large subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L610_MAGSM Length = 432 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 67/423 (15%), Positives = 130/423 (30%), Gaps = 63/423 (14%) Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEM 281 G I + ++ E I C I R E + + + R+ + + + Sbjct: 11 RVEGHGGITVAVNEEGIQSCQMSIFEGARFYELLLKGKLARDAPGIVCRVCSICSAGHTL 70 Query: 282 PYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD--VGAMTPVFFAFTDR 339 V+A+E GI V D V R +L+ I SH L++ +G + + A Sbjct: 71 ASVMALESALGIHVSDTVQGFRTLLNLGQFIESHALHLFALAAPDYLGNASILQMASHFP 130 Query: 340 QKIYD----------LVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 +++ + E + G +HP +GG+ R+ + + + L + Sbjct: 131 EQVQKGLEIKRVGNLVQEVVGGRAIHPVNVIVGGLGRRP-------ARQAMQTLLQDLQN 183 Query: 390 YEKAALQNTILKGRSQG--------VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS 441 AL Q + +G TG L A+G + D+ A Sbjct: 184 ALDLALSLRGFVASLQNPEMGLQPPILVALRASGARYGLTGTHLAASGHE-DIPVAH--- 239 Query: 442 GYENFDFEIPVGGGVSDC-----------YTRVMLKVEE--LRQSLRILEQCLNNMPEGP 488 Y+ + ++ R M+ E ++ ++ E L P Sbjct: 240 FYQRVNEKVVRHSTAKQSTYAKKPFMVGALAR-MVHNGERLTGEAAQLREALLPAQPTTL 298 Query: 489 F-KADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMP-ANE--SFQMIEATKGINSYYL 544 A + E + E L + M E +E +G + Sbjct: 299 HNNAAQFVELVWALEEAVALCEALQEGPALIPPMTTMGFEGEQMGLAALEVPRGTLYHLY 358 Query: 545 TSDGSTMSYRTRVRTPSFAHLQQIPAAI---RGSLVS-----------DLIVYLGSIDFV 590 +G + + + TP+ +L + G + L + + D Sbjct: 359 GVNGEGVLTQADIITPTAQNLAHVERDFAHGVGYWLEQPQRQQEQLRLYLEMIARAYDPC 418 Query: 591 MSD 593 +S Sbjct: 419 ISC 421 >UniRef50_Q0CI54 NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial n=7 Tax=Eukaryota RepID=Q0CI54_ASPTN Length = 688 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 96/236 (40%), Gaps = 20/236 (8%) Query: 7 QEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK- 65 +Q + + V+++ ++ V FLK Sbjct: 19 PADKYQDKADSLHKYGQYIMACLPKHVQQFS-VWKDELVIYVPPTGVIPVMSFLKYHTAA 77 Query: 66 PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTK 125 Y + D+ +D R F V Y+L+S+ N I +K E VP+ T Sbjct: 78 EYTQISDITAVDFPTR-------DQRFEVVYNLLSVRYNSRIRVKTYADEARP-VPSVTG 129 Query: 126 LFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAK 185 LF A WYERE +D+FG+ F GHP+LRRIM + GHPLRKD+P ++ K + Sbjct: 130 LFEGALWYEREVYDMFGVFFSGHPDLRRIMTDYGFDGHPLRKDFPLTGYTELRYDEEKKR 189 Query: 186 QDLEM----------EALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVL 231 +E E T E G+ + + E +M + + PS A RI+ Sbjct: 190 IVIEPLELTQAFRNFEGGTAAWEPVGLGQDRKPESYMRKFVCGDSPSPVLARRILF 245 >UniRef50_UPI0001985C72 PREDICTED: similar to NADH dehydrogenase subunit 7 n=1 Tax=Vitis vinifera RepID=UPI0001985C72 Length = 238 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 82/155 (52%) Query: 273 YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPV 332 Y+ E + AVE+L VP R IRV+ E+ RI++H L ++T DVGA TP Sbjct: 81 YVSTMAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPS 140 Query: 333 FFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK 392 +A +R+K+ + E ++G RMH ++ R GGVA DLP G R + R+ E+ Sbjct: 141 LWASEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSSTQQFASRIDELEE 200 Query: 393 AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRA 427 + N I K R + A++A +WG +G LR Sbjct: 201 MSTGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 235 >UniRef50_B5YKI4 NADH-quinone oxidoreductase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKI4_THEYD Length = 177 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 8/156 (5%) Query: 20 PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGMDE 78 +I +R++F + R + +K+E++ ++ LK P+ + L DL +D Sbjct: 5 EIIKRIRDKFSDEVLWFICFR-DECSIVVKKEKIKDILSHLKNTPELEFDYLIDLTAVDY 63 Query: 79 RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETW 138 G F V YHL+SI I +K + E + + L+ ANW+ERE + Sbjct: 64 L------GFREPRFDVVYHLMSIKHKHRIRIKAQVPEQGCCIDSVADLWATANWFERECY 117 Query: 139 DLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARAT 174 D+FGI F GHP+LRRI+MP+ W G PLRKDYP ++ Sbjct: 118 DMFGIEFTGHPDLRRILMPEDWNGFPLRKDYPVKSE 153 >UniRef50_C7NPL2 Nickel-dependent hydrogenase large subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NPL2_HALUD Length = 439 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 59/422 (13%), Positives = 123/422 (29%), Gaps = 50/422 (11%) Query: 217 GPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGG 276 G G IV+ + E+ C + R E M +S+ T RI + Sbjct: 9 GDLVTRVEGHGSIVVNAEDGELDTCEWQVVESPRYFESMLVGRSFEESHHVTSRICAICS 68 Query: 277 CVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD--VGAMTPVFF 334 + + + A E G++V ++ +R + + SH+L++ VG + + Sbjct: 69 VSHTIASLQATEAALGVSVSEQDRRLRKLALYGETLQSHVLHLGYLALPDLVGEKSVLPL 128 Query: 335 A----------FTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMP 384 A + +L E +TG +H GG++ + L + L Sbjct: 129 ADTHEDELETVIDLHRLGNELTEVVTGRSVHAQRLVPGGISQLPEESELQALLDRLVNSW 188 Query: 385 KRLASYEKAA-LQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGY 443 +A + + E+ + ++ + P S Y Sbjct: 189 DAVAELADLLAVLADEFPAFERETEYISLTHPEEYAFAEGTIYSSDVG-----EIPVSDY 243 Query: 444 ENFDFEIPVGGGVS------------DCYTRVMLKVEELRQSLRIL--EQCLNNMPEGPF 489 + E V + R ++L + L+ P+ Sbjct: 244 RDVANEYVVEHSTAKFARHERESYMVGALARFNNNADQLAPRATEIADRFGLDAPVHNPY 303 Query: 490 KADHPLTTPPPKE--RTLQHIETLITHFLQVSWGPVMP-----ANESFQMIEATKGINSY 542 + +++ IE L+ L +P A + IE +G+ + Sbjct: 304 LNNVAQLVEVAHLLGESVRLIEALLDDGLTPQSNYHVPEIDPTAGQGIGAIEVPRGVLFH 363 Query: 543 YLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGS--LVSDLI---------VYLGSIDFVM 591 D + P+ + I + + D + + + D + Sbjct: 364 EYAYDDTGEVTEANCVIPTNQNHGNIQRDMETLVPTIVDHPEDEIKHSLEMLVRAYDPCI 423 Query: 592 SD 593 S Sbjct: 424 SC 425 >UniRef50_Q1PWG9 NADH-quinone oxidoreductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWG9_9BACT Length = 166 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 9/160 (5%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGM 76 +D +I +++ F G IK+E +++V +F KK + L D+ G+ Sbjct: 3 NDSIITLVKSHFPEAITDC-YDFRGELTFVIKKEHIMQVAEFFKKNEELECDYLSDVCGV 61 Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D + F V YHL S+ + + LKV + ++ + T T ++ ANW+ERE Sbjct: 62 D-------KIETNGVFEVVYHLYSMQKKHRVRLKVPVPSDNPTISTVTHIWKTANWHERE 114 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEF 176 T+D+FGI F GHP+LR+I+MP+ ++GHPLRKDYP + Sbjct: 115 TYDMFGIQFQGHPDLRKILMPEDFEGHPLRKDYPIDGRQP 154 >UniRef50_C8WGI5 Nickel-dependent hydrogenase large subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGI5_EGGLE Length = 430 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 60/416 (14%), Positives = 127/416 (30%), Gaps = 43/416 (10%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G + + ++ E+ ++ R E M + + + RI + + Sbjct: 12 ARVEGHGNVHVVIEDGEVKTVEMNVVEPARLFESMVRGRRFEEIPYISSRICGICSSSHV 71 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI--QDVGAMT-------- 330 + + A+E++ G+ V DR +R +L + +H ++ F +G + Sbjct: 72 VTDLKAIERVFGVEVTDRTRALRELLVYGSYLQNHASHLFVFAAPDFLGMPSVFPLAQTD 131 Query: 331 --PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 A + +L + G +HP +GG H++ L + +D Sbjct: 132 PELFEQALGLKALGNELCTKVGGRSIHPITAVVGGFTHEIEPAEYLELADKMDAAMDFAL 191 Query: 389 SYEKAALQNTILKGRSQG--VAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF 446 + + G +A + A GI FD + + + Sbjct: 192 EAVDLFRGFEVPDIATAGDMLAMVEDDYYPVECSDQAFFLNAGIVFDANEVQEHIEEHAV 251 Query: 447 DFEIPVGGGVS--------DCYTRVMLKVEELRQSLRI--LEQCLNNMPEGPFKADHPLT 496 + V RV + L Q+ ++ + L PF + Sbjct: 252 PHSAALLARVRETQSPYFTGALARVNASWQNLGQNAKVAAAKAGLRPPEANPFMNNVAQA 311 Query: 497 TPPP------KERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGST 550 + + E + + A + EA +G + LT D Sbjct: 312 VEIVDALDRCADLCRKLAEPGAIASSSLPVPFEVKAGRAVGFTEAPRGALFHDLTLDAEG 371 Query: 551 MSYRTRVRTPSFAHLQQIPAAIR---GSLVSD----------LIVYLGSIDFVMSD 593 + TP+ ++ + A +R LV+D + + + D +S Sbjct: 372 RVTHASILTPTAQNVANLEADMRLLAEKLVADGAAEDVVRLEIEKLVRAYDPCLSC 427 >UniRef50_A6Q3L3 Ni-Fe hydrogenase, large subunit HupV n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q3L3_NITSB Length = 403 Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats. Identities = 54/400 (13%), Positives = 110/400 (27%), Gaps = 35/400 (8%) Query: 223 AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMP 282 G + Q D + I D + H+RG E++ + + RI + G + Sbjct: 9 IEGEAFLEFQKDKQTITDVKV-LFPHYRGIEEILRGRDPWDALVINPRICGICGHAHLQA 67 Query: 283 YVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIST-FIQDVGAMTPVFFAFTDRQK 341 + +E + + + + IR + I +H+ + ++ Sbjct: 68 TAMVLESIFQVNITQKAKNIREITRFCEIIQNHIKWFYLVIFHELNIPYDFTKVHHLIVT 127 Query: 342 IYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILK 401 I L+ +G H ++ +GGV D + + + + + + Sbjct: 128 INKLLALFSGQWPHSSYCVVGGVTCDPTSLEIHQAKTLIQQIR---DQFIQLIGKLHDPL 184 Query: 402 GRSQGVAAY--GAKEALEWGTTGAGLRATGIDFDVRKARPYSGY---ENFDFEIPVGGGV 456 + + +E + R D + + + Sbjct: 185 NLTNDLQKLYRTLQEKELLLVGKSHDRFITFSQDSHVSNIKLLHGQKRKTKLTLIEENEQ 244 Query: 457 SDCYTR---VMLKVEELRQSLRILEQC--LNNMPEGPFKADHPLTTPPPKERTLQHIETL 511 Y + K E R+++Q FK IE + Sbjct: 245 KRSYAKNVTYNGKYYETGPLARLMQQTDPFVRYFHRRFKDSITTRIIARIYEVSLLIEKI 304 Query: 512 ITHFLQVSW------GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL 565 I H + M + IEA +G + T TP+ +L Sbjct: 305 IDHLATIDLSQPSVVESKMQDGTAIISIEAARGSLIHQATIH-QGKIETYNFITPTQWNL 363 Query: 566 --------QQIPAAIRGS---LVSDLIVYLGSIDFVMSDV 594 I AI G+ +++ + S D Sbjct: 364 SNGTSQNPSVIQKAIVGTSDEKIAN--LIFRSFDICSVCT 401 >UniRef50_Q58592 F420-non-reducing hydrogenase vhu subunit A n=22 Tax=Methanococcales RepID=VHUA_METJA Length = 418 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 60/404 (14%), Positives = 119/404 (29%), Gaps = 54/404 (13%) Query: 221 PSAHGAFRIVLQLD-GEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 G ++ + LD + D I RG E+ + RI + + Sbjct: 10 SRLEGHGKVTITLDENGKPKDVKLHI-TALRGFEQFVVGRPAEEVPRIVPRICGICQTAH 68 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI---------------Q 324 + V A++ G+ +P+ +R ++ I+SH L+ Sbjct: 69 HLASVKAIDAAWGVEIPEPAKKLRELMHIGNMIHSHALHFYFLAAPDFVLGPDADPAIRN 128 Query: 325 DVG----AMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 VG A A R+ +VEA+ G +HP GG A L L + Sbjct: 129 IVGVIDKAPDVAKQAIALRKFGQKIVEAVGGKAIHPVTGIPGGQAKRLTEEERDELLKDA 188 Query: 381 DWMPKRLASYEKAALQ-NTILKGRSQGVAAYGAKEA-----LEWGTTGAGLRA---TGID 431 D M + + + Q N + + + + LR G + Sbjct: 189 DQMIEYAKNGVELIKQLNEQYMEQIKTLGVIDTYYLGLVKDGKHNFYDDTLRFLSPDGKE 248 Query: 432 FDVRKARPYSGY------ENFDFEIPVGGGVSDCYTRVMLKV---------EELR----Q 472 K Y Y + P V Y + +V +E+ + Sbjct: 249 KVEFKPEEYLNYIGEYVVPYNYVKHPYYKKVG--YPEGVYRVGPLAMLNVCDEMETPLAE 306 Query: 473 SLRILEQCLNNMPEG---PFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANES 529 R + P + + E+ +E + A Sbjct: 307 EYRKEFLEIFGFPANQSLAYNHARLIELVEACEKAKILLEDNDITSDDIKADVEPKAGNG 366 Query: 530 FQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIR 573 ++ A +G+ + +D + + + + + ++ + AI+ Sbjct: 367 VGVVYAPRGVLIHNYETDENGIVVKANMIVATTHNVPTMEKAIQ 410 >UniRef50_A4GJ20 NADH-quinone oxidoreductase n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ20_9DELT Length = 161 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 8/164 (4%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGM 76 D +I ++ ++ R V +K++ E FL+ + ++ L D+ + Sbjct: 3 DKKIIERIKEQYASAVIDSHDFRGDQ-TVTMKKDCGNEFFQFLRDDSELAFIFLMDITAV 61 Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D + F V YH S+ N + +K+ +AE D + T + ANWYERE Sbjct: 62 DYLSK------KDERFEVVYHFYSLKYNHRLRVKIPVAEEDCVAESITPFWKTANWYERE 115 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE 180 WD++GI F HPNLRRI+M + +KGHPLRKDYP + Sbjct: 116 IWDMYGIKFRNHPNLRRILMYEEFKGHPLRKDYPINKRQPLIGP 159 >UniRef50_O28899 Methylviologen-reducing hydrogenase, subunit alpha (VhuA) n=2 Tax=Archaeoglobaceae RepID=O28899_ARCFU Length = 458 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 61/418 (14%), Positives = 129/418 (30%), Gaps = 52/418 (12%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G ++ + LD V+ RG EK+ I + ++ Sbjct: 9 SRIEGHAKVTIFLDSSGKVENAFFQATEFRGYEKILSGLPMEEVPRVVSTICGICRAIHF 68 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD--------------V 326 + A +++ G+ D ++R ML I H L + Sbjct: 69 TAALKAADQVFGVEASDAAKIVREMLLCAHFIEDHTLSLLALALPDFLSPEERNIFGVIR 128 Query: 327 GAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLL----REFLDW 382 R +++ + G +HP GG A L+ RE LD Sbjct: 129 NLGELGRELLRKRGYAVRILQILGGRNIHPVTALPGGWAKAPTDEELGLIERYSRELLDL 188 Query: 383 MPKRLASYEKAALQNTILKGRSQGVAA--------YGAKEALEWGTTGAGLRATGIDF-D 433 + + E A L+ R+ + Y ++ ++ LR +G ++ D Sbjct: 189 GYRMVEVLEAALDMGDGLELRAATLGTEKKGLVNLYDGEQVVKDEEGKEVLRFSGKEYAD 248 Query: 434 VRKARPYSG-YENFDFEIPVGGGVSDC--YTRVML-----KVEELRQSLRILEQCLNNMP 485 + + S Y P+G + R+ K E+ ++ + L N Sbjct: 249 IITEKSLSWSYSKLTEIKPLGEKLYVVGPLARLKTAELTPKASEIVKTYGVSNNLLYNHF 308 Query: 486 EGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLT 545 + + ++ + ++ P A E ++EA +G ++ Sbjct: 309 ARAVEIIYAAERLLELSQSYR--------GGRIQNEPQKVAGEGVGIVEAPRGTLIHHYW 360 Query: 546 SDGSTMSYRTRVRTPSFAHLQQIPAAI--RGSLVSD-------LIVYLGSIDFVMSDV 594 +D + + + + +++ I + SD + V + + D M+ Sbjct: 361 TDEKGIVRGSNLIVATTHNVRAINHVVGKVAERASDTRNLAEKVEVAIRAFDPCMACA 418 >UniRef50_A7NIW0 NADH-quinone oxidoreductase subunit C n=6 Tax=Chloroflexi (class) RepID=NUOC_ROSCS Length = 174 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 62/174 (35%), Positives = 91/174 (52%), Gaps = 9/174 (5%) Query: 18 DDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPK-PYVMLFDLHGM 76 + V+ L+ R G V ++ E++++V FL+ P+ Y L +L G+ Sbjct: 5 NPTVLARLQAALPDALLGSSEFR-GDLSVHVRPERIVDVARFLRDDPELRYHFLENLCGV 63 Query: 77 DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERE 136 D R F V YHL+S I LKV ++E + VP+ T+L+P AN++ERE Sbjct: 64 DYLGR-------EPRFEVVYHLLSFANRHRICLKVGVSERNPSVPSLTELWPGANYHERE 116 Query: 137 TWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEM 190 T+D+FGI F GHP L RI+MP+ W+GHPLRKD P A E + + Sbjct: 117 TFDMFGIVFTGHPCLDRILMPEDWEGHPLRKDVPLGAEEVAFTFNQDRIYAHKP 170 >UniRef50_A8M620 NADH-quinone oxidoreductase subunit C n=14 Tax=Actinomycetales RepID=NUOC_SALAI Length = 245 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 9/195 (4%) Query: 1 MTDLTAQEPAWQTRDHLDDPVIGELRNRFG--PDAFTVQATRTGVPVVWIKREQLLEVGD 58 + + E A + D V L + +A G + I+ E++ EV Sbjct: 56 VRPQRSIEAASRPYGGYFDEVADALEEAYPAFGEAIEKVVVDRGELTLHIRPERIAEVCQ 115 Query: 59 FLKKLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAEND 117 L+ + + + G+D G A Y L S+ R I L+ A++ D Sbjct: 116 VLRDDLALRFELCSSVSGVDYL------GADARRLHAVYQLTSMTYRRQIRLEAAVSVED 169 Query: 118 LHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFS 177 H+P+ T ++P A+W ERE +D+FGI FDGHP L RI+MP W+GHP RKDYP Sbjct: 170 PHLPSVTGVYPTADWQEREAYDMFGIVFDGHPGLTRILMPDDWEGHPQRKDYPLGGVPVE 229 Query: 178 PFELTKAKQDLEMEA 192 D Sbjct: 230 YKGAEIPPPDRRRSY 244 >UniRef50_C0QP83 Nickel-dependent hydrogenase, large subunit n=2 Tax=Hydrogenothermaceae RepID=C0QP83_PERMH Length = 428 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 56/411 (13%), Positives = 124/411 (30%), Gaps = 43/411 (10%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G I L + + D +I R E + + + ++ I T RI + + Sbjct: 9 TRVEGEGSISLFYENGTLKDVKLNIFEPPRFIEGILKGKEYYRIIDVTSRICGICPVAYQ 68 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQD----------VGAMT 330 + V A+E G+ V + +R + I SH +++ VG + Sbjct: 69 ISGVQAIEDAFGLKVSSEIEKLRRLYYFGEWIQSHAVHVFFLHLPDFLNKGSVFEVGKDS 128 Query: 331 PVFFAFT--DRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 P F + ++++ I G HP +GG + + L+ Sbjct: 129 PEFLKIGTIIKNAGSEIIQKIGGRVSHPVSISVGGFTKFADDDSLKSIIPLLEKALDLSV 188 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDF 448 K + + +E G + G +R + ++N Sbjct: 189 YALKRFSEFNFPDNEIPDIHFLSLEEEEYPILKGDIVSNKG----LRLTK--EEFDNVIK 242 Query: 449 EIPVGG---GVSDCYTR--VML----KVEELRQSLR-ILEQCLNNMPEGPFKADHPLTTP 498 E V + Y R ++ + + L + + ++ P + T Sbjct: 243 EYQVDHSTAKRAKLYGRDLYIVGPISRFNNSYEKLSYMALKSSKDIDLYPPIKNSFKTIL 302 Query: 499 PPKERTLQHIETLITHFLQVSWG------PVMPANESFQMIEATKGINSYYLTSDGSTMS 552 + +E I + + + EA +GI + + D Sbjct: 303 IRMVEIIHSLERSIDLIKDYRKESLKNADYTVKEGTGYGVSEAPRGILWHKYSFDSEGKI 362 Query: 553 YRTRVRTPSFAHLQQIPAAIRGSLV--SDLIVYLGS-------IDFVMSDV 594 + + P+ + + ++R ++ ++ L + D +S Sbjct: 363 KKADIVPPTSQNQDIMEVSVRNMIMNRENIEEILKTGEKVIRNFDPCISCA 413 >UniRef50_UPI0001926F1C PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein 3, (NADH-coenzyme Q reductase) n=1 Tax=Hydra magnipapillata RepID=UPI0001926F1C Length = 268 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 16/221 (7%) Query: 10 AWQTRDHLDDPVIGELRN--RFGPD-----AFTVQATRTGVPVVWIKREQLLEVGDFLKK 62 + D P L +F D + + T V I + ++ + FL+ Sbjct: 53 SSTAVSTQDSPTTTRLMEFGQFVSDSMPKFVQSAEVTEGDELQVLISPDGIIPILTFLRD 112 Query: 63 LP-KPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVP 121 + L D+ +D + +R F + Y+L+S+ N I +K E + Sbjct: 113 HTNAQFKQLMDITAVDWPSKPYR-------FEIVYNLLSVRYNTRIRVKTYTDELTP-LD 164 Query: 122 TFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFEL 181 + + LF +ANW ERE WD++G+ F HP+LRRI+ ++GHPLRKD+P ++ Sbjct: 165 SASSLFHSANWAEREIWDMYGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGFYEIRYDS 224 Query: 182 TKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPS 222 + + L + ++ ++ E + + Sbjct: 225 ELKRLVQDPVELAQEFRKFELQSPWEQFPKHRKTVAKLESA 265 >UniRef50_Q2J4F0 Nickel-dependent hydrogenase, large subunit n=4 Tax=Bacteria RepID=Q2J4F0_FRASC Length = 430 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 60/410 (14%), Positives = 118/410 (28%), Gaps = 39/410 (9%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G R+++++ + + I R E +++ T RI + + Sbjct: 13 TRVEGEGRLLIKITDGRVDEAHLKIFEPPRFFEAFLRGRAYTEPPDITARICGICPVAYQ 72 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLY--ISTFIQDVGAMTPVFFAFT- 337 M + A+E++ +TV +R ++ I SH L+ + +G + + A Sbjct: 73 MSALAAIEQICDVTVTGPPAALRRLIYCGEWIESHALHVFLLHLPDFLGYDSALHLAQDQ 132 Query: 338 ---------DRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA 388 ++ L+ I G +HP R+GG R L L+ Sbjct: 133 PALVKLGLTLKKAGNTLMTVIGGRAIHPVNARVGGWYRAPRRRDLTELVGQLEQARDIAR 192 Query: 389 SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI-----DFDVRKARPYSGY 443 + + + G G+ D+D + Sbjct: 193 DTARFTAALDFPEDELHQTFVALHQPGEYPVERGRIASTAGLDIAPADYDRHFTEEQVPW 252 Query: 444 ENFDFEIPVGGGVSDCY-----TRVMLKVEELRQSLR--ILEQCLNNMPEGPFKADHPLT 496 N + Y R L E L + R E L P+++ Sbjct: 253 SN---ALHSTLAAGGSYLTGPLARFALGAERLAPAARETAAEIGLRPPERNPYRSIIVRC 309 Query: 497 TPPPKERTLQHIETLITHFLQVSWGPVMP-ANESFQMIEATKGINSYYLTSDGSTMSYRT 555 S P A + + EA +G+ + T D + Sbjct: 310 IEMVHAADEALRIIADYTEPDPSALEAPPRAGTGYGVTEAPRGLLYHRYTIDHNGTILDA 369 Query: 556 RVRTPSFAHLQQIPAAIRG--SLVSDL---------IVYLGSIDFVMSDV 594 ++ P+ + + I +RG +L + + D +S Sbjct: 370 KIVPPTAQNQRPIEEDLRGVVERFMNLSEPELALRCERAIRNYDPCISCA 419 >UniRef50_Q28T74 NADH-quinone oxidoreductase subunit C n=7 Tax=Alphaproteobacteria RepID=NUOC_JANSC Length = 207 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 9/194 (4%) Query: 19 DPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLK-KLPKPYVMLFDLHGMD 77 + L + D + G V + Q++ +FLK + L D+ +D Sbjct: 6 KELAEYLSEKRSDDVVSTDVNAMGELSVTVAPAQMVGFIEFLKTDRTCRFSTLIDITAVD 65 Query: 78 ERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERET 137 R F V YH +S+ +N + ++ A+ E D +P+ + + P A WYERE Sbjct: 66 YPSR-------DRRFDVVYHFLSMYQNHRVRVRAAIREED-TLPSISGVHPGAGWYEREI 117 Query: 138 WDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKP 197 +D+FGI F GH +LRR++ ++GHPLRKD+P ++ + E +L + Sbjct: 118 YDMFGILFTGHADLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEELKRVVYEPVSLVQEY 177 Query: 198 EEWGMKRGTENEDF 211 ++ E + Sbjct: 178 RQFDFMSPWEGAQY 191 >UniRef50_A6QAV5 Ni-Fe hydrogenase, large subunit HupV n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAV5_SULNB Length = 433 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 55/423 (13%), Positives = 114/423 (26%), Gaps = 55/423 (13%) Query: 223 AHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMP 282 G + I D + G+ +RG E++ + + T R+ + + + Sbjct: 13 IEGEAELDYTFANGSIEDVRINFGF-YRGIEEILVGKDPRDALVITPRVCGICNHAHLIA 71 Query: 283 YVLAVEKLA---GITV--PDRVNVIRVMLSELFRINSHLLYISTFIQD-----VGAMTPV 332 V A+E G V + IR + +H+ ++ I + + Sbjct: 72 AVRALENGYASAGWEVVLSPKAKAIREFTLSCELLQNHIKWMYMTIFPNLERYLKIESSE 131 Query: 333 FFAFT---DRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLAS 389 +A I + G H ++ GGV D + + L+ + Sbjct: 132 NYAVKASYFSTTITKALAIFAGQWPHSSYAVPGGVTCDPTQLDIIQAQSLLEECVRFFEQ 191 Query: 390 YEK-AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRA-TGIDFD---VRKARPYSG-- 442 L+ + + G+ A G +D V P S Sbjct: 192 MLTGCTLEAYLSIESVSSLHHIEGDFGKLLHLLGSNGMAKKGQSYDRFIVFADSPLSPAG 251 Query: 443 ------YENFDFEIPVGGGVSDCYTR---VMLKVEELRQ------SLRILEQCLNNMPEG 487 D + V + ++ E+ S + + L+ + Sbjct: 252 KSIATSVSKVDTKYVVESEQKGSMAKAVSYKNRMYEVGPLARGMVSKEPIVKNLHKRYKD 311 Query: 488 PFKADHPLTTPPPKERTLQHIETLITHFLQVSWGP-----VMPANESFQMIEATKGINSY 542 + ++ E L + + + E +EA +G + Sbjct: 312 SMMTRVFARIHEVAQLLEKNREMLKSIRVDEPSCTLSDTLKLYEFEGTGTVEAARGSLIH 371 Query: 543 YLTSDGSTMSYRTRVRTPSFAHLQ--------QIPAAIRGSLV---SDLIVYLGSIDFVM 591 T + + TP+ +L A+ GS +D + D Sbjct: 372 RTTV-SNGKIANYEIITPTQWNLSHGDEKEKGIAVKAMVGSQSMEEADF--IFRTFDVCS 428 Query: 592 SDV 594 Sbjct: 429 VCT 431 >UniRef50_A9W1N1 NADH-quinone oxidoreductase subunit C n=9 Tax=Alphaproteobacteria RepID=NUOC_METEP Length = 219 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 10/190 (5%) Query: 23 GELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKP-YVMLFDLHGMDERLR 81 + GP TR G + ++ ++ +L+ P + D+ G+D R Sbjct: 29 ERIAGALGPAVTEWAITR-GELTLVVQGSDIVYALTYLRDEPACAFRCFIDICGVDYPQR 87 Query: 82 THREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLF 141 A F V YHL+S+ N + +KV VP+ +FP ANWYERET+DL+ Sbjct: 88 -------ARRFDVVYHLLSLRHNMRVRVKVQTDAATP-VPSAIPVFPAANWYERETYDLY 139 Query: 142 GITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWG 201 GI F GHP+LRR++ ++GHPLRKD+P ++ +A+ E LT + + Sbjct: 140 GILFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDQDEARVVYEPVKLTQEFRNFD 199 Query: 202 MKRGTENEDF 211 E D+ Sbjct: 200 FLSPWEGTDY 209 >UniRef50_Q9XBW8 HoxH n=1 Tax=Rhodobacter capsulatus RepID=Q9XBW8_RHOCA Length = 503 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 70/448 (15%), Positives = 128/448 (28%), Gaps = 77/448 (17%) Query: 216 LGPNHPSAHGAFRIVLQLDG-EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYL 274 GP G R+ + LD ++ + G E + E ++ R+ L Sbjct: 26 PGPARGETAGQGRVTICLDARGQVRQVQLHLLDLC-GVETLLEGRAIAEIPEAVQRLCGL 84 Query: 275 GGCVNEMPYVLAVEKLAGIT-VPDRVNVIRVMLSELFRINSH---LLYISTFIQDVGAMT 330 + + V A++++AG + +R ++ + SH L +++ +G + Sbjct: 85 CPVSHHLAAVKAMDRIAGYDRLTPTAEKLRRLMQYGQIVQSHAVQLYHLAEPDLLLGFDS 144 Query: 331 ----------------PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDR 374 R+ ++V AITG R+ A GG+ LPR Sbjct: 145 EPARRGLVDVARAFPQLATEGVLMRRFGQEVVRAITGGRLRGAGAVPGGMRRPLPRAARD 204 Query: 375 LLRE----FLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGI 430 LR +DW L E+ N A W + Sbjct: 205 QLRADVDQVIDWAAGALRVLERLHGTNPAFYD------HPPRPAATSWRWSAPSGAVDFY 258 Query: 431 D-----FDVRKARPYSGYENFDFEIPVGGGVSDC------------------YTRVMLKV 467 D D R A + + + R+ + Sbjct: 259 DGRLRARDARGATLFDAVPAAAYRGVLAEPSGPGGPHLRALGPETGWYRVGPLARLQVCD 318 Query: 468 EELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSW------- 520 + Q L P + + L H LI L Sbjct: 319 LLTSEKAETERQRL-LAPGDGKPLQGSVFHHGARLVELLHAAELIRDLLDDPELLGTDLM 377 Query: 521 -GPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRG----- 574 P E+ +IEA +G D + R + + + + + AA++G Sbjct: 378 ADRGAPQREAVGVIEAPRGTLLQRYEVDEAGRIRRCTLLLSTRNNSRAMDAALQGVAAQY 437 Query: 575 --------SLVSDLIVYLGSIDFVMSDV 594 L++ + V + + D +S Sbjct: 438 CDGRRVTEDLLAHIEVAIRAFDPCLSCA 465 >UniRef50_B5EQ52 Nickel-dependent hydrogenase large subunit n=10 Tax=Proteobacteria RepID=B5EQ52_ACIF5 Length = 432 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 64/414 (15%), Positives = 115/414 (27%), Gaps = 41/414 (9%) Query: 218 PNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGC 277 P G + L++ I I R EK E + + RI + Sbjct: 12 PVLARVEGEGALDLEVHDGRIQTLRLRIFEPPRLFEKFLEGREYQEIPDMVARICGICPV 71 Query: 278 VNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI--QDVGAMTP---- 331 +M V A+E + G V +R + I SH L+I +G + Sbjct: 72 AYQMSAVHAIEGIFGQAPGPWVRAMRRVFYCGEWIQSHSLHIHLLAAPDFLGYSSASEMA 131 Query: 332 ------VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK 385 V + +++ G +HP R+GG R +LRE + Sbjct: 132 RAHPDIVRRGLALQALGNEIIRFFGGRSVHPVGARVGGFHRAPSRAEAAVLREQVRAALP 191 Query: 386 RLASYEKAA--LQNTILKGRSQGVAAYGAKE--------ALEWGTTGAGLRATGIDFDVR 435 + L VA E G + + Sbjct: 192 GAEALVAWTAALNLPDDPQDFVSVALRHPDEYPMNEGRIVSSDGLDIPIADYESHFREHQ 251 Query: 436 KARPYSGYENFDFEIPVGGGVSD---CYTRVMLKVEELRQSLRILEQCLNNMPEGPFKAD 492 + + Y D + G ++ R+ + V E I N +A Sbjct: 252 EPHSTALYAALDGRPYLVGPLARLNLNLDRLHMPVREALGRTGIAFPSRNMFHSIVARAA 311 Query: 493 HPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMS 552 R L+ F+ V + EA +G+ + D + Sbjct: 312 EIHYALLETSRLLEDYTEPEAPFVPA----VPRVGIGYGCTEAPRGLLWHRYDLDAAGQV 367 Query: 553 YRTRVRTPSFAHLQQIPAAIR-----------GSLV-SDLIVYLGSIDFVMSDV 594 R+ P+ + ++ A +R G + + + + D +S Sbjct: 368 LHARIVPPTSQNQARMEADLRHSLETLGLDRDGETLRQQAEMVIRNYDPCISCA 421 >UniRef50_A8ZNU6 Hydrogenase large subunit HoxH n=62 Tax=Bacteria RepID=A8ZNU6_ACAM1 Length = 494 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 64/454 (14%), Positives = 122/454 (26%), Gaps = 89/454 (19%) Query: 221 PSAHGAFRIVLQLDG-EEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVN 279 G +I + LD E+ D + RG EK E + + T RI + + Sbjct: 11 TRIEGHAKISIYLDDAGEVTDARFHVTE-FRGFEKFCEGRPFWEMPGITPRICGICPVSH 69 Query: 280 EMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI---QDVGAMTPVFF-- 334 + A +++ + +P +R +++ I SH L +G + Sbjct: 70 LLASAKAGDQILAVHIPPAAEKLRRLMNLGQIIQSHALSFFHLSSPDLLLGWESDPAQRN 129 Query: 335 --------------AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFL 380 RQ ++++ + G ++HPAW GGV L +R L Sbjct: 130 VFGLMAAEPDLARSGIRLRQFGQEVIQHLGGQKIHPAWAVPGGVRSALTDQGREQIRAGL 189 Query: 381 DWMP-------KRLASYEK-------AALQNTILKG----------------RSQG-VAA 409 + KR + L R V Sbjct: 190 LEVRSTALSTLKRFKDLLEDHASEARIFGNFPSLFMGLINPKGLWEHYQGCLRFVDSVGN 249 Query: 410 YGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGG----GVS----DCYT 461 A A + D PY Y + G Sbjct: 250 IIADHLDPSQFQSFIGEA--VQTDSYLKSPY--YRPLGYPDQTPGLCRLESGMYRVGPLA 305 Query: 462 RVMLKVEELRQSLRILEQCLNNMPEGP---------FKADHPLTTPPPKERTLQHIETLI 512 R+ + R + +Q L + + + ER Q IE Sbjct: 306 RLNVCD---RMGTPLADQELQEFRQRGNGTVTSSFYYHYARLIEILACIERIEQQIEDPG 362 Query: 513 THFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQI---- 568 + + E + EA +G ++ D + + + + + + Sbjct: 363 LCQPPLRAQADVNQLEGVGVSEAPRGTLFHHYQVDATGLLQSVNLIIATGQNNLAMNRTV 422 Query: 569 ----PAAIRGSLVSD-----LIVYLGSIDFVMSD 593 + G + + + + + D +S Sbjct: 423 AQIARHYLHGPDIPESMLNRVEAGIRAFDPCLSC 456 >UniRef50_A5I2W3 Hydrogenase large subunit n=15 Tax=Clostridium RepID=A5I2W3_CLOBH Length = 471 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 66/447 (14%), Positives = 121/447 (27%), Gaps = 76/447 (17%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G I ++++ IVD G RG EKM E + I +T+RI + + Sbjct: 11 TRISGFLEIKVKVEDNIIVDGETS-GLLFRGFEKMLEGRPPLDSIYFTERICGICSTAHA 69 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFF------ 334 LA+E IT IR M+ I +HL F P Sbjct: 70 TASTLALENALNITPSINDIYIRDMMHGFEFIQNHLRQFYCFTVPSYVNLPNIRPIYPQE 129 Query: 335 --------------------AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDR 374 + ++ + + G H +GGV ++ Sbjct: 130 YSDFRLPKKLNERISSHYEEGIKYSRLAHEALAVLGGKAPHSHGIFVGGVTVNIDSYKLT 189 Query: 375 LLREFLDWMPKR-----LASYEKAALQNTIL------KGRSQGVAAYGAKEALEWGTTGA 423 ++ L + K L A G + + Sbjct: 190 KIQSILKAIKKFVNIYMLEDMNIIAQYYPEYFNLGNTYGNFMSFGVFDKYKDKNISYVKP 249 Query: 424 GL----RATGIDFDVRKAR-PYSGY--------ENFDFEIPVGGGVSDCYT-----RVML 465 G+ + D D Y+ Y + E V Y+ R Sbjct: 250 GVIINNKLENFDRDKITENIRYAWYVSDTIIENPIMNNEYTVDLKKEGAYSFVKAPRYAD 309 Query: 466 KVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKE--RTLQHIETLITHFLQVSWGPV 523 E+ R+ + + K+ L +I I Sbjct: 310 LPMEVGPLARL-KIAGEYTGGNSSMDRNIARVLETKKIINILYNISEKIQLLSNNQSAYN 368 Query: 524 MPAN-ESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ---------QIPAAIR 573 +P +I+ T+G S+++ + + TP+ ++ ++ Sbjct: 369 IPEGAFGEGLIDTTRGALSHFIKI-ENKTIKYYNIITPTAWNISPKDSKGTRGVGEKSLI 427 Query: 574 GSLVSDLI------VYLGSIDFVMSDV 594 GS + ++ + S D +S Sbjct: 428 GSKIDNIEKPVEIGRIIRSFDPCISCA 454 >UniRef50_C0QPV5 Hydrogenase large subunit n=2 Tax=Hydrogenothermaceae RepID=C0QPV5_PERMH Length = 457 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 60/447 (13%), Positives = 120/447 (26%), Gaps = 76/447 (17%) Query: 222 SAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEM 281 G ++ L + I D + RG E + E + + T RI + G + + Sbjct: 11 RVEGEIQLKLIWENRRIKDAFIQ-NLNFRGFEFILENRPPLDALVITPRICGICGHSHLI 69 Query: 282 PYVLAVEKLAG-----ITVPDRVNVIRVMLSELFRINSHLLYISTFIQD----------- 325 V A+E + I + + ++IR + + I +H+ + F+ Sbjct: 70 ATVKALEDIYRKNGYSIDISYKASLIRNVTHTVEIIQNHIRWFYLFVMPDFLKLEKDKDI 129 Query: 326 VGAMTP-----VFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPR----GWDRLL 376 + TP A +I ++ ++G H ++ GGV D + Sbjct: 130 LEDFTPLKGDKWKKALGISNEILKIISILSGQWPHTSYAVPGGVMSDPINTDIVEAISIT 189 Query: 377 REFLDWMPKRL--------------ASYEKAALQNT-------ILKGRSQGVAA----YG 411 + + + + + + K + + Sbjct: 190 DSVIRFFEEEIIGTDINTYLSVESFDQFMDKINKGDLRRFIELTFKNGMEKTGRAYDRFI 249 Query: 412 AKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYT---RVMLKVE 468 +A+ + FD + + + + + R Sbjct: 250 TVDAILPCVREGVKKKRSCKFDPSRIKEVDSHSFLTKDGTDFSRKRYSWAKAVRYDGLPM 309 Query: 469 ELRQ------SLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGP 522 E S L Q L + + L L++ + Sbjct: 310 ETGPLARKAVSKNSLFQDLISRFGDSYLVRIWARIDEIGRMALTLKSYLLSINTKEPSYI 369 Query: 523 VMP------ANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHL--------QQI 568 P E +IEA +G + L + + TP+ +L Sbjct: 370 KPPVKIENLEGEGTGLIEAARGSLLHRLEL-EKGKIKKYTIITPTTWNLGPRCERYHSPA 428 Query: 569 PAAIRGSLVS-DLIVYLGSIDFVMSDV 594 AI G S + L S D Sbjct: 429 EKAIIGLESSLKAEMILRSFDVCSVCT 455 >UniRef50_C0GED6 Nickel-dependent hydrogenase large subunit n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GED6_9FIRM Length = 427 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 60/439 (13%), Positives = 122/439 (27%), Gaps = 100/439 (22%) Query: 221 PSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNE 280 G + + L I ++ R + + + T RI + + Sbjct: 12 SRLEGEAALDVNLVNGTIESLKLNVFEPPRFFQNFLVGRKYRELPDITARICGICPVSYQ 71 Query: 281 MPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFI--QDVGAMTPVFF---- 334 M + A+E + V ++ ++R + + I SH+L++ +G + + Sbjct: 72 MTSINAIEHAFDVEVSEQTRLLRKLFALSQFIQSHVLHVFMLAAPDFLGYESVISMAEDF 131 Query: 335 ------AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPK--- 385 A ++ D+ I G +HP R+GG + + + E L+ + Sbjct: 132 PDEVKLALDLKRLGNDITALIGGREVHPVTPRVGGFSDLPSQEALKQAAERLEAALEGGM 191 Query: 386 ------------------------RLASYE----KAALQN-----TILKGRSQGVAAYGA 412 Y + N A Sbjct: 192 AAAKLVGGLSVPDMSWDFTSVALSDKKEYAVNGGRLVSDNGLDIDPADYREFLHEAHVSP 251 Query: 413 KEALEWGTT------GAGLRAT-GIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVML 465 AL + G R D KA+ + F P RV Sbjct: 252 SHALHSSLSGNSFLVGPLARVNLNFDRLSGKAKEAAALTGVSF--PSKNPFHSVDARVAE 309 Query: 466 KVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMP 525 V + +SL I++ +PE G ++ Sbjct: 310 LVHSIEESLEIIDALGKPVPE--------------------------------KNGYIVR 337 Query: 526 ANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSL-----VSDL 580 + EA +GI S+ + + + P+ +++ + +R + +SD Sbjct: 338 PGCGAAITEAPRGILSHSYCFNELGVVEEADIVAPTSRNVKNMEEGLRRFIPEHLDLSDE 397 Query: 581 IVY------LGSIDFVMSD 593 + + + D S Sbjct: 398 ELTLKCEMYIRNYDPCFSC 416 >UniRef50_D1CCD3 NADH-quinone oxidoreductase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCD3_THET1 Length = 179 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 92/185 (49%), Gaps = 16/185 (8%) Query: 6 AQEPAWQTRDHLDD-----PVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFL 60 Q P+ +D + P+I L+ V R G + + ++L+++ L Sbjct: 2 TQNPSSNPQDKQGNNEQPLPIINTLQEIIPGAIEEVTVFR-GETTIVVPVDRLIDIARTL 60 Query: 61 KKLPK-PYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLH 119 + P + L D+ +D RT R F V YHL SI N I +KV + + H Sbjct: 61 RDNPAMQFNYLVDVTAVDWLGRTPR-------FDVVYHLYSIPLNHAIRMKVRVD-DGQH 112 Query: 120 VPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW-KGHPLRKDYPARATEFSP 178 VP+ T L+ ANW ERET+D+FGI F+GHP+LRRI++P+ W G PLRKD+P Sbjct: 113 VPSLTGLWELANWGERETYDMFGIVFEGHPDLRRILLPEDWQDGFPLRKDFPIGGYGIWA 172 Query: 179 FELTK 183 E Sbjct: 173 AENVP 177 >UniRef50_A8XGA9 C. briggsae CBR-NUO-2 protein n=2 Tax=Caenorhabditis RepID=A8XGA9_CAEBR Length = 399 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 16/220 (7%) Query: 2 TDLTAQEPAWQTRDHLDDPVIGELR-------NRFGPDAFTVQATRTGVPVVWIKREQLL 54 + P T +D+ L VQ + I ++ Sbjct: 164 IETKTDAPKKPTIWKIDEKKRERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVV 223 Query: 55 EVGDFLK-KLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVAL 113 V FLK + L + GMD R +R V Y L S+ N + ++ Sbjct: 224 PVLSFLKGNHSAQFTNLTFITGMDVPTRKNR-------LEVIYALYSVRFNARVRVRTYT 276 Query: 114 AENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARA 173 E + + T +F A+WYERE +D++G+ F+ HP+LRRI+ ++GHP RKDYP Sbjct: 277 DEIAP-IDSVTPVFKGADWYEREVYDMYGVWFNNHPDLRRILTDYGFEGHPFRKDYPLSG 335 Query: 174 TEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMF 213 ++ + E + + ++ + E Sbjct: 336 YNEVRYDPELKRVVYEPSEMAQEFRKFDLNSPWETFPAFR 375 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.134 0.370 Lambda K H 0.267 0.0409 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,769,529,675 Number of Sequences: 3077464 Number of extensions: 182810222 Number of successful extensions: 434864 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1471 Number of HSP's successfully gapped in prelim test: 118 Number of HSP's that attempted gapping in prelim test: 430123 Number of HSP's gapped (non-prelim): 2106 length of query: 596 length of database: 1,040,396,356 effective HSP length: 135 effective length of query: 461 effective length of database: 624,938,716 effective search space: 288096748076 effective search space used: 288096748076 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 96 (41.6 bits)