16/01/2012 19:10:25 : INFO  : Run start: Mon Jan 16 19:10:22 GMT 2012
16/01/2012 19:10:35 : INFO  : Initialised job
16/01/2012 19:10:39 : INFO  : Renaming log file 'phyre2_20120116_191021.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/5911fb25819b226b/phyre_20120116_191021.log'
16/01/2012 19:10:41 : INFO  : Initialised job:
Sequence
>batch____
MQEKMMSYQPQTEAATSRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFS
RNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSM
GGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMD
IFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVW
GRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNFLARP

16/01/2012 19:10:43 : INFO  : Checked sequence
16/01/2012 19:10:50 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 19:10:52 : INFO  : PSI-BLAST 3 iterations
16/01/2012 19:12:59 : INFO  : PSI-BLAST 5 iterations
16/01/2012 19:16:29 : INFO  : Finished PSI-BLAST
16/01/2012 19:16:34 : INFO  : Running Buildali to generate a3m file
16/01/2012 23:14:49 : INFO  : Converting to HMM
16/01/2012 23:15:21 : INFO  : Calibrating HMM
16/01/2012 23:15:45 : INFO  : Searching HMM database
16/01/2012 23:21:10 : INFO  : Finished buildali
16/01/2012 23:21:13 : INFO  : Predicting secondary structure
16/01/2012 23:21:28 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 23:21:31 : INFO  : Predicting Disordered regions
16/01/2012 23:21:39 : INFO  : Predicted Disorder (Disopred)
16/01/2012 23:21:42 : INFO  : Running memsat_svm check
16/01/2012 23:25:05 : INFO  : Globular protein
16/01/2012 23:25:07 : INFO  : Predicted Transmembrane (memsat_svm) ID '5911fb25819b226b'
16/01/2012 23:25:11 : INFO  : Initialising fold library search
16/01/2012 23:25:18 : INFO  : Initialised search input
16/01/2012 23:25:23 : INFO  : Building Ensemble models
16/01/2012 23:25:30 : INFO  : Building hh.c1u2eA_.model.1.pdb
16/01/2012 23:25:58 : INFO  : Building c1u2eA_.1.pdb
16/01/2012 23:26:25 : INFO  : Building d2rhwa1.2.pdb
16/01/2012 23:26:54 : INFO  : Building c1cr6A_.3.pdb
16/01/2012 23:27:22 : INFO  : Building c2vf2A_.4.pdb
16/01/2012 23:27:48 : INFO  : Building c3kdaB_.5.pdb
16/01/2012 23:28:14 : INFO  : Building d1uk8a_.6.pdb
16/01/2012 23:28:40 : INFO  : Building d1hkha_.7.pdb
16/01/2012 23:29:06 : INFO  : Building d1brta_.8.pdb
16/01/2012 23:29:32 : INFO  : Building d1b6ga_.9.pdb
16/01/2012 23:29:59 : INFO  : Building c3oosA_.10.pdb
16/01/2012 23:30:24 : INFO  : Building d1c4xa_.11.pdb
16/01/2012 23:30:52 : INFO  : Building c3u1tA_.12.pdb
16/01/2012 23:31:18 : INFO  : Building d1va4a_.13.pdb
16/01/2012 23:31:44 : INFO  : Building d1zd3a2.14.pdb
16/01/2012 23:32:11 : INFO  : Building c2vavL_.15.pdb
16/01/2012 23:32:38 : INFO  : Building c2xt0A_.16.pdb
16/01/2012 23:33:06 : INFO  : Building d1a8sa_.17.pdb
16/01/2012 23:33:34 : INFO  : Building d1q0ra_.18.pdb
16/01/2012 23:34:02 : INFO  : Building d1ehya_.19.pdb
16/01/2012 23:34:30 : INFO  : Building c3kxpD_.20.pdb
16/01/2012 23:35:30 : INFO  : Finished HH model building
16/01/2012 23:35:33 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 23:36:36 : INFO  : html domain output complete ID '5911fb25819b226b'
17/01/2012 00:34:27 : INFO  : Run end  : Tue Jan 17 00:34:25 GMT 2012
