Phyre 2 alignment of P36566 with d1p3da1

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Job Description | P36566
Confidence | 72.13% | Date | Thu Jan 5 11:53:21 GMT 2012
Rank | 376 | Aligned Residues | 43
% Identity | 21% | Template | d1p3da1
SCOP info | MurCD N-terminal domain | MurCD N-terminal domain | MurCD N-terminal domain
Resolution | 1.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 44 | . | . | . | . | . | 50 | . | . |  | . | . | . | . | . |  |  | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | K | L | R | V | L | D | A | G | . | G | G | E | G | Q | . | . | T | A | I | K | M | A | E | R | G | H | Q | V | I | L | C | D | L | S | A | Q | M | I | D | R | A | K | Q | A | A
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | V | Q | Q | I | H | F | I | G | I | G | G | A | G | X | S | G | I | A | E | I | L | L | N | E | G | Y | Q | I | S | G | S | D | I | A | D | G | V | V | T | Q | R | L | A | Q | A
Template Known Secondary structure |  | T |  |  |  |  |  |  |  | T | T | T | S | T | T |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  | S |  |  | S |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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