Phyre 2 alignment of P77044 with c1w17A_

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Job Description | P77044
Confidence | 30.08% | Date | Thu Jan 5 12:25:30 GMT 2012
Rank | 285 | Aligned Residues | 32
% Identity | 25% | Template | c1w17A_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; | PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase.
Resolution | 1.9 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 43 | . | . | . | . |  | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | V | L | L | H | . | G | S | G | P | G | A | T | G | W | A | N | F | S | R | N | I | D | P | L | V | E | A | G | Y | R | V | I | L | L | D
Query Conservation |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | Y | L | L | H | T | V | S | R | D | N | A | E | A | L | D | D | A | I | T | D | L | K | . | . | . | K | Q | G | Y | T | F | K | S | I | D
Template Known Secondary structure |  |  |  |  |  |  | S |  | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |  |  |  | . | . | . | . | . | . | . | . | . | 250

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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