Job Description P76011 Confidence 4.29% Date Thu Jan 5 12:17:22 GMT 2012 Rank 22 Aligned Residues 83 % Identity 20% Template c3c1iA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonia channel; PDBTitle: substrate binding, deprotonation and selectivity at the2 periplasmic entrance of the e. coli ammonia channel amtb Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.													.
Query SS confidence																																						.													.
Query Sequence		M	G	I	I	A	W	I	I	F	D	L	I	A	G	I	I	A	K	L	I	M	P	G	R	D	G	G	G	F	F	L	T	C	I	L	G	.	I	V	G	A	V	V	G	G	W	L	A	T	.	M	F	G	I	G	G	S	I	S	G	F	N	L	H	S	F	L	V	A	V	V	G	A	I	L	V	L	G	I	F
Query Conservation																																						.													.
Alig confidence																																						.													.
Template Conservation
Template Sequence		I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	L	W	G	V	T	M	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	M	T	G	I	F	A	A	S	S	L	G	G	V	G	F	A	E	G	V	T	M	G	H	Q	L	L	V	Q	L	E	S	I	A	I	T	I	V	W
Template Known Secondary structure		S																									G	G	G																				T	S	G	G	G	T	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		79	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	V	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions