Reference sequence (query): batch____ Identities normalised by aligned length. Colored by: property
HSP processing: ranked Search cycle: 3
1 [ . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . ] 329
batch____ bits E-value N 100.0% 1:329 MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE
1 UniRef50_A1TYM2 DNA-directed RNA polymerase... 343 6e-93 1 72.6% 1:329 1:328 MQRSVHELLTPRTIDVKESSATRAKVTLEPLERGFGHTLGSALRRILLSSMPGCAVTEAQIDGVLHEYSAIEGVQEDVIEILLNLKGVAVKMNGRDDAELTLSKKGPGVVTAGDIKLDHDVEIANPEHVICHL-SENGEVNMRLRVARGRGYEPADQRGLDEDETRAIGRLQLDATFSPVRRVAYAVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDHEKEPERVEEEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLDNWPPASLRGD
2 UniRef50_A4YBV8 DNA-directed RNA polymerase... 333 5e-90 1 88.1% 1:329 1:328 MQGSVTEFLKPRLVDIEQVNSTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSSKEGVQEDILEILLNLKGLAVTIEGKDEAMLTLSKSGAGPVIAADITHDGDVTIVNPDHVICHLTGNN-DISMRIRVERGRGYVPASARAQTEDDDRPIGRLLVDASFSPVARIAYNVEAARVEQRTDLDKLVIDMTTNGTIDPEEAIRRSATILAEQLDAFVELRDVTEPELKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASLADD
3 UniRef50_Q1IS93 DNA-directed RNA polymerase... 332 1e-89 1 41.0% 4:327 2:325 ---LWKGFQKPKRldSESLTDKYGHFWAQPFERGFGTTIGNALRRVLLSSIEGAAITAVKIEGVLHEFQSIPGVVEDATDIILNLKQIPFRLNGDAPKAIYLRAEQPGIVTSGMIETDADVEILDKDVYIATI-SEGGKLDMEMRLKKGRGYVSADKNF---DEDLGLGFIPIDSVHSPVRKCNYSVEAARLGQITDYDKLSIELWTNGSVNPADALGLAAKLLKDHMNIFINFEEEIEASHAEDRKPenENLNRSVEELELSVRSYNCLKNANIQTIGELVQKTEAEMLKTKNFGRKSLNEIKEILASMGLSLGMKIDEHGNAVAP--
4 UniRef50_C9R8G2 DNA-directed RNA polymerase... 325 1e-87 1 45.9% 5:320 1:316 ----MLGIEKpvSVDSLAPTGDYGRFVIEPLVRGYGITLGNALRRVLLSSIPGAAVTMVKIEGVLHEFSTLPGVREDVVEIILNLRGLKIRMHTDEERILRIEAAGEREVRARDIIADADVEILNPDHYIASLAPEG-RLFMEMTVRRGRGYVPADRQRH----DHVIGAIPVDADFSPVKKVNYRVENAWVGQNADYDRLILEVWTNGCVRPEEAVSLAARILCEHFQLltSTGHLEKIMVEKEEDNKNRLLEMPIEELDLSVRSYNCLKRAGINTILDLTQRTEEEMMKVRNLGKKSLEEVKQKLAELGLSLKPSSEE---------
5 UniRef50_A4FPJ2 DNA-directed RNA polymerase... 322 1e-86 1 43.0% 21:329 16:323 --------------------ETRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSLRIDGVLHEFTTIPGVKEDVTDVILNLKELVVSSEEDEPVTMYLRKQGPGEVTAADIVPPAGVTVHNPDLHIATLNGKG-KLEIELVVERGRGYVPAVQNKQTGAE---IGRIPVDSIYSPVLKVTYKVEATRVEQRTDFDKLILDVETKPSITPRDAVASAGRTLVELfrELNVDAEGIEIGPSPAEADTIAAYAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKLKLVGLGLSLKDSPPGFDPSAAAAE
6 UniRef50_Q2JL74 DNA-directed RNA polymerase... 322 2e-86 1 38.4% 10:314 27:326 ---------ECVESHRDDNGVHYGKFALGPLERGQGITVGNALRRVLLSNLEGTAVTAVRIAGVTHEFSTVPGVREDVMEILLNMKELVLRSSSPETQVGRLVAQGPGEVTAEKLQLPSDVEVINPRHHIATLA-EGAILEMEFMIGRGHGYRAVD---YSDSKAMAIDFLQIDSVFMPVRKVNYAVEAARVGQFLEKDRLVLEIWTNGSLTPQEALSQAARILVGLFAPLQEV--SFDAPVPPKPDEDNQKNQIPIEELQLSVRAYNCLKRAQINTVADLLLYTEEDLLEIKNFGQKSAEEVVQALkrFGLTL---------------
7 UniRef50_D1CFF3 DNA-directed RNA polymerase... 321 2e-86 1 39.4% 3:329 20:342 --DSVIELTTP-KVECIGIADNYGRFSISPLAPGYGLTIGNALRRVLLSSLEGAAITSVQIEGARHEFMALPGVKEDVTDIILNIKRIRVRSYSDRPVTLRLEATGPKVVTAADIRPHADVDIVSLDQPIATLDSEDATLSMQLTVQKGRGYVPAESQ-----DFFEIGRIPVDAIYSPVTKVNYVVERTRVGQRTDYDNLIIEIWTDGTIAPGEALSQAASILVGQFQIIAAYANAEtiELPTETMSVPEVDNRSIDELGLSARTLNSLKRAHITTVGQVLSKTKDDLLSIRNFGDKSLHELEAKLKEFGY-LPSDLPEGAIENAPDD
8 UniRef50_B9MKF3 DNA-directed RNA polymerase... 317 3e-85 1 44.3% 5:329 1:323 ----MIEFQKpiRCEELSPDNKYGRYVIEPLERGYGITVGNALRRTLLSSLPGAAVTAVKIDGVLHEFSTIPGVLEDVPEIILNLKGLAIKMSSPGPKVMYIEAQGECEVKAKDIKADADIEICNPDHHIATL-NQDARLFMEITVNQGKGYVLAERNKQP---NQPIGVIPVDSIYTPVVKVNYKVENTRVGQVTDYDKLTMEIWTNGTIRPDEALTVAAKILIEHFNLFTDLSNIPTKIEtqEPPKRNKLLDMTIEELELSVRSYNCLKRAGINTVEDLVNKTEEEMMKVRNLGKKSLEEVIQKLHSLGLSLK--KSDSTPKEEEEE
9 UniRef50_B5EM99 DNA-directed RNA polymerase... 315 2e-84 1 54.8% 7:327 6:325 ------ELLRPQGVDVEVISARRARLALGPLERGFGHTLGSGLRRVLLSSLKGAAVTEVEIEGVLHEYSSIEGVQEDVVDILLNLKMLAVRAHGRGDAVVTLRKRGPGQMTGADIVSEHGIEVANPEQVIATLTR-DVELVLRLRIDEGRGYDAAATRRQSHE--KRIGVMALDASFSPVLRVSYLVENARVEQRTDLDRLILDVETNGVVDPVWAVQEAARIFRSQLGVLAGAETREIPEASQVqqSLTPLLIRPVDDLELTVRSANCLKAEDIFYIGDLVQKSEQELLKAPNLGRKSLNEIKEVLVAHGLTLGMRLDSWPPENLP--
10 UniRef50_Q16AB8 DNA-directed RNA polymerase... 313 5e-84 1 47.5% 3:328 4:329 --KNWAELIKPQQLDVKPGNdrQATVTAEPLERGFGLTMGNALRRVLMSSLQGAAITSVQIDNVLHEFSSVAGVREDVTDIILNLKGVSIRMEVEGPKRLSISAKGPGVVTAGDISESAGIEILNRDHVICHLDD-GADVYMELTVNQGKGYVSAEKNKP---EDAPIGLIPIDAIYSPVKKVSYDVQPTREGQVLDYDKLTMKVETDGSLTPDDAVAFAARILQDQLGIFVNFEEPESASRADEDdeFNPLLLKKVDDLELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLSGMGLHLGMDVEDWPPDNIED-
11 UniRef50_Q2S3N9 DNA-directed RNA polymerase... 312 1e-83 1 41.1% 8:328 6:328 -------LQMPEGVHVEEVSDSEGQFVMGPLERGYGVTIGNALRRVLLSSLRGLAITAVKIDGVQHEFSTIPGVTEDVADLILNLKEVRFKADEMQEGHLHLNLEGPGNWTAADieATAEYDVLNPDQHVATLA-EDAVVNVDLRVGYGRGYVPSEENK---REDDPIGVIAIDSIFTPIKNVNYEVKPTRVGQKIDYEELLLDVETDGSLTPEEAITQGASILRDHVSFFIqePVVEEQEVDEEVKRIRELLAQPVDELDLSVRSHNCLKAANIKTIGDLVRREEDEMLKFRNFGRKSLQELVEVLDERGLQFGMDVEEYLEEKKAS-
12 UniRef50_Q30Z68 DNA-directed RNA polymerase... 309 7e-83 1 38.1% 5:322 15:333 ----WSELVKPDQISreSADTMYGKFVCEPLERGYGTTIGNAMRRVLLASLQGAAFVAVKISGVQHEFTTIPGVLEDVTDIVLNLKQVRLAMDTEEPQHLELHVNKSGEVKAGDIKCNQHVMVLNADQHLMTLT-EDVELTFELEVRMGKGYVPADMHEGLSDE---IGLIALDASFSPVRKVAYTVEQARVGQMTNYDKLILEVWTDGSISPEDAIAYSAKIIKDQISVFINFDERISEQENEGrsDVNENLFKGIDELELSVRATNCLKSANISLVGELVQKSEGEMLKTKNFGRKSLDEIRRVLGEMSLDFGMKVDGFE-------
13 UniRef50_B9Y6F5 Putative uncharacterized pr... 308 1e-82 1 36.7% 5:317 3:320 ----MQKFERAkeVKEYVESDHYGKFVVEPLERGFGTTLGNALRRVLLSSLPGAAVYSIKVEGVYHEFTSIPGVEEDVTMMILNIKNLIMKIDDDESYTLRIAAKGPMTVTAGDIICPTGVEVLNKDLEIAHL-EEGATLEMELKARNGRGYISADGNKayQGSSQGIGTVYTDSIYTPIDRISYNVEPTRVGQDAKYDRLIFEIWTNGSITPQMSLALGSKILIDHLDLLTHVNEseSVMKDVNGESPKNMQSMAIEDLDLSVRSYNCLKRAGIQTVEELTQRSEEEMMRVRNLGKKSLKEVKDKIYELGLSFKSY------------
14 UniRef50_B3DVZ0 DNA-directed RNA polymerase... 307 4e-82 1 40.9% 1:328 1:332 MAIRLGRYEMPRSIVKDEtnSTFGKYIIEPFESGYGHTLGNSLRRILLSSLEGAAISSVKIEGVMHEFTTMEGVVEDVVDIVLNLKKVLIKMPDRQTRVFRVDVFKEGAVTAGDIQVDPGVEIVNPEQLICTLDKK-QRLLMELEVKVGRGFLLGEYNK---KQDQSIGVIPIDCLFSPVRHVKYTVENTRVGQRTDYDRLIFEIWTDGRIGPDEALVQSAAILQHHLDIFVQyfEKPKPPIKEEENRLRKILNMSVNEIELSVRAANCLNNANITTVGQLAMKTEAEMLKYRNFGKKSLNEIKEKLASLGLSLGMKFDPSLLDQTEE-
15 UniRef50_D1C2N3 DNA-directed RNA polymerase... 306 6e-82 1 38.7% 5:322 1:314 ----MLEIARP-RVQQTHAGVNYGRFEIEPLEPGYGITIGNALRRILLRSLPGTAIVRVRIADVWHEFSTIEGVREDVTEIVLNLKRVRLKALTerEGRASLYAQGEGVVRAGDIDWPGDVEVVNPEHVIATLDNDDARLEMDLVIARGRGYQPAETQ-----EIYTIGEIPVDAIFTPIEKVNYVVEHTRVGQMTDYDRLIIEIITDGTIEPADALSEAAQILVDHARLIADFNREPSEPEEEEDKTPSIVDNRPLAELGLSPRVLNALRSRQIERVGQVLSLPQEQLLSIRNFGPRSLQELRERLAEHGYTLAMDAEKKD-------
16 UniRef50_Q0EW63 DNA-directed RNA polymerase... 305 1e-81 1 47.5% 7:328 2:321 ------QLINPRHISIEEKVPGRakIVFEPLERGYGTTIGNSLRRMLLSSLPGAAVTSVLMDGVAHEYDSIKGVREDVMDIILSLKELDLRMEGDEAATISLEIKGSAIVTAADIKCPAGLSVLNPELILAHLND-DAHLKIEAVVEKGRGYEPATDREV---DERAVGSLLVDASYSPIRRVSTRVEAARVGQRTNYDKLIMEIETNGSLSPEEALNSAAKILEAQLAVFVDFEnsIVSEPEGPDDTLDNLLIQPIEHLDLSVRSMNCLKSDDVFRVGDLVQRSEQEMLRTPNFGRKSLNEIKEVLENMGLELGMDLPNWPPQEDAE-
17 UniRef50_B4U772 DNA-directed RNA polymerase... 305 2e-81 1 38.5% 5:318 1:311 ----MKEFIFPMKIYWEEKDKNYGRFVVEPLERGYGTTIGNALRRVLLSSIYGSAITAVKIEGVQHEFSTIEGVQEDVLQIIANLKNVRFDLKDSDLEILYLEKNAPGVVLASDIKTPPNVTIINKDAYIATINSANTTLKMEIRIERGKGYVMSDEMEQ----IGEAGWVVLDADFSPIKVAAFRVEATRVGDRTDYDKLTFELTTNGVVSPDTAIQQAVELIVKHMNMLTnsYEVPTLPEPMPPDELMEKLTFSIEELDISQRALNSLKRIGVTTIGELVQLTEDELKSSKNIGRKALTEIKEALKNMGFSLGMNI-----------
18 UniRef50_C8W7X1 DNA-directed RNA polymerase... 305 2e-81 1 43.7% 5:315 1:312 ----MSEFIRP-NVSVDEIGANVARVSVEPLERGYGDTLGNSLRRVLLSSLEGAAVEAIQIDGVQHEFTTVEGVYEDVTDIVLNVKGLVFRnnNSDEAEASISVDGPCTVTGADLDVPMGYELVNPAQHICALA-EGAHLSMRLRIGNGRGYVSGEDN---ERENDPIGFIHVDSIFSPVRRCAKAVEPCRVGRHTDYDRLVLEVETNGAISPREAVVEAANIINQHMSAFmdETQEEASIFAKADVEDDSELEKQVEDLDLSVRSYNCLKRAGIHSVRQLVDFSENDLLNIRNFGVKSIEEVKEKLESMGLSLK--------------
19 UniRef50_A9B437 DNA-directed RNA polymerase... 304 3e-81 1 38.3% 5:312 1:306 ----MLDIAMP-KLECVAAAENYGRFKIEPLDPGYGHTLGNALRRVLLSSIPGAAVIKIKIDGIFHEFSPIQGVREDATEIVLNVKGIRLRSYAERPVKMILSKTGPGVVRASDIECPSNVEIVNPDHYIATLDSSDARLDMELTVERHRGYLPAE-----NRDPVPIGEIPVDAIFTPVHKVNYVVEHTRIGGMTDFDRLLLEIWTDGTVKPGDALSYAAQVLVQYSSIirFDDEQEQVGDANGLVIPSEIYDMPIEDLDLSTRTYNCLKRADITKVGQVLEMDEKQLLAVRNLGQKSMDEIREKLIERNL-----------------
20 UniRef50_B2UL53 DNA-directed RNA polymerase... 304 3e-81 1 40.4% 8:319 20:336 -------FEVPSRLEKIenDANHLTFVAEPFENGYGHTLGNSLRRVLLGSLEGAAITSVRIAGAQHEFSSLPGVVEDVTEIVLNLKKVKFKHNGKEPRLLSLRVHKQGVVTAADIADDTVYQVVNPDQIICTL-DQDTMFECEFQVRVGRGFATGDENKVP---DMPIGVIPIDSIFSPVTRVKYSVQNTRVGQMTDYDKLILEVWTDGRIAPADAMLQASAILRHHLDVFVNYDDKQVNfqDEETARLRKLLNMSVNEIELSVRAANCLNNANITTVGQLAMKSESEMLKYRNFGKKSLNEIKDKLLELGLSLGVQVD----------
21 UniRef50_B8G1Z4 DNA-directed RNA polymerase... 303 5e-81 1 43.5% 5:314 1:310 ----MLEIEKPKIECVERTDDnyAKFVVEPLERGYGITLGNSLRRILLSSLPGTAVTSVKIEGVLHEFSTVPGVLEDVTDIILNLKSLALKGHTDEPKVLRLEAEGEGVIKAGDIITDADIEILNPDLKIATL-DKDGRLFMEMTAERGRGYVSADKNK---KPDQAIGIIPIDSIFAPIYKVNYTVEDTRVGMVTDYDKLTLEVWSNGSITPEEATSLAAKILSEHLRLFIGLTDKLNnmVEKEEEAKDKILEMTIEDLDLSVRSYNCLKRAGINSVEELTQKTEEDMIKVRNLGRKSLEEVESKLKELGLGF---------------
22 UniRef50_Q7UIC5 DNA-directed RNA polymerase... 303 7e-81 1 41.5% 7:322 11:329 ------ELPSSLEVDRDSLTQTYGKFSAEPFERGFGASIGNSMRRVLLSSLVGSAVTQIKIRGAQHEFTTIPGVLEDVTDIVLNVKSLIVNSNTDSTRVITVERNTAGVVTGADVQTDADVEIINKDHVICTLTD-DVPFMMEMVVETGRGYVPSTEH---SSVDHEIGIIPIDAVFSPIVRVRYEVEATRVGQKTNYDRLNLEIWTDGTINPEMALTEAAKILRKHLNPFVQYRElaRGGAGSPEAQLEAKLNMTLADLRLSVRANNCLESENIMTVRDLVQRTEDSLLEVRNFGDTTLNEVREKLSQYGLHLGMRVPNQP-------
23 UniRef50_D1B5U6 DNA-directed RNA polymerase... 301 2e-80 1 46.5% 13:328 7:339 ------------EIIVEEVTPSHGRVVLEPLERGYGTTLGNALRRVLLSSIPGAGIVAVRVDGVLHEFSTIPGVREDVIELLLNLKHVPVRVSGPGtkVLRLEAEGPKVVRAADIQGDADVEFVDPEAVICTL-DEGHRVSMDLYIERGVGYAPIDRPRPS---YLPVDALLIDAIFSPVKRVRYEVQDVRSGQRTDYDRLVLEVWTNGVVSFRDAVAEASSILSGYFRGLSTSLWGQsqEVPAVCGEDDSVLSRPIKDLELSVRSENCLLRGGIHRIGDLVSRPKEELLKIRNLGKISLREIEEKLGKFGLSLKGEEPSGEADQAED-
24 UniRef50_C1SPG1 DNA-directed RNA polymerase... 301 2e-80 1 44.7% 7:319 8:322 ------EIIKPRKIevGEVTDRYGEYVAEPYEKGFGITIGNALRRVLLATIEGTAVVGVKIDGVSNEFATLEGVYEDVVDILMNIKMLDLKLHTHETRRVYIKKTGEGPVTAGDITGDTMVEILTPDQHICTITDPNKELNMEFVVQRGIGYVPAEE---LEKDYDEIDMLSVDAVFTPIKKVNYHVDNARVGQSTDYDRLTLEVETDGSINPEDAIGFAAKIIKDQMNLFINFdeVKQDEEENQNDQLLDLLDKSIEELELSVRAYNCLKNANIKTLAELCMKTDAEMLKTKNFGRKSLEEIKKVLQELGLSLGMDLE----------
25 UniRef50_Q1AU56 DNA-directed RNA polymerase... 301 2e-80 1 42.1% 11:314 7:308 ----------PPRFRVEEEDERHGIFVAEPLPRGLGHTLGNALRRVMLSGLPGAAVTKLRIEGVQHEFSTIEGVREDVVDIILNVKQLKFRLERDEPIELQISKDGPGEVRGSDIELKADVEVVNPDAYIASL-SEGGHLDMTLTVERGQGYVPAEQNK---SDADPIGVIAVDSLFSPVEKVQYRVSETRAGARVDLDALTLEVFTDGRLGPREALREASRKLIDFFGLFAEGYqgAAEEPGRSGGRPVITDERPIEDLELTVRSYNCLKREGVDTIGQLATMTEEELMNIRNLGMKSVDEIRSKLEEYGYTL---------------
26 UniRef50_B5YDX0 DNA-directed RNA polymerase... 301 3e-80 1 40.9% 8:315 2:307 -------IEENVRVIVEKRSEDYGRFVIEPLERGYGWTIGNALRRILLSSIEGAAVVSVKIDGVRHELEVLPGLKEEILEVLMNLKKLVVKIEDNNSHILEIDTRGPKVVTAADFIVPSNVKIVNPDLVIATLV-EDMPFHMEVEVKKGKGYVSAEENK---DQNYPIGVLVLDSIFSPVKKVSYTVEKTRVGRRTDLDRLILEIWTNGSISPEEAFREASRILMEYFRLLNEKEFQLPYEEVKPENTYLEEEKktLEDLGLSTRAYNSLRHAGIHTIEDLLSKTREELMKIKNFGQKSLQELEEKLREKGLSLK--------------
27 UniRef50_B8G8K2 DNA-directed RNA polymerase... 301 3e-80 1 36.2% 1:329 1:325 METLELSLITP-RVTLLAAAENYGRFAIAPLQRGHGTSLGNALRRVLLSSIPGAAVTRIKITGVIHEFTAIPGVVEDGTQLVLNVKGIRLRSYSDRAVALQLVKQGPGPVFAGDIDAPSTVEIVNPQHYLCTIDDEHTTLEMQLTVERGRGVQLADTVSG-----MPIGEIAVDALFSPIPRVNFLVEEIGGDPLTGYDRLIIEIWTDGTIKPGDALSHAAQILTQYFSRIvnQPEESEQQPTLPPPIPDEIANRTIDELGLSTRTYNSLRRADIQTIGQLLRLDDRGLMSIRNLGAKGIEEIHQRLAALGYRSGETTSGHLPDTTNQN
28 UniRef50_C4XLK3 DNA-directed RNA polymerase... 300 7e-80 1 41.7% 2:322 12:332 -SRNWTELVKPEVlkDPSSTETFGRFVCEPLERGFGTTLGNALRRVLLSSLQGAAIVAARIEGVQHEFSTIPGVIEDVTEIILNLKQVRLAMATDEPQRLTLLAKEKGEVRASAIQGNHNVSVLSEDVLIATL-SEDRDFRIDLEVRMGKGYVPADMHEGLESE---IGLILLDASFSPVKKVAYTIEQARVGQMTNYDKLVLEVTTDGSIAPEDAISYSAKILKDQLTVFINFDEKESEAEKNRRRDDIEllFKSIDELELSVRATNCLKSANIQTVGELMQKTEHEMLKTKNFGKKSFEEIRRVLEDMGLEFGMRIENFD-------
29 UniRef50_Q5HAU5 DNA-directed RNA polymerase... 300 7e-80 1 40.9% 1:328 32:366 MSDHWNKLTKPSSIKVVNHGnnKADLIIEPLESGFALTLGNALRRVMMSSLRGFAVYGVEIENVLHEFTSISGVREDVTDILLNISMIRLKLSGMDNKVLSLKVKGPCEVRSGMIADTPDCTILNKDLLICTL-DQDVDFNIKMYVNSGKGYVPAVKRKSINKfdVPVNFIATNALYSPIKKASFRVESSRIGQFTDYDRLIMSVETDHSILPDEAVALAARILQDQFQQFINFDETDEPHqtKDVLPYDSNLLRKVDELELSVRSYNCLKNDNITYIGDLVQKTESDMLRTPNFGRKSLNEINELLASMNLHLGMKIANWPPESIES-
30 UniRef50_UPI0001C30ED1 DNA-directed RNA polymerase... 299 1e-79 1 42.8% 5:317 1:333 ----MLDFQVP-RITTETVEENRGSFTIEPLDRGFGYTFGNSLRRVLLSSLAGAAVTSVRIEGVAHEFSTIPGVKEDVTDIVLNLKGIVCRMHSdtEIEAPLVVTGPGDITAKDIDLPSGVEILNPDAHIATLEKK-TKLEVYLTIGRGRGYRPAEENK---SPDQPIGVIPIDSIFSPVRRVAYAVEQARVGQKTDYDKLTLDIETDGSIDPHAALREAAEILISQLAIFTDADRVIehGAGPGGRPANAMDDILIEELELGVRSYNCLKRAGIQTVGDLISKTENELNAIPNFGKKSIDEVIETLEGRGLHLRQD------------
31 UniRef50_C6HWA6 DNA-directed RNA polymerase... 299 1e-79 1 43.4% 1:320 1:320 MEVLVSS-QMPKGLAVSHSSARSSRVVVEPFERGFGITVGNALRRVLLSSIPGVAITAIRAKNVFHEFSNIPGVVEDVTDIILNLKSLRMKPLLQGEHWLHLKVKGPRIVKASDIDTVGAVEMMDPDHVIATL-DEGGHLDMDLKTEFGRGYVPAD---HSRSTETEVGIIPIDAIFTPINKVNYFVESTRVGRITDYDRLIFEIETDGSITPGEALSEAAKILRTHLDLfhLANDSSPLSLESNSSKEETIMDKSVNELELSVRAANCLKSSDIKKIGELVIRTEDELLQTKNFGKKSLDEIKEALENIGLSLGMDLSK---------
32 UniRef50_C6C1B1 DNA-directed RNA polymerase... 298 2e-79 1 43.4% 5:322 15:331 ----WAELVKPEqvRDPKSNELYGKFICEPLERGFGTTIGNSLRRVLLSSMQGAAAVAVKIEGVQHEFTTIEGVMEDVTEIVLNIKQIRFAMTTDEPQFLTLRVNKQGVVTAADIQENQNVKVLNPEQIIATL-SEKMDMEMTFEIRMGKGYVPADMHEGLVNE---IGHIILDSSFSPIRKVAYSVEQARVGQMTNYDKLIIEVFTDGSVTPEDAIAYSAKILKDQLSVFINFDesEQEESKESDLDLNPNLFKSIDELELSVRATNCLKAANIRIVGELVQRTEQTMLKTKNFGRKSLDEIRRVLDSMELKFGMVLEDFD-------
33 UniRef50_C7MLS1 DNA-directed RNA polymerase... 297 4e-79 1 41.7% 5:316 1:316 ----MTEFMRPT-ITTEEVSDTVARFVVDPLERGYGYTLGNTMRRVLLNSLDGAAATAIQIDGVQHEFATAEGVIEDITDIVLNVKGLVFSVFAEdeATAHVSAEGPCTVTGADLQVPTEFTLVNPDHVIATVADGGQ-LDMTIRIGVGRGYVVAERNKRNED---PIGIIHVDSLFSPVRRCALSVTDTRVGQSTDYDKLILEVETDGSLTPTDAVCQAANIVTQYMGAFLSLNESEEEefAPEGEETNAELDKQIEDLDLSVRSYNCLKRAGIHSVRQLVEYSENDLLNIRNFGAKSIEEVKDKLISMGLNLKQ-------------
34 UniRef50_Q3B6D6 DNA-directed RNA polymerase... 293 7e-78 1 37.8% 7:321 4:324 ------QMQMPAKIEVDehTDQYGRFIAQPLERGYGVTLGNMMRRVLLASLPGTAITGIKVDGVFHEFSSIEGVREDVPEIVLNLKKVRFKSTCKRSCKTTLSIVGPKDFTAGDIVaeGEFEVLNKDLYIATV-NEGSTLNIDVYIGRGRGYTPAEESRP---DSMPIGYIAIDAIYTPIRNVKFAVENTRVGQRTDYEKMVLDVETDGSITPDDSISLAGRIINEHVTFFANftEEEYKQQDDEFETMRRLLNTKIEDLDLSVRSHNCLRLAEIDTIGDLVSRKEDELLNYKNFGKKSLTELKEQLEKFELKFGMDITRY--------
35 UniRef50_B5YG22 DNA-directed RNA polymerase... 291 2e-77 1 41.7% 3:328 2:338 --NLYKEFQMPKKVEfeSLTDTYGKLVIEPLERGYGITLGNSLRRVLLSSLDGVAVYAIRINDALHEFSSIKGVKEDILDIILNVKKLRFKYydSDKKIATIKIKGPADVTAESIQTDGTYEVLNKSQYICSL-DQDAQMEMVLYIRKGRGYVPSE---AIKDDELPVDAITVDAIFSPVKKVNFRVEKTRVGELTDYDRLILEIWTDGSITPERAISDASSILIKHFEYLIFFKevPNPEEDLNFDLLNENILKPIEDLELSVRAYNCLKSAGINTIAELVQRTEGELMKTKNFGRRSLEEIKEVLTNMGLKLGMRINPELLEKFKE-
36 UniRef50_A5CCI9 DNA-directed RNA polymerase... 290 6e-77 1 42.1% 1:328 5:333 LAKNWSSLIKPTKVQYedNNPNIKTMVVEPLERGLGLTLGNSLRRVLLSSLRGAAITSIKIPGVEHELSPVSGVKEDLTDIILNIRDVIVKMDSVQKCNLRLEVTGPAVVTAGMITVTddVTILNPQHVICNL-SKGFNLEMDLICEQGKGYVPTSCLHNSDS---PIGAIHLDALFNPVRRVSYKVENSMVGQMTNYDKLIITVETNGVVNPDAALGLAARILLDQLQVfnFQEVEEEKPEKLELQTINPVLLKKVYELELSVRSQNCLKNENIVYVGDLVARTETQMLKTANFGRKSLNELKKVLANFNLEFGMKDIGWPPDNLES-
37 UniRef50_C0Q9U7 DNA-directed RNA polymerase... 288 3e-76 1 42.3% 5:328 11:335 ----WREIIMPEKVAVT-TTSTYGKFVCEPLEKGYGITIGNSLRRIILSSLYGAAIVSVKFSEALHEYSVVSDVREDVSEIIMNLKEVKLKLDDPGDKILTINVKGEKFVTAADIIsdGRVEILNPEQHIATV-SKGGELMMTMLVKTGKGYALA---ASNKDPEAPVGTIPIDSVFSPIKRVKYVVGASRIGQKTDYDKLTMEIWTDGSVTPEDSVAYAAKILKEQMNPFINFDEDIEPELVEKEhnFNENLYRSVDELELSVRSSNCLKNAQILKIYQLVQKTDNEMLKTKNFGRKSLNEIKEVLTSMDLSLGMDLEGFEPPEEDQ-
38 UniRef50_C7N7V0 DNA-directed RNA polymerase... 286 9e-76 1 42.0% 5:316 1:316 ----MAEFMRPT-VTTEEVSDTDARFVVEPLERGFGYTLGNCMRRVLLSSLDGARATAIQIEGVQHEFTTAEGVIEDVTDIVLNVKGLVFAALTEdeATATISVEGPCTVTGADIQVPTEFTLINPEHVIATVAD-GGTLNMSIRIGVGRGYVSAERNK---RTEDPIGIIPVDSLFSPVRRCTLAVNDTRVGQRTDFDQLLLEVETDGSIAPNEAVCRAANIINQYMGAFLTLADITDEDEGDIpqESNAELDKQIEDLDLSVRSYNCLKRAGIHSVRQLVEFSENDLLNIRNFGAKSIEEVKDKLISMDLNLKQ-------------
39 UniRef50_C7REF5 DNA-directed RNA polymerase... 285 1e-75 1 38.5% 4:317 1:318 ---MIEKLDTNIQILDIDEEENYGKFALYPLERGYGTTIGNSMRRVLLSSLPGSSVSKILIEGVLHEFSTIDGVVEDVPEIVLNIKGLDVTKHVDEDVTLFLDIEGPKIVTAKDIKADSSVDIANPDHYIATV-NEKSRLFIAMDVTDGKGYRVSDDNK---KESDPIGAIAIDSSFTPVEKVNFTVENTRVGESTDYDKLVMEVWTNGTITPQEALAEGSSILIENFSFFNELPNQQFPpeVEEEDSLSEDLAMTIEELDLSLRSFNCLKRAGFDRVGDIIKVSESELKTIKNFGKKSLTEVIEKLDELGLSLKDE------------
40 UniRef50_A6GZ73 DNA-directed RNA polymerase... 285 1e-75 1 36.3% 4:325 2:329 ---ALFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSALEGYAITSIRIEGVDHEFSTIPGVVEDVTEIILSLKQVRFkiEDIDNESVTIAISGKNQITAGDfkYISGFQVLNPELVICNLDSK-VNFNMEMTIEKGRGYVPAEENK---KQNAAIGTIFTDSIFTPVKNVKYAIENFRVEQKTDYEKLVFEIKTDGSINPKDALTEAAKVLIHHFMLFSDEriAQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFGKKSLTELDELVAIKNLTFGMDLAKYKLDK----
41 UniRef50_C7HSB2 DNA-directed RNA polymerase... 285 1e-75 1 36.6% 4:317 1:317 ---MIEKLDTKIEILDIDEETNYGKFVLYPLERGYGTTIGNSMRRMLLSSLPGSSVSKILIDGVLHEFSTIPGVVEDVPELILNIKGIDIKKHTKEDITLFLDIEGPKIVTAKDIKTDAQIDVANPDHYLATVNDKG-RLFIALDVTDGKGYRVAEQNK---KDTDPIGAIAIDSSFTPVKSVNFTVENTRVGESTDYDKLILEVWTDGTITPQEALSEGASILMEDIRFFKDLPGQQFPpeEIEEDNNQMELSKTIEELDLSLRSFNCLKRAGYNTVGEIIEKSESELKDIKNFGKKSLEEVIDKIHSLGLSLREE------------
42 UniRef50_C1A4J0 DNA-directed RNA polymerase... 285 2e-75 1 41.8% 5:320 6:328 ----LSGLVRPQLVekREDSPNLAEFRLQPLERGFGHTLGNAMRRLLLSSLRGSAVWAFRIDGVVHEHQTIGGVVEDVHQIIGNLKTLTLALPDeeQTVLRISKSGPGTVTAADIIATGGVRIIDPSHHIFTITGER-DFNIELYVNKGRGYIESDQHPADK--NLSVDVVRIDAIYSPVRRVNFTVAETRVGQRTDYDRLTLTVETNGTMSPEEAVSYAAALAQTHFQYFVGFGSSASAQPGTAGdrLAELFRTPIDDLELSVRSVNSLKNSNIRSLGDLVRQTEAQILQVKNFGKKSLQEIAALLEKEGLNFGMRYEE---------
43 UniRef50_C1DX45 DNA-directed RNA polymerase... 283 5e-75 1 40.2% 4:314 3:318 ---SLLDFVMPSKIYWDekTENFGKLYVEPLERGYGITLGNALRRVLLSSLPSGAITAVKIVGVPHEFTTVKGVIEDVSEIILNLKQIRLKIDEneRDFAILEVEGPGKVFAKDIKAPPGIEIVNPDEYICTL-SENVKLQMEFRIERGRGYKTVEEL----EDINEIGWILIDTSFSPIKRCTFFVEPVRVGDKTDYDRLILEIETDGTITPDEALEKSANILIEHFTLLQKPTVRKAqpKTEELKIEEDKLSLAIDELEISSRAINTLRKLGINTIGDLVKLSEDDLKEAKSIGRKSLKEIKDALADMGLEL---------------
44 UniRef50_Q9KWU8 DNA-directed RNA polymerase... 281 2e-74 1 40.4% 4:315 1:313 ---MLESKLKAPVFTATTQGDHYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLDPksTTLILRAEGPKEVRAGDFTPSADVEIMNPDLHIATL-EEGGKLYMEVRVDRGVGYVPAERHGIKDR----INAIPVDAIFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHLNYFANPEASLLPTPeeKRESAEEDLDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLRNIPGIGERSLEEIRQALAKKGFTLK--------------
45 UniRef50_B0SA20 DNA-directed RNA polymerase... 280 3e-74 1 37.0% 2:317 4:323 -KNLLKGFKRPKKIEfdVNTPNYGKFVAEPFERGIGTTIGNSLRRTLMSSIEGAAISAIRIEGVSHEFSYIEGVAEDVTRIILNLKQVRIKYEPEdsKVIHLELKGAGYFRAADLAVDSSIEIMNPDLHIATL-NEDANLIMDLEIQRGRGYVPAED---KKKDIEVLGTIPIDSIFSPIQKVLFEVSETRVAQRSDYEKLTMEVWTDGSVSPEDAVAQAAKILKDHLTVFINFEEEIEEEEEELDEADEKllSKHVEELELSVRSTNVLRSLEIDFIGELVKRSEDEMTKSKHFSEQSLLELKAKLSSMGLSFGMR------------
46 UniRef50_Q11QD8 DNA-directed RNA polymerase... 280 4e-74 1 35.6% 4:326 2:329 ---SILSFQMPEKVVMEKADDFHGLFEFKPLEKGYGVTIGNALRRILLSSLEGYAITGIKVPGVLHEFSTIPGVREDVTEIILNLKQVRfkISDVNENKIVVSIKKQASFKAGDikFTSAYQILNPELLICNVDS-NSNFDIELTLEKGRGYLPAEENKPAE---QIFGYIPIDAIFTPIKNVKYSVENTRVEQRTDYEKLILEILTDGSIHPEDALKGAANILIKHFMLFSDQTMTFEAVKAEEEehMRKLLKTSLADLDLSVRAYNCLKAADIKTLGELATLDISDMMKFRNFGKKSLNELEQLIIDKNLSFGMDTAKYKLDED---
47 UniRef50_D2ISB5 RNA polymerase alpha subuni... 278 2e-73 1 33.3% 9:314 6:305 --------IKYIESETYTNTSYYGRFTFQPLKLGQGLTIGNALRRVLLSDLEGIAITSARVSGSVHEFSEIPGTREDVLEILLNLKKIVLKGSSKDAGIARLKVQGPCIVTASDFELPSFVKAVDPSQYIATICDSNV-LEIEVSISAGRGYKLVNRQSLDS----GKDSLELDAVFMPVNKVNYTIEEINTDFPIAEEKLTLEIWTNGSLTPEESLMQAATVLTDILAPIQRIH--LTDEEDFPADKEPEVKNLPIEDLKLSVRAYNCLKQINIDYTEDLLTRSQEELLEIKNFGKKCCEEVTQALKNigLTL---------------
48 UniRef50_B2KEJ3 DNA-directed RNA polymerase... 278 2e-73 1 39.2% 4:317 2:328 ---AFNQLVLPTKIQLDEKtpFYGRIIAEPYESGYGHTVGNSLRRILLSGLDGSAVTAVRVRGAVHEYSTIPNVKEDVINILLNLKKLRVKLEGKNREYVYLTASKPGKVTAKDIAEVSGVEIINKDLEIANL-EQGGKLELEIEISQGKGYVPAED---LSKIQRPAGFIPVDAIFSPILKVHYDVEPARVGQKTDYDRLVIQITTDGTLEPAKALHKAAVLLSQSLHIFTIEGEEVNAAAPETEpkVEELLNQSVEFIELSSRSINCLKSEGVNTVKDLVSKTEDDLKMIKNFGTRSLDEVKERLAEMNLSLGMK------------
49 UniRef50_Q85FU3 DNA-directed RNA polymerase... 277 4e-73 1 31.3% 1:310 3:306 MSQFPIEfiECAASTINHARDIYAKFILQPLSYTQALTMGNSLRRVLLSELESISITAVRIAGASHELATLKGVREDVLQIMLNLKQIVWRGQLKkpTITRLKVQGPAIVTAAAFQSesSANIIDTCQYIATIDTQDI-LEMECQLEQSSGYRLAKPSE-------MIDWLPIDGVFMPVKRVNFWVDKALVDKVLVDKALHLEIWTNGSISPQEALHQAARILTHWFNPLQTLEWKTSHTKNE--QTMAQLSNMLIEELDLSVRAYNCLKRAQIHSVADLMQYTQEELLALKNFGQKSVEEVNKALEQK-------------------
50 UniRef50_C2KYM7 DNA-directed RNA polymerase... 276 1e-72 1 39.0% 5:319 1:312 ----MENIMKPveVKEFVEEQGYARFVCDSLAKGEATVLGNSLRRILLSSMPGSAVSEVKLDSVYHEFSSIPGVKEDVSEIIMNLKNLALRysGEEPVMAYVDYMGEGVVKASDIKVSSEVEIMNPDLVLAHLSGKDAKIYMEMKVSKGKGYDGANTRDHS---DLAIGVIAVDAIYSPVKKVNVFVEE-----QGNTERLILDVTTDRTMMPEEAVSLAARILQTHLQLFMHMDTSAKEQGAAVANQerDELNKSIDELELSVRSYNCLKRAGINTVEDLCAKTMDDLMKVRNMGRKSLDEILNKLESMGLFLSSKAD----------
51 UniRef50_O46914 DNA-directed RNA polymerase... 275 1e-72 1 32.0% 5:320 1:309 ----MTQfiECLDSKVYNARDHWSRFVIDPLKPGQGTTLGNALRRTLLSELEGLAITAVRIAGVSHEFSTINGIREDVLEILLNLKEIVFSGQLQESTIGRLTVQGPAIVTARSFELPPEIKLIDPEQYIATICGNN-TLEMEFKIEVGSGYKIVEKDNSTEHFE----FLQVDSVFMPVKKVNFRIEETRGENNILNEQLILDIWTNGSISAKEAISNAADNLINLFSPLKTIDGES--ETDYETNETSHINQILIEELQLSVRAYNCLKraHIHSVADLLDYSQEDLIEIKNFGQKSAEEVIDALQK---RLGINLPK---------
52 UniRef50_Q0ID28 DNA-directed RNA polymerase... 274 4e-72 1 33.8% 12:313 9:304 -----------IEHQITDDRSQTGVFLIGPLERGQATTLGNSLRRMLMGNLAGTAVTAVRIAGVNHEYATIPGVREDVLDILLNCKQLTVTSRTDELEIGRLIVSGPAVVKAKDLQFSSQVQVVDGERPIATV-SEGHSLELEVHVERGVGYRPVDRH---NEDTSAIDLLQIDAVFMPVHRVNFTTDETAveGGSARERLRMEVVTDGSMTPDDAIAQAANQLIELFQPLATVTMVEEPGIEPEPSAEAQI---PLEELNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALERIGIS----------------
53 UniRef50_Q3ZZP6 DNA-directed RNA polymerase... 273 6e-72 1 35.8% 5:325 1:318 ----MSDLAIPT-ISCTESDGKYGRFVVEPLEKGFGTTMGNSLRRILLSYLDGVAITRVRIDGIQHEFCALPKAKEDTLDFLLNLKNIRVESLSGLEGILYLRASGSKVVTAADIEPSNDFEVVNPELYLLTLDSDDAVLNVELEVELGRGY-----RPPESAENTPIGTIPVDAIFTPIRKVNFTTEPMHVGRETSLERLVLEVWTDGTVEPATAVSRSADILVKQFASLVSHSKVVAEIEASeyTIPEEKYNMPIEQLDLSVRAVNCLRHAGITTVGEVINRGTKELLTLRNFGLKSLTELEDRLKTIGLSLNPEDELFEEAE----
54 UniRef50_C1CXD4 Putative DNA-directed RNA p... 273 6e-72 1 39.0% 20:314 13:331 -------------------DGNYGEFVLEPLTRGYGVTIGNPIRRILMSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVIQLILNLKELVVRFHTSGPKTLTLRAQGEGVVKASAFEVPSDAEIVNPDLTIATLA-EDGKLVMEVRVEEGEGYVPADKHATKDR----INSIPVDAVFSPVRRVAYHVENTRVGQQTDLDRLILRVWTDGSTGPQDALDKSVEILRDELTVFGNVEALpaPVYTPTPVPAHNVYDLplEGLGLTTRVLHSLKEEGIDSVDALCALSDRDLKKVPGIGERSLDEIKQQLAQFGLAL---------------
55 UniRef50_P60315 DNA-directed RNA polymerase... 273 7e-72 1 27.7% 10:323 128:447 ---------KCVETQVEGERLHYGRFAVSPFRSGQANTVGVSMQKALLGEVEGAAVSCATFKNVKSEYAAMKGVEETPMDILVNLKELVIRSDSDEPQKAIISAIGPGPVTAGDIVLPPSLEVTDPTQHIAYLTKE-VSLDIELDVEKGCGYRMGDHTKS------GDGRFYIDSVFMPVRNANYSVHSYESEPDVTQEILFLEIWTNGSITPEEALHEAARCLIDLFLPFLHPkmSQFNSSAEMSAKEVDLRHVYVDQLRIPSKAYNSLKRANINTVSDLLDYTQDDLLSIPNFGRKSVDDILEALQA---QFSIDLPENNP------
56 UniRef50_Q1IX99 DNA-directed RNA polymerase... 273 8e-72 1 40.6% 22:314 15:329 ---------------------DYGEFVLEPLTRGYGVTIGNPIRRILMSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVIRIILNLKELVVKFHAPGPKTLTLRAQGEGVVKASAFEVPSDAEIVNPDLTIATLA-EDGKLVMEVRVEEGEGYVPADKHATKDR----INSIPVDAVFSPVRRVAYHVENTRVGQQTDLDRLILRIWTDGSVGPQEALDRAVEILRDELTVFGnpRQPELSINPQPYPADLDTPRVTLEGLGLTTRVLHSLKEEGIDSVDALCALSDRDLKKVPGIGERSLDEIKQQLAQFGLAL---------------
57 UniRef50_B1GZB0 DNA-directed RNA polymerase... 272 9e-72 1 36.6% 1:322 1:317 MKALDLEKLRKLILDEKTATKFYGHFSAGPFERGYGHTIGNSLRRILLSSLEGAAITSVKIAGAFHEFAVLKGVKEDVAQIVLNLKRIKVKLHSEGPEKLYLKVKKAGTVTAKDIEANASVEIMNPEQEIANIDN-GTTLEMELEASLGKGYVLAEEMKSNG---YSSGTIILDSLFSPIIKVNYEVENTRVEQTLNYDKLIIEIWTDGSVSPKDALMRSAEILRKILVIFTDNA-FKTEEVSADKEEQDGILGKPVSIMDISVKTLKSLKSAGIETVEDLVKIKEEDLLNFNNLSKRSCEEIKNRVKELGLSLGMKIEDGE-------
58 UniRef50_B7CA10 Putative uncharacterized pr... 270 6e-71 1 35.6% 13:318 6:317 ------------KISTIEETTKEGKFLFEPLEYRYGTPLGNALRRVLLSSIPGGAIFSIRIDGVYHEFTGIKGVKEDVASIILNLKQLILDIddNEVYTLRIDQEGPKTVVAGDIECPTGVTVLNKDLPICTL-SEGGSIHMELQARLGRGFVRSDVNKryQNEGQPLGIIYTDSLYSPVKNVSYVANPIKSEDGSMYDSLELEITTDETIKPSEALAVAAKILRDHLSILASVDevKEQEVEVSEEPVVHTTHKMIEDLELSVRSYNCLKRAGIATVDELTQKTEEEMIHVRNLGKKSLQEVKDKIKELGLSFRQNN-----------
59 UniRef50_Q4G347 DNA-directed RNA polymerase... 266 6e-70 1 34.8% 11:315 6:309 ----------CLESAQKAATENVAKFCIEPLSKGQGITIGNALRRTLLSNIPGTAIVGTRISGVDHEFSVIPGVKEDALEILLNLKQLVFKGNLNEPIITRLNIQGPCIVTAGDIDIPTDLELIDPQQYIATITDFSH-LEMEFILEQGESYVLSEKTASNN----PRGFLAVDAVFTPIKKVNFFVETSSSKERLEKERLIIEIETNGSILPLEALNLAAERLSSLFKLVNSAdeFPTEVENIVQVSQTDVTGVLIEELELSVRAYNCLKRAQIHTLGELLKYSKENLLEFKNFGQKSANEVCENLHefNLTLN--------------
60 UniRef50_A8SNA8 Putative uncharacterized pr... 266 6e-70 1 36.2% 6:314 3:309 -----EDLNTNIEVLDIDLEKNYGKFAIMPLDRGYGTTLGNSMRRVLLGSLPGSAIATVKIDGVGHEFTTIKGSIADVPEILINIKGIALKKFNDEPVILELNVKGPKVVTAGDISENQNVEIANKDHYITTLNEEG-EIRMDLLVLNGKGYRVSDLNK----EYCDINSIAVDSSFSPVKKVNFIVGNTRVGQSIDFDKLEIEVWTNGTITPQEALSTGAGIFIDYLSLFRSLPDINLDNSSIKDGKILdvLSKSVEELDLSLRSFNCLKRANLDTVKDIISQDIEQLKKIKNFGKKSVEEVVDKIHELGLKF---------------
61 UniRef50_Q2NIY1 DNA-directed RNA polymerase... 266 1e-69 1 33.7% 1:329 1:326 MKNL--KFIKPFFVEEIDENPISGKFTIKPLERGYGITVGNALRRVLLSSLPGAAIVNVKIQGVEQEFTTIPGVYEDVMTIILNLKKIVfdESDDFEEKLELIAKGPQRLTAASFELPAGVKIINPDHYITTLSD-DVCFHMTVTIKKGIGYVGAKENKVHIENQ--VGVIAIDSLFTPVVNVSYQVEK----KLGNKDELTIEITTNGALLAKEALATAASILVDHFNVLVELSQKPAHVeeSKKEAHNYVLDLEIEQLDLSVRLFNSLKRAGIDTVASLVKLSEKEVVKLKSLGRKSFQELKDKFLEYGLEFNDYLKEALHHSVEED
62 UniRef50_Q2GEB6 DNA-directed RNA polymerase... 265 2e-69 1 35.9% 2:321 7:332 -KGSLVDVFSSPSVVFNQIREGyaEFIVEPLRVGFGLTIGNAMRRVLLSSLSGFAISAVGIKGLTHEFSCIPGVREDFADLALNLKKVVLKssGATCGNLHLSVTDGGAVFSNMISPSHDFEVVNGDLLICNVA-EGVSLEMEMKVSSGFGYVSS--VSVRKDEYDLEGAVPIDAIYNPVRAVNFTVKPTSAGSFAGHDKLILYVETNGAMDPKTAVLEASKILSTQARCFLNIADPEHRVhtSDRNDASDLLSARIDRLYLSARARKCLNGENIVYIRDLVSRTEADLLKAPNFGRRSLEEVKKELFSKGLSLGMNLDSH--------
63 UniRef50_A5IMB1 DNA-directed RNA polymerase... 263 6e-69 1 40.0% 5:314 1:332 ----MIEFVIPKKLKVEEEReyYARFSLSPLERGYAITIGNALRRVLLSSIPSLAIVGVRfpEKYHEYDYIEGVKEDILDIILNLKKVQFRVnvKGTIKMEVEKKGPGELVAGDIKTPAGIEVANPDLHIATLNSK-ADLFFEVYAEVGKGFVPVSER----EERPDVGWIPIDGVFSPVIKVNFLTENVRVGKRTDYDKLILEIWTKKSIRPEEALRKAADILINHFKIveEEAEIPAVDHEEENRENLDVYNRKIDELELSVRSLNCLKRAKIETIGDLLSKTEEELLKIKNFGQKSLDEVKEKLKefGLEL---------------
64 UniRef50_B0VI04 DNA-directed RNA polymerase... 261 2e-68 1 37.0% 5:320 4:321 ----LEPLQMPNEVDYdsYSRTYGKFEIGPLEPGYGTTIGNTLRRILLSSIQGAAVRFVRIEGLHHEFCPIPGTNSDYIDLILRLKQLVISSSSVEEVPLVLEHKGKGVITASMIQETAYVKIINKDLYLLEVVD-DIDFRLEMIVGIGRGYVSADRQ---NPEGKAVGFIPVDSIYSPVLKVNFSVSHQRVKERMNFDRLIMEIYTNGAVEPSIALFLAAKILKDMAAKISLFEIEPQyeLDPELEEKERILKTSVKEIELSVRAANCLAQAKIETIGDLVSKTEAEMLKFRNFGKKSLEEIVQKLKKYDLHLGMDVEG---------
65 UniRef50_Q2SRH9 DNA-directed RNA polymerase... 261 2e-68 1 34.2% 5:317 1:317 ----MKQFVRPEFILLKeqDKNYGKFSVSPLERGFGITLGNAIRRTLLAATPGASVYAIKIAGATHEFTSIPGIIENVTKIILNIKQLVLrySDDEVVQLKIRSDIQGPVYAGDLELPAGVEVLNQDLLIATI-SEGGILDLVLYAKNSRGYKTFKDNK--NEKNIEPGMITIDSNYSPIIKVAYSVDSAKIGRAIDLEKLELEVTTDGSITAIDAISIASKILVAHLEFFIdnREISVLEVIGVNQTDDKELDRTVEELDFTQRSLNCLKRAGINTLRELVTKNEDEIGSIRNLGRKSLKEIKDKVASLGLAFRQS------------
66 UniRef50_Q85FJ1 DNA-directed RNA polymerase... 261 3e-68 1 29.0% 1:307 6:326 MSTSKQAIqkCLESKIESKRLHYGRFLVSPFKRGQASTVGIAMRRALLQEIEGTSITCARFCGVVHEYSTITGLQETIHDVLVNLKEIVLRGDSKEdqEAFLSVTGPKEVTAGDLSLPPGVEAIDNSQYIATITQP-ISLTIELEIEKDCGYRIENLAKSGK------GQFPIDAVFMPVRNVNYSIHLFGSGRAT-QEILFIEIWTNGSLTPHEALRKASEKLMDLLTTFLysPSLQPQFGDTNNLEERVLENRFIDQLELPARAFNCLKRAEIYTIADLLNYSREDLSKLKNFGRKSVDQVSEAL----------------------
67 UniRef50_B7C9S8 Putative uncharacterized pr... 261 3e-68 1 34.1% 4:317 5:320 ---TMQEFErsLHKDFVNEENNTGSYIFEPLERGFGITIGNTICRTLLTSVPGTRIVGFKVSGFDGKATMVDGILEDIYRISLNLKAVQLYNDGEGFQTLHISKKGPATIQAADIICPEAVEVVDPEQVICTL-EKGASLEMEIYAVTGTGYKSSIENKVS--YDFGEDVVVLDATFTPIRKADYLSEPARVGLDKKYDKVHINVETDGTITPLQAITMAAKVCMENLDEVLTVSDLELEeqKPQVEDVKKVNTMMIEDLDLSVRSYNCLKRAGIQTVDELTQKTEDEMMHVKNLGKKSLKEVKDKMYQLGLFFKSY------------
68 UniRef50_A0T0Z4 DNA-directed RNA polymerase... 260 4e-68 1 29.7% 3:315 2:313 --NSSNLLMECIKSEKIESGPMYGQFLIDSLSSGQGITIGNLLRRVLLGDLQGTAITGVRIAGVKDEFSLIPGVREDILEILLNLKGIVLKSKTPNRQFGRLRLQGPAVITASSIQLPPEIEIINPNHYIATISSSHI-LEIEFKIESGSKYRLANELFSDKFE----DFIETDAIFMPVQKVDFKVENVYDNSNNIKERLLIDIWTNGSISPEQAIFSGSNLIINLFKSIGEQKINKEKENIKEKNHIKPIdhIAIEELQLSVRPYNCLKRAQINTIGDLLDYSPEKLLELKNFGRKSADEVFATLkkLGIVLK--------------
69 UniRef50_UPI00016B2694 DNA-directed RNA polymerase... 259 1e-67 1 39.0% 5:299 1:294 ----MTKVIhpALSNIEDYSSTSAAFTVEPLRGGYGNTLGNSLRRVLMSSIHGAAVISFKIEGATHEFTTVPGIKEDVVDISLNLKSVKIKMHTDDPIELRLEKHGAGQVTAGDIQSHADVEIINPEQVICTVDDPSAKAVIDLVIDSGRGYLSIED---SSETRLHSDHIALDAVFSPVIRVRYKVESTRVGQETNLEKLIVVIDTDGSITPRDAFEEAAAILVNQYTALAGSTVVEspALGQEREEESNELNTSIEDLDLTARTANALINNDIRTVQDLVTLTEQDLRELKGFGSKA------------------------------
70 UniRef50_Q5SD25 DNA-directed RNA polymerase... 258 2e-67 1 26.9% 10:318 19:335 ---------RCVESKVESERLFYSRFILSPLKVGQANTIGLVMRRALLGEIKGTCITCAKFENITHEYSTMDGIQESVHDILINSKEIVLKSKSSEAQKAFISIVGPRRVTAQDIELPTSVEVIDPMQHIATITKK-VKLNIELKIEKDSGYRRQN------IVEYKDGNFTVDAVFTPIRSVNYSIHCFESHDKSikEMLLYEIWSNGSITPEEAIYEASRSSINLFLPFLQAEKEKEDFKGEDIHESNAlqHIFIEQLELSPKAYNFLKKINVHTISDLLDYSQDDLMKMKNFGKKSVEQILEALQK---RFGMRL-----------
71 UniRef50_Q73PK8 DNA-directed RNA polymerase... 257 5e-67 1 33.3% 2:316 4:329 -KNLLKGFKKplEFAQQESTESYGKFTASPFETGFGTTIGNCLRRILLSSIQGYAISAVLidGVPheFENIPNVSEDTLEILNKLKQIRLRLSDESEqdFHFEFKGPASITSKDFAVEGQLEILGEPFYVMELM-KGANVSFDVQVDFGRGYVPAE---VNEKYIEIVGTIPMDAIYGPVLKVSYAIEPCRVGQRNDYDKLILEIWTDSTVRPEDVLGEAAKIAKDHFSIFINFNENDydEDDNEEAVIKQLLATSINTLDFSVRAKNCLDSAGIKTLGELAQKSEDEIESMRNVGRMTLNEIHAKLAEYNLRLGM-------------
72 UniRef50_Q0SN05 DNA-directed RNA polymerase... 256 7e-67 1 34.1% 1:320 3:331 MERFLKDFTIPEKIEFLKSQDdyGKFTIYPFERGFGVTIGNTLRRVLLSSIEGYAITAMRVQSNNkeFDLIPGVSEDTLEVIANIKNIHLKleGEQRKTISFSVSGknVLKASHFERD-GVEVFNKDLVIATL-SHDVNLDFEFQINYGRGYVSSEQN---SKYLEEVNVIALDSIFSPIEKVSYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLFPLVDFEDSVSVSFDKSKSESSNLLDMSIEKLDLSVRSLNCLAKENVRTLGELISKNAEELSKARNFGKKSLEEIIEKLGSYQLFLGMSKED---------
73 UniRef50_Q8M9V7 DNA-directed RNA polymerase... 256 7e-67 1 29.6% 10:310 16:329 ---------RCLESKIEKSTLHYGRFIISPLWKGQANTIGLALRRTLLSEVEGTCITSVKIKNAIHEYSSLSGVQESVHDILINLKKIILSSSFSGIFEGFLSVVGPKTVLASDLNLPSFIKIVNPDQYIATV-NKPINFNLQIYIQKGKGYSLKNPISI------KQGFFLVDPVFIPIRSVNYSIHSFEDEKAT-KEFLIVEVWTNGSIEPKEAIKEASYNLVNLFTPLVSQEYQQLKNQLFKEDEKNKElqIFLDQLELSSRAYNSLKKNNINTISDLLKYSYEDLLKIKNFGKKSADQVIEQLKKR-------------------
74 UniRef50_Q8RE44 DNA-directed RNA polymerase... 254 2e-66 1 34.8% 5:314 4:319 ----IEKQAKAIKITEVKESNYKGQFIVEPLYRGYGNTLGNALRRVLLSSIPGAAIKGMRIEGVLSEFTVMDGVKEAVTEIILNVKEIVVKAESSGERRMSLSIKGPKVVKAADIVADIGLEIVNPEQVICTVTT-DRTLDIEFIVDTGEGFVVSEEID---KKDWPVDYIAVDAIYTPIRKVSYEIQDTMFGRMTDFDKLTLNVETDGSIEIRDALSYAVELLKLHLDPfrDDIEEMIEEPMDIQVIDDKSHDMKIEELDLTVRSFNCLKKAGIEEVSQLASLSLNELLKIKNLGKKSLDEILEKMKDLGYDL---------------
75 UniRef50_B2S0K5 DNA-directed RNA polymerase... 254 2e-66 1 33.3% 3:320 6:331 --KLLKDFTIPDRIEFleDDGSYGKFIIYPFEKGFGVTIGNTLRRVLLSSIEGYAISAMRIQSnsSEFDLIPGVVEDTLEVIANIKNIHLKLDEgkSATISVSVNGknVLKAVHLERE-GVEVCNKDLVIATLSSE-ANLDFEFQVDYGRGYVSSEHNAKYLEE---VNTIALDSIFSPIEKVTYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLLPLVNFEDKVVHSVDDSEFRDSDILNMNIEKLNLSVRSLNCLTKENVKTLGELISKSAEELSKARNFGKKSLEEIVEKLSVYGLFLGMSKTE---------
76 UniRef50_D0JAU5 DNA-directed RNA polymerase... 253 5e-66 1 34.0% 4:329 2:335 ---AILDFVKPDRIAMSEFSDNKGIFHLKPLEPGYGITLGNALRRVLLGSLKGFAVTSIRIKGVKYEFSTIEGVVEDVTEIVLNFKKIRLKQKISGIHKETVNASigKQVTGGYlkFISGFHILNENLVICN-KDESIPLEISFTIEEGRGYVPAEENK--KNNDHLIGTIPIDSIYTPIRNVKYTIENCRVGQKTDFENLSLEIQTDGSICPKSALMEASKILIQYFSIFSHEKIGKKKqyDEEFLRMRTLLKSKLSDMDLSVRTKNCLKSASIESIADLVSCNRNNMLKMRNFGKKSLDELESKMKEKGLCFGMEISEYRLNNKENN
77 UniRef50_C7BED9 Alpha subunit of RNA polyme... 252 1e-65 1 30.9% 11:314 14:348 ----------CIESRIEENKNFYGRFILGPFEVGQGLTLANSLRRTLLSEISGLAIVAMEIEGALHEYSNLPGVQESILDILLNLKQIVlrFEMDQPVFGFLKVQGPGIVTASDLKLPSSIQCVDPHQYIATLSYNG-FLSIKFFVCQKKNYIFLKnkKSNFLINKTSNVVSIDPNFFSVNKVNYLIETCSLffEKPKEQIFLEIWTNGSLHPRQAINEAAKRIVNIFSPFQETRFYKPGRLKskRENFKKFTSLDIANLDLSLRSYTCLKRANIHTIDNLLQYSSEELLLLKNFGTRSLEEVLNILQQIGLNL---------------
78 UniRef50_Q1ACG7 DNA-directed RNA polymerase... 250 6e-65 1 27.5% 10:322 13:338 ---------KCLESKIESQRIHYGRFAIAPLKKGQANTLGITLRRTLLSDLDGICITSVKIDNIKHEYCTLTGVRESIQDILLNLKEIVFKGVCDKTQKGFIFVKGPKKITASDIQIEPCIEILDSNQIIAHLTEP-IDFKVELTIEKSMGFRLQNATQISK------DSFSIDAIFMPIRNVNYSIHPVEKAGDWKSELLILEIWTNGSITPKEAFHQASEKIMNIFLSLSNSSDNQIQEKSTKNFEEKewKKISINQLELSARAYNCLKNEKISTLFDLLNYSQEDLLKIKNFGKRSFEQVVNALEK---HFDMKLSKDS-------
79 UniRef50_A9CP51 DNA-directed RNA polymerase... 248 2e-64 1 28.2% 10:314 202:520 ---------RCVETFKENDHRHYARFAVSPFRQGQAITVGNALRRALLGEVQGAAITCATFkgIVHEYQAVDGIQETVQDILLNVRDVAIGSNTHEPQKAFISVMGPRQVIAGDILCPPSLVVPDPSQNIA-LVTAAIPFNVEIEVEKDVGYRIVDPGKSTN------GRFYIDSVFMPVVQANYSVHSFEVEDVT-REILFLEIYTNGSISPEEALIEAARSLIDLLLPLLESEVIEVTNTTEKEnkEVTYKHVFIDQLKLPARAYNCLKRANIHTVSDLLDYTQDDLMRIKNFGKKSVEEVLEAlaQFNISL---------------
80 UniRef50_C6KIM3 DNA-directed RNA polymerase... 248 2e-64 1 29.4% 5:310 1:299 ----MQQffEKIESYSNDLGEQSSRFLLKELTQGQGLTIGNTLRRVLLTELEGTAITAVRINGINNEFATIPGVREDVLEILLNLKQIKFTGLVTEPFFTHVSVQGPQLVTAANISLPDGLSLLNSNHYIAAVA-EQTNFEIELKIESGTGYNFTDE----ENRICSGDFLSLDSIFTPVKNVNYQIKDSYKIDEKITEILDLEIITNGSITPNDALNKAALVLQTLFGSLVIDELQTNPVLPEQTETELDIL---IEELQLSVRAYNCLKRVNIKTIADLVQYSVKELKDIKNFGQKSANEVVEKLQDR-------------------
81 UniRef50_Q9ZJT5 DNA-directed RNA polymerase... 244 4e-63 1 28.2% 1:326 1:330 MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLKIEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAkeNQSVVVDYSFKGPMELRARDLNSD-HIEIVNPEMPLATI-NEDAQLNFSLIIYKGMGYVPSE----NTRELMPEGYMPLDGSFTPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIANTesGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMGKKSYDEIAEKLNDLGYPVGTELSPEQRESL---
82 UniRef50_C5F0M8 DNA-directed RNA polymerase... 242 1e-62 1 29.0% 1:324 1:321 MKSIKTSPHIPTKIEVRETGNNKVQITAYPFENGYAITLAHPLRRLLLGSSVGFAPIALRISGVAHEFDSVRGVVEDVSQFIVNLKAIRFRIKdsDNVSVDYKFNGSKVITGADL-SNELVEVVTPDIHLATI-NEDATLAFSIIIYKGIGYVPSEEIRASV----PEGFMPLDAYFTPVTSATYTTENMLLEDDPNYEKIIFDIQTDGQVDPLTAFKNALSVMHKQMSIFNSELNIEMPETteEERPELKVLSQTIDSLNFSARCFNCLDRSGIRYLGELVLLNEDQIKNIKNLGKKSLDEITAKLDELGYPVNREIPEDLLQ-----
83 UniRef50_C2KUE9 DNA-directed RNA polymerase... 241 2e-62 1 32.7% 5:319 1:314 ----MFDFTKpiEILEISEDKRFGRFVCEPLERGYGSTLGNSLRRMMLSSLPGAAISAIKIENLSG--DKVSGIQESFPELLTNLKSIAVILPEeeSLEVSVDLSGKSEILAEDFIGESELKLSNPTEHIATV-EAGAQGSISLFISRGQGY---SGEKAEGRVEAPKEYQDIDALYTPVERVNMSIENTRVGNMTDYDRLTLDVYTNGSMSPEDAISKAAQMLFQHLDLFVALSEEVAATedKPEDEKGKVMEMNIDELELSVRSYNCLKRAGINTVSELTSKTPEDMMKVRNLGRKSLEEVLAKLRDLNLGLSFPEE----------
84 UniRef50_B0B881 DNA-directed RNA polymerase... 238 2e-61 1 36.7% 6:321 11:351 -----NKFELPESVKMSPVedKVARFVADPLEKGMGHTLGSALRRALLIGLEAPAIVSFSMTGVLHEYMAVEGIIEDVTNIVLNLkqDCEGGRCSQKLRATISVdgQKEVTLGDLLQEGTFEAVNPEHVIFTVTRPMQ-LEVMLRVAFGRGYSPSERI---VLEERGMNEIVLDAAFSPVVLVNYFVEDTRVGQDTDFDRLVLQVETDGRVAPKEAVAFATQILSKHFSVFEKmfEEAISVEKENKDDILHKLVLGINEIELSVRSTNCLSNANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLSQF--------
85 UniRef50_A8ETK6 DNA-directed RNA polymerase... 238 2e-61 1 30.5% 1:328 1:321 MKKFAETPFLPTEVEIEAISDNEAKISAYPFEDGFAITLAHPLRRLLLSSSVGCAPIAVKIEGASHEFDSLRGMLEDVAIFVINLKNIKFKIndKEQVVVEYSFNGPRDIKGEDLI-NSEVDVVSKDAHLATINS-DCNLTFSVILQKGIGYMPSE----DIRDIVGADYIPIDAFFTPVKKVVYDIEKMLVEDNPNYEKAVFRVQTNGQISPVTAFKEAVSVMYSQMSVFNKVFDLSEVAVSDSGEEPVEllVIRIDDLNLSARSFNSLDRAGLKYLGELVLMSEVEVKNIKNLGKKSYDEIAEKLE----SLGYPVENTLPENVAS-
86 UniRef50_C1KR47 RNA polymerase alpha chain ... 236 6e-61 1 24.8% 9:314 12:348 --------LECVEFRENNPRDHYARLVLGPLAPGQGVTLGNTFRRLLLNDLPGVAITAAKLNETRTEFMTLPGIRESVVEIFLNLRDIVFFNTFPdqGTITisFHTPRVICAGDMQLPEGITCVDPTQPIATLMNGDTAFNLTFILEqgTGFYPSPQIESVQIEQVKSgfQPIDGNFMPVKNVNFAVH----EVQPHGEYIHFEITTNGSIHPHNAFKHAGAILTEITRATLQDpdEASTPVDTAVAQKAYFENIAIEQLELSLRAYNCLKRAQILTLADLSRESYSSLLALRNFGQKSAEEVAKALETYGIEL---------------
87 UniRef50_Q0P3L0 DNA-directed RNA polymerase... 236 7e-61 1 27.5% 9:317 8:356 --------LKSLQYRQNSLTDCYGRLSFGPVNPGQGLTIGNTLRRILLNDLPGIGVIGAEINGVQSEFSTLPGIRESVIEIFLNLRELIFTPTATCAQKveLKIDnpYVVTAKDLHIP-EYEFVDPNQQIATILSPTanFKLTLLIGQGRGYQSWkeQFDSTQTNSKSVTFPIDAIFMPIRQVNFTVQEHSV----DGEYIYFEVWTNGSINPFDAVKSAAKvmKLMTACLTTLQDQqvQVNYNKMESESNFDQIFIEQLELSLRAYNCLKRANILTLADLSQQSFRDLMKLRNFGQKSADEVRAALSTYGIELKED------------
88 UniRef50_Q8EUD7 DNA-directed RNA polymerase... 236 7e-61 1 33.0% 5:319 1:331 ----MEKFLRyiQikDQNKDADYGVFVFKPLERGFGHTLGNSLRRVLLSNIIGHSLFAIKIPNVSHEFQSIKGVKEDLTQIILNLKRLVVKIDqeKWPTLKIDFSKGGVLKASDIETPVGFEIINKDMYIATIES-GVKFKMELFVKTGRGFTTFSENK---ELINAINVIAVDSNFSPVLKVGYKVSDIKTTKNEINDVLELEVATNGAVSAAEAVAMSAKILLEHYKpfDNYNDLRIINEEATVSSSKSSLAISIDELELSVRSYNCLKRAGIHTITQLTDKTKGEIEKIRNLGKKSFKEIIKKIQDRNLKLKEEQN----------
89 UniRef50_Q7YJU6 DNA-directed RNA polymerase... 236 1e-60 1 25.4% 10:320 16:336 ---------KCVESRTDSNRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGTCITRAKSEKVPHEYSTIVGIEESVHEILMNLKEIVLKSNLYGTRDASICVRGPKYVTAQDIISPPSVEIVDTTQHIASLTEP-INLCIELQIERDRGYRMKAPN------NYQDGSYPIDAVSMPVRNANHSIHSYGSG-NEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIHLNLEDNQNRFTVSpiFIDQSELPTRTYNCLKRSNIHTLLDLLNNSQEDLMRIEHFRIEDIKQILDILQK---HFGIDLPK---------
90 UniRef50_A7H5U5 DNA-directed RNA polymerase... 236 1e-60 1 31.7% 1:315 1:313 MRNITISAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLRRLLYTSTVGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKIKSdnKEIVEFSFKGSKEIYGKDLNND-QVEVVNKDAYLATI-NEDAELEFTLIVEKGIGYIPSEEIKEFLNDPK---FIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALEAMYKQLSVFDKITNVRskNQATSNELENTKLLQNITDLNLSARSYNCLEKAGVVYIGELALMSVSELAGLKNLGKKSLDEIKNIMENIGFPVG--------------
91 UniRef50_C0QW20 DNA-directed RNA polymerase... 235 2e-60 1 32.8% 1:317 3:323 LKEILESIRHPHRVTFEKKdpTYGKFIAQPFERGYAVTVGNALRRVLLSSIPGYAITTIKIDGVSNEFENVPGMKEDTIVMIMHLKNVVVSLPShdTKTIHMKKEGPCVITAGDLVADdeAQVHNPDYYIATIA-EGYTFEMDIQIEGGYSYVPAEMNIELLED---INAIAIDAIYSPIVSVKYNVDPIRVGQRIDYGKLTLEIETKGNIAPDKALSQAAKILRDNLKHFMDPEEANGdeETPKDSVLDSLKGKHIEEVEFSVRTANFLMASDLKTLDKVAVKTDADLLRLIGANEMIIEEIKEKLAEYNAHLGMR------------
92 UniRef50_B3R017 DNA-directed RNA polymerase... 234 2e-60 1 33.6% 17:320 16:319 ----------------LSEDLSFGRFIIQNLEPSYGVTIGNPLRRVLLSSLPGAGIVYVEIKGVDHEFSTIPGVYEDVMSIVLNLKQVVisIDDDFEQEMELFVTGKQKVTASCFEQVEGIKIINPEQEIANLVSENASLKMTVLIKRGIGYVSAEENKIYTK--KKKGLISIDTLYTPVSKVSYDIEK----KLGDKEELAIEITTNKSTTAKDALTTASKILFDHFSFLANLNEKKDqiYKPKKELPNKSLELRIDQLELSVRLFNCLKKSGIEKVSDLVLLKEEEVFKLKSLGRKSFNELKEKFKQHGLEFQNDLEK---------
93 UniRef50_P47423 DNA-directed RNA polymerase... 233 5e-60 1 29.0% 1:314 1:326 MEKFLKYEIKVNNNQPTNTNPNYGIFEVAPLESGFGITIGNAMRRVLLSCIPGASVFAIAISGVKQEFSNVEGVLEDVTEMVLNFKQLVVRISdeRWPVLKVTAEKKGAVYAKDLECPAGFEVINKDLYLFSL-QKDMKLTVSVYVKQGRGFTSFLENRELINS---LGIIATDANFSPVLHCGYEVQEVKTSKQKLTDHLTFKIATNGAIKAVDAFAMAAKILIEHLNPIVSVNESIKniQEKAEERKVKSFAKQIEELDFTVRTFNCLKRSGIHTLQELLSKSLTDIREIRNLGKKSEREIIKKVQELGLKF---------------
94 UniRef50_Q9RDV6 DNA-directed RNA polymerase... 233 8e-60 1 33.8% 5:315 1:323 ----MQQFLRyiNVIKEDNDKNYGKYIVKPLEKGFGITLGNALRRVMLSHLPGSSVFALKIKGISHEFGFIPGVKEDVTQIILNIKNLVVWISdeKWPVMTIRANKAGIIKAGDIECPLGFEVFNKDLEICTL-SEDAEVAIDIYATRGRGFKTAAEN---RSEIGSLSIIPIDSNFNPIIKVGYHVEEETSDVITDK--LIIEVGTNGLIKSGDAIAIASKILSDHLKPLIDINKSLHDIqeKNVEEKNKKLSIPIEQLDLTVRSYNCLKRHGIQTVEELVTRSKSEIENIRNLGKKSVREINKKLSeyDLKLK--------------
95 UniRef50_O98462 DNA-directed RNA polymerase... 231 3e-59 1 29.9% 17:317 25:344 ----------------KEECLDYMLFIASPLLAGQATTLGVAIRRTLLESIQGTAIVAAKIYGAAHEYSTLEGIQESIHDILLNLKQVIIKNKICEFQKCLISIIGPKKVTAADIELSQNITISNPYHHIATITKP-IRFQVELIINKGRGYLIQDGNDVQ------DGYFPVDALFNPVRNVNFSIHNLAEQQ----EALILEIWTNGAITPLDALRQGSENLIHLFLpfELHSIERIEDSHLIKDQFLEYSKTPIELLELSTRPFKCLKNANIYTINDLLKLSQQDLLKISNMGPSSVKQIVEALDkfGINLKLK------------
96 UniRef50_P56762 DNA-directed RNA polymerase... 228 2e-58 1 25.6% 10:310 16:329 ---------KCVESKRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSENIPHDYSNIAGIQESVHEILMNLNEIVLRSNLYGTRNALICVQGPGYITARDIILPPAVEIIDNTQHIATLTEP-IDLCIELKIERNRGYSLK------MSNNFEDRSYPIDAVFMPVENANHSIHSYGNG-NEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLENNqkTKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHVEDVKKILDILEKK-------------------
97 UniRef50_Q9PQN4 DNA-directed RNA polymerase... 227 4e-58 1 36.7% 5:317 1:327 ----MRKFLKYQlpSINSEDKNRTVVKIAPLEIGFGDTLGNALRRICLSSIPGASMFAVKFGGYSHEFQPYEGVKEDITHIILNLKNLAIKIDedKWPKMKINFKGPGVITAKDIVCPVGFEIVNQDLYIAEVTKP-IDVEIEIFAKTGRGRVDFNTNKDFVSTLHII---ATDSNYSPVLHYAYNVEMIKDSKSSMSEILTIDIATNGTISGSEAIAIAAKIMQAHLEpiDKTINEMIIMREREEEEKRQNASISIDDLDLTVRAYNALKQSGINTTAELIELTKSQLEKIKNLGRKSVTEIIQKLTERSLELKKD------------
98 UniRef50_C4XFY9 Putative uncharacterized pr... 226 7e-58 1 27.7% 5:314 6:334 ----MTKLEYQKVTKLNNSTSNVTAFTLQPLERGMGQTLGVALRRILLSNITSLALFAIKIEDVNHEFQVVDGCVEDVATIIMNLRKVKFQYndDEIIKVTLKADQPGEVTSRLLEvnSSIEILNKSLEIAHLSANghKLNIELYLRPGRGFISNEENKKleSKIKNGIFIATDSNFSPIEKVNYTVEELNSSSNKIEERLTFSFQTDGTVDPKSALQQACEILVGHFKLIGNVDEMKVNVFAEESEQTQEtnDVDINSLNLSVRSLNALKRIGKTKISQVAEMSLEELEQVKNLGRKSLDEIQQRLKEYGYEL---------------
99 UniRef50_A0Q4K8 DNA-directed RNA polymerase... 226 8e-58 1 40.1% 2:323 4:318 -NNSKQEFVPNIQLK-EDLGAFSYKVQLSPVEKGMAHILGNSIRRVLLSSLSGASIIKVNIANVLHEYSTLEDVKEDVVEIVSNLKKVAIKLDTadRLDLELSVNKSGVVSAGDFKTTQGVEIINKDQPIATLTNQRA-FSLTATVSVGRNVGILSAIPT---ELERVGDIAVDADFNPIKRVAFEVFD-----NGDSETLEVFVKTNGTIEPLAAVTKALEYFCEQISVFVSLRVPSNGKTGdiDSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYSESQLMKIPNLGKKSLNEIKQILIDNNLSLGVQIDNFRE------
100 UniRef50_A5IYV9 DNA directed RNA polymerase... 224 2e-57 1 26.0% 1:315 1:332 MKRMSKLDYLQVSNSAINNNLNEVTFSLKPLERGFANTVAVALRRVLLSNITSLALFAIKISGVSHEFQTIPGIVEDVTAIIMNLRKVKFKYNPeeIIKATIKAEQPGVVTSKSiiSNPSVEIINKSQEIANI--QKGALVIELFLRPGRGFISNESNKKfeSNIKKGLFIAVDSNFSPVEKCSYTVKELNTSSNKIEEELLFTIKTDGTVDAKSAINQACKILVAHFMTVGDVDAMKIdeEEKINNDEPIENDVDINQLGLSVRSLNALKRIGKTKASEVAAMTWEELEQTKNLGRKSLDEIQECLKLNGFTLN--------------
101 UniRef50_Q32RM8 DNA-directed RNA polymerase... 221 3e-56 1 28.7% 9:315 12:356 --------CKCLNHEIQNARLHYGRFAVYPLFPGQAITIGTAIRRALLGEVHSTCITSAYVVGASHEYSTLKGIRESIHDILLNLKDIVFKSDTLERQEGILLFNGPGIVTAQHIKLPPVVQVVDNTQYIARLEMP-TSIEIHITLENTKTCTSLNTMPTTK------GRFILDAALKPVRNMNYSIHSLGEGDMR-QEMLVLEVWTNGSLTPQEVISQASQNLNDLLKPLLKVERYFQAKQNIHKKRmvHLEGISIDDLQISVRASNCLKKVGIYTIRQLLSYTQQDLFQIKNLGKKSVEQIVIAIRkyGHILG--------------
102 UniRef50_Q4A8J7 DNA-directed RNA polymerase... 218 3e-55 1 28.1% 5:310 1:324 ----MKKHAkySENLVEQVNEFETSFEIKPLERGLGNTLGNALRRTVLSSIPSCAVFGVKIEGIKHEFTVLDDVIEDVVTILNNLKRVRFFYNPSVFSQNSIHvqKAGQIYARDIESHSGLKIVNPDLYIADVSKVGA-LKFELFITNGKGFVDFETNKKYVNeqIEGSVLAVDSDFSPVLNANYQAVEINSASPIIEEKLNFSIKTDGSIFAKDALSQGAKILIAHLNLLADVENLNKFSADFFGDQEIKEEPisIDALDLSVRSLNALRRAQYYKISDIEKLSQDDFENIKNLGRKSVQEIMEKLQNY-------------------
103 UniRef50_Q14GG5 DNA-directed RNA polymerase... 216 1e-54 1 37.7% 4:324 2:317 ---ALENLLHPTNIKIDEYAKNATKFSFEALERGVGYTLGFALKQTMLYSIAGACVTSIKidGKVTSLEDVIPCDETVADIILNVKSLPVTleGVETGTITFELSGSEEEIFSEEAKLSEGLAITEEVFICSYNG-GKKLKIEAKVEKGVGFRPA-------QDNFKDGEFLLDATFSPVVFCDFEIKDARVGRRTDLDKLELNIKTNGNVNCEEALRLAATKIQNQLRNILDIEEikGIFVEDPTKDINPILLKHVEELNLTARSSNCLKAVNIRLIGELVQKTENELLKAPNFGKKSLTEIKDKLSELGLSLGTLIENWPQD-----
104 UniRef50_A6CGQ3 DNA-directed RNA polymerase... 216 1e-54 1 43.6% 20:230 2:208 -------------------TSTYGMFVAEPFERGFGATIANSLRRILLSSLEGSSVTRVKIQGVQHEFTTIPGVVEDITEICLNLKSLIVKNSSSTSKTLRIEKHERGVVTGADVITDDQVEVINKDLVIATMTD-DVPLNMELTIENGRGYSPASEHAQHDSE---VGVIPLDATFSPVVRVRYKIEDTRVGQRTNYDKLILEIWTNGTVKPDMALVEASKILRKHLNP---------------------------------------------------------------------------------------------------
105 UniRef50_C7LKJ3 DNA-directed RNA polymerase... 215 2e-54 1 29.2% 4:321 2:336 ---FFLKFTKKENLRVLKLTNYEGHFKIEPLYPGWGVTIGNTLRRVLLSSLEGYAISSVKIEGVDHEFATIKGVKEDMTEILLNLKKIRfeEEEEGEKFNIIIKNEKEEITAGDleYIHLFEIINPDLIILN-KKKFIYLNITIVIKKGIGYVPSEENEKHINTN---GTISMDSIFTPIKKVKYTIENCSVSKNSTYERLFFEIKTDGTINPKDALIKASNLVIRHLKLLSNKkyKKKKQTNENYLKLRNILNSSLERKNLSVRTLNCLKKAKIFTWGDLIKSNPT---NFKYLGKKSLEELDLIMKKLTIYYGMNLEDY--------
106 UniRef50_B2Y1Z1 RNA polymerase alpha chain ... 213 6e-54 1 24.2% 10:319 16:340 ---------KCLEYRVESKRSHYGRFSLSPLLRGQGGTIGSALRRTLLRDVEGTNVTHVKFFnvKHLfsTILGIEESVHDIIMNLREIVFRCELHGIHKAYIYTVGPKNVTAQDIILPPFIQIVDGTQHIASITKP-IHLHVTLKIEKNWGETTESIHPITKYFTRYIPTEIF---YMPVRSVTYNVYFYKDEYDiiYDILIFELWTNGELTPKEALYEACWRLIDLIIPlkESIPLPIVSNMNRTQEDLFVQHLFIDQLGLPSKISKSLRESHIYRVSDFMNYSQQDLKNLEYSKKESIEQTLEILHKygINLTLRKD----------
107 UniRef50_Q6KI29 DNA-directed RNA polymerase... 210 6e-53 1 28.4% 5:314 1:328 ----MEKFIKitENKTKRINDFSTSFIVQPLEKGLATTLGTAIRRVLLSSISSVAPFAVKIKGVEHEFMAINKVTEDVPQILLRLRDIKIAYNPekIYKLSLKskEAGDIYAKDFILPIGAEIVNPGLLIATTAAANV-LEIDVFVRAGRGYVDFEENKKYIDEIKtgQYIAVDSNFSPIEKVSFSSSELNTSSVIVQEKLEMEIVTKGTIDAKNAIAQAAKILVAHLNIIGDVNSLNIKDIFEEGNTEKetQNILIQSLDLSIRSFNALKRANYTTVQQLEALSLDDLKNIKNLGEKSINEIVEKLEKYNVFL---------------
108 UniRef50_C0JX08 Alpha subunit of RNA polyme... 208 2e-52 1 26.4% 13:319 37:349 ------------QRETDQELLLYALFQLGPFSHGQGLTIANGLRRTLLNNIIGFGITSVKFEPkiHEYSTIPGIWESIFEIIENLKKIKIRRENseKQVIRITQDKPGVLRADSIKLPPFLKILNQNQPIVSMMSSNLILDIIITIEAQTGNHLCNNQ-----------FIHVSEVCLPIKWVNYVIKTDPLLGSKSPESLFFEISTDGTITPQEALSKAADICIDLYSCFSTAQKevKEKVTEEVKEEIITNKVTIENLGLSVRAYNCLKRANIYTVTDLLTKSKSDLLAMKNFGKKSADEVYEALQN---RLGIDLP----------
109 UniRef50_P38018 DNA-directed RNA polymerase... 208 3e-52 1 24.8% 5:323 1:336 ----MEKIQkyKELVAEKVNDFNTTFVIEPLARGYANTMGTVLRRTLLSSITSVAPFAIKINNVEHEFQTISGLKEDAITLVRNIRNIRFVYNeeNLAKISFKTNKEGEIFASDIPEVSGLEIVNKDQYIANIA-KGGSLEFDLFLRKGRGFIDFEENkrLESSIKNGQFLAMDSDFSPVKKCAISFEELNSSSKLIEERLKIKIETDCTVSAKEAIEQAAKIIVAHFQIIGNINALETIELFEENKEKKERetTPITKLGLSVRSENALRRAKYNTVEEVLGLSDEELSNIKNLGKKSIQDIIEKRNEWKERIGYDDGQSDN------
110 UniRef50_D1GJR1 DNA-directed RNA polymerase... 206 8e-52 1 25.1% 4:310 2:361 ---LMSSKCKCVDLDLLNTNEFYGHFVFTALEKSQGNTIGNVLRRTLLSNLYGFRIVGVRFAGINNEFALLEGVREDLFEIILNLKEIIILNSndQTCYGRLKVYGPAVITAGSLELPNNVKILNPNNHLLTISDESL-IEIEVKIEAGKSYILAKDQKLEGA----LDFIPIDSNFAPVLKVNWYIISLPQDGESINEELHLEIYTNGTLLPHQALLQARTMIGYMLSpfSCLDTYEKEEIHDTNHIKsdLEYESLKNLGLSNRIINALNKVNINFISDLIHYPSSSLINIVGLGPKSVEEIKNKLNQF-------------------
111 UniRef50_C7BEL8 Alpha subunit of RNA polyme... 204 4e-51 1 27.4% 1:314 1:365 MSN--NFFVSCLESRMEQETSWYSRFEIGPFQAGQALTVANSLRRTLLSDQQGVFLAAVEIDGAIHEYSRLEGLKESILDILLNLRQVSVLLTDdeTFVGYFDLQGPMEVKAKDLKFPKQIECGNPNQHIATLTR-NCTFQGRFLILTNPGLTFKNQSIGdgNRLLEKNWLYVNPITNAIRRVNYVVEQFG-DVWEQKEVVVLEVWTNGTIHPKQAIHSACTKLSTLfnLTVKPMTEFSGQESPAGDKLTILFDLDIANLQLSLKTYLVLKNAKIQNIGNLLQYNKSDLTRLLNLANSQIEEIETALNVFGLAF---------------
112 UniRef50_Q98Q08 DNA-directed RNA polymerase... 194 4e-48 1 28.6% 1:315 1:329 MKKMVQ--IKYKEVKTKRVNDYETTFKIEPLERGFGSTIGTALRRTLLSSITSVVPFAIKIKDVDQEFDTISDIVEDVQMIMLNVKNIHLVYdeDNKIYRGVIETKNEKITSSDLKFppEIEIVNKDLEIAT--NNGQkfVMEVYFHVGRGYISFEDNKklNSTIKRGKFLAIDSDFSPVEKVKVKVQEINSSSLNIEEELEIEIKTKGTIDTKNILSQAAQILIAHLQVIGDVKnvDVFEQKKQEKVEPSIHSVDITSLDLSVRSINALKRQGYTKLADILTLTEDDLVAVKNLGKKSVEEIIQKLKEYNVTLN--------------
113 UniRef50_B5Y960 RNA-polymerase DNA-directed... 192 1e-47 1 32.4% 24:310 25:308 -----------------------AKLSVLNLPEGEGITLGNALRRVLLGQIGGTGVLGFRLEGLDHEFMVPEGVVEDGLTIGLNLKKVLFKYYGDGVKVLYIKAKGPAEIKAADIVPDADVEVFNLDQTILTVST-DREIYMEIYLTNGVGYRTVEDNKKL--YQFPFRTIYLDTSFSPVRRAEYHVTPAIVDEPGTFESLELIVYTNLAVDPVEVIRQAANFLSEEFRKVAEAKEAAAGEvvEEQAISDEKLDASVEMLNLSRAVLTHLEKANINTIRDLVDVLEHN-ESIPGIGAVRLEEIRNKLAAY-------------------
114 UniRef50_Q3D5K7 DNA-directed RNA polymerase... 189 8e-47 1 42.3% 106:318 1:212 ---------------------------------------------------------------------------------------------------------GPAEITAGDILTDSDIEIVNPDHYLFTIA-EGHSLKATMTVAKNRGYVPAEGNK---KDDAPVGTLAVDSIYTPVKKVNYQVEPARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKamKETEKVNDEKVLDRTIEELDLSVRSYNCLKRAGINTVXDLTEKTEPEMMKVRNLGRKSLEEVKIKLADLGLGLKNDK-----------
115 UniRef50_D1J731 DNA-directed RNA polymerase... 188 2e-46 1 23.5% 1:310 1:356 MQNMSK--CKCVDSDLLSPSELYGHFVFTSLEQSEGSTIGNMLRRVLLSNLYGLKITGVRLPDVTheFNLLDGVREDFLEVILNLKEIILKDENkqSYHGLLKIQGPAVVTAGSIKFSKGIKVLNPNNYLLTISD-DSFVEIHLKLEHGKAYVLAKDQKLEGSTY----FLPIDSNFAPVLKVNSYVKTLPQHIENTDVELHLEIFTNGSLLPHQALLQAKNMIGYMLSTVNKMEfeEPTPEELLLKRVNEMDSGSLDCLKLSDRIVKALKKANINFTWELMDYDSSglIDIKGLGPKSVAEIEKSLRLF-------------------
116 UniRef50_Q4A5J0 DNA-directed RNA polymerase... 188 2e-46 1 29.3% 1:311 1:329 MEKLTKIKHRIIPAKDSQNNSYKKVLKIKGLERGFGNTLAVALRRILLSNITGIAPFCVRIEGVEHEFTALEKVSEDIVTILSNLKKVVLNYDEdqIIKLSLNANEDNRITSNHLTVtpRVEVQNKDVEIATLSKPGV-LKLEMFLRAGRGYVDFEDNKKFIEEKEKElfIAMDSVFSPVVNVAWKVTELNTASLKIEEQLELELETKLGVTPESAIKLACKILVAHFQTIGDLTDLDSDeqSEKQSLEKEEDDMEIRLLNLSMRSQNALAKSGIKTLNELASYPIEKLKEIKNLGEKSREEIIRKLNEYG------------------
117 UniRef50_Q9BAC8 DNA-directed RNA polymerase... 183 9e-45 1 24.6% 4:231 2:226 ---LMSSKCKCVDLDLLNTNEFYGHFVFTALKKSQGNTIGNVLRRTLLSNLYGFRIVGVRFAGINNEFALLEGVREDLFEIILNLKEIIILNSndQTCYGRLKVYGPAVITAGSLELPNNVKILNPNNHLLTISDESL-IEIEVKIEAGKSYILAKDQKLEGA----LDFIPIDSNFAPVLKVNWYIISLPQDGESINEELHLEIYTNGTLLPHQALLQARTMIGYMLSPI--------------------------------------------------------------------------------------------------
118 UniRef50_C7BEY4 Alpha subunit of RNA polyme... 182 1e-44 1 32.2% 1:233 1:268 MIQIQNKFYSCVETRIQSQGEMYARFHLGTFFRGQALTVANALRRTLLGELPYLIVTKVHIDGVVHEFSSIPGVQESVLDILLNLKRLTFTISNKkkTKVFLKIRGPAKVTAADLKLPPHLACVWPNHYIATLSspKQKISievvFEKGKGTESKKILTDSIEKNKKI--FSLDTNYSPIRKVNYVI--YELDSKKNSEYLVLEIVTDGSIEPKQALRFAFKQLTKLFYEFTQ------------------------------------------------------------------------------------------------
119 UniRef50_P56298 DNA-directed RNA polymerase... 170 7e-41 1 26.8% 1:239 1:278 MMKTHNLFVSCIESRVQDQGSLYARFHIGTFFRGQALTFGNSIRRALLSEMPGFLMTDVRIQGATHEFAVLPDVEETVLEILLNLKKTVFVPRIPKNQKFelKNNGPGKVRAADIRLPETVQCVSPEVHIATLTS-GAELSLRfqLEKREGTFKSKTVAQAKTEDGNvdQLFLDTVPMPVQKVNYVIKSL--NAKNGSEYIILEIWTDGSLYPQESVEFALRNLTDLFFQFANISKKSN------------------------------------------------------------------------------------------
120 UniRef50_Q32RU7 DNA-directed RNA polymerase... 170 8e-41 1 24.4% 17:250 23:255 ----------------HNRRLHYSRFALSPLLVDQAMTIGVAIRRALLSEVEGISIISANIVGAVHEYSTLDGVRESVDEILLNLKQIVIKGadHKEYRASIFAQGPGVVTAEHIKFPSSILAVDPDQSIATLLNETQ-LCIELFIRQGIAKQLTRTKKNHQGFF-------IDANFTPVQKANFSIHSVG-DPKGLQQLLLLEIWTNKTLTPAEALYQAHASLLNLFHQISPPLLHKELSPSKNILNQN-------------------------------------------------------------------------------
121 UniRef50_B2X253 RNA polymerase alpha subuni... 169 1e-40 1 29.5% 12:238 27:316 -----------IKEEKENNQTFYGRFYIGPFEIGQSLTMANALRRSLLSEVPGLGLTSVEIEGVAHEYSTIPGVQETVFDILLNIKNIVFKSTtkKAEIGYCRASGPKTLRAKDLLLPAHIQCVNPDQYIATLKSDG-TLNMKLKIrkKKGQSMLKQNKSDLEetRKSKPLLLDPVFMPVTKANYVLELDERVHNSPKELIVLEIWTNGSISPHGALQTAIKKLVRLLGNVKNAKMLK-------------------------------------------------------------------------------------------
122 UniRef50_Q05FK5 DNA-directed RNA polymerase... 167 5e-40 1 22.4% 3:319 2:319 --NFVNNLFTLKKISIKNISFFRSIIRIETFNNSFCDSLGNFIKRVIFLTTNSYKIIYLKIYKIKSEFYDLPGIIENTQTILKNLDNIIIKINNDNVANLIIKKKGPCIITAKDIFSDKNITIFNPNKIIANVSN-NIVFYCIMKCVNSLFKNYTDEFFQFK--IFKENIIFLNNFKSPIISLNYYI--NKKIFNKKLKKLFFDIETNGSIKPVDCFKNCIFYIKKYFDlfKKYKKINVEKKNNLNLKINSVYLNSINNLKLSIRSLNCLKNNNIFLIGDLIKISKNNLINIPNLGKKSYNEILNSLKNFGLNLNSKIE----------
123 UniRef50_Q20F02 DNA-directed RNA polymerase... 167 6e-40 1 26.3% 1:308 1:302 MKHI---LLSCVESRIEHNRSFYSRFQLGPFDLGQGLTVGNAFRRTLLSELSGVGITLIEIDGVCHEYSTLPGVRESVLDILLNLKQLVLTSDTTfpQVGYLNFTGPGVVTAKDLKLPVSVYCVDPDQPIATL-SADATLNFKFLVCQGKNYIIQTPVDKFHEYQKKILNSKLNLPLSSRTTLNSTFERPNQDSLVGTPLQ----EGVGKTKQNKRLNAHFQRQLKQLNRLKETSFKAYKTKVGEKTISDEFQTNSVNHQNLTTFDLREKKLTDVTT--SLQHGEEATLLKEEGLNknSSPQLENKLK---------------------
124 UniRef50_B2XTD4 DNA-directed RNA polymerase... 165 2e-39 1 29.3% 9:250 4:252 --------IEILESDQNEYNEQYGKFLINSLHPGQGTTVGSALRRVLLTDLPGLAIVGLRIANINTEFSSLPGVREDILEIILNVKDIVIEgsSKPWVLGRLKLKGPGVVTAALIEfdANIQIINPSQYIATI-EVNSSIEMEFLVQTGKNYRLVE---SENSITYSTDFLQIDAIFMPVTKVAFEVTSTKTnsIQDNENLTLEIWTNGSISPIKALVFSASILENLATQLLLNGLKFCQTDLNDVNILD-------------------------------------------------------------------------------
125 UniRef50_D0EVR6 RNA polymerase alpha subuni... 164 4e-39 1 22.3% 7:284 14:319 ------SIFSCLETRIDENtqLYACFQLGLFPKNQGLTIANALRRTLLTESTECSITGVLIEDIKHEYSNLKGIKETVFDILMNLKKIIFFssFFKTQVSFLSEKGPIVLKAKNLKLPSFLFCINPDQYITTLET-NSKINMTIFIDQStnNFFPFKLKKNFTQNQQSNFLFLDTQFCPISNLNYKIKK----KESQKEILFFEIWTNGSVHPNFILKKAIKNLLLNLIPFHSLRNSKIEFEDYENKKIQKIVSQklTNFPISLETYQSLKKLNILTIGDLYRL---------------------------------------------
126 UniRef50_A8Z691 DNA-directed RNA polymerase... 164 5e-39 1 29.3% 7:238 5:238 ------KFKQSKNLRVLKLTPEEGLFKIEPLFPGWGVTIGNTLRRVLLSSLEGYAISSVKIEGVNHEFSTIKGVIEDMTEIILNLKKVRFKKNKKkeVFNMIISNDKEEITAGDlkYINKFDILNPDLIILN-KQKLISLDISIVIKKGIGYVPSEENK---ENLIGSGSIPMDSIFTPIKNVKYKIDNCSINKNSNYESLLLEIKTDGSINPRDALTNASNILIQHLKMFIYETRKK-------------------------------------------------------------------------------------------
127 UniRef50_A6Q046 DNA-directed RNA polymerase... 162 1e-38 1 36.5% 75:252 6:181 --------------------------------------------------------------------------REDVTQIILNLKKVVLAIDSDDERSLEIDVQGPAEVTAADLQAGADVEVLNPDLHIATVAA-GKSLHMTVTAVKGRGYSSADENKQL-REEMPIGVLAVDSIYTPIERVNYHVENTRVGARDDYDKLTFDIWTNGSIKPSDALSLGAKILAEHLNLFMDISPVAAEANVMVEAEPVAV-----------------------------------------------------------------------------
128 UniRef50_B2X1Z0 Alpha subunit of RNA polyme... 162 2e-38 1 22.3% 9:281 95:413 --------LSCRQIVKKNLRNIYGQFYIGPFFIGQGLTIANALRRTLLSELSSLAVTSIQIQDVVHQYQTIQGLQESVFDLLLNMKDIVLKSKtpVPQIGYLQVQGPCIIKAKDLLLPPFIQCVDPEQYIATL-SEDGILNMKFVIRQGknVHSNKNRNSLSLLNTYSKHLIIDASFNPVIKVNYIieKDSVKLESNDSNNFYciWTNGSISPITALKVSIQKLISVFLKIQKSKILNIQLIDSEI-FYRDIFEKLTNQFYI-------LKFKQCQTLSDF------------------------------------------------
129 UniRef50_Q06SF7 DNA-directed RNA polymerase... 159 1e-37 1 35.1% 8:158 20:171 -------LVSCRESIMENKKSFYGRFYIGPLEVGQGITLANALRRALLSELNGLAITTVEIEGVSHEYSTLMGVRESVLDILLNLKQIVLKSKkkRAQTAYIYCQGPGVIRAGDIILPSSIQCVDPEQYIATLSSDGI-LKMKVIIRQGKNYLVQTPN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
130 UniRef50_B9VL93 RNA polymerase alpha subuni... 159 1e-37 1 22.7% 9:241 3:247 --------FYCISSKIEKTGQFYGCFKIGPFQTHSGMTFANSLRRTLLEDNSRYIFDTIQISGVEHEYSSLIGVRESVIDIIFNLQKLIFegKDPKPQIAFLNFTGPGILRAQHIHLPKDFHFVYPDQYIATL-EVDGKLNFKLFFSPKIFQKKYKSLHSKSGSGRQMpyLFLDSDFCSIERVNYTIQSG--NQNPKEEFILFEIWTNGSIHPQKAIYQGINEILLDFFPYSFEIQKRNKN----------------------------------------------------------------------------------------
131 UniRef50_Q4UG79 DNA-directed RNA polymerase... 157 5e-37 1 22.3% 14:286 253:564 -------------IRIPDTGRLYQKFYMGPYPVTMGWTIGSLLKVMTQSRCPGHAVVAVKIHN-MNKDTTVDGVADDLLNIALNFKMVALqlEPGKEARVRTKIKGPAMVCAGALEWPPFVKICNPESYITKL-EEGAELDLEIKIEWGRGFWMAdqKRRDIKEVKEEGFYPTSCVFGGCRMIRLAVHKLMGQRwdPMDQLVVEIWTDVSTTPKHVLEFGLCEVIAWLTELKRQVSHDVDFENEDEQLKDIWEKipVIPLHETDAIPN-LRQEHCQYlgDHTKVPQ-------------------------------------------
132 UniRef50_B3L930 DNA-directed RNA polymerase... 154 3e-36 1 19.7% 14:262 405:675 -------------IKYPQNGRLYQKFYIGPLNITDGHTFGTLLKYVCQTQVYGYAIVAIKVHN-MNEDTRIDNVQEDLLEIALNLSDVCIYSKEIneTNVRLIFKGPLMVVAGMIPLPSHLQVVNKEQYICTL-KEDGYLDISIKIEYGKGHWLTYEKGLYkkEVVEKNYMPISASFGSCRMVRMAVheDRCEFTDPKQMLVMEIWSDCRMLPKNVLLYGIKNIKKILRKFREMIISDTDFPSDVEDEEIKKLWPAIDRYKF-------------------------------------------------------------------
133 UniRef50_B2X2B7 RNA polymerase alpha subuni... 153 8e-36 1 32.9% 5:168 1:165 ----MSQFIicKESRIENNRSFYGCFELGPFEPSQSLTIANTLRRTLLSEIYGLAIVSVEIEGASHEYSSLPGVHESVLDILLNLKEIVLKKSIKnpQIGYLRARGPGVVTGSHLRLPPFIQCVDPDQYIATL-SHNGFLNIKFVVQYG-NKWLASGRMPDSSINLPS-----------------------------------------------------------------------------------------------------------------------------------------------------------------
134 UniRef50_Q9TL28 DNA-directed RNA polymerase... 150 6e-35 1 31.5% 8:175 3:176 -------YIKHIETKRISARTYYGRFCVLPLPAGQGITLGNALRRILLGDLVGFAATSANLAGASHEFDTLPGIRESVLEILLNIKQLVFKQISSRPkrASLNLTGPATVTAKDLVLPSWMKVVDPSQYIATLAS-GASLEFEIQLSQGSGYRLRRTSLVPPGFTLPPPRDPLEP----------------------------------------------------------------------------------------------------------------------------------------------------------
135 UniRef50_B3LBN8 Dna-directed rna polymerase... 149 2e-34 1 17.5% 9:259 290:545 --------FKQIQPVKYHQGRAYTYFFMHSHEVELSPIFLNAFRRVAMKHLKGGRVTALRIPNMKHEFYCIVGVRENFFDLAQNLRQITFKndMDNYITGKFRIKGPMIVVAGHMQLPKGIEIVNKNQYICSV-SAGSYLEMDVKIESIEEYVMPegSQSRNRDICKDNFIHFSSSCTPVEYFGFMGQRRGINLDTLGEINIVEMHTDGSITPKSALLKTIDYISENFQYMENALYNNCHTCDDGSVEEEFRNPEFYMD----------------------------------------------------------------------
136 UniRef50_B7T1W3 RNA polyperase alpha-chain ... 148 2e-34 1 25.8% 20:232 15:222 -------------------DENFGKYIIKPLNLGMGVSIGNLFRRILLTQMPRTNITGVRFAGITNEFSTIKGVREDVLEILLNLKQIIFKGFKEEKTYVRIKITGPTVITSSCLQspDEITLVNPSQYIATITN-DSTLEFELKIESEKKSNLANNQAIFES----SDFLEVDKITSPIRQILFDV--YKKSETETQEELVLQIWTDGSITPIDALITSVKLVQNLFTQIT-------------------------------------------------------------------------------------------------
137 UniRef50_Q06J39 DNA-directed RNA polymerase... 148 3e-34 1 20.9% 6:311 3:354 -----NKLFSCIESRLRGKRNYYSRFYIGPFLKNQAFLYSNVLRRVLLSDSSNIVITAVNIVGAKHEYSLLPGVRESSLDLLLNLKELVFVKdfNKSYFAYLKSNGPKIIRCSDIILPNTIYAVDSTQYIATIsnKSLILKMKLTANlnLNYELNSLLSYYTNDILEKTNFsiDPNFSCVNKVNSSLISL-DNLENYNDSISLEVWTNSSYSPRIIIQNSIKSMVNLFLSIYDTSFieFNTVKYKTSFDKNLTLISIDELDLSIYSKFLLKRHNILTLYDLFKIDKRVLERFYNISYKTLQSIERKMVKYG------------------
138 UniRef50_A3CWH9 DNA-directed RNA polymerase... 146 8e-34 1 17.2% 13:244 2:276 ------------EIAFSRLDERVAKFTLS----GVSMSFANMLRRAMISEVPTLAIEDVRIYDNTSvfDEMLAHRLGLIPLRTDLkcTCEdgCPVCTATYTLSVEGPKTVYSSDLIpdPDAAPADEKIPIIELAR-DQKLVLEAQAIVGTGKEHAKWQATTACGYKNYPVIAIDERCDGCGmcRLCErePAIHIGTDAERFIFVVEGDGSIPVREIIERALQYIQKSSDDLVDVMNEITGEGTE-------------------------------------------------------------------------------------
139 UniRef50_Q8HUH2 DNA-directed RNA polymerase... 146 1e-33 1 27.1% 1:170 7:192 LKKIMTkfIACKESRIENNTNFYGCFYLGPFDESLSQTLANDLRRTLLSELTGLAITSIEIEGVLHKFSTLTGMKEPVLDLICNLQNIVLRKetKKTYIGFLSVNGPRVIKAADLKLPAGLQCVDPNQYIATLA-EDGFLNMKFNINEGKNYIKQKPYNLDVTTLKKRNI---------------------------------------------------------------------------------------------------------------------------------------------------------------
140 UniRef50_Q54DH7 DNA-directed RNA polymerase... 146 1e-33 1 18.6% 1:237 1:299 MSQTVSQLTRQPELEILEIKNDSIIFILS----NTDISVANALRRVMIAEVPTMCIDLVEfeFIAHRLGLIPLVSDNIDKFCYTRDCSCSDRCDQCSVELRLNVKcpRDVTSSDLLsnSAVIPVSseIPIVKL-RRGQEIKLRAIAKKGVGKEHAKWSPSCVATYQFQPIIVLNQnySPHqrCVYCLepDLVHLEQKQDKFIFTVESSGALKPEDIVLYAIQIIKRKLTDIQGQMAE--------------------------------------------------------------------------------------------
141 UniRef50_A6YGD4 Alpha subunit of RNA polyme... 145 2e-33 1 28.3% 17:161 20:165 ----------------ETNRSFYGRFEIGPFAHGQGITVANMLRRTLLSELSGLAITAVEIKEASHEYMTLPGISESVQDIILNLKQLIFRSNFdqPEFGFLSIQGPAIIKASHFRLPSFIKCVDPNQYIATLAFNGQ-LNLKVQICQGKNYKFQTPLDLN------------------------------------------------------------------------------------------------------------------------------------------------------------------------
142 UniRef50_C5DHI5 KLTH0E04598p n=1 Tax=Lachan... 145 2e-33 1 14.0% 13:254 7:281 ------------QVKIREATKDNVDFILS----NVDITMANSLRRVMIAEIPTLAIDSVEVefISHRLGLIPLQSSDINDLIYCRDCYCEDHCDRCSVVLTLQAVGESevYAKDLVIVSNLmiQDKdvLICKL-RKGQELKLKCVAKKGISKEHAKWSPAAAIEFEYDPWNKLkaEWPQSKNCEYenEDEAFDYNAKPTTFYMNVETVGSLTVDQVVIRGMKTLQDKVADILFSLKKMDQDKVNFGGTAGMVDQ---------------------------------------------------------------------------
143 UniRef50_Q2WGF4 RNA polymerase alpha chain ... 145 2e-33 1 21.6% 10:231 14:230 ---------RCIEPKVDNERPCHSRSIIPPPKIGQASTLGIAMRRAPPGESEGACTTPAGSPeiNHEYPAIAGVRESVHETSMNLKEIALTAHPSAAQEAHIPIVGPGKVAARDTVPPSSIGIIYPAQHAATVTRK-IRSSTGSRVEGGCGYRRRNMVEYQK------GSPPPDAVSMPIRNANYSIHRLESHSGGikEMPPPEARTDGSPTPGEATYEASRDSANLFSPV--------------------------------------------------------------------------------------------------
144 UniRef50_Q3ZJ77 DNA-directed RNA polymerase... 144 5e-33 1 30.1% 8:160 41:194 -------LLSCIDSRVENLTKFYGRFELGPFAPGQALTVANALRRSLLSQLPGTSITLVEVRGASNEYEIITGVRESILDILLNLKQIVLTSDFesPQIGFLSVEGPGVIRANDLKLPSFIYAVDPNQYIATLSNSG-RLNMKFLICCGKNYITYNPNDS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
145 UniRef50_B8R199 RNA polymerase alpha subuni... 143 7e-33 1 21.8% 2:212 8:226 -KNIMAkfIACKESRIENNTSFYGCFYLGPFDDSLSQTIANDIRRTLLSELTSLAITSIEIEGILHKYSSLPGMKETVLDLICNLQSIVLKksTKKTYRGFLNVSGPRVIKAMDLKLPSGLQCVDPNQYIATLA-EDGLLNMKLNINEGKNFIKQKPHNLDVSVLKKRNLLLQ--NFK--KKAAFSSRKLLLGKHNCKDR----IKTNQATT---------------------------------------------------------------------------------------------------------------------
146 UniRef50_Q8U0E4 DNA-directed RNA polymerase... 143 9e-33 1 23.0% 12:237 4:258 -----------IEVQILEKKEDSIKFVL----KGVHVSFANALRRTILGEVPTFAVDEVEFYENDSALFD-EIIAHRLAMIPLTTPVDRFELddDYTVTLSLEAEGPGIVYSGDLKsdPDVKPVNPNIPIVKLA-EGQRLVFNAYAKLGRGKDHAKWQPGFVYYKYyvLVTTIKPFYIPKDFEEYEGKEIWEEIVP--NTYIFTVETNGELPVEEIVSIALKILMRKADRFISELQK--------------------------------------------------------------------------------------------
147 UniRef50_Q4N9I8 DNA-directed RNA polymerase... 143 1e-32 1 22.4% 14:299 275:643 -------------IRIPDTGRLYQKFYMGPYPVTMGWTIGSLLKVMTQSRCPGHAVVAVKIHN-MNKDTTVNGVADDLLNIALNLKMVSYtlEYGKEARVRTVIKGPAMLCAGALEWPSFVKLCNPECYITKL-EEGAELDLEIKIEWGRGFWMADSKGLYrkEVKEEGFYPTSCVFGGCRMIRLAVHKLMGQRwdPMDQLVVEIWTDVSTTPKHVLEFGLSEVIAWLTEFKRQVSHDVDFEHEDEQLKDIWEKipVVPLHETDAIPN-LRQEDCQYvgDHTKIPQANF-SLPNSGPHS------------------------------
148 UniRef50_Q75B05 ADL120Cp n=1 Tax=Eremotheci... 143 1e-32 1 14.7% 13:263 7:290 ------------QVKIREATKDNVDFILS----NVDLSLANSLRRIMIAEIPTLAIDSVEieFISHRLGLVPLQSKDIDQLVYCRDCFCEDHCDRCSVLLTLHAVGESevYAKDLQIVSDLGGKNIGHPIIqkLRKGQELRLKCVAKKGIAKEHAKWSPAAAIEFEYDPwqDPEAEWPHSKNCEFenEDDQFDYSAKPNTFYMNVESVGSIPSDQVVIRGIKTLQDKVADILFSLKKMDQDKVAFGGPTGDAAPMEVDQDPYS------------------------------------------------------------------
149 UniRef50_P19587 DNA-directed RNA polymerase... 142 2e-32 1 28.0% 2:176 3:178 -KKIQDFFLSCKECILENPRSFYGSFSLGPFKNSQSLTVANALRRTLLAELSNIAITHLEIEGVTHEYSTLVGVRESVLDLLLNFKGIALKNTSpkPLFGYLQVRGPGVVRASDLKFPPMIQCVDPDQYIATL-NENGKLILKFRISDFKNSQENLNFEVSKTFLNIPNFGHFDTS---------------------------------------------------------------------------------------------------------------------------------------------------------
150 UniRef50_A8DR58 DNA-directed RNA polymerase... 142 2e-32 1 47.2% 59:253 19:211 ----------------------------------------------------------IKIDGVLHDYSALDGLQEDVVEVLLNLKELAFNisDENTVAINFEKSSPGPVLASDFADQSNIEVFNPNLVICNVTS--GVLKMELTAQRGRGYELAVNRDVDRNE-KSIGVLQLDASYSPVKKVSYNVEVARFGGRADLDKLVIDLETNGAISPEDAIRISSTILQQQLLAFVNLDSKLLKEPTKKEEEFDPIL----------------------------------------------------------------------------
151 UniRef50_C4R7L2 RNA polymerase II third lar... 140 5e-32 1 19.4% 10:246 3:273 ---------KEPKVNIINAQDDEVELMLSDVN----LSLANSLRRTMLAEVPTLAIDLVEieFISHRLGLIPLVSEDVEEMKYSRDCTCEDYCDECSVVLELSaeGTTDVYSSSLIKVSggEPvdQGILLCKLRNH-QELNIRCIAKKGIAKEHAKWSPCSAIAFEYDpwFEVDAKkwPDSKYATWEEPPKPGEVFDynRFYMTVETTGSLKANQVFSRGIKTLQEKLANVLFELENSRPANTTAY-----------------------------------------------------------------------------------
152 UniRef50_D0FY14 Alpha subunit of RNA polyme... 139 1e-31 1 28.3% 12:191 2:205 -----------KESRIENNKSFYGCFYLGSFDSGQSITVANALRRSLLSDCTGLAIISVKIDAVQHEYSTLPGVRDSVLDILLNFKEIVLksTFFKPVVGYLKVKGPGIIRAKDLRLPPFIQCVDPNQYIATLA-EDGVLNVKFVIMEGKSYYVQKLSSKSNSSISGRYNTKMKSIARSAIRADETRESAR------------------------------------------------------------------------------------------------------------------------------------------
153 UniRef50_B6AC64 DNA-directed RNA polymerase... 139 1e-31 1 19.4% 4:240 56:351 ---TVENILKLIDIKINELTSDYINFDL----IGVDAAVANALRRILLVEVPTVAIETVQIYQNshRLGLIPfiDLDLIDFrlNEKnvCFKLCVECNKYDIDDKNgsKAIYSKDLIWVPMSevVYPDILITKL-RPGQVIEAILYCEKGIGKTHAKWSPVSTATYRLLPEFKFPenPRNCTTCRACIEKfkVEIFKNKHHFIFSIESTGSISPIQLVKTAINILREKSHKINNSIDIFYE-----------------------------------------------------------------------------------------
154 UniRef50_B6KLD3 DNA-directed RNA polymerase... 138 2e-31 1 19.1% 4:238 51:341 ---SIDKFCERTSLKFLSVSPERVVFEL----KGVDAAIPNALRRILISEVPTVAIETVQIWQNthRLGLIPFI---VDPTALNYRQPNQEVTDENALRVSLHVKCTEqvYAKHIKWEPMsrAVHPDILITKL-RPGQEIELKAYLEKGVGKTHAKWSPVCTAVYRLEPEIVFKEspRNCTTCRACIERfeIELRKIKDHFIFSIESTGSVPAPLLFKMAIEILKEKALTFRQIIDLK-------------------------------------------------------------------------------------------
155 UniRef50_O21260 DNA-directed RNA polymerase... 138 3e-31 1 23.9% 9:230 8:220 --------FRPI-IHVLKHDFNSIQVLIGPLEKNFSGSFANLLRKIIFRYTSGVSIIGLKINGIdhSYSLIPGVKEDVLNVLNNLKHLLIQIDDYdpILLTIQKKGPYIIKSKDIICPSNIKILNDDLYICTLEN-DSQIDLTLIGDIGCGYVLSTYFGNRKS------IVYSDTNFCPIKHVSYYVRSY-----TTYEELIFYIKTNGTCNPLFVMKNAFSFLKDKINI---------------------------------------------------------------------------------------------------
156 UniRef50_Q5JJF4 DNA-directed RNA polymerase... 137 5e-31 1 24.3% 12:237 2:256 -----------VEFKILEKRPDSIKFIVS----GVDVPFANALRRTILSEVPTFAVDEVEfeNDSALFDEI--IAHRLAMIPLTTPHERFSLddDYTVTLSLEAEGPGMVYSGDLksDGDVKPANPNIPIVKLA-EGQRLTFNAYARLGRGKDHAKWQPGfeESDEEIVITTIKAFYLPRKFEEHMGKGIREEIVP--GSFVFTVETNGELPVEEIVSIALKILMRKSDRFINELHK--------------------------------------------------------------------------------------------
157 UniRef50_Q8IKB1 DNA-directed RNA polymerase... 137 6e-31 1 19.5% 7:262 459:740 ------NFIKIEeiKYPQNGKLYQKFYIGPLNITDGHTFGSLIKYVCQTQIYGYAIVGIKVHN-MNEDTKINNVQEDLLEIALNISDVCIYSKEIneSNIRLIFKGPLMLVAGMIPLPSHLKIINKEHYICTI-KEDGFIDISIKIEYGKGHWLTYDKGLYKRErvHKNYMPISSSFGACRMIRLTVheDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNIKKILRKFREMIVKDTDFTFQEEEQEIKNLWPAIDKYKF-------------------------------------------------------------------
158 UniRef50_D1Z0V8 DNA-directed RNA polymerase... 137 7e-31 1 17.9% 13:236 2:260 ------------KLEILELGDRKAKFVLS----EVTPAFANAVRRAMLADIPKMAIDYVDIYDNTsmFDEMLAHRMGLIPIKTNLddCKGEGCALCQVSFTLSAEGPCMVHSRDMksDPDTVPADDNVPIIEL-KERQKVVLTAVARLGRGKEHSKFQPVCPPGYKYVPIIEISDKCDSCKQcvFAVDKNKVVVDNPYNcfIFMVETDGSYSAQEIITRAVESIRARSAALNEVLE---------------------------------------------------------------------------------------------
159 UniRef50_P16370 DNA-directed RNA polymerase... 137 8e-31 1 15.4% 13:259 7:286 ------------QVKIREASKDNVDFILS----NVDLAMANSLRRVMIAEIPTLAIDSVEVefIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESevYSKDLVIVSNlnIGHPIilICKL-RKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDpwYEQDseWPQSKNCEYenEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNFASGDNNTASNMLGS----------------------------------------------------------------------
160 UniRef50_UPI000169A5A9 DNA-directed RNA polymerase... 136 1e-30 1 30.3% 4:231 2:223 ---ALENLLHPTNIKIDEYAKNATKFSFEALERGVGYTLGFALKQTMLYSIAGACVTSIKidGKVTSLEDVIPCDETVADIILNVKSLSVTLAEdeTGTITFELSGSEEEIFSEEAKLSEGLAITEEVFICSYNG-GKKLKIEAKVEKGVGFRPA-------QDNFKDGEFLLDATFSPVVFCDFEIKDARVGRRTDLDKLELNIKTNGNVNCEEALRLAATKIQNQLRNI--------------------------------------------------------------------------------------------------
161 UniRef50_Q8PV16 DNA-directed RNA polymerase... 135 2e-30 1 16.0% 13:237 4:265 ------------EVDILELSDRSAKFVLS----RVSMAFANGVRRAMIADVPTLAIEYVNLYDNTSvyDEQLALRLSLIPLVTDIEtcGGEGCPACEVSLTLSAEGPGTVYSRDLIsdPKIQPADPNIPIVEL-KKGQKLVLEAIAHMGYGRDSVKWQAGVACGYKNVPVITIENccSLCRLCEQVCDINAIKVDFYENAFVFTMESDGSYTAKDLTINAANVIKGKAEELLAILDQ--------------------------------------------------------------------------------------------
162 UniRef50_A7AQ59 Putative uncharacterized pr... 135 3e-30 1 20.2% 9:251 207:471 --------FKQIQPLRHHNGKSFTFYYVHSLHTNVIPVLLNSLRRVAKRHLGAGRITALRIPGMKNEFYSIVGLREDFFDLSRNLTKVIFRntFHRPLIGRLRLKGPIIAVAGHIELDQtiEIVNKNQYICALSR-DAYLDMEVKIEYIANYVMPEKGPEsnRDITPDGFIHFSSSCTPIEVFAFDGDRRGIDEESTSEIVTLELHTDGSTTPRLALLNCATFIETWFERTYKAFRRDCTRDLDALHEEMA------------------------------------------------------------------------------
163 UniRef50_P37382 DNA-directed RNA polymerase... 133 1e-29 1 20.0% 12:256 5:284 -----------THITIRNISKNSVDFVL----TNTSLAVANSLRRVVLAEIPTVAIDLVEieFLAHRLGMIPLDSSNIDelEYTRNCDCDQYCPKCSVELFLNAkgTMEIYARDLVVSSNSSLGHpgPLICKLRKE-QEISLRCIAKKGIAKEHAKWSPTsnKLQHTDYWFENDADawPKSKNADWEEPPREGEPFNFqrFYMDVESVGSIPPNEIMVQGLRILQEKLAVLVRDLDEEQPTQLSANELNMEENAEM-------------------------------------------------------------------------
164 UniRef50_D0NZD7 DNA-directed RNA polymerase... 132 1e-29 1 20.3% 4:230 28:317 ---FVEQSKRQVKVKIQSLTDDEIVFDL----IGVDAAIANALRRILLAEVPTMAIEHVYIWNNSSIIQD-EVLAHRLGLIPLNVDPREfeATDENTIVFKLDVTCksSVYSRDLEWVPqiRPVHEDILMAKL-RPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPKVElcTMCRNCIREPSWNEKIRLGRQS--DHFIFSVESVGMIKPEELLLEALNVLAEKCNV---------------------------------------------------------------------------------------------------
165 UniRef50_P19387 DNA-directed RNA polymerase... 132 1e-29 1 15.3% 14:242 9:270 -------------VRITELTDENVKFIIE----NTDLAVANSIRRVFIAEVPIIAIDWVQieFIAHRLGLIPLISDDIVdlQYSRDCTCEEFCPECSVEFTLDVRCNEdvTSRDLIsdPNDYVEQDDILIVKL-RKGQELRLRAYAKKGFGKEHAKWNPTAGveYDPDNALRHTVYPKPEekSEYSELdaPYDPNGKPERFYYNVESCGSLRPETIVLSALSGLKKKLSDLQTQLSHEIQSD---------------------------------------------------------------------------------------
166 UniRef50_Q2NFZ6 DNA-directed RNA polymerase... 132 2e-29 1 17.3% 14:238 3:269 -------------IEIREKDDERAVFVVE----GVDDTFINTIRRICLVEIPTLAIEDVNIynDAKMFDEVLAHRLGLIPIVTDLdcDCESGCQHCRVSFLLKEKcsKIVYSKDLKSdpAVKPVYDTIPIVRL-REGEEVELEAIAELGLGSEHAKWQATTTCGYKYYPKIEIdeNCSTCRTCQRLSEKDDNAIVVDFekYIFKIETDGSLKPFDVLTIACDILSEKADNIINFVNEE-------------------------------------------------------------------------------------------
167 UniRef50_A7DUN8 RNA polymerase alpha subuni... 130 5e-29 1 41.3% 83:237 1:151 ----------------------------------------------------------------------------------LNVKGLAVKSYVEDEKTIELDVQGPAEVTAGDVLTDSDIEIINPDHYLFTIA-EGHSLKATMTVAKNRGYVPAEGNKSDSA---PVGTLAVDSIYTPVKKVNYQVEPARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEI--------------------------------------------------------------------------------------------
168 UniRef50_A1RSE3 DNA-directed RNA polymerase... 130 9e-29 1 19.7% 13:246 3:261 ------------KATIVEKTPLFLKAVIE----GAYPSLVNSIRRVIISELPVMAIDYVVisNTSVMYDEMLAHRLGLVPLTTPLQALPPIEdsECTVRLMlnAESDKIVYSGDLVSepDVVPVYKDIPIVKLV-KGQSIILEAYAKLGRAKEHAKWQAALASYYYYPRIKVLDEKCKEECkcTfdICGDRLIVEWDRYKYVFWVESFGNYDVETALREAFRILKKKFSDFITTLTQKAGSLVETK-----------------------------------------------------------------------------------
169 UniRef50_B9Q9G8 RNA polymerase Rpb3/Rpb11 d... 129 1e-28 1 20.1% 16:254 607:895 ---------------IPETGHLYQKLYIGPVPVTTGWTMGSLIKAFAAQRCPGHAVVALKleAEAPMVTQLPNVREDLLEIALNLKGVAFelRPRESACVRVKAVGPQLLVAGMIDWPSFVRVGNPEHFIAKV-EEGGVLDLEMKLEWGRGAWLADLHGLYREEedHRGFYPTSCIFGACTMMRLAVHkdRQASTNPTEQLVLEIWTDASKSPKEVLAFALQDMLAWLVDLRRQLVEDVDWKTEDEDLTAAWKH---------------------------------------------------------------------------
170 UniRef50_B6K900 RNA polymerase Rpb3/Rpb11 d... 129 1e-28 1 20.1% 16:254 146:434 ---------------IPETGHLYQKLYIGPVPVTTGWTMGSLIKAFAAQRCPGHAVVALKleAEAPMVTQLPNVREDLLEIALNLKGVAFelRPRESACVRVKAVGPQLLVAGMIDWPSFVRVGNPEHFIAKV-EEGGVLDLEMKLEWGRGAWLADLHGLYREEedHRGFYPTSCIFGACTMMRLAVHkdRQASTNPTEQLVLEIWTDASKSPKEVLAFALQDMLAWLVDLRRQLVEDVDWKTEDEDLTAAWKH---------------------------------------------------------------------------
171 UniRef50_A9URC4 Predicted protein n=1 Tax=M... 129 2e-28 1 15.5% 8:246 7:276 -------FNSSPRIEVTEHNHDEITFVLKSC----DLALANSFRRVMIAEVPTMAIDAVHieFLAHRLGLIPLTSEAADKFYYPRDclCEMGCDHCQVMLTLDVEgpTHVTTDDLISQaaVKPinP-IVICKLA-KGQRIQLTAFAKKGFGKEHAKWCPTAGIAFEYDPDNALRHTFFEvpKSEFseHEAEYDYKGKPSTYFMTVESTGALPAPLILFSALESLHEKLSNLVRVLDRMDRQESQAY-----------------------------------------------------------------------------------
172 UniRef50_UPI0001C41D0E DNA-directed RNA polymerase... 127 5e-28 1 15.2% 13:236 2:279 ------------EIDVKKQDENSMVFIVRDAEVPFI----NAIRRIAMMRVPKLAIEDVFikNDSAMFDEVLAHRLGLTPLVSDldCDcgEYCPRCSVSFSLNETGPKVVYSRDLKsdSRIKPVYDTIPLLKL-KEDQDVELEAVAKLGIGKEHAKWVPTTVCAYKQYPEITFneNCSLCKTCVRTAKAAGSKFINveNDFIFKIETDGSMPPKEVLLKACDVLDAKTDEFITFSE---------------------------------------------------------------------------------------------
173 UniRef50_Q4P8L3 Putative uncharacterized pr... 127 5e-28 1 18.7% 13:242 13:293 ------------KITVRQLDRDHANFILE----NVDLSFANSLRRIMIADIPTVAIDMVEIRNNthRLGMVPLLSMDCAKALVdrDCACEDGCDRCSVELTLRarGNLEVTSRDLIRSDTiePAAPKHpiAPimSKGQELDIRCIARKGFAKEHAKWSPCSAVGFEYDpwYEFDAKqwPEGPNAECEEPPQEGAPFDYnkFYFDVEASGSMHPAEIVETGLGLLEYRVAQIVQELSMLDDQP---------------------------------------------------------------------------------------
174 UniRef50_O28002 DNA-directed RNA polymerase... 127 5e-28 1 16.7% 13:239 4:264 ------------EIEILEEKDFKIKFIL----KNASPALANSFRRAMKAEVPAMAVDYVDIYLNSSYFYD-EVIAHRLAMLPIKTYLDRfeGCPNCQISFRLNVEGPKVVYSGDFIsdPDVVFAIDNIPVLELF-EGQQLMLEAVARLGTGREHAKFQPVSVCVYKIIPEIVVNENcmACSMCGECVEVCEMNAISVNEtfLFTVEGTGALPVREVMKKALEILRSKAEEMNKIIEEIQ------------------------------------------------------------------------------------------
175 UniRef50_A2F4R6 RNA polymerase Rpb3/Rpb11 d... 127 5e-28 1 19.1% 13:242 14:322 ------------QIFVTAKTSNSIEFRLMNVSRH----FANALRRVMIAEVPTLAVDTVEFFQNthRLALIPFVSEDADKFFYHSQCNclGYCPNCTVIYTIDAHCevEVTSNDLKLIagVKPanPQPVTITKLAPGQTLRLAAYIRKGIGRNHAKWSPVCVSTYHQVASIDfvANFEDCTFCNQCIRTAEVHGHKdrGLFVFNVETIGSLSPENVVTRGFQALTNKLDQFKKNVDELQITY---------------------------------------------------------------------------------------
176 UniRef50_Q39211 DNA-directed RNA polymerase... 127 8e-28 1 17.5% 8:236 6:301 -------YQRFPKIKIRELKDDYAKFEL----RETDVSMANALRRVMISEVPTVAIDLVEieFIAHRLGLIPLTSERAMSMRFSRDCDACDgcEFCSVEFRLSSKctLDVTSRDLYsdPTVTPVdkGIIIVKL-RRGQELKLRAIARKGIGKDHAKWSPAATVTFMYEPDIIINEDMMdiKKAEAMGKPGLIEISPKDDSFIFTVESTGAVKASQLVLNAIDLLKQKLDAVRLSDD---------------------------------------------------------------------------------------------
177 UniRef50_B1L798 DNA-directed RNA polymerase... 126 1e-27 1 16.9% 13:231 2:247 ------------KVRVIELSDQRTLLVLE----GVSPSFANSIRRAIIAEVPTFAIDEVIFFENTTPFFD-EYIAHRLAMIPLRTSLDVLRVDPNRTVVLELSKKAkeVVYSGELksDPLIYPANDKIPIIKM-RKGQKLRFQAIARIGRGKDHSKWSPAAAVGYSYMPIYEldPVECDLSQCSNCIepDKIIRRWDESRIIISYESTGSLRPEEIFSEALNQVKGKLGEL--------------------------------------------------------------------------------------------------
178 UniRef50_Q5CPY6 RNA polymerase III C5 subun... 126 1e-27 1 18.3% 2:241 45:344 -KQTVEEIIETIDIKVNELKSDYINFDIS----GIDASIANALRRILLVEIPTVAIETVQIYQNNGVidEVLAHRLGLIPMLIdfRNEDEDLNEKNSVCFKLNVKCTKdiYSKDLVWIppPKVVTDDILITKL-RPGQSIEAILYCEKNIGRVHAKWSPVCTASYRLLPEfaVPTNPRNCTTCRACIEKFPNKIKLLKDkfIFSIETTGCIPPVELVKTAIDILRKKGEKIKSSVKLFYEQ----------------------------------------------------------------------------------------
179 UniRef50_Q4UCN2 DNA-directed RNA polymerase... 124 4e-27 1 22.6% 9:229 151:419 --------FKQIQPVRHHNGKAFTFFYIHSLHTDVIPVLLNSLRRVAKRHLGSGRITALRIPGMENEFYSVVGLREDFFELVRNLRGVIFKNVPkrPVIATLRLKGPIIAVAGHLKFDneIEVINKNHYICSL-SQGCYLTMDVKIEYISNYVIPEFGPEsnRDITPDGFIHFCSSCNPVEIFGFTGERRGLDEQSTSEIVSLELHTDGSATPRVALLRSATFLLNWFD----------------------------------------------------------------------------------------------------
180 UniRef50_C5LDA1 DNA-directed RNA polymerase... 124 5e-27 1 13.8% 6:258 48:362 -----EEFQRRLKMKVQRASDEVVE----VDVVGIDPPIANALRRIMIAEIPTIAIEKCYVYQNtvIHDEILAHRLGLVPIYCDIDSLKMrtDPDTWICFSLEKVCpmPVYSGDLKwdDPPRPVYDDVLITKL-RCGQELEIKCFCCKGIGKIHAKWSPVCTATYRLMPDIILKenPRACTTCRQCIEpdKVSLGKLKDHFIFTVESVGQIPAPQIFAQAAVVMQNKCRLVKKSLEDQMGKKTARQVKSGEDEAEPME-----------------------------------------------------------------------
181 UniRef50_A5UN55 DNA-directed RNA polymerase... 124 6e-27 1 16.5% 13:236 2:270 ------------EIEVKSQTDDEIVFIVRDAEVPFI----NAIRRCAMVNVPKIAIEDVNirNDSAMFNEVLAHRLGLTPLVSNMDAidDDYEENNSVMFSLKEEGPKVVYSKDLIsdSKIKPVYDTIPLVKL-KEGEKLNIEAVAKVGYGKEHAKWMPTTVCVYkgIDYECADACPRGVLkvRASIRNAQSEGKdhENDFIFRIETDGSMPPKEVLLQACDELGEKADKFIRFSE---------------------------------------------------------------------------------------------
182 UniRef50_B5ID28 RNA polymerase n=3 Tax=Eury... 122 1e-26 1 18.0% 13:234 2:269 ------------EFHILELQDRYIKFEI----KGITPSVANALRRTLINDIPKLAIHKVIFHhsTPLFDEIIAHRLGLIPLPTDldHPPDEGCPLCTVTYTLNKHGPATVYSGDLIpdEKFKPVDPLIPIVKL-KEHQAILLEAEAIMGTAKEHAKWQVTSGVSYkpKNVIKEDDKFipCKEIAEILSFENPEITEDDSWFIFEFETDGSLKAIDTLEYAIKRLKTRFNTLREH-----------------------------------------------------------------------------------------------
183 UniRef50_Q8TVB8 DNA-directed RNA polymerase... 122 1e-26 1 21.7% 9:238 1:271 --------MSPLRVRLYDYRkeRATFIIE----ETSAEFVNTIRRALYTLVPTLRIEEVIIYEnaHRLGLIPLRVDDIDQFEldLCDCGGKGCEKCQVRAELEVEGPTKVYARDLKFdpDVEPAFPDTLITEV-GEDQRIRLEVIAVPGLGLEHAKWKPVSAVGYKGLPELEIDEDKLKEKKITYeiENGEveRETddDAFVFNVETDGSMSLDTAILKALDAIEHKLESLKKNLQKE-------------------------------------------------------------------------------------------
184 UniRef50_B0D0L9 Predicted protein n=3 Tax=A... 122 2e-26 1 17.4% 14:231 11:278 -------------VRIRELKKDRVNFVLG----NVDLAFANSLRRVMMADIPTVAIDMVEieFIAHRLGMVPLLSSNCDeiRSTRDCTCLAGCSFCAIMLVLNvdTTMEVTSAHLDVIpfGHPVGKniLICKI-RKGQELKVKCVAKKGIAKEHAKWSPCSAVSFEYDpwFETDERgwPMSDNGKEEEPPRDDEPFDfnKFYFEVETDGSLGPQEVVMKVLHKLRRTYSKF--------------------------------------------------------------------------------------------------
185 UniRef50_A3MXZ5 DNA-directed RNA polymerase... 122 2e-26 1 24.6% 13:240 3:255 ------------KVSIVEKSQFFAKAVVE----GVPPSLINSLRRVIISELPVLAIdvVVVNNTSVMYDEMLAHRLGLIPLTTPLKDLPPIEdsECTVRLTlnATGDVVVYAGDLVAdpDVAPVYKDIPIVKLV-EGQSVVVEAYAKLGRARDHAKWQAALAsyYYPKVVVKREECREMCKEVCRNLENpgIVVEWEKDKYVFWIESFGNYDAETALREAFRILKKKFEDFLDALSRKAE-----------------------------------------------------------------------------------------
186 UniRef50_A0B9L4 DNA-directed RNA polymerase... 122 2e-26 1 15.5% 14:233 3:258 -------------VELIELRDDRVRFLL----TGVTPAFANAIRRSCIAEVPKLAIDEISIYENTSvfDEQIALRLGLVPIRADdcQCGGIGCPGCRIDFMLTAEGPATVHSRDIksDPSVRAAFDNIPLV-VLGEGEKLVIEGFATLRTGKEHAKWQAGTLCGYKNLPSIEicNNCGRCVkcRLCVEEcaISVVPLEDAFIMSIESDGSINAKDLVRMAAEELKKKALALQD------------------------------------------------------------------------------------------------
187 UniRef50_A2BK79 DNA-directed RNA polymerase... 121 3e-26 1 18.9% 16:242 6:280 ---------------ILDKDRLTIRLYVE----GFGLPLVNAIRRAAYSDVPVMAVDVVefENNTVLYDEIIAHRLGLIPlkYKRPEECEkgDPSCYVVLRLEVegPRevYSGDLesDPDVRPVYDNMPIV-VMAPDQRLRLQAYARLGYGREHAKWMPVSVAAHRYLPILelDEMSDECIRcaAKIREMRSGSIadDKRFILKIESTGALPPEDIVREAARAIVRKAENLLSQLAELRREQ---------------------------------------------------------------------------------------
188 UniRef50_B9HS44 Predicted protein n=3 Tax=V... 121 4e-26 1 17.4% 7:236 5:305 ------SYQRFPKIKIREMKDDYLKFEL----RETDASMANALRRVMIAEVPTIAIDLVEieFIAHRLGLIPLTSERAMGMRFSRDCDACDgcEYCSVEFHLRAKctLDVTSKDLysDHAVIPVdrGIIIVKL-RRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMeiKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSDD---------------------------------------------------------------------------------------------
189 UniRef50_Q9VMX3 CG3756 n=25 Tax=Coelomata R... 120 7e-26 1 18.3% 4:238 33:333 ---SVQAFKEKLHIKIVRNDEDGLEFDL----IGVYPAIANAFRRLMLSDVPSMAIEKVYIYNNTSIidEVLAHRMGLLPLRADPRLFAYrgTEQDTLEFELKVKCSrkVYSGHLKweSAVNCIHDDILIAQL-RPGHELDLRLVAVKGLGRDHAKFSPVATATYRLLpaYLLQNCFSpcSRnrYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRKCRALIDEIEAE-------------------------------------------------------------------------------------------
190 UniRef50_Q9YB53 DNA-directed RNA polymerase... 120 8e-26 1 21.6% 13:243 8:286 ------------SVEVVELDSLRVRLRI----RGYPVVFVNAIRRTVLSDVPTMAVDYAYidNTTAVYDEM--VAHRLGLVVLDSNEAVEKyeEDCFVEVSLEaeTGRYITAGDliSDPQVKPVYPETPLIYVA-PGQRIHVQAFARLGRGKEHTKWSPASLSVLRYTPILIYDSSKAgcLEcrYCAETaaVEVRYDSSNLDLEVESTGALRPEKIVELAIRELEEKVKRFAEAVESVGVEES--------------------------------------------------------------------------------------
191 UniRef50_A3DMQ6 DNA-directed RNA polymerase... 117 4e-25 1 15.9% 13:238 2:276 ------------EINVLEKTPLRLRLYIKDIPLH----VLNSIRRAIIAEVPTMAIDSVVFTMNSSVFYD-EYIAHRLGLIPLTSEAALDKYKSPEEcfVKLDLEGKGelHSGDLksDPDVKPVYDNIPII-VLGKNQEIRLEAYARLGRGKEHAKWSPVSVAAHKYIADIYIDEkcSLCRICEEYCPTDAIRVGWRENEYILTIESTGSLPPKRILIEAVKILENKIDDFIENLRSE-------------------------------------------------------------------------------------------
192 UniRef50_O15160 DNA-directed RNA polymerase... 117 7e-25 1 19.7% 8:236 45:341 -------FEKNFRVDVVHMDENSLEFDM----VGIDAAIANAFRRILLAEVPTMAVEKVLVYNNthRLGLIPIHAddTLQFRLQVRCTRNPhdSSDPNELYVNHkyTRHMtqADLFPEGTIRPVHDDILIAQL-RPGQEIDLLMHCVKGIGKDHAKFSPVATASYRLLpaEELSRCFSpvARVafRNEKLKKVVrrVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELD---------------------------------------------------------------------------------------------
193 UniRef50_A9V9D0 Predicted protein n=2 Tax=F... 117 8e-25 1 16.6% 5:251 40:357 ----LEAIKKKLKIDVTRIED--SEYELEFDIIGLDAAIVNTIRRILIADTPTMAIESVYIFNNthRLGLIpgQPTDANTIVFNLKRVCTKknAPADATNPEDLYENAVIYSRDLEWApgFSVVYDDIVIMKM-RPGQEVNMQLFCEKGVGKTHAKWSPVATASYRLMPehKLQKCFSpvKnfRHDDLRDKVELNRVRDHFIFSVESVGALAPDVLVLMALQELKSKCQRVIDFLDESAQVAAVNANLQDD------------------------------------------------------------------------------
194 UniRef50_Q97B93 DNA-directed RNA polymerase... 116 9e-25 1 18.7% 13:237 2:271 ------------EVKIFKLSDKYMSFEID----GITPSQANALRRTLINDIPKLAIENVTFHhvAHRLGLIPL----KTDLSLNFRDQcgKGCSLCTVTYSINKIGPASVMSGDiiSHPDLVPVDPDIPIVKLGAK-QAILITAEAILGTAKEHAKWQVTSGVAYKyeDWAKIKERCpgCNDLSILFESDGVQIKEDDSRFIFHFETDGSLTAEETLSYALNRLMDRWGILVESLSE--------------------------------------------------------------------------------------------
195 UniRef50_Q54SN4 DNA-directed RNA polymerase... 116 1e-24 1 15.0% 5:237 52:342 ----LNRFKENFKINILSESANELVFEM----IGIDAPIANALRRIMISEIPTMAIEKVYIINNTSILQD-EVLAHRLGMIPIKVDPRKfeYTAEDTLIFQLKVKCEKdvtsKHLIWVPTqrPMEDDIPIMKL-RPGQVIDIQCYCEKNIGREHIKWSPVCTASYRLQPVISVdaRPLDCTMCRECIRDPEFEQNVkrDHFIFSIESTGALKSREIFQEAIKIFIEKCNIVEESINK--------------------------------------------------------------------------------------------
196 UniRef50_A0D2I2 Chromosome undetermined sca... 116 1e-24 1 13.3% 5:229 24:311 ----IKQFQRDLEINILSKTDEKIVFEI----INIDAPIANSLRRIMIAEIPTMAIHKVqiQNTSVIPDEVLAHRLGLIPIIAdeKDDQEEYNELNSIDFTLYAKCEktVHSSSLIWQPkiRPVHSNIIIAKL-RENQELNLRLICEKGVGKRHAKWSPVCTAFYKLMPSITIKnnPRNCTTCRECVREAnvELNKIDNHFIFSIESVGQYEAKDIMLQAIDVFRSKVQ----------------------------------------------------------------------------------------------------
197 UniRef50_B0R4Y2 DNA-directed RNA polymerase... 116 1e-24 1 17.0% 14:237 8:248 -------------VEFVDRDDREARFVV----RNITPAFANGIRRAILVDVPTLSIDTVRfeNSSVMFDEQLGLRLGLVPLTT-----PEDYAAGEAVTLALDVEGPGTAYSGDLVsdPEVEAADENIPIIELKD-DQRLELEADAVMGHGRDHAKHQgaDDDPQMLRGVIEEDDELVPTDDfrYPGKE--VEIEDVDGAFVFHVESDGSMPVEELVLRAVDTLVDRADELEQAVQL--------------------------------------------------------------------------------------------
198 UniRef50_C6UN28 Putative DNA-directed RNA p... 116 1e-24 1 28.8% 36:233 25:218 -----------------------------------AHTLAVALRRTLMARVEGWAVVGLCVDGAAHALARAEGVIEDVLGVAANAARIVFEgcGSRRVVKAVVRASAGVVTAGQLVLPEGLRVVNTNERVCSV-GAGCVFRAEFVVARGVGYMRAA-QARARWSRVLAGYTVVDAHFSPVKRVSYKVSSAEDDRSCDRAQLV--IETNG-VDGAHAVVDACRELSRCFQLVGC------------------------------------------------------------------------------------------------
199 UniRef50_B6KGB1 DNA-directed RNA polymerase... 115 2e-24 1 16.8% 13:256 152:474 ------------SIVVKEVSQNKVKFLLENC----DVSIANGLRRVMISEVPSLAIDLVTVYEnsHRLGLLPIDSTRVAEFVNRDDCDCADHCSRCSVQYALDVVCERdvTHRDIVADndLGCPMpgIPIVKL-RKNQSVNMRMTATKGIGKVHAKWSPVATASYKFEPEIAFEenCIFCDQCKVKAQELgvRVEPNERKFHFTVESTGVMPAEQIVEMAFDILLNKVTELEGLVSQASARATGASTFASAAEARP-------------------------------------------------------------------------
200 UniRef50_P07703 DNA-directed RNA polymerase... 114 6e-24 1 18.3% 5:233 33:330 ----VEKFKKDFEVNISSLDAREANFDL----INIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVidEVLAHRIGLVPLKVDPdpDDEKFTDENTIVLSLNVKCTRnvYARDLKFEPqvVPADPDILLAKL-RPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLpaRRFQKCFPpvKDarYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLKN------------------------------------------------------------------------------------------------
201 UniRef50_Q8SRR5 DNA-DIRECTED RNA POLYMERASE... 114 7e-24 1 18.8% 14:236 4:237 -------------LTVEELTPEHIRFTLSNTTVGY----ANALRRILISEVPTIAIDMVEIenNTVLPDEVLAHRLGLIPikYKEECSCSGFCSECSVVFEIDvdTLRTVSTRDIVCDEEDVIIKSGPVITKLAR-DQGLKARCIGRKGVGKTHAKWSPVsiSFEYDKDNVRRETNYW----FEESIEEEWPGVRQGedKIHMCVevEGGAGPLAVVLEGLRILKEKVATLSSAAE---------------------------------------------------------------------------------------------
202 UniRef50_C5LCN7 Conjugation stage-specific ... 113 1e-23 1 17.3% 14:261 15:335 -------------IEVTMLTADLIKFTI--FNANQA--IANALRRIMIAEVPTLAIDTVTIEENSSPLFD-EFVAHRLGLLPINSkcQCYSSCPNCTVKYTLDvhGVTDVTHLDIQPVDQGTSIPEsiVIAKL-RRNQQLTMHMEARKGVGKMHAKWNPTGTVAIRYEPVITIdcDFccVTKANYDFkkGMITVKQRTDVVHFTVESTGARPPEDIVMAAIKVFKEKWIRLHEDLGKWEQEFGQPIDPAAAADEDDDDQMG--------------------------------------------------------------------
203 UniRef50_C0JWM7 Alpha subunit of RNA polyme... 112 2e-23 1 24.3% 13:230 32:322 ------------KNTFENSSLHYGKFYLSGLKKGQGITVANALRRVLLYDIMGLGITKVKfsQKLHEFSTISGIRESIlpLDSNQKVSGDSSSDPLLVHEELDISspEYFKSKDWLspNFAQLINPEQYLATilSKFPEFEIEYKIGKGNLFENLDLQSNNEEFLLNSG------PFFPVKKVNYTVEDIKNseRGFSECVFFEIWTDGSLHPEKALSQAFDILLDFFQQ---------------------------------------------------------------------------------------------------
204 UniRef50_D2UXC7 Predicted protein n=1 Tax=N... 112 2e-23 1 16.3% 4:230 49:354 ---SLEDFQENLRINILKRDENDLVFEM----IGIDAPIANAFRRIMLSEVPSMAIEKVVYLTNTSIidEVLAHRIGLVPIRCDPdnEDIILLDNEYILFELNVTCEKtvYSGDLKWVpaIRPVYDDILLAKL-NPGQSIHVQCYCVKGIGRSHAKWQPVATATYRLMPEVVFkaRPMNCTMCRECIREdrIQLSRVKDHFIFSIESVGSIppAEIFRRALKIFWQKCEA---------------------------------------------------------------------------------------------------
205 UniRef50_B0CTH8 Predicted protein n=3 Tax=A... 112 3e-23 1 15.8% 4:243 36:343 ---SLEKFKKNLKVKVQRLSNLSIDFDL----VGVDASIANAFRRIMIAEVPTVCIENVYVWDNTSVVVD-EVLSQRLGLIPLNIDPDLIVMkdRNTIVFEIKLTCEreVLSSHLVWKPAGepTNPNIVLAKL-RPGQDVHVELHAMKGVGKDHAKYCPVATASYRLLPHIKiqKCFSptKEVSVDEHNVrvELSRVRDFFLFNVESEGAYSPERMLTEAIKVMREKLKKIRQAAEALYDQVE--------------------------------------------------------------------------------------
206 UniRef50_C1MVZ5 Predicted protein n=1 Tax=M... 112 3e-23 1 16.1% 1:248 1:333 MAPTTEPKQRSPSIVVQELTHEKIRFAL----LHTDTSVANALRRVIIAEVPTLAIDLVDveFIAHRLGLIPLLSEKAVEMEF---PYDYAGDDESVTDVHFELneTVDVTSNDLVcdPRVAPVnpDIpiVKL-RRGQQINMRCVARKGVGRDHAKWQPVATATYRFEPEITINEELmcLKKAEELGKPGLVDIRAKEDAFHFTVESTGALRPEEIVVNALKVLERKMEVTRGELDILEREQDEQVAM---------------------------------------------------------------------------------
207 UniRef50_D2W3Y1 Predicted protein n=1 Tax=N... 111 3e-23 1 16.5% 13:230 12:312 ------------QLSILALTDEYCKFKLS----NVDTSIANALRRIMIAEVPTLAIDLVEFEMNshRLGLIPLTCLNINSFSYTSDCSCTGHCEKCSVELTLHVKCtrDVTSNDLIsnPSCAPcnENEhiVKLKR-GQEIKLKAIAKKGVGKGHAKWSPVAITTYYIVPDIriNSCPTKvdKCTYCNesIKEKDLGGKREFIFTVETTGSQTPENIVLLGFDTLVGKLAK---------------------------------------------------------------------------------------------------
208 UniRef50_A1RWW0 DNA-directed RNA polymerase... 110 5e-23 1 18.0% 16:237 1:269 ---------------MLSKKQNRLVFML----RNTTPAFANALRRALISEVPILAIDEVIveNTSALWDEMIAHRLALVPLKIdlRDLYEQGKDPQ-VIFSLEEEapRTVLSGHLRFeaGIEPVSKNIPILKL-GKGQKISLTAIARMGTGRQHAKWQPVGPVGYKYKPVVriSTCpmQCSLCRECEEKFpvEVDGDPSNIILTVESIGCLPPEKLLAVAADVLSKKLDNFLEKVQL--------------------------------------------------------------------------------------------
209 UniRef50_D0NY82 DNA-directed RNA polymerase... 110 5e-23 1 17.6% 13:200 8:224 ------------KIDVQELRDDFIRFELS----ETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTD-EFLAHRLGMIPLNfdCDCDENCPNCSVEFTLDvsGVLSVTSEALksDPYIRPVnsGVIIAKL-GPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLnsTYSPEQKAELYKSCPTEVFETDENY---------------------------------------------------------------------------------------------------------------------------------
210 UniRef50_Q1Q053 Putative uncharacterized pr... 110 8e-23 1 26.4% 152:325 198:366 -------------------------------------------------------------------------------------------------------------------------------------------------------FQMAFNYDIAGEDDLAIEYYERCTNLRPAHKNAYMNLGILYEDNGKYDDAIFCYEAVLDVEPMH--ERASFCLKSAKA---SSEMVFDEEASKKQGHEGDVLNIPISDFELSVRSRNCLEKMNIHTLRDLTRISEPDLLTFKNFGETSLNEIKAILIQKGLQLGQSYDGHNIEK----
211 UniRef50_C3Z3J6 Putative uncharacterized pr... 110 1e-22 1 15.1% 7:245 38:288 ------SLAKFEEVKVPSEHRVVEGSELEFDMVGIDAAIANAFRRILLAEVPTMAIEKVFVHNNTSIidEVLAHRLGLIPI------------HADPRLFEYRQEG-------------DIKPVHDDILIAKL-RPGQEMDLKLHCVKGIGRDHAKFSPVATASYRLLPEIVLTecFSpvKkcSREilKDCVKLNKLRDHFIFSVESTGALAPDVLVCEATKVLMGKCRKFLSELDAAADTEQQN------------------------------------------------------------------------------------
212 UniRef50_Q5CSH3 RNA polymerase II B3 subuni... 109 1e-22 1 18.7% 9:233 7:319 --------MRSPKAEITELTPNSIRFTLS----NTDLSMANTLRRIILAEIPTLAIDLVTmeFIVHRMGLIPLDSTNIRDFNFKDRCECQERCNKCSVEYLLDVTCEgnVTHYDIQpdDSVDGMNNGILIAKL-GPGQRIAMRMTACKGIGKFHAKWIPVSVATFTNEADVRInvNCCpcIFCNEciNPVLIRVDTKPDKFHFLVESTGALPVESIVELAFEILQEKLNTLSR------------------------------------------------------------------------------------------------
213 UniRef50_Q4FY45 DNA-directed RNA polymerase... 109 1e-22 1 13.3% 7:254 4:278 ------EIVEC--VKNEHAAGETLTFQLS----EVDSSFANALRRVMLAEIPTLAIEYVTIRQNTSVldEMIAHRLGLVPlrLNFPQDcgSGCPDCQITGSLKVQCpkQVFIGDsiDDAEVYPVSAEEhlVTLGRS-QVLDLHVVIRKNIAKTHAKFMPVATVAMRYAPEIILNPnaRCPRNVFRFVERTGQVEVQDEDACIFCRECTSQEPPFDRLPEPLVFVRQKKNKMGYFDFTFTVESTGVLPVLQIVYD---------------------------------------------------------------------------
214 UniRef50_B3L5N8 DNA-diDNA-directed RNA poly... 109 2e-22 1 13.9% 5:241 41:333 ----INEFEKNLEMKMHKNEENLLILEVKNLNV----SIANALRRIMLAEVPTIAIEKVNIFQNTGIidEILCHRLGLIPflINFKEEYEKYNHLNCFCFKLHVktSQSIYSRDLKWCppPKVVDDNILITKLAN-GQEIELICFLEKGIGKTHAKWSPVCTAVYKMYPSFSFNTcpLNCSSCRVCIEKykISFEKVKNHFIFTIESTGCFSSADIFRKALLILKDKVVSVKEVLEDQTKT----------------------------------------------------------------------------------------
215 UniRef50_B9GFY9 Predicted protein n=5 Tax=r... 109 2e-22 1 15.2% 5:234 80:388 ----LDSFRENFRIKVIALDKDKMEFDM----IGIDAAVANAFRRILISEVPTMAIEKVFIANNTSVIQD-EVLAHRLGLIPIKVDPRLFEynEKNTIVLKLHARCNrsVYSQELKWLPNGsaGNpdIILAKL-GPGQEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKgcTLCRECIRGdrVALHRVKDHFIFTIESTGALPPEVLFTEAVKILEAKCERVITE-----------------------------------------------------------------------------------------------
216 UniRef50_B0EJB9 DNA-directed RNA polymerase... 108 3e-22 1 15.0% 11:244 4:291 ----------QPRIIKISESPEKVEFDA----MGIDVSVANGLRRIMIAEVPTMAIEMVVLEDNSSAidEMLCHRLGLIPILADPRKFKFPKdeEDTIVFTLDVTCTLdvYSSDLIWEPqiKPVFDDILIAEL-QPHQHIKCKLFCCKGIGQDHAKFSPVCPATYRLMPkeLIVKNPRNCKMCRECIREERSEYIkeENHYLFSVESTGIYPAKEIFSEAVKIMKSKAEKLVTELENRKQQQND-------------------------------------------------------------------------------------
217 UniRef50_Q57648 DNA-directed RNA polymerase... 108 3e-22 1 18.1% 14:240 2:191 -------------ITIKEKRKTRieFI---FSLKAPISFSNAIRRIMISEVPTFAIEDVYIYENSSSMDD-EILAHRLGLIPIKGKPLL----ENEVITFTLEKEGPCTVYSSDLKSENG-EVAFKNIPIVKL-GKGQRIQIECEAIPGIGKVHAKWQPCNAVY-----------------------------KQIADDEVEFFVETFGQMEAEEILEEAVKILKNKAESFLQQLEMIEQ-----------------------------------------------------------------------------------------
218 UniRef50_Q235X0 DNA-directed RNA polymerase... 107 4e-22 1 17.4% 3:232 38:333 --NTFKENIKIEVIRYDNKNK-----ELEFDLMGVDAPIANALRRIMIAEVPTMAIHKVYIYQNTSIidEVLAHRLGLIPilFEEKQEEDEYNEKNSLKFTLKIKCSkiVYSGDFKWVSqiRMVHDNIIVAKL-RENQEIICEVICQKGIGKTHAKWSPVCTAYYRLMPEININSdcTMCRECIREDEEFNSKIELAKKKEHF-IQSVGIYEPHEIVKEAIQILKQKASSFM-------------------------------------------------------------------------------------------------
219 UniRef50_P16925 Conjugation stage-specific ... 107 6e-22 1 19.0% 12:248 4:310 -----------IKLTLTNLEEFKCEFTLENC----DISLANSLRRILLAEIETIAIHNVKVYENTSSLPD-EYIAHRLGLIPLNsnCNCQGECDRCTIHFDLRVSNFteVTSLDLKqeDAVRPinkgIPIIKL-SKGQQIHFECEAQKGIGKMHSKWNPVCISTFSVEPEIIFDqkCMYCEECVYKckPKLIKIDHKKDKFFFKVETTGVMKPVEVLRRGFSTLRQKLDFMREQIQENSNNQFEYGNE---------------------------------------------------------------------------------
220 UniRef50_Q4PBM5 Putative uncharacterized pr... 106 1e-21 1 17.2% 11:179 92:302 ----------NLKVIVTRLSDASCEFDL----IGVDASIANAVRRVLMAEVPTVAIEHVYIWNNTSIidEVLSHRLGLVPLAINPDKVAMRmdDSNTVVFHLKAKCErnVYSEQLRWDAKgrPVQDKILIAKL-RPGQELDLELHCEKGIGKDHAKFSPVATATYrpIPDESIdsCFPP------------------------------------------------------------------------------------------------------------------------------------------------------
221 UniRef50_UPI00016C3B80 probable DNA-directed RNA p... 105 2e-21 1 26.6% 152:320 209:372 -------------------------------------------------------------------------------------------------------------------------------------------------------FRLGFLNDQQGNDHEAIGYYERCLKYPPVGKGVLYNLGVLYEDNDMYDKAADCYRRLAKADPRD---ERAKLFVKDSEASLTMHYSPEDEQLTQANRV--VLEIPITDFELSVRSRNCLKRMNIRTLGDLTRVTEPQLLASKNFGETSLDEIRAIMVTKGLRIGQSLDQ---------
222 UniRef50_UPI00017936CF PREDICTED: similar to DNA-d... 105 3e-21 1 16.6% 7:229 27:313 ------EFVKNFKINIISRSDNDLEFDL----VGIDVAVANSLRRVIISEVPSMAIEKVHIYQNTSylDEILAHRLGLIPLKADPRQFKMKEDEndSLVYEMKIKCTkpVYAKHIKWLpdVGIISDDILIAKL-RPGQEIELKMFAVKGIPKDHAKFQSVCTAWYRMMPNIklQSCfsSRNVFRYKQFDNKILLSKIQDHFIFTIESVGAMDPSLIFLEALNILTRKVN----------------------------------------------------------------------------------------------------
223 UniRef50_B4I197 GM18508 n=2 Tax=melanogaste... 103 6e-21 1 18.4% 43:238 66:331 ------------------------------------------LRRMMLSDVPSMAIEKVYIYNNTSIidEVLAHRMGLLPLRADPRLFAYrgTEQDTLEFELKVKCSrkVYSGHLKweSAVNCIHDDILIAQL-RPGHELDLRLVAVKGLGRDHAKFSPVATATYRLLpaYLLQNCFSpcSRnrYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRKCRALIDEIEAE-------------------------------------------------------------------------------------------
224 UniRef50_C4V9J5 Putative uncharacterized pr... 103 6e-21 1 22.1% 13:234 2:230 ------------KILIEESTDNIIKFTL----RDTYVSYANALRRILISEVPTVTIDLVEIenNTSLPDEMISHRLGLVPL-YTKKDLVFriCDKCSVSLTLNVSnpMVVTCKDLKSQDDV-VIRSSPVICKLGTR-QNLKVICKAFKGVGKIHSKWSPVSVvfEYDSGNRSRSTTYWRETDVDNECKEEEANLIDEITEVKMCVevEGFGRPVDILRKGLEILKGKYETLRNE-----------------------------------------------------------------------------------------------
225 UniRef50_C7DIN8 RNA polymerase insert n=1 T... 103 9e-21 1 16.3% 13:233 2:185 ------------EIEVLRDDDKVFEFVLKGATANY----ANALRRIAINGIKAFAIDKVTVynTSSMFDEYIAHRIGLVPLIT-----PHGSSDKDEILFTLEAAGPGTIYSKSLesDKSVVVANPNIPIIKLGR-DQKIRIEGKAVMGSALKHAKFQPGL---------------------VTYEA--------TADDEFKFYVETFGQMPPRDIIIKACDAIKENMKEFSK------------------------------------------------------------------------------------------------
226 UniRef50_Q7UWL0 Probable DNA-directed RNA p... 103 9e-21 1 26.1% 152:327 252:426 -------------------------------------------------------------------------------------------------------------------------------------------------------FGLALENDRLGNDDEALRLYERAAKAFPTGIGALINLGVMYEDNGQYDKAQLCYKRILDCHPDHP-----RTQLYMKDASATGNMLYDEEAQRRNDRLAQTLNMPVANFELSVRSRNCLQKMGIETIGDLTRHSEQELLSSKNFGETSLVEIREMLSQKGLSLGqkKSNDPPVDTS--
227 UniRef50_Q6Z5L9 Os02g0723600 protein n=2 Ta... 102 1e-20 1 15.2% 2:231 60:295 -SVSAEKFCKNFKVEISRLTEDDMEFDM----IGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIAD-EVLSHRLGLIPLDADPRHFEynERNTIVYKLHVSCKktVKSGDLEWLPEG----SRLPLASPAQSRYKQKTYTSFSQSQKDILEKPLGVKFKDITIARLGPGQVVFRKEIkaEKLVKKCPVNVFDIEDLGNVTIESTGGLPPEALFTEAVRILEEKCERV--------------------------------------------------------------------------------------------------
228 UniRef50_D1J901 Putative DNA-directed RNA p... 102 2e-20 1 20.0% 13:237 2:211 ------------EVKIADRGEKEVVIALS----GVKVRFANALRRVMIAEVPKLAIDELNIRENTslYDEQLALRLALVPLKTDLK----DYKEEDQITLTLKATSPemVYSKELISspKVEAASENIPIVKLIsaRQKIDLDAIARWGRGEEHAKWQ--------------------PVTICGYKNISDE-----DVNNLLFTVESDGALPVDEIILEAARIMQEKCERMVEALKE--------------------------------------------------------------------------------------------
229 UniRef50_Q4UFZ3 DNA-directed RNA polymerase... 102 2e-20 1 18.5% 13:239 11:325 ------------SIEVVDLRKDRMDFIL----LNSDVSTANAIRRVILSEIPSLAIEIVTveYISHRLGLLPIDSTLASEFEFRDRCQCTDKCAKCTVDYTLDVScsRLVTHFDIVPdpRADVTndGIPIVKLKR-GQSINMKLTASKGLGKFHAKWIVANVNyfKYTGVRSENPSFLgcDEcnYcgHKDLIRIQPDESKFHFTIESTGSIPPEKILEIALIVLEKKLQDLQSNFTEAQ------------------------------------------------------------------------------------------
230 UniRef50_C3N054 DNA-directed RNA polymerase... 102 3e-20 1 14.4% 13:234 2:259 ------------SINLLHKDDKRIDLVFE----GYPLEFVNAIRRAAMLYVPVMSIDDVyiENNSPLYDEILAHRLALIPfrWPEECicTENCEKCYTKIYIEAeePKMLYSKDIKsdPSIVPISGDIPIV-LLGANQKISLEARLRLGYGKEHAKFIPVSLAIVRYYPKVEILGNckNELACTLCEECLriRISSIEDKYILELESVGSLKPERILLEAGKSIIRKIEELEKK-----------------------------------------------------------------------------------------------
231 UniRef50_Q0CY78 DNA-directed RNA polymerase... 101 3e-20 1 20.5% 4:174 44:256 ---SLDKFRNDFKVEFHRNAPFEASFSL----VGLDAAIANAFRRILMAEVPTLAIEYVFVHNNTSVIQD-EVLAQRLGLIPLktDDDPESgsDYNTIVLRLDVECTKnvYAKDITfdDAIQPVNPDILIAKL-RPGQKISMELHCIKGIGADHAKFSPVCTASYRLLPDIKIE-----------------------------------------------------------------------------------------------------------------------------------------------------------
232 UniRef50_B7G229 Predicted protein n=2 Tax=B... 101 4e-20 1 15.0% 8:241 3:320 -------YQRFPRVEILSIQPQEIKFILS----ESDTSVANTLRRIMIAEVPTLAIDLVEFHENSTVldEYIAHRMGLIPVRYqrECVCYEHCMRCSVEFELDITypLTVTSKDLVSNNEleAQDEGVAIVKL-GPGQRLKLKAIARMGISKEHAKWCPVAVATYrpDRILELDEVTGDIriCTYteDDDFVTVTQSKDRFIFNVETTGAMDADEILLSAIRVLRNRLNYLAQELENLKDM----------------------------------------------------------------------------------------
233 UniRef50_Q4UFV7 DNA-directed RNA polymerase... 100 5e-20 1 18.8% 5:169 26:219 ----ILEKVKNLQIKFLKKTPEFSVVEI----AGLDVSFANALRRILISEVPTLAVETVQIYQNthRLGLIPfiDPDLFNFKSSSKndCEEINDKNSVCFKLKVKYNksIYSNDLKwdNPPKPVYGDILITKL-GPGQEIDLNMYLEKGIGKVHSKWSPVSTAVYKFMP----------------------------------------------------------------------------------------------------------------------------------------------------------------
234 UniRef50_Q06FN2 Putative DNA-directed RNA p... 100 5e-20 1 15.7% 12:247 13:246 -----------LECKDLHNDLLYGRFALSPLTAKESRLLKKGLREALLTGILCLRFTHAKIQNanLNLMNIVGIQESLDEILKNFGKIILTGkgKGPFVAILDVRGPLNAMAVDIELPPGIKVEIETQHIATITEP-IPFVVELRIEL-----VSSTSKGETGITDEEGF-SIDPNP-PIQKVNSSIQGYEYGGQT-FQTLFIEILSTSPTVPNKALLLVSMKIMNLFQIVLQAKYLDYKELEKGIH----------------------------------------------------------------------------------
235 UniRef50_C4V751 Putative uncharacterized pr... 100 8e-20 1 19.2% 3:242 21:293 --RTFNEMMENIKLDIIKKEHLVLEFDL----VGVDCSVANALRRILINEIPTFAIENVFIFDNTSVLPD-EFLAHRLGLIPLDVCPDLEVGDFHFELKKTNTSSEVMTVTSNDIKYipDIEI-SKDIPIAKLA-PKQALIIEMVACKNVGRVHAKWSPVCTAAYRLMPIIKIEdcFSprEVFRHKEFENKVFLGRKNDHFIFTVES-LVLDPIYLVKKALQIINKKLDHLKGELREFQNTN---------------------------------------------------------------------------------------
236 UniRef50_A9A5C5 RNA polymerase insert n=6 T... 99 2e-19 1 19.4% 9:240 6:221 --------FHQDLSSLEVISKDNQKIALK--LKGVPLQYANALRRVCLNGVPVFAVDTVDIIENSSVLPD-EGLAHRLGLIPLKTDLSRFngCSNCKVMLVLD-SGDSDVtsNELSsdDSITPISDKIPIVELA-PGQRIKVECYARLGRGTEHAKWNSA---------------------NVSMLTETDKDDER------ILTVESTGALNPEQIILSGVEEVGHRLAEFKDTIDQISE-----------------------------------------------------------------------------------------
237 UniRef50_Q8SL88 DNA-directed RNA polymerase... 99 3e-19 1 15.0% 5:230 1:213 ----MKLFKISLIKNYFIEGSSYGLfdLQDFSNCDRVAWGNLLRRTLLKDLEGLRfsKIPYYHRVNEYSDIEQVNPSLLQVFSNFRNLHIFSSKpkTSYSMIKVLTSRSYFSKDILLPNNLYVVNPDVQLFEFLSKRYKLRIISEICKGSGK-----------------------SFSPIKKVNYVVEGI------PYASLLLEIYTDLRANALSSLLATLRLINPKFAA---------------------------------------------------------------------------------------------------
238 UniRef50_A3X1T9 DNA-directed RNA polymerase... 99 3e-19 1 43.1% 214:322 201:309 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKSLNELKEILGQVGLQLGLALPEWPPPNVDFLSQQAGKLLERVDDLELSVRSANCLKKDGINHVGELVQKSEDEMLRTPNFGRRSLNEIKDLLAASGLHLGMDLSGWP-------
239 UniRef50_C1ZD20 DNA-directed RNA polymerase... 98 4e-19 1 24.6% 152:318 61:222 -------------------------------------------------------------------------------------------------------------------------------------------------------FRLAEQNALYGNDTEAIRLYEQALSRPPYHLSAMLNLGLLYEDRGNYASAAFCFRRILAFDPNHV-----RARMYMKDIEATQEMYYDDDMARNEARMAQLLSRPVTDFELSVRSRNCLASMDIHTLGDLTRVSESDLLQGKNFGETSLVEIRDLMQQHGLKVGQNL-----------
240 UniRef50_Q5KG24 RNA polymerase II subunit 3... 97 6e-19 1 16.1% 16:238 29:314 ---------------LRNLNETDATFHLS----GVELAYANSLRRVMMADVPTIAIDQVLfeMIAHRLGLIPLISRNVSklRYTRDCDCDEGCYYCMVTLRLKVTFSGnvTSDMLesEEDRIIInpPILIAKM-GKGQEIDVLCKAYKGIAKHHAKWSPLSTVAFEYDpwFETDERawPLSSNAAFEPPPNPAEPFDYntFYFSAESVGSIPVRSVVEQGLDLLIEGLANVVLGVQKE-------------------------------------------------------------------------------------------
241 UniRef50_A8A8W5 DNA-directed RNA polymerase... 97 9e-19 1 19.2% 14:237 3:280 -------------IEVLEETPTSIRL----LAKGYPLAVLNAIRRAALELAPKMAVDFIAVDRNDSTLFN-EVLAHRLAMIPLRSEEALERYAPpcYVRLYLDASAEgiVYSKDLKsdEDVRPVYENIPVVPLIG-DQKVKVIAYARLGRGREHAKWMPATVSIVKpvKEGLCDAEctTLSMVMYCIEYVCEGkvFEEDTYLFELESDGSLSARRTLVEAAKAVVEKLSELKNRLQS--------------------------------------------------------------------------------------------
242 UniRef50_A9SM40 Predicted protein n=3 Tax=E... 97 1e-18 1 17.0% 20:178 34:217 -------------------SRNVLRFKLE----NTDVSMANSLRRCMMVEVPTLAFDLVEIEMNshRLGLIPLTSDRAMEMVFPSECdgDRSCQNCTVEFLLSVKAtkDVTQRDLKSSNdvEivDkdICIAKL-YKGQEITLRALAKKGMGSLHAKWSPVATVTFHHEPEIYINEEKM-------------------------------------------------------------------------------------------------------------------------------------------------------
243 UniRef50_B7XIP8 DNA-directed RNA polymerase... 96 1e-18 1 19.9% 2:187 23:202 -SQSVTDFVNDLHVRIIKHEGLSLEFDL----INSTPALSNALRRILTSEIRWYAFHDVFISQNDSIFPD-EYLAHRIGLIPVKLKASETFQTVDYYLKVSNNTKETINVYSNSIVSTIEIFDIQKDVLICKLAPKN-TISMKLRIAEGIGKTHVKWSPVALCTFRLLPHIKLNRKFTGEDAVRLKN----------------------------------------------------------------------------------------------------------------------------------------------
244 UniRef50_A8ICX5 DNA-directed RNA polymerase... 96 2e-18 1 17.0% 14:178 15:194 -------------ISVRTLEPDYMVFEL----KNTDPSSANALRRAMVAEVPTIAIDLVEMENNTTVLND-EFLAHRLGLIPLVSRNAVYWKRPFeeTAFSLDveGVMDVTSNdlEPDAGVVPVnkPIVICKL-RRGQHLKLVARARKGIGKDHAKFIPVATAVFQYKAQITLSASAM-------------------------------------------------------------------------------------------------------------------------------------------------------
245 UniRef50_B0EHR6 DNA-directed RNA polymerase... 96 2e-18 1 14.5% 10:237 8:281 ---------RQPIITNVECKEEKLSFHIE----RTDTSMVNGLRRVIMAETPTIAIQLVRVYANSSYLCD-EFIAHRLGLIPIDSTQIH-NFEDTDDAILELKKENNsvVTSNDLVsdKRVAPVnvDPIVITQLGPRQNIHMVCYVKKGTGKFHAKWNPTCQcdYQEVGEKVfdENCIFCNECTVYARDIgvTVTPKTDQFVFKVEGTGVYPPKQIIELGLEEMKKKFVNLKKALNE--------------------------------------------------------------------------------------------
246 UniRef50_Q4DDL2 DNA-directed RNA polymerase... 95 3e-18 1 15.7% 35:231 110:372 ----------------------------------ISPPIANMFRRLMMTEVPVLAFDRMLIEENDSVvdELLAHRIGLVPivTESNQVGFdlDPQRVLVFELAAEgsTSVYSGDLKWKprVFLVHPDI-ILTKLGPGQRLKLRAIALKGIGGVHAKWTPVSVCFycPVGVFGVneNCTLCREcmYPEIADKIVVEKDKTRMRFTIESIGQLHASQIFRYALALFAERVRDL--------------------------------------------------------------------------------------------------
247 UniRef50_Q8SL86 DNA-directed RNA polymerase... 95 3e-18 1 16.4% 5:224 1:207 ----MKLIKICVLKNSIFRDTFYSLFDIIYPRSENSLIFANQLRRILLGKSEGLRFLKIsvYQKINEFSEFEEINESVFQLFLNIKNIDLYydANKRFFGTLEAYYPKTYSQDDIILSKNIKLIKKNQHIFSLSSLKLKMKFILEAKKGIG-----------------------SFFTPVKRVNYIIEENKLS----FSRVVLELETDKRRGCFSSTIDAFKVL---------------------------------------------------------------------------------------------------------
248 UniRef50_Q9AW23 DNA-directed RNA polymerase... 95 4e-18 1 15.4% 26:174 9:184 -------------------------FEIKINFNNFPIVYANSIRRIMMNEIPTLAIDKVYieFIAHRLGLIPIFSENADLIKYSRECDCENECEKCSILFTLDveTEKTITSSMVKCSTACYPldDYAIIIAKLNPGQNIKLKAYVKKGIGKEHSKWNPISSIKFRFYPIYQVN-----------------------------------------------------------------------------------------------------------------------------------------------------------
249 UniRef50_A8B9C8 DNA-directed RNA polymerase... 94 5e-18 1 14.9% 1:174 20:227 MVTDLSAFQNRLEYVIWKDECDTFSFDV----INLSPVIANTIRRIILDEVPTMAIDTVVVHENSSIIAD-EIFSHRLGLVPMNIDPRLFEYHEdnTVVFKLDVTAPAtvYSRDIYWVpeVrpLDPDILLAKLA-PGQRIFCEIYCHKGIGRMHAKFQPVGTAWYKMKTQIALD-----------------------------------------------------------------------------------------------------------------------------------------------------------
250 UniRef50_Q8SSL9 DNA-DIRECTED RNA POLYMERASE... 94 5e-18 1 16.0% 2:269 20:297 -AKSFEQTVDEIEIRITEYSSEKLEFDL----INVDCSIANALRRILSSEVPTMAVRDIFLKENESVFPD-EFIAHRLGLVPLEVDPEMfeLDERNSLRFTLDveGVLNVYSDDIRWNpfRDVKFSSRVLMFRLARGQKISAELVCTKNVGKVHAKWSPVCPATYRLMPLIEIGDIF----------DEDAYKLQKCFSEGVIDVrsDGRMKAYVSNPRLDSMSREALRhiGRRSDYFLFTINTVFLDPLYLLEKAVSVLIEKSRALRC------------------------------------------------------------
251 UniRef50_A0DID7 Chromosome undetermined sca... 94 6e-18 1 16.7% 10:243 10:307 ---------SQHRIEILELSDEKCKFSFEG-----DLSIANAIRRVMIAEVPVMAIHFVDIIENTSPLSD-EFLAQRLGLIPldSKMYDWEADAdtKVVFTLRQKnpLEITSQHLEPEFgfSPInkEVGiiTRLGKNQSVHVRCHALKGFGKMHAKWTpqSIRDSCPMNVFAMDAnvNAIEKCVFCEECIriKMQHKKNKYIFTVESAGQLKAADIVQKALIVLRKKVDEISQDLSFAQQQQQ--------------------------------------------------------------------------------------
252 UniRef50_A4RSP9 DNA-directed RNA polymerase... 94 9e-18 1 17.3% 13:174 10:190 ------------SVTVARLEDETIIFDL----KGVDVSLANALRRLMIADVPTVSIDLVEVIENSSVLCD-EFLAHRLGLIPLdvKPYEYTGDDDTATDVHLELnqTRDVTSDDLIsdERVKPvsGGILIAKL-RKNQQLSLKCIARKGTGKDHAKWSPVATAVFKYTPLIDIN-----------------------------------------------------------------------------------------------------------------------------------------------------------
253 UniRef50_A9BKT2 Rpa5 n=1 Tax=Cryptophyta Re... 93 1e-17 1 17.0% 4:244 38:335 ---SISDFRYGISIKAIKKNQEELIFQI----KGFDFSFSNALRRILLSEISIFGIEKVFFYDNshRLGMIPLFvqNFLKIILNLRANHPNNFFKNISIYSKSLKWKKYGVLKSFFKNVPVKPVFKDILIAKL-NPGQKIECECESLIGIGNNHAKFSPVGSTFYKIFPKIKIIsyCTMCKEckYVVPKIRIGRNN--QKITFIIETTGIFSPEILFHRAIFLLVGKCNQSLLSLYQNFQKEEN-------------------------------------------------------------------------------------
254 UniRef50_Q5TY08 AGAP012796-PA (Fragment) n=... 93 1e-17 1 14.1% 5:174 34:233 ----FESFKRKLQIVVVRYDENELEFDMIGVT-----AIANVFRRLMLSEVPSMAIEKVHIYNNthRLGLIPLRAddTLEFELKVKCTR-KNKDSTEVTNNENMYKNHSIYSGQIKWVptVGPIDDDILISKM-RPGHEFDIKLFAVKGVGKDHAKFSPVATVSYRLLPDIKLN-----------------------------------------------------------------------------------------------------------------------------------------------------------
255 UniRef50_D2R234 RNA polymerase alpha subuni... 92 2e-17 1 26.7% 152:316 192:351 -------------------------------------------------------------------------------------------------------------------------------------------------------FGLAVENDRHGNDELALQLYQRAAGTFPTNVGTLINLGILYEDRQAYDRAQQCYNRV-----LEAFPEHPRARLYSKDAAASGNMLFDEEAQRRNDRLAQVLSIPVTDFELSVRSRNCLQKMGVRTLGDLTRTSEQELLASKNFGETSLVEIRDMLHSKGLELGQ-------------
256 UniRef50_A8BBI3 DNA-directed RNA polymerase... 92 3e-17 1 16.7% 13:258 4:326 ------------SIKILSKTDLKLELEIS----GVDISYVNGLRRAIYADVPTLAIDIVKFLDNSTTLTE-EFIAHRLGLIPldEEHSTEIECRECTFKGTLNISNdrVVTDKDIKFdsFGAAETPSIPILKLA-PGESINALLYARKDRGKIHAKWCPAACVVLRPLARIILCDEfeTCPRNVFTIENRRV-VVKDSNSCIFciESNGSISAYDIFLMACDEISARADEILAAATSVFQVSAKADNVIMSIEDDSLT-----------------------------------------------------------------------
257 UniRef50_D2EFK1 RNA polymerase insert n=1 T... 90 1e-16 1 17.8% 13:231 2:244 ------------KAEIVETKDNTAKILLEDFKV----SMVNALRRSIINGVNTLTIEDVKIYKNTsmYDEILASRLGLIPI-----KTPIELKGKGKFSFKLKEMGPKAVHASDLvsDKDVVPAISDMLIINLKD-GEAIDLEAETAWGNGADHSKFTPAHVFYHFYPKITIPNSkcILCKACEDYAGSDVISISSQNDKMIFEIESWGQLSVKEILNEAVSTLEEEVKEI--------------------------------------------------------------------------------------------------
258 UniRef50_Q8I2S6 DNA-directed RNA polymerase... 90 1e-16 1 17.6% 13:165 12:185 ------------QINITKLTKDELYFTLYNSNSG----IANALRRIMLSEIPTLAIDVVNVYENthRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKckIDVSHYDIEspMPIPHGNKniPIVTL-SKNQTLHMKLIATKGIGKMHAKWIPANVSYR--------------------------------------------------------------------------------------------------------------------------------------------------------------------
259 UniRef50_Q2EEW7 DNA-directed RNA polymerase... 87 1e-15 1 15.5% 8:240 2:246 -------LIKQLSSSYNEYNNNYasFLIGPLPEGIAQSLGFNIRSVLLKEFPYFAVKNIRFNPENNNYKTHIGTKESIETIINTILGIDFNYSFDFYKAMGLYKSKpgILYAKDLMLPVGIKCTTPYKIIAHVTKQnlGFTFELGFLFGLNNNIKFENKLYSIKTYPIQNINIEIINS------------KKSFNLNSESIILSFTTKSSLQPIDVIKILSYLLLNKHLILIKAFQQFLD-----------------------------------------------------------------------------------------
260 UniRef50_P48337 DNA-directed RNA polymerase... 86 2e-15 1 14.2% 5:222 1:206 ----MKYLKIYVLRSRLLKDGNLAFFKVKNLQFFDKNFFVTEIRRYLLLDLESWNITNVMFfhVVHNFLGLEELKQSLLEITKKFKLLRFKLCSknKFFAVLNAFEVKDFLSGDIIFPPHLKLLNSRELLFTKISFNITLKILLKIEAKKA-----------------------SFQKPIKRLNLIIEKDEFFDN----YMIFDLTTDGSVTPFNAFIKALQ-----------------------------------------------------------------------------------------------------------
261 UniRef50_A9BL73 Rpb3 n=1 Tax=Cryptophyta Re... 85 3e-15 1 16.3% 9:174 1:191 --------MKNPSLEILNLSNYESKIILKETN----ISILNSLRRVMINEVPTFAIDLLFIefLSHRLGLLPLFSNFAHEFRYTRECDCEQYCSKCSFKFSLDikFPQSIFSTDLNTIdfYQQINPIHylIGKLGIGQRIKLVAIAKKGIGKEHAKWSPISVIKIKKIPFFLFD-----------------------------------------------------------------------------------------------------------------------------------------------------------
262 UniRef50_B7XJB4 DNA-directed RNA polymerase... 84 7e-15 1 16.1% 12:234 4:245 -----------IKLELLELTSTNIKFTI-----NSNVSFANALRRILLGETPIVAIDYIEVEENTSIfdEMLANRLGFLPlkDKNNCTCENYCDDCALVLILNKTNKtnVLGKDLIIEGSGRPAnnNTFICKLA-PNQTLKIKCIARKGlsITHAKYCPVsvSFYYDKNNAKKHTNLWTENQEtfINEDPTEFDYSKVDQITMNVevEGVGKPKDILYKALSIYKEKMIQILNE-----------------------------------------------------------------------------------------------
263 UniRef50_Q74M82 NEQ452 n=1 Tax=Nanoarchaeum... 82 3e-14 1 15.1% 39:230 13:219 --------------------------------------FANLLRRLIMEEAPSMAIEDVYVHQNNVYWNEWFANRLGLIPIYAPID----YIKNDKVVKASLKVKdeGWVYADEIKidENVKIAYKKIPLIWV-EKWHEIDMEFEIKVGQGKVHSKWIPAHTWYYKEvgILKKKDNKTKELINSlaLEKEGILELKETGRIVFNIEGFGMVEEKEILPLAIDVFVNRLDE---------------------------------------------------------------------------------------------------
264 UniRef50_A3Y4L0 DNA-directed RNA polymerase... 81 6e-14 1 93.5% 1:62 1:62 MQGSVTEFLKPRLVDIEQINTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
265 UniRef50_UPI0000E87F4D hypothetical protein MB2181... 81 7e-14 1 18.3% 125:310 3:197 ----------------------------------------------------------------------------------------------------------------------------NLKIYLCKRLDEDNSFFVDVFEDFDQFNNKYDLSSELGFIYLDVGLIRPDNRFLKNLFEEFLDkkFSLGRLIPESTTLFEFESEHEENPFLilDLNTRIEGKALNEIEQNVEFPIGSLGSRFNMSNNKLELDVVVLDLDIRSTNCLRSRGIDKIEDLLKLSDTELLRIDNLGRRSLKLIIDSISKL-------------------
266 UniRef50_B9PR73 DNA-directed RNA polymerase... 80 1e-13 1 26.5% 9:91 42:125 --------FKQIQPLFAHNSGCSAFFYFHTCFSSVAPVFLNALRRTSLSRLESLAISAVKIEGAKHEFYSLPGIREdvDDIFNNLGKIVFR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
267 UniRef50_A7AWB4 DNA-directed RNA polymerase... 77 8e-13 1 22.4% 13:119 11:125 ------------SIDIVSLTSTKMIFIL----LNADVATANSLRRIMLSEIPSLAIEVVTveYIAHRLGLLPIESSSARNFEYRDKCTCSDKCSRCTVEYSLDVKctRVVTHYDINLDS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
268 UniRef50_D2TEQ0 Putative DNA-directed RNA p... 77 9e-13 1 13.7% 31:241 16:228 ------------------------------FSSEVPHTMVNTIRRTLMLDLAELAPTDVTIHKNTSVycELLAHRIGLVPII------------SECTNISLQAVGPCTLYSDSIVCKDTGKPVtpGIMLFPIGT-GHEINFSCKLTKETGRKHARFVHCSSISMKkvGNTLLeaNFKPksFCSRCNCKKYSTGKDHDVHYVLSYKtnPTVHPITYTMRAIDVVYKKIGKLKEVASSRMEC----------------------------------------------------------------------------------------
269 UniRef50_Q8SL90 DNA-directed RNA polymerase... 75 3e-12 1 16.7% 5:225 1:200 ----MKLLNLKIMNKKRLKDQLYLLVILenLIKLELLSFSNLIRRILLKEIYNFKVSTikFCYKIHEFTKVEEVKNNLVSFLILLKEIKFRSYYkkRTFALLKIKQFTQVFLTDIILPNNFKILSIDNNLIKLNSLDINLKVLLELHKSKGY-----------------------NFNPVKKVNYIEEN----------NVYFEIYTNQTSTPLEVLVKSLKIIK--------------------------------------------------------------------------------------------------------
270 UniRef50_A6C7Z0 Serine/threonine protein ki... 74 5e-12 1 20.0% 214:328 769:886 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQRFDNAEEMLRAWRNCFEGIDEPGALSDHADETRLQELleTQIPELGLGSRSANALDRANILTVEDLLTVPMRRLMRLRGVGNKTRREITSAVKILRDRLG--KPDRDPSSLSD-
271 UniRef50_A8PVP1 Putative uncharacterized pr... 73 1e-11 1 17.3% 77:232 7:201 ----------------------------------------------------------------------------DQNTVVFNLKADCWKNGNSKDAT----VEG-RYVYSSQLEWDPKgrPVNQDIVIAKLA-PGQGMEMELHCEKGIGKDHAKFSPVATATYRLLPLIEidARKDTVTRerYPEFEGYVRLGRIQDHFLFSVESTGVYEPEDLLPASIEVLRKKIALLK-------------------------------------------------------------------------------------------------
272 UniRef50_A3ZU45 Probable DNA-directed RNA p... 73 1e-11 1 29.1% 234:312 1:79 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTRIPLNAAAQESESLMSKLEMSTAEIGLTVRTTNCLEERGIFTVRDLLNCTRADLLSISNFGEKTLDEVYSSLESIGF-----------------
273 UniRef50_C8W807 DNA-directed RNA polymerase... 72 4e-11 1 31.9% 257:325 1333:1401 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FDDLGVSQRWTNKFSEVGIETVGDLIGKTEEDLLRIDGIGAKAIEELRDGLEARNLLYILEPEEDEADS----
274 UniRef50_Q6VAG4 Putative uncharacterized pr... 71 4e-11 1 31.7% 263:322 20:79 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLRIQQVCRGFNIKTIRDLCKWPGRDLVRLRGIGGKSIDEIEDVLKKYNLRLGMFNEELD-------
275 UniRef50_Q14PS2 Putative uncharacterized pr... 71 5e-11 1 34.9% 232:314 27:109 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NEIQEQITIWLEMDETERNQLLNHSIDDLEITQRTQICLEKAKIYRLSDLVSKTENEIKNIKNLGEKSLTEIKEKMHELGLHF---------------
276 UniRef50_P34778 DNA-directed RNA polymerase... 69 2e-10 1 16.8% 5:224 1:215 ----MKYIKIYILRNKKFKNQNINFLKIKPFNCPNYNFFGNEIRRSLLLNIktMTITNIkiFHPVNEFFDIEEIKENLSNICINLKKLRFKFNPKNNKeiILNSFNKKSFSAKDIIIpsNLKIVNLKEHLFNKISQKINLKVLIKIENNENY-----------------------FYNPIKRINFILEKN----NNIGKYIILDLNSDININPFKAFIESLKYL---------------------------------------------------------------------------------------------------------
277 UniRef50_Q8SL92 DNA-directed RNA polymerase... 69 2e-10 1 16.6% 1:223 1:208 MKLVHILFVK----KKSNLNSFTTVFEIS-LNTKYKNLfgNIFRQFLLGSFEGLVINEKRFyyLVNEFSLLEEVLEPFYDVWTVFDNLRFKEKfsKRYYARLLTYGSGEINSKDIIVPSNLSLL-ENKSLFTLITDSLCIDVILQILSKNG-----------------------SPFNGVERVNYILENSNSG-NINYNKLYLDISTRYFLSPMEALFECFRK----------------------------------------------------------------------------------------------------------
278 UniRef50_B1G5N0 RNA polymerase alpha subuni... 69 3e-10 1 36.9% 256:320 13:77 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLDLLDLNFRVTNRLASAGIFRVGDLCVCSASDLLKMPGFGVKSLQEVERSLQRAGRSLRKEDPQ---------
279 UniRef50_A4E9H2 DNA-directed RNA polymerase... 68 4e-10 1 26.4% 257:328 1223:1296 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FDDLGVSQRWTNKFSEVGIETVGDLVGKSEEDLLRIDGIGAKAIEELRDGLEAHDLLYILENNDddEEDLSQ-
280 UniRef50_C0JWW4 Alpha subunit of RNA polyme... 67 9e-10 1 17.0% 1:135 31:200 IKKAMTQHFscQKLTLHPKNEFQGTISFSDVPSHQPIRFSNFLRRVLISETptTSIDFVYSNfsLGELGYISGI--DLQDLTTQINQLPLVFTEQQEklIRLCVQGPGQIRAAHLHFPKGVYCLTPNVVLAEISD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
281 UniRef50_A7M3S5 Putative uncharacterized pr... 65 3e-09 1 23.9% 227:318 140:231 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YINSVQRVKEGLEIALDNIQAEEVHYLSQPIFSMKMTPIVRSKLESHGILYVGDLIQLNEEYLMEIWGLGPVALERIKTKLNENGVWFGMDV-----------
282 UniRef50_D1VQ00 Putative uncharacterized pr... 64 5e-09 1 23.1% 199:328 23:148 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRAGDEVTLYGLVRAREVLVLGQSQFADQVREVLRAGQVPGWGLHELPAERAPVSALYAL---LSVRTANILKRAPFLFAQEVAALPDEVLREFRGLGPRVLAEIRAALADPALA-NFRIDLASPESDAS-
283 UniRef50_A6TQ35 RNA polymerase, alpha subun... 64 7e-09 1 28.2% 248:325 1:79 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MHSHNYSDSISTLNLSTRSYNTLRREGIHTTNDLLNCSKDDIINFRSVGVKSLEEIVNAIDSLnyKLEMYSENMLNKK----
284 UniRef50_B4CX76 RNA polymerase alpha subuni... 62 3e-08 1 35.5% 253:314 77:138 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHTPIRDLPLPTRIANGLRRMGVRTLGELTALHAEDILLSPNLGERSLDQLRHVLGLIGRSL---------------
285 UniRef50_A3VLF1 RNA polymerase sigma factor... 61 5e-08 1 40.0% 270:324 1:55 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAKEGIVLVGSFVQLTAGDILRKQGLGKKSYREARATLEALGLSLGMELCGWDEE-----
286 UniRef50_Q8SL94 DNA-directed RNA polymerase... 61 6e-08 1 17.0% 5:151 1:157 ----MKLLKISILRQSTFKNKKYNLFKIKTNRDFNPLVIGTKIRRNLIKETKGTKITQakLYHSLNEFTNIEEISEKTNEIIKNLERLKIKLVNKNLKKKIICIttKENSFFKEIY--KTIKISNLNQKICTIKSHNVEIKLLLKIEKEKG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
287 UniRef50_D1H4E8 Whole genome shotgun sequen... 60 7e-08 1 22.9% 10:57 16:63 ---------KCVESRVNNKRLCYGRFILSPFIIGQADTIGIVMRRTLFGEIEGTCIT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
288 UniRef50_UPI000197BA3F hypothetical protein BACCOP... 60 1e-07 1 28.6% 261:323 18:80 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYGVRVQRIFQTNGIFTVRDLCSQSKQELRHTRYLSKKSISMIEKILGKYALRLGMTNNELDE------
289 UniRef50_C5T6I0 Putative uncharacterized pr... 60 1e-07 1 32.1% 245:322 133:211 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEALLDPILFRPISEieLTDPVIALLVAAGVHRLGDLVQMSPTALMRIRGFDVLAMERIEEGLTIFGLKVGMALPGWS-------
290 UniRef50_D1CF08 RNA polymerase sigma factor... 59 2e-07 1 23.5% 248:328 153:227 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKSHEVDNSLENLQLSPRIRGILRRAGIFTADQLYRLTDEELLKLKGIGKAALEEIKA------VKLGDADNKRSIEEEKQ-
291 UniRef50_A8H4Z2 RNA polymerase sigma factor... 59 2e-07 1 23.1% 252:329 280:357 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLEKPLEELNLPVRLFNVFNVNGFTSLNDLKDITDKTMLSWPNFGRKSARDLYSLLLEIISRKQSKLDAFLNSDASQN
292 UniRef50_UPI000197BA40 hypothetical protein BACCOP... 59 2e-07 1 38.2% 266:320 23:77 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRKALMQAGIVTVEDLCRKTEEELSSIPFIKGKNLQAIKDMLAEKGLHTGMSQEE---------
293 UniRef50_B0SH17 Transcription elongation fa... 59 2e-07 1 18.7% 187:309 333:458 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------INGSNVKLVSQLSGFKIDIKTVSQYNQELASPEAREKLDRLFNAQQEAMEESEDGYNQSGQDEEEEDSGFTPlpGLTPRIVGLLEAGGIKNVETLLEFSQEELSKISGIGKTTAEQILRLLRE--------------------
294 UniRef50_C1EL51 Conserved domain protein n=... 59 2e-07 1 29.6% 262:315 42:95 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSAPARRALEHHGIHNVEELSKYSEKEILKLHGMGPASLPKLRKALEESGLSFK--------------
295 UniRef50_UPI000197AD37 hypothetical protein BACCOP... 59 3e-07 1 23.5% 221:318 132:229 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRDMANYVDSIKSIKTGLEIAVNNIDAEEIPFLSRAITDLGITPSARERLAKEGILYVGELIHLNEDYLMDIWGVGPVTIDRIKNKLNENSVWFGMDV-----------
296 UniRef50_A3ZPK6 DNA-directed RNA polymerase... 59 3e-07 1 25.7% 217:317 25:118 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAAADDILARCLAEVKSQRRELCDEYALPRE-------VPLARLNLEPQILNALEYCEINTVGDLQGVTYEDLLSVPNLGQSRASEVRDSVRQLLRDFKTR------------
297 UniRef50_A6C6A3 Putative uncharacterized pr... 58 4e-07 1 34.4% 262:322 1:57 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSVRTVNYLKEHKVHTIGDLVKLKQEDLLSIPNFGEQTLQECIDLFD----RLKVPNPGWE-------
298 UniRef50_D1C976 Helix-hairpin-helix motif p... 58 5e-07 1 27.1% 262:320 14:72 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAQPARRALLGAGYTRLEDLTRVTEDQLLQLHGIGPKALAQLREALAARGLAFAADTDD---------
299 UniRef50_B1INQ5 Dna-directed rna polymerase... 57 8e-07 1 21.5% 249:313 1:65 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRKNKRDELRELNLSIRAYNSLRNMGINTLEDLSMYSKKQLYQFKGIGIVSLRKIEKGLDKKNMK----------------
300 UniRef50_C5SIY2 Putative uncharacterized pr... 57 1e-06 1 33.9% 249:310 1:74 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKDKLDAPIEVLKLCRRTYCALKRRevLTVRQAVQLTDRDLRNMPNLGRVSIKELKDKLAAF-------------------
301 UniRef50_C6J496 Putative uncharacterized pr... 56 2e-06 1 25.9% 261:314 9:62 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLSAPARRALEANGVTTLEKLAELSEQEVLRFHGMGPASIPKLKEALRSKGLTF---------------
302 UniRef50_B2J0X0 RNA polymerase, alpha subun... 56 2e-06 1 23.6% 226:314 158:246 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NQLVEVANSNVHPVEEINGDNKPNGVVDENSIESLNLKRNTYTALKDAKVNTIEDLNKYGVTGLRTLKNLGNKSVSQIVEALLFRGIEL---------------
303 UniRef50_Q2SGK7 Serine/threonine protein ki... 56 2e-06 1 16.7% 217:324 741:845 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FATAADMLRAWRQVFLQASKESRHpeVPTCPVEEAQQDTQIGLLELSPQALDALSRRNLNTVADLLKQNRSKVRAWPGVGIKTRNEVSELIRKL-------QEKWPNE-----
304 UniRef50_A0JVH2 Putative uncharacterized pr... 55 2e-06 1 20.4% 261:314 16:69 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIGAPARRAMAHAGLETLEQVVQFGQRELLKLHGMGVKTMAQLEDAMDEHGLEF---------------
305 UniRef50_A9F5X1 Protein kinase n=1 Tax=Sora... 55 4e-06 1 18.7% 220:310 756:851 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEQMRTEWIACFAAAPSEAGADEADGAPPVAADLSipVEALPLGAREKNALDRSGIVTVRELLALPQNQLSAIRGVGRETARAIQDFVERW-------------------
306 UniRef50_Q49ZY1 Putative uncharacterized pr... 54 6e-06 1 15.6% 255:318 1:64 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTIDLPKIGKPATNALHHIGVKTLEDIAGYDRTTLLAIHGVGPKAMDILEDNLKKHNMNFKEDI-----------
307 UniRef50_C6Z4I8 Putative uncharacterized pr... 54 6e-06 1 22.9% 243:312 138:211 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QDIPSECVDLLVTPLGNLDINFRVLRALRKYNIYQLEDLLRFIkdALCRIPGMGMKSVEQLYHTLKERNI-----------------
308 UniRef50_A8SD09 Putative uncharacterized pr... 54 8e-06 1 31.9% 257:303 6:52 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LASTNLSTRAINILARNNILTLSQLKECSEKELRSMRGLGGKTLDEI--------------------------
309 UniRef50_C1F696 Transcription termination f... 54 1e-05 1 16.7% 221:328 331:436 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAKLLGWKIDIKSEEEKRQEVEQQMGGFatATAIEEVKELGES--IIQKLVAAGITTVESLADMTPEQLEEIPGIGEKTLEKISTAVRHY---FGQYEPGEERPAVPE-
310 UniRef50_UPI00016C679A hypothetical protein CdifQC... 53 2e-05 1 35.2% 257:310 1:54 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNQLKLSKKIVNHLIKANIDSIESLKTMTSNDLLKINGIGPKSLEEIKQALSLL-------------------
311 UniRef50_B0SFJ1 Putative uncharacterized pr... 53 2e-05 1 24.1% 262:315 12:66 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGAPAQRALFHegITKLEDLSRYSKQDLLRLHGFGPSSLPKLESELRKLGIQLK--------------
312 UniRef50_C7RJ33 Serine/threonine protein ki... 52 3e-05 1 18.7% 214:304 765:854 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RERFDNAEDMLRDWRKIFDQADTQTAADPFEVIA-LRATRETAIGELDYSVEAQNVLDRMGIHSVRELLAVDRVRFRYLKSVGDKVRKEIR-------------------------
313 UniRef50_D0TJA1 Predicted protein n=1 Tax=B... 51 4e-05 1 21.4% 229:312 91:179 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEISPNIYLPHELPLIITDDIMNVLSLsvSDFDLDTRTINMLRKMEIYTLEDLLRYTKDklLKYRGFGAHSLALLKESLIKKGV-----------------
314 UniRef50_Q01V32 RNA polymerase, alpha subun... 51 5e-05 1 21.3% 239:313 6:78 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHPAVPDGDPKIVSLESAVEDLGLSVRTRNALRAIGCDTVENVLAL---DlsSVRGLGRKTKEELLVALELKGFR----------------
315 UniRef50_D2S452 Putative uncharacterized pr... 49 2e-04 1 29.1% 255:309 12:66 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETVSDLGLPTRAVTALARAGITTTAQLAALTRAELVAVNGLGPGSIAAIRRVVPE--------------------
316 UniRef50_D0LS71 Serine/threonine protein ki... 47 7e-04 1 23.8% 248:310 861:925 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PELEGDERPIDELglKPKARQGLARMGVGSVGELAMLDRTTLRSVPGLGPKQSDEIVRALERL-------------------
317 UniRef50_Q39216 RNA polymerase subunit n=11... 104 3e-21 1 16.3% 5:231 74:380 ----LENFSEDFKVDVISLTETDMVFDMIGVHAG----IANAFRRILLAELPSMAIEKVYVANNTSVIQD-EVLAHRLGLIPIAADPRLFEynEKNTIVFKLHVKcrRKVLTSELKWLPniRPTLKDILIAKL-GPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLKEFEgcSLCRECIreDQVDLRRVKNHFIFTIESTGSQPPEVLFNEAVKILEDKCERV--------------------------------------------------------------------------------------------------
318 UniRef50_A4S0F8 Predicted protein n=2 Tax=O... 104 5e-21 1 17.1% 4:231 41:356 ---SAERFRETFALTLTTSDEERCVFELE----GCSPAFANAFRRIILSEVPTMAIEKVFVVNNTSVvdEVFAHRLGLVPIKADPAMFEYRGEGdnTIVLKMHVRCHKevYSNALTwdQELGCVHDDILLVKLA-PGQEVELECHCVKGIGQEHAKWSPVGTCWYKMVPEITicANFSETHkcDFCVErdKIAVRKRKDHFIFTIETIGQMAPGTIFKEAVKILASKAQNV--------------------------------------------------------------------------------------------------
319 UniRef50_C1E0F4 Predicted protein n=2 Tax=M... 95 3e-18 1 14.9% 4:231 44:390 ---SMQSFRENFKMEITHMDAERVVFEMQ----GISPAIANAFRRILIAEVPTMAIEKVYMVNNTSVidEVFAHRLGLIPIRAdyKAEGETYNERNTIVFKMNvkGPLmvYTNELVWLpeIATVHDDILLCKMVA-GQEIELEAHCVKGQGKEHAKWSPVGTTWYRMVpfMKECNDFDPSHncDYCLERVrvRVLKSKSHFIFTVETAGQLPPDVLFKEAVKVLASKCQSV--------------------------------------------------------------------------------------------------
320 UniRef50_B5Y3D1 Predicted protein (Fragment... 91 5e-17 1 16.7% 34:243 18:317 ---------------------------------HVDTSFVNALRRILLAEVPTVALENIYMWENSSLidEVLSHRLGLIPLKIDARLLDEQDDDdnTVVFRLGVSctKHVYSKDLVWVpdICAMHDDILIAKL-RPGQSIELEVHGRVGVGKDHAKFSPVATASYRLMpiVPTDavCNpcTMsnYMRHTElvRMSRIPDHFIFSVESVGMYAPGVLVAEALRILQRKCRKVMDYADEANLKQD--------------------------------------------------------------------------------------
321 UniRef50_B8CCH8 Dna-directed RNA polymerase... 91 5e-17 1 13.3% 4:228 36:351 ---FLSRIRQNFSLRVLErsKNELVFEV----VGVDVSFANALRRIMIAEIPTMALEHVYMWNNSSLIHD-EVLSHRLGLVPLNVDPRLFdaTDRNTIVFRLNEATskHIYTRDLLWAPqiRPISEDILLAKL-RPGQVIELEAHARKGVGKDHAKFSPVATASYRLMPHIEIvsNPYACTMsnYMRNPTLKESIKMsnHFIFSVESVGMMEPAVIVSEALKVLKEKC-----------------------------------------------------------------------------------------------------
322 UniRef50_A2ER03 RNA polymerase Rpb3/Rpb11 d... 84 5e-15 1 13.4% 3:233 27:333 --QSKIEIISYEQ--LAETGEDRLVFDL----TNAPASHANALRRTLLASVPSIAIELVGmdNTGVMPDEVLCHRLGLIPilLDYPKQKIEDKSSDPNEVLlsIENPGEILSSHLVWMpnVAPLHADIPITKIL-PGQTIHLYCRAIKGIGSDHAKFQPVCTAFYRLVPSIQVKdsPRKCTTCRECIRNPsvSLGKEANHYEFTVESVGVRPAYVLVKEALQILQNRCDEFTE------------------------------------------------------------------------------------------------
323 UniRef50_A4HA24 DNA-directed RNA polymerase... 83 1e-14 1 15.6% 34:251 129:445 ---------------------------------HVSPPISNLFRRVLMTEVPTLAFDRVLIEENDsvLDELLSHRLGLIPviTESNQASfnLDPSRILLFELDAMGAKdvYSHQLQwdDAVFLVHPDILLTKL-GPGQRIKLKAIAVKGFGAVHAKWCPVSACYycPAGVFGYeeKCTLCREcaAASEGDRVRVQKDKTHVIFHIESVGQLHPAQILRFGLRLFAERCRALAEIVQSTEVHVVDASAKLLE------------------------------------------------------------------------------
324 UniRef50_Q9UAY9 Putative uncharacterized pr... 81 4e-14 1 13.4% 5:236 47:362 ----INEYCDQIQVAMVNESDdtLEFDITRIEAP----IANALRRVLIAEVPTMALEKIYLYQNTSVidEVLCHRLGLLPLRVDPRGFQfeGDPAKNLIFKINVSCTKnvYSRAFEWVphPRMVSDDILVAKL-RPGQEIEASCHAVKGIGRDHAKFSPVATASYRLLPTIRldARKDTCSRNVFRHEDLsvQLGKNKQHFIFSVESTGALKSSELVVEACKVMEIKCRSLRKQIE---------------------------------------------------------------------------------------------
325 UniRef50_A8P6Y5 RNA polymerase Rpb3/Rpb11 d... 75 3e-12 1 17.0% 13:241 52:337 ------------EIKIFIVNESKDGMTLEFDLVGVEAPIANAIRRILIAELPTLAIEKVYLYQnsHRFGLLPIKAdrLFKMPLTrrNLIFEIKVNCSrnALKTATNPKEIYENAFVYSNSFKW----IPI-----GDQSTSLPCHCLKGLGRDHAKFSPVATASYRLLPQIVLKKKFSgcSRnrYEDLAEYIELSRIKDHFIFSVESTGALRSAELVVEACKVMEEKCRTLQSLFQKRLKE----------------------------------------------------------------------------------------
326 UniRef50_C4PY29 DNA-directed RNA polymerase... 70 1e-10 1 18.2% 4:173 28:242 ---SLSVFKKKFHVEIIRHGedTMEFDM----INLDCSFANAVRRILVSEVPSLAIERVYVSQNthRLGLIPlaSDDLSGfvYDL-CVGFTHSSKDskDDTLPVAQYLPVYSSDLKWIphFNINNPPIplINKLALGDEIEARCVAVKGIGRDHAKFSPVAAAYYKFHPIIKL------------------------------------------------------------------------------------------------------------------------------------------------------------
327 UniRef50_Q5JTD9 Polymerase (RNA) I polypept... 68 6e-10 1 18.2% 72:236 3:163 -----------------------------------------------------------------------EGTEIDTLQFRLQVRCTRNPhdSSDPNELYVNHkyTRHMtqADLFPEGTIRPVHDDILIAQL-RPGQEIDLLMHCVKGIGKKVAR-----------VANPRLDTFSREIFRNEKLKKVVRLARV--RDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELD---------------------------------------------------------------------------------------------
328 UniRef50_B3T3X4 Putative RNA polymerase Rpb... 66 2e-09 1 17.1% 12:228 2:318 -----------VKMEIINESEE----KISILLKETDRAFVNALRRSLMSDTPKMAIETVRFQMGthRndEMIAQRLAMVPIPTNHEEYHfrGCMTCNMIYTCTAYGSKevTAGDMIFLGAQSLEIPEHyiiTKLYKGQMLEFIAIAVMGVGSEHAKWSPVcrDFDKKGRLEDIDRVKTLITEleEKVekDAITIEEIPGEFIFSFETDGSMAPQTALKKAAASLSMSF-----------------------------------------------------------------------------------------------------
329 UniRef50_Q3LWA1 DNA-directed RNA polymerase... 63 2e-08 1 15.1% 9:167 16:213 --------KKPWEIHIVEEGFQFKVLVLNNFfvGLDSSIINAMRRILLSEIATIAIEDIYVFENTSIldNILAHRIGLIPLRINPKQIQFqkDQTNSVVLILKNSntKDIFCKDfiVKKNSFLTFEDILITKL-KPKQLLFLEAHCKKGYSTQHSKYSPVAAAWYLY------------------------------------------------------------------------------------------------------------------------------------------------------------------
330 UniRef50_Q98S79 DNA-directed RNA polymerase... 63 2e-08 1 10.9% 7:227 45:319 ------DLKYSLELNYKKKSLNDCKINL----KGISSLIINSIRRTIMADVKTLSIEKVYIYKNSTVfdEIISHRLGLVPIFinRAKNDPNIIINLDINNNIYNKTKISIFSedLYKNQLIFPVYRDILILKI-NPGQEIHCECHCLINSGLNHAKFSPVGTIFYRMEPYVKicTFCKECIKMNFKSKCI-IKIGRNKIKINLIIESTGVSSPENLFKRAIDLLIGK------------------------------------------------------------------------------------------------------
331 UniRef50_Q8IP63 RNA polymerase II 33kD subu... 60 1e-07 1 23.2% 11:92 6:82 ----------QPSVQITELTDDNVKFVLEDTE----LSVANSLRRVFIAETPTLAIDWVQLEANSTVLSD-EFLAHRIGLIPLISDDVVERL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
332 UniRef50_C8TDY9 Rna polymerase ii b3 subuni... 59 2e-07 1 17.3% 14:88 44:113 -------------IRVTELSNKVVRFTLSNC----DASIANALRRVMISEVPTLAIDLVTVFENTSVLHD-EYIVHRLGLLPIDSSNV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
333 UniRef50_A5N5E6 Putative uncharacterized pr... 50 1e-04 1 17.0% 220:325 34:139 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIISIIRKYEELEAYSNEMENLKANNKMNEETELYDLCKLLKFHTHSINALIHKNIRSVDKLLSLSQEEFYAIKNLGKVSQKYIKECISEYKEKIKQHSNTNDNSN----
334 UniRef50_D1SHQ1 Putative uncharacterized pr... 50 1e-04 1 22.2% 261:314 10:63 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KISAPATRALTAAGYTTLRQLAGVPRAELARLHGMGPKALGVIEAALDEHDLRL---------------
335 UniRef50_Q2YZ95 Probable DNA-binding protei... 49 2e-04 1 15.9% 261:323 5:67 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIGKPATRALNSQGIYTLEAVSQYTKSSLMEMHGVGPKAISILEQALFQHQLHFKTEVHSSLP------
336 UniRef50_C1YNS0 Putative uncharacterized pr... 48 5e-04 1 23.1% 262:313 125:176 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGAPATRALAGAGLTTLEQVAALTGAELGALHGVGPKAVRILREALAERGLS----------------
337 UniRef50_B1YES5 Putative uncharacterized pr... 47 0.001 1 25.5% 260:314 11:65 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLAKPAQRALSEHGVTTLQMLETYREDELLQWHGIGPSSIPKLRQLLAEQGLTF---------------
338 UniRef50_C1A6H8 Putative uncharacterized pr... 45 0.003 1 19.3% 261:317 20:76 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLSGPALRALSTAGITSMAQLAQHSKADLAAMHGMGPKGMRMLEEELKRSGQTLRQE------------
339 UniRef50_Q3LWA0 DNA-directed RNA polymerase... 45 0.003 1 12.4% 36:172 25:186 -----------------------------------DTSFTHAIKNIVENSIITLAADTIMieFIAHRIGLIPLISNTLYeiVFDINKFC-KNNSSCFvtFRNRVTPIGYSYYDKINQENKFNLVNYSHILILKLKQSQVLSMKITLKKGKGSDHTKWCSNYGNILFPIPTIR-------------------------------------------------------------------------------------------------------------------------------------------------------------
340 UniRef50_B4U4E8 Putative uncharacterized pr... 45 0.003 1 17.8% 189:317 197:322 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDFVAIVRQKAFPIDDILAAGALESYEPNSLSSIYLAfnILPLLMTAQYYLQHYVQEFFEGAEGELTFLEELDLPLSKVNLFNQYGIHTLEDFSAWTTQELLDIPGVGK----QMIARLKRLGVIFSQE------------
341 UniRef50_C1ASS1 Putative uncharacterized pr... 45 0.004 1 30.6% 266:314 20:68 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRRELASHGYTRFDQLTMVTAKELLKIHGVGPKAIRILEEELAKRGLGF---------------
342 UniRef50_B9MGY5 RNA polymerase sigma factor... 45 0.004 1 18.4% 149:300 119:272 ----------------------------------------------------------------------------------------------------------------------------------------------------GYGYEIADPSHPSVKDLQSvpALRTLGDFEPRGWVEQFLEAQPQFEQTLRSA---DIWDDESYIANEHVLDTSniGIARYTLIAGEKPSASGILNNLHACPPWFLNDKLQNLNTTVRMANVFKGHNLSTVAHIAAKGYNGLLKLPNLGQGSV-----------------------------
343 UniRef50_A4QAA9 Putative uncharacterized pr... 45 0.005 1 18.2% 261:326 10:75 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVTISARKALSTAGFKDLESLAGTNYEEVAGLSGIGARTLERLQAALMERGLSFGGEVPEAEQRTA---
344 UniRef50_Q1IYE6 Predicted DNA-binding prote... 44 0.007 1 18.3% 255:314 1:60 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MMTELPKLGTPARHALSELGITCLEDLTRFSRAQIGNLHGVGPRTMSLLQAALSARGLSF---------------
345 UniRef50_D1R556 Putative uncharacterized pr... 44 0.007 1 24.1% 253:310 134:191 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDEPIHILGLSQHAEKCLEKNGKCLIQDLLKADTQDLIFLKGMGQGHIDEIQQTLKKY-------------------
346 UniRef50_D1BF73 Putative uncharacterized pr... 44 0.007 1 24.5% 266:314 21:69 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARRELAVHGITTYEQLAARSTRELLGIHGVGPKAVRILAEELDGLGLAF---------------
347 UniRef50_A1VV89 Serine/threonine protein ki... 44 0.011 1 14.4% 214:310 754:851 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KERFDNAEDMLRAWRAIFAARQTVHPPQAEGFSAilTALSTTTMAELGYTLEAQDVLERMGVHNARELLAVDRIRFRYLKGVGDRIRKEIRLTAKEL-------------------
348 UniRef50_A4BLY7 Protein kinase domain prote... 43 0.012 1 20.8% 257:328 685:755 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LARLGLSARLLNAAERIGATTVGELLDLPGMRMYRNRGIGqrRLRELREQLAR---HLGSPVPG-PMDDAPD-
349 UniRef50_Q3AM50 Putative uncharacterized pr... 43 0.013 1 14.9% 217:317 165:266 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VMEALDHLQDFSRQSQSHQRVWERYTDLFPEFPMHYFAEQlfNIGGSKKHARCLIDAGYTSPQKVRDASDAELLQVKGIGSITVKRIRERLANPGERFDMD------------
350 UniRef50_C4KZA2 Putative uncharacterized pr... 43 0.013 1 22.4% 262:319 7:64 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAAPAKRALVAKEIESLHDLCPYTRREVASWHGIGPNALFVLEAELLKYNLAFKMEEP----------
351 UniRef50_C6CYZ1 Putative uncharacterized pr... 43 0.014 1 18.5% 261:314 10:63 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLSKPAMRAFTHAGYLKLEQFAGLTEAEVLALHGVGPTAIVLLRQALAEKGLAF---------------
352 UniRef50_A5ZLL3 Putative uncharacterized pr... 42 0.021 1 21.6% 216:312 111:205 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVLHRNNVVCGQFKVFVPLKEYDIP------AECVDKLSTPLEYLEIQPRILRNLRRYNIYLLEDLLRFIKKnlGKLHGVGKRSCEDLYLILKDKDI-----------------
353 UniRef50_D1VE21 Serine/threonine protein ki... 42 0.029 1 18.5% 234:314 870:950 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MADEETARRARDAAAAAATSDTPLDAAGLSPRAVSAAHRLNATTVGDLLTLGSKEIISLPGTGAKTRQELQSRIRQWRRSL---------------
354 UniRef50_B6YXM0 DNA helicase n=5 Tax=Thermo... 42 0.031 1 15.3% 186:329 568:713 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVKTAKILLDWINEVPETRIYDTYNIDPGDliLELADWLMYSLIELYKLFEPKKDVLDYLRDLHLRLKHGVREELLELVRLPnaLYNAGFRTTEDIMRAKVSELLAVEGIGLKVVE-------GLFMHFGVELPKASKKSTEEN
355 UniRef50_C7CV87 Predicted protein n=19 Tax=... 42 0.032 1 26.1% 261:306 12:57 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLSKPAVRALTNEKIDSVDELYARGRKALLSLHGFGPKSIRTIEEM-----------------------
356 UniRef50_Q5JGV6 Endonuclease PI-PkoHel n=2 ... 42 0.034 1 19.0% 187:307 972:1101 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKTAKVLLDWINEVPEARIYETYNIDPGDliLELADWLMYSLIELYKLFEPKEDVLQYLRDLhrEELLELVKLPNIGRRRARALYNAGFRSVEDILRAKPKDLLQVEGIGLKIIEGIYRHL----------------------
357 UniRef50_B8D4L1 DEAD/DEAH box helicase doma... 42 0.037 1 16.4% 194:315 588:717 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YDWINEVSEDEIVSRYMIGPGDliIHALARVEAVLGDIRFHKALDTLSRRIEEGVKEDALELITLRLIGRVRAR-ILIQHGIKSLRDLAETPLSKIASLPKFGPRIAEEIDRQLRDLGYRIN--------------
358 UniRef50_B6FKF7 Putative uncharacterized pr... 41 0.045 1 21.2% 258:309 9:60 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDIEMSSRLRNVLRRNGFESLEGVREYPKEYFIKFRNMGQATLQELYQICEE--------------------
359 UniRef50_D1C4N8 Putative uncharacterized pr... 41 0.062 1 23.2% 253:308 92:147 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQPPIEELDLSPRVLRLLHRYGLHTIAAVERVDEATLMLLPNFDARARHEVLRAIS---------------------
360 UniRef50_A7M2S1 Putative uncharacterized pr... 41 0.065 1 20.0% 238:312 194:273 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEIFIPEDIKAAKALLDTPITELKFDIRSQRIISEADIKTLRELLQITSqkLRdlRNFGLVSQKKVEKRLKELNV-----------------
361 UniRef50_B7A968 Putative uncharacterized pr... 40 0.086 1 20.0% 269:308 41:80 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALLAAGYTTLESLRGLSEADLIAIRGIGPRLAKQILQALE---------------------
consensus/100% .........................................................................................................................................................................................................................................................................................................................................
consensus/90% ....................................................................................................................................................................................................................................................................................................................................
consensus/80% .............................................................................................................................................................................................................................................................................................................................
consensus/70% ...............t.....h.h.....t...shssshRRhhhtph.shsh..h.h....p.h.....h..th..h.hp.p.........t...h.h.h.t...lhstph.....h..h..t..lhph......h.h.h.h..s.sh...p..........................................t.h.h.h.s.h.h.s..hh..u.t.h.t.h..h.....................................................................................
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