31 c3ibgF_ Probab=99.72   E-value=1.8e-17  Score=139.24  Aligned_columns=181  Identities=18%

Q ss_pred             HHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCC--CCCCHHHHHCCCCCHHH
Q ss_conf             5203578887189997388887700589999999997799389996658898945763899--98898887627899889
Q batch____       517 LHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTN--NVNGLSEILIGQGDITT  594 (720)
Q Consensus       517 l~~~~~~~~~~~i~vtS~~~~eGks~~a~~lA~~~a~~g~rvLlID~d~r~~~l~~~~~~~--~~~gl~~~l~~~~~~~~  594 (720)
                      |......+..|+|.+ |...|-||||+|.|||.++|..|+|||+||+|+ .+.+|..|+..  ..+...+...+-.....
T Consensus         6 ~~~~~~~~~~rii~~-sGKGGvGKTTia~nLA~~La~~G~rVllvD~D~-~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~   83 (300)
T c3ibgF_           6 LQSILSQKTLRWIFV-GGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDP-AHNLSDAFGQKFGKEARLVDGYSNLSAMEI   83 (300)
T ss_dssp             SHHHHTCSSCCEEEE-ECCSSSSHHHHHHHHHHHHHTTSSCEEEEECCT-TCHHHHHHTSCCCSSCEECTTCSSEEEEEC
T ss_pred             HHHHCCCCCCEEEEE-ECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC-CCCHHHHHCCCCCCCCEEECCCCCCCHHHH
T ss_conf             778513788379999-688788789999999999998899599998889-988578818877676303114678620222


Q ss_pred             HCCCCCCCCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCC-------------------------
Q ss_conf             3001678986899569889998887161899999999985199999958874354-------------------------
Q batch____       595 AAKPTSIAKFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAV-------------------------  649 (720)
Q Consensus       595 ~i~~~~~~~l~vl~~g~~~~~~~~ll~~~~~~~~l~~lr~~yD~ViiD~pp~~~~-------------------------  649 (720)
                      ........++.....+...+.+.+.....++.+.+.  ..+||+||||+||-...                         
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~D~iiiD~pp~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  161 (300)
T c3ibgF_          84 DPNGSIQDLLASQDLAFSIPGVDEAMSFAEVLKQVK--SLSYEVIVFDTAPTGHTLRFLQFPTVLEKALAKLSQLSSQFS  161 (300)
T ss_dssp             CCCCCHHHHHTCCCTTSCSCCHHHHHHHHHHHHHHH--HHTCSEEEEECCSSTTTTGGGGHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHH--HCCCCEEEEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf             344543102100002356899899999999999964--079979999577887542233140688887766411235567


Q ss_pred             ------------------------------HHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCC
Q ss_conf             ------------------------------68999999769599981287225999999999999779977799970647
Q batch____       650 ------------------------------TDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIF  699 (720)
Q Consensus       650 ------------------------------~d~~~l~~~~d~~llvv~~~~t~~~~~~~a~~~l~~~~~~~~G~vln~v~  699 (720)
                                                    ..+.......+..++|.........+..+.++.+...|.++.|+|.|++-
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~i~~~~iv~N~~~  241 (300)
T c3ibgF_         162 ILGARGGLPGGQNIDELLQKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYGIDTHAIVVNQLL  241 (300)
T ss_dssp             TTGGGGSCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCTTTEEEEEEEESSHHHHHHHHHHHHHHHHHTCCEEEEEEEEEC
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
T ss_conf             77764103443214789999999999999999875311023310024652245999999999999728983379996010


Q ss_pred             CC
Q ss_conf             52
Q batch____       700 RR  701 (720)
Q Consensus       700 ~~  701 (720)
                      +.
T Consensus       242 ~~  243 (300)
T c3ibgF_         242 FP  243 (300)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             77