200 c3qh4A_ Probab=99.09   E-value=1.2e-09  Score=71.65  Aligned_columns=244  Identities=17%

Q ss_pred             CCEEEEECCCCCEEEEEEEECCCC-CEEEEECCCCCCHHHHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCCCCCCCCH
Q ss_conf             431882038970499999934999-65999987899877899999999999848-9889995689999988754443326
Q batch____        17 SRFLNVEEAGKTLRIHFNDCGQGD-ETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGWGKSDSVVNSGSRS   94 (293)
Q Consensus        17 ~~~~~v~~~g~~~~i~y~~~G~g~-~~ivliHG~~~~~~~~~~~~~~l~~~~~~-g~~vi~~D~~G~G~s~~~~~~~~~~   94 (293)
                      .+..-...+|..+++....-..++ |.||++||++...............++.+ ||.|+.+|+|+...-..+.......
T Consensus        58 ~~~~~~~~~g~~i~~~v~~P~~~~~Pvii~~HGGg~~~~~~~~~~~~~~~~~~~~G~~V~~~~Yrl~p~~~~~~~~~d~~  137 (314)
T c3qh4A_          58 ADDVVTGEAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAI  137 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH
T ss_conf             68998579997799999847889871999972766415764311589999998679799996387432222122389999


Q ss_pred             HHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH
Q ss_conf             89999899864102355201101222210012210011223342033225777654322001788999999862012578
Q batch____        95 DLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIEN  174 (293)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (293)
                      ...........................+....................................................
T Consensus       138 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (314)
T c3qh4A_         138 EVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRSEFRATPAFDGEAAS  217 (314)
T ss_dssp             HHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHHHHTTTCSSSCHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             98875322333102222321123321111026788887520376443203420344465655543224567556768888


Q ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCC--HHHH
Q ss_conf             99878763147322898999999987411520356678887521101310157775318966999967888268--9999
Q batch____       175 LKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVP--MDAG  252 (293)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~  252 (293)
                      ...............                                .........+...|+++++|+.|..++  .+..
T Consensus       218 ~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~pp~li~~g~~D~~~~~~~~~~  265 (314)
T c3qh4A_         218 LMWRHYLAGQTPSPE--------------------------------SVPGRRGQLAGLPATLITCGEIDPFRDEVLDYA  265 (314)
T ss_dssp             HHHHHHHTTCCCCTT--------------------------------TCGGGCSCCTTCCCEEEEEEEESTTHHHHHHHH
T ss_pred             HHHHCCCCCCCCCCC--------------------------------CCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHH
T ss_conf             754224677554610--------------------------------076201110588639998479972016899999


Q ss_pred             HHHHHHCCCCEEEEECCCCCCHH-----HHCHHHHHHHHHHHHCC
Q ss_conf             99999689979999889964765-----72799999999998558
Q batch____       253 LRLLSGIAGSELHIFRDCGHWAQ-----WEHADAFNQLVLNFLAR  292 (293)
Q Consensus       253 ~~~~~~~~~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fL~r  292 (293)
                      +++.+.-..+++++++|.+|...     .+...++.+.+.+||.|
T Consensus       266 ~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~~~lr~  310 (314)
T c3qh4A_         266 QRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALAD  310 (314)
T ss_dssp             HHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCEEEEEECCCCEEHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf             999977996899998888520333078868999999999999988