14/01/2012 18:55:26 : INFO  : Run start: Sat Jan 14 18:55:25 GMT 2012
14/01/2012 18:55:31 : INFO  : Initialised job
14/01/2012 18:55:33 : INFO  : Renaming log file 'phyre2_20120114_185524.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/58c6133f13623dbd/phyre_20120114_185524.log'
14/01/2012 18:55:34 : INFO  : Initialised job:
Sequence
>batch____
MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFA
RLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVASWRDAGLTGI
NVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNW
IQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHP
DYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARI
SAALREKKQTHFLHQNNTGITQNLSYIGG

14/01/2012 18:55:36 : INFO  : Checked sequence
14/01/2012 18:55:39 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 18:55:40 : INFO  : PSI-BLAST 3 iterations
14/01/2012 18:57:34 : INFO  : PSI-BLAST 5 iterations
14/01/2012 19:00:17 : INFO  : Finished PSI-BLAST
14/01/2012 19:00:20 : INFO  : Running Buildali to generate a3m file
14/01/2012 19:20:23 : INFO  : Converting to HMM
14/01/2012 19:20:30 : INFO  : Calibrating HMM
14/01/2012 19:20:50 : INFO  : Searching HMM database
14/01/2012 19:28:23 : INFO  : Finished buildali
14/01/2012 19:28:24 : INFO  : Predicting secondary structure
14/01/2012 19:28:30 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 19:28:31 : INFO  : Predicting Disordered regions
14/01/2012 19:28:35 : INFO  : Predicted Disorder (Disopred)
14/01/2012 19:28:36 : INFO  : Running memsat_svm check
14/01/2012 19:31:38 : INFO  : Globular protein
14/01/2012 19:31:39 : INFO  : Predicted Transmembrane (memsat_svm) ID '58c6133f13623dbd'
14/01/2012 19:31:40 : INFO  : Initialising fold library search
14/01/2012 19:31:42 : INFO  : Initialised search input
14/01/2012 19:31:44 : INFO  : Building Ensemble models
14/01/2012 19:31:48 : INFO  : Building hh.d1tv8a_.model.1.pdb
14/01/2012 19:32:00 : INFO  : Building d1tv8a_.1.pdb
14/01/2012 19:32:12 : INFO  : Building c2yx0A_.2.pdb
14/01/2012 19:32:23 : INFO  : Building c3c8fA_.3.pdb
14/01/2012 19:32:34 : INFO  : Building c1r30A_.4.pdb
14/01/2012 19:32:46 : INFO  : Building d1r30a_.5.pdb
14/01/2012 19:32:56 : INFO  : Building c3t7vA_.6.pdb
14/01/2012 19:33:07 : INFO  : Building c2a5hC_.7.pdb
14/01/2012 19:33:19 : INFO  : Building c3cixA_.8.pdb
14/01/2012 19:33:31 : INFO  : Building c3rfaA_.9.pdb
14/01/2012 19:33:42 : INFO  : Building c2z2uA_.10.pdb
14/01/2012 19:33:54 : INFO  : Building d1olta_.11.pdb
14/01/2012 19:34:06 : INFO  : Building c3canA_.12.pdb
14/01/2012 19:34:16 : INFO  : Building c2qgqF_.13.pdb
14/01/2012 19:34:28 : INFO  : Building c3ivuB_.14.pdb
14/01/2012 19:34:41 : INFO  : Building c3eegB_.15.pdb
14/01/2012 19:34:52 : INFO  : Building c3ewbX_.16.pdb
14/01/2012 19:35:04 : INFO  : Building c2ftpA_.17.pdb
14/01/2012 19:35:15 : INFO  : Building c1nvmG_.18.pdb
14/01/2012 19:35:29 : INFO  : Building c2cw6B_.19.pdb
14/01/2012 19:35:40 : INFO  : Building c3bleA_.20.pdb
14/01/2012 19:36:12 : INFO  : Finished HH model building
14/01/2012 19:36:14 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 19:37:05 : INFO  : html domain output complete ID '58c6133f13623dbd'
14/01/2012 20:26:16 : INFO  : Run end  : Sat Jan 14 20:26:15 GMT 2012
