19 c1ii0A_ Probab=99.81   E-value=1.1e-20  Score=161.58  Aligned_columns=172  Identities=17%

Q ss_pred             CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCCCHHHHHCCCCCHHHHCCCCCCCC
Q ss_conf             88718999738888770058999999999779938999665889894576389998898887627899889300167898
Q batch____       524 AQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIGQGDITTAAKPTSIAK  603 (720)
Q Consensus       524 ~~~~~i~vtS~~~~eGks~~a~~lA~~~a~~g~rvLlID~d~r~~~l~~~~~~~~~~gl~~~l~~~~~~~~~i~~~~~~~  603 (720)
                      ..++.+.++|..+|.||||+|.|||.++|+.|+|||+||+|+..|.++- +++++...+.+++..-  ...........+
T Consensus       312 ~~~~rii~~sGKGGvGKTTvaa~lA~~lA~~G~rVllvd~Dpa~~~L~~-~~~d~~~~~~~~~~~~--~~~~~~~~~~~~  388 (550)
T c1ii0A_         312 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPALNNLQV-SRIDPHEETERYRQHV--LETKGKELDEAG  388 (550)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCTTEEE-EECCHHHHHHHHHHHH--HHHTGGGCCHHH
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC-CCCCHHHHHHHHHHHH--HHHHCCCCCHHH
T ss_conf             5881799980478774147999999998603896899988867743201-2656245568776765--332033100011


Q ss_pred             EEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC---------CCCCHHHHHHHHHCCEEEEEECCCCCCHH
Q ss_conf             689956988999888716189999999998519999995887---------43546899999976959998128722599
Q batch____       604 FDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPP---------ILAVTDAAIVGRHVGTTLMVARYAVNTLK  674 (720)
Q Consensus       604 l~vl~~g~~~~~~~~ll~~~~~~~~l~~lr~~yD~ViiD~pp---------~~~~~d~~~l~~~~d~~llvv~~~~t~~~  674 (720)
                      ..++..+..++++.++.....|.+.+.  +.+||+||||+||         ..............|++++|+..+.+...
T Consensus       389 ~~~~~~~~~~Pg~~e~~~l~~~~~~~~--~~~~d~vvvD~~ptg~~~~lld~~~~~~~~l~~~~~~~vviV~~pe~~~~~  466 (550)
T c1ii0A_         389 KRLLEEDLRSPCTEEIAVFQAFSRVIR--EAGKRFVVMDTAPTGHTLLLLDATTTPMMLLQDPERTKVLLVTLPETTPVL  466 (550)
T ss_dssp             HHHHHHHTTSHHHHHHHHHHHHTTTGG--GGGTSEEEESCCCCHHHHHHHHHCCCCHHHHHCTTTEEEEEEECSSHHHHH
T ss_pred             HHCCCCCCCCCCHHHHHHHHHHHHHHH--CCCCCEEEEECCCCCCEEEEECCCCCHHHHHCCCCCCEEEEECCCCHHHHH
T ss_conf             110000135889789999999999964--189819996078888439996188527877402258769996288566499


Q ss_pred             HHHHHHHHHHHCCCCEEEEEEECCCC
Q ss_conf             99999999997799777999706475
Q batch____       675 EVETSLSRFEQNGIPVKGVILNSIFR  700 (720)
Q Consensus       675 ~~~~a~~~l~~~~~~~~G~vln~v~~  700 (720)
                      ...+.++.|+..|.++.|+|+|++-+
T Consensus       467 ea~r~~~~L~~~gi~v~gvVvNr~~~  492 (550)
T c1ii0A_         467 EAANLQADLERAGIHPWGWIINNSLS  492 (550)
T ss_dssp             HHHHHHHHHHHTTCCCCEEEEEEEST
T ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf             99999999997599823899941106