BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (193 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Ta... 343 2e-93 UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax... 337 2e-91 UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax... 283 2e-75 UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax... 276 3e-73 UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A su... 229 5e-59 UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase,... 218 7e-56 UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A su... 209 3e-53 UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subun... 208 7e-53 UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clos... 195 8e-49 UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A su... 189 3e-47 UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A su... 188 8e-47 UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A su... 186 5e-46 UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bac... 182 5e-45 UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 181 1e-44 UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidor... 172 4e-42 UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A su... 167 2e-40 UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=... 167 2e-40 UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 160 2e-38 UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desu... 157 2e-37 UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subun... 154 1e-36 UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E su... 153 2e-36 UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subu... 151 1e-35 UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subun... 148 1e-34 UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subun... 138 1e-31 UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Ta... 137 2e-31 UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subun... 136 4e-31 UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase ... 135 5e-31 UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subun... 125 1e-27 UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Begg... 102 8e-21 UniRef50_D1NHP2 Electron transport complex protein rnfA n=1 Tax=... 100 2e-20 UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 T... 96 1e-18 UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E su... 88 1e-16 UniRef50_Q4K757 Membrane protein, putative n=2 Tax=Pseudomonas f... 87 4e-16 UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone redu... 80 2e-14 UniRef50_Q0VP36 Electron transport complex protein rnfE, putativ... 78 1e-13 UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=... 78 2e-13 UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacte... 77 2e-13 UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E su... 77 3e-13 UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=... 76 5e-13 UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax... 76 8e-13 UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteo... 75 1e-12 UniRef50_B6G8I2 Putative uncharacterized protein n=2 Tax=Collins... 75 1e-12 UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E su... 75 2e-12 UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E su... 72 7e-12 UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-lik... 71 2e-11 UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E su... 71 2e-11 UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE typ... 71 2e-11 UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 70 3e-11 UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax... 70 3e-11 UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bactero... 70 3e-11 UniRef50_B0P6D2 Putative uncharacterized protein n=1 Tax=Anaerot... 70 3e-11 UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D su... 69 8e-11 UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachy... 69 1e-10 UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=... 69 1e-10 UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=... 68 1e-10 UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E su... 68 2e-10 UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 68 2e-10 UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E su... 67 3e-10 UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E su... 67 4e-10 UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subun... 67 4e-10 UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E su... 66 6e-10 UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=... 65 9e-10 UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E su... 65 1e-09 UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E su... 65 1e-09 UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E su... 64 2e-09 UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E su... 64 2e-09 UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E su... 64 2e-09 UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax... 64 4e-09 UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4... 63 4e-09 UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E su... 63 5e-09 UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaprote... 63 6e-09 UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E su... 62 8e-09 UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase ... 61 2e-08 UniRef50_A5VZI7 NADH:ubiquinone oxidoreductase subunit RnfA-like... 60 3e-08 UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3... 58 2e-07 UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:qui... 57 4e-07 UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E su... 57 4e-07 UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Ta... 56 6e-07 UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desu... 52 1e-05 UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subun... 52 1e-05 UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subun... 51 2e-05 UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subun... 51 2e-05 UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 49 9e-05 UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostri... 49 9e-05 UniRef50_D1PJN2 Putative uncharacterized protein n=1 Tax=Subdoli... 49 1e-04 UniRef50_A8S6D2 Putative uncharacterized protein n=2 Tax=Faecali... 48 2e-04 UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subun... 46 7e-04 UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 45 9e-04 UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subun... 44 0.003 >UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Tax=Bacteria RepID=RNFA_YERP3 Length = 193 Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 170/192 (88%), Positives = 187/192 (97%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETA+GMGLATTFV+TLAS+CAW+++ Sbjct: 1 MTEYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAWMVN 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++IL+PL LIYLRTLAFILVIAVVVQFTE+VVRKTSP LYRLLGIFLPLITTNCAVLGVA Sbjct: 61 SFILLPLGLIYLRTLAFILVIAVVVQFTELVVRKTSPTLYRLLGIFLPLITTNCAVLGVA 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LLN+N HNF+QSA+YGFSAA GFSLVMVLFAAIRERLAVADVPAPFRG++IALITAGLM Sbjct: 121 LLNVNQSHNFMQSAVYGFSAAAGFSLVMVLFAAIRERLAVADVPAPFRGSSIALITAGLM 180 Query: 181 SLAFMGFSGLVK 192 SLAFMGF+GLVK Sbjct: 181 SLAFMGFTGLVK 192 >UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax=Gammaproteobacteria RepID=RNFA_SODGM Length = 193 Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 168/192 (87%), Positives = 184/192 (95%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M YL+LF+GTVLVNNFVLVKFLGLCPFMGVSKK+ETA+GMG+ATTFVMTLASICAWLI+ Sbjct: 1 MNGYLMLFIGTVLVNNFVLVKFLGLCPFMGVSKKVETALGMGMATTFVMTLASICAWLIN 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +IL+PLN+ YLRTLAFI +IAVVVQFTE+VVRKTSP LYRLLGIFLPLITTNCAVLGVA Sbjct: 61 DFILLPLNIPYLRTLAFIFIIAVVVQFTELVVRKTSPALYRLLGIFLPLITTNCAVLGVA 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LLN+N HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPF+G++IALITAGLM Sbjct: 121 LLNVNENHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFKGSSIALITAGLM 180 Query: 181 SLAFMGFSGLVK 192 SLAFMGF+GLVK Sbjct: 181 SLAFMGFTGLVK 192 >UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax=Bacteria RepID=RNFA_AZOVD Length = 194 Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 139/193 (72%), Positives = 172/193 (89%), Gaps = 1/193 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+ +L+ VG +LVNNFVLV+FLGLCPFMGVSK++ETA+G+ LATTFV+TLA++C++L+ Sbjct: 1 MTELVLILVGAILVNNFVLVQFLGLCPFMGVSKRIETAIGLALATTFVLTLAAMCSYLLQ 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L+PL+L YLRT+ FILVIAVVVQFTEM+V KTSP+LYR+LGIFLPLITTNC VLGVA Sbjct: 61 RYVLVPLDLEYLRTIGFILVIAVVVQFTEMLVNKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 121 LLNIN-LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGL 179 LLN N G+ FL+S + GF A +GFSLV+VLFAA+RER+A+ADVP PF+G AI LITAGL Sbjct: 121 LLNANKAGYGFLESGINGFGAGLGFSLVLVLFAAMRERIAIADVPKPFKGAAIGLITAGL 180 Query: 180 MSLAFMGFSGLVK 192 MSLAFMGFSGL+K Sbjct: 181 MSLAFMGFSGLIK 193 >UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax=Bacteria RepID=RNFA_PSEA8 Length = 194 Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 137/193 (70%), Positives = 168/193 (87%), Gaps = 1/193 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+ L+ V +LVNNFVLV+FLGLCPFMGVS+K+ETA+G+ LATTFV+TLA++C+ ++ Sbjct: 1 MTELALILVSAILVNNFVLVQFLGLCPFMGVSRKIETAIGLSLATTFVLTLAAMCSHILQ 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L PL+L YLRT+ FILVIAVVVQFTEM+V+KTSP+LYR+LGIFLPLITTNC VLGVA Sbjct: 61 RYVLRPLDLEYLRTIGFILVIAVVVQFTEMLVKKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 121 LLNINLG-HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGL 179 LLN N + FLQ+ GF A +GFSLV+VLFAA+RER+A+ADVPAPFRG AI +ITAGL Sbjct: 121 LLNANKAEYGFLQATTQGFGAGLGFSLVLVLFAALRERIAIADVPAPFRGAAIGMITAGL 180 Query: 180 MSLAFMGFSGLVK 192 MSLAFMGFSGLV+ Sbjct: 181 MSLAFMGFSGLVR 193 >UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A subunit n=17 Tax=Bacteria RepID=B8CY11_HALOH Length = 197 Score = 229 bits (583), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 113/192 (58%), Positives = 151/192 (78%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 T LL+F+ TVLVNNF+LV+FLG+CPF+GVS+ +ETA MGLATTFVMT+ WLI+T Sbjct: 6 TRILLIFISTVLVNNFILVRFLGICPFLGVSRHVETAFSMGLATTFVMTMTGAATWLINT 65 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 +IL NL +L+ ++FI+VIA +VQF EM ++KTSPVLY+ LGI+LPLITTNCA+LG+AL Sbjct: 66 YILEMFNLPFLQYVSFIIVIASLVQFVEMFIKKTSPVLYKALGIYLPLITTNCAILGLAL 125 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMS 181 L G+NF++S ++G SA VGF+L +VL A +RE L ADVP +G I LI AG+M+ Sbjct: 126 LIPLNGYNFIESIVFGLSAGVGFTLAIVLMAGLRETLEFADVPEALKGVPITLIIAGIMA 185 Query: 182 LAFMGFSGLVKL 193 +AFMGFSG++ + Sbjct: 186 MAFMGFSGMISI 197 >UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase, electron transport complex protein rnfA n=18 Tax=Bacteria RepID=A6L724_BACV8 Length = 200 Score = 218 bits (556), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 105/190 (55%), Positives = 146/190 (76%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 +Y+L+F+ + VNN VL +FLG+CPF+GVSKK+ETA GMG A FV+T+A+I +LI + Sbjct: 2 EYILIFITAIFVNNIVLSQFLGICPFLGVSKKVETATGMGAAVAFVLTIATIVTYLIQKF 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L L YL+T+AFILVIA +VQ E++++K SP LY+ LG+FLPLITTNC +LGVA+L Sbjct: 62 VLDAFGLEYLQTIAFILVIAALVQMVEIILKKVSPALYQALGVFLPLITTNCCILGVAIL 121 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 I + L +Y FS A+GF+L MVLFA IRE+L++ ++P +G AIAL+TAGL+++ Sbjct: 122 VIQKDFDLLTGVVYAFSTALGFALAMVLFAGIREQLSLVNIPKGMQGMAIALVTAGLLAM 181 Query: 183 AFMGFSGLVK 192 AFMGFSG+ K Sbjct: 182 AFMGFSGVDK 191 >UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A subunit n=3 Tax=Bacteria RepID=A8ZY02_DESOH Length = 191 Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 101/190 (53%), Positives = 141/190 (74%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+Y+LL + +L+NN +L +FLG CPF+G SKK+ETA+GM +A FV+ +A + W +D Sbjct: 1 MTEYILLAISCILINNILLAQFLGNCPFLGTSKKMETAVGMSMAVVFVLVMAGMITWCVD 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L L+L +LRTLAFILVIA +VQF EM ++K+ P LY LGIFLPLITTNCAV+G Sbjct: 61 VFLLKWLDLEFLRTLAFILVIASLVQFVEMFLKKSIPALYAGLGIFLPLITTNCAVMGAC 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 L+NI +NFLQ+ + FS AVGF L ++LFA +RER+ + VP P + +I L+TAG++ Sbjct: 121 LINIKEEYNFLQALVASFSYAVGFGLALILFAGVRERINLGKVPKPLQDTSIGLVTAGMI 180 Query: 181 SLAFMGFSGL 190 +LAF F G+ Sbjct: 181 ALAFFAFKGM 190 >UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subunit d n=3 Tax=Bacteria RepID=B5YE59_DICT6 Length = 195 Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 96/187 (51%), Positives = 144/187 (77%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 +LF+ L+NN V ++FL LCPF+G+S ++ET++GMG A TFVM +AS+ + I +IL+ Sbjct: 9 MLFISASLINNIVFMRFLALCPFVGMSTQIETSIGMGAAVTFVMVMASVVTFFIYYYILV 68 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 PLNL++LRT+AFILVIAV+VQ EMV+++ LY+ +GI+LPLITTNCA+LGV LLNIN Sbjct: 69 PLNLLFLRTIAFILVIAVLVQLVEMVIKRFLSGLYKAMGIYLPLITTNCAILGVTLLNIN 128 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFM 185 GHN +++ +Y ++GF++ ++L A+IR+RL+ +D+P ++G I I+AGL++L F+ Sbjct: 129 YGHNLIEAIVYSLGVSLGFTIALILLASIRDRLSYSDIPEFWKGYPIVFISAGLLALIFL 188 Query: 186 GFSGLVK 192 GF GL Sbjct: 189 GFQGLAH 195 >UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW81_CLOB8 Length = 191 Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 90/191 (47%), Positives = 141/191 (73%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +Y LF+G +LVNNFVL KF+GLC F GVSK L+ ++GMG+A T V+TL+S+ AW++ Sbjct: 1 MREYFTLFIGALLVNNFVLTKFVGLCIFFGVSKSLDASIGMGMAVTSVITLSSMLAWVVY 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L+P +L +L T+ F+++IA VQ E++++K +P LY + GI+L LI TNC VL V Sbjct: 61 NFVLLPYHLTFLTTIVFVILIASFVQLLELIIKKQAPTLYSMWGIYLLLIATNCIVLSVP 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LL++ ++F++S ++ + +GF+L +VL A++RE+L ADVP P G +A I AG++ Sbjct: 121 LLSVESNYSFVKSVVFSIGSGMGFALALVLMASLREKLVYADVPKPLEGTGVAFILAGML 180 Query: 181 SLAFMGFSGLV 191 +LAF+GFSG++ Sbjct: 181 ALAFLGFSGMI 191 >UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Bulleidia extructa W1219 RepID=D2MN21_9FIRM Length = 190 Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 90/189 (47%), Positives = 135/189 (71%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D L +G + +NN +L KFLG+CPFMGVS KLE+A+GMG+A FV+ +S+ AW I + Sbjct: 2 DLFTLLIGGLFINNIILTKFLGMCPFMGVSTKLESALGMGVAVIFVIFGSSVIAWTIYHY 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L+P ++ Y+ + FIL+IA VQF E+ ++K++P LY+ LGI+LPLITTNCAVL VA Sbjct: 62 VLVPFHIEYMELITFILLIAAFVQFVELFIKKSTPALYKSLGIYLPLITTNCAVLFVAQD 121 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 NI G++ + + + + GF+L++++FA+IR RL D+P F+GN IA+I A +M++ Sbjct: 122 NIAQGYDLVHTMVNSIAIPAGFALMLLIFASIRTRLQQNDIPKAFQGNPIAMICAAIMAV 181 Query: 183 AFMGFSGLV 191 AF +GLV Sbjct: 182 AFSALAGLV 190 >UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Gammaproteobacteria RepID=C5SAZ5_CHRVI Length = 196 Score = 188 bits (477), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 99/180 (55%), Positives = 133/180 (73%), Gaps = 1/180 (0%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 L+F+ +VNNFVL FLG+CPF+GVS K ETA MGLAT FVM ++S A+ I+ W+L Sbjct: 8 LIFLNAAIVNNFVLALFLGICPFLGVSGKKETAWNMGLATMFVMLVSSAAAYGIN-WLLT 66 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 L L +LR + +I VIA VQ EM V+KTSP L+R LGIFLPLITTNCA+LG+AL + Sbjct: 67 QLGLEFLRLICYIAVIASAVQLVEMFVKKTSPALFRSLGIFLPLITTNCAILGLALFQTS 126 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFM 185 ++F+QS +Y A VGF+L ++L A +RE+LA+A VP+ +G A++L+ AGL+SLAFM Sbjct: 127 KEYDFVQSLVYALGAGVGFTLALMLMAGLREKLALARVPSVSQGAALSLMLAGLLSLAFM 186 >UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A subunit n=30 Tax=Bacteria RepID=C8WMP5_EGGLE Length = 197 Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 97/192 (50%), Positives = 135/192 (70%), Gaps = 1/192 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +Y + +LVNN+VLVKFLG+CPF+GVSKKL++A GMG A T VM LA+ W + Sbjct: 1 MAEYAAILFSMILVNNYVLVKFLGICPFLGVSKKLDSAAGMGCAVTVVMVLATAVTWPLQ 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +L L L YL+T+AFILVIAV+VQ E+V+R P L+ LG++LPLITTNCAVLGV Sbjct: 61 Q-LLNALGLGYLQTIAFILVIAVLVQMLEIVIRYFLPALHEALGVYLPLITTNCAVLGVT 119 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 +L ++ G+N+ ++ + A +GF L MVLF+ +R R+ A+ P F+G I LI+A L+ Sbjct: 120 ILAVDEGYNYPEALVAALGAGLGFLLAMVLFSGVRRRVDEAEPPKAFKGMPITLISAALV 179 Query: 181 SLAFMGFSGLVK 192 SL+FM F+G+ Sbjct: 180 SLSFMCFAGVAD 191 >UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bacteria RepID=A1WT44_HALHL Length = 193 Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 98/184 (53%), Positives = 131/184 (71%), Gaps = 1/184 (0%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ ++NNFVL FLG+CP +GVS KL TA MG+A+ FVM +AS+ A+ I+ +L Sbjct: 9 IFLNAAIINNFVLALFLGICPILGVSGKLGTAFPMGVASAFVMLIASLAAYGINI-VLGY 67 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 L +L +A+I VIA VQ EM V+K SP LYR LGIFLPLITTNCA+LGVAL + Sbjct: 68 FELEFLSLIAYIAVIASAVQLVEMFVKKFSPPLYRALGIFLPLITTNCAILGVALFQTSY 127 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMG 186 +NFLQS Y A GF L +VL A +RE++ ++DVP+ RG A++L+ AG++SLAFMG Sbjct: 128 EYNFLQSLTYSLGAGAGFILAIVLMAGLREQVDLSDVPSVARGAAMSLMLAGVLSLAFMG 187 Query: 187 FSGL 190 F+GL Sbjct: 188 FAGL 191 >UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A7HKQ4_FERNB Length = 197 Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 88/188 (46%), Positives = 134/188 (71%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 +LF ++ +N +L FLG+C F+ +SK ++++ G+GLA T VMT+ + W+I+ +++ Sbjct: 9 VLFFASIFTSNILLTNFLGMCSFISISKDIKSSNGLGLAVTLVMTITTAINWIIEKYVIA 68 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 PL+L YLR + +I+VIA VVQ EM++ + SP LY +LGIFLPLIT NCA+LGVAL Sbjct: 69 PLDLGYLRYILYIIVIAAVVQVLEMIIDRVSPNLYMVLGIFLPLITVNCAILGVALFMQL 128 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFM 185 + FLQS +G + +G+ L +VL AAIR++ A VPAP +G I LIT G+M++AF+ Sbjct: 129 RNYTFLQSVFFGLGSGMGWWLAIVLLAAIRKKTENAPVPAPLKGVGITLITIGIMAMAFI 188 Query: 186 GFSGLVKL 193 GF+G++K+ Sbjct: 189 GFAGMIKV 196 >UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA n=1 Tax=Actinobacillus pleuropneumoniae serovar 1 str. 4074 RepID=UPI0000397FA3 Length = 181 Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 102/140 (72%), Positives = 125/140 (89%) Query: 38 AMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSP 97 A+GMG+ATTFV+T+AS+ A+L++T++LIPL +LRTL FILVIAV+VQ TEM+V KTSP Sbjct: 1 AIGMGMATTFVLTVASLSAYLVETYVLIPLEAQFLRTLVFILVIAVIVQLTEMIVHKTSP 60 Query: 98 VLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRER 157 LYRLLGI+LPLITTNCAVLGVALLN+NL +N ++S LYGF AA+GFSLV+VLFAA+RER Sbjct: 61 TLYRLLGIYLPLITTNCAVLGVALLNVNLSNNLVESVLYGFGAALGFSLVLVLFAALRER 120 Query: 158 LAVADVPAPFRGNAIALITA 177 LA ADVP PF+G +IALITA Sbjct: 121 LAAADVPRPFQGASIALITA 140 >UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Acidaminococcus RepID=D2RN92_ACIFE Length = 191 Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 78/181 (43%), Positives = 125/181 (69%) Query: 10 GTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNL 69 ++ V+N +L +FLG+C F+GVSK + ++GM A +FVM L+++ ++ +L+P +L Sbjct: 10 SSIFVSNIILSRFLGMCSFLGVSKNFKNSVGMSAAVSFVMLLSTMLSYACYHLLLVPYHL 69 Query: 70 IYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHN 129 YL+TL FIL IA +VQ EM ++K P L++ +GI+LPLITTNCA+LG+AL+N+ ++ Sbjct: 70 EYLKTLVFILAIATLVQLVEMFMKKAMPSLHKAMGIYLPLITTNCAILGIALINVESNYS 129 Query: 130 FLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSG 189 FL S + ++G+++ ++LF+ IRERL +P + IALITA MS++ MG SG Sbjct: 130 FLDSCVNSIGTSIGYTMAILLFSCIRERLDEKALPKCLQNLPIALITASCMSISMMGMSG 189 Query: 190 L 190 + Sbjct: 190 I 190 >UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=Methanosarcinaceae RepID=Q12W81_METBU Length = 196 Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 90/187 (48%), Positives = 136/187 (72%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ V + NF++++FLGLC F+GV+K ++A GM A FVMTLA+ ++LI ++L+P Sbjct: 10 IFMDGVFIKNFLIIQFLGLCSFVGVTKDTKSAAGMSGAVIFVMTLAATVSFLIYNFVLVP 69 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 L L +L ++FI+VIA +VQ E VVRK P LYR LGI+LPLITTNCAVLGV LLN+ Sbjct: 70 LKLEFLDLISFIVVIAALVQLVEFVVRKNVPSLYRSLGIYLPLITTNCAVLGVVLLNVLN 129 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMG 186 ++F+QS ++G SA +G++LVM++ + IRER + +VP+ RG A + A ++S+AF+ Sbjct: 130 EYSFIQSVVFGVSAGIGYALVMLMMSGIRERTTLVNVPSSMRGLPHAFLIATMLSMAFVN 189 Query: 187 FSGLVKL 193 + G++ L Sbjct: 190 YFGVIPL 196 >UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFQ8_DESAH Length = 259 Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 129/219 (58%), Gaps = 29/219 (13%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 + D +L+ + L+NNFVL F+G+CPF+GVS++++ A GMG A TFV+T+A+ +W I Sbjct: 4 LVDIILIALSAALINNFVLYYFVGICPFIGVSRRVDMAFGMGCAVTFVITIAAFLSWTIT 63 Query: 61 TWILIP--------------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLY 100 T +LIP ++L L + +I IA VQF EM VRK P+LY Sbjct: 64 TMVLIPGAPLSSFVAGFFLSKEAASTIDLTVLSYIVYIFSIASSVQFVEMYVRKFFPILY 123 Query: 101 RLLGIFLPLITTNCAVLG---------VALLNINLGHNFLQSALYGFSAAVGFSLVMVLF 151 + G+FLPLITTNCA+L V + N + S F VGF++ +V+ Sbjct: 124 KSFGVFLPLITTNCAILFACLTIMSNVVGVENPADAWDLWHSLTLAFFGGVGFTIAIVIM 183 Query: 152 AAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGL 190 + IRE L + D+P PF+G AI L+ G+++L+FMGF+G+ Sbjct: 184 SGIREDLELCDIPEPFKGAAITLVVGGILALSFMGFTGV 222 >UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV6_DESOH Length = 255 Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/216 (40%), Positives = 127/216 (58%), Gaps = 28/216 (12%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D L+ + L+NNFVL F+G+CPF+GVS+ + A GMG A TFV+T+A+ +W I T+ Sbjct: 6 DIFLIAMSAALINNFVLYYFVGICPFIGVSRNISMAFGMGCAVTFVITIAAFISWAITTF 65 Query: 63 ILIP--------------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL 102 +LIP ++L L + +I I+ VQF EM VRK P LY+ Sbjct: 66 VLIPGAPLTAFVAGFFLPGEQAAAVDLTILSYIVYIFAISSSVQFVEMYVRKFFPPLYKS 125 Query: 103 LGIFLPLITTNCAVL--------GVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAI 154 G+FLPLITTNCA+L VA+ N + ++ + VGF++ +V+ A I Sbjct: 126 FGVFLPLITTNCAILFACLTIMSNVAVDNPAEAWDLGRALVLAIFGGVGFTIAIVIMAGI 185 Query: 155 RERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGL 190 RE L + DVP P +G AI L+TAG++++ FMGF+G+ Sbjct: 186 REELDMCDVPKPLQGAAITLVTAGILAMGFMGFTGV 221 >UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subunit E n=3 Tax=Bacteria RepID=A6DRQ4_9BACT Length = 245 Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 125/200 (62%), Gaps = 14/200 (7%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 L L + + + N + FLG+C ++ VSKK++T++GMG A FV T+ +WL+ + L Sbjct: 2 LELALKAIFIENMIFALFLGMCSYLAVSKKVDTSVGMGCAVWFVTTVTCPASWLVSNYFL 61 Query: 65 IP--------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLI 110 P L+L +L +++I +IA +VQF EM + K S LY LG+FLPLI Sbjct: 62 KPGEQNLIGQLFNKPDLDLTFLTFVSYIALIAAMVQFLEMFIEKISAKLYGSLGVFLPLI 121 Query: 111 TTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGN 170 NCA+LG +L+ + G F ++A++GFS G+ + +V+FAAIRE++ ++VP RG Sbjct: 122 AVNCAILGGSLMMNDKGFTFPEAAMFGFSGGFGWLMAIVVFAAIREKMQYSNVPKGMRGL 181 Query: 171 AIALITAGLMSLAFMGFSGL 190 IA +T GLM++AFMGF G+ Sbjct: 182 GIAFLTCGLMAMAFMGFMGI 201 >UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E subunit n=1 Tax=Treponema denticola RepID=Q73PG5_TREDE Length = 190 Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/191 (42%), Positives = 126/191 (65%), Gaps = 1/191 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + L +F+ +LV N VL++FL LCPF+G+S ++ ++GMG A FV LA+ + I Sbjct: 1 MPETLSIFLSAILVKNVVLMRFLALCPFIGMSSDVKKSVGMGWAVLFVTLLATAVTYPIY 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++LI NL +L+TL FILVIA +VQ E ++K +P LY +G++L LITTNCA+L V Sbjct: 61 NYVLIG-NLEFLQTLIFILVIASLVQLVEFYLKKAAPALYSSMGVYLALITTNCAILAVT 119 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 + I+ G+ F+Q+ ++ +A GF + ++L A +R+R+ A VP +G I I A L+ Sbjct: 120 IDAIDEGYTFVQALVHAAGSAFGFMISLLLLAGLRQRIDNAPVPKFLKGTPILFIAAALL 179 Query: 181 SLAFMGFSGLV 191 S+AF GF GL+ Sbjct: 180 SMAFEGFKGLI 190 >UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subunit E n=3 Tax=Deltaproteobacteria RepID=Q2LXT8_SYNAS Length = 323 Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 74/184 (40%), Positives = 120/184 (65%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 + +G +L+NN+V K+LGLC F+G S+K +TA+GMG+ T VM ++++ +W + ++L P Sbjct: 137 ILIGAMLINNYVFTKYLGLCVFIGTSRKKDTAVGMGITFTIVMVVSAMISWFLYQYVLKP 196 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 L YL+ + FI ++++ VQ + V+RK +P L++ G++L L+ NC ++ V L + Sbjct: 197 YRLDYLQVVVFIGLVSLTVQAVDTVLRKVNPALFKAFGVYLVLVIANCVIIAVPLTLASN 256 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMG 186 +N +S + A GF L + L +A RERL +A+VP FRG IA + GL +LAFMG Sbjct: 257 EYNAFESFMLALGAGGGFLLALFLMSASRERLELANVPPTFRGLPIAFVATGLFALAFMG 316 Query: 187 FSGL 190 FSG+ Sbjct: 317 FSGM 320 >UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MZD9_HAEIN Length = 128 Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 71/97 (73%), Positives = 84/97 (86%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT Y+LL +GT L+NNFVLVKFLGLCPFMGVSKK+ETA+GMGLAT FV+T+AS+CA+L+D Sbjct: 1 MTHYILLIIGTALINNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVD 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSP 97 +ILIPLN +LRTL FILVIAVVVQFTEM + K Sbjct: 61 HYILIPLNATFLRTLVFILVIAVVVQFTEMAINKNKS 97 >UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subunit E n=40 Tax=Bacteria RepID=NQRE_CHLTA Length = 244 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 116/205 (56%), Gaps = 17/205 (8%) Query: 3 DYLLL-----FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAW 57 DY LL F+ + N +L FLG+C ++ S +L TA G+G++ V+T+ W Sbjct: 5 DYSLLNLLGIFLQATFIQNILLSTFLGMCSYLACSSRLSTANGLGMSVALVLTITGSINW 64 Query: 58 LIDTWILIP------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGI 105 L+ +I P ++L +L + FI+VIA Q E+++ + S LY LGI Sbjct: 65 LVHYFITKPGALAWLSPALANIDLSFLELIMFIVVIAAFTQILEVLLERFSRNLYLALGI 124 Query: 106 FLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPA 165 FLPLI NCA+LG L I + FL ++ + G+ L +VLFA IRE+LA +DVP Sbjct: 125 FLPLIAVNCAILGGVLFGITRNYPFLPMVVFSLGSGCGWWLAIVLFATIREKLAYSDVPQ 184 Query: 166 PFRGNAIALITAGLMSLAFMGFSGL 190 RG I+ IT GLM++AFMG +G+ Sbjct: 185 HLRGTGISFITTGLMAMAFMGLTGI 209 >UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0U7_9DELT Length = 203 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 112/198 (56%), Gaps = 10/198 (5%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 Y +F + V N VL FLG+C F+ +S++++TA G+GLA + + LI Sbjct: 4 HYFEIFFTALFVENLVLTFFLGMCTFLAISRQVKTAFGLGLAVVIIQAITVPLNNLIYNL 63 Query: 63 ILIP----------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITT 112 +L P ++L +L L +I VIA VQ EM + + P LY LGIFLPL+T Sbjct: 64 VLQPGALGWLGLADIDLTFLGLLVYIGVIAATVQILEMFLDRYVPALYNTLGIFLPLLTV 123 Query: 113 NCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAI 172 NCA+LG +L + + +S YG A GF + +VL A IRE+L AD PA RG + Sbjct: 124 NCAILGASLFMVERDYALGESVAYGLGAGGGFLIAVVLLAGIREKLEYADPPAGLRGLGV 183 Query: 173 ALITAGLMSLAFMGFSGL 190 I AGLM++AFMG +G+ Sbjct: 184 TFIAAGLMAMAFMGIAGI 201 >UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subunit E n=23 Tax=Proteobacteria RepID=NQRE_YERPE Length = 199 Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 120/197 (60%), Gaps = 7/197 (3%) Query: 1 MTD-YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLI 59 MT+ YL +F+ V V N L FLG+C F+ +SKK+ETA G+GL T ++ +A+ LI Sbjct: 1 MTESYLTIFIRAVFVENMALNFFLGMCTFLAISKKVETAFGLGLTVTALLAIATPLNNLI 60 Query: 60 DTWILIP------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTN 113 T+IL ++L +L + FI V+A +VQ EMV+ + P L+ LG FLPL+T + Sbjct: 61 YTYILRENALIDGVDLSFLDFITFIGVLAALVQILEMVLERFLPSLHHTLGAFLPLLTIH 120 Query: 114 CAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIA 173 CA+ G + + + F +S +YG +G+ L ++ A +RE++ +++P +G I Sbjct: 121 CAIFGATIFMVQREYTFTESFVYGTGCGLGWMLAIISMAGLREKMKYSNIPKGLQGLGIV 180 Query: 174 LITAGLMSLAFMGFSGL 190 +TAGLMSL FM FSG+ Sbjct: 181 FMTAGLMSLGFMSFSGI 197 >UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase subunit E n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU9_ACHLI Length = 194 Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 119/189 (62%), Gaps = 2/189 (1%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + + LF+ ++L NN L+ LG+C + VS ++ ++ MG+A FV+T+ +I W I Sbjct: 2 ELIELFLASILSNNIALIFILGMCSLIAVSTSIKNSVNMGVAVIFVVTITAIINWPIYE- 60 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L L L FI+VIA VQF EM + K P +Y GIFLPLIT NC VL V+L Sbjct: 61 LLKATGTEQLALLVFIIVIAAFVQFLEMFLAKYFPKIYESFGIFLPLITVNCIVLSVSLF 120 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERL-AVADVPAPFRGNAIALITAGLMS 181 ++FLQ+ ++ F ++VG++ M+L A +R+++ V+++P RG AIA + G+++ Sbjct: 121 FQQRNYDFLQTTVFAFGSSVGWTFAMILLAGVRQKMYRVSNLPKGLRGRAIAFLILGILA 180 Query: 182 LAFMGFSGL 190 LAF+GF+G+ Sbjct: 181 LAFIGFTGI 189 >UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subunit E n=345 Tax=Bacteria RepID=NQRE_COLP3 Length = 207 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 116/205 (56%), Gaps = 15/205 (7%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M YL +F+ T+ + N L FLG+C F+ VSKK+ TA+G+G+A V+ LA +I Sbjct: 1 MEHYLSIFIKTIFIENMALSFFLGMCTFLAVSKKVSTAIGLGVAVVVVLGLAVPANQIIY 60 Query: 61 TWILIP---------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGI 105 IL P ++L +L + FI VIA +VQ EM++ K P LY+ LGI Sbjct: 61 QAILAPGALDSLMGITDPKESIDLSFLSFITFIGVIAALVQILEMLLDKYFPALYQALGI 120 Query: 106 FLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPA 165 FLPLIT NCA+ G + +S +YG + +G+ L +VL A +RE++ +DVP Sbjct: 121 FLPLITVNCAIFGAVSFMVAKNLTLGESVVYGVGSGIGWMLAIVLMAGLREKMKYSDVPN 180 Query: 166 PFRGNAIALITAGLMSLAFMGFSGL 190 +G I ITAGLM+ F+ F G+ Sbjct: 181 GLKGLGITFITAGLMAFGFLSFGGI 205 >UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C280_9GAMM Length = 94 Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 6/95 (6%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + L +F+ +LVNNFV FLGLCPF GVS KLETA +GLA+TFVM + +IC W ++T Sbjct: 3 SQLLWIFISALLVNNFVFSYFLGLCPFFGVSGKLETAFRLGLASTFVMLITAICTWFLNT 62 Query: 62 WILI--PLNLIYLRTLAFILVIAVVVQFTEMVVRK 94 +ILI P YLR ++FI+VIA VQF EMV++K Sbjct: 63 YILIYAP----YLRLISFIVVIASTVQFVEMVIKK 93 >UniRef50_D1NHP2 Electron transport complex protein rnfA n=1 Tax=Haemophilus influenzae HK1212 RepID=D1NHP2_HAEIN Length = 91 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/67 (71%), Positives = 58/67 (86%) Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFM 185 + N +S +YGF A++GFSLV+VLFAA+RERL AD+PA FRG+AIALITAGLMSLAFM Sbjct: 25 MADNLTESVVYGFGASLGFSLVLVLFAALRERLVTADIPATFRGSAIALITAGLMSLAFM 84 Query: 186 GFSGLVK 192 GF+GLVK Sbjct: 85 GFTGLVK 91 >UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AE2 Length = 156 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 68/91 (74%), Gaps = 1/91 (1%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ VL NNFVL FLGLCPF+GVS KL+TA+ MGLAT FVM ++S+CA+ I+ IL+ Sbjct: 9 IFLNAVLANNFVLALFLGLCPFLGVSGKLDTALPMGLATMFVMLVSSVCAFAINQ-ILVT 67 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSP 97 ++ +LR +A+I VIA VQ EM ++K +P Sbjct: 68 FDIEFLRLIAYIAVIASAVQLVEMTLKKFTP 98 >UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMP6_EGGLE Length = 235 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 6/152 (3%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 L +F +L+ N L + LGLCP + V+ + +GMG+ATTFV+ + I L+ + Sbjct: 11 LSVFSKGLLIENPTLRQMLGLCPTLAVTTAVTNGIGMGVATTFVLVCSGIVVSLLRN--I 68 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNI 124 IP + R AFI VIA V MVV P L + LGI+LPLI NC VLG A + Sbjct: 69 IPTTM---RLPAFITVIAGFVTIVMMVVEAYLPDLNQALGIYLPLIVVNCIVLGRAEVFA 125 Query: 125 NLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + H +AL G GF+L +VL +AIRE Sbjct: 126 S-KHPVKDAALDGLGMGAGFTLTLVLMSAIRE 156 >UniRef50_Q4K757 Membrane protein, putative n=2 Tax=Pseudomonas fluorescens RepID=Q4K757_PSEF5 Length = 193 Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 14/199 (7%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFM-----GVSKKLETAMGMGLATTFVMTLASIC 55 MTD+LL V T L+NNFVL LG+ P + G ++ +GLATT +M ++ Sbjct: 1 MTDFLLALVSTALINNFVLQWPLGVDPLLQAPADGARLRIHA---LGLATTALMLVSCAL 57 Query: 56 AWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCA 115 ++ +L+P L L+ A++ + +++ + + P L G++ PL+ N Sbjct: 58 GHVLYRGVLVPSGLQSLQLFAWLSLSVLLIGPALHWLPRALPSL-PFDGLW-PLLLANAG 115 Query: 116 VLGVALLNINLGHNFLQSALYGFS--AAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIA 173 +LG LL I G N + L S A +GF LV+ LF +R+R++ D+P P++G I Sbjct: 116 MLG--LLLIASGENLGLATLGAMSLGAGLGFWLVLSLFNDLRQRISTNDIPLPWQGLPID 173 Query: 174 LITAGLMSLAFMGFSGLVK 192 LI+AGL+++AF GF+GL+K Sbjct: 174 LISAGLLAVAFFGFNGLLK 192 >UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone reductasesubunit E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q255_9BACT Length = 472 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 17/204 (8%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 +L + + + + VL K LG+CP + S++++ A MG+A VMTL++ W++ + Sbjct: 271 FLPILLNALFFDGIVLSKLLGICPLLNKSRQIDAAWKMGIAVIIVMTLSTALNWVVYNKV 330 Query: 64 LI--------------PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPL 109 LI L I+ T+ FI+ IAV VQ +++RK + Y +G FL L Sbjct: 331 LIMGSDVLAKYSSMSIRLEKIFYLTV-FIVTIAVFVQTLSVMLRKFARTAYEQMGQFLEL 389 Query: 110 ITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRG 169 IT NC VL A I G +F+ S + F + + +V V A +R + A + Sbjct: 390 ITVNCIVLASATFTIPTGTSFMVSTITAFGYGLHWLMVTVWLALLRRQRLFVPTNA-WDE 448 Query: 170 NAIALITAGLMSLAFMGFSGLVKL 193 + IA++ G+M+ F G G++++ Sbjct: 449 DTIAILLLGIMAAIFTGI-GMIRI 471 >UniRef50_Q0VP36 Electron transport complex protein rnfE, putative n=10 Tax=Gammaproteobacteria RepID=Q0VP36_ALCBS Length = 238 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 82/142 (57%), Gaps = 6/142 (4%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRT 74 NN V+ LGLCP + V+ + AMG+GLAT V+ ++ C LI ++ + R Sbjct: 18 NNPATVQILGLCPLLAVTGSVVNAMGLGLATLVVLMGSNACVSLIRHYVTDAV-----RL 72 Query: 75 LAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSA 134 AF+++IA +V EM+++ + LY +LGIF+PLI TNC VLG A + + L + Sbjct: 73 PAFVMIIAAMVTVIEMLMQAYTFELYEILGIFIPLIVTNCTVLGRADAFAS-KNAVLPAM 131 Query: 135 LYGFSAAVGFSLVMVLFAAIRE 156 + G +GF +++++ +RE Sbjct: 132 VDGVMMGMGFLVILLILGGMRE 153 >UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=Methanosarcinaceae RepID=Q12W80_METBU Length = 203 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 10/163 (6%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D L F+ + +N + LGLCP + V+ ++ A+GM T FV+ IC+ L+ + Sbjct: 2 DPLSEFIRGITKDNPIFGLVLGLCPTLAVTTSIDNAIGMSAGTAFVL----ICSNLMVSG 57 Query: 63 I--LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 + IP ++ R FIL+IA V +MV+ P +Y LG+F+PLI NC ++G A Sbjct: 58 LRKQIPASV---RLPIFILIIATFVSIVKMVMEAYFPPMYAALGVFIPLIVVNCIIIGRA 114 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 N +N S + ++ GF LV+VL IRE L + Sbjct: 115 EAYAN-KNNMFYSLIDALGSSAGFLLVLVLIGGIRELLGTGGI 156 >UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP91_9FIRM Length = 198 Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 4/191 (2%) Query: 3 DYLLLFVGTVL----VNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWL 58 D L LF+ T + V N + + LG S+K E+ G+GL T+V+ ++S + Sbjct: 2 DKLALFINTAMLAMFVENAIFSRALGTSVAFYASRKKESIFGLGLGITYVIVVSSCITFF 61 Query: 59 IDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLG 118 ID W+ + L + L +++V + +++ + P ++R + ++ L N AVLG Sbjct: 62 IDGWLADWQYFYVVMPLIYTLTVSIVYTGSLLLLWRFLPKIFRNIKKYVHLSVFNAAVLG 121 Query: 119 VALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAG 178 LN +F +G A GF + + ERL +P FRG I ++ G Sbjct: 122 ALFLNTTYHADFFSYMGFGVGIAAGFFIAVFFLHIANERLNSPLIPEAFRGMPIMMVFVG 181 Query: 179 LMSLAFMGFSG 189 +MSLAF +G Sbjct: 182 IMSLAFYALTG 192 >UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E subunit n=8 Tax=Bacteria RepID=B8FN67_DESAA Length = 203 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 11/157 (7%) Query: 23 LGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI--LIPLNLIYLRTLAFILV 80 LGLCP +GV+ ++ +GMGLATTFV+ +CA L+ + + +IP + R FI+V Sbjct: 24 LGLCPTLGVTTTVQNGVGMGLATTFVL----VCANLLVSALRKVIPPKV---RIACFIVV 76 Query: 81 IAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSA 140 IA V EM+++ + LY +LGIF+PLI NC VLG A + L S G Sbjct: 77 IATFVTLVEMLMQAFTYPLYGMLGIFIPLIVVNCIVLGRA-EAFAYKNPILPSLADGLGI 135 Query: 141 AVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITA 177 +GF++ + A+RE + PF G + +++A Sbjct: 136 GLGFTMALGALGAVREVIGTGCFTVPF-GPTLTILSA 171 >UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=Vibrio cholerae 2740-80 RepID=A1F5P3_VIBCH Length = 177 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 92/161 (57%), Gaps = 6/161 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + L + + NN LV+ LGLCP + VS + A+G+G+AT V+ +++ L+ Sbjct: 1 MNENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 + +P +R F+++IA +V ++++ + LY LGIF+PLI TNC ++G A Sbjct: 61 DY--VPKE---VRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + ++ L +AL GF +G + V+V+ ++RE A+A Sbjct: 116 EAFAS-KNDVLPAALDGFWMGLGMTSVLVVLGSLRESSAMA 155 >UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax=Proteobacteria RepID=RNFE_VIBC3 Length = 230 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 90/156 (57%), Gaps = 6/156 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M++ L + + NN LV+ LGLCP + VS + A+G+G+AT V+ +++ L+ Sbjct: 1 MSENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 + +P +R F+++IA +V ++++ + LY LGIF+PLI TNC ++G A Sbjct: 61 DY--VPKE---VRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + ++ L +AL GF +G + V+V+ ++RE Sbjct: 116 EAFAS-KNDVLPAALDGFWMGLGMTSVLVVLGSLRE 150 >UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteobacteria RepID=D0D1S5_9RHOB Length = 321 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 11/159 (6%) Query: 1 MTD-YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLI 59 M+D Y + + NN V + L CP + V+ +G+GLATT V+ + + L+ Sbjct: 1 MSDIYARIARDGLWDNNVVFGQMLAHCPLLAVTGTATKGLGIGLATTAVLVASGLAVSLL 60 Query: 60 DTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLG- 118 IL +R AF+L+IA +V +M + S L+++LG+F+PLI TNCA+LG Sbjct: 61 RGAILP-----GIRIPAFVLLIACIVNVVDMALNAWSHDLHQVLGLFIPLIVTNCAILGR 115 Query: 119 -VALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 AL + N L SA G +GF+ +V+ A RE Sbjct: 116 AEALASRN---RPLASAFDGLMMGLGFTAALVVLGAARE 151 >UniRef50_B6G8I2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G8I2_9ACTN Length = 198 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 13 LVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYL 72 L NN V + +G+ + V+ + + + G +A W + T ++ P + YL Sbjct: 12 LDNNLVFAQLIGMVSVVLVAGRPQDSFRFGAMIAVATAVAGAPGWPLYTQLMQPWGVAYL 71 Query: 73 RTLAFILV--IAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNF 130 LA++LV +VV T + K+ RLL + P++ N AVL V+L N + Sbjct: 72 APLAYVLVSWAVIVVVATILGAGKSVAERERLLRV-CPIVACNAAVLAVSLGNAAVADTL 130 Query: 131 LQSALYGFS--AAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFS 188 A G S A +G L +VLFA +R+R+ VPA RG I L+TA LM+LAF G + Sbjct: 131 TWDAALGSSIGAGLGVLLAVVLFAFVRDRIDERLVPAALRGLPITLVTASLMALAFTGVA 190 Query: 189 GL 190 G+ Sbjct: 191 GI 192 >UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=A0L5G3_MAGSM Length = 222 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 85/149 (57%), Gaps = 6/149 (4%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRT 74 NN V + LG+CP +GV+ +GMGLA+ V+ A++ ++ ++I P + R Sbjct: 17 NNAVFAQLLGMCPLLGVTTTAMNGIGMGLASLVVLLGANVVVAMVRSYI--PSEV---RI 71 Query: 75 LAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSA 134 ++I+VIA V ++ + L+++LG+F+PLI NCA+LG A + ++ +SA Sbjct: 72 PSYIVVIASFVTIVDLCMNAWLHDLHKILGLFIPLIVVNCAILGRAEAFASR-NSVGKSA 130 Query: 135 LYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + G + +GF+ + + A+RE L ++ Sbjct: 131 IDGIATGLGFTFALFVLGAVREILGAGEI 159 >UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E subunit n=26 Tax=Bacteria RepID=A7HK22_FERNB Length = 217 Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 6/159 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + F ++ +N V+ LG+CP + + + GMGLA T V+ ++++ I Sbjct: 1 MASKISEFTKGIIKDNPTYVQVLGMCPTLATTTSAKNGFGMGLAATAVLVMSNVVISSIR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +P + R FI VIA V ++++ + L++ LG+F+PLI NC ++G A Sbjct: 61 K--TVPEKI---RIPIFITVIATFVTIVDLLMHAFTYDLWKTLGLFIPLIVVNCIIMGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLA 159 + H L S L G VGF+L + L +IRE L Sbjct: 116 EAYAS-KHGVLDSLLDGLGMGVGFTLSLTLLGSIRELLG 153 >UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-like n=3 Tax=Bacteria RepID=Q3A7X1_PELCD Length = 202 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 6/157 (3%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F + NN + LG+CP + V+ +GMGLATT V+ +++ + T LIP Sbjct: 6 IFSSGLWRNNAIFKLVLGMCPTLAVTTSAMNGLGMGLATTSVLLCSNMAVSALRT--LIP 63 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 + R AFI++IA V ++++ + LY+ LGIF+PLI NC +LG A + Sbjct: 64 AKV---RIPAFIVIIATFVTVVQLLMEAYAFELYQALGIFIPLIVVNCLILGRAEAFASR 120 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 SA G +GF+L +V+ +RE L + Sbjct: 121 -QPLWASAADGAGMGLGFTLALVMLGGVRELLGAGSL 156 >UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDT4_ANAPD Length = 215 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 6/153 (3%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ + NN V V+ +G+C + +S L A+GMG++ FV+ ++++ L+ +I Sbjct: 25 VFIEGIFANNPVFVQTVGMCSVLAISSSLINAIGMGVSVIFVVVMSNLVISLLRNFISD- 83 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 +R AFI++IA V +M ++ P L LGIF+PLI NC +L A Sbjct: 84 ----EIRIPAFIVIIAGFVTMVQMAIKAYLPALDESLGIFIPLIVVNCLILARA-EGFAS 138 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLA 159 H + S + G +G++ + L A RE L Sbjct: 139 SHGPVASIVDGLGQGLGYTFAISLLAFFRELLG 171 >UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AC7 Length = 201 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 4/173 (2%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCP-FMGVSKKLETAMGMGLATTFVMTLASICAWLI 59 M +Y L+ + TV + G+ + G+++ + G G TTFV+TL+SIC++L Sbjct: 1 MKEYALILISTVPGKQLRAGEVPGVVSVYGGLAQAGDRHGGWGWLTTFVLTLSSICSYLA 60 Query: 60 DTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGV 119 + ++L PL L ++RT+AFILVIAVVVQF + P G +G Sbjct: 61 NEYLLAPLGLEFMRTIAFILVIAVVVQFHRDGDAQDQPDALSGAGHLSATDHHQLRCVGA 120 Query: 120 ALLNINLGHNFLQSALYGFSAAV--GFSLVMVLFAAIRERLAVADVPAPFRGN 170 + + + N S+ + + A+ A ER+AV+DVP G Sbjct: 121 SRCSTSRS-NTASSSRHSTALALLPASPWCWCCLLASGERVAVSDVPGTLPGQ 172 >UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=8 Tax=Bacteria RepID=D1PN89_9FIRM Length = 230 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 6/150 (4%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F ++ N VL LG C + V+ + A+GMGL+ TFV+ ++I +I + Sbjct: 10 VFTAGIIRENPVLRLVLGCCSALAVTTTVSGAVGMGLSMTFVLVCSNI---VISALRKVI 66 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 ++L +I++IA V +MV++ P LY+ LG+FL LI NC +LG A + Sbjct: 67 PGKVHLP--CYIVIIATFVTVVQMVLQAFVPDLYKSLGVFLALIVVNCIILGRAEM-FAC 123 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + + SAL G +G+ L M L ++IRE Sbjct: 124 KNTVVDSALDGLGMGIGYILTMTLMSSIRE 153 >UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax=Bacteria RepID=RNFE_AZOVD Length = 238 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 10/143 (6%) Query: 16 NFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT--WILIPLNLIYLR 73 N LV+ L LCP + V+ +GMGLATT V+ + + LI + + P +R Sbjct: 29 NVALVQMLALCPTLAVTTTATNGLGMGLATTLVLVMTNA---LISSMRHTISP----EVR 81 Query: 74 TLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQS 133 I VIA VV T+M + LY++LG+F+ LI TNCAVLG A + L + + S Sbjct: 82 NPVMIGVIAGVVTLTDMAMNAWMHELYKVLGLFIALIVTNCAVLGRA-ESFCLRNPVIPS 140 Query: 134 ALYGFSAAVGFSLVMVLFAAIRE 156 L G GF+ V+V+ IRE Sbjct: 141 ILDGAGMGAGFTAVLVVIGGIRE 163 >UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN4_9BACE Length = 193 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 12/171 (7%) Query: 30 GVSKKLE----------TAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFIL 79 GV+++L+ +A+ MGL T +T + + W++ ++L P YL F+L Sbjct: 20 GVARRLKLPAPLDGGYRSALAMGLTVTVGLTASMLLCWVVYAFLLSPFGAEYLEEAFFLL 79 Query: 80 VIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALY-GF 138 + A + ++ K P L LP+ NCAVLG A+L ++ L AL G Sbjct: 80 LTAGLAWLANRLMTKFLPGKAEHLRQSLPMAAINCAVLGGAML-VSRSEVGLAPALRSGL 138 Query: 139 SAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSG 189 + +GF++ ++F ++ ER++ A VP F G IA+ AGL+ L +GF+G Sbjct: 139 LSGIGFTVAALVFVSVWERVSYARVPKSFSGFPIAMAAAGLVLLTLLGFTG 189 >UniRef50_B0P6D2 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D2_9FIRM Length = 203 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 7/195 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 ++++L+ ++ N V + LG K + G +++TL++ AW ++ Sbjct: 5 ISEFLIAAFTAAILQNAVFARGLGASGETLALNKPRGILRFGAFVIYIVTLSAALAWPLN 64 Query: 61 TWILI-----PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVL-YRLLGIFLPLITTNC 114 + + L + YL ++ +L I +V T V R P L Y L + LP N Sbjct: 65 YLLRLYRLSSRLGIRYLSSITTLLCICLVFALTYAVTRAWLPRLHYALRPLALP-AALNT 123 Query: 115 AVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIAL 174 AVLG LL + G+ +L++ + F + G++L ++L + R+R+A++DVP FRG +AL Sbjct: 124 AVLGAILLAFSSGYGYLKTCGFAFGSGAGYTLALLLISEGRKRIALSDVPRAFRGLPVAL 183 Query: 175 ITAGLMSLAFMGFSG 189 I G++SLA G G Sbjct: 184 IYIGILSLAIYGLIG 198 >UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D subunit n=1 Tax=Treponema denticola RepID=Q73PG4_TREDE Length = 219 Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 6/152 (3%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 L +F ++ NN +LV +GLC + V+ + +GMGLA TFV+ ++ + + L Sbjct: 4 LSIFTNGIIRNNPLLVLMIGLCSSLAVTTNILNGLGMGLAMTFVIVMSELIISIFRK--L 61 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNI 124 IP + +R FI+VIA +++++ +P L +G+F+ LI NC ++G + + Sbjct: 62 IPQD---IRIPVFIIVIASFTTIVDLLMQAYTPALADAMGLFIKLIVVNCIIMG-RVESF 117 Query: 125 NLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + +S L VG+++V+VL +AIRE Sbjct: 118 ASKESPGKSVLDALGMGVGYTIVLVLISAIRE 149 >UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachyspira RepID=C0R023_BRAHW Length = 219 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 12/156 (7%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ V NN V+ LG+CP + V+ + A+GM +AT FV+ +S LI Sbjct: 6 VFMEGVWKNNPTFVQVLGMCPSLAVTSSVMNAIGMSVATIFVLVCSSALISLIKK----- 60 Query: 67 LNLIY---LRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 IY +R + +I+VIA V T++V++ L LG ++PLI NC +LG A Sbjct: 61 ---IYANEVRIMGYIVVIAAFVTLTDIVMKAKFYTLSLALGPYIPLIVVNCIILGRAEAF 117 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLA 159 N + + S VGF + + L A+IRE L Sbjct: 118 AN-KNGIIPSIFDALGNGVGFFIALTLLASIREVLG 152 >UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUK9_9FIRM Length = 199 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 6/150 (4%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F +L NN ++ +GLC + ++ + ++ MG+A TFV+ +++ + +IP Sbjct: 6 VFTDAMLKNNPTFMQLIGLCSVLAITNNVINSVSMGIAVTFVLIMSNGVVSALRN--VIP 63 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 + R FI+VIA V +M+++ + +Y LGIFLPLI NC +LG A Sbjct: 64 DKI---RIPCFIVVIATFVTLVQMILQAYATPIYLALGIFLPLIVVNCCILGEA-EGFAY 119 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + + S + G VG++L +++ +RE Sbjct: 120 KNKLIPSLVDGLGTGVGYTLAVLIMGVVRE 149 >UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=Buchnera aphidicola RepID=RNFE_BUCAT Length = 227 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 8/146 (5%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW-ILIPLNLIYLR 73 NN LV+ LGLCP + ++ A+G+G+ TT V+T+ + +I ++ +IP +L R Sbjct: 14 NNSSLVQLLGLCPVLAMTTNAINAIGLGMTTTLVLTITNT---IISSFRKIIPKDL---R 67 Query: 74 TLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQS 133 ++++I+ VV EM++ + LY+ LGIF+PLI TNC ++G A L I + ++S Sbjct: 68 IPIYMMIISSVVTSIEMLLHAYTFNLYQSLGIFIPLIVTNCIIVGRADL-IAYKSSIVES 126 Query: 134 ALYGFSAAVGFSLVMVLFAAIRERLA 159 G +G M +IRE L Sbjct: 127 FFDGIFIGLGSMFAMFAVGSIREILG 152 >UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=D1B8H9_THEAS Length = 239 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 6/156 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M ++ G + N V V+ +GLCP + V+ +GMG+A T V+ +++ ++ Sbjct: 1 MASFIERIRGGLAKENPVFVQAIGLCPTLAVTTSAVNGLGMGVAATAVLMGSNVVISMLR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +I P + R AFI+VIA V + +V +PVL + LGIF+PLI NC +L A Sbjct: 61 RFI--PNQI---RIPAFIVVIAGFVTIIQFLVSAYAPVLDKSLGIFIPLIVVNCIILARA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + + S G +GF++ +++ +IRE Sbjct: 116 EA-FAFKNGVIPSLFDGIGMGLGFTVALMILGSIRE 150 >UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP2_9FIRM Length = 272 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 6/154 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 L +F ++ N VLV LG CP + + +GMG++T V+T ++I + Sbjct: 2 SKLQIFTKGIIKENPVLVLLLGTCPTLATTTSAINGVGMGVSTLVVLTCSNIAISALKK- 60 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +IP + R +I+VIA V +++++ P L + LG+F+PLI NC +LG A + Sbjct: 61 -VIPDKV---RIPCYIVVIAGFVTIVQLLLKGYVPTLDKALGLFIPLIVVNCIILGRAEM 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + ++ L S L G VGF+L + IRE Sbjct: 117 FASK-NSLLDSILDGLGMGVGFTLALGCMGLIRE 149 >UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Proteobacteria RepID=C5BTA2_TERTT Length = 253 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 8/143 (5%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASI-CAWLIDTWILIPLNLIYLR 73 NN LV+ LGLCP M V+ +GMG+ATT V+ ++S+ + L T IP +R Sbjct: 41 NNIALVQLLGLCPVMAVTTSATNGLGMGIATTAVLIISSVLVSALRHT---IPAQ---VR 94 Query: 74 TLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQS 133 I +IA V ++ + LY++LG+F+ LI TNCA+LG + + + Sbjct: 95 NPVMIAIIAGTVTLVDLAMNAWMHELYKVLGLFIALIVTNCAILGRTEA-FAMKQPPMAA 153 Query: 134 ALYGFSAAVGFSLVMVLFAAIRE 156 G +GF+ +VL RE Sbjct: 154 LADGVGMGLGFTWALVLLGGARE 176 >UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Proteobacteria RepID=C5SAZ4_CHRVI Length = 220 Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 10/144 (6%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRT 74 N V V LG+CP + V+ A+ MGLATTFV+ +S+ L+ W IP +R Sbjct: 23 ENPVFVMLLGMCPVLAVTSTTLNAIAMGLATTFVLVCSSLLISLLRNW--IPKQ---VRI 77 Query: 75 LAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLG--VALLNINLGHNFLQ 132 ++I++IA V + ++ S LY LG F+ LI NC +LG A + H L Sbjct: 78 ASYIVIIATFVTIVDYAIQAISLELYAALGAFIQLIVVNCVILGRAEAYASKQRLHTTLV 137 Query: 133 SALYGFSAAVGFSLVMVLFAAIRE 156 ++L VGF+L ++ +RE Sbjct: 138 NSL---GMGVGFTLALLALGTVRE 158 >UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subunit d n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5W2_9BACT Length = 243 Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M++ L V + N + V LG+CP + V+ + MGLA T V+ +++ + Sbjct: 1 MSNPLKTIVNGLFAENPIFVLVLGMCPTIAVTSSAMNGLSMGLAATAVLIGSNVAISALR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +I P + R +FI+VIA V ++++ P L + LGIF+PLI NC +L A Sbjct: 61 RFI--PDEI---RIPSFIVVIAGFVTALQLIIAAYFPALDKALGIFIPLIVVNCIILARA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + SA G +GF+L ++L AIRE + V Sbjct: 116 EAFASK-NGVFASACDGLGMGLGFTLALILIGAIRELIGAGSV 157 >UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E subunit n=5 Tax=Bacteria RepID=Q315L1_DESDG Length = 224 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 8/142 (5%) Query: 23 LGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIA 82 LGLCP + V+K GMG+A FV+ L+++ L+ LIP +R +I + A Sbjct: 23 LGLCPVLAVTKSANNGFGMGMAVIFVLFLSNVIISLVRN--LIPKK---VRIACYIAIAA 77 Query: 83 VVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQ-SALYGFSAA 141 +V E++++ + LY+ LGIF+PLI NC +LG A G N + +A G Sbjct: 78 SLVVAIELLMQAYAYPLYQQLGIFVPLIVVNCIILGRA--EAFAGKNPVHLAAADGLGIG 135 Query: 142 VGFSLVMVLFAAIRERLAVADV 163 +GF L + ++RE L V Sbjct: 136 MGFCLSLTFLGSLREMLGTGTV 157 >UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=Proteobacteria RepID=RNFE_MAGSA Length = 223 Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 6/142 (4%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRT 74 NN VL LG+CP M ++ +GMGLAT VM +++ + ++ +R Sbjct: 16 NNGVLCMLLGMCPTMAMTGTATNGLGMGLATAAVMAASNLMVAMFRNYVTH-----EVRI 70 Query: 75 LAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSA 134 +IL++A V F ++ + LY++LG+F+PLI +NC L L L S Sbjct: 71 PVYILIVAANVTFVDLGMNAWMHELYKVLGLFIPLIVSNCLPL-ARLEAFAAKEPVLPSF 129 Query: 135 LYGFSAAVGFSLVMVLFAAIRE 156 L G +GF+L + A+RE Sbjct: 130 LDGLFMGLGFTLALTAIGAVRE 151 >UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A682_NATTJ Length = 206 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 5/113 (4%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F +L N + + LGLCP + V++ ++G+G AT V+ A+I L+ LIP Sbjct: 7 FTQGLLKENGLYRQLLGLCPALAVTQTAMNSLGLGAATMAVLLAANIVISLVKN--LIPK 64 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 + R ++I++IA V +M + +P L+ LGIF+PLI TNC +LG A Sbjct: 65 KI---RIPSYIVIIATFVTIVDMFLEAFTPDLHAALGIFIPLIVTNCLILGRA 114 >UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C6BZT1_DESAD Length = 228 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 6/141 (4%) Query: 23 LGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIA 82 LGLCP + V+ E +GMG+A FV+T++++ I +IP + R FI++ A Sbjct: 23 LGLCPVLAVTSSAENGLGMGMAVIFVLTMSNLIISSIRK--IIPTKV---RIACFIVITA 77 Query: 83 VVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAV 142 +V E++++ + LY+ LGIF+PLI NC +LG A + + + S + Sbjct: 78 SLVVTVELLMQAYAYPLYQKLGIFVPLIVVNCLILGRAEAFASK-NGVILSIADALGMGI 136 Query: 143 GFSLVMVLFAAIRERLAVADV 163 GF++ + AIRE + V Sbjct: 137 GFAVSLTFLGAIREIIGAGTV 157 >UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E subunit n=4 Tax=Bacteria RepID=A1WT45_HALHL Length = 219 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 14/160 (8%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLAS-ICAWLIDTWILIP 66 F+ V N V V LG+CP + V+ E A+ MGLATTFV+ ++ + + L D IP Sbjct: 15 FLSGVWRENPVFVMLLGMCPVLAVTNTTENALAMGLATTFVLVCSTGLVSVLRD---FIP 71 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL---N 123 +R ++I++IA V + ++ S +Y LG F+ LI NC +LG A Sbjct: 72 KE---VRIASYIVIIASFVTVVDYAIQAISLDIYNALGAFIQLIVANCMILGRAEAFASR 128 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 LG + + GF+L ++ +RE L ++ Sbjct: 129 KPLGKTLVDA----LGVGAGFTLALLCLGTVRELLGAGEI 164 >UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1N2_HALNC Length = 231 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 10/159 (6%) Query: 1 MTD--YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWL 58 M+D Y L V + NN LV+ LG+CP M +S + ++G+ +AT M +++ A + Sbjct: 1 MSDISYRDLAVQGLWKNNPGLVQILGMCPMMAISNTVVNSLGLAMATILTMVVSNGLASV 60 Query: 59 IDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLG 118 I W+ + L + +V + E+ + LY +LGIFLPLI TNC V Sbjct: 61 IRHWVRPEVRLPVFVMVVASVVTVI-----ELWMNAYLNTLYHVLGIFLPLIVTNCIV-- 113 Query: 119 VALLNINLGHNFLQSALY-GFSAAVGFSLVMVLFAAIRE 156 +A + N + +LY G +GF LV+V IRE Sbjct: 114 IARVEGFAARNPVLPSLYDGLMMGLGFGLVLVALGVIRE 152 >UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E subunit n=11 Tax=Bacteria RepID=A1VAS6_DESVV Length = 223 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%) Query: 23 LGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIA 82 LGLCP + V+K +GMGLA FV+ L+++ ++ +IP + R FI + A Sbjct: 23 LGLCPTLAVTKTASNGLGMGLAVIFVLALSNMIISMVRN--IIPKKV---RIACFIAISA 77 Query: 83 VVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALY-GFSAA 141 +V E++++ + LY+ LGIF+PLI NC +LG A N + +L G Sbjct: 78 SLVVAVELLMQAYAYPLYQQLGIFVPLIVVNCIILGRA--EAFAAKNPVSLSLADGLGIG 135 Query: 142 VGFSLVMVLFAAIRE 156 +GF+L +V IRE Sbjct: 136 LGFTLSLVFLGGIRE 150 >UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax=Proteobacteria RepID=RNFE_ECOSM Length = 231 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 6/156 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M++ + V + NN LV+ LGLCP + V+ A+G+GLATT V+TL ++ + Sbjct: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 W P +R ++++IA VV +M++ + LY+ LGIF+PLI TNC V+G A Sbjct: 61 HW--TPAE---IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 L SAL GFS +G + M + ++RE Sbjct: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMCVLGSLRE 150 >UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4 Tax=Erysipelotrichaceae RepID=D2MN20_9FIRM Length = 216 Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 14/153 (9%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLA----SICAWLIDTWI 63 F+G ++ + V +LGLC + +S L A+GMG+ FV+ L+ S+ + I Sbjct: 9 FLGRLISESPVFSMYLGLCSTLAISTSLNNALGMGIGVIFVLVLSNMLVSMVRHITPDDI 68 Query: 64 LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 IP+ +I +IA +V M++ +P L+ LG FL LIT NC +LG A Sbjct: 69 HIPV---------YITIIATLVTVLSMLMHAFTPTLFTALGAFLDLITVNCIILGRAEA- 118 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 +N + S GF + ++ ++ A IR+ Sbjct: 119 FACKNNVVDSVKDGFQMGLAYTGALLCMAVIRQ 151 >UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C7LXH4_DESBD Length = 239 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 6/134 (4%) Query: 23 LGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIA 82 LGLCP + V+ +GMG A FV++L+++ L+ +IP + R + FI + A Sbjct: 23 LGLCPVLAVTTTANNGLGMGAAVIFVLSLSNVIISLVRN--IIPKKV---RIVCFIAIAA 77 Query: 83 VVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAV 142 +V EM+++ + LY+ LGIF+PLI NC +LG A L A G + Sbjct: 78 SLVVTVEMLMQAFAYPLYQQLGIFVPLIVVNCIILGRAEAFAAKNPPLLALA-DGLGMGI 136 Query: 143 GFSLVMVLFAAIRE 156 GF+L + ++RE Sbjct: 137 GFTLSLTFLGSLRE 150 >UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaproteobacteria RepID=C1D6V3_LARHH Length = 239 Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 5/106 (4%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRT 74 N +V+ LGLCP + VS + + +GLAT V L+ + W+ +R Sbjct: 29 QNAGVVQLLGLCPVLAVSTSIVNGVSLGLATALVTALSGAAVAAVRQWVPS-----EIRN 83 Query: 75 LAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 FI +IA +V ++ + LY +LGIF+PLITTNC VL A Sbjct: 84 PIFITIIAALVTMVDLAMNAWVHGLYNVLGIFIPLITTNCIVLARA 129 >UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E subunit n=24 Tax=Bacteria RepID=B8J067_DESDA Length = 225 Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 6/134 (4%) Query: 23 LGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIA 82 LGLCP + V+ + +GMG+A FV+ L+++ ++ + +IP + R FI++ A Sbjct: 22 LGLCPTLAVTNSADNGLGMGVAVIFVLVLSNMLISMVRS--IIPKTV---RIACFIVIAA 76 Query: 83 VVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAV 142 +V E++++ + LY+ LGIF+PLI NC +LG A + S G + Sbjct: 77 SLVVAVELLMQAYAYPLYQRLGIFVPLIVVNCIILGRA-EAFAAKNGVAASIADGLGMGL 135 Query: 143 GFSLVMVLFAAIRE 156 GF+L + ++RE Sbjct: 136 GFTLSLTFLGSLRE 149 >UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase subunit D n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU8_ACHLI Length = 219 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 6/158 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + L+ + N ++V LG+C + V+ ++E A+ MG+ TFV+ +S+ ++ Sbjct: 20 KKWFLILKNGISEENPIIVSVLGICSALAVTNRVENAIVMGIGVTFVIMASSMMVSMMRN 79 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 LIP +R +AF+++I++ +M ++ PV+ LG + LI TNC V+G A Sbjct: 80 --LIPSK---VRMVAFMVIISMFTIVVQMFLQAFLPVVAANLGAYTGLIITNCIVMGRAE 134 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLA 159 + + + + GF+ +G++LV++ AA+RE LA Sbjct: 135 A-FAIKNPVKYTIIDGFANGMGYTLVLIAIAAVREPLA 171 >UniRef50_A5VZI7 NADH:ubiquinone oxidoreductase subunit RnfA-like protein n=5 Tax=Pseudomonas RepID=A5VZI7_PSEP1 Length = 182 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 13/191 (6%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M DY+L+ + L+N+ L++ P G+ ++ GLA + L I A L+ Sbjct: 1 MNDYILVLISAALINHLCLLRQ----PLSGLQLQVH-----GLACALCIALGVIGAQLLV 51 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLP-LITTNCAVLGV 119 +L PL + L + +A++ ++ K P + ++G LP L+ +N VLG+ Sbjct: 52 HAVLAPLQIHDLALFLLLPWLALLAWGLPWLLAKWRPA-WPVVG--LPALLLSNAVVLGL 108 Query: 120 ALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGL 179 AL + + L G GF L +++FA +R+R A AD+P RG I LI AG+ Sbjct: 109 ALQQTSDDGTWPTMLLQGLLTGGGFWLALMVFADLRQRSAHADIPNALRGLPIELIGAGV 168 Query: 180 MSLAFMGFSGL 190 M++A GF+G+ Sbjct: 169 MAMALSGFNGM 179 >UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3 Tax=Rhodocyclaceae RepID=Q5P1B5_AZOSE Length = 232 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 5/103 (4%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRT 74 N LV+ LGLCP + VS + A+ +GLAT VM +++ + +I P + R Sbjct: 17 QNTGLVQLLGLCPILAVSTSVVNAVSLGLATVVVMAVSNFAVASLRNFI--PYEI---RI 71 Query: 75 LAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVL 117 FIL+IA + ++ LY +LGIF+PLI TNC VL Sbjct: 72 PVFILIIAALTTVVDLAFNAYLHDLYLVLGIFIPLIVTNCIVL 114 >UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:quinone reductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW71_9BACT Length = 210 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 9/144 (6%) Query: 17 FVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLA 76 FVLV LG+CP + V+ L+ + MG A TFV+ ++ LI + +P +R Sbjct: 20 FVLV--LGICPSLAVTTSLKNGVSMGGAATFVLVSSNFIISLIRPY--VPRE---IRIPC 72 Query: 77 FILVIAVVVQFTEMVVRKTSPV-LYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSAL 135 FI+VIA V E++++ P + LGIF+PLI NC +L A F+ S L Sbjct: 73 FIVVIASFVTIVELMMKAYLPTEINASLGIFIPLIVVNCIILYRAEAFAYKNKPFV-SIL 131 Query: 136 YGFSAAVGFSLVMVLFAAIRERLA 159 G +G++L + L + +RE L Sbjct: 132 DGLGIGLGWTLSLCLVSGVREMLG 155 >UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E subunit n=102 Tax=Bacteria RepID=A9KRX0_CLOPH Length = 253 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 6/156 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M+ L V+ N V LG+CP + V+ +GMGL TT V+ ++++ ++ Sbjct: 1 MSKALERIYNGVIKENPTFVLMLGMCPTLAVTTSAINGVGMGLTTTAVLIMSNMLISMLR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I P + R AFI+V+A V +++++ P L LGI++PLI NC +LG A Sbjct: 61 KAI--PDKV---RMPAFIVVVASFVTIVQLLLQAYLPSLNDSLGIYIPLIVVNCIILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + + S G +GF++ + L RE Sbjct: 116 EAYAS-KYPVYPSIFDGVGMGLGFTVGLTLIGLFRE 150 >UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Tax=Bacteria RepID=RNFE_PSEA7 Length = 239 Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 82/142 (57%), Gaps = 6/142 (4%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRT 74 NN LV+ LGLCP +G S A+G+GLAT V+ ++ L+ + +R Sbjct: 17 NNPGLVQLLGLCPLLGTSNSTVNALGLGLATLLVLVCSNAAVSLVRGAVSE-----AIRL 71 Query: 75 LAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSA 134 AF+++IA + E++++ + LY++LGIF+PLITTNC +LG A + L+++ Sbjct: 72 PAFVMIIAALTTCIELLMQAWTYELYQILGIFIPLITTNCVILGRAEA-FAAKNGVLRAS 130 Query: 135 LYGFSAAVGFSLVMVLFAAIRE 156 G +GF+LV+++ +RE Sbjct: 131 FDGLLTGLGFALVLLVLGGLRE 152 >UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desulfobacteraceae RepID=A8ZSV5_DESOH Length = 207 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 6/149 (4%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F+ ++ N V + LGLCP + V+ +++AM M A FV+ A++ LI IL P Sbjct: 11 FLQGIIPENPVYRQLLGLCPVLAVTGNMQSAMTMAGAVLFVLFCANVMISLIRN-ILKP- 68 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 +LR + F L IA V + + + + LG ++PLI NC ++ + + Sbjct: 69 ---HLRIVIFTLTIATFVTIVDRFLAAYMYNMSKALGPYIPLIIVNCIIICRCEVCAS-K 124 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + + ++GF+L + A +RE Sbjct: 125 QSVFHAGADAIGQSLGFALALASIATVRE 153 >UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subunit d (Na(+)-translocating nqr subunit d) n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PN80_9SPIO Length = 272 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 83/163 (50%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +Y+ +F ++ N +++ +GLC + ++ + +GMGLA TFV+ L+ + + Sbjct: 1 MKEYVRIFTNGLVKENPLIMLMIGLCSALAITTSVANGIGMGLAMTFVIVLSEMIISMFR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 + IP ++ + I +V +++++ P L +GIF+ LI NC ++G Sbjct: 61 KF--IPNDIRIPIFIIVIASFTTIV---DLLMQAFLPELSESMGIFIKLIVVNCIIMG-R 114 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + + +++ +GF+ V+V+ +AIRE L V Sbjct: 115 VESFASKESPIKAMADALGMGLGFTWVLVVMSAIRELLGSGTV 157 >UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subunit D n=132 Tax=Bacteria RepID=NQRD_AERS4 Length = 210 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 6/150 (4%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 L + VL NN + ++ LG+C + V+ +++TA M LA T V +++ LI IP Sbjct: 10 LLLTPVLGNNPIALQVLGVCSALAVTSQMKTAFVMTLAVTAVTAFSNLFISLIRN--QIP 67 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 ++ R +A + VIA +V + V++ + + + L +F+ LI TNC V+G A + Sbjct: 68 NSV---RIIAQMAVIASLVIVVDQVLKAYAYEISKQLSVFVGLIITNCIVMGRAEA-YAM 123 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 L S L G +G+ V++ A +RE Sbjct: 124 KSAPLPSFLDGIGNGLGYGAVLLTVATVRE 153 >UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subunit D n=16 Tax=Bacteria RepID=NQRD_HAEDU Length = 207 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 6/142 (4%) Query: 15 NNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRT 74 NN + ++ LG+C + V+ +L+TA M +A + V +S+ +I + IP + +R Sbjct: 17 NNPIALQILGICSALAVTTQLQTAFVMAIAVSLVTAFSSMFISMIRNY--IPNS---IRI 71 Query: 75 LAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSA 134 + + +IA +V + ++R L + L +F+ LI TNC V+G A + L+S Sbjct: 72 IVQMAIIASLVILVDQILRAYVYDLSKQLSVFVGLIITNCIVMGRAEA-FAMKSAPLESF 130 Query: 135 LYGFSAAVGFSLVMVLFAAIRE 156 + G +G+ ++V+ A +RE Sbjct: 131 VDGIGNGLGYGAMLVIVAFLRE 152 >UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 Length = 213 Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 6/150 (4%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F ++ N +LV L LCP + + + MGL FV+T + +I ++ Sbjct: 7 IFKKGLVSENPILVLALSLCPALATTSSAVNGLTMGLCVLFVITCNNTVVSIIKKFVNPK 66 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 + R +I IA +V E+V+ +P LY LGI+L L+ +L A Sbjct: 67 V-----RVPVYITCIATIVTVVELVLEAYAPELYSQLGIYLALVVVFAIILARA-ETFAS 120 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + + S G GF+L +VL + IRE Sbjct: 121 KNPVIPSFFDGLGMGCGFTLALVLISIIRE 150 >UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE35_9CLOT Length = 205 Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 6/181 (3%) Query: 12 VLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIY 71 + + N V + LG + + +K + G+ T + +AS+ A+ I+ + N Y Sbjct: 23 IFLENTVFTRALGTSTVLLMLRKKANLLLFGVVLTLITVIASVLAFWINPLLADFPNKYY 82 Query: 72 LRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITT---NCAVLGVALLNINLGH 128 + + ++L+I++V +VV++ +L RL +P+I NCAV G LL + Sbjct: 83 VTPIVYVLIISLVYVVALIVVKR---LLKRLAEELVPMIHLSAFNCAVFGALLLANSYKM 139 Query: 129 NFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFS 188 + +G + +GF+L ++ A L ++P FRG I +I G++SLAF G Sbjct: 140 TLASTIGFGLGSGLGFTLAALMLAISYNYLNSDNIPKAFRGFPITMIYVGILSLAFYGLI 199 Query: 189 G 189 G Sbjct: 200 G 200 >UniRef50_D1PJN2 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN2_9FIRM Length = 217 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%) Query: 113 NCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAI 172 + AVLG L+ N + +QS +G +A+G+ ++ + R RL DVP+ F+G Sbjct: 136 STAVLGTLLICANQNYTMMQSIAFGLGSALGYVFIIFIVREGRRRLRSKDVPSIFQGLPS 195 Query: 173 ALITAGLMSLAFMGFSG 189 +LI G++SLA G G Sbjct: 196 SLIYIGVLSLAIYGLVG 212 >UniRef50_A8S6D2 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D2_9FIRM Length = 203 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 8/183 (4%) Query: 12 VLVNNFVLVKFLG---LCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLN 68 + N V + LG + +G + GM L T V L + A+L +I N Sbjct: 19 IFAQNAVFTRALGVSRMVQLVGDDRTSSALFGMMLCITQV--LVAPVAFLAGRFIAPLDN 76 Query: 69 LIYLRTLAFILVIAVVVQFTEMVV--RKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 LR L +I IAVV +V+ ++ P +LL I +PL N VLG L+ Sbjct: 77 RAQLRPLVYIASIAVVCLAEHLVLWLLRSLPRRAQLLRI-VPLAALNSGVLGTVLVERTQ 135 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMG 186 QS +G + +G+ L ++L R RL +P FRG I L+ G+++LA G Sbjct: 136 SFTLGQSLGFGLGSGLGYVLAVLLVTEARHRLRSKAIPKAFRGLPITLVYIGVLALAVYG 195 Query: 187 FSG 189 F+G Sbjct: 196 FTG 198 >UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subunit D n=228 Tax=Bacteria RepID=NQRD_PSEA8 Length = 224 Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 6/145 (4%) Query: 12 VLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIY 71 V NN + ++ LG+C + V+ L+TA M +A T V +++ +I IP ++ Sbjct: 16 VFQNNPIGLQILGICSALAVTSNLKTATVMAIALTLVTGFSNLFISMIRR--QIPSSI-- 71 Query: 72 LRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFL 131 R + +++IA +V + V++ + L + L +F+ LI TNC V+G A + + L Sbjct: 72 -RMIVQMVIIASLVIVVDQVLKAYAYSLSKQLSVFVGLIITNCIVMGRAEA-FAMANPPL 129 Query: 132 QSALYGFSAAVGFSLVMVLFAAIRE 156 S G +G+S ++++ +RE Sbjct: 130 VSFFDGIGNGLGYSAMLLVLGFVRE 154 >UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A6TT08_ALKMQ Length = 209 Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%) Query: 12 VLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIY 71 +L +N V + LG+C + V+ + ++ MG+ FV L+S +L + Sbjct: 13 ILNDNPVFRQILGICSALAVTNLMINSLVMGIGLIFVTALSSFT-----VSVLRKHTPRH 67 Query: 72 LRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFL 131 +R + L+I+ V ++V++ P + LG ++ LI TNC ++G ++ Sbjct: 68 IRMMVQTLIISAYVIIVDIVLKAYYPSMSDALGPYVGLIITNCIIMGRC-------ESYA 120 Query: 132 QSA------LYGFSAAVGFSLVMVLFAAIRERLAVADV 163 Q+ L G ++ +G++ V++L A RE L + Sbjct: 121 QNNPPSLAFLDGIASGLGYTFVLLLIAFFRELLGFGSI 158 >UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subunit D n=15 Tax=Chlamydiales RepID=NQRD_CHLTA Length = 213 Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 6/154 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 YL F + +NN L+ LG+C + V+ + TA+ MG A +FV +S L+ Sbjct: 6 SYLTYFTDALWINNQPLIAILGICSALAVTTTVTTALTMGFAVSFVTGCSSFVVSLLRK- 64 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 + P + +R +A +++I++ V + ++ + + L +F+ LI TNC V+G A Sbjct: 65 -ITPES---VRMIAQLIIISLFVILIDQFLKAFFFTISKTLSVFVGLIITNCIVMGRA-E 119 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 ++ + + + L G + +G+ V+V + IRE Sbjct: 120 SMARHVSPIPAFLDGLGSGLGYGWVLVCISIIRE 153 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax... 188 9e-47 UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Ta... 185 8e-46 UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax... 180 2e-44 UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax... 179 4e-44 UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subun... 178 8e-44 UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A su... 175 8e-43 UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subu... 172 6e-42 UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A su... 169 5e-41 UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A su... 169 6e-41 UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A su... 168 6e-41 UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase,... 166 4e-40 UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subun... 164 1e-39 UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 164 2e-39 UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subun... 163 3e-39 UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A su... 160 2e-38 UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clos... 160 3e-38 UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subun... 155 6e-37 UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A su... 155 9e-37 UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desu... 154 1e-36 UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 154 2e-36 UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E su... 154 2e-36 UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bac... 152 5e-36 UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Ta... 152 6e-36 UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E su... 151 1e-35 UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=... 149 4e-35 UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase ... 148 1e-34 UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subun... 148 1e-34 UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteo... 145 6e-34 UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E su... 144 2e-33 UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 143 3e-33 UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E su... 143 4e-33 UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E su... 143 4e-33 UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E su... 142 6e-33 UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 139 4e-32 UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax... 139 4e-32 UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E su... 138 9e-32 UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E su... 138 1e-31 UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subun... 137 2e-31 UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E su... 137 2e-31 UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E su... 137 2e-31 UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E su... 136 5e-31 UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=... 136 6e-31 UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D su... 135 7e-31 UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E su... 135 7e-31 UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax... 134 1e-30 UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E su... 134 1e-30 UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E su... 134 2e-30 UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E su... 134 2e-30 UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:qui... 134 2e-30 UniRef50_Q0VP36 Electron transport complex protein rnfE, putativ... 134 2e-30 UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subun... 134 2e-30 UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-lik... 131 2e-29 UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachy... 128 8e-29 UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E su... 128 8e-29 UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4... 126 4e-28 UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=... 126 4e-28 UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=... 125 8e-28 UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 125 9e-28 UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=... 124 2e-27 UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=... 123 5e-27 UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax... 122 6e-27 UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E su... 122 6e-27 UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacte... 121 1e-26 UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desu... 119 7e-26 UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E su... 119 7e-26 UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaprote... 116 3e-25 UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subun... 116 4e-25 UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone redu... 115 6e-25 UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subun... 114 1e-24 UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 114 1e-24 UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subun... 114 2e-24 UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE typ... 113 3e-24 UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Ta... 113 3e-24 UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidor... 112 5e-24 UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3... 112 6e-24 UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase ... 111 9e-24 UniRef50_Q4K757 Membrane protein, putative n=2 Tax=Pseudomonas f... 110 2e-23 UniRef50_B0P6D2 Putative uncharacterized protein n=1 Tax=Anaerot... 109 7e-23 UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bactero... 104 2e-21 UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subun... 102 7e-21 UniRef50_B6G8I2 Putative uncharacterized protein n=2 Tax=Collins... 101 1e-20 UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostri... 99 1e-19 UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 T... 96 4e-19 UniRef50_A8S6D2 Putative uncharacterized protein n=2 Tax=Faecali... 96 4e-19 UniRef50_A5VZI7 NADH:ubiquinone oxidoreductase subunit RnfA-like... 92 1e-17 UniRef50_D1PJN2 Putative uncharacterized protein n=1 Tax=Subdoli... 82 1e-14 UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Begg... 78 2e-13 UniRef50_D1NHP2 Electron transport complex protein rnfA n=1 Tax=... 69 1e-10 Sequences not found previously or not previously below threshold: UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subu... 103 3e-21 UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subun... 98 2e-19 UniRef50_D1PJN1 Putative electron transport complex protein RnfE... 71 3e-11 UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bactero... 68 1e-10 UniRef50_UPI0001C372EF hypothetical protein RflaF_11025 n=1 Tax=... 68 2e-10 UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacte... 57 4e-07 UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostri... 51 3e-05 UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecali... 49 9e-05 UniRef50_B0P6D1 Putative uncharacterized protein n=1 Tax=Anaerot... 48 2e-04 UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE typ... 44 0.002 UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natran... 42 0.009 UniRef50_UPI000150A5D9 ABC transporter family protein n=1 Tax=Te... 42 0.013 UniRef50_B6G8I1 Putative uncharacterized protein n=2 Tax=Collins... 41 0.033 UniRef50_B0D6J2 Predicted protein n=2 Tax=Laccaria bicolor S238N... 40 0.036 UniRef50_A6RQM7 Putative uncharacterized protein n=2 Tax=Botryot... 39 0.078 >UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax=Gammaproteobacteria RepID=RNFA_SODGM Length = 193 Score = 188 bits (478), Expect = 9e-47, Method: Composition-based stats. Identities = 168/193 (87%), Positives = 185/193 (95%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M YL+LF+GTVLVNNFVLVKFLGLCPFMGVSKK+ETA+GMG+ATTFVMTLASICAWLI+ Sbjct: 1 MNGYLMLFIGTVLVNNFVLVKFLGLCPFMGVSKKVETALGMGMATTFVMTLASICAWLIN 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +IL+PLN+ YLRTLAFI +IAVVVQFTE+VVRKTSP LYRLLGIFLPLITTNCAVLGVA Sbjct: 61 DFILLPLNIPYLRTLAFIFIIAVVVQFTELVVRKTSPALYRLLGIFLPLITTNCAVLGVA 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LLN+N HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPF+G++IALITAGLM Sbjct: 121 LLNVNENHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFKGSSIALITAGLM 180 Query: 181 SLAFMGFSGLVKL 193 SLAFMGF+GLVK+ Sbjct: 181 SLAFMGFTGLVKV 193 >UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Tax=Bacteria RepID=RNFA_YERP3 Length = 193 Score = 185 bits (470), Expect = 8e-46, Method: Composition-based stats. Identities = 170/192 (88%), Positives = 187/192 (97%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETA+GMGLATTFV+TLAS+CAW+++ Sbjct: 1 MTEYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAWMVN 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++IL+PL LIYLRTLAFILVIAVVVQFTE+VVRKTSP LYRLLGIFLPLITTNCAVLGVA Sbjct: 61 SFILLPLGLIYLRTLAFILVIAVVVQFTELVVRKTSPTLYRLLGIFLPLITTNCAVLGVA 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LLN+N HNF+QSA+YGFSAA GFSLVMVLFAAIRERLAVADVPAPFRG++IALITAGLM Sbjct: 121 LLNVNQSHNFMQSAVYGFSAAAGFSLVMVLFAAIRERLAVADVPAPFRGSSIALITAGLM 180 Query: 181 SLAFMGFSGLVK 192 SLAFMGF+GLVK Sbjct: 181 SLAFMGFTGLVK 192 >UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax=Bacteria RepID=RNFA_PSEA8 Length = 194 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 137/193 (70%), Positives = 168/193 (87%), Gaps = 1/193 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+ L+ V +LVNNFVLV+FLGLCPFMGVS+K+ETA+G+ LATTFV+TLA++C+ ++ Sbjct: 1 MTELALILVSAILVNNFVLVQFLGLCPFMGVSRKIETAIGLSLATTFVLTLAAMCSHILQ 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L PL+L YLRT+ FILVIAVVVQFTEM+V+KTSP+LYR+LGIFLPLITTNC VLGVA Sbjct: 61 RYVLRPLDLEYLRTIGFILVIAVVVQFTEMLVKKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 121 LLNINLG-HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGL 179 LLN N + FLQ+ GF A +GFSLV+VLFAA+RER+A+ADVPAPFRG AI +ITAGL Sbjct: 121 LLNANKAEYGFLQATTQGFGAGLGFSLVLVLFAALRERIAIADVPAPFRGAAIGMITAGL 180 Query: 180 MSLAFMGFSGLVK 192 MSLAFMGFSGLV+ Sbjct: 181 MSLAFMGFSGLVR 193 >UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax=Bacteria RepID=RNFA_AZOVD Length = 194 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 139/193 (72%), Positives = 172/193 (89%), Gaps = 1/193 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+ +L+ VG +LVNNFVLV+FLGLCPFMGVSK++ETA+G+ LATTFV+TLA++C++L+ Sbjct: 1 MTELVLILVGAILVNNFVLVQFLGLCPFMGVSKRIETAIGLALATTFVLTLAAMCSYLLQ 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L+PL+L YLRT+ FILVIAVVVQFTEM+V KTSP+LYR+LGIFLPLITTNC VLGVA Sbjct: 61 RYVLVPLDLEYLRTIGFILVIAVVVQFTEMLVNKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 121 LLNINL-GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGL 179 LLN N G+ FL+S + GF A +GFSLV+VLFAA+RER+A+ADVP PF+G AI LITAGL Sbjct: 121 LLNANKAGYGFLESGINGFGAGLGFSLVLVLFAAMRERIAIADVPKPFKGAAIGLITAGL 180 Query: 180 MSLAFMGFSGLVK 192 MSLAFMGFSGL+K Sbjct: 181 MSLAFMGFSGLIK 193 >UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subunit E n=3 Tax=Bacteria RepID=A6DRQ4_9BACT Length = 245 Score = 178 bits (452), Expect = 8e-44, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 125/200 (62%), Gaps = 14/200 (7%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 L L + + + N + FLG+C ++ VSKK++T++GMG A FV T+ +WL+ + L Sbjct: 2 LELALKAIFIENMIFALFLGMCSYLAVSKKVDTSVGMGCAVWFVTTVTCPASWLVSNYFL 61 Query: 65 IP--------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLI 110 P L+L +L +++I +IA +VQF EM + K S LY LG+FLPLI Sbjct: 62 KPGEQNLIGQLFNKPDLDLTFLTFVSYIALIAAMVQFLEMFIEKISAKLYGSLGVFLPLI 121 Query: 111 TTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGN 170 NCA+LG +L+ + G F ++A++GFS G+ + +V+FAAIRE++ ++VP RG Sbjct: 122 AVNCAILGGSLMMNDKGFTFPEAAMFGFSGGFGWLMAIVVFAAIREKMQYSNVPKGMRGL 181 Query: 171 AIALITAGLMSLAFMGFSGL 190 IA +T GLM++AFMGF G+ Sbjct: 182 GIAFLTCGLMAMAFMGFMGI 201 >UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A subunit n=17 Tax=Bacteria RepID=B8CY11_HALOH Length = 197 Score = 175 bits (444), Expect = 8e-43, Method: Composition-based stats. Identities = 113/192 (58%), Positives = 151/192 (78%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 T LL+F+ TVLVNNF+LV+FLG+CPF+GVS+ +ETA MGLATTFVMT+ WLI+T Sbjct: 6 TRILLIFISTVLVNNFILVRFLGICPFLGVSRHVETAFSMGLATTFVMTMTGAATWLINT 65 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 +IL NL +L+ ++FI+VIA +VQF EM ++KTSPVLY+ LGI+LPLITTNCA+LG+AL Sbjct: 66 YILEMFNLPFLQYVSFIIVIASLVQFVEMFIKKTSPVLYKALGIYLPLITTNCAILGLAL 125 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMS 181 L G+NF++S ++G SA VGF+L +VL A +RE L ADVP +G I LI AG+M+ Sbjct: 126 LIPLNGYNFIESIVFGLSAGVGFTLAIVLMAGLRETLEFADVPEALKGVPITLIIAGIMA 185 Query: 182 LAFMGFSGLVKL 193 +AFMGFSG++ + Sbjct: 186 MAFMGFSGMISI 197 >UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subunit E n=3 Tax=Deltaproteobacteria RepID=Q2LXT8_SYNAS Length = 323 Score = 172 bits (436), Expect = 6e-42, Method: Composition-based stats. Identities = 74/188 (39%), Positives = 120/188 (63%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 + +G +L+NN+V K+LGLC F+G S+K +TA+GMG+ T VM ++++ +W + ++ Sbjct: 134 LFSILIGAMLINNYVFTKYLGLCVFIGTSRKKDTAVGMGITFTIVMVVSAMISWFLYQYV 193 Query: 64 LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 L P L YL+ + FI ++++ VQ + V+RK +P L++ G++L L+ NC ++ V L Sbjct: 194 LKPYRLDYLQVVVFIGLVSLTVQAVDTVLRKVNPALFKAFGVYLVLVIANCVIIAVPLTL 253 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLA 183 + +N +S + A GF L + L +A RERL +A+VP FRG IA + GL +LA Sbjct: 254 ASNEYNAFESFMLALGAGGGFLLALFLMSASRERLELANVPPTFRGLPIAFVATGLFALA 313 Query: 184 FMGFSGLV 191 FMGFSG+ Sbjct: 314 FMGFSGMA 321 >UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Acidaminococcus RepID=D2RN92_ACIFE Length = 191 Score = 169 bits (428), Expect = 5e-41, Method: Composition-based stats. Identities = 79/190 (41%), Positives = 127/190 (66%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + ++ V+N +L +FLG+C F+GVSK + ++GM A +FVM L+++ ++ Sbjct: 1 MHSTFGILFSSIFVSNIILSRFLGMCSFLGVSKNFKNSVGMSAAVSFVMLLSTMLSYACY 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +L+P +L YL+TL FIL IA +VQ EM ++K P L++ +GI+LPLITTNCA+LG+A Sbjct: 61 HLLLVPYHLEYLKTLVFILAIATLVQLVEMFMKKAMPSLHKAMGIYLPLITTNCAILGIA 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 L+N+ ++FL S + ++G+++ ++LF+ IRERL +P + IALITA M Sbjct: 121 LINVESNYSFLDSCVNSIGTSIGYTMAILLFSCIRERLDEKALPKCLQNLPIALITASCM 180 Query: 181 SLAFMGFSGL 190 S++ MG SG+ Sbjct: 181 SISMMGMSGI 190 >UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A subunit n=3 Tax=Bacteria RepID=A8ZY02_DESOH Length = 191 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 101/191 (52%), Positives = 141/191 (73%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+Y+LL + +L+NN +L +FLG CPF+G SKK+ETA+GM +A FV+ +A + W +D Sbjct: 1 MTEYILLAISCILINNILLAQFLGNCPFLGTSKKMETAVGMSMAVVFVLVMAGMITWCVD 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L L+L +LRTLAFILVIA +VQF EM ++K+ P LY LGIFLPLITTNCAV+G Sbjct: 61 VFLLKWLDLEFLRTLAFILVIASLVQFVEMFLKKSIPALYAGLGIFLPLITTNCAVMGAC 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 L+NI +NFLQ+ + FS AVGF L ++LFA +RER+ + VP P + +I L+TAG++ Sbjct: 121 LINIKEEYNFLQALVASFSYAVGFGLALILFAGVRERINLGKVPKPLQDTSIGLVTAGMI 180 Query: 181 SLAFMGFSGLV 191 +LAF F G+ Sbjct: 181 ALAFFAFKGMA 191 >UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Bulleidia extructa W1219 RepID=D2MN21_9FIRM Length = 190 Score = 168 bits (427), Expect = 6e-41, Method: Composition-based stats. Identities = 90/189 (47%), Positives = 135/189 (71%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D L +G + +NN +L KFLG+CPFMGVS KLE+A+GMG+A FV+ +S+ AW I + Sbjct: 2 DLFTLLIGGLFINNIILTKFLGMCPFMGVSTKLESALGMGVAVIFVIFGSSVIAWTIYHY 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L+P ++ Y+ + FIL+IA VQF E+ ++K++P LY+ LGI+LPLITTNCAVL VA Sbjct: 62 VLVPFHIEYMELITFILLIAAFVQFVELFIKKSTPALYKSLGIYLPLITTNCAVLFVAQD 121 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 NI G++ + + + + GF+L++++FA+IR RL D+P F+GN IA+I A +M++ Sbjct: 122 NIAQGYDLVHTMVNSIAIPAGFALMLLIFASIRTRLQQNDIPKAFQGNPIAMICAAIMAV 181 Query: 183 AFMGFSGLV 191 AF +GLV Sbjct: 182 AFSALAGLV 190 >UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase, electron transport complex protein rnfA n=18 Tax=Bacteria RepID=A6L724_BACV8 Length = 200 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 105/190 (55%), Positives = 146/190 (76%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 +Y+L+F+ + VNN VL +FLG+CPF+GVSKK+ETA GMG A FV+T+A+I +LI + Sbjct: 2 EYILIFITAIFVNNIVLSQFLGICPFLGVSKKVETATGMGAAVAFVLTIATIVTYLIQKF 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L L YL+T+AFILVIA +VQ E++++K SP LY+ LG+FLPLITTNC +LGVA+L Sbjct: 62 VLDAFGLEYLQTIAFILVIAALVQMVEIILKKVSPALYQALGVFLPLITTNCCILGVAIL 121 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 I + L +Y FS A+GF+L MVLFA IRE+L++ ++P +G AIAL+TAGL+++ Sbjct: 122 VIQKDFDLLTGVVYAFSTALGFALAMVLFAGIREQLSLVNIPKGMQGMAIALVTAGLLAM 181 Query: 183 AFMGFSGLVK 192 AFMGFSG+ K Sbjct: 182 AFMGFSGVDK 191 >UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subunit E n=40 Tax=Bacteria RepID=NQRE_CHLTA Length = 244 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 12/200 (6%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + L +F+ + N +L FLG+C ++ S +L TA G+G++ V+T+ WL+ + Sbjct: 10 NLLGIFLQATFIQNILLSTFLGMCSYLACSSRLSTANGLGMSVALVLTITGSINWLVHYF 69 Query: 63 ILIP------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLI 110 I P ++L +L + FI+VIA Q E+++ + S LY LGIFLPLI Sbjct: 70 ITKPGALAWLSPALANIDLSFLELIMFIVVIAAFTQILEVLLERFSRNLYLALGIFLPLI 129 Query: 111 TTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGN 170 NCA+LG L I + FL ++ + G+ L +VLFA IRE+LA +DVP RG Sbjct: 130 AVNCAILGGVLFGITRNYPFLPMVVFSLGSGCGWWLAIVLFATIREKLAYSDVPQHLRGT 189 Query: 171 AIALITAGLMSLAFMGFSGL 190 I+ IT GLM++AFMG +G+ Sbjct: 190 GISFITTGLMAMAFMGLTGI 209 >UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A7HKQ4_FERNB Length = 197 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 88/191 (46%), Positives = 135/191 (70%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + +LF ++ +N +L FLG+C F+ +SK ++++ G+GLA T VMT+ + W+I+ + Sbjct: 6 NPFVLFFASIFTSNILLTNFLGMCSFISISKDIKSSNGLGLAVTLVMTITTAINWIIEKY 65 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 ++ PL+L YLR + +I+VIA VVQ EM++ + SP LY +LGIFLPLIT NCA+LGVAL Sbjct: 66 VIAPLDLGYLRYILYIIVIAAVVQVLEMIIDRVSPNLYMVLGIFLPLITVNCAILGVALF 125 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 + FLQS +G + +G+ L +VL AAIR++ A VPAP +G I LIT G+M++ Sbjct: 126 MQLRNYTFLQSVFFGLGSGMGWWLAIVLLAAIRKKTENAPVPAPLKGVGITLITIGIMAM 185 Query: 183 AFMGFSGLVKL 193 AF+GF+G++K+ Sbjct: 186 AFIGFAGMIKV 196 >UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subunit d n=3 Tax=Bacteria RepID=B5YE59_DICT6 Length = 195 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 96/192 (50%), Positives = 145/192 (75%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 + +LF+ L+NN V ++FL LCPF+G+S ++ET++GMG A TFVM +AS+ + I Sbjct: 4 IGKLFMLFISASLINNIVFMRFLALCPFVGMSTQIETSIGMGAAVTFVMVMASVVTFFIY 63 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +IL+PLNL++LRT+AFILVIAV+VQ EMV+++ LY+ +GI+LPLITTNCA+LGV Sbjct: 64 YYILVPLNLLFLRTIAFILVIAVLVQLVEMVIKRFLSGLYKAMGIYLPLITTNCAILGVT 123 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LLNIN GHN +++ +Y ++GF++ ++L A+IR+RL+ +D+P ++G I I+AGL+ Sbjct: 124 LLNINYGHNLIEAIVYSLGVSLGFTIALILLASIRDRLSYSDIPEFWKGYPIVFISAGLL 183 Query: 181 SLAFMGFSGLVK 192 +L F+GF GL Sbjct: 184 ALIFLGFQGLAH 195 >UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A subunit n=30 Tax=Bacteria RepID=C8WMP5_EGGLE Length = 197 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 97/192 (50%), Positives = 135/192 (70%), Gaps = 1/192 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +Y + +LVNN+VLVKFLG+CPF+GVSKKL++A GMG A T VM LA+ W + Sbjct: 1 MAEYAAILFSMILVNNYVLVKFLGICPFLGVSKKLDSAAGMGCAVTVVMVLATAVTWPLQ 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +L L L YL+T+AFILVIAV+VQ E+V+R P L+ LG++LPLITTNCAVLGV Sbjct: 61 Q-LLNALGLGYLQTIAFILVIAVLVQMLEIVIRYFLPALHEALGVYLPLITTNCAVLGVT 119 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 +L ++ G+N+ ++ + A +GF L MVLF+ +R R+ A+ P F+G I LI+A L+ Sbjct: 120 ILAVDEGYNYPEALVAALGAGLGFLLAMVLFSGVRRRVDEAEPPKAFKGMPITLISAALV 179 Query: 181 SLAFMGFSGLVK 192 SL+FM F+G+ Sbjct: 180 SLSFMCFAGVAD 191 >UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW81_CLOB8 Length = 191 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 90/191 (47%), Positives = 141/191 (73%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +Y LF+G +LVNNFVL KF+GLC F GVSK L+ ++GMG+A T V+TL+S+ AW++ Sbjct: 1 MREYFTLFIGALLVNNFVLTKFVGLCIFFGVSKSLDASIGMGMAVTSVITLSSMLAWVVY 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L+P +L +L T+ F+++IA VQ E++++K +P LY + GI+L LI TNC VL V Sbjct: 61 NFVLLPYHLTFLTTIVFVILIASFVQLLELIIKKQAPTLYSMWGIYLLLIATNCIVLSVP 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LL++ ++F++S ++ + +GF+L +VL A++RE+L ADVP P G +A I AG++ Sbjct: 121 LLSVESNYSFVKSVVFSIGSGMGFALALVLMASLREKLVYADVPKPLEGTGVAFILAGML 180 Query: 181 SLAFMGFSGLV 191 +LAF+GFSG++ Sbjct: 181 ALAFLGFSGMI 191 >UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subunit E n=23 Tax=Proteobacteria RepID=NQRE_YERPE Length = 199 Score = 155 bits (393), Expect = 6e-37, Method: Composition-based stats. Identities = 75/194 (38%), Positives = 117/194 (60%), Gaps = 6/194 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 YL +F+ V V N L FLG+C F+ +SKK+ETA G+GL T ++ +A+ LI T+ Sbjct: 4 SYLTIFIRAVFVENMALNFFLGMCTFLAISKKVETAFGLGLTVTALLAIATPLNNLIYTY 63 Query: 63 ILIP------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAV 116 IL ++L +L + FI V+A +VQ EMV+ + P L+ LG FLPL+T +CA+ Sbjct: 64 ILRENALIDGVDLSFLDFITFIGVLAALVQILEMVLERFLPSLHHTLGAFLPLLTIHCAI 123 Query: 117 LGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALIT 176 G + + + F +S +YG +G+ L ++ A +RE++ +++P +G I +T Sbjct: 124 FGATIFMVQREYTFTESFVYGTGCGLGWMLAIISMAGLREKMKYSNIPKGLQGLGIVFMT 183 Query: 177 AGLMSLAFMGFSGL 190 AGLMSL FM FSG+ Sbjct: 184 AGLMSLGFMSFSGI 197 >UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Gammaproteobacteria RepID=C5SAZ5_CHRVI Length = 196 Score = 155 bits (392), Expect = 9e-37, Method: Composition-based stats. Identities = 99/180 (55%), Positives = 132/180 (73%), Gaps = 1/180 (0%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 L+F+ +VNNFVL FLG+CPF+GVS K ETA MGLAT FVM ++S A+ I W+L Sbjct: 8 LIFLNAAIVNNFVLALFLGICPFLGVSGKKETAWNMGLATMFVMLVSSAAAYGI-NWLLT 66 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 L L +LR + +I VIA VQ EM V+KTSP L+R LGIFLPLITTNCA+LG+AL + Sbjct: 67 QLGLEFLRLICYIAVIASAVQLVEMFVKKTSPALFRSLGIFLPLITTNCAILGLALFQTS 126 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFM 185 ++F+QS +Y A VGF+L ++L A +RE+LA+A VP+ +G A++L+ AGL+SLAFM Sbjct: 127 KEYDFVQSLVYALGAGVGFTLALMLMAGLREKLALARVPSVSQGAALSLMLAGLLSLAFM 186 >UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV6_DESOH Length = 255 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 86/216 (39%), Positives = 125/216 (57%), Gaps = 28/216 (12%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D L+ + L+NNFVL F+G+CPF+GVS+ + A GMG A TFV+T+A+ +W I T+ Sbjct: 6 DIFLIAMSAALINNFVLYYFVGICPFIGVSRNISMAFGMGCAVTFVITIAAFISWAITTF 65 Query: 63 ILIP--------------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL 102 +LIP ++L L + +I I+ VQF EM VRK P LY+ Sbjct: 66 VLIPGAPLTAFVAGFFLPGEQAAAVDLTILSYIVYIFAISSSVQFVEMYVRKFFPPLYKS 125 Query: 103 LGIFLPLITTNCAVLGVAL--------LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAI 154 G+FLPLITTNCA+L L N + ++ + VGF++ +V+ A I Sbjct: 126 FGVFLPLITTNCAILFACLTIMSNVAVDNPAEAWDLGRALVLAIFGGVGFTIAIVIMAGI 185 Query: 155 RERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGL 190 RE L + DVP P +G AI L+TAG++++ FMGF+G+ Sbjct: 186 REELDMCDVPKPLQGAAITLVTAGILAMGFMGFTGV 221 >UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFQ8_DESAH Length = 259 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 87/219 (39%), Positives = 128/219 (58%), Gaps = 29/219 (13%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 + D +L+ + L+NNFVL F+G+CPF+GVS++++ A GMG A TFV+T+A+ +W I Sbjct: 4 LVDIILIALSAALINNFVLYYFVGICPFIGVSRRVDMAFGMGCAVTFVITIAAFLSWTIT 63 Query: 61 TWILIP--------------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLY 100 T +LIP ++L L + +I IA VQF EM VRK P+LY Sbjct: 64 TMVLIPGAPLSSFVAGFFLSKEAASTIDLTVLSYIVYIFSIASSVQFVEMYVRKFFPILY 123 Query: 101 RLLGIFLPLITTNCAVLGVAL---------LNINLGHNFLQSALYGFSAAVGFSLVMVLF 151 + G+FLPLITTNCA+L L N + S F VGF++ +V+ Sbjct: 124 KSFGVFLPLITTNCAILFACLTIMSNVVGVENPADAWDLWHSLTLAFFGGVGFTIAIVIM 183 Query: 152 AAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGL 190 + IRE L + D+P PF+G AI L+ G+++L+FMGF+G+ Sbjct: 184 SGIREDLELCDIPEPFKGAAITLVVGGILALSFMGFTGV 222 >UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E subunit n=26 Tax=Bacteria RepID=A7HK22_FERNB Length = 217 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + F ++ +N V+ LG+CP + + + GMGLA T V+ ++++ I Sbjct: 1 MASKISEFTKGIIKDNPTYVQVLGMCPTLATTTSAKNGFGMGLAATAVLVMSNVVISSIR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 + +R FI VIA V ++++ + L++ LG+F+PLI NC ++G A Sbjct: 61 KTV-----PEKIRIPIFITVIATFVTIVDLLMHAFTYDLWKTLGLFIPLIVVNCIIMGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + H L S L G VGF+L + L +IRE L + Sbjct: 116 EAYAS-KHGVLDSLLDGLGMGVGFTLSLTLLGSIRELLGNGSI 157 >UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bacteria RepID=A1WT44_HALHL Length = 193 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 98/184 (53%), Positives = 130/184 (70%), Gaps = 1/184 (0%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ ++NNFVL FLG+CP +GVS KL TA MG+A+ FVM +AS+ A+ I +L Sbjct: 9 IFLNAAIINNFVLALFLGICPILGVSGKLGTAFPMGVASAFVMLIASLAAYGI-NIVLGY 67 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 L +L +A+I VIA VQ EM V+K SP LYR LGIFLPLITTNCA+LGVAL + Sbjct: 68 FELEFLSLIAYIAVIASAVQLVEMFVKKFSPPLYRALGIFLPLITTNCAILGVALFQTSY 127 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMG 186 +NFLQS Y A GF L +VL A +RE++ ++DVP+ RG A++L+ AG++SLAFMG Sbjct: 128 EYNFLQSLTYSLGAGAGFILAIVLMAGLREQVDLSDVPSVARGAAMSLMLAGVLSLAFMG 187 Query: 187 FSGL 190 F+GL Sbjct: 188 FAGL 191 >UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0U7_9DELT Length = 203 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 112/199 (56%), Gaps = 10/199 (5%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 Y +F + V N VL FLG+C F+ +S++++TA G+GLA + + LI Sbjct: 4 HYFEIFFTALFVENLVLTFFLGMCTFLAISRQVKTAFGLGLAVVIIQAITVPLNNLIYNL 63 Query: 63 ILIP----------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITT 112 +L P ++L +L L +I VIA VQ EM + + P LY LGIFLPL+T Sbjct: 64 VLQPGALGWLGLADIDLTFLGLLVYIGVIAATVQILEMFLDRYVPALYNTLGIFLPLLTV 123 Query: 113 NCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAI 172 NCA+LG +L + + +S YG A GF + +VL A IRE+L AD PA RG + Sbjct: 124 NCAILGASLFMVERDYALGESVAYGLGAGGGFLIAVVLLAGIREKLEYADPPAGLRGLGV 183 Query: 173 ALITAGLMSLAFMGFSGLV 191 I AGLM++AFMG +G+ Sbjct: 184 TFIAAGLMAMAFMGIAGIA 202 >UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E subunit n=1 Tax=Treponema denticola RepID=Q73PG5_TREDE Length = 190 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 82/191 (42%), Positives = 126/191 (65%), Gaps = 1/191 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + L +F+ +LV N VL++FL LCPF+G+S ++ ++GMG A FV LA+ + I Sbjct: 1 MPETLSIFLSAILVKNVVLMRFLALCPFIGMSSDVKKSVGMGWAVLFVTLLATAVTYPIY 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++LI NL +L+TL FILVIA +VQ E ++K +P LY +G++L LITTNCA+L V Sbjct: 61 NYVLI-GNLEFLQTLIFILVIASLVQLVEFYLKKAAPALYSSMGVYLALITTNCAILAVT 119 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 + I+ G+ F+Q+ ++ +A GF + ++L A +R+R+ A VP +G I I A L+ Sbjct: 120 IDAIDEGYTFVQALVHAAGSAFGFMISLLLLAGLRQRIDNAPVPKFLKGTPILFIAAALL 179 Query: 181 SLAFMGFSGLV 191 S+AF GF GL+ Sbjct: 180 SMAFEGFKGLI 190 >UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=Methanosarcinaceae RepID=Q12W81_METBU Length = 196 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 90/191 (47%), Positives = 136/191 (71%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 +F+ V + NF++++FLGLC F+GV+K ++A GM A FVMTLA+ ++LI + Sbjct: 6 SLFQIFMDGVFIKNFLIIQFLGLCSFVGVTKDTKSAAGMSGAVIFVMTLAATVSFLIYNF 65 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L+PL L +L ++FI+VIA +VQ E VVRK P LYR LGI+LPLITTNCAVLGV LL Sbjct: 66 VLVPLKLEFLDLISFIVVIAALVQLVEFVVRKNVPSLYRSLGIYLPLITTNCAVLGVVLL 125 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 N+ ++F+QS ++G SA +G++LVM++ + IRER + +VP+ RG A + A ++S+ Sbjct: 126 NVLNEYSFIQSVVFGVSAGIGYALVMLMMSGIRERTTLVNVPSSMRGLPHAFLIATMLSM 185 Query: 183 AFMGFSGLVKL 193 AF+ + G++ L Sbjct: 186 AFVNYFGVIPL 196 >UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase subunit E n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU9_ACHLI Length = 194 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 121/192 (63%), Gaps = 2/192 (1%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + + LF+ ++L NN L+ LG+C + VS ++ ++ MG+A FV+T+ +I W I Sbjct: 2 ELIELFLASILSNNIALIFILGMCSLIAVSTSIKNSVNMGVAVIFVVTITAIINWPIYE- 60 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L L L FI+VIA VQF EM + K P +Y GIFLPLIT NC VL V+L Sbjct: 61 LLKATGTEQLALLVFIIVIAAFVQFLEMFLAKYFPKIYESFGIFLPLITVNCIVLSVSLF 120 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERL-AVADVPAPFRGNAIALITAGLMS 181 ++FLQ+ ++ F ++VG++ M+L A +R+++ V+++P RG AIA + G+++ Sbjct: 121 FQQRNYDFLQTTVFAFGSSVGWTFAMILLAGVRQKMYRVSNLPKGLRGRAIAFLILGILA 180 Query: 182 LAFMGFSGLVKL 193 LAF+GF+G+ ++ Sbjct: 181 LAFIGFTGIGRV 192 >UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subunit E n=345 Tax=Bacteria RepID=NQRE_COLP3 Length = 207 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 80/205 (39%), Positives = 116/205 (56%), Gaps = 15/205 (7%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M YL +F+ T+ + N L FLG+C F+ VSKK+ TA+G+G+A V+ LA +I Sbjct: 1 MEHYLSIFIKTIFIENMALSFFLGMCTFLAVSKKVSTAIGLGVAVVVVLGLAVPANQIIY 60 Query: 61 TWILIP---------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGI 105 IL P ++L +L + FI VIA +VQ EM++ K P LY+ LGI Sbjct: 61 QAILAPGALDSLMGITDPKESIDLSFLSFITFIGVIAALVQILEMLLDKYFPALYQALGI 120 Query: 106 FLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPA 165 FLPLIT NCA+ G + +S +YG + +G+ L +VL A +RE++ +DVP Sbjct: 121 FLPLITVNCAIFGAVSFMVAKNLTLGESVVYGVGSGIGWMLAIVLMAGLREKMKYSDVPN 180 Query: 166 PFRGNAIALITAGLMSLAFMGFSGL 190 +G I ITAGLM+ F+ F G+ Sbjct: 181 GLKGLGITFITAGLMAFGFLSFGGI 205 >UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteobacteria RepID=D0D1S5_9RHOB Length = 321 Score = 145 bits (367), Expect = 6e-34, Method: Composition-based stats. Identities = 54/164 (32%), Positives = 84/164 (51%), Gaps = 7/164 (4%) Query: 1 MTD-YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLI 59 M+D Y + + NN V + L CP + V+ +G+GLATT V+ + + L+ Sbjct: 1 MSDIYARIARDGLWDNNVVFGQMLAHCPLLAVTGTATKGLGIGLATTAVLVASGLAVSLL 60 Query: 60 DTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGV 119 IL +R AF+L+IA +V +M + S L+++LG+F+PLI TNCA+LG Sbjct: 61 RGAILP-----GIRIPAFVLLIACIVNVVDMALNAWSHDLHQVLGLFIPLIVTNCAILGR 115 Query: 120 ALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 A + L SA G +GF+ +V+ A RE L + Sbjct: 116 AEALASRNRP-LASAFDGLMMGLGFTAALVVLGAAREILGSGTL 158 >UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E subunit n=102 Tax=Bacteria RepID=A9KRX0_CLOPH Length = 253 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 6/161 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M+ L V+ N V LG+CP + V+ +GMGL TT V+ ++++ ++ Sbjct: 1 MSKALERIYNGVIKENPTFVLMLGMCPTLAVTTSAINGVGMGLTTTAVLIMSNMLISMLR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R AFI+V+A V +++++ P L LGI++PLI NC +LG A Sbjct: 61 KAIPDK-----VRMPAFIVVVASFVTIVQLLLQAYLPSLNDSLGIYIPLIVVNCIILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + + S G +GF++ + L RE L Sbjct: 116 EAYAS-KYPVYPSIFDGVGMGLGFTVGLTLIGLFREILGAG 155 >UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=8 Tax=Bacteria RepID=D1PN89_9FIRM Length = 230 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 6/156 (3%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F ++ N VL LG C + V+ + A+GMGL+ TFV+ ++I + I Sbjct: 10 VFTAGIIRENPVLRLVLGCCSALAVTTTVSGAVGMGLSMTFVLVCSNIVISALRKVIPGK 69 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 ++L +I++IA V +MV++ P LY+ LG+FL LI NC +LG A Sbjct: 70 VHL-----PCYIVIIATFVTVVQMVLQAFVPDLYKSLGVFLALIVVNCIILGRAE-MFAC 123 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD 162 + + SAL G +G+ L M L ++IRE + Sbjct: 124 KNTVVDSALDGLGMGIGYILTMTLMSSIREIIGSGS 159 >UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Proteobacteria RepID=C5BTA2_TERTT Length = 253 Score = 143 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 Y F + NN LV+ LGLCP M V+ +GMG+ATT V+ ++S+ + Sbjct: 28 KRYRDYFSFGIWENNIALVQLLGLCPVMAVTTSATNGLGMGIATTAVLIISSVLVSALRH 87 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 I +R I +IA V ++ + LY++LG+F+ LI TNCA+LG Sbjct: 88 TI-----PAQVRNPVMIAIIAGTVTLVDLAMNAWMHELYKVLGLFIALIVTNCAILGRTE 142 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + + G +GF+ +VL RE L + Sbjct: 143 A-FAMKQPPMAALADGVGMGLGFTWALVLLGGAREILGSGTL 183 >UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMP6_EGGLE Length = 235 Score = 143 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 10/181 (5%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 L +F +L+ N L + LGLCP + V+ + +GMG+ATTFV+ + I L+ I Sbjct: 11 LSVFSKGLLIENPTLRQMLGLCPTLAVTTAVTNGIGMGVATTFVLVCSGIVVSLLRNII- 69 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNI 124 +R AFI VIA V MVV P L + LGI+LPLI NC VLG A + Sbjct: 70 ----PTTMRLPAFITVIAGFVTIVMMVVEAYLPDLNQALGIYLPLIVVNCIVLGRAEVFA 125 Query: 125 NLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAF 184 + H +AL G GF+L +VL +AIRE L G I L M++ Sbjct: 126 S-KHPVKDAALDGLGMGAGFTLTLVLMSAIRELLGAG----TLLGFPILLGIVEPMTVFI 180 Query: 185 M 185 M Sbjct: 181 M 181 >UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDT4_ANAPD Length = 215 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 17/193 (8%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ + NN V V+ +G+C + +S L A+GMG++ FV+ ++++ L+ +I Sbjct: 25 VFIEGIFANNPVFVQTVGMCSVLAISSSLINAIGMGVSVIFVVVMSNLVISLLRNFISD- 83 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 +R AFI++IA V +M ++ P L LGIF+PLI NC +L A Sbjct: 84 ----EIRIPAFIVIIAGFVTMVQMAIKAYLPALDESLGIFIPLIVVNCLILARAE-GFAS 138 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD------VPAP-----FRGNAIALI 175 H + S + G +G++ + L A RE L +P + A + I Sbjct: 139 SHGPVASIVDGLGQGLGYTFAISLLAFFRELLGAGTLFGAQIIPEAYTIGFLQQPASSFI 198 Query: 176 TAGLMSLAFMGFS 188 G++ AF S Sbjct: 199 VLGMLVAAFNAIS 211 >UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP2_9FIRM Length = 272 Score = 139 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 10/187 (5%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 L +F ++ N VLV LG CP + + +GMG++T V+T ++I + Sbjct: 2 SKLQIFTKGIIKENPVLVLLLGTCPTLATTTSAINGVGMGVSTLVVLTCSNIAISALKKV 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R +I+VIA V +++++ P L + LG+F+PLI NC +LG A + Sbjct: 62 I-----PDKVRIPCYIVVIAGFVTIVQLLLKGYVPTLDKALGLFIPLIVVNCIILGRAEM 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 + ++ L S L G VGF+L + IRE + G A+ MSL Sbjct: 117 FAS-KNSLLDSILDGLGMGVGFTLALGCMGLIREIVGNG----TAFGFALTKSFLTPMSL 171 Query: 183 AFMGFSG 189 M G Sbjct: 172 FMMAPGG 178 >UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax=Proteobacteria RepID=RNFE_VIBC3 Length = 230 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M++ L + + NN LV+ LGLCP + VS + A+G+G+AT V+ +++ L+ Sbjct: 1 MSENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++ +R F+++IA +V ++++ + LY LGIF+PLI TNC ++G A Sbjct: 61 DYV-----PKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + ++ L +AL GF +G + V+V+ ++RE + + Sbjct: 116 EAFAS-KNDVLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTL 157 >UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=A0L5G3_MAGSM Length = 222 Score = 138 bits (348), Expect = 9e-32, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 85/158 (53%), Gaps = 6/158 (3%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 + NN V + LG+CP +GV+ +GMGLA+ V+ A++ ++ ++I Sbjct: 8 EIVANGFWNNNAVFAQLLGMCPLLGVTTTAMNGIGMGLASLVVLLGANVVVAMVRSYI-- 65 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 +R ++I+VIA V ++ + L+++LG+F+PLI NCA+LG A + Sbjct: 66 ---PSEVRIPSYIVVIASFVTIVDLCMNAWLHDLHKILGLFIPLIVVNCAILGRAEAFAS 122 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 ++ +SA+ G + +GF+ + + A+RE L ++ Sbjct: 123 R-NSVGKSAIDGIATGLGFTFALFVLGAVREILGAGEI 159 >UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E subunit n=11 Tax=Bacteria RepID=A1VAS6_DESVV Length = 223 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 6/161 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + F + LGLCP + V+K +GMGLA FV+ L+++ ++ Sbjct: 1 MQQIIKEFTKGLWQELPPFRLVLGLCPTLAVTKTASNGLGMGLAVIFVLALSNMIISMVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R FI + A +V E++++ + LY+ LGIF+PLI NC +LG A Sbjct: 61 NII-----PKKVRIACFIAISASLVVAVELLMQAYAYPLYQQLGIFVPLIVVNCIILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + S G +GF+L +V IRE Sbjct: 116 EAFAA-KNPVSLSLADGLGIGLGFTLSLVFLGGIRELFGTG 155 >UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subunit d n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5W2_9BACT Length = 243 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M++ L V + N + V LG+CP + V+ + MGLA T V+ +++ + Sbjct: 1 MSNPLKTIVNGLFAENPIFVLVLGMCPTIAVTSSAMNGLSMGLAATAVLIGSNVAISALR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +I +R +FI+VIA V ++++ P L + LGIF+PLI NC +L A Sbjct: 61 RFI-----PDEIRIPSFIVVIAGFVTALQLIIAAYFPALDKALGIFIPLIVVNCIILARA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + SA G +GF+L ++L AIRE + V Sbjct: 116 EAFAS-KNGVFASACDGLGMGLGFTLALILIGAIRELIGAGSV 157 >UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C7LXH4_DESBD Length = 239 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 6/161 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + F + LGLCP + V+ +GMG A FV++L+++ L+ Sbjct: 1 MASMMKEFTKGLWNELPPFRLVLGLCPVLAVTTTANNGLGMGAAVIFVLSLSNVIISLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R + FI + A +V EM+++ + LY+ LGIF+PLI NC +LG A Sbjct: 61 NII-----PKKVRIVCFIAIAASLVVTVEMLMQAFAYPLYQQLGIFVPLIVVNCIILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + L + G +GF+L + ++RE Sbjct: 116 EAFAA-KNPPLLALADGLGMGIGFTLSLTFLGSLREIFGSG 155 >UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E subunit n=4 Tax=Bacteria RepID=A1WT45_HALHL Length = 219 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 6/156 (3%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F+ V N V V LG+CP + V+ E A+ MGLATTFV+ ++ ++ +I Sbjct: 15 FLSGVWRENPVFVMLLGMCPVLAVTNTTENALAMGLATTFVLVCSTGLVSVLRDFI---- 70 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 +R ++I++IA V + ++ S +Y LG F+ LI NC +LG A + Sbjct: 71 -PKEVRIASYIVIIASFVTVVDYAIQAISLDIYNALGAFIQLIVANCMILGRAEAFASRK 129 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 ++ + GF+L ++ +RE L ++ Sbjct: 130 -PLGKTLVDALGVGAGFTLALLCLGTVRELLGAGEI 164 >UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=D1B8H9_THEAS Length = 239 Score = 136 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M ++ G + N V V+ +GLCP + V+ +GMG+A T V+ +++ ++ Sbjct: 1 MASFIERIRGGLAKENPVFVQAIGLCPTLAVTTSAVNGLGMGVAATAVLMGSNVVISMLR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +I +R AFI+VIA V + +V +PVL + LGIF+PLI NC +L A Sbjct: 61 RFI-----PNQIRIPAFIVVIAGFVTIIQFLVSAYAPVLDKSLGIFIPLIVVNCIILARA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + S G +GF++ +++ +IRE + + Sbjct: 116 EA-FAFKNGVIPSLFDGIGMGLGFTVALMILGSIREIIGAGTL 157 >UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=Vibrio cholerae 2740-80 RepID=A1F5P3_VIBCH Length = 177 Score = 136 bits (342), Expect = 6e-31, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 91/161 (56%), Gaps = 6/161 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + L + + NN LV+ LGLCP + VS + A+G+G+AT V+ +++ L+ Sbjct: 1 MNENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++ +R F+++IA +V ++++ + LY LGIF+PLI TNC ++G A Sbjct: 61 DYV-----PKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + ++ L +AL GF +G + V+V+ ++RE A+A Sbjct: 116 EAFAS-KNDVLPAALDGFWMGLGMTSVLVVLGSLRESSAMA 155 >UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D subunit n=1 Tax=Treponema denticola RepID=Q73PG4_TREDE Length = 219 Score = 135 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 6/159 (3%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 L +F ++ NN +LV +GLC + V+ + +GMGLA TFV+ ++ + + I Sbjct: 4 LSIFTNGIIRNNPLLVLMIGLCSSLAVTTNILNGLGMGLAMTFVIVMSELIISIFRKLI- 62 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNI 124 +R FI+VIA +++++ +P L +G+F+ LI NC ++G + Sbjct: 63 ----PQDIRIPVFIIVIASFTTIVDLLMQAYTPALADAMGLFIKLIVVNCIIMGRVE-SF 117 Query: 125 NLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + +S L VG+++V+VL +AIRE L + Sbjct: 118 ASKESPGKSVLDALGMGVGYTIVLVLISAIREILGSGSL 156 >UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E subunit n=5 Tax=Bacteria RepID=Q315L1_DESDG Length = 224 Score = 135 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M F + LGLCP + V+K GMG+A FV+ L+++ L+ Sbjct: 1 MASMWKEFSKGLWREIPPFRLVLGLCPVLAVTKSANNGFGMGMAVIFVLFLSNVIISLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R +I + A +V E++++ + LY+ LGIF+PLI NC +LG A Sbjct: 61 NLI-----PKKVRIACYIAIAASLVVAIELLMQAYAYPLYQQLGIFVPLIVVNCIILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + +A G +GF L + ++RE L V Sbjct: 116 EA-FAGKNPVHLAAADGLGIGMGFCLSLTFLGSLREMLGTGTV 157 >UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax=Bacteria RepID=RNFE_AZOVD Length = 238 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 6/156 (3%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F + N LV+ L LCP + V+ +GMGLATT V+ + + + I Sbjct: 21 FTSALWQYNVALVQMLALCPTLAVTTTATNGLGMGLATTLVLVMTNALISSMRHTISP-- 78 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 +R I VIA VV T+M + LY++LG+F+ LI TNCAVLG A + L Sbjct: 79 ---EVRNPVMIGVIAGVVTLTDMAMNAWMHELYKVLGLFIALIVTNCAVLGRAE-SFCLR 134 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + S L G GF+ V+V+ IRE L + Sbjct: 135 NPVIPSILDGAGMGAGFTAVLVVIGGIREILGSGTL 170 >UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C6BZT1_DESAD Length = 228 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M+ + F + LGLCP + V+ E +GMG+A FV+T++++ I Sbjct: 1 MSRLVKEFAKGLWDELPPFRVLLGLCPVLAVTSSAENGLGMGMAVIFVLTMSNLIISSIR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R FI++ A +V E++++ + LY+ LGIF+PLI NC +LG A Sbjct: 61 KII-----PTKVRIACFIVITASLVVTVELLMQAYAYPLYQKLGIFVPLIVVNCLILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + + S +GF++ + AIRE + V Sbjct: 116 EAFAS-KNGVILSIADALGMGIGFAVSLTFLGAIREIIGAGTV 157 >UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E subunit n=8 Tax=Bacteria RepID=B8FN67_DESAA Length = 203 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 7/170 (4%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F + LGLCP +GV+ ++ +GMGLATTFV+ A++ + I Sbjct: 9 FTKGLWQEIPPFRLVLGLCPTLGVTTTVQNGVGMGLATTFVLVCANLLVSALRKVIPPK- 67 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 +R FI+VIA V EM+++ + LY +LGIF+PLI NC VLG A Sbjct: 68 ----VRIACFIVVIATFVTLVEMLMQAFTYPLYGMLGIFIPLIVVNCIVLGRAEA-FAYK 122 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITA 177 + L S G +GF++ + A+RE + PF G + +++A Sbjct: 123 NPILPSLADGLGIGLGFTMALGALGAVREVIGTGCFTVPF-GPTLTILSA 171 >UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E subunit n=24 Tax=Bacteria RepID=B8J067_DESDA Length = 225 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 6/159 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 L F + LGLCP + V+ + +GMG+A FV+ L+++ ++ + Sbjct: 2 SILQEFTKGLWKELPPFRLVLGLCPTLAVTNSADNGLGMGVAVIFVLVLSNMLISMVRSI 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R FI++ A +V E++++ + LY+ LGIF+PLI NC +LG A Sbjct: 62 I-----PKTVRIACFIVIAASLVVAVELLMQAYAYPLYQRLGIFVPLIVVNCIILGRAEA 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + S G +GF+L + ++RE Sbjct: 117 FAA-KNGVAASIADGLGMGLGFTLSLTFLGSLREIFGNG 154 >UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:quinone reductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW71_9BACT Length = 210 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 7/157 (4%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F + N + V LG+CP + V+ L+ + MG A TFV+ ++ LI ++ Sbjct: 9 FSKGLFKYNALFVLVLGICPSLAVTTSLKNGVSMGGAATFVLVSSNFIISLIRPYV---- 64 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSP-VLYRLLGIFLPLITTNCAVLGVALLNINL 126 +R FI+VIA V E++++ P + LGIF+PLI NC +L A Sbjct: 65 -PREIRIPCFIVVIASFVTIVELMMKAYLPTEINASLGIFIPLIVVNCIILYRAEA-FAY 122 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + S L G +G++L + L + +RE L + Sbjct: 123 KNKPFVSILDGLGIGLGWTLSLCLVSGVREMLGAGTL 159 >UniRef50_Q0VP36 Electron transport complex protein rnfE, putative n=10 Tax=Gammaproteobacteria RepID=Q0VP36_ALCBS Length = 238 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 6/161 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 +Y + + + NN V+ LGLCP + V+ + AMG+GLAT V+ ++ C LI + Sbjct: 6 NYKKISMDGLWNNNPATVQILGLCPLLAVTGSVVNAMGLGLATLVVLMGSNACVSLIRHY 65 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 + +R AF+++IA +V EM+++ + LY +LGIF+PLI TNC VLG A Sbjct: 66 VTDA-----VRLPAFVMIIAAMVTVIEMLMQAYTFELYEILGIFIPLIVTNCTVLGRADA 120 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + L + + G +GF +++++ +RE + + Sbjct: 121 FAS-KNAVLPAMVDGVMMGMGFLVILLILGGMRELVGQGTL 160 >UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subunit d (Na(+)-translocating nqr subunit d) n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PN80_9SPIO Length = 272 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +Y+ +F ++ N +++ +GLC + ++ + +GMGLA TFV+ L+ + + Sbjct: 1 MKEYVRIFTNGLVKENPLIMLMIGLCSALAITTSVANGIGMGLAMTFVIVLSEMIISMFR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +I +R FI+VIA +++++ P L +GIF+ LI NC ++G Sbjct: 61 KFI-----PNDIRIPIFIIVIASFTTIVDLLMQAFLPELSESMGIFIKLIVVNCIIMGRV 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + +++ +GF+ V+V+ +AIRE L V Sbjct: 116 E-SFASKESPIKAMADALGMGLGFTWVLVVMSAIRELLGSGTV 157 >UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-like n=3 Tax=Bacteria RepID=Q3A7X1_PELCD Length = 202 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 6/157 (3%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F + NN + LG+CP + V+ +GMGLATT V+ +++ + T I Sbjct: 6 IFSSGLWRNNAIFKLVLGMCPTLAVTTSAMNGLGMGLATTSVLLCSNMAVSALRTLI--- 62 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 +R AFI++IA V ++++ + LY+ LGIF+PLI NC +LG A + Sbjct: 63 --PAKVRIPAFIVIIATFVTVVQLLMEAYAFELYQALGIFIPLIVVNCLILGRAEAFASR 120 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 SA G +GF+L +V+ +RE L + Sbjct: 121 -QPLWASAADGAGMGLGFTLALVMLGGVRELLGAGSL 156 >UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachyspira RepID=C0R023_BRAHW Length = 219 Score = 128 bits (323), Expect = 8e-29, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 6/155 (3%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ V NN V+ LG+CP + V+ + A+GM +AT FV+ +S LI Sbjct: 6 VFMEGVWKNNPTFVQVLGMCPSLAVTSSVMNAIGMSVATIFVLVCSSALISLIKK----- 60 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 + +R + +I+VIA V T++V++ L LG ++PLI NC +LG A Sbjct: 61 IYANEVRIMGYIVVIAAFVTLTDIVMKAKFYTLSLALGPYIPLIVVNCIILGRAEA-FAN 119 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + + S VGF + + L A+IRE L Sbjct: 120 KNGIIPSIFDALGNGVGFFIALTLLASIREVLGNG 154 >UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Proteobacteria RepID=C5SAZ4_CHRVI Length = 220 Score = 128 bits (323), Expect = 8e-29, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 6/156 (3%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F+ + N V V LG+CP + V+ A+ MGLATTFV+ +S+ L+ WI Sbjct: 16 FLRGLWEENPVFVMLLGMCPVLAVTSTTLNAIAMGLATTFVLVCSSLLISLLRNWI---- 71 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 +R ++I++IA V + ++ S LY LG F+ LI NC +LG A + Sbjct: 72 -PKQVRIASYIVIIATFVTIVDYAIQAISLELYAALGAFIQLIVVNCVILGRAEAYAS-K 129 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + VGF+L ++ +RE L + Sbjct: 130 QRLHTTLVNSLGMGVGFTLALLALGTVREVLGNGTL 165 >UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4 Tax=Erysipelotrichaceae RepID=D2MN20_9FIRM Length = 216 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 6/154 (3%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F+G ++ + V +LGLC + +S L A+GMG+ FV+ L+++ ++ + P Sbjct: 9 FLGRLISESPVFSMYLGLCSTLAISTSLNNALGMGIGVIFVLVLSNMLVSMVRH--ITPD 66 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 ++ +I +IA +V M++ +P L+ LG FL LIT NC +LG A Sbjct: 67 DIH---IPVYITIIATLVTVLSMLMHAFTPTLFTALGAFLDLITVNCIILGRAEA-FACK 122 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 +N + S GF + ++ ++ A IR+ + Sbjct: 123 NNVVDSVKDGFQMGLAYTGALLCMAVIRQIVGTG 156 >UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=Methanosarcinaceae RepID=Q12W80_METBU Length = 203 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 6/161 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D L F+ + +N + LGLCP + V+ ++ A+GM T FV+ +++ + Sbjct: 2 DPLSEFIRGITKDNPIFGLVLGLCPTLAVTTSIDNAIGMSAGTAFVLICSNLMVSGLRKQ 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R FIL+IA V +MV+ P +Y LG+F+PLI NC ++G A Sbjct: 62 I-----PASVRLPIFILIIATFVSIVKMVMEAYFPPMYAALGVFIPLIVVNCIIIGRAEA 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 N +N S + ++ GF LV+VL IRE L + Sbjct: 117 YAN-KNNMFYSLIDALGSSAGFLLVLVLIGGIRELLGTGGI 156 >UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=Proteobacteria RepID=RNFE_MAGSA Length = 223 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 Y + + NN VL LG+CP M ++ +GMGLAT VM +++ + Sbjct: 3 ASYGRIIKDGLWENNGVLCMLLGMCPTMAMTGTATNGLGMGLATAAVMAASNLMVAMFRN 62 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 ++ +R +IL++A V F ++ + LY++LG+F+PLI +NC L Sbjct: 63 YVT-----HEVRIPVYILIVAANVTFVDLGMNAWMHELYKVLGLFIPLIVSNCLPLARLE 117 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 L S L G +GF+L + A+RE + + Sbjct: 118 AFAA-KEPVLPSFLDGLFMGLGFTLALTAIGAVREMIGQGTL 158 >UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 Length = 213 Score = 125 bits (314), Expect = 9e-28, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +F ++ N +LV L LCP + + + MGL FV+T + +I Sbjct: 1 MKGLWNIFKKGLVSENPILVLALSLCPALATTSSAVNGLTMGLCVLFVITCNNTVVSIIK 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++ +R +I IA +V E+V+ +P LY LGI+L L+ +L A Sbjct: 61 KFVNPK-----VRVPVYITCIATIVTVVELVLEAYAPELYSQLGIYLALVVVFAIILARA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + S G GF+L +VL + IRE V Sbjct: 116 E-TFASKNPVIPSFFDGLGMGCGFTLALVLISIIRELFGAGTV 157 >UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUK9_9FIRM Length = 199 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 6/157 (3%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F +L NN ++ +GLC + ++ + ++ MG+A TFV+ +++ + I Sbjct: 6 VFTDAMLKNNPTFMQLIGLCSVLAITNNVINSVSMGIAVTFVLIMSNGVVSALRNVIPDK 65 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 +R FI+VIA V +M+++ + +Y LGIFLPLI NC +LG A Sbjct: 66 -----IRIPCFIVVIATFVTLVQMILQAYATPIYLALGIFLPLIVVNCCILGEAE-GFAY 119 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + S + G VG++L +++ +RE + Sbjct: 120 KNKLIPSLVDGLGTGVGYTLAVLIMGVVREFFGYGSL 156 >UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=Buchnera aphidicola RepID=RNFE_BUCAT Length = 227 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 6/154 (3%) Query: 10 GTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNL 69 + NN LV+ LGLCP + ++ A+G+G+ TT V+T+ + I Sbjct: 9 NRLWKNNSSLVQLLGLCPVLAMTTNAINAIGLGMTTTLVLTITNTIISSFRKII-----P 63 Query: 70 IYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHN 129 LR ++++I+ VV EM++ + LY+ LGIF+PLI TNC ++G A L I + Sbjct: 64 KDLRIPIYMMIISSVVTSIEMLLHAYTFNLYQSLGIFIPLIVTNCIIVGRADL-IAYKSS 122 Query: 130 FLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 ++S G +G M +IRE L + Sbjct: 123 IVESFFDGIFIGLGSMFAMFAVGSIREILGNGTL 156 >UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax=Proteobacteria RepID=RNFE_ECOSM Length = 231 Score = 122 bits (307), Expect = 6e-27, Method: Composition-based stats. Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M++ + V + NN LV+ LGLCP + V+ A+G+GLATT V+TL ++ + Sbjct: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 W +R ++++IA VV +M++ + LY+ LGIF+PLI TNC V+G A Sbjct: 61 HW-----TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 L SAL GFS +G + M + ++RE + + Sbjct: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMCVLGSLREIIGNGTL 157 >UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A682_NATTJ Length = 206 Score = 122 bits (307), Expect = 6e-27, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + F +L N + + LGLCP + V++ ++G+G AT V+ A+I L+ Sbjct: 2 KFSEAFTQGLLKENGLYRQLLGLCPALAVTQTAMNSLGLGAATMAVLLAANIVISLVKNL 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R ++I++IA V +M + +P L+ LGIF+PLI TNC +LG A Sbjct: 62 I-----PKKIRIPSYIVIIATFVTIVDMFLEAFTPDLHAALGIFIPLIVTNCLILGRAEA 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + +GF+L ++ +RE + Sbjct: 117 FAS-KEKVTSAIGDALGMGIGFTLGLLSLGVVRELFGKGSL 156 >UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP91_9FIRM Length = 198 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%) Query: 3 DYLLLFVG----TVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWL 58 D L LF+ + V N + + LG S+K E+ G+GL T+V+ ++S + Sbjct: 2 DKLALFINTAMLAMFVENAIFSRALGTSVAFYASRKKESIFGLGLGITYVIVVSSCITFF 61 Query: 59 IDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLG 118 ID W+ + L + L +++V + +++ + P ++R + ++ L N AVLG Sbjct: 62 IDGWLADWQYFYVVMPLIYTLTVSIVYTGSLLLLWRFLPKIFRNIKKYVHLSVFNAAVLG 121 Query: 119 VALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAG 178 LN +F +G A GF + + ERL +P FRG I ++ G Sbjct: 122 ALFLNTTYHADFFSYMGFGVGIAAGFFIAVFFLHIANERLNSPLIPEAFRGMPIMMVFVG 181 Query: 179 LMSLAFMGFSG 189 +MSLAF +G Sbjct: 182 IMSLAFYALTG 192 >UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desulfobacteraceae RepID=A8ZSV5_DESOH Length = 207 Score = 119 bits (298), Expect = 7e-26, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 6/154 (3%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F+ ++ N V + LGLCP + V+ +++AM M A FV+ A++ LI + Sbjct: 11 FLQGIIPENPVYRQLLGLCPVLAVTGNMQSAMTMAGAVLFVLFCANVMISLIRNIL---- 66 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 +LR + F L IA V + + + + LG ++PLI NC ++ + + Sbjct: 67 -KPHLRIVIFTLTIATFVTIVDRFLAAYMYNMSKALGPYIPLIIVNCIIICRCEVCAS-K 124 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + + ++GF+L + A +RE L Sbjct: 125 QSVFHAGADAIGQSLGFALALASIATVREILGTG 158 >UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1N2_HALNC Length = 231 Score = 119 bits (298), Expect = 7e-26, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 6/161 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 Y L V + NN LV+ LG+CP M +S + ++G+ +AT M +++ A +I W Sbjct: 5 SYRDLAVQGLWKNNPGLVQILGMCPMMAISNTVVNSLGLAMATILTMVVSNGLASVIRHW 64 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 + +R F++V+A VV E+ + LY +LGIFLPLI TNC V+ Sbjct: 65 VRP-----EVRLPVFVMVVASVVTVIELWMNAYLNTLYHVLGIFLPLIVTNCIVIARVEG 119 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + L S G +GF LV+V IRE L + Sbjct: 120 FAAR-NPVLPSLYDGLMMGLGFGLVLVALGVIRELLGFGTL 159 >UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaproteobacteria RepID=C1D6V3_LARHH Length = 239 Score = 116 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + + + + N +V+ LGLCP + VS + + +GLAT V L+ + Sbjct: 16 SPWKSIAFNGIWKQNAGVVQLLGLCPVLAVSTSIVNGVSLGLATALVTALSGAAVAAVRQ 75 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 W+ +R FI +IA +V ++ + LY +LGIF+PLITTNC VL A Sbjct: 76 WV-----PSEIRNPIFITIIAALVTMVDLAMNAWVHGLYNVLGIFIPLITTNCIVLARAE 130 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + +SA G +G + V+ L A+RE + Sbjct: 131 AFAS-KNPVRESAWDGLMMGLGLTGVLGLLGAMRELFGKGTL 171 >UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subunit D n=132 Tax=Bacteria RepID=NQRD_AERS4 Length = 210 Score = 116 bits (291), Expect = 4e-25, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 6/160 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 ++ L + VL NN + ++ LG+C + V+ +++TA M LA T V +++ LI Sbjct: 5 SEMKKLLLTPVLGNNPIALQVLGVCSALAVTSQMKTAFVMTLAVTAVTAFSNLFISLIRN 64 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 I +R +A + VIA +V + V++ + + + L +F+ LI TNC V+G A Sbjct: 65 QI-----PNSVRIIAQMAVIASLVIVVDQVLKAYAYEISKQLSVFVGLIITNCIVMGRAE 119 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + L S L G +G+ V++ A +RE L Sbjct: 120 AY-AMKSAPLPSFLDGIGNGLGYGAVLLTVATVREILGSG 158 >UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone reductasesubunit E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q255_9BACT Length = 472 Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 15/203 (7%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 +L + + + + VL K LG+CP + S++++ A MG+A VMTL++ W++ + Sbjct: 271 FLPILLNALFFDGIVLSKLLGICPLLNKSRQIDAAWKMGIAVIIVMTLSTALNWVVYNKV 330 Query: 64 LIPLN-------------LIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLI 110 LI + FI+ IAV VQ +++RK + Y +G FL LI Sbjct: 331 LIMGSDVLAKYSSMSIRLEKIFYLTVFIVTIAVFVQTLSVMLRKFARTAYEQMGQFLELI 390 Query: 111 TTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGN 170 T NC VL A I G +F+ S + F + + +V V A +R + + + Sbjct: 391 TVNCIVLASATFTIPTGTSFMVSTITAFGYGLHWLMVTVWLALLRRQRLFVPTN-AWDED 449 Query: 171 AIALITAGLMSLAFMGFSGLVKL 193 IA++ G+M+ F G G++++ Sbjct: 450 TIAILLLGIMAAIFTGI-GMIRI 471 Score = 71.0 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%) Query: 23 LGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIA 82 LG C + V+ KLE ++ MGL FV + + I I + + L +++++ Sbjct: 28 LGFCSALAVTNKLENSLTMGLGVLFVAMGSFSLIYPFRRLITIAGSHHKISLL--MIIVS 85 Query: 83 VVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAV 142 V V + P + + ++ LITTNC VL V + + F ++ A + Sbjct: 86 VFVTIFAFFAQAFVPEVAASIRAYIDLITTNCIVLAVISEGLTV--PFWEAQKKILKACM 143 Query: 143 GFSLVMVLFAAIRERLAVADV 163 G++ ++L A +RE L + Sbjct: 144 GYAFALILLAFLREPLGFGTI 164 >UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subunit D n=16 Tax=Bacteria RepID=NQRD_HAEDU Length = 207 Score = 114 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + L + + NN + ++ LG+C + V+ +L+TA M +A + V +S+ +I Sbjct: 4 NNLKKLLLSPISDNNPIALQILGICSALAVTTQLQTAFVMAIAVSLVTAFSSMFISMIRN 63 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 +I +R + + +IA +V + ++R L + L +F+ LI TNC V+G A Sbjct: 64 YI-----PNSIRIIVQMAIIASLVILVDQILRAYVYDLSKQLSVFVGLIITNCIVMGRAE 118 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + L+S + G +G+ ++V+ A +RE + + Sbjct: 119 A-FAMKSAPLESFVDGIGNGLGYGAMLVIVAFLRELIGSGKI 159 >UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A6TT08_ALKMQ Length = 209 Score = 114 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 6/157 (3%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F +L +N V + LG+C + V+ + ++ MG+ FV L+S ++ Sbjct: 8 IFQLGILNDNPVFRQILGICSALAVTNLMINSLVMGIGLIFVTALSSFTVSVLRK----- 62 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 ++R + L+I+ V ++V++ P + LG ++ LI TNC ++G + Sbjct: 63 HTPRHIRMMVQTLIISAYVIIVDIVLKAYYPSMSDALGPYVGLIITNCIIMGRCE-SYAQ 121 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + L G ++ +G++ V++L A RE L + Sbjct: 122 NNPPSLAFLDGIASGLGYTFVLLLIAFFRELLGFGSI 158 >UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subunit D n=228 Tax=Bacteria RepID=NQRD_PSEA8 Length = 224 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 6/158 (3%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 + V NN + ++ LG+C + V+ L+TA M +A T V +++ +I I Sbjct: 8 IREVLFNPVFQNNPIGLQILGICSALAVTSNLKTATVMAIALTLVTGFSNLFISMIRRQI 67 Query: 64 LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 +R + +++IA +V + V++ + L + L +F+ LI TNC V+G A Sbjct: 68 -----PSSIRMIVQMVIIASLVIVVDQVLKAYAYSLSKQLSVFVGLIITNCIVMGRAEA- 121 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + + L S G +G+S ++++ +RE Sbjct: 122 FAMANPPLVSFFDGIGNGLGYSAMLLVLGFVRELFGAG 159 >UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AC7 Length = 201 Score = 113 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 4/173 (2%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCP-FMGVSKKLETAMGMGLATTFVMTLASICAWLI 59 M +Y L+ + TV + G+ + G+++ + G G TTFV+TL+SIC++L Sbjct: 1 MKEYALILISTVPGKQLRAGEVPGVVSVYGGLAQAGDRHGGWGWLTTFVLTLSSICSYLA 60 Query: 60 DTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGV 119 + ++L PL L ++RT+AFILVIAVVVQF + P G +G Sbjct: 61 NEYLLAPLGLEFMRTIAFILVIAVVVQFHRDGDAQDQPDALSGAGHLSATDHHQLRCVGA 120 Query: 120 ALLNINLGHNFLQSALYGFSAAV--GFSLVMVLFAAIRERLAVADVPAPFRGN 170 + + + + S+ + + A+ A ER+AV+DVP G Sbjct: 121 SRCSTSRSNT-ASSSRHSTALALLPASPWCWCCLLASGERVAVSDVPGTLPGQ 172 >UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Tax=Bacteria RepID=RNFE_PSEA7 Length = 239 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 6/163 (3%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 + + NN LV+ LGLCP +G S A+G+GLAT V+ ++ L+ + Sbjct: 8 EIARDGLWRNNPGLVQLLGLCPLLGTSNSTVNALGLGLATLLVLVCSNAAVSLVRGAVS- 66 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 +R AF+++IA + E++++ + LY++LGIF+PLITTNC +LG A Sbjct: 67 ----EAIRLPAFVMIIAALTTCIELLMQAWTYELYQILGIFIPLITTNCVILGRAEAFAA 122 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFR 168 + L+++ G +GF+LV+++ +RE L + A + Sbjct: 123 -KNGVLRASFDGLLTGLGFALVLLVLGGLRELLGQGTLLADMQ 164 >UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA n=1 Tax=Actinobacillus pleuropneumoniae serovar 1 str. 4074 RepID=UPI0000397FA3 Length = 181 Score = 112 bits (281), Expect = 5e-24, Method: Composition-based stats. Identities = 102/140 (72%), Positives = 125/140 (89%) Query: 38 AMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSP 97 A+GMG+ATTFV+T+AS+ A+L++T++LIPL +LRTL FILVIAV+VQ TEM+V KTSP Sbjct: 1 AIGMGMATTFVLTVASLSAYLVETYVLIPLEAQFLRTLVFILVIAVIVQLTEMIVHKTSP 60 Query: 98 VLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRER 157 LYRLLGI+LPLITTNCAVLGVALLN+NL +N ++S LYGF AA+GFSLV+VLFAA+RER Sbjct: 61 TLYRLLGIYLPLITTNCAVLGVALLNVNLSNNLVESVLYGFGAALGFSLVLVLFAALRER 120 Query: 158 LAVADVPAPFRGNAIALITA 177 LA ADVP PF+G +IALITA Sbjct: 121 LAAADVPRPFQGASIALITA 140 >UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3 Tax=Rhodocyclaceae RepID=Q5P1B5_AZOSE Length = 232 Score = 112 bits (281), Expect = 6e-24, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 11/177 (6%) Query: 10 GTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNL 69 + N LV+ LGLCP + VS + A+ +GLAT VM +++ + +I Sbjct: 12 NGLWKQNTGLVQLLGLCPILAVSTSVVNAVSLGLATVVVMAVSNFAVASLRNFI-----P 66 Query: 70 IYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHN 129 +R FIL+IA + ++ LY +LGIF+PLI TNC VL ++ Sbjct: 67 YEIRIPVFILIIAALTTVVDLAFNAYLHDLYLVLGIFIPLIVTNCIVLARVEAYAA-KND 125 Query: 130 FLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMG 186 + S + G +G ++ + IRE + + F G I ++ GL L+ G Sbjct: 126 PVASTVDGIMMGLGLVWLLGVLGGIRELVGSGTL---FSG--IEMVIPGLSPLSVFG 177 >UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase subunit D n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU8_ACHLI Length = 219 Score = 111 bits (279), Expect = 9e-24, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 85/160 (53%), Gaps = 6/160 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + L+ + N ++V LG+C + V+ ++E A+ MG+ TFV+ +S+ ++ Sbjct: 20 KKWFLILKNGISEENPIIVSVLGICSALAVTNRVENAIVMGIGVTFVIMASSMMVSMMRN 79 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 I +R +AF+++I++ +M ++ PV+ LG + LI TNC V+G A Sbjct: 80 LI-----PSKVRMVAFMVIISMFTIVVQMFLQAFLPVVAANLGAYTGLIITNCIVMGRAE 134 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + + + + GF+ +G++LV++ AA+RE LA Sbjct: 135 A-FAIKNPVKYTIIDGFANGMGYTLVLIAIAAVREPLAFG 173 >UniRef50_Q4K757 Membrane protein, putative n=2 Tax=Pseudomonas fluorescens RepID=Q4K757_PSEF5 Length = 193 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 4/194 (2%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGV--SKKLETAMGMGLATTFVMTLASICAWL 58 MTD+LL V T L+NNFVL LG+ P + +GLATT +M ++ + Sbjct: 1 MTDFLLALVSTALINNFVLQWPLGVDPLLQAPADGARLRIHALGLATTALMLVSCALGHV 60 Query: 59 IDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLG 118 + +L+P L L+ A++ + +++ + + P L G++ PL+ N +LG Sbjct: 61 LYRGVLVPSGLQSLQLFAWLSLSVLLIGPALHWLPRALPSL-PFDGLW-PLLLANAGMLG 118 Query: 119 VALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAG 178 + L+ A +GF LV+ LF +R+R++ D+P P++G I LI+AG Sbjct: 119 LLLIASGENLGLATLGAMSLGAGLGFWLVLSLFNDLRQRISTNDIPLPWQGLPIDLISAG 178 Query: 179 LMSLAFMGFSGLVK 192 L+++AF GF+GL+K Sbjct: 179 LLAVAFFGFNGLLK 192 >UniRef50_B0P6D2 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D2_9FIRM Length = 203 Score = 109 bits (272), Expect = 7e-23, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 5/194 (2%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 ++++L+ ++ N V + LG K + G +++TL++ AW ++ Sbjct: 5 ISEFLIAAFTAAILQNAVFARGLGASGETLALNKPRGILRFGAFVIYIVTLSAALAWPLN 64 Query: 61 TWILI-----PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCA 115 + + L + YL ++ +L I +V T V R P L+ L N A Sbjct: 65 YLLRLYRLSSRLGIRYLSSITTLLCICLVFALTYAVTRAWLPRLHYALRPLALPAALNTA 124 Query: 116 VLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALI 175 VLG LL + G+ +L++ + F + G++L ++L + R+R+A++DVP FRG +ALI Sbjct: 125 VLGAILLAFSSGYGYLKTCGFAFGSGAGYTLALLLISEGRKRIALSDVPRAFRGLPVALI 184 Query: 176 TAGLMSLAFMGFSG 189 G++SLA G G Sbjct: 185 YIGILSLAIYGLIG 198 >UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN4_9BACE Length = 193 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 78/154 (50%) Query: 36 ETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKT 95 +A+ MGL T +T + + W++ ++L P YL F+L+ A + ++ K Sbjct: 36 RSALAMGLTVTVGLTASMLLCWVVYAFLLSPFGAEYLEEAFFLLLTAGLAWLANRLMTKF 95 Query: 96 SPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIR 155 P L LP+ NCAVLG A+L + G + +GF++ ++F ++ Sbjct: 96 LPGKAEHLRQSLPMAAINCAVLGGAMLVSRSEVGLAPALRSGLLSGIGFTVAALVFVSVW 155 Query: 156 ERLAVADVPAPFRGNAIALITAGLMSLAFMGFSG 189 ER++ A VP F G IA+ AGL+ L +GF+G Sbjct: 156 ERVSYARVPKSFSGFPIAMAAAGLVLLTLLGFTG 189 >UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subunit D n=3 Tax=Deltaproteobacteria RepID=Q2LXT9_SYNAS Length = 214 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 6/158 (3%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 L +L+ N + L +CP +G++ ++ + +G A FV +S I +I Sbjct: 17 ELLFNGILLENPIFRLALSMCPAVGLTTSIKNGLLLGTAVLFVQVFSSCTIAAIKNFIHP 76 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 +R + L IA V ++V+ P Y+ +G+F+ LI + L Sbjct: 77 R-----IRIPTYTLTIATWVTVIDLVLAAYVPEAYKQVGLFVKLIVAFAIITMR-LEMFA 130 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + S G +GF + MV +RE L + Sbjct: 131 CKNTVTSSFFDGVGMGIGFMVGMVTIGFVRELLGAGTL 168 >UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MZD9_HAEIN Length = 128 Score = 102 bits (255), Expect = 7e-21, Method: Composition-based stats. Identities = 73/108 (67%), Positives = 87/108 (80%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT Y+LL +GT L+NNFVLVKFLGLCPFMGVSKK+ETA+GMGLAT FV+T+AS+CA+L+D Sbjct: 1 MTHYILLIIGTALINNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVD 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLP 108 +ILIPLN +LRTL FILVIAVVVQFTEM + K + FL Sbjct: 61 HYILIPLNATFLRTLVFILVIAVVVQFTEMAINKNKSNIISFTRHFLA 108 >UniRef50_B6G8I2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G8I2_9ACTN Length = 198 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 5/192 (2%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 +L L NN V + +G+ + V+ + + + G +A W + T + Sbjct: 3 FLNALFTAALDNNLVFAQLIGMVSVVLVAGRPQDSFRFGAMIAVATAVAGAPGWPLYTQL 62 Query: 64 LIPLNLIYLRTLAFILV--IAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 + P + YL LA++LV +VV T + K+ RLL + P++ N AVL V+L Sbjct: 63 MQPWGVAYLAPLAYVLVSWAVIVVVATILGAGKSVAERERLLRV-CPIVACNAAVLAVSL 121 Query: 122 LNINLGHNFLQSALYG--FSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGL 179 N + A G A +G L +VLFA +R+R+ VPA RG I L+TA L Sbjct: 122 GNAAVADTLTWDAALGSSIGAGLGVLLAVVLFAFVRDRIDERLVPAALRGLPITLVTASL 181 Query: 180 MSLAFMGFSGLV 191 M+LAF G +G+ Sbjct: 182 MALAFTGVAGIA 193 >UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE35_9CLOT Length = 205 Score = 98.7 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 88/186 (47%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 + + + + + N V + LG + + +K + G+ T + +AS+ A+ I+ + Sbjct: 15 FFSMLILAIFLENTVFTRALGTSTVLLMLRKKANLLLFGVVLTLITVIASVLAFWINPLL 74 Query: 64 LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 N Y+ + ++L+I++V +VV++ L L + L NCAV G LL Sbjct: 75 ADFPNKYYVTPIVYVLIISLVYVVALIVVKRLLKRLAEELVPMIHLSAFNCAVFGALLLA 134 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLA 183 + + +G + +GF+L ++ A L ++P FRG I +I G++SLA Sbjct: 135 NSYKMTLASTIGFGLGSGLGFTLAALMLAISYNYLNSDNIPKAFRGFPITMIYVGILSLA 194 Query: 184 FMGFSG 189 F G G Sbjct: 195 FYGLIG 200 >UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subunit D n=15 Tax=Chlamydiales RepID=NQRD_CHLTA Length = 213 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 YL F + +NN L+ LG+C + V+ + TA+ MG A +FV +S L+ Sbjct: 5 KSYLTYFTDALWINNQPLIAILGICSALAVTTTVTTALTMGFAVSFVTGCSSFVVSLLRK 64 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 + +R +A +++I++ V + ++ + + L +F+ LI TNC V+G A Sbjct: 65 -----ITPESVRMIAQLIIISLFVILIDQFLKAFFFTISKTLSVFVGLIITNCIVMGRAE 119 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 ++ + + + L G + +G+ V+V + IRE + Sbjct: 120 -SMARHVSPIPAFLDGLGSGLGYGWVLVCISIIRELFGFGTI 160 >UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AE2 Length = 156 Score = 96.4 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 49/91 (53%), Positives = 68/91 (74%), Gaps = 1/91 (1%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ VL NNFVL FLGLCPF+GVS KL+TA+ MGLAT FVM ++S+CA+ I+ IL+ Sbjct: 9 IFLNAVLANNFVLALFLGLCPFLGVSGKLDTALPMGLATMFVMLVSSVCAFAINQ-ILVT 67 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSP 97 ++ +LR +A+I VIA VQ EM ++K +P Sbjct: 68 FDIEFLRLIAYIAVIASAVQLVEMTLKKFTP 98 >UniRef50_A8S6D2 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D2_9FIRM Length = 203 Score = 96.4 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 8/191 (4%) Query: 4 YLLLFVGTVLVNNFVLVKFLG---LCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 + + + N V + LG + +G + GM L T V+ + A+L Sbjct: 11 FFSYALLAIFAQNAVFTRALGVSRMVQLVGDDRTSSALFGMMLCITQVLV--APVAFLAG 68 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVR--KTSPVLYRLLGIFLPLITTNCAVLG 118 +I N LR L +I IAVV +V+ ++ P +LL I +PL N VLG Sbjct: 69 RFIAPLDNRAQLRPLVYIASIAVVCLAEHLVLWLLRSLPRRAQLLRI-VPLAALNSGVLG 127 Query: 119 VALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAG 178 L+ QS +G + +G+ L ++L R RL +P FRG I L+ G Sbjct: 128 TVLVERTQSFTLGQSLGFGLGSGLGYVLAVLLVTEARHRLRSKAIPKAFRGLPITLVYIG 187 Query: 179 LMSLAFMGFSG 189 +++LA GF+G Sbjct: 188 VLALAVYGFTG 198 >UniRef50_A5VZI7 NADH:ubiquinone oxidoreductase subunit RnfA-like protein n=5 Tax=Pseudomonas RepID=A5VZI7_PSEP1 Length = 182 Score = 91.8 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 11/190 (5%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M DY+L+ + L+N+ L++ P G+ ++ GLA + L I A L+ Sbjct: 1 MNDYILVLISAALINHLCLLRQ----PLSGLQLQVH-----GLACALCIALGVIGAQLLV 51 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +L PL + L + +A++ ++ K P + ++G+ L+ +N VLG+A Sbjct: 52 HAVLAPLQIHDLALFLLLPWLALLAWGLPWLLAKWRPA-WPVVGL-PALLLSNAVVLGLA 109 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 L + + L G GF L +++FA +R+R A AD+P RG I LI AG+M Sbjct: 110 LQQTSDDGTWPTMLLQGLLTGGGFWLALMVFADLRQRSAHADIPNALRGLPIELIGAGVM 169 Query: 181 SLAFMGFSGL 190 ++A GF+G+ Sbjct: 170 AMALSGFNGM 179 >UniRef50_D1PJN2 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN2_9FIRM Length = 217 Score = 81.8 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 9/196 (4%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFM-GVSKKLETAMGMGLATTFVMTLASICAW---- 57 D++ + N +L + LG+ + V L VMT+++ W Sbjct: 17 DFISYMGLAIFAENVILARALGVTRLLKLVPDHKAQVWDFSLPFILVMTISAPMGWAVHN 76 Query: 58 ----LIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTN 113 + ++ L + LR L ++ +V + T +++ + L L + Sbjct: 77 MLFPWLRNYLPAWLPVSALRPLIYLSCASVAMILTWLLLFVLPRRQRQACHAQLTLGGCS 136 Query: 114 CAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIA 173 AVLG L+ N + +QS +G +A+G+ ++ + R RL DVP+ F+G + Sbjct: 137 TAVLGTLLICANQNYTMMQSIAFGLGSALGYVFIIFIVREGRRRLRSKDVPSIFQGLPSS 196 Query: 174 LITAGLMSLAFMGFSG 189 LI G++SLA G G Sbjct: 197 LIYIGVLSLAIYGLVG 212 >UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C280_9GAMM Length = 94 Score = 77.6 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 2/93 (2%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + L +F+ +LVNNFV FLGLCPF GVS KLETA +GLA+TFVM + +IC W ++T Sbjct: 3 SQLLWIFISALLVNNFVFSYFLGLCPFFGVSGKLETAFRLGLASTFVMLITAICTWFLNT 62 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRK 94 +ILI YLR ++FI+VIA VQF EMV++K Sbjct: 63 YILI--YAPYLRLISFIVVIASTVQFVEMVIKK 93 >UniRef50_D1PJN1 Putative electron transport complex protein RnfE n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN1_9FIRM Length = 405 Score = 70.6 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 67/152 (44%), Gaps = 7/152 (4%) Query: 12 VLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIY 71 + ++N V+V LGL P +G + E A+ + +A+ ++T + A + L+ Sbjct: 206 IWLSNPVMVCGLGLAPVVGAALDGERALILCVASLLLITFTRVLAVAVCH-----LSGNR 260 Query: 72 LRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFL 131 R + + A++ +++ + LGI+LP++ A++ Sbjct: 261 FRPIIYSYAAALLYIPVYILLYEFFGNSLTALGIYLPILVVEPAIVKRME--FAELEPLR 318 Query: 132 QSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + +GF+ +G + +++ +RE LA V Sbjct: 319 DALRHGFNNGIGMCVALLIVGCLREFLASGTV 350 >UniRef50_D1NHP2 Electron transport complex protein rnfA n=1 Tax=Haemophilus influenzae HK1212 RepID=D1NHP2_HAEIN Length = 91 Score = 68.7 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 48/67 (71%), Positives = 58/67 (86%) Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFM 185 + N +S +YGF A++GFSLV+VLFAA+RERL AD+PA FRG+AIALITAGLMSLAFM Sbjct: 25 MADNLTESVVYGFGASLGFSLVLVLFAALRERLVTADIPATFRGSAIALITAGLMSLAFM 84 Query: 186 GFSGLVK 192 GF+GLVK Sbjct: 85 GFTGLVK 91 >UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN3_9BACE Length = 240 Score = 68.3 bits (166), Expect = 1e-10, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 6/159 (3%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 + LF + ++N ++ L + + S L +G GLA T V+ ++ ++ Sbjct: 43 VSLFRRGLALHNPAVILLLLVAAVLPCSATLPGGLGTGLAMTAVLVCTNLAGAILR---- 98 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNI 124 P+ LR +++ A ++ +V++ P L +FL N A+L Sbjct: 99 -PIASPALRIPCYLIAAAAILTAAGLVLQACFPGLTGCAPLFLLPAAVNAALLAR-RGAF 156 Query: 125 NLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + +A+ G +A VGF++ + + +A+RE L + Sbjct: 157 SRRFTPGYAAVDGLAAGVGFTIALTVLSALRELLGKGTL 195 >UniRef50_UPI0001C372EF hypothetical protein RflaF_11025 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EF Length = 191 Score = 67.5 bits (164), Expect = 2e-10, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 71/184 (38%), Gaps = 7/184 (3%) Query: 11 TVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLI 70 +L N +L + LG + + + T T+AS + +D ++ + + Sbjct: 9 ALLAANLILTQALGTSTMFIAASGRKNLVRTACVITLFTTVASAFTYFVDVFMPDSVRV- 67 Query: 71 YLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG--- 127 Y + + L+I V+ V+ + ++ + NCAV+G Sbjct: 68 YATLICYTLIIGVLYALFLTVLYLFGREKFEAYKKYIHISAFNCAVMGTLFTISERAAAD 127 Query: 128 ---HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAF 184 N + L G A VGF + + AA +L VPA FRG LI G++S+A Sbjct: 128 PSLRNTVTYFLNGLEAGVGFIIASLFLAAAFRKLNSEKVPASFRGYPAMLIYLGIISMAV 187 Query: 185 MGFS 188 Sbjct: 188 YALK 191 >UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP92_9FIRM Length = 256 Score = 56.8 bits (136), Expect = 4e-07, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 15/189 (7%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 + + N VL+ + P + + + + + LA + L + + I Sbjct: 23 LIDGLAKQNVVLMTGIVNAPVIIAATTFKKGVVIALAFAIISFLTIVTCSFVPKKI---- 78 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 + LR + + LV +V T +++ + P+ L+GI++PLI TN + Sbjct: 79 -VYTLRVIIYALVGSVYYIPTVLLLEQIFPLTVELIGIYMPLIITNALIFSKTESRF-YL 136 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVP---------APFRGNAIALITAG 178 + L+ + GF V VL RE + A F I G Sbjct: 137 EDKLKMIIDVIFFIAGFGAVCVLTGGFRELICFGTFAGIKLFDFKIAAFESPFGGFILVG 196 Query: 179 LMSLAFMGF 187 +M+ F Sbjct: 197 IMAGMFRAL 205 >UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE36_9CLOT Length = 203 Score = 50.6 bits (120), Expect = 3e-05, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 10/187 (5%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 ++ + +L N VL + L + P + ++ L+ A + LA + + + A I Sbjct: 4 KHLIVEKLKDLLYANMVLERGLLVAPVVVMAYNLKNAAALALAFAIITFVTVVFASFIPK 63 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 I +R + ++V A++ + V + P L LGIFLPL+ TN V+ + Sbjct: 64 KI-----PYAVRVIFNVVVAALMFIPAALAVDQIQPGLVYKLGIFLPLLITNSLVIQKSE 118 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAI-ALITAGLM 180 + +GF++V+ L A+RE A G AI + TA + Sbjct: 119 TRFRKIPTKRGMIIDLIGHIIGFAIVICLVGALRELFGSA----TLWGKAIGSFQTAPAL 174 Query: 181 SLAFMGF 187 L F GF Sbjct: 175 LLPFSGF 181 >UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D1_9FIRM Length = 241 Score = 49.1 bits (116), Expect = 9e-05, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 66/161 (40%), Gaps = 12/161 (7%) Query: 12 VLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLI- 70 V +NN V+++ +GL P + V+ + + + A T ++ + + A L+ + + Sbjct: 22 VFLNNPVVMQGMGLAPLVVVATTGQNGLMLAAAVTLLLVPSRVLACLLSRLVPLRDEEPT 81 Query: 71 --------YLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 R L + AVV ++ LGI+LP++ + Sbjct: 82 PEQLQKKLLPRALLYAASAAVVYLAAYPILNFVFGTGLLNLGIYLPMLVVEPLLTYR--- 138 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + ++ G VG++L++++ +RE L++ V Sbjct: 139 FGRVQETVHKAVSKGVRITVGYALLLLVVGVVREWLSLGTV 179 >UniRef50_B0P6D1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D1_9FIRM Length = 191 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 64/147 (43%), Gaps = 8/147 (5%) Query: 35 LETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRK 94 + T++ ++ + ++ + + L+ + L L + +A++V +++ Sbjct: 9 ITTSLKNSVSISILLACSLVPTVLLASLAGARLPRWGAPILYTLFSLALIVACVPLILP- 67 Query: 95 TSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAI 154 SP + LGIF+PL++ N +L + + + + + S + GF+L+M L A + Sbjct: 68 ISPEVADSLGIFVPLLSVNTLLLTLCGRYADSRRKPVFALVDAVSYSAGFALIMCLLALL 127 Query: 155 RERLAVADV-------PAPFRGNAIAL 174 RE L ++ P G I Sbjct: 128 REWLGTGNIWGVPVRAPFTLSGIQITF 154 >UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EE Length = 204 Score = 44.4 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 70/193 (36%), Gaps = 22/193 (11%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + +L +N +L + + P + ++ A+ + A + ++ I + Sbjct: 1 MNNRKNSVFDGILGDNIILSSLMVISPIIICGDSVKNALSLIYAFNSMTFISLIIGSFV- 59 Query: 61 TWILIPLNLIYLRTLAFILVIAVVV-QFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGV 119 P + Y + +I+ +V + P +GI+ PL+ N ++ Sbjct: 60 -----PKKIPYTIRIIIYAIISSLVFIPVRWFAVEFYPDSIHRIGIYYPLLAVNSLIVLQ 114 Query: 120 ALLNINL--GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAV-------ADVPAPFRGN 170 + + S ++ +GF LVM+ A+RE A AD+ G Sbjct: 115 SEAKFYRMKKGRMIISLVFYI---IGFDLVMLFTGAVREFFAYGTILSKVADINTTVSGL 171 Query: 171 AI---ALITAGLM 180 + I GLM Sbjct: 172 GMPFGGFIFLGLM 184 >UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W6_NATTJ Length = 86 Score = 42.1 bits (98), Expect = 0.009, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 33/102 (32%) Query: 90 MVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMV 149 M++ SP L + GIF+PLI TNC +L + + + +V Sbjct: 1 MLLEAYSPALQKSRGIFVPLIVTNCLILERSEAFASKKKSVHL---------------LV 45 Query: 150 LFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGLV 191 + A++ I AG++S+AF GF G++ Sbjct: 46 MLASV------------------PFIIAGVLSIAFTGFLGVI 69 >UniRef50_UPI000150A5D9 ABC transporter family protein n=1 Tax=Tetrahymena thermophila RepID=UPI000150A5D9 Length = 1313 Score = 41.7 bits (97), Expect = 0.013, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Query: 46 TFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGI 105 F++T A++ + + + L F+ ++ V F M + + ++ L I Sbjct: 807 IFLLTFATMASSFLYGRMFSTFYEAVLGLPMFMFLVIFWVMFILMFMATATQDIWSLFQI 866 Query: 106 FLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVG 143 F PL+++ C V+ L+ + S + + G Sbjct: 867 F-PLVSSPCVVIFTGLITFLYKDGSVISNNFWLGQSTG 903 >UniRef50_B6G8I1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G8I1_9ACTN Length = 220 Score = 40.6 bits (94), Expect = 0.033, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 5/147 (3%) Query: 17 FVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLA 76 + G P + V+ E + +GL T + L + A L+ + + R Sbjct: 22 PTFLVVAGALPGLFVATSFENGLMIGLVTAAAIVLMASLAPLLRCFTSMWS-----RVPV 76 Query: 77 FILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALY 136 ++V VR +PV++ LGI+LPL+ N V + + Sbjct: 77 MLMVSVTAATLLGFAVRVANPVVFESLGIYLPLVAVNALVAAWIASDGLTVAPAKTPLMT 136 Query: 137 GFSAAVGFSLVMVLFAAIRERLAVADV 163 AA + I L V Sbjct: 137 AMFAAAMVLAALTFVGFINGMLTTGQV 163 >UniRef50_B0D6J2 Predicted protein n=2 Tax=Laccaria bicolor S238N-H82 RepID=B0D6J2_LACBS Length = 769 Score = 40.2 bits (93), Expect = 0.036, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 14/149 (9%) Query: 38 AMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSP 97 A+ MG ++T+ +++ D +L +N I IA ++ M + Sbjct: 583 ALAMGATFIALLTMYFPASYMEDYAVLHDVNPHLAFYALAITHIASLMGRIVMGLLA--- 639 Query: 98 VLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRER 157 Y + +P A L + ++ + S YGFS+ SL++ A++ Sbjct: 640 DKYGSFTLLIPTTVVLAASLCTVVSVQSVKAIVIVSIFYGFSSGAWLSLLICGLASL--- 696 Query: 158 LAVADVPAPFRGNAIALITAGLMSLAFMG 186 R I L T ++S+A +G Sbjct: 697 --------ALRPTEIGLRTGLVLSVASLG 717 >UniRef50_A6RQM7 Putative uncharacterized protein n=2 Tax=Botryotinia fuckeliana B05.10 RepID=A6RQM7_BOTFB Length = 558 Score = 39.0 bits (90), Expect = 0.078, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 16/165 (9%) Query: 31 VSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEM 90 V K L + +GL TF S+ + + W+ P +L + F + + Sbjct: 229 VRKSLMNGVLIGLWYTF-----SLSISIYNKWMFDPKHLNF-HFPLFTTSMCKSSALAFV 282 Query: 91 VVRKTSPVL----YRLLGI-FLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFS 145 ++ L +RL+GI F I V G + F+ F + GF Sbjct: 283 LLFAFVFRLETPSWRLVGIIFTMTIGVVMMVFGEVDFST---KGFVLVIFAAFFS--GFR 337 Query: 146 LVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGL 190 + +R + F I ++ +++ GFSGL Sbjct: 338 WGLTQILLLRNPATSNPFSSIFYLAPIMFVSLLVIATPVEGFSGL 382 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax... 176 3e-43 UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subun... 173 3e-42 UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Ta... 172 6e-42 UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax... 171 1e-41 UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax... 169 4e-41 UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A su... 168 7e-41 UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subu... 168 9e-41 UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A su... 167 2e-40 UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A su... 163 4e-39 UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A su... 162 7e-39 UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subun... 161 8e-39 UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 159 3e-38 UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase,... 158 8e-38 UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E su... 158 8e-38 UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subun... 156 5e-37 UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 154 2e-36 UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E su... 153 2e-36 UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A su... 153 4e-36 UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clos... 152 7e-36 UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E su... 151 9e-36 UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteo... 151 2e-35 UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 150 3e-35 UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A su... 149 5e-35 UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E su... 149 5e-35 UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E su... 149 5e-35 UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E su... 149 6e-35 UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subun... 147 2e-34 UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desu... 147 2e-34 UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bac... 146 3e-34 UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E su... 146 3e-34 UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E su... 146 3e-34 UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 146 4e-34 UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax... 146 5e-34 UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Ta... 146 5e-34 UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E su... 145 6e-34 UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E su... 144 1e-33 UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E su... 144 2e-33 UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase ... 143 3e-33 UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=... 143 4e-33 UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E su... 142 5e-33 UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subun... 142 5e-33 UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax... 142 6e-33 UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E su... 142 7e-33 UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subun... 141 2e-32 UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D su... 140 3e-32 UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:qui... 139 3e-32 UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E su... 139 4e-32 UniRef50_Q0VP36 Electron transport complex protein rnfE, putativ... 139 5e-32 UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E su... 139 7e-32 UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=... 138 1e-31 UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subun... 138 1e-31 UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E su... 135 8e-31 UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-lik... 134 2e-30 UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachy... 134 2e-30 UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 132 6e-30 UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=... 129 3e-29 UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=... 128 8e-29 UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax... 128 8e-29 UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=... 128 1e-28 UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4... 127 2e-28 UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=... 127 3e-28 UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E su... 126 3e-28 UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subun... 125 7e-28 UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaprote... 125 8e-28 UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacte... 125 9e-28 UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subun... 122 4e-27 UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subun... 121 1e-26 UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desu... 121 1e-26 UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E su... 121 2e-26 UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3... 121 2e-26 UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Ta... 120 2e-26 UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 119 5e-26 UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase ... 116 4e-25 UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone redu... 112 4e-24 UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subu... 112 8e-24 UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subun... 110 3e-23 UniRef50_D1PJN1 Putative electron transport complex protein RnfE... 108 8e-23 UniRef50_Q4K757 Membrane protein, putative n=2 Tax=Pseudomonas f... 107 2e-22 UniRef50_B0P6D2 Putative uncharacterized protein n=1 Tax=Anaerot... 107 2e-22 UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidor... 106 3e-22 UniRef50_D1PJN2 Putative uncharacterized protein n=1 Tax=Subdoli... 106 3e-22 UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostri... 106 5e-22 UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bactero... 101 9e-21 UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacte... 101 2e-20 UniRef50_B6G8I2 Putative uncharacterized protein n=2 Tax=Collins... 99 7e-20 UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE typ... 97 3e-19 UniRef50_A8S6D2 Putative uncharacterized protein n=2 Tax=Faecali... 96 6e-19 UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subun... 96 6e-19 UniRef50_UPI0001C372EF hypothetical protein RflaF_11025 n=1 Tax=... 93 5e-18 UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 T... 93 6e-18 UniRef50_A5VZI7 NADH:ubiquinone oxidoreductase subunit RnfA-like... 88 2e-16 UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostri... 87 3e-16 UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bactero... 84 3e-15 UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecali... 81 2e-14 UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Begg... 74 3e-12 UniRef50_B0P6D1 Putative uncharacterized protein n=1 Tax=Anaerot... 71 2e-11 UniRef50_D1NHP2 Electron transport complex protein rnfA n=1 Tax=... 66 9e-10 Sequences not found previously or not previously below threshold: UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE typ... 62 9e-09 UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natran... 42 0.007 UniRef50_UPI000150A5D9 ABC transporter family protein n=1 Tax=Te... 42 0.011 UniRef50_B6G8I1 Putative uncharacterized protein n=2 Tax=Collins... 41 0.017 UniRef50_A6RHE5 Predicted protein n=15 Tax=Ajellomyces capsulatu... 40 0.037 UniRef50_B0D6J2 Predicted protein n=2 Tax=Laccaria bicolor S238N... 40 0.056 >UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax=Gammaproteobacteria RepID=RNFA_SODGM Length = 193 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 168/193 (87%), Positives = 185/193 (95%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M YL+LF+GTVLVNNFVLVKFLGLCPFMGVSKK+ETA+GMG+ATTFVMTLASICAWLI+ Sbjct: 1 MNGYLMLFIGTVLVNNFVLVKFLGLCPFMGVSKKVETALGMGMATTFVMTLASICAWLIN 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +IL+PLN+ YLRTLAFI +IAVVVQFTE+VVRKTSP LYRLLGIFLPLITTNCAVLGVA Sbjct: 61 DFILLPLNIPYLRTLAFIFIIAVVVQFTELVVRKTSPALYRLLGIFLPLITTNCAVLGVA 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LLN+N HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPF+G++IALITAGLM Sbjct: 121 LLNVNENHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFKGSSIALITAGLM 180 Query: 181 SLAFMGFSGLVKL 193 SLAFMGF+GLVK+ Sbjct: 181 SLAFMGFTGLVKV 193 >UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subunit E n=3 Tax=Bacteria RepID=A6DRQ4_9BACT Length = 245 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 125/201 (62%), Gaps = 14/201 (6%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 L L + + + N + FLG+C ++ VSKK++T++GMG A FV T+ +WL+ + Sbjct: 1 MLELALKAIFIENMIFALFLGMCSYLAVSKKVDTSVGMGCAVWFVTTVTCPASWLVSNYF 60 Query: 64 LIP--------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPL 109 L P L+L +L +++I +IA +VQF EM + K S LY LG+FLPL Sbjct: 61 LKPGEQNLIGQLFNKPDLDLTFLTFVSYIALIAAMVQFLEMFIEKISAKLYGSLGVFLPL 120 Query: 110 ITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRG 169 I NCA+LG +L+ + G F ++A++GFS G+ + +V+FAAIRE++ ++VP RG Sbjct: 121 IAVNCAILGGSLMMNDKGFTFPEAAMFGFSGGFGWLMAIVVFAAIREKMQYSNVPKGMRG 180 Query: 170 NAIALITAGLMSLAFMGFSGL 190 IA +T GLM++AFMGF G+ Sbjct: 181 LGIAFLTCGLMAMAFMGFMGI 201 >UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Tax=Bacteria RepID=RNFA_YERP3 Length = 193 Score = 172 bits (436), Expect = 6e-42, Method: Composition-based stats. Identities = 170/192 (88%), Positives = 187/192 (97%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETA+GMGLATTFV+TLAS+CAW+++ Sbjct: 1 MTEYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAWMVN 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++IL+PL LIYLRTLAFILVIAVVVQFTE+VVRKTSP LYRLLGIFLPLITTNCAVLGVA Sbjct: 61 SFILLPLGLIYLRTLAFILVIAVVVQFTELVVRKTSPTLYRLLGIFLPLITTNCAVLGVA 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LLN+N HNF+QSA+YGFSAA GFSLVMVLFAAIRERLAVADVPAPFRG++IALITAGLM Sbjct: 121 LLNVNQSHNFMQSAVYGFSAAAGFSLVMVLFAAIRERLAVADVPAPFRGSSIALITAGLM 180 Query: 181 SLAFMGFSGLVK 192 SLAFMGF+GLVK Sbjct: 181 SLAFMGFTGLVK 192 >UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax=Bacteria RepID=RNFA_PSEA8 Length = 194 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 137/193 (70%), Positives = 168/193 (87%), Gaps = 1/193 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+ L+ V +LVNNFVLV+FLGLCPFMGVS+K+ETA+G+ LATTFV+TLA++C+ ++ Sbjct: 1 MTELALILVSAILVNNFVLVQFLGLCPFMGVSRKIETAIGLSLATTFVLTLAAMCSHILQ 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L PL+L YLRT+ FILVIAVVVQFTEM+V+KTSP+LYR+LGIFLPLITTNC VLGVA Sbjct: 61 RYVLRPLDLEYLRTIGFILVIAVVVQFTEMLVKKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 121 LLNINL-GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGL 179 LLN N + FLQ+ GF A +GFSLV+VLFAA+RER+A+ADVPAPFRG AI +ITAGL Sbjct: 121 LLNANKAEYGFLQATTQGFGAGLGFSLVLVLFAALRERIAIADVPAPFRGAAIGMITAGL 180 Query: 180 MSLAFMGFSGLVK 192 MSLAFMGFSGLV+ Sbjct: 181 MSLAFMGFSGLVR 193 >UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax=Bacteria RepID=RNFA_AZOVD Length = 194 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 139/193 (72%), Positives = 172/193 (89%), Gaps = 1/193 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+ +L+ VG +LVNNFVLV+FLGLCPFMGVSK++ETA+G+ LATTFV+TLA++C++L+ Sbjct: 1 MTELVLILVGAILVNNFVLVQFLGLCPFMGVSKRIETAIGLALATTFVLTLAAMCSYLLQ 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L+PL+L YLRT+ FILVIAVVVQFTEM+V KTSP+LYR+LGIFLPLITTNC VLGVA Sbjct: 61 RYVLVPLDLEYLRTIGFILVIAVVVQFTEMLVNKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 121 LLNINL-GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGL 179 LLN N G+ FL+S + GF A +GFSLV+VLFAA+RER+A+ADVP PF+G AI LITAGL Sbjct: 121 LLNANKAGYGFLESGINGFGAGLGFSLVLVLFAAMRERIAIADVPKPFKGAAIGLITAGL 180 Query: 180 MSLAFMGFSGLVK 192 MSLAFMGFSGL+K Sbjct: 181 MSLAFMGFSGLIK 193 >UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A subunit n=17 Tax=Bacteria RepID=B8CY11_HALOH Length = 197 Score = 168 bits (427), Expect = 7e-41, Method: Composition-based stats. Identities = 113/192 (58%), Positives = 151/192 (78%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 T LL+F+ TVLVNNF+LV+FLG+CPF+GVS+ +ETA MGLATTFVMT+ WLI+T Sbjct: 6 TRILLIFISTVLVNNFILVRFLGICPFLGVSRHVETAFSMGLATTFVMTMTGAATWLINT 65 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 +IL NL +L+ ++FI+VIA +VQF EM ++KTSPVLY+ LGI+LPLITTNCA+LG+AL Sbjct: 66 YILEMFNLPFLQYVSFIIVIASLVQFVEMFIKKTSPVLYKALGIYLPLITTNCAILGLAL 125 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMS 181 L G+NF++S ++G SA VGF+L +VL A +RE L ADVP +G I LI AG+M+ Sbjct: 126 LIPLNGYNFIESIVFGLSAGVGFTLAIVLMAGLRETLEFADVPEALKGVPITLIIAGIMA 185 Query: 182 LAFMGFSGLVKL 193 +AFMGFSG++ + Sbjct: 186 MAFMGFSGMISI 197 >UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subunit E n=3 Tax=Deltaproteobacteria RepID=Q2LXT8_SYNAS Length = 323 Score = 168 bits (426), Expect = 9e-41, Method: Composition-based stats. Identities = 74/188 (39%), Positives = 120/188 (63%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 + +G +L+NN+V K+LGLC F+G S+K +TA+GMG+ T VM ++++ +W + ++ Sbjct: 134 LFSILIGAMLINNYVFTKYLGLCVFIGTSRKKDTAVGMGITFTIVMVVSAMISWFLYQYV 193 Query: 64 LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 L P L YL+ + FI ++++ VQ + V+RK +P L++ G++L L+ NC ++ V L Sbjct: 194 LKPYRLDYLQVVVFIGLVSLTVQAVDTVLRKVNPALFKAFGVYLVLVIANCVIIAVPLTL 253 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLA 183 + +N +S + A GF L + L +A RERL +A+VP FRG IA + GL +LA Sbjct: 254 ASNEYNAFESFMLALGAGGGFLLALFLMSASRERLELANVPPTFRGLPIAFVATGLFALA 313 Query: 184 FMGFSGLV 191 FMGFSG+ Sbjct: 314 FMGFSGMA 321 >UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Acidaminococcus RepID=D2RN92_ACIFE Length = 191 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 79/190 (41%), Positives = 127/190 (66%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + ++ V+N +L +FLG+C F+GVSK + ++GM A +FVM L+++ ++ Sbjct: 1 MHSTFGILFSSIFVSNIILSRFLGMCSFLGVSKNFKNSVGMSAAVSFVMLLSTMLSYACY 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +L+P +L YL+TL FIL IA +VQ EM ++K P L++ +GI+LPLITTNCA+LG+A Sbjct: 61 HLLLVPYHLEYLKTLVFILAIATLVQLVEMFMKKAMPSLHKAMGIYLPLITTNCAILGIA 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 L+N+ ++FL S + ++G+++ ++LF+ IRERL +P + IALITA M Sbjct: 121 LINVESNYSFLDSCVNSIGTSIGYTMAILLFSCIRERLDEKALPKCLQNLPIALITASCM 180 Query: 181 SLAFMGFSGL 190 S++ MG SG+ Sbjct: 181 SISMMGMSGI 190 >UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A subunit n=3 Tax=Bacteria RepID=A8ZY02_DESOH Length = 191 Score = 163 bits (412), Expect = 4e-39, Method: Composition-based stats. Identities = 101/191 (52%), Positives = 141/191 (73%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT+Y+LL + +L+NN +L +FLG CPF+G SKK+ETA+GM +A FV+ +A + W +D Sbjct: 1 MTEYILLAISCILINNILLAQFLGNCPFLGTSKKMETAVGMSMAVVFVLVMAGMITWCVD 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L L+L +LRTLAFILVIA +VQF EM ++K+ P LY LGIFLPLITTNCAV+G Sbjct: 61 VFLLKWLDLEFLRTLAFILVIASLVQFVEMFLKKSIPALYAGLGIFLPLITTNCAVMGAC 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 L+NI +NFLQ+ + FS AVGF L ++LFA +RER+ + VP P + +I L+TAG++ Sbjct: 121 LINIKEEYNFLQALVASFSYAVGFGLALILFAGVRERINLGKVPKPLQDTSIGLVTAGMI 180 Query: 181 SLAFMGFSGLV 191 +LAF F G+ Sbjct: 181 ALAFFAFKGMA 191 >UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Bulleidia extructa W1219 RepID=D2MN21_9FIRM Length = 190 Score = 162 bits (410), Expect = 7e-39, Method: Composition-based stats. Identities = 90/189 (47%), Positives = 135/189 (71%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D L +G + +NN +L KFLG+CPFMGVS KLE+A+GMG+A FV+ +S+ AW I + Sbjct: 2 DLFTLLIGGLFINNIILTKFLGMCPFMGVSTKLESALGMGVAVIFVIFGSSVIAWTIYHY 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L+P ++ Y+ + FIL+IA VQF E+ ++K++P LY+ LGI+LPLITTNCAVL VA Sbjct: 62 VLVPFHIEYMELITFILLIAAFVQFVELFIKKSTPALYKSLGIYLPLITTNCAVLFVAQD 121 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 NI G++ + + + + GF+L++++FA+IR RL D+P F+GN IA+I A +M++ Sbjct: 122 NIAQGYDLVHTMVNSIAIPAGFALMLLIFASIRTRLQQNDIPKAFQGNPIAMICAAIMAV 181 Query: 183 AFMGFSGLV 191 AF +GLV Sbjct: 182 AFSALAGLV 190 >UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subunit E n=40 Tax=Bacteria RepID=NQRE_CHLTA Length = 244 Score = 161 bits (409), Expect = 8e-39, Method: Composition-based stats. Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 12/200 (6%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + L +F+ + N +L FLG+C ++ S +L TA G+G++ V+T+ WL+ + Sbjct: 10 NLLGIFLQATFIQNILLSTFLGMCSYLACSSRLSTANGLGMSVALVLTITGSINWLVHYF 69 Query: 63 ILIP------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLI 110 I P ++L +L + FI+VIA Q E+++ + S LY LGIFLPLI Sbjct: 70 ITKPGALAWLSPALANIDLSFLELIMFIVVIAAFTQILEVLLERFSRNLYLALGIFLPLI 129 Query: 111 TTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGN 170 NCA+LG L I + FL ++ + G+ L +VLFA IRE+LA +DVP RG Sbjct: 130 AVNCAILGGVLFGITRNYPFLPMVVFSLGSGCGWWLAIVLFATIREKLAYSDVPQHLRGT 189 Query: 171 AIALITAGLMSLAFMGFSGL 190 I+ IT GLM++AFMG +G+ Sbjct: 190 GISFITTGLMAMAFMGLTGI 209 >UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A7HKQ4_FERNB Length = 197 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 88/191 (46%), Positives = 135/191 (70%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + +LF ++ +N +L FLG+C F+ +SK ++++ G+GLA T VMT+ + W+I+ + Sbjct: 6 NPFVLFFASIFTSNILLTNFLGMCSFISISKDIKSSNGLGLAVTLVMTITTAINWIIEKY 65 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 ++ PL+L YLR + +I+VIA VVQ EM++ + SP LY +LGIFLPLIT NCA+LGVAL Sbjct: 66 VIAPLDLGYLRYILYIIVIAAVVQVLEMIIDRVSPNLYMVLGIFLPLITVNCAILGVALF 125 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 + FLQS +G + +G+ L +VL AAIR++ A VPAP +G I LIT G+M++ Sbjct: 126 MQLRNYTFLQSVFFGLGSGMGWWLAIVLLAAIRKKTENAPVPAPLKGVGITLITIGIMAM 185 Query: 183 AFMGFSGLVKL 193 AF+GF+G++K+ Sbjct: 186 AFIGFAGMIKV 196 >UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase, electron transport complex protein rnfA n=18 Tax=Bacteria RepID=A6L724_BACV8 Length = 200 Score = 158 bits (401), Expect = 8e-38, Method: Composition-based stats. Identities = 105/190 (55%), Positives = 146/190 (76%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 +Y+L+F+ + VNN VL +FLG+CPF+GVSKK+ETA GMG A FV+T+A+I +LI + Sbjct: 2 EYILIFITAIFVNNIVLSQFLGICPFLGVSKKVETATGMGAAVAFVLTIATIVTYLIQKF 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L L YL+T+AFILVIA +VQ E++++K SP LY+ LG+FLPLITTNC +LGVA+L Sbjct: 62 VLDAFGLEYLQTIAFILVIAALVQMVEIILKKVSPALYQALGVFLPLITTNCCILGVAIL 121 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 I + L +Y FS A+GF+L MVLFA IRE+L++ ++P +G AIAL+TAGL+++ Sbjct: 122 VIQKDFDLLTGVVYAFSTALGFALAMVLFAGIREQLSLVNIPKGMQGMAIALVTAGLLAM 181 Query: 183 AFMGFSGLVK 192 AFMGFSG+ K Sbjct: 182 AFMGFSGVDK 191 >UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E subunit n=26 Tax=Bacteria RepID=A7HK22_FERNB Length = 217 Score = 158 bits (401), Expect = 8e-38, Method: Composition-based stats. Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + F ++ +N V+ LG+CP + + + GMGLA T V+ ++++ I Sbjct: 1 MASKISEFTKGIIKDNPTYVQVLGMCPTLATTTSAKNGFGMGLAATAVLVMSNVVISSIR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 + +R FI VIA V ++++ + L++ LG+F+PLI NC ++G A Sbjct: 61 KTV-----PEKIRIPIFITVIATFVTIVDLLMHAFTYDLWKTLGLFIPLIVVNCIIMGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + H L S L G VGF+L + L +IRE L + Sbjct: 116 EAYAS-KHGVLDSLLDGLGMGVGFTLSLTLLGSIRELLGNGSI 157 >UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subunit d n=3 Tax=Bacteria RepID=B5YE59_DICT6 Length = 195 Score = 156 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 96/192 (50%), Positives = 145/192 (75%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 + +LF+ L+NN V ++FL LCPF+G+S ++ET++GMG A TFVM +AS+ + I Sbjct: 4 IGKLFMLFISASLINNIVFMRFLALCPFVGMSTQIETSIGMGAAVTFVMVMASVVTFFIY 63 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +IL+PLNL++LRT+AFILVIAV+VQ EMV+++ LY+ +GI+LPLITTNCA+LGV Sbjct: 64 YYILVPLNLLFLRTIAFILVIAVLVQLVEMVIKRFLSGLYKAMGIYLPLITTNCAILGVT 123 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LLNIN GHN +++ +Y ++GF++ ++L A+IR+RL+ +D+P ++G I I+AGL+ Sbjct: 124 LLNINYGHNLIEAIVYSLGVSLGFTIALILLASIRDRLSYSDIPEFWKGYPIVFISAGLL 183 Query: 181 SLAFMGFSGLVK 192 +L F+GF GL Sbjct: 184 ALIFLGFQGLAH 195 >UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP2_9FIRM Length = 272 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 10/187 (5%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 L +F ++ N VLV LG CP + + +GMG++T V+T ++I + Sbjct: 2 SKLQIFTKGIIKENPVLVLLLGTCPTLATTTSAINGVGMGVSTLVVLTCSNIAISALKKV 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R +I+VIA V +++++ P L + LG+F+PLI NC +LG A Sbjct: 62 I-----PDKVRIPCYIVVIAGFVTIVQLLLKGYVPTLDKALGLFIPLIVVNCIILGRAE- 115 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 ++ L S L G VGF+L + IRE + G A+ MSL Sbjct: 116 MFASKNSLLDSILDGLGMGVGFTLALGCMGLIREIVGNGT----AFGFALTKSFLTPMSL 171 Query: 183 AFMGFSG 189 M G Sbjct: 172 FMMAPGG 178 >UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMP6_EGGLE Length = 235 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 91/187 (48%), Gaps = 10/187 (5%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 L +F +L+ N L + LGLCP + V+ + +GMG+ATTFV+ + I L+ I Sbjct: 11 LSVFSKGLLIENPTLRQMLGLCPTLAVTTAVTNGIGMGVATTFVLVCSGIVVSLLRNII- 69 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNI 124 +R AFI VIA V MVV P L + LGI+LPLI NC VLG A + Sbjct: 70 ----PTTMRLPAFITVIAGFVTIVMMVVEAYLPDLNQALGIYLPLIVVNCIVLGRAEVFA 125 Query: 125 NLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAF 184 + H +AL G GF+L +VL +AIRE L G I L M++ Sbjct: 126 S-KHPVKDAALDGLGMGAGFTLTLVLMSAIRELLGAGT----LLGFPILLGIVEPMTVFI 180 Query: 185 MGFSGLV 191 M G Sbjct: 181 MPPGGFA 187 >UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A subunit n=30 Tax=Bacteria RepID=C8WMP5_EGGLE Length = 197 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 97/192 (50%), Positives = 135/192 (70%), Gaps = 1/192 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +Y + +LVNN+VLVKFLG+CPF+GVSKKL++A GMG A T VM LA+ W + Sbjct: 1 MAEYAAILFSMILVNNYVLVKFLGICPFLGVSKKLDSAAGMGCAVTVVMVLATAVTWPLQ 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +L L L YL+T+AFILVIAV+VQ E+V+R P L+ LG++LPLITTNCAVLGV Sbjct: 61 Q-LLNALGLGYLQTIAFILVIAVLVQMLEIVIRYFLPALHEALGVYLPLITTNCAVLGVT 119 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 +L ++ G+N+ ++ + A +GF L MVLF+ +R R+ A+ P F+G I LI+A L+ Sbjct: 120 ILAVDEGYNYPEALVAALGAGLGFLLAMVLFSGVRRRVDEAEPPKAFKGMPITLISAALV 179 Query: 181 SLAFMGFSGLVK 192 SL+FM F+G+ Sbjct: 180 SLSFMCFAGVAD 191 >UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW81_CLOB8 Length = 191 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 90/191 (47%), Positives = 141/191 (73%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +Y LF+G +LVNNFVL KF+GLC F GVSK L+ ++GMG+A T V+TL+S+ AW++ Sbjct: 1 MREYFTLFIGALLVNNFVLTKFVGLCIFFGVSKSLDASIGMGMAVTSVITLSSMLAWVVY 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++L+P +L +L T+ F+++IA VQ E++++K +P LY + GI+L LI TNC VL V Sbjct: 61 NFVLLPYHLTFLTTIVFVILIASFVQLLELIIKKQAPTLYSMWGIYLLLIATNCIVLSVP 120 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 LL++ ++F++S ++ + +GF+L +VL A++RE+L ADVP P G +A I AG++ Sbjct: 121 LLSVESNYSFVKSVVFSIGSGMGFALALVLMASLREKLVYADVPKPLEGTGVAFILAGML 180 Query: 181 SLAFMGFSGLV 191 +LAF+GFSG++ Sbjct: 181 ALAFLGFSGMI 191 >UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Proteobacteria RepID=C5BTA2_TERTT Length = 253 Score = 151 bits (383), Expect = 9e-36, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 Y F + NN LV+ LGLCP M V+ +GMG+ATT V+ ++S+ + Sbjct: 28 KRYRDYFSFGIWENNIALVQLLGLCPVMAVTTSATNGLGMGIATTAVLIISSVLVSALRH 87 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 I +R I +IA V ++ + LY++LG+F+ LI TNCA+LG Sbjct: 88 TI-----PAQVRNPVMIAIIAGTVTLVDLAMNAWMHELYKVLGLFIALIVTNCAILGRTE 142 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + + G +GF+ +VL RE L + Sbjct: 143 A-FAMKQPPMAALADGVGMGLGFTWALVLLGGAREILGSGTL 183 >UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteobacteria RepID=D0D1S5_9RHOB Length = 321 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 7/164 (4%) Query: 1 MTD-YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLI 59 M+D Y + + NN V + L CP + V+ +G+GLATT V+ + + L+ Sbjct: 1 MSDIYARIARDGLWDNNVVFGQMLAHCPLLAVTGTATKGLGIGLATTAVLVASGLAVSLL 60 Query: 60 DTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGV 119 IL +R AF+L+IA +V +M + S L+++LG+F+PLI TNCA+LG Sbjct: 61 RGAILP-----GIRIPAFVLLIACIVNVVDMALNAWSHDLHQVLGLFIPLIVTNCAILGR 115 Query: 120 ALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 A + SA G +GF+ +V+ A RE L + Sbjct: 116 AEALASRNRPLA-SAFDGLMMGLGFTAALVVLGAAREILGSGTL 158 >UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=8 Tax=Bacteria RepID=D1PN89_9FIRM Length = 230 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 +F ++ N VL LG C + V+ + A+GMGL+ TFV+ ++I + Sbjct: 6 SKWKVFTAGIIRENPVLRLVLGCCSALAVTTTVSGAVGMGLSMTFVLVCSNIVISALRKV 65 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I + +I++IA V +MV++ P LY+ LG+FL LI NC +LG A Sbjct: 66 I-----PGKVHLPCYIVIIATFVTVVQMVLQAFVPDLYKSLGVFLALIVVNCIILGRAE- 119 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD 162 + + SAL G +G+ L M L ++IRE + Sbjct: 120 MFACKNTVVDSALDGLGMGIGYILTMTLMSSIREIIGSGS 159 >UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Gammaproteobacteria RepID=C5SAZ5_CHRVI Length = 196 Score = 149 bits (377), Expect = 5e-35, Method: Composition-based stats. Identities = 99/180 (55%), Positives = 132/180 (73%), Gaps = 1/180 (0%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 L+F+ +VNNFVL FLG+CPF+GVS K ETA MGLAT FVM ++S A+ I W+L Sbjct: 8 LIFLNAAIVNNFVLALFLGICPFLGVSGKKETAWNMGLATMFVMLVSSAAAYGI-NWLLT 66 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 L L +LR + +I VIA VQ EM V+KTSP L+R LGIFLPLITTNCA+LG+AL + Sbjct: 67 QLGLEFLRLICYIAVIASAVQLVEMFVKKTSPALFRSLGIFLPLITTNCAILGLALFQTS 126 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFM 185 ++F+QS +Y A VGF+L ++L A +RE+LA+A VP+ +G A++L+ AGL+SLAFM Sbjct: 127 KEYDFVQSLVYALGAGVGFTLALMLMAGLREKLALARVPSVSQGAALSLMLAGLLSLAFM 186 >UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C7LXH4_DESBD Length = 239 Score = 149 bits (377), Expect = 5e-35, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 6/162 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + F + LGLCP + V+ +GMG A FV++L+++ L+ Sbjct: 1 MASMMKEFTKGLWNELPPFRLVLGLCPVLAVTTTANNGLGMGAAVIFVLSLSNVIISLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R + FI + A +V EM+++ + LY+ LGIF+PLI NC +LG A Sbjct: 61 NII-----PKKVRIVCFIAIAASLVVTVEMLMQAFAYPLYQQLGIFVPLIVVNCIILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD 162 + L + G +GF+L + ++RE Sbjct: 116 EAFAA-KNPPLLALADGLGMGIGFTLSLTFLGSLREIFGSGT 156 >UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E subunit n=102 Tax=Bacteria RepID=A9KRX0_CLOPH Length = 253 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 6/162 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M+ L V+ N V LG+CP + V+ +GMGL TT V+ ++++ ++ Sbjct: 1 MSKALERIYNGVIKENPTFVLMLGMCPTLAVTTSAINGVGMGLTTTAVLIMSNMLISMLR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R AFI+V+A V +++++ P L LGI++PLI NC +LG A Sbjct: 61 KAI-----PDKVRMPAFIVVVASFVTIVQLLLQAYLPSLNDSLGIYIPLIVVNCIILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD 162 + + S G +GF++ + L RE L Sbjct: 116 EAYAS-KYPVYPSIFDGVGMGLGFTVGLTLIGLFREILGAGT 156 >UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E subunit n=5 Tax=Bacteria RepID=Q315L1_DESDG Length = 224 Score = 149 bits (376), Expect = 6e-35, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 18/196 (9%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M F + LGLCP + V+K GMG+A FV+ L+++ L+ Sbjct: 1 MASMWKEFSKGLWREIPPFRLVLGLCPVLAVTKSANNGFGMGMAVIFVLFLSNVIISLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R +I + A +V E++++ + LY+ LGIF+PLI NC +LG A Sbjct: 61 NLI-----PKKVRIACYIAIAASLVVAIELLMQAYAYPLYQQLGIFVPLIVVNCIILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAP---FRGN------- 170 + +A G +GF L + ++RE L V ++G Sbjct: 116 EA-FAGKNPVHLAAADGLGIGMGFCLSLTFLGSLREMLGTGTVFGHQVMWQGFKPLTFMV 174 Query: 171 --AIALITAGLMSLAF 184 A I+ GL+ A Sbjct: 175 EAPGAFISLGLVLGAM 190 >UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subunit E n=23 Tax=Proteobacteria RepID=NQRE_YERPE Length = 199 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 75/194 (38%), Positives = 117/194 (60%), Gaps = 6/194 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 YL +F+ V V N L FLG+C F+ +SKK+ETA G+GL T ++ +A+ LI T+ Sbjct: 4 SYLTIFIRAVFVENMALNFFLGMCTFLAISKKVETAFGLGLTVTALLAIATPLNNLIYTY 63 Query: 63 IL------IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAV 116 IL ++L +L + FI V+A +VQ EMV+ + P L+ LG FLPL+T +CA+ Sbjct: 64 ILRENALIDGVDLSFLDFITFIGVLAALVQILEMVLERFLPSLHHTLGAFLPLLTIHCAI 123 Query: 117 LGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALIT 176 G + + + F +S +YG +G+ L ++ A +RE++ +++P +G I +T Sbjct: 124 FGATIFMVQREYTFTESFVYGTGCGLGWMLAIISMAGLREKMKYSNIPKGLQGLGIVFMT 183 Query: 177 AGLMSLAFMGFSGL 190 AGLMSL FM FSG+ Sbjct: 184 AGLMSLGFMSFSGI 197 >UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV6_DESOH Length = 255 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 86/216 (39%), Positives = 125/216 (57%), Gaps = 28/216 (12%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D L+ + L+NNFVL F+G+CPF+GVS+ + A GMG A TFV+T+A+ +W I T+ Sbjct: 6 DIFLIAMSAALINNFVLYYFVGICPFIGVSRNISMAFGMGCAVTFVITIAAFISWAITTF 65 Query: 63 ILIP--------------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL 102 +LIP ++L L + +I I+ VQF EM VRK P LY+ Sbjct: 66 VLIPGAPLTAFVAGFFLPGEQAAAVDLTILSYIVYIFAISSSVQFVEMYVRKFFPPLYKS 125 Query: 103 LGIFLPLITTNCAVLGVALL--------NINLGHNFLQSALYGFSAAVGFSLVMVLFAAI 154 G+FLPLITTNCA+L L N + ++ + VGF++ +V+ A I Sbjct: 126 FGVFLPLITTNCAILFACLTIMSNVAVDNPAEAWDLGRALVLAIFGGVGFTIAIVIMAGI 185 Query: 155 RERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGL 190 RE L + DVP P +G AI L+TAG++++ FMGF+G+ Sbjct: 186 REELDMCDVPKPLQGAAITLVTAGILAMGFMGFTGV 221 >UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bacteria RepID=A1WT44_HALHL Length = 193 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 98/184 (53%), Positives = 130/184 (70%), Gaps = 1/184 (0%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ ++NNFVL FLG+CP +GVS KL TA MG+A+ FVM +AS+ A+ I +L Sbjct: 9 IFLNAAIINNFVLALFLGICPILGVSGKLGTAFPMGVASAFVMLIASLAAYGI-NIVLGY 67 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINL 126 L +L +A+I VIA VQ EM V+K SP LYR LGIFLPLITTNCA+LGVAL + Sbjct: 68 FELEFLSLIAYIAVIASAVQLVEMFVKKFSPPLYRALGIFLPLITTNCAILGVALFQTSY 127 Query: 127 GHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMG 186 +NFLQS Y A GF L +VL A +RE++ ++DVP+ RG A++L+ AG++SLAFMG Sbjct: 128 EYNFLQSLTYSLGAGAGFILAIVLMAGLREQVDLSDVPSVARGAAMSLMLAGVLSLAFMG 187 Query: 187 FSGL 190 F+GL Sbjct: 188 FAGL 191 >UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDT4_ANAPD Length = 215 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 17/197 (8%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + +F+ + NN V V+ +G+C + +S L A+GMG++ FV+ ++++ L+ + Sbjct: 21 NLGKVFIEGIFANNPVFVQTVGMCSVLAISSSLINAIGMGVSVIFVVVMSNLVISLLRNF 80 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R AFI++IA V +M ++ P L LGIF+PLI NC +L A Sbjct: 81 ISD-----EIRIPAFIVIIAGFVTMVQMAIKAYLPALDESLGIFIPLIVVNCLILARAEG 135 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD------VPAP-----FRGNA 171 + H + S + G +G++ + L A RE L +P + A Sbjct: 136 FASS-HGPVASIVDGLGQGLGYTFAISLLAFFRELLGAGTLFGAQIIPEAYTIGFLQQPA 194 Query: 172 IALITAGLMSLAFMGFS 188 + I G++ AF S Sbjct: 195 SSFIVLGMLVAAFNAIS 211 >UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E subunit n=11 Tax=Bacteria RepID=A1VAS6_DESVV Length = 223 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 18/196 (9%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + F + LGLCP + V+K +GMGLA FV+ L+++ ++ Sbjct: 1 MQQIIKEFTKGLWQELPPFRLVLGLCPTLAVTKTASNGLGMGLAVIFVLALSNMIISMVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R FI + A +V E++++ + LY+ LGIF+PLI NC +LG A Sbjct: 61 NII-----PKKVRIACFIAISASLVVAVELLMQAYAYPLYQQLGIFVPLIVVNCIILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAP---FRGN------- 170 + S G +GF+L +V IRE + ++G Sbjct: 116 EAFAA-KNPVSLSLADGLGIGLGFTLSLVFLGGIRELFGTGMLFGTQVMWQGYQPFGIMV 174 Query: 171 --AIALITAGLMSLAF 184 A I GL A Sbjct: 175 EAPGAFICLGLTLAAM 190 >UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFQ8_DESAH Length = 259 Score = 146 bits (369), Expect = 4e-34, Method: Composition-based stats. Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 29/217 (13%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D +L+ + L+NNFVL F+G+CPF+GVS++++ A GMG A TFV+T+A+ +W I T Sbjct: 6 DIILIALSAALINNFVLYYFVGICPFIGVSRRVDMAFGMGCAVTFVITIAAFLSWTITTM 65 Query: 63 ILIP--------------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL 102 +LIP ++L L + +I IA VQF EM VRK P+LY+ Sbjct: 66 VLIPGAPLSSFVAGFFLSKEAASTIDLTVLSYIVYIFSIASSVQFVEMYVRKFFPILYKS 125 Query: 103 LGIFLPLITTNCAVLGVALL---------NINLGHNFLQSALYGFSAAVGFSLVMVLFAA 153 G+FLPLITTNCA+L L N + S F VGF++ +V+ + Sbjct: 126 FGVFLPLITTNCAILFACLTIMSNVVGVENPADAWDLWHSLTLAFFGGVGFTIAIVIMSG 185 Query: 154 IRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGL 190 IRE L + D+P PF+G AI L+ G+++L+FMGF+G+ Sbjct: 186 IREDLELCDIPEPFKGAAITLVVGGILALSFMGFTGV 222 >UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax=Proteobacteria RepID=RNFE_VIBC3 Length = 230 Score = 146 bits (368), Expect = 5e-34, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M++ L + + NN LV+ LGLCP + VS + A+G+G+AT V+ +++ L+ Sbjct: 1 MSENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++ +R F+++IA +V ++++ + LY LGIF+PLI TNC ++G A Sbjct: 61 DYV-----PKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + ++ L +AL GF +G + V+V+ ++RE + + Sbjct: 116 EAFAS-KNDVLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTL 157 >UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0U7_9DELT Length = 203 Score = 146 bits (368), Expect = 5e-34, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 112/199 (56%), Gaps = 10/199 (5%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 Y +F + V N VL FLG+C F+ +S++++TA G+GLA + + LI Sbjct: 4 HYFEIFFTALFVENLVLTFFLGMCTFLAISRQVKTAFGLGLAVVIIQAITVPLNNLIYNL 63 Query: 63 ILIP----------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITT 112 +L P ++L +L L +I VIA VQ EM + + P LY LGIFLPL+T Sbjct: 64 VLQPGALGWLGLADIDLTFLGLLVYIGVIAATVQILEMFLDRYVPALYNTLGIFLPLLTV 123 Query: 113 NCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAI 172 NCA+LG +L + + +S YG A GF + +VL A IRE+L AD PA RG + Sbjct: 124 NCAILGASLFMVERDYALGESVAYGLGAGGGFLIAVVLLAGIREKLEYADPPAGLRGLGV 183 Query: 173 ALITAGLMSLAFMGFSGLV 191 I AGLM++AFMG +G+ Sbjct: 184 TFIAAGLMAMAFMGIAGIA 202 >UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E subunit n=1 Tax=Treponema denticola RepID=Q73PG5_TREDE Length = 190 Score = 145 bits (367), Expect = 6e-34, Method: Composition-based stats. Identities = 82/191 (42%), Positives = 126/191 (65%), Gaps = 1/191 (0%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + L +F+ +LV N VL++FL LCPF+G+S ++ ++GMG A FV LA+ + I Sbjct: 1 MPETLSIFLSAILVKNVVLMRFLALCPFIGMSSDVKKSVGMGWAVLFVTLLATAVTYPIY 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++LI NL +L+TL FILVIA +VQ E ++K +P LY +G++L LITTNCA+L V Sbjct: 61 NYVLI-GNLEFLQTLIFILVIASLVQLVEFYLKKAAPALYSSMGVYLALITTNCAILAVT 119 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 + I+ G+ F+Q+ ++ +A GF + ++L A +R+R+ A VP +G I I A L+ Sbjct: 120 IDAIDEGYTFVQALVHAAGSAFGFMISLLLLAGLRQRIDNAPVPKFLKGTPILFIAAALL 179 Query: 181 SLAFMGFSGLV 191 S+AF GF GL+ Sbjct: 180 SMAFEGFKGLI 190 >UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C6BZT1_DESAD Length = 228 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 18/200 (9%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M+ + F + LGLCP + V+ E +GMG+A FV+T++++ I Sbjct: 1 MSRLVKEFAKGLWDELPPFRVLLGLCPVLAVTSSAENGLGMGMAVIFVLTMSNLIISSIR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R FI++ A +V E++++ + LY+ LGIF+PLI NC +LG A Sbjct: 61 KII-----PTKVRIACFIVITASLVVTVELLMQAYAYPLYQKLGIFVPLIVVNCLILGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD---VPAPFRGN------- 170 + + + S +GF++ + AIRE + VP + Sbjct: 116 EAFAS-KNGVILSIADALGMGIGFAVSLTFLGAIREIIGAGTVFGVPVMWESFKPAEFMI 174 Query: 171 --AIALITAGLMSLAFMGFS 188 A + G++ F+ Sbjct: 175 MAPGAFVGLGVILAGMNAFN 194 >UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E subunit n=24 Tax=Bacteria RepID=B8J067_DESDA Length = 225 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 6/160 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 L F + LGLCP + V+ + +GMG+A FV+ L+++ ++ + Sbjct: 2 SILQEFTKGLWKELPPFRLVLGLCPTLAVTNSADNGLGMGVAVIFVLVLSNMLISMVRSI 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R FI++ A +V E++++ + LY+ LGIF+PLI NC +LG A Sbjct: 62 I-----PKTVRIACFIVIAASLVVAVELLMQAYAYPLYQRLGIFVPLIVVNCIILGRAEA 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD 162 + S G +GF+L + ++RE Sbjct: 117 FAA-KNGVAASIADGLGMGLGFTLSLTFLGSLREIFGNGT 155 >UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase subunit E n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU9_ACHLI Length = 194 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 121/192 (63%), Gaps = 2/192 (1%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + + LF+ ++L NN L+ LG+C + VS ++ ++ MG+A FV+T+ +I W I Sbjct: 2 ELIELFLASILSNNIALIFILGMCSLIAVSTSIKNSVNMGVAVIFVVTITAIINWPIYE- 60 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L L L FI+VIA VQF EM + K P +Y GIFLPLIT NC VL V+L Sbjct: 61 LLKATGTEQLALLVFIIVIAAFVQFLEMFLAKYFPKIYESFGIFLPLITVNCIVLSVSLF 120 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERL-AVADVPAPFRGNAIALITAGLMS 181 ++FLQ+ ++ F ++VG++ M+L A +R+++ V+++P RG AIA + G+++ Sbjct: 121 FQQRNYDFLQTTVFAFGSSVGWTFAMILLAGVRQKMYRVSNLPKGLRGRAIAFLILGILA 180 Query: 182 LAFMGFSGLVKL 193 LAF+GF+G+ ++ Sbjct: 181 LAFIGFTGIGRV 192 >UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=Methanosarcinaceae RepID=Q12W81_METBU Length = 196 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 90/191 (47%), Positives = 136/191 (71%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 +F+ V + NF++++FLGLC F+GV+K ++A GM A FVMTLA+ ++LI + Sbjct: 6 SLFQIFMDGVFIKNFLIIQFLGLCSFVGVTKDTKSAAGMSGAVIFVMTLAATVSFLIYNF 65 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 +L+PL L +L ++FI+VIA +VQ E VVRK P LYR LGI+LPLITTNCAVLGV LL Sbjct: 66 VLVPLKLEFLDLISFIVVIAALVQLVEFVVRKNVPSLYRSLGIYLPLITTNCAVLGVVLL 125 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 N+ ++F+QS ++G SA +G++LVM++ + IRER + +VP+ RG A + A ++S+ Sbjct: 126 NVLNEYSFIQSVVFGVSAGIGYALVMLMMSGIRERTTLVNVPSSMRGLPHAFLIATMLSM 185 Query: 183 AFMGFSGLVKL 193 AF+ + G++ L Sbjct: 186 AFVNYFGVIPL 196 >UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=D1B8H9_THEAS Length = 239 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M ++ G + N V V+ +GLCP + V+ +GMG+A T V+ +++ ++ Sbjct: 1 MASFIERIRGGLAKENPVFVQAIGLCPTLAVTTSAVNGLGMGVAATAVLMGSNVVISMLR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +I +R AFI+VIA V + +V +PVL + LGIF+PLI NC +L A Sbjct: 61 RFI-----PNQIRIPAFIVVIAGFVTIIQFLVSAYAPVLDKSLGIFIPLIVVNCIILARA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + S G +GF++ +++ +IRE + + Sbjct: 116 EA-FAFKNGVIPSLFDGIGMGLGFTVALMILGSIREIIGAGTL 157 >UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subunit E n=345 Tax=Bacteria RepID=NQRE_COLP3 Length = 207 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 80/205 (39%), Positives = 116/205 (56%), Gaps = 15/205 (7%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M YL +F+ T+ + N L FLG+C F+ VSKK+ TA+G+G+A V+ LA +I Sbjct: 1 MEHYLSIFIKTIFIENMALSFFLGMCTFLAVSKKVSTAIGLGVAVVVVLGLAVPANQIIY 60 Query: 61 TWILIP---------------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGI 105 IL P ++L +L + FI VIA +VQ EM++ K P LY+ LGI Sbjct: 61 QAILAPGALDSLMGITDPKESIDLSFLSFITFIGVIAALVQILEMLLDKYFPALYQALGI 120 Query: 106 FLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPA 165 FLPLIT NCA+ G + +S +YG + +G+ L +VL A +RE++ +DVP Sbjct: 121 FLPLITVNCAIFGAVSFMVAKNLTLGESVVYGVGSGIGWMLAIVLMAGLREKMKYSDVPN 180 Query: 166 PFRGNAIALITAGLMSLAFMGFSGL 190 +G I ITAGLM+ F+ F G+ Sbjct: 181 GLKGLGITFITAGLMAFGFLSFGGI 205 >UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax=Bacteria RepID=RNFE_AZOVD Length = 238 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 77/159 (48%), Gaps = 6/159 (3%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 F + N LV+ L LCP + V+ +GMGLATT V+ + + + I Sbjct: 18 WQYFTSALWQYNVALVQMLALCPTLAVTTTATNGLGMGLATTLVLVMTNALISSMRHTIS 77 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNI 124 +R I VIA VV T+M + LY++LG+F+ LI TNCAVLG A + Sbjct: 78 P-----EVRNPVMIGVIAGVVTLTDMAMNAWMHELYKVLGLFIALIVTNCAVLGRAE-SF 131 Query: 125 NLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 L + + S L G GF+ V+V+ IRE L + Sbjct: 132 CLRNPVIPSILDGAGMGAGFTAVLVVIGGIREILGSGTL 170 >UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=A0L5G3_MAGSM Length = 222 Score = 142 bits (358), Expect = 7e-33, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 85/158 (53%), Gaps = 6/158 (3%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 + NN V + LG+CP +GV+ +GMGLA+ V+ A++ ++ ++I Sbjct: 8 EIVANGFWNNNAVFAQLLGMCPLLGVTTTAMNGIGMGLASLVVLLGANVVVAMVRSYI-- 65 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 +R ++I+VIA V ++ + L+++LG+F+PLI NCA+LG A + Sbjct: 66 ---PSEVRIPSYIVVIASFVTIVDLCMNAWLHDLHKILGLFIPLIVVNCAILGRAEAFAS 122 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 ++ +SA+ G + +GF+ + + A+RE L ++ Sbjct: 123 R-NSVGKSAIDGIATGLGFTFALFVLGAVREILGAGEI 159 >UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subunit d n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5W2_9BACT Length = 243 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M++ L V + N + V LG+CP + V+ + MGLA T V+ +++ + Sbjct: 1 MSNPLKTIVNGLFAENPIFVLVLGMCPTIAVTSSAMNGLSMGLAATAVLIGSNVAISALR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +I +R +FI+VIA V ++++ P L + LGIF+PLI NC +L A Sbjct: 61 RFI-----PDEIRIPSFIVVIAGFVTALQLIIAAYFPALDKALGIFIPLIVVNCIILARA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + SA G +GF+L ++L AIRE + V Sbjct: 116 EAFAS-KNGVFASACDGLGMGLGFTLALILIGAIRELIGAGSV 157 >UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D subunit n=1 Tax=Treponema denticola RepID=Q73PG4_TREDE Length = 219 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 6/159 (3%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 L +F ++ NN +LV +GLC + V+ + +GMGLA TFV+ ++ + + I Sbjct: 4 LSIFTNGIIRNNPLLVLMIGLCSSLAVTTNILNGLGMGLAMTFVIVMSELIISIFRKLI- 62 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNI 124 +R FI+VIA +++++ +P L +G+F+ LI NC ++G + Sbjct: 63 ----PQDIRIPVFIIVIASFTTIVDLLMQAYTPALADAMGLFIKLIVVNCIIMGRVE-SF 117 Query: 125 NLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + +S L VG+++V+VL +AIRE L + Sbjct: 118 ASKESPGKSVLDALGMGVGYTIVLVLISAIREILGSGSL 156 >UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:quinone reductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW71_9BACT Length = 210 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 7/160 (4%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 F + N + V LG+CP + V+ L+ + MG A TFV+ ++ LI ++ Sbjct: 6 WQEFSKGLFKYNALFVLVLGICPSLAVTTSLKNGVSMGGAATFVLVSSNFIISLIRPYV- 64 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSP-VLYRLLGIFLPLITTNCAVLGVALLN 123 +R FI+VIA V E++++ P + LGIF+PLI NC +L A Sbjct: 65 ----PREIRIPCFIVVIASFVTIVELMMKAYLPTEINASLGIFIPLIVVNCIILYRAEA- 119 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + S L G +G++L + L + +RE L + Sbjct: 120 FAYKNKPFVSILDGLGIGLGWTLSLCLVSGVREMLGAGTL 159 >UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E subunit n=4 Tax=Bacteria RepID=A1WT45_HALHL Length = 219 Score = 139 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 6/156 (3%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F+ V N V V LG+CP + V+ E A+ MGLATTFV+ ++ ++ +I Sbjct: 15 FLSGVWRENPVFVMLLGMCPVLAVTNTTENALAMGLATTFVLVCSTGLVSVLRDFI---- 70 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 +R ++I++IA V + ++ S +Y LG F+ LI NC +LG A + Sbjct: 71 -PKEVRIASYIVIIASFVTVVDYAIQAISLDIYNALGAFIQLIVANCMILGRAEAFASRK 129 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 ++ + GF+L ++ +RE L ++ Sbjct: 130 -PLGKTLVDALGVGAGFTLALLCLGTVRELLGAGEI 164 >UniRef50_Q0VP36 Electron transport complex protein rnfE, putative n=10 Tax=Gammaproteobacteria RepID=Q0VP36_ALCBS Length = 238 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 91/166 (54%), Gaps = 6/166 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 +Y + + + NN V+ LGLCP + V+ + AMG+GLAT V+ ++ C LI + Sbjct: 6 NYKKISMDGLWNNNPATVQILGLCPLLAVTGSVVNAMGLGLATLVVLMGSNACVSLIRHY 65 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 + +R AF+++IA +V EM+++ + LY +LGIF+PLI TNC VLG A Sbjct: 66 VTD-----AVRLPAFVMIIAAMVTVIEMLMQAYTFELYEILGIFIPLIVTNCTVLGRADA 120 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFR 168 + + L + + G +GF +++++ +RE + + + + Sbjct: 121 FAS-KNAVLPAMVDGVMMGMGFLVILLILGGMRELVGQGTLFSNMQ 165 >UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E subunit n=8 Tax=Bacteria RepID=B8FN67_DESAA Length = 203 Score = 139 bits (350), Expect = 7e-32, Method: Composition-based stats. Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 7/176 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 F + LGLCP +GV+ ++ +GMGLATTFV+ A++ + Sbjct: 3 KTLTQEFTKGLWQEIPPFRLVLGLCPTLGVTTTVQNGVGMGLATTFVLVCANLLVSALRK 62 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 I +R FI+VIA V EM+++ + LY +LGIF+PLI NC VLG A Sbjct: 63 VI-----PPKVRIACFIVVIATFVTLVEMLMQAFTYPLYGMLGIFIPLIVVNCIVLGRAE 117 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITA 177 + L S G +GF++ + A+RE + PF G + +++A Sbjct: 118 A-FAYKNPILPSLADGLGIGLGFTMALGALGAVREVIGTGCFTVPF-GPTLTILSA 171 >UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=Vibrio cholerae 2740-80 RepID=A1F5P3_VIBCH Length = 177 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 49/156 (31%), Positives = 88/156 (56%), Gaps = 6/156 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + L + + NN LV+ LGLCP + VS + A+G+G+AT V+ +++ L+ Sbjct: 1 MNENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++ +R F+++IA +V ++++ + LY LGIF+PLI TNC ++G A Sbjct: 61 DYV-----PKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRE 156 + ++ L +AL GF +G + V+V+ ++RE Sbjct: 116 EAFAS-KNDVLPAALDGFWMGLGMTSVLVVLGSLRE 150 >UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subunit d (Na(+)-translocating nqr subunit d) n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PN80_9SPIO Length = 272 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +Y+ +F ++ N +++ +GLC + ++ + +GMGLA TFV+ L+ + + Sbjct: 1 MKEYVRIFTNGLVKENPLIMLMIGLCSALAITTSVANGIGMGLAMTFVIVLSEMIISMFR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +I +R FI+VIA +++++ P L +GIF+ LI NC ++G Sbjct: 61 KFI-----PNDIRIPIFIIVIASFTTIVDLLMQAFLPELSESMGIFIKLIVVNCIIMGRV 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + +++ +GF+ V+V+ +AIRE L V Sbjct: 116 E-SFASKESPIKAMADALGMGLGFTWVLVVMSAIRELLGSGTV 157 >UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Proteobacteria RepID=C5SAZ4_CHRVI Length = 220 Score = 135 bits (340), Expect = 8e-31, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 6/156 (3%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F+ + N V V LG+CP + V+ A+ MGLATTFV+ +S+ L+ WI Sbjct: 16 FLRGLWEENPVFVMLLGMCPVLAVTSTTLNAIAMGLATTFVLVCSSLLISLLRNWI---- 71 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 +R ++I++IA V + ++ S LY LG F+ LI NC +LG A + Sbjct: 72 -PKQVRIASYIVIIATFVTIVDYAIQAISLELYAALGAFIQLIVVNCVILGRAEAYAS-K 129 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + VGF+L ++ +RE L + Sbjct: 130 QRLHTTLVNSLGMGVGFTLALLALGTVREVLGNGTL 165 >UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-like n=3 Tax=Bacteria RepID=Q3A7X1_PELCD Length = 202 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 6/161 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 +F + NN + LG+CP + V+ +GMGLATT V+ +++ + T Sbjct: 2 KLWAIFSSGLWRNNAIFKLVLGMCPTLAVTTSAMNGLGMGLATTSVLLCSNMAVSALRTL 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R AFI++IA V ++++ + LY+ LGIF+PLI NC +LG A Sbjct: 62 I-----PAKVRIPAFIVIIATFVTVVQLLMEAYAFELYQALGIFIPLIVVNCLILGRAEA 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + SA G +GF+L +V+ +RE L + Sbjct: 117 FASRQ-PLWASAADGAGMGLGFTLALVMLGGVRELLGAGSL 156 >UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachyspira RepID=C0R023_BRAHW Length = 219 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 6/157 (3%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 +F+ V NN V+ LG+CP + V+ + A+GM +AT FV+ +S LI Sbjct: 5 QVFMEGVWKNNPTFVQVLGMCPSLAVTSSVMNAIGMSVATIFVLVCSSALISLIKK---- 60 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 + +R + +I+VIA V T++V++ L LG ++PLI NC +LG A Sbjct: 61 -IYANEVRIMGYIVVIAAFVTLTDIVMKAKFYTLSLALGPYIPLIVVNCIILGRAEA-FA 118 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD 162 + + S VGF + + L A+IRE L Sbjct: 119 NKNGIIPSIFDALGNGVGFFIALTLLASIREVLGNGT 155 >UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 Length = 213 Score = 132 bits (333), Expect = 6e-30, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M +F ++ N +LV L LCP + + + MGL FV+T + +I Sbjct: 1 MKGLWNIFKKGLVSENPILVLALSLCPALATTSSAVNGLTMGLCVLFVITCNNTVVSIIK 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 ++ +R +I IA +V E+V+ +P LY LGI+L L+ +L A Sbjct: 61 KFVNPK-----VRVPVYITCIATIVTVVELVLEAYAPELYSQLGIYLALVVVFAIILARA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + + S G GF+L +VL + IRE V Sbjct: 116 ETFAS-KNPVIPSFFDGLGMGCGFTLALVLISIIRELFGAGTV 157 >UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=Buchnera aphidicola RepID=RNFE_BUCAT Length = 227 Score = 129 bits (326), Expect = 3e-29, Method: Composition-based stats. Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 6/161 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + + NN LV+ LGLCP + ++ A+G+G+ TT V+T+ + Sbjct: 2 NIKSFLNNRLWKNNSSLVQLLGLCPVLAMTTNAINAIGLGMTTTLVLTITNTIISSFRKI 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I LR ++++I+ VV EM++ + LY+ LGIF+PLI TNC ++G A L Sbjct: 62 I-----PKDLRIPIYMMIISSVVTSIEMLLHAYTFNLYQSLGIFIPLIVTNCIIVGRADL 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 I + ++S G +G M +IRE L + Sbjct: 117 -IAYKSSIVESFFDGIFIGLGSMFAMFAVGSIREILGNGTL 156 >UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=Methanosarcinaceae RepID=Q12W80_METBU Length = 203 Score = 128 bits (323), Expect = 8e-29, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 6/161 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 D L F+ + +N + LGLCP + V+ ++ A+GM T FV+ +++ + Sbjct: 2 DPLSEFIRGITKDNPIFGLVLGLCPTLAVTTSIDNAIGMSAGTAFVLICSNLMVSGLRKQ 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R FIL+IA V +MV+ P +Y LG+F+PLI NC ++G A Sbjct: 62 I-----PASVRLPIFILIIATFVSIVKMVMEAYFPPMYAALGVFIPLIVVNCIIIGRAEA 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 N +N S + ++ GF LV+VL IRE L + Sbjct: 117 YAN-KNNMFYSLIDALGSSAGFLLVLVLIGGIRELLGTGGI 156 >UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax=Proteobacteria RepID=RNFE_ECOSM Length = 231 Score = 128 bits (323), Expect = 8e-29, Method: Composition-based stats. Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M++ + V + NN LV+ LGLCP + V+ A+G+GLATT V+TL ++ + Sbjct: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 W +R ++++IA VV +M++ + LY+ LGIF+PLI TNC V+G A Sbjct: 61 HW-----TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 L SAL GFS +G + M + ++RE + + Sbjct: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMCVLGSLREIIGNGTL 157 >UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUK9_9FIRM Length = 199 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 6/158 (3%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 +F +L NN ++ +GLC + ++ + ++ MG+A TFV+ +++ + I Sbjct: 5 KVFTDAMLKNNPTFMQLIGLCSVLAITNNVINSVSMGIAVTFVLIMSNGVVSALRNVI-- 62 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 +R FI+VIA V +M+++ + +Y LGIFLPLI NC +LG A Sbjct: 63 ---PDKIRIPCFIVVIATFVTLVQMILQAYATPIYLALGIFLPLIVVNCCILGEAEG-FA 118 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + S + G VG++L +++ +RE + Sbjct: 119 YKNKLIPSLVDGLGTGVGYTLAVLIMGVVREFFGYGSL 156 >UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4 Tax=Erysipelotrichaceae RepID=D2MN20_9FIRM Length = 216 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 6/154 (3%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F+G ++ + V +LGLC + +S L A+GMG+ FV+ L+++ ++ + Sbjct: 9 FLGRLISESPVFSMYLGLCSTLAISTSLNNALGMGIGVIFVLVLSNMLVSMVRH-----I 63 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 + +I +IA +V M++ +P L+ LG FL LIT NC +LG A Sbjct: 64 TPDDIHIPVYITIIATLVTVLSMLMHAFTPTLFTALGAFLDLITVNCIILGRAEA-FACK 122 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 +N + S GF + ++ ++ A IR+ + Sbjct: 123 NNVVDSVKDGFQMGLAYTGALLCMAVIRQIVGTG 156 >UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=Proteobacteria RepID=RNFE_MAGSA Length = 223 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 Y + + NN VL LG+CP M ++ +GMGLAT VM +++ + Sbjct: 3 ASYGRIIKDGLWENNGVLCMLLGMCPTMAMTGTATNGLGMGLATAAVMAASNLMVAMFRN 62 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 ++ +R +IL++A V F ++ + LY++LG+F+PLI +NC L Sbjct: 63 YVT-----HEVRIPVYILIVAANVTFVDLGMNAWMHELYKVLGLFIPLIVSNCLPLARLE 117 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 L S L G +GF+L + A+RE + + Sbjct: 118 AFAA-KEPVLPSFLDGLFMGLGFTLALTAIGAVREMIGQGTL 158 >UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A682_NATTJ Length = 206 Score = 126 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 + F +L N + + LGLCP + V++ ++G+G AT V+ A+I L+ Sbjct: 2 KFSEAFTQGLLKENGLYRQLLGLCPALAVTQTAMNSLGLGAATMAVLLAANIVISLVKNL 61 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 I +R ++I++IA V +M + +P L+ LGIF+PLI TNC +LG A Sbjct: 62 I-----PKKIRIPSYIVIIATFVTIVDMFLEAFTPDLHAALGIFIPLIVTNCLILGRAEA 116 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + +GF+L ++ +RE + Sbjct: 117 FAS-KEKVTSAIGDALGMGIGFTLGLLSLGVVRELFGKGSL 156 >UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subunit D n=132 Tax=Bacteria RepID=NQRD_AERS4 Length = 210 Score = 125 bits (315), Expect = 7e-28, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 6/161 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 ++ L + VL NN + ++ LG+C + V+ +++TA M LA T V +++ LI Sbjct: 5 SEMKKLLLTPVLGNNPIALQVLGVCSALAVTSQMKTAFVMTLAVTAVTAFSNLFISLIRN 64 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 I +R +A + VIA +V + V++ + + + L +F+ LI TNC V+G A Sbjct: 65 QI-----PNSVRIIAQMAVIASLVIVVDQVLKAYAYEISKQLSVFVGLIITNCIVMGRAE 119 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVAD 162 + L S L G +G+ V++ A +RE L Sbjct: 120 AY-AMKSAPLPSFLDGIGNGLGYGAVLLTVATVREILGSGT 159 >UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaproteobacteria RepID=C1D6V3_LARHH Length = 239 Score = 125 bits (314), Expect = 8e-28, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + + + + N +V+ LGLCP + VS + + +GLAT V L+ + Sbjct: 16 SPWKSIAFNGIWKQNAGVVQLLGLCPVLAVSTSIVNGVSLGLATALVTALSGAAVAAVRQ 75 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 W+ +R FI +IA +V ++ + LY +LGIF+PLITTNC VL A Sbjct: 76 WV-----PSEIRNPIFITIIAALVTMVDLAMNAWVHGLYNVLGIFIPLITTNCIVLARAE 130 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + +SA G +G + V+ L A+RE + Sbjct: 131 AFAS-KNPVRESAWDGLMMGLGLTGVLGLLGAMRELFGKGTL 171 >UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP91_9FIRM Length = 198 Score = 125 bits (314), Expect = 9e-28, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 88/186 (47%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 ++ + + V N + + LG S+K E+ G+GL T+V+ ++S + ID W+ Sbjct: 7 FINTAMLAMFVENAIFSRALGTSVAFYASRKKESIFGLGLGITYVIVVSSCITFFIDGWL 66 Query: 64 LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 + L + L +++V + +++ + P ++R + ++ L N AVLG LN Sbjct: 67 ADWQYFYVVMPLIYTLTVSIVYTGSLLLLWRFLPKIFRNIKKYVHLSVFNAAVLGALFLN 126 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLA 183 +F +G A GF + + ERL +P FRG I ++ G+MSLA Sbjct: 127 TTYHADFFSYMGFGVGIAAGFFIAVFFLHIANERLNSPLIPEAFRGMPIMMVFVGIMSLA 186 Query: 184 FMGFSG 189 F +G Sbjct: 187 FYALTG 192 >UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subunit D n=16 Tax=Bacteria RepID=NQRD_HAEDU Length = 207 Score = 122 bits (308), Expect = 4e-27, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + L + + NN + ++ LG+C + V+ +L+TA M +A + V +S+ +I Sbjct: 4 NNLKKLLLSPISDNNPIALQILGICSALAVTTQLQTAFVMAIAVSLVTAFSSMFISMIRN 63 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 +I +R + + +IA +V + ++R L + L +F+ LI TNC V+G A Sbjct: 64 YI-----PNSIRIIVQMAIIASLVILVDQILRAYVYDLSKQLSVFVGLIITNCIVMGRAE 118 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + L+S + G +G+ ++V+ A +RE + + Sbjct: 119 A-FAMKSAPLESFVDGIGNGLGYGAMLVIVAFLRELIGSGKI 159 >UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subunit D n=228 Tax=Bacteria RepID=NQRD_PSEA8 Length = 224 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 6/160 (3%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 + V NN + ++ LG+C + V+ L+TA M +A T V +++ +I I Sbjct: 8 IREVLFNPVFQNNPIGLQILGICSALAVTSNLKTATVMAIALTLVTGFSNLFISMIRRQI 67 Query: 64 LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 +R + +++IA +V + V++ + L + L +F+ LI TNC V+G A Sbjct: 68 -----PSSIRMIVQMVIIASLVIVVDQVLKAYAYSLSKQLSVFVGLIITNCIVMGRAEA- 121 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + L S G +G+S ++++ +RE + Sbjct: 122 FAMANPPLVSFFDGIGNGLGYSAMLLVLGFVRELFGAGKL 161 >UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desulfobacteraceae RepID=A8ZSV5_DESOH Length = 207 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 6/154 (3%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 F+ ++ N V + LGLCP + V+ +++AM M A FV+ A++ LI + Sbjct: 11 FLQGIIPENPVYRQLLGLCPVLAVTGNMQSAMTMAGAVLFVLFCANVMISLIRNILKP-- 68 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 +LR + F L IA V + + + + LG ++PLI NC ++ + + Sbjct: 69 ---HLRIVIFTLTIATFVTIVDRFLAAYMYNMSKALGPYIPLIIVNCIIICRCEVCAS-K 124 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVA 161 + + ++GF+L + A +RE L Sbjct: 125 QSVFHAGADAIGQSLGFALALASIATVREILGTG 158 >UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1N2_HALNC Length = 231 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 6/161 (3%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTW 62 Y L V + NN LV+ LG+CP M +S + ++G+ +AT M +++ A +I W Sbjct: 5 SYRDLAVQGLWKNNPGLVQILGMCPMMAISNTVVNSLGLAMATILTMVVSNGLASVIRHW 64 Query: 63 ILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 + +R F++V+A VV E+ + LY +LGIFLPLI TNC V+ Sbjct: 65 VRP-----EVRLPVFVMVVASVVTVIELWMNAYLNTLYHVLGIFLPLIVTNCIVIARVEG 119 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + L S G +GF LV+V IRE L + Sbjct: 120 FAAR-NPVLPSLYDGLMMGLGFGLVLVALGVIRELLGFGTL 159 >UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3 Tax=Rhodocyclaceae RepID=Q5P1B5_AZOSE Length = 232 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 11/177 (6%) Query: 10 GTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNL 69 + N LV+ LGLCP + VS + A+ +GLAT VM +++ + +I Sbjct: 12 NGLWKQNTGLVQLLGLCPILAVSTSVVNAVSLGLATVVVMAVSNFAVASLRNFI-----P 66 Query: 70 IYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHN 129 +R FIL+IA + ++ LY +LGIF+PLI TNC VL ++ Sbjct: 67 YEIRIPVFILIIAALTTVVDLAFNAYLHDLYLVLGIFIPLIVTNCIVLARVEAYAA-KND 125 Query: 130 FLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMG 186 + S + G +G ++ + IRE + + F G I ++ GL L+ G Sbjct: 126 PVASTVDGIMMGLGLVWLLGVLGGIRELVGSGTL---FSG--IEMVIPGLSPLSVFG 177 >UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Tax=Bacteria RepID=RNFE_PSEA7 Length = 239 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 6/165 (3%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 + + NN LV+ LGLCP +G S A+G+GLAT V+ ++ L+ + Sbjct: 6 LREIARDGLWRNNPGLVQLLGLCPLLGTSNSTVNALGLGLATLLVLVCSNAAVSLVRGAV 65 Query: 64 LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 +R AF+++IA + E++++ + LY++LGIF+PLITTNC +LG A Sbjct: 66 S-----EAIRLPAFVMIIAALTTCIELLMQAWTYELYQILGIFIPLITTNCVILGRAEAF 120 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFR 168 + L+++ G +GF+LV+++ +RE L + A + Sbjct: 121 AA-KNGVLRASFDGLLTGLGFALVLLVLGGLRELLGQGTLLADMQ 164 >UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A6TT08_ALKMQ Length = 209 Score = 119 bits (299), Expect = 5e-26, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 +F +L +N V + LG+C + V+ + ++ MG+ FV L+S ++ Sbjct: 3 KKTKRIFQLGILNDNPVFRQILGICSALAVTNLMINSLVMGIGLIFVTALSSFTVSVLRK 62 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 ++R + L+I+ V ++V++ P + LG ++ LI TNC ++G Sbjct: 63 -----HTPRHIRMMVQTLIISAYVIIVDIVLKAYYPSMSDALGPYVGLIITNCIIMGRCE 117 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + L G ++ +G++ V++L A RE L + Sbjct: 118 SY-AQNNPPSLAFLDGIASGLGYTFVLLLIAFFRELLGFGSI 158 >UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase subunit D n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU8_ACHLI Length = 219 Score = 116 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 85/162 (52%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + L+ + N ++V LG+C + V+ ++E A+ MG+ TFV+ +S+ ++ Sbjct: 20 KKWFLILKNGISEENPIIVSVLGICSALAVTNRVENAIVMGIGVTFVIMASSMMVSMMRN 79 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 I +R +AF+++I++ +M ++ PV+ LG + LI TNC V+G A Sbjct: 80 LI-----PSKVRMVAFMVIISMFTIVVQMFLQAFLPVVAANLGAYTGLIITNCIVMGRAE 134 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + + + GF+ +G++LV++ AA+RE LA Sbjct: 135 A-FAIKNPVKYTIIDGFANGMGYTLVLIAIAAVREPLAFGTF 175 >UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone reductasesubunit E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q255_9BACT Length = 472 Score = 112 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 15/203 (7%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 +L + + + + VL K LG+CP + S++++ A MG+A VMTL++ W++ + Sbjct: 271 FLPILLNALFFDGIVLSKLLGICPLLNKSRQIDAAWKMGIAVIIVMTLSTALNWVVYNKV 330 Query: 64 LIPLN-------------LIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLI 110 LI + FI+ IAV VQ +++RK + Y +G FL LI Sbjct: 331 LIMGSDVLAKYSSMSIRLEKIFYLTVFIVTIAVFVQTLSVMLRKFARTAYEQMGQFLELI 390 Query: 111 TTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGN 170 T NC VL A I G +F+ S + F + + +V V A +R + + + Sbjct: 391 TVNCIVLASATFTIPTGTSFMVSTITAFGYGLHWLMVTVWLALLRRQRLFVPT-NAWDED 449 Query: 171 AIALITAGLMSLAFMGFSGLVKL 193 IA++ G+M+ F G G++++ Sbjct: 450 TIAILLLGIMAAIFTGI-GMIRI 471 Score = 74.5 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 7/181 (3%) Query: 13 LVNNFVLVKF--LGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLI 70 L +N +L LG C + V+ KLE ++ MGL FV + + I I + Sbjct: 16 LRDNLILTAGAGLGFCSALAVTNKLENSLTMGLGVLFVAMGSFSLIYPFRRLITIAGSHH 75 Query: 71 YLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNF 130 + L +++++V V + P + + ++ LITTNC VL V + + F Sbjct: 76 KISLL--MIIVSVFVTIFAFFAQAFVPEVAASIRAYIDLITTNCIVLAVISEGLTV--PF 131 Query: 131 LQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGL 190 ++ A +G++ ++L A +RE L + F LM GF L Sbjct: 132 WEAQKKILKACMGYAFALILLAFLREPLGFGTI-MGFSVIPETFPRVVLMITPVGGFFAL 190 Query: 191 V 191 Sbjct: 191 A 191 >UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subunit D n=3 Tax=Deltaproteobacteria RepID=Q2LXT9_SYNAS Length = 214 Score = 112 bits (280), Expect = 8e-24, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 6/158 (3%) Query: 6 LLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILI 65 L +L+ N + L +CP +G++ ++ + +G A FV +S I +I Sbjct: 17 ELLFNGILLENPIFRLALSMCPAVGLTTSIKNGLLLGTAVLFVQVFSSCTIAAIKNFIHP 76 Query: 66 PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNIN 125 +R + L IA V ++V+ P Y+ +G+F+ LI + Sbjct: 77 R-----IRIPTYTLTIATWVTVIDLVLAAYVPEAYKQVGLFVKLIVAFAIITMRLE-MFA 130 Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + S G +GF + MV +RE L + Sbjct: 131 CKNTVTSSFFDGVGMGIGFMVGMVTIGFVRELLGAGTL 168 >UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subunit D n=15 Tax=Chlamydiales RepID=NQRD_CHLTA Length = 213 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 6/162 (3%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 YL F + +NN L+ LG+C + V+ + TA+ MG A +FV +S L+ Sbjct: 5 KSYLTYFTDALWINNQPLIAILGICSALAVTTTVTTALTMGFAVSFVTGCSSFVVSLLRK 64 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 + +R +A +++I++ V + ++ + + L +F+ LI TNC V+G A Sbjct: 65 -----ITPESVRMIAQLIIISLFVILIDQFLKAFFFTISKTLSVFVGLIITNCIVMGRAE 119 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + + L G + +G+ V+V + IRE + Sbjct: 120 SM-ARHVSPIPAFLDGLGSGLGYGWVLVCISIIRELFGFGTI 160 >UniRef50_D1PJN1 Putative electron transport complex protein RnfE n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN1_9FIRM Length = 405 Score = 108 bits (271), Expect = 8e-23, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 67/152 (44%), Gaps = 7/152 (4%) Query: 12 VLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIY 71 + ++N V+V LGL P +G + E A+ + +A+ ++T + A + L+ Sbjct: 206 IWLSNPVMVCGLGLAPVVGAALDGERALILCVASLLLITFTRVLAVAVCH-----LSGNR 260 Query: 72 LRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFL 131 R + + A++ +++ + LGI+LP++ A++ Sbjct: 261 FRPIIYSYAAALLYIPVYILLYEFFGNSLTALGIYLPILVVEPAIVKRME--FAELEPLR 318 Query: 132 QSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + +GF+ +G + +++ +RE LA V Sbjct: 319 DALRHGFNNGIGMCVALLIVGCLREFLASGTV 350 >UniRef50_Q4K757 Membrane protein, putative n=2 Tax=Pseudomonas fluorescens RepID=Q4K757_PSEF5 Length = 193 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 4/194 (2%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGV--SKKLETAMGMGLATTFVMTLASICAWL 58 MTD+LL V T L+NNFVL LG+ P + +GLATT +M ++ + Sbjct: 1 MTDFLLALVSTALINNFVLQWPLGVDPLLQAPADGARLRIHALGLATTALMLVSCALGHV 60 Query: 59 IDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLG 118 + +L+P L L+ A++ + +++ + + P L G++ PL+ N +LG Sbjct: 61 LYRGVLVPSGLQSLQLFAWLSLSVLLIGPALHWLPRALPSL-PFDGLW-PLLLANAGMLG 118 Query: 119 VALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAG 178 + L+ A +GF LV+ LF +R+R++ D+P P++G I LI+AG Sbjct: 119 LLLIASGENLGLATLGAMSLGAGLGFWLVLSLFNDLRQRISTNDIPLPWQGLPIDLISAG 178 Query: 179 LMSLAFMGFSGLVK 192 L+++AF GF+GL+K Sbjct: 179 LLAVAFFGFNGLLK 192 >UniRef50_B0P6D2 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D2_9FIRM Length = 203 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 5/194 (2%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 ++++L+ ++ N V + LG K + G +++TL++ AW ++ Sbjct: 5 ISEFLIAAFTAAILQNAVFARGLGASGETLALNKPRGILRFGAFVIYIVTLSAALAWPLN 64 Query: 61 TWILI-----PLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCA 115 + + L + YL ++ +L I +V T V R P L+ L N A Sbjct: 65 YLLRLYRLSSRLGIRYLSSITTLLCICLVFALTYAVTRAWLPRLHYALRPLALPAALNTA 124 Query: 116 VLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALI 175 VLG LL + G+ +L++ + F + G++L ++L + R+R+A++DVP FRG +ALI Sbjct: 125 VLGAILLAFSSGYGYLKTCGFAFGSGAGYTLALLLISEGRKRIALSDVPRAFRGLPVALI 184 Query: 176 TAGLMSLAFMGFSG 189 G++SLA G G Sbjct: 185 YIGILSLAIYGLIG 198 >UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA n=1 Tax=Actinobacillus pleuropneumoniae serovar 1 str. 4074 RepID=UPI0000397FA3 Length = 181 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 102/140 (72%), Positives = 125/140 (89%) Query: 38 AMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSP 97 A+GMG+ATTFV+T+AS+ A+L++T++LIPL +LRTL FILVIAV+VQ TEM+V KTSP Sbjct: 1 AIGMGMATTFVLTVASLSAYLVETYVLIPLEAQFLRTLVFILVIAVIVQLTEMIVHKTSP 60 Query: 98 VLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRER 157 LYRLLGI+LPLITTNCAVLGVALLN+NL +N ++S LYGF AA+GFSLV+VLFAA+RER Sbjct: 61 TLYRLLGIYLPLITTNCAVLGVALLNVNLSNNLVESVLYGFGAALGFSLVLVLFAALRER 120 Query: 158 LAVADVPAPFRGNAIALITA 177 LA ADVP PF+G +IALITA Sbjct: 121 LAAADVPRPFQGASIALITA 140 >UniRef50_D1PJN2 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN2_9FIRM Length = 217 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 9/196 (4%) Query: 3 DYLLLFVGTVLVNNFVLVKFLGLCPFM-GVSKKLETAMGMGLATTFVMTLASICAW---- 57 D++ + N +L + LG+ + V L VMT+++ W Sbjct: 17 DFISYMGLAIFAENVILARALGVTRLLKLVPDHKAQVWDFSLPFILVMTISAPMGWAVHN 76 Query: 58 ----LIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTN 113 + ++ L + LR L ++ +V + T +++ + L L + Sbjct: 77 MLFPWLRNYLPAWLPVSALRPLIYLSCASVAMILTWLLLFVLPRRQRQACHAQLTLGGCS 136 Query: 114 CAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIA 173 AVLG L+ N + +QS +G +A+G+ ++ + R RL DVP+ F+G + Sbjct: 137 TAVLGTLLICANQNYTMMQSIAFGLGSALGYVFIIFIVREGRRRLRSKDVPSIFQGLPSS 196 Query: 174 LITAGLMSLAFMGFSG 189 LI G++SLA G G Sbjct: 197 LIYIGVLSLAIYGLVG 212 >UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE35_9CLOT Length = 205 Score = 106 bits (265), Expect = 5e-22, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 88/186 (47%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 + + + + + N V + LG + + +K + G+ T + +AS+ A+ I+ + Sbjct: 15 FFSMLILAIFLENTVFTRALGTSTVLLMLRKKANLLLFGVVLTLITVIASVLAFWINPLL 74 Query: 64 LIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLN 123 N Y+ + ++L+I++V +VV++ L L + L NCAV G LL Sbjct: 75 ADFPNKYYVTPIVYVLIISLVYVVALIVVKRLLKRLAEELVPMIHLSAFNCAVFGALLLA 134 Query: 124 INLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLA 183 + + +G + +GF+L ++ A L ++P FRG I +I G++SLA Sbjct: 135 NSYKMTLASTIGFGLGSGLGFTLAALMLAISYNYLNSDNIPKAFRGFPITMIYVGILSLA 194 Query: 184 FMGFSG 189 F G G Sbjct: 195 FYGLIG 200 >UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN4_9BACE Length = 193 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 78/154 (50%) Query: 36 ETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKT 95 +A+ MGL T +T + + W++ ++L P YL F+L+ A + ++ K Sbjct: 36 RSALAMGLTVTVGLTASMLLCWVVYAFLLSPFGAEYLEEAFFLLLTAGLAWLANRLMTKF 95 Query: 96 SPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIR 155 P L LP+ NCAVLG A+L + G + +GF++ ++F ++ Sbjct: 96 LPGKAEHLRQSLPMAAINCAVLGGAMLVSRSEVGLAPALRSGLLSGIGFTVAALVFVSVW 155 Query: 156 ERLAVADVPAPFRGNAIALITAGLMSLAFMGFSG 189 ER++ A VP F G IA+ AGL+ L +GF+G Sbjct: 156 ERVSYARVPKSFSGFPIAMAAAGLVLLTLLGFTG 189 >UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP92_9FIRM Length = 256 Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 15/189 (7%) Query: 8 FVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPL 67 + + N VL+ + P + + + + + LA + L + + I Sbjct: 23 LIDGLAKQNVVLMTGIVNAPVIIAATTFKKGVVIALAFAIISFLTIVTCSFVPKKI---- 78 Query: 68 NLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG 127 + LR + + LV +V T +++ + P+ L+GI++PLI TN + Sbjct: 79 -VYTLRVIIYALVGSVYYIPTVLLLEQIFPLTVELIGIYMPLIITNALIFSKTESRF-YL 136 Query: 128 HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVP---------APFRGNAIALITAG 178 + L+ + GF V VL RE + A F I G Sbjct: 137 EDKLKMIIDVIFFIAGFGAVCVLTGGFRELICFGTFAGIKLFDFKIAAFESPFGGFILVG 196 Query: 179 LMSLAFMGF 187 +M+ F Sbjct: 197 IMAGMFRAL 205 >UniRef50_B6G8I2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G8I2_9ACTN Length = 198 Score = 99.1 bits (246), Expect = 7e-20, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 5/192 (2%) Query: 4 YLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWI 63 +L L NN V + +G+ + V+ + + + G +A W + T + Sbjct: 3 FLNALFTAALDNNLVFAQLIGMVSVVLVAGRPQDSFRFGAMIAVATAVAGAPGWPLYTQL 62 Query: 64 LIPLNLIYLRTLAFILV--IAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 + P + YL LA++LV +VV T + K+ RLL + P++ N AVL V+L Sbjct: 63 MQPWGVAYLAPLAYVLVSWAVIVVVATILGAGKSVAERERLLRV-CPIVACNAAVLAVSL 121 Query: 122 LNINLGHNFLQSALYG--FSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGL 179 N + A G A +G L +VLFA +R+R+ VPA RG I L+TA L Sbjct: 122 GNAAVADTLTWDAALGSSIGAGLGVLLAVVLFAFVRDRIDERLVPAALRGLPITLVTASL 181 Query: 180 MSLAFMGFSGLV 191 M+LAF G +G+ Sbjct: 182 MALAFTGVAGIA 193 >UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AC7 Length = 201 Score = 96.8 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 4/173 (2%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMG-VSKKLETAMGMGLATTFVMTLASICAWLI 59 M +Y L+ + TV + G+ G +++ + G G TTFV+TL+SIC++L Sbjct: 1 MKEYALILISTVPGKQLRAGEVPGVVSVYGGLAQAGDRHGGWGWLTTFVLTLSSICSYLA 60 Query: 60 DTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGV 119 + ++L PL L ++RT+AFILVIAVVVQF + P G +G Sbjct: 61 NEYLLAPLGLEFMRTIAFILVIAVVVQFHRDGDAQDQPDALSGAGHLSATDHHQLRCVGA 120 Query: 120 ALLNINLGHNFLQSALYGFSAAV--GFSLVMVLFAAIRERLAVADVPAPFRGN 170 + + + + S+ + + A+ A ER+AV+DVP G Sbjct: 121 SRCSTSRSNT-ASSSRHSTALALLPASPWCWCCLLASGERVAVSDVPGTLPGQ 172 >UniRef50_A8S6D2 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D2_9FIRM Length = 203 Score = 96.0 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 8/191 (4%) Query: 4 YLLLFVGTVLVNNFVLVKFLG---LCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 + + + N V + LG + +G + GM L T V+ + A+L Sbjct: 11 FFSYALLAIFAQNAVFTRALGVSRMVQLVGDDRTSSALFGMMLCITQVLV--APVAFLAG 68 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVR--KTSPVLYRLLGIFLPLITTNCAVLG 118 +I N LR L +I IAVV +V+ ++ P +LL I +PL N VLG Sbjct: 69 RFIAPLDNRAQLRPLVYIASIAVVCLAEHLVLWLLRSLPRRAQLLRI-VPLAALNSGVLG 127 Query: 119 VALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAG 178 L+ QS +G + +G+ L ++L R RL +P FRG I L+ G Sbjct: 128 TVLVERTQSFTLGQSLGFGLGSGLGYVLAVLLVTEARHRLRSKAIPKAFRGLPITLVYIG 187 Query: 179 LMSLAFMGFSG 189 +++LA GF+G Sbjct: 188 VLALAVYGFTG 198 >UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MZD9_HAEIN Length = 128 Score = 96.0 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 73/108 (67%), Positives = 87/108 (80%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 MT Y+LL +GT L+NNFVLVKFLGLCPFMGVSKK+ETA+GMGLAT FV+T+AS+CA+L+D Sbjct: 1 MTHYILLIIGTALINNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVD 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLP 108 +ILIPLN +LRTL FILVIAVVVQFTEM + K + FL Sbjct: 61 HYILIPLNATFLRTLVFILVIAVVVQFTEMAINKNKSNIISFTRHFLA 108 >UniRef50_UPI0001C372EF hypothetical protein RflaF_11025 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EF Length = 191 Score = 92.9 bits (230), Expect = 5e-18, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 7/186 (3%) Query: 9 VGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLN 68 + +L N +L + LG + + + T T+AS + +D ++ + Sbjct: 7 IIALLAANLILTQALGTSTMFIAASGRKNLVRTACVITLFTTVASAFTYFVDVFMPDSVR 66 Query: 69 LIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLG- 127 + Y + + L+I V+ V+ + ++ + NCAV+G Sbjct: 67 V-YATLICYTLIIGVLYALFLTVLYLFGREKFEAYKKYIHISAFNCAVMGTLFTISERAA 125 Query: 128 -----HNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 N + L G A VGF + + AA +L VPA FRG LI G++S+ Sbjct: 126 ADPSLRNTVTYFLNGLEAGVGFIIASLFLAAAFRKLNSEKVPASFRGYPAMLIYLGIISM 185 Query: 183 AFMGFS 188 A Sbjct: 186 AVYALK 191 >UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AE2 Length = 156 Score = 92.6 bits (229), Expect = 6e-18, Method: Composition-based stats. Identities = 49/92 (53%), Positives = 67/92 (72%), Gaps = 1/92 (1%) Query: 7 LFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIP 66 +F+ VL NNFVL FLGLCPF+GVS KL+TA+ MGLAT FVM ++S+CA+ I IL+ Sbjct: 9 IFLNAVLANNFVLALFLGLCPFLGVSGKLDTALPMGLATMFVMLVSSVCAFAI-NQILVT 67 Query: 67 LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPV 98 ++ +LR +A+I VIA VQ EM ++K +P Sbjct: 68 FDIEFLRLIAYIAVIASAVQLVEMTLKKFTPG 99 >UniRef50_A5VZI7 NADH:ubiquinone oxidoreductase subunit RnfA-like protein n=5 Tax=Pseudomonas RepID=A5VZI7_PSEP1 Length = 182 Score = 87.9 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 11/190 (5%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M DY+L+ + L+N+ L++ P G+ ++ GLA + L I A L+ Sbjct: 1 MNDYILVLISAALINHLCLLRQ----PLSGLQLQVH-----GLACALCIALGVIGAQLLV 51 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 +L PL + L + +A++ ++ K P + ++G+ L+ +N VLG+A Sbjct: 52 HAVLAPLQIHDLALFLLLPWLALLAWGLPWLLAKWRPA-WPVVGL-PALLLSNAVVLGLA 109 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM 180 L + + L G GF L +++FA +R+R A AD+P RG I LI AG+M Sbjct: 110 LQQTSDDGTWPTMLLQGLLTGGGFWLALMVFADLRQRSAHADIPNALRGLPIELIGAGVM 169 Query: 181 SLAFMGFSGL 190 ++A GF+G+ Sbjct: 170 AMALSGFNGM 179 >UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE36_9CLOT Length = 203 Score = 87.2 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 10/187 (5%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 ++ + +L N VL + L + P + ++ L+ A + LA + + + A I Sbjct: 4 KHLIVEKLKDLLYANMVLERGLLVAPVVVMAYNLKNAAALALAFAIITFVTVVFASFIPK 63 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVAL 121 I +R + ++V A++ + V + P L LGIFLPL+ TN V+ + Sbjct: 64 KI-----PYAVRVIFNVVVAALMFIPAALAVDQIQPGLVYKLGIFLPLLITNSLVIQKSE 118 Query: 122 LNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAI-ALITAGLM 180 + +GF++V+ L A+RE A G AI + TA + Sbjct: 119 TRFRKIPTKRGMIIDLIGHIIGFAIVICLVGALRELFGSAT----LWGKAIGSFQTAPAL 174 Query: 181 SLAFMGF 187 L F GF Sbjct: 175 LLPFSGF 181 >UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN3_9BACE Length = 240 Score = 83.7 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 6/159 (3%) Query: 5 LLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWIL 64 + LF + ++N ++ L + + S L +G GLA T V+ ++ ++ Sbjct: 43 VSLFRRGLALHNPAVILLLLVAAVLPCSATLPGGLGTGLAMTAVLVCTNLAGAILR---- 98 Query: 65 IPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNI 124 P+ LR +++ A ++ +V++ P L +FL N A+L Sbjct: 99 -PIASPALRIPCYLIAAAAILTAAGLVLQACFPGLTGCAPLFLLPAAVNAALLAR-RGAF 156 Query: 125 NLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + +A+ G +A VGF++ + + +A+RE L + Sbjct: 157 SRRFTPGYAAVDGLAAGVGFTIALTVLSALRELLGKGTL 195 >UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D1_9FIRM Length = 241 Score = 81.0 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 12/182 (6%) Query: 12 VLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIY 71 V +NN V+++ +GL P + V+ + + + A T ++ + + A L+ + + Sbjct: 22 VFLNNPVVMQGMGLAPLVVVATTGQNGLMLAAAVTLLLVPSRVLACLLSRLVPLRDEEPT 81 Query: 72 ---------LRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALL 122 R L + AVV ++ LGI+LP++ + Sbjct: 82 PEQLQKKLLPRALLYAASAAVVYLAAYPILNFVFGTGLLNLGIYLPMLVVEPLLTYR--- 138 Query: 123 NINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSL 182 + ++ G VG++L++++ +RE L++ V G L A + + Sbjct: 139 FGRVQETVHKAVSKGVRITVGYALLLLVVGVVREWLSLGTVFGAPVGRWALLPLAKMPAG 198 Query: 183 AF 184 F Sbjct: 199 GF 200 >UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C280_9GAMM Length = 94 Score = 73.7 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 51/94 (54%), Positives = 68/94 (72%), Gaps = 2/94 (2%) Query: 2 TDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDT 61 + L +F+ +LVNNFV FLGLCPF GVS KLETA +GLA+TFVM + +IC W ++T Sbjct: 3 SQLLWIFISALLVNNFVFSYFLGLCPFFGVSGKLETAFRLGLASTFVMLITAICTWFLNT 62 Query: 62 WILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKT 95 +IL + YLR ++FI+VIA VQF EMV++K Sbjct: 63 YIL--IYAPYLRLISFIVVIASTVQFVEMVIKKI 94 >UniRef50_B0P6D1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D1_9FIRM Length = 191 Score = 71.0 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 64/147 (43%), Gaps = 8/147 (5%) Query: 35 LETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRK 94 + T++ ++ + ++ + + L+ + L L + +A++V +++ Sbjct: 9 ITTSLKNSVSISILLACSLVPTVLLASLAGARLPRWGAPILYTLFSLALIVACVPLILP- 67 Query: 95 TSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAI 154 SP + LGIF+PL++ N +L + + + + + S + GF+L+M L A + Sbjct: 68 ISPEVADSLGIFVPLLSVNTLLLTLCGRYADSRRKPVFALVDAVSYSAGFALIMCLLALL 127 Query: 155 RERLAVADV-------PAPFRGNAIAL 174 RE L ++ P G I Sbjct: 128 REWLGTGNIWGVPVRAPFTLSGIQITF 154 >UniRef50_D1NHP2 Electron transport complex protein rnfA n=1 Tax=Haemophilus influenzae HK1212 RepID=D1NHP2_HAEIN Length = 91 Score = 65.6 bits (159), Expect = 9e-10, Method: Composition-based stats. Identities = 48/67 (71%), Positives = 58/67 (86%) Query: 126 LGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFM 185 + N +S +YGF A++GFSLV+VLFAA+RERL AD+PA FRG+AIALITAGLMSLAFM Sbjct: 25 MADNLTESVVYGFGASLGFSLVLVLFAALRERLVTADIPATFRGSAIALITAGLMSLAFM 84 Query: 186 GFSGLVK 192 GF+GLVK Sbjct: 85 GFTGLVK 91 >UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EE Length = 204 Score = 62.1 bits (150), Expect = 9e-09, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 61/163 (37%), Gaps = 6/163 (3%) Query: 1 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60 M + +L +N +L + + P + ++ A+ + A + ++ I + Sbjct: 1 MNNRKNSVFDGILGDNIILSSLMVISPIIICGDSVKNALSLIYAFNSMTFISLIIGSFVP 60 Query: 61 TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA 120 I +R + + ++ ++V + P +GI+ PL+ N ++ + Sbjct: 61 KKI-----PYTIRIIIYAIISSLVFIPVRWFAVEFYPDSIHRIGIYYPLLAVNSLIVLQS 115 Query: 121 LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADV 163 + + +GF LVM+ A+RE A + Sbjct: 116 EAKF-YRMKKGRMIISLVFYIIGFDLVMLFTGAVREFFAYGTI 157 >UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W6_NATTJ Length = 86 Score = 42.5 bits (99), Expect = 0.007, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 33/104 (31%) Query: 90 MVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMV 149 M++ SP L + GIF+PLI TNC +L + + + ++V Sbjct: 1 MLLEAYSPALQKSRGIFVPLIVTNCLILERSEAFASKKKSVH---------------LLV 45 Query: 150 LFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL 193 + A++ I AG++S+AF GF G++ + Sbjct: 46 MLASV------------------PFIIAGVLSIAFTGFLGVILV 71 >UniRef50_UPI000150A5D9 ABC transporter family protein n=1 Tax=Tetrahymena thermophila RepID=UPI000150A5D9 Length = 1313 Score = 42.1 bits (98), Expect = 0.011, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Query: 46 TFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGI 105 F++T A++ + + + L F+ ++ V F M + + ++ L I Sbjct: 807 IFLLTFATMASSFLYGRMFSTFYEAVLGLPMFMFLVIFWVMFILMFMATATQDIWSLFQI 866 Query: 106 FLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVG 143 F PL+++ C V+ L+ + S + + G Sbjct: 867 F-PLVSSPCVVIFTGLITFLYKDGSVISNNFWLGQSTG 903 >UniRef50_B6G8I1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G8I1_9ACTN Length = 220 Score = 41.3 bits (96), Expect = 0.017, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 5/147 (3%) Query: 17 FVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLA 76 + G P + V+ E + +GL T + L + A L+ + + R Sbjct: 22 PTFLVVAGALPGLFVATSFENGLMIGLVTAAAIVLMASLAPLLRCFTSMWS-----RVPV 76 Query: 77 FILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALY 136 ++V VR +PV++ LGI+LPL+ N V + + Sbjct: 77 MLMVSVTAATLLGFAVRVANPVVFESLGIYLPLVAVNALVAAWIASDGLTVAPAKTPLMT 136 Query: 137 GFSAAVGFSLVMVLFAAIRERLAVADV 163 AA + I L V Sbjct: 137 AMFAAAMVLAALTFVGFINGMLTTGQV 163 >UniRef50_A6RHE5 Predicted protein n=15 Tax=Ajellomyces capsulatus NAm1 RepID=A6RHE5_AJECN Length = 1151 Score = 40.2 bits (93), Expect = 0.037, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 6/94 (6%) Query: 75 LAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSA 134 + + L++ V + V + P + IF+ I N V+GV L + G + Sbjct: 66 ICWTLIVLSAVHLILLTVHRPQPHRLPEISIFVLFICVNAVVIGVGLSGLRRGDT--PAF 123 Query: 135 LYGFSAAVGFSLVMVLFAAIRE-RLAVADVPAPF 167 Y F L + + IR+ ++ + Sbjct: 124 YYPLGICTAFPLALEM---IRQTKIQAGPLTNAL 154 >UniRef50_B0D6J2 Predicted protein n=2 Tax=Laccaria bicolor S238N-H82 RepID=B0D6J2_LACBS Length = 769 Score = 39.8 bits (92), Expect = 0.056, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 14/161 (8%) Query: 26 CPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVV 85 + K+ A+ MG ++T+ +++ D +L +N I IA ++ Sbjct: 571 VSLLVYFKERHYALAMGATFIALLTMYFPASYMEDYAVLHDVNPHLAFYALAITHIASLM 630 Query: 86 QFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFS 145 M + Y + +P A L + ++ + S YGFS+ S Sbjct: 631 GRIVMGL---LADKYGSFTLLIPTTVVLAASLCTVVSVQSVKAIVIVSIFYGFSSGAWLS 687 Query: 146 LVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMG 186 L++ A++ R I L T ++S+A +G Sbjct: 688 LLICGLASL-----------ALRPTEIGLRTGLVLSVASLG 717 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.320 0.160 0.435 Lambda K H 0.267 0.0491 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,227,225,179 Number of Sequences: 3077464 Number of extensions: 54708662 Number of successful extensions: 474934 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 283 Number of HSP's successfully gapped in prelim test: 600 Number of HSP's that attempted gapping in prelim test: 473479 Number of HSP's gapped (non-prelim): 1280 length of query: 193 length of database: 1,040,396,356 effective HSP length: 122 effective length of query: 71 effective length of database: 664,945,748 effective search space: 47211148108 effective search space used: 47211148108 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (20.7 bits) S2: 90 (39.0 bits)