Phyre 2 alignment of P36566 with d2hmva1

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Job Description | P36566
Confidence | 48.55% | Date | Thu Jan 5 11:53:21 GMT 2012
Rank | 417 | Aligned Residues | 33
% Identity | 21% | Template | d2hmva1
SCOP info | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | Potassium channel NAD-binding domain
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 53 | . | . | . | . | . | . | 60 | . | . | . | . | . |  |  |  |  | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | G | E | G | Q | T | A | I | K | M | A | E | R | . | . | . | . | G | H | Q | V | I | L | C | D | L | S | A | Q | M | I | D | R | A | K | Q | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | G | L | G | R | F | G | G | S | I | V | K | E | L | H | R | M | G | H | E | V | L | A | V | D | I | N | E | E | K | V | N | A | Y | A | S | Y
Template Known Secondary structure |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  | T | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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